BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042766
(914 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 259/584 (44%), Gaps = 70/584 (11%)
Query: 41 LLAIKSQLHDPSGVTSSWNNTMNFCQWTGVTCGHRHQRLTELNLSSQRIGGVLSPY---- 96
L++ K L D + + W++ N C + GVTC R ++T ++LSS+ + S
Sbjct: 14 LISFKDVLPDKN-LLPDWSSNKNPCTFDGVTC--RDDKVTSIDLSSKPLNVGFSAVSSSL 70
Query: 97 ----VGNLSFL--RYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSG--TIPTNLSRC 148
FL +IN + +GF+ L L LS NS SG T T+L C
Sbjct: 71 LSLTGLESLFLSNSHINGSVSGFKCSA--------SLTSLDLSRNSLSGPVTTLTSLGSC 122
Query: 149 SNLIHFCASNNKLEGQIPKEIGNLLKLQRLSV---DINYLTGQ------LPDSVGNLSA- 198
S L S+N L+ P ++ LKL L V N ++G L D G L
Sbjct: 123 SGLKFLNVSSNTLD--FPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHL 180
Query: 199 ------------------IEVIRITENSLGGKIPXXXXXXXXXXXXXXAENQFSGMFPRS 240
+E + ++ N+ IP N+ SG F R+
Sbjct: 181 AISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISG-NKLSGDFSRA 239
Query: 241 ICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASN-LELL 299
I + ++L+ ++ N+F G P L L +L+ L + N F G IPD LS A + L L
Sbjct: 240 ISTCTELKLLNISSNQFVGPIP---PLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGL 296
Query: 300 DLPSNQFKGKVSIDFSSXXXXXXXXXXXXXXGTGTANDLDFVIFLSNCSSLKVLSLSDNQ 359
DL N F G V F S D L LKVL LS N+
Sbjct: 297 DLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDT-----LLKMRGLKVLDLSFNE 351
Query: 360 FGGELPHSIANLSLKMIELSVGRNQISGTIPPGI-RNLVN-LITFTLEVNQFHGTIPDVI 417
F GELP S+ NLS ++ L + N SG I P + +N N L L+ N F G IP +
Sbjct: 352 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 411
Query: 418 SELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIAS 477
S L L + N+L G IPS LG+L+KL L L N L+G IP L + L I
Sbjct: 412 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 471
Query: 478 YNKLTGDLPQQLLSITTXXXXXXXXXXXXXXXXXXQVGNLKNLVMLDISSNQFSGVIPVT 537
+N LTG++P LS T +G L+NL +L +S+N FSG IP
Sbjct: 472 FNDLTGEIPSG-LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 530
Query: 538 LSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGK 581
L C SL +LD++ N F G IP + F +S K +++N ++GK
Sbjct: 531 LGDCRSLIWLDLNTNLFNGTIPAAM-FKQSGK---IAANFIAGK 570
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 180/381 (47%), Gaps = 25/381 (6%)
Query: 103 LRYINLADNGFRGDIPQEIGNL-FRLEKLALSNNSFSGTIPTNLSRCSN----LIHFCAS 157
L+ ++L+ N F G++P+ + NL L L LS+N+FSG I NL C N L
Sbjct: 342 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL--CQNPKNTLQELYLQ 399
Query: 158 NNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPXXX 217
NN G+IP + N +L L + NYL+G +P S+G+LS + +++ N L G+IP
Sbjct: 400 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 459
Query: 218 XXXXXXXXXXXAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGI 277
N +G P + N +++ I L+ NR +G P + L NL L +
Sbjct: 460 MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP-KWIGRLENLAILKL 518
Query: 278 GGNNFVGSIPDSLSNASNLELLDLPSNQF-----------KGKVSIDF-SSXXXXXXXXX 325
N+F G+IP L + +L LDL +N F GK++ +F +
Sbjct: 519 SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKND 578
Query: 326 XXXXXGTGTANDLDFVIF----LSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVG 381
G N L+F L+ S+ +++ +GG + N + M+ L +
Sbjct: 579 GMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDN-NGSMMFLDMS 637
Query: 382 RNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGL 441
N +SG IP I ++ L L N G+IPD + +L+ L L + +N L G IP +
Sbjct: 638 YNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAM 697
Query: 442 GNLTKLGSLDLGSNSLQGNIP 462
LT L +DL +N+L G IP
Sbjct: 698 SALTMLTEIDLSNNNLSGPIP 718
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 147/550 (26%), Positives = 242/550 (44%), Gaps = 76/550 (13%)
Query: 68 TGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRL 127
TG+ L L++S ++ G S + + L+ +N++ N F G IP L L
Sbjct: 211 TGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSL 268
Query: 128 EKLALSNNSFSGTIPTNLS-RCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLT 186
+ L+L+ N F+G IP LS C L S N G +P G+ L+ L++ N +
Sbjct: 269 QYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFS 328
Query: 187 GQLP-DSVGNLSAIEVIRITENSLGGKIPXXXXXXXXXXXXXX-AENQFSGMFPRSICN- 243
G+LP D++ + ++V+ ++ N G++P + N FSG ++C
Sbjct: 329 GELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQN 388
Query: 244 -ISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLP 302
++++ ++L N F+G P L N L L + N G+IP SL + S L L L
Sbjct: 389 PKNTLQELYLQNNGFTGKIP-PTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 447
Query: 303 SNQFKGKVSIDFSSXXXXXXXXXXXXXXGTGTANDLDFVI--FLSNCSSLKVLSLSDNQF 360
N +G++ + NDL I LSNC++L +SLS+N+
Sbjct: 448 LNMLEGEIPQELMYVKTLETLILDF--------NDLTGEIPSGLSNCTNLNWISLSNNRL 499
Query: 361 GGELPHSIANL-SLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISE 419
GE+P I L +L +++LS N SG IP + + +LI L N F+GTIP + +
Sbjct: 500 TGEIPKWIGRLENLAILKLS--NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 557
Query: 420 LKNLQQLSVFNNFLRG---------GIPS---GLGNLTKLGSL--------------DLG 453
Q + NF+ G G+ G GNL + + ++
Sbjct: 558 ----QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNIT 613
Query: 454 SNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTXXXXXXXXXXXXXXXXXXQ 513
S G+ + N +++ SYN L+G +P++
Sbjct: 614 SRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKE------------------------- 648
Query: 514 VGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNV 573
+G++ L +L++ N SG IP + L LD+S N G IP + L + +++
Sbjct: 649 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 708
Query: 574 SSNNLSGKIP 583
S+NNLSG IP
Sbjct: 709 SNNNLSGPIP 718
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 165/371 (44%), Gaps = 44/371 (11%)
Query: 244 ISSVELIFLTENRFSGIFPFDILLN--LPNLKKLGIGGNNFVGSIPDSLSNASNLELLDL 301
++S+E++ L+ N SG +L+ LK L I GN G + +S NLE LD+
Sbjct: 147 LNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDV 204
Query: 302 PSNQFKGKVSIDFSSXXXXXXXXXXXXXXGTGTANDLDFVIFLSNCSSLKVLSLSDNQFG 361
SN F TG + FL +CS+L+ L +S N+
Sbjct: 205 SSNNFS------------------------TG-------IPFLGDCSALQHLDISGNKLS 233
Query: 362 GELPHSIANLS-LKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVIS-E 419
G+ +I+ + LK++ +S NQ G IPP L +L +L N+F G IPD +S
Sbjct: 234 GDFSRAISTCTELKLLNIS--SNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGA 289
Query: 420 LKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIP-SSLGNCQNLILFIASY 478
L L + N G +P G+ + L SL L SN+ G +P +L + L + S+
Sbjct: 290 CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSF 349
Query: 479 NKLTGDLPQQLLSITTXXXXXXXXXXXXXXXXXXQV-GNLKN-LVMLDISSNQFSGVIPV 536
N+ +G+LP+ L +++ + N KN L L + +N F+G IP
Sbjct: 350 NEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPP 409
Query: 537 TLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPXXXXXXXXXXXXX 596
TLS C L L +S N G IP S L ++ L + N L G+IP
Sbjct: 410 TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 469
Query: 597 XXYNYFEGEVP 607
+N GE+P
Sbjct: 470 LDFNDLTGEIP 480
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 258/584 (44%), Gaps = 70/584 (11%)
Query: 41 LLAIKSQLHDPSGVTSSWNNTMNFCQWTGVTCGHRHQRLTELNLSSQRIGGVLSPY---- 96
L++ K L D + W++ N C + GVTC R ++T ++LSS+ + S
Sbjct: 17 LISFKDVLPD-KNLLPDWSSNKNPCTFDGVTC--RDDKVTSIDLSSKPLNVGFSAVSSSL 73
Query: 97 ----VGNLSFL--RYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSG--TIPTNLSRC 148
FL +IN + +GF+ L L LS NS SG T T+L C
Sbjct: 74 LSLTGLESLFLSNSHINGSVSGFKCSA--------SLTSLDLSRNSLSGPVTTLTSLGSC 125
Query: 149 SNLIHFCASNNKLEGQIPKEIGNLLKLQRLSV---DINYLTGQ------LPDSVGNLSA- 198
S L S+N L+ P ++ LKL L V N ++G L D G L
Sbjct: 126 SGLKFLNVSSNTLD--FPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHL 183
Query: 199 ------------------IEVIRITENSLGGKIPXXXXXXXXXXXXXXAENQFSGMFPRS 240
+E + ++ N+ IP N+ SG F R+
Sbjct: 184 AISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISG-NKLSGDFSRA 242
Query: 241 ICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASN-LELL 299
I + ++L+ ++ N+F G P L L +L+ L + N F G IPD LS A + L L
Sbjct: 243 ISTCTELKLLNISSNQFVGPIP---PLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGL 299
Query: 300 DLPSNQFKGKVSIDFSSXXXXXXXXXXXXXXGTGTANDLDFVIFLSNCSSLKVLSLSDNQ 359
DL N F G V F S D L LKVL LS N+
Sbjct: 300 DLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDT-----LLKMRGLKVLDLSFNE 354
Query: 360 FGGELPHSIANLSLKMIELSVGRNQISGTIPPGI-RNLVN-LITFTLEVNQFHGTIPDVI 417
F GELP S+ NLS ++ L + N SG I P + +N N L L+ N F G IP +
Sbjct: 355 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 414
Query: 418 SELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIAS 477
S L L + N+L G IPS LG+L+KL L L N L+G IP L + L I
Sbjct: 415 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 474
Query: 478 YNKLTGDLPQQLLSITTXXXXXXXXXXXXXXXXXXQVGNLKNLVMLDISSNQFSGVIPVT 537
+N LTG++P LS T +G L+NL +L +S+N FSG IP
Sbjct: 475 FNDLTGEIPSG-LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 533
Query: 538 LSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGK 581
L C SL +LD++ N F G IP + F +S K +++N ++GK
Sbjct: 534 LGDCRSLIWLDLNTNLFNGTIPAAM-FKQSGK---IAANFIAGK 573
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 180/381 (47%), Gaps = 25/381 (6%)
Query: 103 LRYINLADNGFRGDIPQEIGNL-FRLEKLALSNNSFSGTIPTNLSRCSN----LIHFCAS 157
L+ ++L+ N F G++P+ + NL L L LS+N+FSG I NL C N L
Sbjct: 345 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL--CQNPKNTLQELYLQ 402
Query: 158 NNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPXXX 217
NN G+IP + N +L L + NYL+G +P S+G+LS + +++ N L G+IP
Sbjct: 403 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 462
Query: 218 XXXXXXXXXXXAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGI 277
N +G P + N +++ I L+ NR +G P + L NL L +
Sbjct: 463 MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP-KWIGRLENLAILKL 521
Query: 278 GGNNFVGSIPDSLSNASNLELLDLPSNQF-----------KGKVSIDF-SSXXXXXXXXX 325
N+F G+IP L + +L LDL +N F GK++ +F +
Sbjct: 522 SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKND 581
Query: 326 XXXXXGTGTANDLDFVIF----LSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVG 381
G N L+F L+ S+ +++ +GG + N + M+ L +
Sbjct: 582 GMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDN-NGSMMFLDMS 640
Query: 382 RNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGL 441
N +SG IP I ++ L L N G+IPD + +L+ L L + +N L G IP +
Sbjct: 641 YNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAM 700
Query: 442 GNLTKLGSLDLGSNSLQGNIP 462
LT L +DL +N+L G IP
Sbjct: 701 SALTMLTEIDLSNNNLSGPIP 721
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 147/550 (26%), Positives = 242/550 (44%), Gaps = 76/550 (13%)
Query: 68 TGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRL 127
TG+ L L++S ++ G S + + L+ +N++ N F G IP L L
Sbjct: 214 TGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSL 271
Query: 128 EKLALSNNSFSGTIPTNLS-RCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLT 186
+ L+L+ N F+G IP LS C L S N G +P G+ L+ L++ N +
Sbjct: 272 QYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFS 331
Query: 187 GQLP-DSVGNLSAIEVIRITENSLGGKIPXXXXXXXXXXXXXX-AENQFSGMFPRSICN- 243
G+LP D++ + ++V+ ++ N G++P + N FSG ++C
Sbjct: 332 GELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQN 391
Query: 244 -ISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLP 302
++++ ++L N F+G P L N L L + N G+IP SL + S L L L
Sbjct: 392 PKNTLQELYLQNNGFTGKIP-PTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 450
Query: 303 SNQFKGKVSIDFSSXXXXXXXXXXXXXXGTGTANDLDFVI--FLSNCSSLKVLSLSDNQF 360
N +G++ + NDL I LSNC++L +SLS+N+
Sbjct: 451 LNMLEGEIPQELMYVKTLETLILDF--------NDLTGEIPSGLSNCTNLNWISLSNNRL 502
Query: 361 GGELPHSIANL-SLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISE 419
GE+P I L +L +++LS N SG IP + + +LI L N F+GTIP + +
Sbjct: 503 TGEIPKWIGRLENLAILKLS--NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 560
Query: 420 LKNLQQLSVFNNFLRG---------GIPS---GLGNLTKLGSL--------------DLG 453
Q + NF+ G G+ G GNL + + ++
Sbjct: 561 ----QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNIT 616
Query: 454 SNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTXXXXXXXXXXXXXXXXXXQ 513
S G+ + N +++ SYN L+G +P++
Sbjct: 617 SRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKE------------------------- 651
Query: 514 VGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNV 573
+G++ L +L++ N SG IP + L LD+S N G IP + L + +++
Sbjct: 652 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711
Query: 574 SSNNLSGKIP 583
S+NNLSG IP
Sbjct: 712 SNNNLSGPIP 721
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 165/371 (44%), Gaps = 44/371 (11%)
Query: 244 ISSVELIFLTENRFSGIFPFDILLN--LPNLKKLGIGGNNFVGSIPDSLSNASNLELLDL 301
++S+E++ L+ N SG +L+ LK L I GN G + +S NLE LD+
Sbjct: 150 LNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDV 207
Query: 302 PSNQFKGKVSIDFSSXXXXXXXXXXXXXXGTGTANDLDFVIFLSNCSSLKVLSLSDNQFG 361
SN F TG + FL +CS+L+ L +S N+
Sbjct: 208 SSNNFS------------------------TG-------IPFLGDCSALQHLDISGNKLS 236
Query: 362 GELPHSIANLS-LKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVIS-E 419
G+ +I+ + LK++ +S NQ G IPP L +L +L N+F G IPD +S
Sbjct: 237 GDFSRAISTCTELKLLNIS--SNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGA 292
Query: 420 LKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIP-SSLGNCQNLILFIASY 478
L L + N G +P G+ + L SL L SN+ G +P +L + L + S+
Sbjct: 293 CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSF 352
Query: 479 NKLTGDLPQQLLSITTXXXXXXXXXXXXXXXXXXQV-GNLKN-LVMLDISSNQFSGVIPV 536
N+ +G+LP+ L +++ + N KN L L + +N F+G IP
Sbjct: 353 NEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPP 412
Query: 537 TLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPXXXXXXXXXXXXX 596
TLS C L L +S N G IP S L ++ L + N L G+IP
Sbjct: 413 TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 472
Query: 597 XXYNYFEGEVP 607
+N GE+P
Sbjct: 473 LDFNDLTGEIP 483
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 104/198 (52%), Gaps = 14/198 (7%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
S EL A+ FS+ N++G+G FG VYKG L D +V ++ + +G F +E E
Sbjct: 29 SLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEM 88
Query: 756 LRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQR 815
+ HRNL+++ C + + LV+ YM NGS+ L + + L +R
Sbjct: 89 ISMAVHRNLLRLRGFCMTPTE-----RLLVYPYMANGSVASCLRERPESQP--PLDWPKR 141
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIAS 875
IA+ A + YLH HC P ++H D+K +N+LLD + A VGDFGLAK +
Sbjct: 142 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-------Y 194
Query: 876 KTPSSSIGIKGTVGYVAP 893
K ++GT+G++AP
Sbjct: 195 KDXHVXXAVRGTIGHIAP 212
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 14/198 (7%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
S EL A+ F + N++G+G FG VYKG L D +V ++ + +G F +E E
Sbjct: 21 SLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEM 80
Query: 756 LRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQR 815
+ HRNL+++ C + + LV+ YM NGS+ L + + L +R
Sbjct: 81 ISMAVHRNLLRLRGFCMTPTE-----RLLVYPYMANGSVASCLRERPESQP--PLDWPKR 133
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIAS 875
IA+ A + YLH HC P ++H D+K +N+LLD + A VGDFGLAK +
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-------Y 186
Query: 876 KTPSSSIGIKGTVGYVAP 893
K ++G +G++AP
Sbjct: 187 KDXHVXXAVRGXIGHIAP 204
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 108/213 (50%), Gaps = 27/213 (12%)
Query: 691 LFPMVSY----AELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS 746
L P SY +L +AT+ F +IG G FG VYKG+L D VA+K +
Sbjct: 21 LVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK-VALKRRTPESSQGI 79
Query: 747 KSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE 806
+ F +E E L RH +L+ +I C + E + L+++YMENG+L+ L+ S+ +
Sbjct: 80 EEFETEIETLSFCRHPHLVSLIGFCDERN-EMI----LIYKYMENGNLKRHLYGSD--LP 132
Query: 807 VRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-- 864
+S QR+ I I A + YLH ++H D+K N+LLD + V + DFG++K
Sbjct: 133 TMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKG 189
Query: 865 -FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF 896
L HL +KGT+GY+ P F
Sbjct: 190 TELDQTHLXXV---------VKGTLGYIDPEYF 213
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 108/213 (50%), Gaps = 27/213 (12%)
Query: 691 LFPMVSY----AELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS 746
L P SY +L +AT+ F +IG G FG VYKG+L D VA+K +
Sbjct: 21 LVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK-VALKRRTPESSQGI 79
Query: 747 KSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE 806
+ F +E E L RH +L+ +I C + E + L+++YMENG+L+ L+ S+ +
Sbjct: 80 EEFETEIETLSFCRHPHLVSLIGFCDERN-EMI----LIYKYMENGNLKRHLYGSD--LP 132
Query: 807 VRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-- 864
+S QR+ I I A + YLH ++H D+K N+LLD + V + DFG++K
Sbjct: 133 TMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKG 189
Query: 865 -FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF 896
L HL +KGT+GY+ P F
Sbjct: 190 TELGQTHLXXV---------VKGTLGYIDPEYF 213
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 110/228 (48%), Gaps = 41/228 (17%)
Query: 681 KSVDTSPMEKLFPMVSYAELSKATSEFSSS------NMIGQGRFGTVYKGILGDDEMVVA 734
KS++ S + F S+ EL T+ F N +G+G FG VYKG + + VA
Sbjct: 3 KSLEVS--DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN--TTVA 58
Query: 735 VK----VINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYME 790
VK ++++ + + F E + + +H NL++++ S +G D LV+ YM
Sbjct: 59 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS----DGDDL-CLVYVYMP 113
Query: 791 NGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH--HHCQPPMVHGDLKPSNVL 848
NGSL D L + LS R IA A+ I +LH HH +H D+K +N+L
Sbjct: 114 NGSLLDRLSCLDG---TPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANIL 165
Query: 849 LDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSI---GIKGTVGYVAP 893
LD A + DFGLA+ AS+ + ++ I GT Y+AP
Sbjct: 166 LDEAFTAKISDFGLAR---------ASEKFAQTVMXXRIVGTTAYMAP 204
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 110/228 (48%), Gaps = 41/228 (17%)
Query: 681 KSVDTSPMEKLFPMVSYAELSKATSEFSSS------NMIGQGRFGTVYKGILGDDEMVVA 734
KS++ S + F S+ EL T+ F N +G+G FG VYKG + + VA
Sbjct: 3 KSLEVS--DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN--TTVA 58
Query: 735 VK----VINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYME 790
VK ++++ + + F E + + +H NL++++ S +G D LV+ YM
Sbjct: 59 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS----DGDDL-CLVYVYMP 113
Query: 791 NGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH--HHCQPPMVHGDLKPSNVL 848
NGSL D L + LS R IA A+ I +LH HH +H D+K +N+L
Sbjct: 114 NGSLLDRLSCLDG---TPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANIL 165
Query: 849 LDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSI---GIKGTVGYVAP 893
LD A + DFGLA+ AS+ + ++ I GT Y+AP
Sbjct: 166 LDEAFTAKISDFGLAR---------ASEKFAQTVMXSRIVGTTAYMAP 204
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 39/217 (17%)
Query: 692 FPMVSYAELSKATSEFSSS------NMIGQGRFGTVYKGILGDDEMVVAVK----VINLK 741
F S+ EL T+ F N +G+G FG VYKG + + VAVK ++++
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN--TTVAVKKLAAMVDIT 63
Query: 742 QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQS 801
+ + F E + + +H NL++++ S +G D LV+ YM NGSL D L
Sbjct: 64 TEELKQQFDQEIKVMAKCQHENLVELLGFSS----DGDDL-CLVYVYMPNGSLLDRLSCL 118
Query: 802 NDQVEVRKLSLIQRMNIAIDVASAIEYLH--HHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859
+ LS R IA A+ I +LH HH +H D+K +N+LLD A + D
Sbjct: 119 DG---TPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISD 170
Query: 860 FGLAKFLSNHHLDIASKTPSSSI---GIKGTVGYVAP 893
FGLA+ AS+ + + I GT Y+AP
Sbjct: 171 FGLAR---------ASEKFAQXVMXXRIVGTTAYMAP 198
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 125/301 (41%), Gaps = 42/301 (13%)
Query: 34 NETDRLALLAIKSQLHDPSGVTSSWNNTMNFCQ--WTGVTCGHRHQ--RLTELNLSSQR- 88
N D+ ALL IK L +P+ + SSW T + C W GV C Q R+ L+LS
Sbjct: 4 NPQDKQALLQIKKDLGNPTTL-SSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNL 62
Query: 89 --------------------IGGV------LSPYVGNLSFLRYINLADNGFRGDIPQEIG 122
IGG+ + P + L+ L Y+ + G IP +
Sbjct: 63 PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS 122
Query: 123 NLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKL-QRLSVD 181
+ L L S N+ SGT+P ++S NL+ N++ G IP G+ KL +++
Sbjct: 123 QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTIS 182
Query: 182 INYLTGQLPDSVGNLSAIEVIRITENSLGGKIPXXXXXXXXXXXXXXAENQFSGMFPRSI 241
N LTG++P + NL+ + + ++ N L G A+N + F
Sbjct: 183 RNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA--FDLGK 239
Query: 242 CNIS-SVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLD 300
+S ++ + L NR G P L L L L + NN G IP NL+ D
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTLP-QGLTQLKFLHSLNVSFNNLCGEIPQ----GGNLQRFD 294
Query: 301 L 301
+
Sbjct: 295 V 295
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 97/222 (43%), Gaps = 6/222 (2%)
Query: 364 LPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNL 423
+P S+ANL G N + G IPP I L L + G IPD +S++K L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 424 QQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIA-SYNKLT 482
L N L G +P + +L L + N + G IP S G+ L + S N+LT
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 483 GDLPQQLLSITTXXXXXXXXXXXXXXXXXXQVGNLKNLVMLDISSNQFS-GVIPVTLSTC 541
G +P ++ G+ KN + ++ N + + V LS
Sbjct: 188 GKIPPTFANLNLAFVDLSRNMLEGDASVL--FGSDKNTQKIHLAKNSLAFDLGKVGLSK- 244
Query: 542 VSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIP 583
+L LD+ N YG +P LK + +LNVS NNL G+IP
Sbjct: 245 -NLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 9/223 (4%)
Query: 266 LLNLPNLKKLGIGG-NNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSXXXXXXXX 324
L NLP L L IGG NN VG IP +++ + L L + G + DF S
Sbjct: 72 LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP-DFLSQIKTLVTL 130
Query: 325 XXXXXXGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQ 384
+GT +S+ +L ++ N+ G +P S + S +++ RN+
Sbjct: 131 DFSYNALSGT-----LPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNR 185
Query: 385 ISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNL 444
++G IPP NL NL L N G + KN Q++ + N L + +G
Sbjct: 186 LTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLS 243
Query: 445 TKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQ 487
L LDL +N + G +P L + L S+N L G++PQ
Sbjct: 244 KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 114/285 (40%), Gaps = 61/285 (21%)
Query: 165 IPKEIGNLLKLQRLSVD-INYLTGQLPDSVGNLSAIEVIRITENSLGGKIPXXXXXXXXX 223
IP + NL L L + IN L G +P ++ L+ + + IT ++ G I
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAI---------- 117
Query: 224 XXXXXAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFV 283
P + I ++ + + N SG P I +LPNL + GN
Sbjct: 118 --------------PDFLSQIKTLVTLDFSYNALSGTLPPSIS-SLPNLVGITFDGNRIS 162
Query: 284 GSIPDSLSNASNL-ELLDLPSNQFKGKVSIDFSSXXXXXXXXXXXXXXGTGTANDLDFVI 342
G+IPDS + S L + + N+ GK+ F++ G + V+
Sbjct: 163 GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDAS------VL 216
Query: 343 FLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITF 402
F S+ ++ K+ +L+ + +G+ +S NL
Sbjct: 217 FGSDKNTQKI-----------------HLAKNSLAFDLGKVGLSK----------NLNGL 249
Query: 403 TLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKL 447
L N+ +GT+P +++LK L L+V N L G IP G GNL +
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRF 293
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 534 IPVTLSTCVSLEYLDIS-INSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPXXXXXXXXX 592
IP +L+ L +L I IN+ G IP + L + L ++ N+SG IP
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 593 XXXXXXYNYFEGEVPVK-GVFSNKTKISLHGNVKLCGGIDE 632
YN G +P N I+ GN ++ G I +
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGN-RISGAIPD 167
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 92/193 (47%), Gaps = 24/193 (12%)
Query: 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRN--IRHRNLIKII 768
+IG+GR+G VYKG L DE VAVKV + + ++F++E R + H N+ + I
Sbjct: 19 ELIGRGRYGAVYKGSL--DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFI 73
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWL--HQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+G LV EY NGSL +L H S+ + +A V +
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD---------WVSSCRLAHSVTRGL 124
Query: 827 EYLH------HHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSS 880
YLH H +P + H DL NVL+ D + DFGL+ L+ + L + ++
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 881 SIGIKGTVGYVAP 893
+I GT+ Y+AP
Sbjct: 185 AISEVGTIRYMAP 197
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 102/202 (50%), Gaps = 22/202 (10%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSE 752
P +Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 2 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 60
Query: 753 CEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLS 811
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q EV +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPF------YIIIEFMTYGNLLDYLRECNRQ-EVNAVV 113
Query: 812 LIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHL 871
L+ +A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 114 LLY---MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT---- 163
Query: 872 DIASKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 164 ---GDTXTAHAGAKFPIKWTAP 182
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 29/187 (15%)
Query: 713 IGQGRFGTVYKGIL-GDDEMVVAVKVINLKQKGASK--SFVSECEALRNIRHRNLIKII- 768
IG G FGTV++ G D VAVK++ + A + F+ E ++ +RH N++ +
Sbjct: 45 IGAGSFGTVHRAEWHGSD---VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQS--NDQVEVRKLSLIQRMNIAIDVASAI 826
+ + ++V EY+ GSL LH+S +Q++ R+ R+++A DVA +
Sbjct: 102 AVTQPPNL------SIVTEYLSRGSLYRLLHKSGAREQLDERR-----RLSMAYDVAKGM 150
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKG 886
YLH+ PP+VH DLK N+L+D V DFGL++ ++ L S G
Sbjct: 151 NYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFL--------XSKXAAG 201
Query: 887 TVGYVAP 893
T ++AP
Sbjct: 202 TPEWMAP 208
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 29/187 (15%)
Query: 713 IGQGRFGTVYKGIL-GDDEMVVAVKVINLKQKGASK--SFVSECEALRNIRHRNLIKII- 768
IG G FGTV++ G D VAVK++ + A + F+ E ++ +RH N++ +
Sbjct: 45 IGAGSFGTVHRAEWHGSD---VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQS--NDQVEVRKLSLIQRMNIAIDVASAI 826
+ + ++V EY+ GSL LH+S +Q++ R+ R+++A DVA +
Sbjct: 102 AVTQPPNL------SIVTEYLSRGSLYRLLHKSGAREQLDERR-----RLSMAYDVAKGM 150
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKG 886
YLH+ PP+VH +LK N+L+D V DFGL++ ++ L SS G
Sbjct: 151 NYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL--------SSKSAAG 201
Query: 887 TVGYVAP 893
T ++AP
Sbjct: 202 TPEWMAP 208
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 34/208 (16%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK--SFVSECEALRNIRHRNLIKIITI 770
IG G FGTVYKG D VAVK++N+ + +F +E LR RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
+ A+V ++ E SL LH S + E++KL ++IA A ++YLH
Sbjct: 89 STKPQL------AIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH 137
Query: 831 HHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA----KFLSNHHLDIASKTPSSSIGIKG 886
++H DLK +N+ L D +GDFGLA ++ +H + S G
Sbjct: 138 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS----------G 184
Query: 887 TVGYVAPGKFFMLYTHIPSFSCTNVHHF 914
++ ++AP M ++ SF ++V+ F
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQ-SDVYAF 211
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 34/208 (16%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK--SFVSECEALRNIRHRNLIKIITI 770
IG G FGTVYKG D VAVK++N+ + +F +E LR RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
++ A+V ++ E SL LH S + E++KL ++IA A ++YLH
Sbjct: 89 STAPQL------AIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH 137
Query: 831 HHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA----KFLSNHHLDIASKTPSSSIGIKG 886
++H DLK +N+ L D +GDFGLA ++ +H + S G
Sbjct: 138 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS----------G 184
Query: 887 TVGYVAPGKFFMLYTHIPSFSCTNVHHF 914
++ ++AP M ++ SF ++V+ F
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQ-SDVYAF 211
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 34/208 (16%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK--SFVSECEALRNIRHRNLIKIITI 770
IG G FGTVYKG D VAVK++N+ + +F +E LR RH N++ +
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
+ A+V ++ E SL LH S + E++KL ++IA A ++YLH
Sbjct: 77 STKPQL------AIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH 125
Query: 831 HHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA----KFLSNHHLDIASKTPSSSIGIKG 886
++H DLK +N+ L D +GDFGLA ++ +H + S G
Sbjct: 126 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS----------G 172
Query: 887 TVGYVAPGKFFMLYTHIPSFSCTNVHHF 914
++ ++AP M ++ SF ++V+ F
Sbjct: 173 SILWMAPEVIRMQDSNPYSFQ-SDVYAF 199
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 98/190 (51%), Gaps = 22/190 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNL 764
++ + + +G G+FG VY+G+ + VAVK + + + F+ E ++ I+H NL
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 765 IKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVA 823
++++ +C+ F ++ E+M G+L D+L + N Q ++S + + +A ++
Sbjct: 70 VQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQIS 119
Query: 824 SAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIG 883
SA+EYL + +H DL N L+ + + V DFGL++ ++ T ++ G
Sbjct: 120 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTXTAHAG 169
Query: 884 IKGTVGYVAP 893
K + + AP
Sbjct: 170 AKFPIKWTAP 179
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 36/194 (18%)
Query: 712 MIGQGRFGTVYKGIL---GDDEMVVAVKVINLKQKGA-----SKSFVSECEALRNIRHRN 763
+IG G FG V +G L G E VA+K + KG + F+SE + H N
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTL----KGGYTERQRREFLSEASIMGQFEHPN 78
Query: 764 LIKIITICSSTDFEGVDFKAL----VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+I++ EGV ++ + E+MENG+L+ +L ++ Q ++IQ + +
Sbjct: 79 IIRL---------EGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-----FTVIQLVGML 124
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
+AS + YL + VH DL N+L++ ++V V DFGL++FL + D T +
Sbjct: 125 RGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD---PTET 178
Query: 880 SSIGIKGTVGYVAP 893
SS+G K + + AP
Sbjct: 179 SSLGGKIPIRWTAP 192
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 110/218 (50%), Gaps = 43/218 (19%)
Query: 696 SYAELSKATSEFSSS---------NMIGQGRFGTVYKGIL---GDDEMVVAVKVIN---- 739
++ + ++A EF+ +IG G FG V G L G E+ VA+K +
Sbjct: 15 TFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT 74
Query: 740 LKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA----LVFEYMENGSLE 795
KQ+ + F+SE + H N+I + EGV K+ ++ E+MENGSL+
Sbjct: 75 EKQR---RDFLSEASIMGQFDHPNVIHL---------EGVVTKSTPVMIITEFMENGSLD 122
Query: 796 DWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVA 855
+L Q++ Q ++IQ + + +A+ ++YL VH DL N+L++ ++V
Sbjct: 123 SFLRQNDGQ-----FTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVC 174
Query: 856 HVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
V DFGL++FL + D + T +S++G K + + AP
Sbjct: 175 KVSDFGLSRFLED---DTSDPTYTSALGGKIPIRWTAP 209
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 48/190 (25%), Positives = 98/190 (51%), Gaps = 22/190 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNL 764
++ + + +G G++G VY+G+ + VAVK + + + F+ E ++ I+H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 765 IKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVA 823
++++ +C+ F ++ E+M G+L D+L + N Q ++S + + +A ++
Sbjct: 70 VQLLGVCTREPPF------YIIIEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQIS 119
Query: 824 SAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIG 883
SA+EYL + +H DL N L+ + + V DFGL++ ++ T ++ G
Sbjct: 120 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTXTAHAG 169
Query: 884 IKGTVGYVAP 893
K + + AP
Sbjct: 170 AKFPIKWTAP 179
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 59/168 (35%), Positives = 92/168 (54%), Gaps = 31/168 (18%)
Query: 711 NMIGQGRFGTVYKGILGDDEMV---VAVKVINLKQKGASKSFVS----ECEALRNIRHRN 763
+ +G G FG V +G+ ++ VAVK++N +QK S V E + L+ RH +
Sbjct: 17 DTLGVGTFGKVK---IGEHQLTGHKVAVKILN-RQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 764 LIKIITICSS-TDFEGVDFKALVFEYMENGSLEDWL--HQSNDQVEVRKLSLIQRMNIAI 820
+IK+ + S+ TDF +V EY+ G L D++ H +++E R+L Q+
Sbjct: 73 IIKLYQVISTPTDF------FMVMEYVSGGELFDYICKHGRVEEMEARRL--FQQ----- 119
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
+ SA++Y H H +VH DLKP NVLLD M A + DFGL+ +S+
Sbjct: 120 -ILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 59/168 (35%), Positives = 92/168 (54%), Gaps = 31/168 (18%)
Query: 711 NMIGQGRFGTVYKGILGDDEMV---VAVKVINLKQKGASKSFVS----ECEALRNIRHRN 763
+ +G G FG V +G+ ++ VAVK++N +QK S V E + L+ RH +
Sbjct: 17 DTLGVGTFGKVK---IGEHQLTGHKVAVKILN-RQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 764 LIKIITICSS-TDFEGVDFKALVFEYMENGSLEDWL--HQSNDQVEVRKLSLIQRMNIAI 820
+IK+ + S+ TDF +V EY+ G L D++ H +++E R+L Q+
Sbjct: 73 IIKLYQVISTPTDF------FMVMEYVSGGELFDYICKHGRVEEMEARRL--FQQ----- 119
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
+ SA++Y H H +VH DLKP NVLLD M A + DFGL+ +S+
Sbjct: 120 -ILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 76.3 bits (186), Expect = 7e-14, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
+Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 756 LRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q ++S +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPF------YIIIEFMTYGNLLDYLRECNRQ----EVSAVV 112
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
+ +A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 113 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT------- 162
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 163 GDTYTAHAGAKFPIKWTAP 181
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 76.3 bits (186), Expect = 7e-14, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
+Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 756 LRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q ++S +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPF------YIIIEFMTYGNLLDYLRECNRQ----EVSAVV 112
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
+ +A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 113 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT------- 162
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 163 GDTYTAHAGAKFPIKWTAP 181
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 76.3 bits (186), Expect = 7e-14, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 102/202 (50%), Gaps = 22/202 (10%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSE 752
P +Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 5 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 63
Query: 753 CEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLS 811
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q EV +
Sbjct: 64 AAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQ-EVNAVV 116
Query: 812 LIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHL 871
L+ +A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 117 LLY---MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT---- 166
Query: 872 DIASKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 167 ---GDTYTAHAGAKFPIKWTAP 185
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 23/197 (11%)
Query: 697 YAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEAL 756
Y E+ SE S IG G FGTVYKG D V +KV++ + ++F +E L
Sbjct: 30 YWEIE--ASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPE-QFQAFRNEVAVL 86
Query: 757 RNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRM 816
R RH N++ + + + A+V ++ E SL LH V+ K + Q +
Sbjct: 87 RKTRHVNILLFMGYMTKDNL------AIVTQWCEGSSLYKHLH-----VQETKFQMFQLI 135
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASK 876
+IA A ++YLH ++H D+K +N+ L + +GDFGLA S +
Sbjct: 136 DIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192
Query: 877 TPSSSIGIKGTVGYVAP 893
P+ G+V ++AP
Sbjct: 193 QPT------GSVLWMAP 203
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 36/194 (18%)
Query: 712 MIGQGRFGTVYKGIL---GDDEMVVAVKVINLKQKGA-----SKSFVSECEALRNIRHRN 763
+IG G FG V +G L G E VA+K + KG + F+SE + H N
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTL----KGGYTERQRREFLSEASIMGQFEHPN 76
Query: 764 LIKIITICSSTDFEGVDFKAL----VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+I++ EGV ++ + E+MENG+L+ +L ++ Q ++IQ + +
Sbjct: 77 IIRL---------EGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-----FTVIQLVGML 122
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
+AS + YL + VH DL N+L++ ++V V DFGL++FL + D T +
Sbjct: 123 RGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD---PTYT 176
Query: 880 SSIGIKGTVGYVAP 893
SS+G K + + AP
Sbjct: 177 SSLGGKIPIRWTAP 190
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
+Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 67
Query: 756 LRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q EV + L+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPF------YIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLY 120
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
+A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 121 ---MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT------- 167
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 168 GDTYTAHAGAKFPIKWTAP 186
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
+Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 756 LRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q ++S +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQ----EVSAVV 112
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
+ +A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 113 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT------- 162
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 163 GDTYTAHAGAKFPIKWTAP 181
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
+Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 756 LRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q ++S +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQ----EVSAVV 112
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
+ +A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 113 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT------- 162
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 163 GDTYTAHAGAKFPIKWTAP 181
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
+Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 67
Query: 756 LRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q ++S +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQ----EVSAVV 117
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
+ +A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 118 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT------- 167
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 168 GDTYTAHAGAKFPIKWTAP 186
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
+Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 67
Query: 756 LRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q EV + L+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY 120
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
+A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 121 ---MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT------- 167
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 168 GDTXTAHAGAKFPIKWTAP 186
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
+Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 63
Query: 756 LRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q EV + L+
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY 116
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
+A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 117 ---MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT------- 163
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 164 GDTYTAPAGAKFPIKWTAP 182
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
+Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 64
Query: 756 LRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q EV + L+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY 117
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
+A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 118 ---MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT------- 164
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 165 GDTYTAPAGAKFPIKWTAP 183
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
+Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 67
Query: 756 LRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q EV + L+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY 120
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
+A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 121 ---MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT------- 167
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 168 GDTYTAHAGAKFPIKWTAP 186
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
+Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 75
Query: 756 LRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q EV + L+
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY 128
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
+A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 129 ---MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT------- 175
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 176 GDTYTAHAGAKFPIKWTAP 194
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
+Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 67
Query: 756 LRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q EV + L+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY 120
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
+A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 121 ---MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT------- 167
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 168 GDTYTAHAGAKFPIKWTAP 186
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
+Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 756 LRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q EV + L+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY 115
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
+A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 116 ---MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT------- 162
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 163 GDTYTAHAGAKFPIKWTAP 181
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
+Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 756 LRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q EV + L+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY 115
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
+A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 116 ---MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT------- 162
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 163 GDTYTAHAGAKFPIKWTAP 181
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
+Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 64
Query: 756 LRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q EV + L+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY 117
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
+A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 118 ---MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT------- 164
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 165 GDTYTAHAGAKFPIKWTAP 183
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA 755
+Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 64
Query: 756 LRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
++ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q EV + L+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY 117
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
+A ++SA+EYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 118 ---MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT------- 164
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 165 GDTYTAHAGAKFPIKWTAP 183
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 98/189 (51%), Gaps = 20/189 (10%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNL 764
++ + + +G G++G VY G+ + VAVK + + + F+ E ++ I+H NL
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNL 90
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
++++ +C+ E + +V EYM G+L D+L + N + EV + L+ +A ++S
Sbjct: 91 VQLLGVCT---LEPPFY--IVTEYMPYGNLLDYLRECNRE-EVTAVVLLY---MATQISS 141
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGI 884
A+EYL + +H DL N L+ + V V DFGL++ ++ T ++ G
Sbjct: 142 AMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMT-------GDTYTAHAGA 191
Query: 885 KGTVGYVAP 893
K + + AP
Sbjct: 192 KFPIKWTAP 200
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/190 (25%), Positives = 98/190 (51%), Gaps = 22/190 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNL 764
++ + + +G G++G VY+G+ + VAVK + + + F+ E ++ I+H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 765 IKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVA 823
++++ +C+ F ++ E+M G+L D+L + N Q ++S + + +A ++
Sbjct: 70 VQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQIS 119
Query: 824 SAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIG 883
SA+EYL + +H DL N L+ + + V DFGL++ ++ T ++ G
Sbjct: 120 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-------GDTFTAHAG 169
Query: 884 IKGTVGYVAP 893
K + + AP
Sbjct: 170 AKFPIKWTAP 179
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 100/197 (50%), Gaps = 20/197 (10%)
Query: 697 YAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEAL 756
Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E +
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 270
Query: 757 RNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRM 816
+ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q ++S + +
Sbjct: 271 KEIKHPNLVQLLGVCTREP----PF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVLL 321
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASK 876
+A ++SA+EYL + +H +L N L+ + + V DFGL++ ++
Sbjct: 322 YMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-------D 371
Query: 877 TPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 372 TYTAHAGAKFPIKWTAP 388
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 19/184 (10%)
Query: 682 SVDTSPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK 741
S D + M+ L S + + + IG G FGTVYKG D VAVK++N+
Sbjct: 13 SEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVT 69
Query: 742 QKGASK--SFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLH 799
+ +F +E LR RH N++ + + A+V ++ E SL LH
Sbjct: 70 APTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL------AIVTQWCEGSSLYHHLH 123
Query: 800 QSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859
+ K +I+ ++IA A ++YLH ++H DLK +N+ L D+ +GD
Sbjct: 124 -----IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 175
Query: 860 FGLA 863
FGLA
Sbjct: 176 FGLA 179
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 19/184 (10%)
Query: 682 SVDTSPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK 741
S D + M+ L S + + + IG G FGTVYKG D VAVK++N+
Sbjct: 13 SEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVT 69
Query: 742 QKGASK--SFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLH 799
+ +F +E LR RH N++ + + A+V ++ E SL LH
Sbjct: 70 APTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL------AIVTQWCEGSSLYHHLH 123
Query: 800 QSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859
+ K +I+ ++IA A ++YLH ++H DLK +N+ L D+ +GD
Sbjct: 124 -----IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 175
Query: 860 FGLA 863
FGLA
Sbjct: 176 FGLA 179
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK--SFVSECEALRNIRHRN 763
+ + IG G FGTVYKG D VAVK++N+ + +F +E LR RH N
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVA 823
++ + ++ A+V ++ E SL LH + K +I+ ++IA A
Sbjct: 66 ILLFMGYSTAPQL------AIVTQWCEGSSLYHHLH-----IIETKFEMIKLIDIARQTA 114
Query: 824 SAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
++YLH ++H DLK +N+ L D+ +GDFGLA
Sbjct: 115 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 19/184 (10%)
Query: 682 SVDTSPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK 741
S D + M+ L S + + + IG G FGTVYKG D VAVK++N+
Sbjct: 12 SEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVT 68
Query: 742 QKGASK--SFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLH 799
+ +F +E LR RH N++ + + A+V ++ E SL LH
Sbjct: 69 APTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL------AIVTQWCEGSSLYHHLH 122
Query: 800 QSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859
+ K +I+ ++IA A ++YLH ++H DLK +N+ L D+ +GD
Sbjct: 123 -----IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 174
Query: 860 FGLA 863
FGLA
Sbjct: 175 FGLA 178
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 20/197 (10%)
Query: 697 YAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEAL 756
Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E +
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 267
Query: 757 RNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRM 816
+ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q EV + L+
Sbjct: 268 KEIKHPNLVQLLGVCTREP----PF-YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY-- 319
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASK 876
+A ++SA+EYL + +H +L N L+ + + V DFGL++ ++
Sbjct: 320 -MATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-------GD 368
Query: 877 TPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 369 TYTAHAGAKFPIKWTAP 385
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 20/197 (10%)
Query: 697 YAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEAL 756
Y + ++ + + +G G++G VY+G+ + VAVK + + + F+ E +
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 309
Query: 757 RNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRM 816
+ I+H NL++++ +C+ F ++ E+M G+L D+L + N Q EV + L+
Sbjct: 310 KEIKHPNLVQLLGVCTREP----PF-YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY-- 361
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASK 876
+A ++SA+EYL + +H +L N L+ + + V DFGL++ ++
Sbjct: 362 -MATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-------GD 410
Query: 877 TPSSSIGIKGTVGYVAP 893
T ++ G K + + AP
Sbjct: 411 TYTAHAGAKFPIKWTAP 427
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK--SFVSECEALRNIRHRN 763
+ + IG G FGTVYKG D VAVK++N+ + +F +E LR RH N
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 70
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVA 823
++ + + A+V ++ E SL LH + K +I+ ++IA A
Sbjct: 71 ILLFMGYSTKPQL------AIVTQWCEGSSLYHHLH-----IIETKFEMIKLIDIARQTA 119
Query: 824 SAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
++YLH ++H DLK +N+ L D+ +GDFGLA
Sbjct: 120 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 28/195 (14%)
Query: 705 SEFSSSNMIGQGRFGTVYKGI-LGDDEMVVAVKVINLKQKGA--SKSFVSECEALRNIRH 761
SE + IG G+FG V+ G L D+ VA+K I ++GA + F+ E E + + H
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSH 59
Query: 762 RNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821
L+++ +C E LVFE+ME+G L D+L L + + +D
Sbjct: 60 PKLVQLYGVC----LEQAPI-CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLD 109
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
V + YL C ++H DL N L+ + V V DFG+ +F+ + +SS
Sbjct: 110 VCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSS 159
Query: 882 IGIKGTVGYVAPGKF 896
G K V + +P F
Sbjct: 160 TGTKFPVKWASPEVF 174
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 28/195 (14%)
Query: 705 SEFSSSNMIGQGRFGTVYKGI-LGDDEMVVAVKVINLKQKGA--SKSFVSECEALRNIRH 761
SE + IG G+FG V+ G L D+ VA+K I ++GA + F+ E E + + H
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSH 64
Query: 762 RNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821
L+++ +C E LVFE+ME+G L D+L L + + +D
Sbjct: 65 PKLVQLYGVC----LEQAPI-CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLD 114
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
V + YL C ++H DL N L+ + V V DFG+ +F+ + +SS
Sbjct: 115 VCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSS 164
Query: 882 IGIKGTVGYVAPGKF 896
G K V + +P F
Sbjct: 165 TGTKFPVKWASPEVF 179
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 28/195 (14%)
Query: 705 SEFSSSNMIGQGRFGTVYKGI-LGDDEMVVAVKVINLKQKGA--SKSFVSECEALRNIRH 761
SE + IG G+FG V+ G L D+ VA+K I ++GA + F+ E E + + H
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSH 61
Query: 762 RNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821
L+++ +C E LVFE+ME+G L D+L L + + +D
Sbjct: 62 PKLVQLYGVC----LEQAPI-CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLD 111
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
V + YL C ++H DL N L+ + V V DFG+ +F+ + +SS
Sbjct: 112 VCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSS 161
Query: 882 IGIKGTVGYVAPGKF 896
G K V + +P F
Sbjct: 162 TGTKFPVKWASPEVF 176
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK--SFVSECEALRNIRHRN 763
+ + IG G FGTVYKG D VAVK++N+ + +F +E LR RH N
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVA 823
++ + + A+V ++ E SL LH + K +I+ ++IA A
Sbjct: 66 ILLFMGYSTKPQL------AIVTQWCEGSSLYHHLH-----IIETKFEMIKLIDIARQTA 114
Query: 824 SAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
++YLH ++H DLK +N+ L D+ +GDFGLA
Sbjct: 115 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK--SFVSECEALRNIRHRN 763
+ + IG G FGTVYKG D VAVK++N+ + +F +E LR RH N
Sbjct: 11 QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 67
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVA 823
++ + + A+V ++ E SL LH + K +I+ ++IA A
Sbjct: 68 ILLFMGYSTKPQL------AIVTQWCEGSSLYHHLH-----IIETKFEMIKLIDIARQTA 116
Query: 824 SAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
++YLH ++H DLK +N+ L D+ +GDFGLA
Sbjct: 117 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 153
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK--SFVSECEALRNIRHRN 763
+ + IG G FGTVYKG D VAVK++N+ + +F +E LR RH N
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 70
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVA 823
++ + + A+V ++ E SL LH + K +I+ ++IA A
Sbjct: 71 ILLFMGYSTKPQL------AIVTQWCEGSSLYHHLH-----IIETKFEMIKLIDIARQTA 119
Query: 824 SAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
++YLH ++H DLK +N+ L D+ +GDFGLA
Sbjct: 120 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 39/217 (17%)
Query: 692 FPMVSYAELSKATSEFSSS------NMIGQGRFGTVYKGILGDDEMVVAVK----VINLK 741
F S+ EL T+ F N G+G FG VYKG + + VAVK ++++
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN--TTVAVKKLAAMVDIT 60
Query: 742 QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQS 801
+ + F E + +H NL++++ S +G D LV+ Y NGSL D L
Sbjct: 61 TEELKQQFDQEIKVXAKCQHENLVELLGFSS----DGDDL-CLVYVYXPNGSLLDRLSCL 115
Query: 802 NDQVEVRKLSLIQRMNIAIDVASAIEYLH--HHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859
+ LS R IA A+ I +LH HH +H D+K +N+LLD A + D
Sbjct: 116 DG---TPPLSWHXRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISD 167
Query: 860 FGLAKFLSNHHLDIASKTPSSSIG---IKGTVGYVAP 893
FGLA+ AS+ + + I GT Y AP
Sbjct: 168 FGLAR---------ASEKFAQXVXXSRIVGTTAYXAP 195
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK--SFVSECEALRNIRHRN 763
+ + IG G FGTVYKG D VAVK++N+ + +F +E LR RH N
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVA 823
++ + + A+V ++ E SL LH + K +I+ ++IA A
Sbjct: 66 ILLFMGYSTKPQL------AIVTQWCEGSSLYHHLH-----IIETKFEMIKLIDIARQTA 114
Query: 824 SAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
++YLH ++H DLK +N+ L D+ +GDFGLA
Sbjct: 115 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 19/182 (10%)
Query: 684 DTSPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
D + M+ L S + + + IG G FGTVYKG D VAVK++N+
Sbjct: 7 DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAP 63
Query: 744 GASK--SFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQS 801
+ +F +E LR RH N++ + + A+V ++ E SL LH
Sbjct: 64 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL------AIVTQWCEGSSLYHHLH-- 115
Query: 802 NDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861
+ K +I+ ++IA A ++YLH ++H DLK +N+ L D+ +GDFG
Sbjct: 116 ---IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFG 169
Query: 862 LA 863
LA
Sbjct: 170 LA 171
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 34/195 (17%)
Query: 710 SNMIGQGRFGTVYKGIL---GDDEMVVAVKVIN----LKQKGASKSFVSECEALRNIRHR 762
+IG G FG V G L G E+ VA+K + KQ+ + F+SE + H
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR---RDFLSEASIMGQFDHP 68
Query: 763 NLIKIITICSSTDFEGVDFKA----LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
N+I + EGV K+ ++ E+MENGSL+ +L Q++ Q ++IQ + +
Sbjct: 69 NVIHL---------EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-----FTVIQLVGM 114
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
+A+ ++YL VH L N+L++ ++V V DFGL++FL + D + T
Sbjct: 115 LRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLED---DTSDPTY 168
Query: 879 SSSIGIKGTVGYVAP 893
+S++G K + + AP
Sbjct: 169 TSALGGKIPIRWTAP 183
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 275 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 333 EEPI------YIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM 382
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
VH DL+ +N+L+ ++V V DFGLA+ + ++ ++ G K + + A
Sbjct: 383 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 432
Query: 893 P 893
P
Sbjct: 433 P 433
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 73.2 bits (178), Expect = 7e-13, Method: Composition-based stats.
Identities = 58/194 (29%), Positives = 90/194 (46%), Gaps = 26/194 (13%)
Query: 705 SEFSSSNMIGQGRFGTVYKGI-LGDDEMVVAVKVINLKQKGASKS-FVSECEALRNIRHR 762
SE + IG G+FG V+ G L D+ VA+K I K+ S+ F+ E E + + H
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTI--KEGSMSEDDFIEEAEVMMKLSHP 82
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
L+++ +C E LVFE+ME+G L D+L L + + +DV
Sbjct: 83 KLVQLYGVC----LEQAPI-CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDV 132
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSI 882
+ YL C ++H DL N L+ + V V DFG+ +F+ + +SS
Sbjct: 133 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSST 182
Query: 883 GIKGTVGYVAPGKF 896
G K V + +P F
Sbjct: 183 GTKFPVKWASPEVF 196
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 11/193 (5%)
Query: 711 NMIGQGRFGTVYKGILGDDE---MVVAVKVINLKQKGASK--SFVSECEALRNIRHRNLI 765
++G+G FG+V +G L ++ + VAVK + L + F+SE +++ H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+++ +C +G+ ++ +M+ G L +L S + + + L + +D+A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN---HHLDIASKTPSSSI 882
+EYL + +H DL N +L DM V DFGL+K + + + +K P I
Sbjct: 160 MEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 883 GIKGTVGYVAPGK 895
I+ V K
Sbjct: 217 AIESLADRVYTSK 229
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 72.8 bits (177), Expect = 8e-13, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 23/167 (13%)
Query: 713 IGQGRFGTV-----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKI 767
+G+G FG V Y D+M+VAVK + A K F E E L N++H +++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWL--HQSNDQVEVR--------KLSLIQRMN 817
+C D +VFEYM++G L +L H + + V +L L Q ++
Sbjct: 83 YGVCGDG-----DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
IA +AS + YL VH DL N L+ +++ +GDFG+++
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 250 EEPI------YIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM 299
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
VH DL+ +N+L+ ++V V DFGLA+ + ++ ++ G K + + A
Sbjct: 300 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 349
Query: 893 P 893
P
Sbjct: 350 P 350
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 250 EEPI------YIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM 299
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
VH DL+ +N+L+ ++V V DFGLA+ + ++ ++ G K + + A
Sbjct: 300 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 349
Query: 893 P 893
P
Sbjct: 350 P 350
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 250 EEPI------YIVGEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM 299
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
VH DL+ +N+L+ ++V V DFGLA+ + ++ ++ G K + + A
Sbjct: 300 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 349
Query: 893 P 893
P
Sbjct: 350 P 350
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 87/168 (51%), Gaps = 22/168 (13%)
Query: 708 SSSNMIGQGRFGTVYKGIL----GDDEMVVAVKVINLKQKGASK-SFVSECEALRNIRHR 762
+ +IG G FG VYKG+L G E+ VA+K + + F+ E + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 763 NLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
N+I++ + S +K ++ EYMENG+L+ +L + + + S++Q + +
Sbjct: 107 NIIRLEGVISK-------YKPMMIITEYMENGALDKFLREKDGE-----FSVLQLVGMLR 154
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
+A+ ++YL + VH DL N+L++ ++V V DFGL++ L +
Sbjct: 155 GIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 28/195 (14%)
Query: 705 SEFSSSNMIGQGRFGTVYKGI-LGDDEMVVAVKVINLKQKGA--SKSFVSECEALRNIRH 761
SE + IG G+FG V+ G L D+ VA+K I ++GA + F+ E E + + H
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSH 61
Query: 762 RNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821
L+++ +C E LVFE+ME+G L D+L L + + +D
Sbjct: 62 PKLVQLYGVC----LEQAPI-CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLD 111
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
V + YL + ++H DL N L+ + V V DFG+ +F+ + +SS
Sbjct: 112 VCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSS 161
Query: 882 IGIKGTVGYVAPGKF 896
G K V + +P F
Sbjct: 162 TGTKFPVKWASPEVF 176
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 70.5 bits (171), Expect = 5e-12, Method: Composition-based stats.
Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 28/195 (14%)
Query: 705 SEFSSSNMIGQGRFGTVYKGI-LGDDEMVVAVKVINLKQKGA--SKSFVSECEALRNIRH 761
SE + IG G+FG V+ G L D+ VA+K I ++GA + F+ E E + + H
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSH 62
Query: 762 RNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821
L+++ +C E LV E+ME+G L D+L L + + +D
Sbjct: 63 PKLVQLYGVC----LEQAPI-CLVTEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLD 112
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
V + YL C ++H DL N L+ + V V DFG+ +F+ + +SS
Sbjct: 113 VCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSS 162
Query: 882 IGIKGTVGYVAPGKF 896
G K V + +P F
Sbjct: 163 TGTKFPVKWASPEVF 177
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 56/156 (35%), Positives = 79/156 (50%), Gaps = 23/156 (14%)
Query: 713 IGQGRFGTVYKGILGDDE-MVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
IG+G FG V +LGD VAVK I K +++F++E + +RH NL++++ +
Sbjct: 14 IGKGEFGDV---MLGDYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 772 SSTDFEGVDFKA---LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
V+ K +V EYM GSL D+L V L + ++DV A+EY
Sbjct: 69 -------VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEY 117
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
L + VH DL NVL+ D VA V DFGL K
Sbjct: 118 LEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 150
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 56/156 (35%), Positives = 79/156 (50%), Gaps = 23/156 (14%)
Query: 713 IGQGRFGTVYKGILGDDE-MVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
IG+G FG V +LGD VAVK I K +++F++E + +RH NL++++ +
Sbjct: 20 IGKGEFGDV---MLGDYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 772 SSTDFEGVDFKA---LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
V+ K +V EYM GSL D+L V L + ++DV A+EY
Sbjct: 75 -------VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEY 123
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
L + VH DL NVL+ D VA V DFGL K
Sbjct: 124 LEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 156
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 56/156 (35%), Positives = 79/156 (50%), Gaps = 23/156 (14%)
Query: 713 IGQGRFGTVYKGILGDDE-MVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
IG+G FG V +LGD VAVK I K +++F++E + +RH NL++++ +
Sbjct: 29 IGKGEFGDV---MLGDYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 772 SSTDFEGVDFKA---LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
V+ K +V EYM GSL D+L V L + ++DV A+EY
Sbjct: 84 -------VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEY 132
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
L + VH DL NVL+ D VA V DFGL K
Sbjct: 133 LEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 165
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G FG+V Y + + VVAVK + + + F E E L++++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+C S + L+ EY+ GSL D+L + ++++ KL + + +EY
Sbjct: 96 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 147
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
L +H DL N+L++ + +GDFGL K L K P S
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 711 NMIGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
+G+G FG+V Y + + VVAVK + + + F E E L++++H N++K
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+C S G L+ EY+ GSL D+L + ++++ KL + + +
Sbjct: 76 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGM 127
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
EYL +H DL N+L++ + +GDFGL K L K P S
Sbjct: 128 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 179
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 711 NMIGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
+G+G FG+V Y + + VVAVK + + + F E E L++++H N++K
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+C S G L+ EY+ GSL D+L + ++++ KL + + +
Sbjct: 83 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGM 134
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
EYL +H DL N+L++ + +GDFGL K L K P S
Sbjct: 135 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 186
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G FG+V Y + + VVAVK + + + F E E L++++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+C S + L+ EY+ GSL D+L + ++++ KL + + +EY
Sbjct: 96 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 147
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
L +H DL N+L++ + +GDFGL K L K P S
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 711 NMIGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
+G+G FG+V Y + + VVAVK + + + F E E L++++H N++K
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+C S G L+ EY+ GSL D+L + ++++ KL + + +
Sbjct: 107 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGM 158
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
EYL +H DL N+L++ + +GDFGL K L K P S
Sbjct: 159 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 193 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGNM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 251 EEPI------YIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 300
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
VH DL+ +N+L+ ++V V DFGL + + ++ ++ G K + + A
Sbjct: 301 N---YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEY-------TARQGAKFPIKWTA 350
Query: 893 P 893
P
Sbjct: 351 P 351
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 69.7 bits (169), Expect = 8e-12, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 20/164 (12%)
Query: 713 IGQGRFGTV-----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKI 767
+G+G FG V Y D+++VAVK + A K F E E L N++H +++K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWLH-QSNDQVEV------RKLSLIQRMNIAI 820
+C EG D +VFEYM++G L +L D V + +L+ Q ++IA
Sbjct: 81 YGVC----VEG-DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+A+ + YL VH DL N L+ +++ +GDFG+++
Sbjct: 136 QIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 69.7 bits (169), Expect = 8e-12, Method: Composition-based stats.
Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 40/193 (20%)
Query: 696 SYAELSKATSEFSSS---------NMIGQGRFGTVYKGIL---GDDEMVVAVKVINL--- 740
+Y + ++A EF+ +IG G FG V G L G E+ VA+K + +
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 741 -KQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA----LVFEYMENGSLE 795
KQ+ + F+ E + H N+I + EGV K+ +V EYMENGSL+
Sbjct: 64 EKQR---RDFLGEASIMGQFDHPNIIHL---------EGVVTKSKPVMIVTEYMENGSLD 111
Query: 796 DWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVA 855
+L +++ Q ++IQ + + +++ ++YL VH DL N+L++ ++V
Sbjct: 112 TFLKKNDGQ-----FTVIQLVGMLRGISAGMKYLSDM---GYVHRDLAARNILINSNLVC 163
Query: 856 HVGDFGLAKFLSN 868
V DFGL++ L +
Sbjct: 164 KVSDFGLSRVLED 176
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 34/208 (16%)
Query: 693 PMVSYAELSKA--TSEFSSSNMIGQGRFGTVYKGIL---GDDEMVVAVKVINL----KQK 743
P + E +K + S ++G G FG V G L E+ VA+K + + KQ+
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 744 GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA----LVFEYMENGSLEDWLH 799
+ F+ E + H N+I++ EGV K+ +V EYMENGSL+ +L
Sbjct: 91 ---RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 800 QSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859
+ + Q ++IQ + + +AS ++YL VH DL N+L++ ++V V D
Sbjct: 139 KHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSD 190
Query: 860 FGLAKFLSNHHLDIASKTPSSSIGIKGT 887
FGLA+ L + + A T I I+ T
Sbjct: 191 FGLARVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G FG+V Y + + VVAVK + + + F E E L++++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+C S G L+ EY+ GSL D+L + ++++ KL + + +EY
Sbjct: 78 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 129
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
L +H DL N+L++ + +GDFGL K L K P S
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGES 179
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 16 LGQGCFGEVWMGTW-NGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 74 EEPI------XIVTEYMSKGSLLDFLKGETG----KYLRLPQLVDMAAQIASGMAYVE-- 121
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
+ VH DL+ +N+L+ ++V V DFGLA+ + ++ ++ G K + + A
Sbjct: 122 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-------TARQGAKFPIKWTA 173
Query: 893 P 893
P
Sbjct: 174 P 174
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G FG+V Y + + VVAVK + + + F E E L++++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+C S + L+ EY+ GSL D+L + ++++ KL + + +EY
Sbjct: 81 GVCYSAGRRNLK---LIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 132
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
L +H DL N+L++ + +GDFGL K L K P S
Sbjct: 133 LG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G FG+V Y + + VVAVK + + + F E E L++++H N++K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+C S + L+ EY+ GSL D+L + ++++ KL + + +EY
Sbjct: 76 GVCYSAGRRNLK---LIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 127
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
L +H DL N+L++ + +GDFGL K L K P S
Sbjct: 128 LG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 177
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G FG+V Y + + VVAVK + + + F E E L++++H N++K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+C S + L+ EY+ GSL D+L + ++++ KL + + +EY
Sbjct: 83 GVCYSAGRRNLK---LIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 134
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
L +H DL N+L++ + +GDFGL K L K P S
Sbjct: 135 LG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 184
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G FG+V Y + + VVAVK + + + F E E L++++H N++K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+C S + L+ EY+ GSL D+L + ++++ KL + + +EY
Sbjct: 84 GVCYSAGRRNLK---LIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 135
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
L +H DL N+L++ + +GDFGL K L K P S
Sbjct: 136 LG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 185
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G FG+V Y + + VVAVK + + + F E E L++++H N++K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+C S + L+ EY+ GSL D+L + ++++ KL + + +EY
Sbjct: 82 GVCYSAGRRNLK---LIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 133
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
L +H DL N+L++ + +GDFGL K L K P S
Sbjct: 134 LG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 183
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G FG+V Y + + VVAVK + + + F E E L++++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+C S + L+ EY+ GSL D+L + ++++ KL + + +EY
Sbjct: 78 GVCYSAGRRNLK---LIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 129
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
L +H DL N+L++ + +GDFGL K L K P S
Sbjct: 130 LG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 179
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G FG+V Y + + VVAVK + + + F E E L++++H N++K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+C S + L+ EY+ GSL D+L + ++++ KL + + +EY
Sbjct: 77 GVCYSAGRRNLK---LIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 128
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
L +H DL N+L++ + +GDFGL K L K P S
Sbjct: 129 LG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 178
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 37/213 (17%)
Query: 691 LFPMVSYAELSKATSEFSSSNM-----IGQGRFGTVYKGIL---GDDEMVVAVKVINL-- 740
L P S + + E ++N+ +G G FG V G L E+ VA+K + +
Sbjct: 14 LVPRGSTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY 73
Query: 741 --KQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA----LVFEYMENGSL 794
KQ+ + F+ E + H N+I++ EGV K+ +V EYMENGSL
Sbjct: 74 TEKQR---RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSL 121
Query: 795 EDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV 854
+ +L + + Q ++IQ + + +AS ++YL VH DL N+L++ ++V
Sbjct: 122 DSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLV 173
Query: 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGT 887
V DFGL++ L + + A T I I+ T
Sbjct: 174 CKVSDFGLSRVLEDDP-EAAYTTRGGKIPIRWT 205
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ IRH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 84 EEPI------YIVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
+ VH DL+ +N+L+ ++V V DFGLA+ + ++ ++ G K + + A
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 893 P 893
P
Sbjct: 184 P 184
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 15/173 (8%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G FG+V Y + + VVAVK + + + F E E L++++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+C S + L+ EY+ GSL D+L Q ++ I+ + + +EY
Sbjct: 81 GVCYSAGRRNLK---LIMEYLPYGSLRDYL-----QAHAERIDHIKLLQYTSQICKGMEY 132
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
L +H DL N+L++ + +GDFGL K L K P S
Sbjct: 133 LG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 19 LGQGCFGEVWMGTW-NGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 77 EEPI------YIVTEYMSKGSLLDFLKGETG----KYLRLPQLVDMAAQIASGMAYVE-- 124
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
+ VH DL+ +N+L+ ++V V DFGLA+ + ++ ++ G K + + A
Sbjct: 125 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 176
Query: 893 P 893
P
Sbjct: 177 P 177
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 84 EEPI------YIVIEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
+ VH DL+ +N+L+ ++V V DFGLA+ + ++ ++ G K + + A
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 893 P 893
P
Sbjct: 184 P 184
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 84 EEPI------YIVIEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
+ VH DL+ +N+L+ ++V V DFGLA+ + ++ ++ G K + + A
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-------TARQGAKFPIKWTA 183
Query: 893 P 893
P
Sbjct: 184 P 184
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 34/208 (16%)
Query: 693 PMVSYAELSKA--TSEFSSSNMIGQGRFGTVYKGIL---GDDEMVVAVKVINL----KQK 743
P + E +K + S ++G G FG V G L E+ VA+K + + KQ+
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 744 GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA----LVFEYMENGSLEDWLH 799
+ F+ E + H N+I++ EGV K+ +V EYMENGSL+ +L
Sbjct: 91 ---RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 800 QSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859
+ + Q ++IQ + + +AS ++YL VH DL N+L++ ++V V D
Sbjct: 139 KHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSD 190
Query: 860 FGLAKFLSNHHLDIASKTPSSSIGIKGT 887
FGL++ L + + A T I I+ T
Sbjct: 191 FGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 30/198 (15%)
Query: 713 IGQGRFGTVYKGILGDDEM-VVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
IG+G FG V +LGD VAVK I K +++F++E + +RH NL++++ +
Sbjct: 201 IGKGEFGDV---MLGDYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 772 SSTDFEGVDFKA---LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
V+ K +V EYM GSL D+L V L + ++DV A+EY
Sbjct: 256 -------VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEY 304
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTV 888
L + VH DL NVL+ D VA V DFGL K + +S + + +K T
Sbjct: 305 LEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTA 354
Query: 889 GYVAPGKFFMLYTHIPSF 906
K F + + SF
Sbjct: 355 PEALREKKFSTKSDVWSF 372
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 34/208 (16%)
Query: 693 PMVSYAELSKA--TSEFSSSNMIGQGRFGTVYKGIL---GDDEMVVAVKVINL----KQK 743
P + E +K + S ++G G FG V G L E+ VA+K + + KQ+
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 744 GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA----LVFEYMENGSLEDWLH 799
+ F+ E + H N+I++ EGV K+ +V EYMENGSL+ +L
Sbjct: 91 ---RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 800 QSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859
+ + Q ++IQ + + +AS ++YL VH DL N+L++ ++V V D
Sbjct: 139 KHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSD 190
Query: 860 FGLAKFLSNHHLDIASKTPSSSIGIKGT 887
FGL++ L + + A T I I+ T
Sbjct: 191 FGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 32/195 (16%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGIL---GDDEMVVAVKVINL----KQKGASKSFVSECEAL 756
+ S ++G G FG V G L E+ VA+K + + KQ+ + F+ E +
Sbjct: 15 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIM 71
Query: 757 RNIRHRNLIKIITICSSTDFEGVDFKA----LVFEYMENGSLEDWLHQSNDQVEVRKLSL 812
H N+I++ EGV K+ +V EYMENGSL+ +L + + Q ++
Sbjct: 72 GQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-----FTV 117
Query: 813 IQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
IQ + + +AS ++YL VH DL N+L++ ++V V DFGL++ L + +
Sbjct: 118 IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-E 173
Query: 873 IASKTPSSSIGIKGT 887
A T I I+ T
Sbjct: 174 AAYTTRGGKIPIRWT 188
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 34/208 (16%)
Query: 693 PMVSYAELSKA--TSEFSSSNMIGQGRFGTVYKGIL---GDDEMVVAVKVINL----KQK 743
P + E +K + S ++G G FG V G L E+ VA+K + + KQ+
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 744 GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA----LVFEYMENGSLEDWLH 799
+ F+ E + H N+I++ EGV K+ +V EYMENGSL+ +L
Sbjct: 91 ---RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 800 QSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859
+ + Q ++IQ + + +AS ++YL VH DL N+L++ ++V V D
Sbjct: 139 KHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSD 190
Query: 860 FGLAKFLSNHHLDIASKTPSSSIGIKGT 887
FGL++ L + + A T I I+ T
Sbjct: 191 FGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 34/208 (16%)
Query: 693 PMVSYAELSKA--TSEFSSSNMIGQGRFGTVYKGIL---GDDEMVVAVKVINL----KQK 743
P + E +K + S ++G G FG V G L E+ VA+K + + KQ+
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 744 GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA----LVFEYMENGSLEDWLH 799
+ F+ E + H N+I++ EGV K+ +V EYMENGSL+ +L
Sbjct: 91 ---RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 800 QSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859
+ + Q ++IQ + + +AS ++YL VH DL N+L++ ++V V D
Sbjct: 139 KHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSD 190
Query: 860 FGLAKFLSNHHLDIASKTPSSSIGIKGT 887
FGL++ L + + A T I I+ T
Sbjct: 191 FGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 34/208 (16%)
Query: 693 PMVSYAELSKA--TSEFSSSNMIGQGRFGTVYKGIL---GDDEMVVAVKVINL----KQK 743
P + E +K + S ++G G FG V G L E+ VA+K + + KQ+
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 744 GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA----LVFEYMENGSLEDWLH 799
+ F+ E + H N+I++ EGV K+ +V EYMENGSL+ +L
Sbjct: 91 ---RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 800 QSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859
+ + Q ++IQ + + +AS ++YL VH DL N+L++ ++V V D
Sbjct: 139 KHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSD 190
Query: 860 FGLAKFLSNHHLDIASKTPSSSIGIKGT 887
FGL++ L + + A T I I+ T
Sbjct: 191 FGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 85/168 (50%), Gaps = 19/168 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGI-LGDDEMV---VAVKVINLKQ-KGASKSFVSECEALRNI 759
+E ++G G FGTVYKGI + + E V VA+K++N A+ F+ E + ++
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
H +L++++ +C S + LV + M +G L +++H+ D + + L +N
Sbjct: 98 DHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVHEHKDNIGSQLL-----LNWC 146
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
+ +A + YL +VH DL NVL+ + DFGLA+ L
Sbjct: 147 VQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLE 191
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 34/208 (16%)
Query: 693 PMVSYAELSKA--TSEFSSSNMIGQGRFGTVYKGIL---GDDEMVVAVKVINL----KQK 743
P + E +K + S ++G G FG V G L E+ VA+K + + KQ+
Sbjct: 29 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 88
Query: 744 GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA----LVFEYMENGSLEDWLH 799
+ F+ E + H N+I++ EGV K+ +V EYMENGSL+ +L
Sbjct: 89 ---RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLR 136
Query: 800 QSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859
+ + Q ++IQ + + +AS ++YL VH DL N+L++ ++V V D
Sbjct: 137 KHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSD 188
Query: 860 FGLAKFLSNHHLDIASKTPSSSIGIKGT 887
FGL++ L + + A T I I+ T
Sbjct: 189 FGLSRVLEDDP-EAAYTTRGGKIPIRWT 215
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 34/208 (16%)
Query: 693 PMVSYAELSKA--TSEFSSSNMIGQGRFGTVYKGIL---GDDEMVVAVKVINL----KQK 743
P + E +K + S ++G G FG V G L E+ VA+K + + KQ+
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 744 GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA----LVFEYMENGSLEDWLH 799
+ F+ E + H N+I++ EGV K+ +V EYMENGSL+ +L
Sbjct: 91 ---RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 800 QSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859
+ + Q ++IQ + + +AS ++YL VH DL N+L++ ++V V D
Sbjct: 139 KHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSD 190
Query: 860 FGLAKFLSNHHLDIASKTPSSSIGIKGT 887
FGL + L + + A T I I+ T
Sbjct: 191 FGLGRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 15 LGQGCFGEVWMGTW-NGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 73 EEPI------YIVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVE-- 120
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
+ VH DL+ +N+L+ ++V V DFGLA+ + ++ ++ G K + + A
Sbjct: 121 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 172
Query: 893 P 893
P
Sbjct: 173 P 173
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 17 LGQGCFGEVWMGTW-NGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 75 EEPI------YIVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVE-- 122
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
+ VH DL+ +N+L+ ++V V DFGLA+ + ++ ++ G K + + A
Sbjct: 123 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 174
Query: 893 P 893
P
Sbjct: 175 P 175
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 84 EEPI------YIVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
+ VH DL+ +N+L+ ++V V DFGLA+ + ++ ++ G K + + A
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 893 P 893
P
Sbjct: 184 P 184
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 84 EEPI------YIVCEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
+ VH DL+ +N+L+ ++V V DFGLA+ + ++ ++ G K + + A
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 893 P 893
P
Sbjct: 184 P 184
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTW-NGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L + L L Q ++++ +AS + Y+
Sbjct: 81 EEPI------YIVTEYMNKGSLLDFLKGETG----KYLRLPQLVDMSAQIASGMAYVE-- 128
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
+ VH DL+ +N+L+ ++V V DFGLA+ + ++ ++ G K + + A
Sbjct: 129 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 180
Query: 893 P 893
P
Sbjct: 181 P 181
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTW-NGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L + L L Q ++++ +AS + Y+
Sbjct: 81 EEPI------YIVTEYMNKGSLLDFLKGETG----KYLRLPQLVDMSAQIASGMAYVE-- 128
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ VH DL+ +N+L+ ++V V DFGLA+ + ++
Sbjct: 129 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 164
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 19/168 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDD----EMVVAVKVINLKQ-KGASKSFVSECEALRNI 759
+E ++G G FGTVYKGI + ++ VA+K++N A+ F+ E + ++
Sbjct: 15 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 74
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
H +L++++ +C S + LV + M +G L +++H+ D + + L +N
Sbjct: 75 DHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVHEHKDNIGSQLL-----LNWC 123
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
+ +A + YL +VH DL NVL+ + DFGLA+ L
Sbjct: 124 VQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLE 168
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 66.6 bits (161), Expect = 5e-11, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 22/166 (13%)
Query: 713 IGQGRFGTVYKG-----ILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKI 767
+G+G FG V+ + D+M+VAVK + + A + F E E L ++H+++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQ---------SNDQVEVRKLSLIQRMNI 818
+C+ EG +VFEYM +G L +L + V L L Q + +
Sbjct: 80 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
A VA+ + YL VH DL N L+ +V +GDFG+++
Sbjct: 135 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 177
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 699 ELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-----GASKSFVSEC 753
++ + + +G+G+F TVYK + +VA+K I L + G +++ + E
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 754 EALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLI 813
+ L+ + H N+I ++ F +LVF++ME LE + ++ + +
Sbjct: 64 KLLQELSHPNIIGLLDA-----FGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAY 117
Query: 814 QRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
M + +EYLH H ++H DLKP+N+LLD + V + DFGLAK
Sbjct: 118 MLMTL-----QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 29/167 (17%)
Query: 712 MIGQGRFGTVYKGIL---GDDEMVVAVKVINL----KQKGASKSFVSECEALRNIRHRNL 764
+IG G FG V G L G E+ VA+K + KQ+ + F+SE + H N+
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR---RDFLSEASIMGQFDHPNI 71
Query: 765 IK---IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821
I ++T C ++ EYMENGSL+ +L +++ + ++IQ + +
Sbjct: 72 IHLEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDG-----RFTVIQLVGMLRG 118
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
+ S ++YL VH DL N+L++ ++V V DFG+++ L +
Sbjct: 119 IGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLED 162
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 29/167 (17%)
Query: 712 MIGQGRFGTVYKGIL---GDDEMVVAVKVINL----KQKGASKSFVSECEALRNIRHRNL 764
+IG G FG V G L G E+ VA+K + KQ+ + F+SE + H N+
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR---RDFLSEASIMGQFDHPNI 77
Query: 765 IK---IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821
I ++T C ++ EYMENGSL+ +L +++ + ++IQ + +
Sbjct: 78 IHLEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDG-----RFTVIQLVGMLRG 124
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
+ S ++YL VH DL N+L++ ++V V DFG+++ L +
Sbjct: 125 IGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLED 168
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 39/230 (16%)
Query: 696 SYAELSKATSEFSSS---------NMIGQGRFGTVYKGIL---GDDEMVVAVKVINL--- 740
++ + ++A EF+ +IG G FG V G L G E+ VA+K +
Sbjct: 11 TFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYT 70
Query: 741 -KQKGASKSFVSECEALRNIRHRNLIK---IITICSSTDFEGVDFKALVFEYMENGSLED 796
KQ+ + F+SE + H N+I ++T C ++ EYMENGSL+
Sbjct: 71 DKQR---RDFLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDA 119
Query: 797 WLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAH 856
+L +++ + ++IQ + + + S ++YL VH DL N+L++ ++V
Sbjct: 120 FLRKNDG-----RFTVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCK 171
Query: 857 VGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFMLYTHIPSF 906
V DFG+++ L + + A T I I+ T + F + + S+
Sbjct: 172 VSDFGMSRVLEDDP-EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSY 220
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 66.2 bits (160), Expect = 7e-11, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM G L D+L + L L Q +++A +AS + Y+
Sbjct: 84 EEPI------YIVMEYMSKGCLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
+ VH DL+ +N+L+ ++V V DFGLA+ + ++ ++ G K + + A
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 893 P 893
P
Sbjct: 184 P 184
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 23/180 (12%)
Query: 713 IGQGRFGTVYKG-----ILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKI 767
+G+G FG V+ + D+M+VAVK + + A + F E E L ++H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWLH---------QSNDQVEVRKLSLIQRMNI 818
+C+ EG +VFEYM +G L +L + V L L Q + +
Sbjct: 109 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKT 877
A VA+ + YL VH DL N L+ +V +GDFG+++ S + + +T
Sbjct: 164 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 66.2 bits (160), Expect = 7e-11, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 84 EEPI------YIVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
+ VH DL +N+L+ ++V V DFGLA+ + ++ ++ G K + + A
Sbjct: 132 -RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 893 P 893
P
Sbjct: 184 P 184
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFV----SECEALRNIRHRNLIK 766
+ +G G FG V G VAVK++N +QK S V E + L+ RH ++IK
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILN-RQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 767 IITICSS-TDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ + S+ +D +V EY+ G L D++ ++ E L Q+ + S
Sbjct: 81 LYQVISTPSDI------FMVMEYVSGGELFDYICKNGRLDEKESRRLFQQ------ILSG 128
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
++Y H H +VH DLKP NVLLD M A + DFGL+ +S+
Sbjct: 129 VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 66.2 bits (160), Expect = 8e-11, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G FG+V Y + + VVAVK + + + F E E L++++H N++K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+C S + L+ EY+ GSL D+L + ++++ KL + + +EY
Sbjct: 79 GVCYSAGRRNLK---LIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 130
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
L +H +L N+L++ + +GDFGL K L K P S
Sbjct: 131 LG---TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGES 180
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKI 767
+G+G FG V Y + VAVK + + G E E LRN+ H N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIE 827
IC+ G+ L+ E++ +GSL+++L ++ + K++L Q++ A+ + ++
Sbjct: 89 KGICTEDGGNGI---KLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMD 140
Query: 828 YLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
YL VH DL NVL++ + +GDFGL K +
Sbjct: 141 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 89/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+G G+FG V+ G + V A+K + + +SF+ E + ++ ++H L+++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKV-AIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM GSL D+L E R L L +++A VA+ + Y+
Sbjct: 75 EEPI------YIVTEYMNKGSLLDFLKDG----EGRALKLPNLVDMAAQVAAGMAYIE-- 122
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
+ +H DL+ +N+L+ ++ + DFGLA+ + ++ ++ G K + + A
Sbjct: 123 -RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEX-------TARQGAKFPIKWTA 174
Query: 893 P 893
P
Sbjct: 175 P 175
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 711 NMIGQGRFGTVYKGILGDDE---MVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLIK 766
+IG+G FG VY G L D++ + AVK +N + G F++E +++ H N++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
++ IC + EG +V YM++G L +++ V+ L + + VA +
Sbjct: 155 LLGICLRS--EGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 205
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIK 885
++L VH DL N +LD V DFGLA+ + + D + + +K
Sbjct: 206 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKI 767
+G+G FG V Y + VAVK + + G E E LRN+ H N++K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIE 827
IC+ G+ L+ E++ +GSL+++L ++ + K++L Q++ A+ + ++
Sbjct: 77 KGICTEDGGNGI---KLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMD 128
Query: 828 YLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
YL VH DL NVL++ + +GDFGL K +
Sbjct: 129 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 165
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI--RHRNLIKIITI 770
IG+GRFG V++G +E VAVK+ + +++ +S+ E E + + RH N++ I
Sbjct: 37 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 91
Query: 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
+ + LV +Y E+GSL D+L++ VE + +A+ AS + +LH
Sbjct: 92 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVE-------GMIKLALSTASGLAHLH 143
Query: 831 HHC-----QPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIK 885
+P + H DLK N+L+ + + D GLA + D P+ +G K
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 202
Query: 886 GTVGYVAP 893
Y+AP
Sbjct: 203 ---RYMAP 207
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 710 SNMIGQGRFGTVYKGILGDDE---MVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLI 765
+ +IG+G FG VY G L D++ + AVK +N + G F++E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
++ IC + EG +V YM++G L +++ V+ L + + VA
Sbjct: 95 SLLGICLRS--EGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIK 885
+++L VH DL N +LD V DFGLA+ + + D + + +K
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI--RHRNLIKIITI 770
IG+GRFG V++G +E VAVK+ + +++ +S+ E E + + RH N++ I
Sbjct: 50 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 104
Query: 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
+ + LV +Y E+GSL D+L++ VE + +A+ AS + +LH
Sbjct: 105 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVE-------GMIKLALSTASGLAHLH 156
Query: 831 HHC-----QPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIK 885
+P + H DLK N+L+ + + D GLA + D P+ +G K
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 215
Query: 886 GTVGYVAP 893
Y+AP
Sbjct: 216 ---RYMAP 220
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G FG+V Y + + VVAVK + + + F E E L++++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+C S + L+ E++ GSL ++L + ++++ KL + + +EY
Sbjct: 81 GVCYSAGRRNLK---LIMEFLPYGSLREYLQKHKERIDHIKL-----LQYTSQICKGMEY 132
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
L +H DL N+L++ + +GDFGL K L K P S
Sbjct: 133 LG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 710 SNMIGQGRFGTVYKGILGDDE---MVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLI 765
+ +IG+G FG VY G L D++ + AVK +N + G F++E +++ H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
++ IC + EG +V YM++G L +++ V+ L + + VA
Sbjct: 100 SLLGICLRS--EGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 150
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIK 885
+++L VH DL N +LD V DFGLA+ + + D + + +K
Sbjct: 151 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 710 SNMIGQGRFGTVYKGILGDDE---MVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLI 765
+ +IG+G FG VY G L D++ + AVK +N + G F++E +++ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
++ IC + EG +V YM++G L +++ V+ L + + VA
Sbjct: 96 SLLGICLRS--EGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 146
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIK 885
+++L VH DL N +LD V DFGLA+ + + D + + +K
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 710 SNMIGQGRFGTVYKGILGDDE---MVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLI 765
+ +IG+G FG VY G L D++ + AVK +N + G F++E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
++ IC + EG +V YM++G L +++ V+ L + + VA
Sbjct: 95 SLLGICLRS--EGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIK 885
+++L VH DL N +LD V DFGLA+ + + D + + +K
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+GQG FG V+ G + VA+K + + ++F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+V EYM G L D+L + L L Q +++A +AS + Y+
Sbjct: 84 EEPI------YIVTEYMSKGCLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
+ VH DL+ +N+L+ ++V V DFGLA+ + ++ ++ G K + + A
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 893 P 893
P
Sbjct: 184 P 184
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 25/174 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-------KSFVSECEA 755
A +E IG+G FG V+KG L D+ VVA+K + L + F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 756 LRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQR 815
+ N+ H N++K+ + + +V E++ G D H+ D+ K S+ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCG---DLYHRLLDKAHPIKWSV--K 124
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL-----DYDMVAHVGDFGLAK 864
+ + +D+A IEY+ + PP+VH DL+ N+ L + + A V DFGL++
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIKIIT 769
+G+G FG V VA+K+IN K S E LR +RH ++IK+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 770 ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYL 829
+ S D E + +V EY N L D++ Q + E Q+ + SA+EY
Sbjct: 81 VIKSKD-EII----MVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQ------IISAVEYC 128
Query: 830 HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
H H +VH DLKP N+LLD + + DFGL+ +++
Sbjct: 129 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 86/158 (54%), Gaps = 17/158 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V+ G + VAVK +LKQ S +F++E ++ ++H+ L+++ +
Sbjct: 21 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 78 TQEPI------YIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIE- 126
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ +H DL+ +N+L+ + + DFGLA+ + ++
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 86/158 (54%), Gaps = 17/158 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V+ G + VAVK +LKQ S +F++E ++ ++H+ L+++ +
Sbjct: 21 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 78 TQEPI------YIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIE- 126
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ +H DL+ +N+L+ + + DFGLA+ + ++
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 86/158 (54%), Gaps = 17/158 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V+ G + VAVK +LKQ S +F++E ++ ++H+ L+++ +
Sbjct: 30 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 87 TQEPI------YIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIE- 135
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ +H DL+ +N+L+ + + DFGLA+ + ++
Sbjct: 136 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 171
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 86/158 (54%), Gaps = 17/158 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V+ G + VAVK +LKQ S +F++E ++ ++H+ L+++ +
Sbjct: 29 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 86 TQEPI------YIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIE- 134
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ +H DL+ +N+L+ + + DFGLA+ + ++
Sbjct: 135 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 170
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 86/158 (54%), Gaps = 17/158 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V+ G + VAVK +LKQ S +F++E ++ ++H+ L+++ +
Sbjct: 27 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 84 TQEPI------YIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIE- 132
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ +H DL+ +N+L+ + + DFGLA+ + ++
Sbjct: 133 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 168
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 86/158 (54%), Gaps = 17/158 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V+ G + VAVK +LKQ S +F++E ++ ++H+ L+++ +
Sbjct: 27 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 84 TQEPI------YIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIE- 132
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ +H DL+ +N+L+ + + DFGLA+ + ++
Sbjct: 133 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 168
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 86/158 (54%), Gaps = 17/158 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V+ G + VAVK +LKQ S +F++E ++ ++H+ L+++ +
Sbjct: 22 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 79 TQEPI------YIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIE- 127
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ +H DL+ +N+L+ + + DFGLA+ + ++
Sbjct: 128 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 163
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 86/158 (54%), Gaps = 17/158 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V+ G + VAVK +LKQ S +F++E ++ ++H+ L+++ +
Sbjct: 31 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 88 TQEPI------YIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIE- 136
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ +H DL+ +N+L+ + + DFGLA+ + ++
Sbjct: 137 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 172
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 86/158 (54%), Gaps = 17/158 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V+ G + VAVK +LKQ S +F++E ++ ++H+ L+++ +
Sbjct: 21 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 78 TQEPI------YIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIE- 126
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ +H DL+ +N+L+ + + DFGLA+ + ++
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 86/158 (54%), Gaps = 17/158 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V+ G + VAVK +LKQ S +F++E ++ ++H+ L+++ +
Sbjct: 16 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 73 TQEPI------YIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIE- 121
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ +H DL+ +N+L+ + + DFGLA+ + ++
Sbjct: 122 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 157
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 86/158 (54%), Gaps = 17/158 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V+ G + VAVK +LKQ S +F++E ++ ++H+ L+++ +
Sbjct: 23 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 80 TQEPI------YIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIE- 128
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ +H DL+ +N+L+ + + DFGLA+ + ++
Sbjct: 129 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 164
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 86/158 (54%), Gaps = 17/158 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V+ G + VAVK +LKQ S +F++E ++ ++H+ L+++ +
Sbjct: 26 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 83 TQEPI------YIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIE- 131
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ +H DL+ +N+L+ + + DFGLA+ + ++
Sbjct: 132 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 167
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 710 SNMIGQGRFGTVYKGILGDDE---MVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLI 765
+ +IG+G FG VY G L D++ + AVK +N + G F++E +++ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
++ IC + EG +V YM++G L +++ V+ L + + VA
Sbjct: 93 SLLGICLRS--EGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 143
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIK 885
+++L VH DL N +LD V DFGLA+ + + D + + +K
Sbjct: 144 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIKIIT 769
+G+G FG V VA+K+IN K S E LR +RH ++IK+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 770 ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYL 829
+ S D E + +V EY N L D++ Q + E Q+ + SA+EY
Sbjct: 82 VIKSKD-EII----MVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQ------IISAVEYC 129
Query: 830 HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
H H +VH DLKP N+LLD + + DFGL+ +++
Sbjct: 130 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 165
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 713 IGQGRFG-TVYKGILGDDE----MVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V +G D+ V V V LK K +SE E ++ I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWL---------------HQSNDQVEVR 808
+I ++ C+ +G + ++ EY G+L ++L H +Q+ +
Sbjct: 137 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
L ++ A VA +EYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 192 DL-----VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-- 241
Query: 869 HHLDIASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
HH+D KT + + +K ++AP F +YTH
Sbjct: 242 HHIDYYKKTTNGRLPVK----WMAPEALFDRIYTH 272
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 713 IGQGRFG-TVYKGILGDDE----MVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V +G D+ V V V LK K +SE E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWL---------------HQSNDQVEVR 808
+I ++ C+ +G + ++ EY G+L ++L H +Q+ +
Sbjct: 96 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
L ++ A VA +EYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 151 DL-----VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-- 200
Query: 869 HHLDIASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
HH+D KT + + +K ++AP F +YTH
Sbjct: 201 HHIDXXKKTTNGRLPVK----WMAPEALFDRIYTH 231
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 24/188 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI--RHRNLIKIITI 770
IG+GRFG V++G +E VAVK+ + +++ +S+ E E + + RH N++ I
Sbjct: 17 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 71
Query: 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
+ + LV +Y E+GSL D+L++ VE +I+ +A+ AS + +LH
Sbjct: 72 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVE----GMIK---LALSTASGLAHLH 123
Query: 831 HHC-----QPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIK 885
+P + H DLK N+L+ + + D GLA + D P+ +G K
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 182
Query: 886 GTVGYVAP 893
Y+AP
Sbjct: 183 ---RYMAP 187
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIKIIT 769
+G+G FG V VA+K+IN K S E LR +RH ++IK+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 770 ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYL 829
+ S D E + +V EY N L D++ Q + E Q+ + SA+EY
Sbjct: 72 VIKSKD-EII----MVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQ------IISAVEYC 119
Query: 830 HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
H H +VH DLKP N+LLD + + DFGL+ +++
Sbjct: 120 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 155
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 710 SNMIGQGRFGTVYKGILGDDE---MVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLI 765
+ +IG+G FG VY G L D++ + AVK +N + G F++E +++ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
++ IC + EG +V YM++G L +++ V+ L + + VA
Sbjct: 96 SLLGICLRS--EGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 146
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIK 885
+++L VH DL N +LD V DFGLA+ + + D + + +K
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK 203
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 711 NMIGQGRFGTVYKGILGDDE---MVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLIK 766
+IG+G FG VY G L D++ + AVK +N + G F++E +++ H N++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
++ IC + EG +V YM++G L +++ V+ L + + VA +
Sbjct: 115 LLGICLRS--EGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 165
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+YL VH DL N +LD V DFGLA+
Sbjct: 166 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIKIIT 769
+G+G FG V VA+K+IN K S E LR +RH ++IK+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 770 ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYL 829
+ S D E + +V EY N L D++ Q + E Q+ + SA+EY
Sbjct: 76 VIKSKD-EII----MVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQ------IISAVEYC 123
Query: 830 HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
H H +VH DLKP N+LLD + + DFGL+ +++
Sbjct: 124 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 159
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 23/180 (12%)
Query: 713 IGQGRFGTVYKG-----ILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKI 767
+G+G FG V+ + D+M+VAVK + + A + F E E L ++H+++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWLH---------QSNDQVEVRKLSLIQRMNI 818
+C+ EG +VFEYM +G L +L + V L L Q + +
Sbjct: 86 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKT 877
A VA+ + YL VH DL N L+ +V +GDFG+++ S + + +T
Sbjct: 141 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 711 NMIGQGRFGTVYKGILGDDE---MVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLIK 766
+IG+G FG VY G L D++ + AVK +N + G F++E +++ H N++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
++ IC + EG +V YM++G L +++ V+ L + + VA +
Sbjct: 114 LLGICLRS--EGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 164
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+YL VH DL N +LD V DFGLA+
Sbjct: 165 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI--RHRNLIKIITI 770
IG+GRFG V++G +E VAVK+ + +++ +S+ E E + + RH N++ I
Sbjct: 14 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 68
Query: 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
+ + LV +Y E+GSL D+L++ VE + +A+ AS + +LH
Sbjct: 69 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVE-------GMIKLALSTASGLAHLH 120
Query: 831 HHC-----QPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIK 885
+P + H DLK N+L+ + + D GLA + D P+ +G K
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 179
Query: 886 GTVGYVAP 893
Y+AP
Sbjct: 180 ---RYMAP 184
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 711 NMIGQGRFGTVYKGILGDDE---MVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLIK 766
+IG+G FG VY G L D++ + AVK +N + G F++E +++ H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
++ IC + EG +V YM++G L +++ V+ L + + VA +
Sbjct: 95 LLGICLRS--EGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 145
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+YL VH DL N +LD V DFGLA+
Sbjct: 146 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 711 NMIGQGRFGTVYKGILGDDE---MVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLIK 766
+IG+G FG VY G L D++ + AVK +N + G F++E +++ H N++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
++ IC + EG +V YM++G L +++ V+ L + + VA +
Sbjct: 88 LLGICLRS--EGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 138
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+YL VH DL N +LD V DFGLA+
Sbjct: 139 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 711 NMIGQGRFGTVYKGILGDDE---MVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLIK 766
+IG+G FG VY G L D++ + AVK +N + G F++E +++ H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
++ IC + EG +V YM++G L +++ V+ L + + VA +
Sbjct: 95 LLGICLRS--EGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 145
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+YL VH DL N +LD V DFGLA+
Sbjct: 146 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 711 NMIGQGRFGTVYKGILGDDE---MVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLIK 766
+IG+G FG VY G L D++ + AVK +N + G F++E +++ H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
++ IC + EG +V YM++G L +++ V+ L + + VA +
Sbjct: 96 LLGICLRS--EGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 146
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+YL VH DL N +LD V DFGLA+
Sbjct: 147 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 711 NMIGQGRFGTVYKGILGDDE---MVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLIK 766
+IG+G FG VY G L D++ + AVK +N + G F++E +++ H N++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
++ IC + EG +V YM++G L +++ V+ L + + VA +
Sbjct: 91 LLGICLRS--EGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 141
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+YL VH DL N +LD V DFGLA+
Sbjct: 142 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 713 IGQGRFG-TVYKGILGDDE----MVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V +G D+ V V V LK K +SE E ++ I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWL---------------HQSNDQVEVR 808
+I ++ C+ +G + ++ EY G+L ++L H +Q+ +
Sbjct: 81 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
L ++ A VA +EYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 136 DL-----VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-- 185
Query: 869 HHLDIASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
HH+D KT + + +K ++AP F +YTH
Sbjct: 186 HHIDYYKKTTNGRLPVK----WMAPEALFDRIYTH 216
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 711 NMIGQGRFGTVYKGILGDDE---MVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLIK 766
+IG+G FG VY G L D++ + AVK +N + G F++E +++ H N++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
++ IC + EG +V YM++G L +++ V+ L + + VA +
Sbjct: 94 LLGICLRS--EGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 144
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+YL VH DL N +LD V DFGLA+
Sbjct: 145 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 711 NMIGQGRFGTVYKGILGDDE---MVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLIK 766
+IG+G FG VY G L D++ + AVK +N + G F++E +++ H N++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
++ IC + EG +V YM++G L +++ V+ L + + VA +
Sbjct: 93 LLGICLRS--EGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 143
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+YL VH DL N +LD V DFGLA+
Sbjct: 144 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 711 NMIGQGRFGTVYKGILGDDE---MVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLIK 766
+IG+G FG VY G L D++ + AVK +N + G F++E +++ H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
++ IC + EG +V YM++G L +++ V+ L + + VA +
Sbjct: 96 LLGICLRS--EGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 146
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+YL VH DL N +LD V DFGLA+
Sbjct: 147 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 34/208 (16%)
Query: 693 PMVSYAELSKA--TSEFSSSNMIGQGRFGTVYKGIL---GDDEMVVAVKVINL----KQK 743
P + E +K + S ++G G FG V G L E+ VA+K + + KQ+
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 744 GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA----LVFEYMENGSLEDWLH 799
+ F+ E + H N+I++ EGV K+ +V E MENGSL+ +L
Sbjct: 91 ---RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEXMENGSLDSFLR 138
Query: 800 QSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859
+ + Q ++IQ + + +AS ++YL VH DL N+L++ ++V V D
Sbjct: 139 KHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---AVHRDLAARNILINSNLVCKVSD 190
Query: 860 FGLAKFLSNHHLDIASKTPSSSIGIKGT 887
FGL++ L + + A T I I+ T
Sbjct: 191 FGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIR 760
ATS + IG G +GTVYK VA+K + + ++G S V E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 761 ---HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMN 817
H N+++++ +C+++ + LVFE+++ L +L D+ L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL----DKAPPPGLPAETIKD 116
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
+ +++LH +C +VH DLKP N+L+ + DFGLA+ S
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 713 IGQGRFG-TVYKGILGDDE----MVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V +G D+ V V V LK K +SE E ++ I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWL---------------HQSNDQVEVR 808
+I ++ C+ +G + ++ EY G+L ++L H +Q+ +
Sbjct: 88 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
L ++ A VA +EYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 143 DL-----VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-- 192
Query: 869 HHLDIASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
HH+D KT + + +K ++AP F +YTH
Sbjct: 193 HHIDYYKKTTNGRLPVK----WMAPEALFDRIYTH 223
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 713 IGQGRFG-TVYKGILGDDE----MVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V +G D+ V V V LK K +SE E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWL---------------HQSNDQVEVR 808
+I ++ C+ +G + ++ EY G+L ++L H +Q+ +
Sbjct: 96 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
L ++ A VA +EYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 151 DL-----VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-- 200
Query: 869 HHLDIASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
HH+D KT + + +K ++AP F +YTH
Sbjct: 201 HHIDYYKKTTNGRLPVK----WMAPEALFDRIYTH 231
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 713 IGQGRFG-TVYKGILGDDE----MVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V +G D+ V V V LK K +SE E ++ I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWL---------------HQSNDQVEVR 808
+I ++ C+ +G + ++ EY G+L ++L H +Q+ +
Sbjct: 85 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
L ++ A VA +EYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 140 DL-----VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-- 189
Query: 869 HHLDIASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
HH+D KT + + +K ++AP F +YTH
Sbjct: 190 HHIDYYKKTTNGRLPVK----WMAPEALFDRIYTH 220
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 713 IGQGRFG-TVYKGILGDDE----MVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V +G D+ V V V LK K +SE E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWL---------------HQSNDQVEVR 808
+I ++ C+ +G + ++ EY G+L ++L H +Q+ +
Sbjct: 96 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
L ++ A VA +EYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 151 DL-----VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-- 200
Query: 869 HHLDIASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
HH+D KT + + +K ++AP F +YTH
Sbjct: 201 HHIDYYKKTTNGRLPVK----WMAPEALFDRIYTH 231
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIR 760
ATS + IG G +GTVYK VA+K + + ++G S V E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 761 ---HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMN 817
H N+++++ +C+++ + LVFE+++ L +L D+ L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL----DKAPPPGLPAETIKD 116
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
+ +++LH +C +VH DLKP N+L+ + DFGLA+ S
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIR 760
ATS + IG G +GTVYK VA+K + + ++G S V E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 761 ---HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMN 817
H N+++++ +C+++ + LVFE+++ L +L D+ L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL----DKAPPPGLPAETIKD 116
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
+ +++LH +C +VH DLKP N+L+ + DFGLA+ S
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 27/224 (12%)
Query: 696 SYAELSKATSEFSSS---------NMIGQGRFGTVYKGIL---GDDEMVVAVKVINL-KQ 742
+Y E +A F+ +IG G G V G L G ++ VA+K +
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 743 KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN 802
+ + F+SE + H N+I++ + + +V EYMENGSL+ +L +
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL-----AMIVTEYMENGSLDTFLRTHD 145
Query: 803 DQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862
Q +++Q + + V + + YL VH DL NVL+D ++V V DFGL
Sbjct: 146 GQ-----FTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGL 197
Query: 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFMLYTHIPSF 906
++ L + D A T I I+ T + F + + SF
Sbjct: 198 SRVLEDDP-DAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSF 240
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 713 IGQGRFG-TVYKGILGDDE----MVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V +G D+ V V V LK K +SE E ++ I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWL---------------HQSNDQVEVR 808
+I ++ C+ +G + ++ EY G+L ++L H +Q+ +
Sbjct: 89 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
L ++ A VA +EYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 144 DL-----VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-- 193
Query: 869 HHLDIASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
HH+D KT + + +K ++AP F +YTH
Sbjct: 194 HHIDYYKKTTNGRLPVK----WMAPEALFDRIYTH 224
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKS-FVSECEALRNIRHRNLIKI 767
+G+G FG V Y +VAVK + +S + E + LR + H ++IK
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIE 827
C G LV EY+ GSL D+L + + + L Q + A + +
Sbjct: 99 KGCCEDA---GAASLQLVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMA 148
Query: 828 YLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHH 870
YLH +H DL NVLLD D + +GDFGLAK + H
Sbjct: 149 YLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 34/208 (16%)
Query: 693 PMVSYAELSKA--TSEFSSSNMIGQGRFGTVYKGIL---GDDEMVVAVKVINL----KQK 743
P + E +K + S ++G G FG V G L E+ VA+K + + KQ+
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 744 GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA----LVFEYMENGSLEDWLH 799
+ F+ E + H N+I++ EGV K+ +V E MENGSL+ +L
Sbjct: 91 ---RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEXMENGSLDSFLR 138
Query: 800 QSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859
+ + Q ++IQ + + +AS ++YL VH DL N+L++ ++V V D
Sbjct: 139 KHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSD 190
Query: 860 FGLAKFLSNHHLDIASKTPSSSIGIKGT 887
FGL++ L + + A T I I+ T
Sbjct: 191 FGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 32/195 (16%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGIL---GDDEMVVAVKVINL----KQKGASKSFVSECEAL 756
+ S ++G G FG V G L E+ VA+K + + KQ+ + F+ E +
Sbjct: 15 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIM 71
Query: 757 RNIRHRNLIKIITICSSTDFEGVDFKA----LVFEYMENGSLEDWLHQSNDQVEVRKLSL 812
H N+I++ EGV K+ +V E MENGSL+ +L + + Q ++
Sbjct: 72 GQFDHPNIIRL---------EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-----FTV 117
Query: 813 IQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
IQ + + +AS ++YL VH DL N+L++ ++V V DFGL++ L + +
Sbjct: 118 IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-E 173
Query: 873 IASKTPSSSIGIKGT 887
A T I I+ T
Sbjct: 174 AAYTTRGGKIPIRWT 188
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 27/207 (13%)
Query: 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRH 761
+ S+F ++GQG FG V K D A+K I ++ S + +SE L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVMLLASLNH 61
Query: 762 RNLIKIITICSSTD-----FEGVDFKALVF---EYMENGSLEDWLHQSN-DQVEVRKLSL 812
+ +++ V K+ +F EY ENG+L D +H N +Q L
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 813 IQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
++ + A+ Y+H ++H DLKP N+ +D +GDFGLAK + + LD
Sbjct: 122 FRQ------ILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNV-HRSLD 171
Query: 873 I----ASKTPSSSIGIKGTVG---YVA 892
I + P SS + +G YVA
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVA 198
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 713 IGQGRFG-TVYKGILGDDE----MVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V +G D+ V V V LK K +SE E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWL---------------HQSNDQVEVR 808
+I ++ C+ +G + ++ EY G+L ++L H +Q+ +
Sbjct: 96 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
L ++ A VA +EYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 151 DL-----VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-- 200
Query: 869 HHLDIASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
HH+D KT + + +K ++AP F +YTH
Sbjct: 201 HHIDYYKKTTNGRLPVK----WMAPEALFDRIYTH 231
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 27/224 (12%)
Query: 696 SYAELSKATSEFSSS---------NMIGQGRFGTVYKGIL---GDDEMVVAVKVINL-KQ 742
+Y E +A F+ +IG G G V G L G ++ VA+K +
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 743 KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN 802
+ + F+SE + H N+I++ + + +V EYMENGSL+ +L +
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL-----AMIVTEYMENGSLDTFLRTHD 145
Query: 803 DQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862
Q +++Q + + V + + YL VH DL NVL+D ++V V DFGL
Sbjct: 146 GQ-----FTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGL 197
Query: 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFMLYTHIPSF 906
++ L + D A T I I+ T + F + + SF
Sbjct: 198 SRVLEDDP-DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSF 240
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG-ASKSFVSECEALRNIRHRN 763
++F +G+G FG V++ D+ A+K I L + A + + E +AL + H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 764 LIKIITIC----SSTDFEGVDFKALVFEYME---NGSLEDWLHQSNDQVEVRKLSLIQRM 816
+++ ++ + K ++ M+ +L+DW++ +E R+ S+ +
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN-GRCTIEERERSVC--L 121
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASK 876
+I + +A A+E+LH ++H DLKPSN+ D V VGDFGL + +
Sbjct: 122 HIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 877 TP----SSSIGIKGTVGYVAP 893
TP + G GT Y++P
Sbjct: 179 TPMPAYARHTGQVGTKLYMSP 199
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI--RHRNLIKIITI 770
IG+GRFG V++G +E VAVK+ + +++ +S+ E E + + RH N++ I
Sbjct: 12 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 66
Query: 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
+ + LV +Y E+GSL D+L++ VE + +A+ AS + +LH
Sbjct: 67 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVE-------GMIKLALSTASGLAHLH 118
Query: 831 HHC-----QPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIK 885
+P + H DLK N+L+ + + D GLA + D P+ +G K
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 177
Query: 886 GTVGYVAP 893
Y+AP
Sbjct: 178 ---RYMAP 182
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI--RHRNLIKIITI 770
IG+GRFG V++G +E VAVK+ + +++ +S+ E E + + RH N++ I
Sbjct: 11 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 65
Query: 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
+ + LV +Y E+GSL D+L++ VE + +A+ AS + +LH
Sbjct: 66 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVE-------GMIKLALSTASGLAHLH 117
Query: 831 HHC-----QPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIK 885
+P + H DLK N+L+ + + D GLA + D P+ +G K
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 176
Query: 886 GTVGYVAP 893
Y+AP
Sbjct: 177 ---RYMAP 181
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 86/158 (54%), Gaps = 17/158 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V+ G + VAVK +LKQ S +F++E ++ ++H+ L+++ +
Sbjct: 17 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 74 TQEPI------YIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIE- 122
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ +H +L+ +N+L+ + + DFGLA+ + ++
Sbjct: 123 --ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDN 158
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 35/199 (17%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMV---VAVKVIN---LKQKGASKSFVSECEALR 757
+ + ++G+G FG V IL D++ AVKVI+ +KQK +S + E + L+
Sbjct: 31 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 758 NIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMN 817
+ H N++K+ FE + LV E G L D + + ++ S +
Sbjct: 88 QLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFD------EIISRKRFSEVDAAR 136
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY---DMVAHVGDFGLAKFLSNHHLDIA 874
I V S I Y+H + +VH DLKP N+LL+ D + DFGL+ H + A
Sbjct: 137 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST-----HFE-A 187
Query: 875 SKTPSSSIGIKGTVGYVAP 893
SK I GT Y+AP
Sbjct: 188 SKKMKDKI---GTAYYIAP 203
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 25/174 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-------KSFVSECEA 755
A +E IG+G FG V+KG L D+ VVA+K + L + F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 756 LRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQR 815
+ N+ H N++K+ + + +V E++ G D H+ D+ K S+ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCG---DLYHRLLDKAHPIKWSV--K 124
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL-----DYDMVAHVGDFGLAK 864
+ + +D+A IEY+ + PP+VH DL+ N+ L + + A V DFG ++
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ 177
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK-QKGASKSFVSECEALRNIRH 761
++S+F +G G + TVYKG+ + VA+K + L ++G + + E ++ ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 762 RNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821
N++++ + + + LVFE+M+N L+ ++ R L L
Sbjct: 63 ENIVRLYDVIHTE-----NKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H + ++H DLKP N+L++ +GDFGLA+
Sbjct: 117 LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 26/186 (13%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V G + VAVK+I K+ S+ F E + + + H L+K +C
Sbjct: 16 LGSGQFGVVKLGKW-KGQYDVAVKMI--KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 772 SSTDFEGVDFKA-LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
S ++ +V EY+ NG L ++L +E +L + + DV + +L
Sbjct: 73 SK------EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL-----LEMCYDVCEGMAFLE 121
Query: 831 HHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGY 890
H +H DL N L+D D+ V DFG+ +++ + SS+G K V +
Sbjct: 122 SH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-------VSSVGTKFPVKW 171
Query: 891 VAPGKF 896
AP F
Sbjct: 172 SAPEVF 177
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 25/174 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-------KSFVSECEA 755
A +E IG+G FG V+KG L D+ VVA+K + L + F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 756 LRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQR 815
+ N+ H N++K+ + + +V E++ G D H+ D+ K S+ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCG---DLYHRLLDKAHPIKWSV--K 124
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL-----DYDMVAHVGDFGLAK 864
+ + +D+A IEY+ + PP+VH DL+ N+ L + + A V DF L++
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ 177
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKG--ILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG I +++ + V ++ L++ A+K + E + ++
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 109 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 157
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 158 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 201
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 30/190 (15%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECE--ALRNIRHRNLIKIITIC 771
+GRFG V+K L ++ VAVK+ ++ K +S+ +E E +L ++H N+++ I
Sbjct: 33 ARGRFGCVWKAQLLNE--YVAVKIFPIQDK---QSWQNEYEVYSLPGMKHENILQFIGAE 87
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
VD L+ + E GSL D+L + +S + +IA +A + YLH
Sbjct: 88 KRGTSVDVDL-WLITAFHEKGSLSDFL-------KANVVSWNELCHIAETMARGLAYLHE 139
Query: 832 HC-------QPPMVHGDLKPSNVLLDYDMVAHVGDFGLA-KFLSNHHLDIASKTPSSSIG 883
+P + H D+K NVLL ++ A + DFGLA KF A K+ + G
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE-------AGKSAGDTHG 192
Query: 884 IKGTVGYVAP 893
GT Y+AP
Sbjct: 193 QVGTRRYMAP 202
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 26/192 (13%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
E ++G+G FG V K + VA+K ++ + K+F+ E L + H N++
Sbjct: 10 EIEVEEVVGRGAFGVVCKAKWRAKD--VAIK--QIESESERKAFIVELRQLSRVNHPNIV 65
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
K+ C ++ LV EY E GSL + LH + + + M+ + +
Sbjct: 66 KLYGAC-------LNPVCLVMEYAEGGSLYNVLHGAEP---LPYYTAAHAMSWCLQCSQG 115
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDY-DMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGI 884
+ YLH ++H DLKP N+LL V + DFG A + H +
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN-----------N 164
Query: 885 KGTVGYVAPGKF 896
KG+ ++AP F
Sbjct: 165 KGSAAWMAPEVF 176
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 35/199 (17%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMV---VAVKVI---NLKQKGASKSFVSECEALR 757
+ + ++G+G FG V IL D++ AVKVI +KQK +S + E + L+
Sbjct: 48 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 104
Query: 758 NIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMN 817
+ H N++K+ FE + LV E G L D + + ++ S +
Sbjct: 105 QLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAAR 153
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---YDMVAHVGDFGLAKFLSNHHLDIA 874
I V S I Y+H + +VH DLKP N+LL+ D + DFGL+ A
Sbjct: 154 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE------A 204
Query: 875 SKTPSSSIGIKGTVGYVAP 893
SK I GT Y+AP
Sbjct: 205 SKKMKDKI---GTAYYIAP 220
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 35/199 (17%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMV---VAVKVI---NLKQKGASKSFVSECEALR 757
+ + ++G+G FG V IL D++ AVKVI +KQK +S + E + L+
Sbjct: 49 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 105
Query: 758 NIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMN 817
+ H N++K+ FE + LV E G L D + + ++ S +
Sbjct: 106 QLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAAR 154
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---YDMVAHVGDFGLAKFLSNHHLDIA 874
I V S I Y+H + +VH DLKP N+LL+ D + DFGL+ A
Sbjct: 155 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE------A 205
Query: 875 SKTPSSSIGIKGTVGYVAP 893
SK I GT Y+AP
Sbjct: 206 SKKMKDKI---GTAYYIAP 221
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 686 SPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--- 742
+P ++P++ + ++ ++IG+G FG V K + D + + + +K+
Sbjct: 3 NPDPTIYPVLDW-------NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS 55
Query: 743 KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQS 801
K + F E E L + H N+I ++ C E + L EY +G+L D+L +S
Sbjct: 56 KDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKS 110
Query: 802 N----------DQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY 851
LS Q ++ A DVA ++YL Q +H DL N+L+
Sbjct: 111 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGE 167
Query: 852 DMVAHVGDFGLAK 864
+ VA + DFGL++
Sbjct: 168 NYVAKIADFGLSR 180
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 29/198 (14%)
Query: 681 KSVDTSPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL 740
+ V +P ++P++ + ++ ++IG+G FG V K + D + + + +
Sbjct: 5 RKVKNNPDPTIYPVLDW-------NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM 57
Query: 741 KQ---KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLED 796
K+ K + F E E L + H N+I ++ C E + L EY +G+L D
Sbjct: 58 KEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRGYLYLAIEYAPHGNLLD 112
Query: 797 WLHQSN----------DQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSN 846
+L +S LS Q ++ A DVA ++YL Q +H +L N
Sbjct: 113 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARN 169
Query: 847 VLLDYDMVAHVGDFGLAK 864
+L+ + VA + DFGL++
Sbjct: 170 ILVGENYVAKIADFGLSR 187
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 35/199 (17%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMV---VAVKVIN---LKQKGASKSFVSECEALR 757
+ + ++G+G FG V IL D++ AVKVI+ +KQK +S + E + L+
Sbjct: 25 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 758 NIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMN 817
+ H N++K+ FE + LV E G L D + + ++ S +
Sbjct: 82 QLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAAR 130
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---YDMVAHVGDFGLAKFLSNHHLDIA 874
I V S I Y+H + +VH DLKP N+LL+ D + DFGL+ A
Sbjct: 131 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE------A 181
Query: 875 SKTPSSSIGIKGTVGYVAP 893
SK I GT Y+AP
Sbjct: 182 SKKMKDKI---GTAYYIAP 197
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 26/192 (13%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
E ++G+G FG V K + VA+K ++ + K+F+ E L + H N++
Sbjct: 9 EIEVEEVVGRGAFGVVCKAKWRAKD--VAIK--QIESESERKAFIVELRQLSRVNHPNIV 64
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
K+ C ++ LV EY E GSL + LH + + + M+ + +
Sbjct: 65 KLYGAC-------LNPVCLVMEYAEGGSLYNVLHGAEP---LPYYTAAHAMSWCLQCSQG 114
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDY-DMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGI 884
+ YLH ++H DLKP N+LL V + DFG A + H +
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN-----------N 163
Query: 885 KGTVGYVAPGKF 896
KG+ ++AP F
Sbjct: 164 KGSAAWMAPEVF 175
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKG--ILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG I +++ + V + L++ A+K + E + ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 79 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 127
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 128 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 171
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKG--ILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG I +++ + V + L++ A+K + E + ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 125
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG+ +++ + V + L++ A+K + E + ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 76 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 124
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 125 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 168
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 686 SPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--- 742
+P ++P++ + ++ ++IG+G FG V K + D + + + +K+
Sbjct: 13 NPDPTIYPVLDW-------NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS 65
Query: 743 KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQS 801
K + F E E L + H N+I ++ C E + L EY +G+L D+L +S
Sbjct: 66 KDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKS 120
Query: 802 N----------DQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY 851
LS Q ++ A DVA ++YL Q +H DL N+L+
Sbjct: 121 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGE 177
Query: 852 DMVAHVGDFGLAK 864
+ VA + DFGL++
Sbjct: 178 NYVAKIADFGLSR 190
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG+ +++ + V + L++ A+K + E + ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 126
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG+ +++ + V + L++ A+K + E + ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 123
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG+ +++ + V + L++ A+K + E + ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 76 DNPHVCRLLGICLTSTVQ------LIMQLMPFGXLLDYVREHKDNIGSQYL-----LNWC 124
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 125 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 168
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 29/190 (15%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRN--IRHRNLIKIITIC 771
+GRFG V+K L +D VAVK+ L+ K +S+ SE E ++H NL++ I
Sbjct: 24 ARGRFGCVWKAQLMND--FVAVKIFPLQDK---QSWQSEREIFSTPGMKHENLLQFIAAE 78
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
V+ L+ + + GSL D+L + ++ + ++A ++ + YLH
Sbjct: 79 KRGSNLEVEL-WLITAFHDKGSLTDYLKGNI-------ITWNELCHVAETMSRGLSYLHE 130
Query: 832 HC--------QPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIG 883
+P + H D K NVLL D+ A + DFGLA K P + G
Sbjct: 131 DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFE------PGKPPGDTHG 184
Query: 884 IKGTVGYVAP 893
GT Y+AP
Sbjct: 185 QVGTRRYMAP 194
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 84/157 (53%), Gaps = 17/157 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKIITIC 771
+G G+ G V+ G + VAVK +LKQ S +F++E ++ ++H+ L+++ +
Sbjct: 21 LGAGQAGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 78 TQEPI------YIITEYMENGSLVDFLKTPSGI----KLTINKLLDMAAQIAEGMAFIE- 126
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
+ +H DL+ +N+L+ + + DFGLA+ + +
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 32/190 (16%)
Query: 711 NMIGQGRFGTVYKGILGDDEMVVAVKVI------NLKQKGASKSFVSECEALRNIRHRNL 764
IG+G FG V+ G L D +VAVK +LK K F+ E L+ H N+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-----FLQEARILKQYSHPNI 174
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+++I +C+ +V E ++ G +L ++ V+ L + + D A+
Sbjct: 175 VRLIGVCTQK-----QPIYIVMELVQGGDFLTFLRTEGARLRVKTL-----LQMVGDAAA 224
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGI 884
+EYL C +H DL N L+ V + DFG+++ + A ++S G+
Sbjct: 225 GMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-------EEADGVXAASGGL 274
Query: 885 KGT-VGYVAP 893
+ V + AP
Sbjct: 275 RQVPVKWTAP 284
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 25/189 (13%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKS----FVSECEALRNIRHRNLIKII 768
IG+G F TVYKG+ D E V V L+ + +KS F E E L+ ++H N+++
Sbjct: 34 IGRGSFKTVYKGL--DTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
ST +G LV E +G+L+ +L + +V K+ +++ + + +++
Sbjct: 92 DSWEST-VKGKKCIVLVTELXTSGTLKTYL----KRFKVXKIKVLR--SWCRQILKGLQF 144
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDM-VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGT 887
LH PP++H DLK N+ + +GD GLA K S + + GT
Sbjct: 145 LHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----------KRASFAKAVIGT 193
Query: 888 VGYVAPGKF 896
+ AP +
Sbjct: 194 PEFXAPEXY 202
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 26/196 (13%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V G + VA+K+I K+ S+ F+ E + + N+ H L+++ +C
Sbjct: 32 LGTGQFGVVKYGKW-RGQYDVAIKMI--KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ + F ++ EYM NG L ++L + + + ++L + + DV A+EYL
Sbjct: 89 TK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE- 137
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYV 891
+H DL N L++ V V DFGL+++ + +SS+G K V +
Sbjct: 138 --SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY-------VLDDEETSSVGSKFPVRWS 188
Query: 892 APGKFFMLYTHIPSFS 907
P ++Y+ S S
Sbjct: 189 PPE--VLMYSKFSSKS 202
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 27/207 (13%)
Query: 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRH 761
+ S+F ++GQG FG V K D A+K I ++ S + +SE L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVMLLASLNH 61
Query: 762 RNLIKIITIC-SSTDF----EGVDFKALVF---EYMENGSLEDWLHQSN-DQVEVRKLSL 812
+ +++ +F V K+ +F EY EN +L D +H N +Q L
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 813 IQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
++ + A+ Y+H ++H DLKP N+ +D +GDFGLAK + + LD
Sbjct: 122 FRQ------ILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNV-HRSLD 171
Query: 873 I----ASKTPSSSIGIKGTVG---YVA 892
I + P SS + +G YVA
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVA 198
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 24/160 (15%)
Query: 711 NMIGQGRFGTVYKGILGDDEMVVAVKVI------NLKQKGASKSFVSECEALRNIRHRNL 764
IG+G FG V+ G L D +VAVK +LK K F+ E L+ H N+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-----FLQEARILKQYSHPNI 174
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+++I +C+ +V E ++ G +L ++ V+ L + + D A+
Sbjct: 175 VRLIGVCTQK-----QPIYIVMELVQGGDFLTFLRTEGARLRVKTL-----LQMVGDAAA 224
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+EYL C +H DL N L+ V + DFG+++
Sbjct: 225 GMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKS-FVSECEALRNIRHRNLIKI 767
+G+G FG V Y +VAVK + +S + E + LR + H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIE 827
C +G LV EY+ GSL D+L + + + L Q + A + +
Sbjct: 82 KGCCED---QGEKSLQLVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMA 131
Query: 828 YLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHH 870
YLH +H +L NVLLD D + +GDFGLAK + H
Sbjct: 132 YLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH 171
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 26/196 (13%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V G + VA+K+I K+ S+ F+ E + + N+ H L+++ +C
Sbjct: 23 LGTGQFGVVKYGKW-RGQYDVAIKMI--KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ + F ++ EYM NG L ++L + + + ++L + + DV A+EYL
Sbjct: 80 TK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE- 128
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYV 891
+H DL N L++ V V DFGL++++ + +SS+G K V +
Sbjct: 129 --SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVRWS 179
Query: 892 APGKFFMLYTHIPSFS 907
P ++Y+ S S
Sbjct: 180 PPE--VLMYSKFSSKS 193
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 26/196 (13%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V G + VA+K+I K+ S+ F+ E + + N+ H L+++ +C
Sbjct: 16 LGTGQFGVVKYGKW-RGQYDVAIKMI--KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ + F ++ EYM NG L ++L + + + ++L + + DV A+EYL
Sbjct: 73 TK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE- 121
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYV 891
+H DL N L++ V V DFGL++++ + +SS+G K V +
Sbjct: 122 --SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVRWS 172
Query: 892 APGKFFMLYTHIPSFS 907
P ++Y+ S S
Sbjct: 173 PPE--VLMYSKFSSKS 186
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 26/196 (13%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V G + VA+K+I K+ S+ F+ E + + N+ H L+++ +C
Sbjct: 17 LGTGQFGVVKYGKW-RGQYDVAIKMI--KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ + F ++ EYM NG L ++L + + + ++L + + DV A+EYL
Sbjct: 74 TK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE- 122
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYV 891
+H DL N L++ V V DFGL++++ + +SS+G K V +
Sbjct: 123 --SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVRWS 173
Query: 892 APGKFFMLYTHIPSFS 907
P ++Y+ S S
Sbjct: 174 PPE--VLMYSKFSSKS 187
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 26/196 (13%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V G + VA+K+I K+ S+ F+ E + + N+ H L+++ +C
Sbjct: 32 LGTGQFGVVKYGKW-RGQYDVAIKMI--KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ + F ++ EYM NG L ++L + + + ++L + + DV A+EYL
Sbjct: 89 TK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE- 137
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYV 891
+H DL N L++ V V DFGL++++ + +SS+G K V +
Sbjct: 138 --SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVRWS 188
Query: 892 APGKFFMLYTHIPSFS 907
P ++Y+ S S
Sbjct: 189 PPE--VLMYSKFSSKS 202
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 26/196 (13%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V G + VA+K+I K+ S+ F+ E + + N+ H L+++ +C
Sbjct: 12 LGTGQFGVVKYGKW-RGQYDVAIKMI--KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ + F ++ EYM NG L ++L + + + ++L + + DV A+EYL
Sbjct: 69 TK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE- 117
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYV 891
+H DL N L++ V V DFGL++++ + +SS+G K V +
Sbjct: 118 --SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVRWS 168
Query: 892 APGKFFMLYTHIPSFS 907
P ++Y+ S S
Sbjct: 169 PPE--VLMYSKFSSKS 182
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKG--ILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG I +++ + V + L++ A+K + E + ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 130
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKG--ILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG I +++ + V + L++ A+K + E + ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 125
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKG--ILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG I +++ + V + L++ A+K + E + ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 126
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG+ +++ + V + L++ A+K + E + ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 123
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG+ +++ + V + L++ A+K + E + ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 126
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG+ +++ + V + L++ A+K + E + ++
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 100 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 148
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 149 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 192
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKG--ILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG I +++ + V + L++ A+K + E + ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGXLLDYVREHKDNIGSQYL-----LNWC 123
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKG--ILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG I +++ + V + L++ A+K + E + ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 123
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKG--ILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG I +++ + V + L++ A+K + E + ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 126
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG+ +++ + V + L++ A+K + E + ++
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 81 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 129
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 130 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 173
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG+ +++ + V + L++ A+K + E + ++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 72 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 120
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 121 VQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 164
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 16/175 (9%)
Query: 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK-----SFVSECEA 755
S ATS + IG G +GTVYK VA+K + + G S V E
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 756 LRNIR---HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSL 812
LR + H N+++++ +C+++ + LVFE+++ L +L D+ L
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL----DKAPPPGLPA 119
Query: 813 IQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
++ +++LH +C +VH DLKP N+L+ + DFGLA+ S
Sbjct: 120 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 171
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 89/199 (44%), Gaps = 35/199 (17%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMV---VAVKVIN---LKQKGASKSFVSECEALR 757
+ + ++G+G FG V IL D++ AVKVI+ +KQK +S + E + L+
Sbjct: 25 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 758 NIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMN 817
+ H N+ K+ FE + LV E G L D + + ++ S +
Sbjct: 82 QLDHPNIXKLYEF-----FEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAAR 130
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---YDMVAHVGDFGLAKFLSNHHLDIA 874
I V S I Y H + +VH DLKP N+LL+ D + DFGL+ A
Sbjct: 131 IIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE------A 181
Query: 875 SKTPSSSIGIKGTVGYVAP 893
SK I GT Y+AP
Sbjct: 182 SKKXKDKI---GTAYYIAP 197
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKS-FVSECEALRNIRHRNLIKI 767
+G+G FG V Y +VAVK + +S + E + LR + H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIE 827
C +G LV EY+ GSL D+L + + + L Q + A + +
Sbjct: 82 KGCCED---QGEKSLQLVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMA 131
Query: 828 YLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHH 870
YLH +H +L NVLLD D + +GDFGLAK + H
Sbjct: 132 YLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH 171
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG+ +++ + V + L++ A+K + E + ++
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 85 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 133
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 134 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 177
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 20/160 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVIN---LKQKGASKSFVSECEALRNIRHRNLIKII- 768
+G+G FG V + VA+K I+ LK+ E L+ +RH ++IK+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
I + TD +V EY G L D++ VE ++++ + + AIEY
Sbjct: 77 VITTPTDI------VMVIEYA-GGELFDYI------VEKKRMTEDEGRRFFQQIICAIEY 123
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
H H +VH DLKP N+LLD ++ + DFGL+ +++
Sbjct: 124 CHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 45/218 (20%)
Query: 696 SYAELSKATSEFSSS---------NMIGQGRFGTVYKGIL---GDDEMVVAVKVINL--- 740
+Y + ++A +F+ +IG G FG V G L G ++ VA+K + +
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 741 -KQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA----LVFEYMENGSLE 795
KQ+ + F+ E + H N++ + EGV + +V E+MENG+L+
Sbjct: 85 EKQR---RDFLCEASIMGQFDHPNVVHL---------EGVVTRGKPVMIVIEFMENGALD 132
Query: 796 DWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVA 855
+L + + Q ++IQ + + +A+ + YL VH DL N+L++ ++V
Sbjct: 133 AFLRKHDGQ-----FTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVC 184
Query: 856 HVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
V DFGL++ + + + + T G K V + AP
Sbjct: 185 KVSDFGLSRVIEDDPEAVYTTT-----GGKIPVRWTAP 217
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG+ +++ + V + L++ A+K + E + ++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 69 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 117
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 118 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 161
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 26/179 (14%)
Query: 695 VSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSE 752
VS A + + + +G+G +G VYK I VA+K I L +++G + + E
Sbjct: 24 VSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIRE 83
Query: 753 CEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSND-QVEVRKLS 811
L+ ++HRN+I++ ++ L+FEY EN L+ ++ ++ D + V K
Sbjct: 84 VSLLKELQHRNIIELKSVIHHN-----HRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSF 137
Query: 812 LIQRMNIAIDVASAIEYLH-HHCQPPMVHGDLKPSNVLLDYD-----MVAHVGDFGLAK 864
L Q +N + + H C +H DLKP N+LL V +GDFGLA+
Sbjct: 138 LYQLIN-------GVNFCHSRRC----LHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 43/215 (20%)
Query: 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRH 761
+ S+F ++GQG FG V K D A+K I ++ S + +SE L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVXLLASLNH 61
Query: 762 -------------RNLIKIITICSSTDFEGVDFKALVF---EYMENGSLEDWLHQSN-DQ 804
RN +K T V K+ +F EY EN +L D +H N +Q
Sbjct: 62 QYVVRYYAAWLERRNFVKPXT--------AVKKKSTLFIQXEYCENRTLYDLIHSENLNQ 113
Query: 805 VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
L ++ + A+ Y+H ++H +LKP N+ +D +GDFGLAK
Sbjct: 114 QRDEYWRLFRQ------ILEALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
Query: 865 FLSNHHLDI----ASKTPSSSIGIK---GTVGYVA 892
+ + LDI + P SS + GT YVA
Sbjct: 165 NV-HRSLDILKLDSQNLPGSSDNLTSAIGTAXYVA 198
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 713 IGQGRFGTVYK----GILGDD-EMVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V GI D + V V V LK K VSE E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN----------DQVEVRKLSLI 813
+I ++ C+ +G + ++ EY G+L ++L ++V +++
Sbjct: 103 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 814 QRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
++ +A +EYL C +H DL NVL+ + V + DFGLA+ ++N +D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--ID 211
Query: 873 IASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
KT + + +K ++AP F +YTH
Sbjct: 212 XXKKTTNGRLPVK----WMAPEALFDRVYTH 238
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 26/203 (12%)
Query: 697 YAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSEC-EA 755
+A + ++ ++IG+G V + + AVK++ + + S + E EA
Sbjct: 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREA 145
Query: 756 LRNIRH--RNLI---KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKL 810
R H R + IIT+ S +E F LVF+ M G L D+L E L
Sbjct: 146 TRRETHILRQVAGHPHIITLIDS--YESSSFMFLVFDLMRKGELFDYL------TEKVAL 197
Query: 811 SLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHH 870
S + +I + A+ +LH + +VH DLKP N+LLD +M + DFG + H
Sbjct: 198 SEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSC-----H 249
Query: 871 LDIASKTPSSSIGIKGTVGYVAP 893
L+ K + GT GY+AP
Sbjct: 250 LEPGEKLRE----LCGTPGYLAP 268
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 26/191 (13%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDD----EMVVAVKVINLKQKGASKSFVSECE---ALR 757
+E ++G G FGTV+KG+ + ++ V +KVI + K +SF + + A+
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI--EDKSGRQSFQAVTDHMLAIG 70
Query: 758 NIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMN 817
++ H ++++++ +C + + LV +Y+ GSL D + Q + + L +N
Sbjct: 71 SLDHAHIVRLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQHRGALGPQLL-----LN 119
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL---SNHHLDIA 874
+ +A + YL H MVH +L NVLL V DFG+A L L
Sbjct: 120 WGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 176
Query: 875 SKTPSSSIGIK 885
+KTP + ++
Sbjct: 177 AKTPIKWMALE 187
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKG--ILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG I +++ + V + L++ A+K + E + ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 125
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFG AK L
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 34/208 (16%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDD----EMVVAVKVINLKQKGASKSFVSECE---ALR 757
+E ++G G FGTV+KG+ + ++ V +KVI + K +SF + + A+
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI--EDKSGRQSFQAVTDHMLAIG 88
Query: 758 NIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMN 817
++ H ++++++ +C + + LV +Y+ GSL D + Q + + L +N
Sbjct: 89 SLDHAHIVRLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQHRGALGPQLL-----LN 137
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL---SNHHLDIA 874
+ +A + YL H MVH +L NVLL V DFG+A L L
Sbjct: 138 WGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 194
Query: 875 SKTPSSSIGIKGTVGYVAPGKFFMLYTH 902
+KTP + ++ F YTH
Sbjct: 195 AKTPIKWMALESI--------HFGKYTH 214
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 713 IGQGRFGTVYK----GILGDD-EMVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V GI D + V V V LK K VSE E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN----------DQVEVRKLSLI 813
+I ++ C+ +G + ++ EY G+L ++L ++V +++
Sbjct: 103 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 814 QRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
++ +A +EYL C +H DL NVL+ + V + DFGLA+ ++N +D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--ID 211
Query: 873 IASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
KT + + +K ++AP F +YTH
Sbjct: 212 XXKKTTNGRLPVK----WMAPEALFDRVYTH 238
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEAL-RNIR 760
S+F +IG+G FG V +E+ AVKV+ K +K K +SE L +N++
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H L+ + F+ D V +Y+ G L L + +E R A
Sbjct: 98 HPFLVGL-----HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRA------RFYAA 146
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSS 880
++ASA+ YLH +V+ DLKP N+LLD + DFGL K H+ S+
Sbjct: 147 EIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--------ST 195
Query: 881 SIGIKGTVGYVAP 893
+ GT Y+AP
Sbjct: 196 TSTFCGTPEYLAP 208
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG+ +++ + V + L++ A+K + E + ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 125
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFG AK L
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 17/155 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V G + VA+K+I K+ S+ F+ E + + N+ H L+++ +C
Sbjct: 17 LGTGQFGVVKYGKW-RGQYDVAIKMI--KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ + F ++ EYM NG L ++L + + + ++L + + DV A+EYL
Sbjct: 74 TK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE- 122
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+H DL N L++ V V DFGL++++
Sbjct: 123 --SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 155
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 713 IGQGRFGTVYK----GILGDD-EMVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V GI D + V V V LK K VSE E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN----------DQVEVRKLSLI 813
+I ++ C+ +G + ++ EY G+L ++L ++V +++
Sbjct: 103 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 814 QRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
++ +A +EYL C +H DL NVL+ + V + DFGLA+ ++N +D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLARDINN--ID 211
Query: 873 IASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
KT + + +K ++AP F +YTH
Sbjct: 212 YYKKTTNGRLPVK----WMAPEALFDRVYTH 238
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKG--ILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG I +++ + V + L++ A+K + E + ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 79 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 127
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFG AK L
Sbjct: 128 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL 171
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++ G FGTVYKG+ +++ + V + L++ A+K + E + ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 130
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 12/190 (6%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDE---MVVAVKVINLKQKGAS--KSFVSECEALRNI 759
+F+ M+G+G FG+V + L ++ + VAVK++ +S + F+ E ++
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 760 RHRNLIKIITICSSTDFEG-VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
H ++ K++ + + +G + ++ +M++G L +L S L L +
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN---HHLDIAS 875
+D+A +EYL +H DL N +L DM V DFGL++ + + + AS
Sbjct: 143 MVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
Query: 876 KTPSSSIGIK 885
K P + ++
Sbjct: 200 KLPVKWLALE 209
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 713 IGQGRFGTVYK----GILGDD-EMVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V GI D + V V V LK K VSE E ++ I +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN----------DQVEVRKLSLI 813
+I ++ C+ +G + ++ EY G+L ++L ++V +++
Sbjct: 149 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 814 QRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
++ +A +EYL C +H DL NVL+ + V + DFGLA+ ++N +D
Sbjct: 204 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--ID 257
Query: 873 IASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
KT + + +K ++AP F +YTH
Sbjct: 258 YYKKTTNGRLPVK----WMAPEALFDRVYTH 284
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 713 IGQGRFGTVYK----GILGDD-EMVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V GI D + V V V LK K VSE E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN----------DQVEVRKLSLI 813
+I ++ C+ +G + ++ EY G+L ++L ++V +++
Sbjct: 103 IITLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 814 QRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
++ +A +EYL C +H DL NVL+ + V + DFGLA+ ++N +D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--ID 211
Query: 873 IASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
KT + + +K ++AP F +YTH
Sbjct: 212 YYKKTTNGRLPVK----WMAPEALFDRVYTH 238
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 31/185 (16%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI--RHRNLIKIITI 770
IG+GR+G V+ G ++ VAVKV ++ S+ E E + + RH N++ I
Sbjct: 45 IGKGRYGEVWMGKWRGEK--VAVKVFFTTEEA---SWFRETEIYQTVLMRHENILGFI-- 97
Query: 771 CSSTDFEGVDFKA---LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIE 827
+ D +G L+ +Y ENGSL D+L + L + +A S +
Sbjct: 98 --AADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-------LDAKSMLKLAYSSVSGLC 148
Query: 828 YLHHHC-----QPPMVHGDLKPSNVLLDYDMVAHVGDFGLA-KFLSN-HHLDIASKTPSS 880
+LH +P + H DLK N+L+ + + D GLA KF+S+ + +DI P++
Sbjct: 149 HLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIP---PNT 205
Query: 881 SIGIK 885
+G K
Sbjct: 206 RVGTK 210
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 713 IGQGRFGTVYKGILGDDE---MVVAVKVI-NLKQKGASKSFVSECEALRNIRHRNLIKII 768
IG+G+FG V++GI E M VA+K N + F+ E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 78 GVITENPV------WIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAY 126
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASK 876
L VH D+ NVL+ + +GDFGL++++ + ASK
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASK 171
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 713 IGQGRFGTVYKGILGDDE---MVVAVKVI-NLKQKGASKSFVSECEALRNIRHRNLIKII 768
IG+G+FG V++GI E M VA+K N + F+ E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 78 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 126
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASK 876
L VH D+ NVL+ + +GDFGL++++ + ASK
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 713 IGQGRFGTVYK----GILGDD-EMVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V GI D + V V V LK K VSE E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN----------DQVEVRKLSLI 813
+I ++ C+ +G + ++ EY G+L ++L ++V +++
Sbjct: 103 IIHLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 814 QRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
++ +A +EYL C +H DL NVL+ + V + DFGLA+ ++N +D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--ID 211
Query: 873 IASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
KT + + +K ++AP F +YTH
Sbjct: 212 YYKKTTNGRLPVK----WMAPEALFDRVYTH 238
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKG--ILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG I +++ + V + L++ A+K + E + ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 130
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFG AK L
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL 174
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKG--ILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG I +++ + V + L++ A+K + E + ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 123
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFG AK L
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL 167
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++G G FGTVYKG+ +++ + V + L++ A+K + E + ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 125
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFG AK L
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++ G FGTVYKG+ +++ + V + L++ A+K + E + ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 130
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQK---GASKSFVSECEALRNI 759
+EF ++ G FGTVYKG+ +++ + V + L++ A+K + E + ++
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ ++ +++ IC ++ + L+ + M G L D++ + D + + L +N
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 123
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +A + YL +VH DL NVL+ + DFGLAK L
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 686 SPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVK---VINLKQ 742
P + L P + Y L+ F IG+G+F VY+ D + VA+K + +L
Sbjct: 17 QPQKALRPDMGYNTLAN----FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD 72
Query: 743 KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN 802
A + E + L+ + H N+IK F + +V E + G L +
Sbjct: 73 AKARADCIKEIDLLKQLNHPNVIKYYA-----SFIEDNELNIVLELADAGDLSRMIKHFK 127
Query: 803 DQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862
Q + + + + + SA+E++H ++H D+KP+NV + V +GD GL
Sbjct: 128 KQKRLIPERTVWK--YFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGL 182
Query: 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGK 895
+F S SKT +++ + GT Y++P +
Sbjct: 183 GRFFS-------SKT-TAAHSLVGTPYYMSPER 207
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 28/190 (14%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI--RHRNLIKIITI 770
+G+GR+G V++G + VAVK+ + + + KS+ E E + RH N++ I
Sbjct: 45 VGKGRYGEVWRGSWQGEN--VAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIAS 99
Query: 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
++ L+ Y E GSL D+L ++ L + + I + +AS + +LH
Sbjct: 100 DMTSRHSSTQL-WLITHYHEMGSLYDYL-------QLTTLDTVSCLRIVLSIASGLAHLH 151
Query: 831 -----HHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF--LSNHHLDIASKTPSSSIG 883
+P + H DLK N+L+ + + D GLA S + LD+ +
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV---- 207
Query: 884 IKGTVGYVAP 893
GT Y+AP
Sbjct: 208 --GTKRYMAP 215
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 18/162 (11%)
Query: 713 IGQGRFGTVYKG-----ILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNIRHRNLIK 766
+GQG FG VY+G I G+ E VAVK +N + F++E ++ ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEV---RKLSLIQRM-NIAIDV 822
++ + S V V E M +G L+ +L + E R +Q M +A ++
Sbjct: 82 LLGVVSKGQPTLV-----VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 136
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
A + YL+ VH DL N ++ +D +GDFG+ +
Sbjct: 137 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 713 IGQGRFGTVYK----GILGDD-EMVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V GI D + V V V LK K VSE E ++ I +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN----------DQVEVRKLSLI 813
+I ++ C+ +G + ++ EY G+L ++L ++V +++
Sbjct: 90 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 814 QRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
++ +A +EYL C +H DL NVL+ + V + DFGLA+ ++N +D
Sbjct: 145 DLVSCTYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLARDINN--ID 198
Query: 873 IASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
KT + + +K ++AP F +YTH
Sbjct: 199 YYKKTTNGRLPVK----WMAPEALFDRVYTH 225
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 713 IGQGRFGTVYK----GILGDD-EMVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V GI D + V V V LK K VSE E ++ I +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN----------DQVEVRKLSLI 813
+I ++ C+ +G + ++ EY G+L ++L ++V +++
Sbjct: 92 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 814 QRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
++ +A +EYL C +H DL NVL+ + V + DFGLA+ ++N +D
Sbjct: 147 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--ID 200
Query: 873 IASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
KT + + +K ++AP F +YTH
Sbjct: 201 YYKKTTNGRLPVK----WMAPEALFDRVYTH 227
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 713 IGQGRFGTVYK----GILGDD-EMVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V GI D + V V V LK K VSE E ++ I +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN----------DQVEVRKLSLI 813
+I ++ C+ +G + ++ EY G+L ++L ++V +++
Sbjct: 95 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 814 QRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
++ +A +EYL C +H DL NVL+ + V + DFGLA+ ++N +D
Sbjct: 150 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--ID 203
Query: 873 IASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
KT + + +K ++AP F +YTH
Sbjct: 204 YYKKTTNGRLPVK----WMAPEALFDRVYTH 230
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 20/186 (10%)
Query: 691 LFPMVSYA--ELSKATSEFSSSNMIGQGRFGTVYKG-----ILGDDEMVVAVKVINLKQK 743
+FP Y E + + + +GQG FG VY+G I G+ E VAVK +N
Sbjct: 1 VFPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS 60
Query: 744 GASK-SFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN 802
+ F++E ++ ++++++ + S V V E M +G L+ +L
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV-----VMELMAHGDLKSYLRSLR 115
Query: 803 DQVE---VRKLSLIQRM-NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858
+ E R +Q M +A ++A + YL+ VH DL N ++ +D +G
Sbjct: 116 PEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIG 172
Query: 859 DFGLAK 864
DFG+ +
Sbjct: 173 DFGMTR 178
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVS----ECEALRNIRHRNL 764
+G+G FG V Y +VAVK + ++G S E E LR + H ++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL---KEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+K C +G LV EY+ GSL D+L + + L Q + A +
Sbjct: 73 VKYKGCCED---QGEKSVQLVMEYVPLGSLRDYLPR-------HCVGLAQLLLFAQQICE 122
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHH 870
+ YLH +H L NVLLD D + +GDFGLAK + H
Sbjct: 123 GMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH 165
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 713 IGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVS----ECEALRNIRHRNL 764
+G+G FG V Y +VAVK + ++G S E E LR + H ++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL---KEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+K C +G LV EY+ GSL D+L + + L Q + A +
Sbjct: 74 VKYKGCCED---QGEKSVQLVMEYVPLGSLRDYLPR-------HCVGLAQLLLFAQQICE 123
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHH 870
+ YLH +H L NVLLD D + +GDFGLAK + H
Sbjct: 124 GMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH 166
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 18/162 (11%)
Query: 713 IGQGRFGTVYKG-----ILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNIRHRNLIK 766
+GQG FG VY+G I G+ E VAVK +N + F++E ++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE---VRKLSLIQRM-NIAIDV 822
++ + S V V E M +G L+ +L + E R +Q M +A ++
Sbjct: 85 LLGVVSKGQPTLV-----VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
A + YL+ VH DL N ++ +D +GDFG+ +
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 713 IGQGRFGTVYKGILGDDE---MVVAVKVI-NLKQKGASKSFVSECEALRNIRHRNLIKII 768
IG+G+FG V++GI E + VA+K N + F+ E +R H +++K+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 106 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 154
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASK 876
L VH D+ NVL+ + +GDFGL++++ + ASK
Sbjct: 155 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 199
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 18/162 (11%)
Query: 713 IGQGRFGTVYKG-----ILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNIRHRNLIK 766
+GQG FG VY+G I G+ E VAVK +N + F++E ++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE---VRKLSLIQRM-NIAIDV 822
++ + S V V E M +G L+ +L + E R +Q M +A ++
Sbjct: 85 LLGVVSKGQPTLV-----VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
A + YL+ VH DL N ++ +D +GDFG+ +
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 18/162 (11%)
Query: 713 IGQGRFGTVYKG-----ILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNIRHRNLIK 766
+GQG FG VY+G I G+ E VAVK +N + F++E ++ ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE---VRKLSLIQRM-NIAIDV 822
++ + S V V E M +G L+ +L + E R +Q M +A ++
Sbjct: 84 LLGVVSKGQPTLV-----VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
A + YL+ VH DL N ++ +D +GDFG+ +
Sbjct: 139 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 18/192 (9%)
Query: 689 EKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDE---MVVAVKVI-NLKQKG 744
E + M S + IG+G+FG V++GI E M VA+K N
Sbjct: 374 EDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS 433
Query: 745 ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQ 804
+ F+ E +R H +++K+I + + ++ E G L +L Q
Sbjct: 434 VREKFLQEALTMRQFDHPHIVKLIGVITENPV------WIIMELCTLGELRSFL-----Q 482
Query: 805 VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
V L L + A +++A+ YL VH D+ NVL+ + +GDFGL++
Sbjct: 483 VRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539
Query: 865 FLSNHHLDIASK 876
++ + ASK
Sbjct: 540 YMEDSTYYKASK 551
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 699 ELSKATSEFSSSNMIGQGRFGTVY----KGILGDD-EMVVAVKVINLKQKGASK-SFVSE 752
E A + + S +GQG FG VY KG++ D+ E VA+K +N + F++E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 753 CEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKL-- 810
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 811 --SLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 85/212 (40%), Gaps = 44/212 (20%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+F +IG G FG V+K D ++ + + A + E +AL + H N++
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIV 68
Query: 766 KIITICSSTDF---------EGVDFKA---------------LVFEYMENGSLEDWLHQS 801
D+ E D+ + E+ + G+LE W+ +
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 802 NDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861
+ KL + + + + ++Y+H ++H DLKPSN+ L +GDFG
Sbjct: 129 RGE----KLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFG 181
Query: 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
L L N +T S KGT+ Y++P
Sbjct: 182 LVTSLKND----GKRTRS-----KGTLRYMSP 204
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 699 ELSKATSEFSSSNMIGQGRFGTVY----KGILGDD-EMVVAVKVINLKQKGASK-SFVSE 752
E A + + S +GQG FG VY KG++ D+ E VA+K +N + F++E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 753 CEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKL-- 810
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 811 --SLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 700 LSKATSEFSSSNMIGQGRFGTVYKGI-LGDDEMVVAVKVINLK--QKGASKSFVSECEAL 756
L +A ++ IG+G +G V+K L + VA+K + ++ ++G S + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 757 RNIR---HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLI 813
R++ H N++++ +C+ + + LVFE+++ L +L D+V +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL----DKVPEPGVPTE 120
Query: 814 QRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
++ + +++LH H +VH DLKP N+L+ + DFGLA+ S
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 18/162 (11%)
Query: 713 IGQGRFGTVYKG-----ILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNIRHRNLIK 766
+GQG FG VY+G I G+ E VAVK +N + F++E ++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE---VRKLSLIQRM-NIAIDV 822
++ + S V V E M +G L+ +L + E R +Q M +A ++
Sbjct: 85 LLGVVSKGQPTLV-----VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
A + YL+ VH DL N ++ +D +GDFG+ +
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 713 IGQGRFGTVYKGILGDDE---MVVAVKVI-NLKQKGASKSFVSECEALRNIRHRNLIKII 768
IG+G+FG V++GI E + VA+K N + F+ E +R H +++K+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 83 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 131
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASK 876
L VH D+ NVL+ + +GDFGL++++ + ASK
Sbjct: 132 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 176
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 713 IGQGRFGTVYK----GILGDD-EMVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V GI D + V V V LK + VSE E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN----------DQVEVRKLSLI 813
+I ++ C+ +G + ++ EY G+L ++L ++V +++
Sbjct: 103 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 814 QRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
++ +A +EYL C +H DL NVL+ + V + DFGLA+ ++N +D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--ID 211
Query: 873 IASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
KT + + +K ++AP F +YTH
Sbjct: 212 YYKKTTNGRLPVK----WMAPEALFDRVYTH 238
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 713 IGQGRFGTVYKGILGDDE---MVVAVKVI-NLKQKGASKSFVSECEALRNIRHRNLIKII 768
IG+G+FG V++GI E + VA+K N + F+ E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 78 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 126
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASK 876
L VH D+ NVL+ + +GDFGL++++ + ASK
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 713 IGQGRFGTVYKGILGDDE---MVVAVKVI-NLKQKGASKSFVSECEALRNIRHRNLIKII 768
IG+G+FG V++GI E + VA+K N + F+ E +R H +++K+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 81 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 129
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASK 876
L VH D+ NVL+ + +GDFGL++++ + ASK
Sbjct: 130 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 174
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 32/224 (14%)
Query: 699 ELSKATSEFSSSNMIGQGRFGTVY----KGILGDD-EMVVAVKVINLKQKGASK-SFVSE 752
E A + + S +GQG FG VY KG++ D+ E VA+K +N + F++E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 753 CEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE----VR 808
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR---- 180
Query: 869 HHLDIASKTPSSSIGIKG--TVGYVAPGKF----FMLYTHIPSF 906
DI +T G KG V +++P F Y+ + SF
Sbjct: 181 ---DI-XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 220
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 28/190 (14%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI--RHRNLIKIITI 770
+G+GR+G V++G + VAVK+ + + + KS+ E E + RH N++ I
Sbjct: 16 VGKGRYGEVWRGSWQGEN--VAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIAS 70
Query: 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
++ L+ Y E GSL D+L ++ L + + I + +AS + +LH
Sbjct: 71 DMTSRHSSTQL-WLITHYHEMGSLYDYL-------QLTTLDTVSCLRIVLSIASGLAHLH 122
Query: 831 -----HHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF--LSNHHLDIASKTPSSSIG 883
+P + H DLK N+L+ + + D GLA S + LD+ +
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV---- 178
Query: 884 IKGTVGYVAP 893
GT Y+AP
Sbjct: 179 --GTKRYMAP 186
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 18/179 (10%)
Query: 684 DTSPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
D +EKL +VS + K + F IGQG GTVY + VA++ +NL+Q+
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 58
Query: 744 GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSND 803
+ ++E +R ++ N++ + + D +V EY+ GSL D + ++
Sbjct: 59 PKKELIINEILVMRENKNPNIVNYL-----DSYLVGDELWVVMEYLAGGSLTDVVTETC- 112
Query: 804 QVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862
++ +++ + R + A+E+LH + ++H D+K N+LL D + DFG
Sbjct: 113 -MDEGQIAAVCR-----ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGF 162
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 18/179 (10%)
Query: 684 DTSPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
D +EKL +VS + K + F IGQG GTVY + VA++ +NL+Q+
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 58
Query: 744 GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSND 803
+ ++E +R ++ N++ + + D +V EY+ GSL D + ++
Sbjct: 59 PKKELIINEILVMRENKNPNIVNYL-----DSYLVGDELWVVMEYLAGGSLTDVVTETC- 112
Query: 804 QVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862
++ +++ + R + A+E+LH + ++H D+K N+LL D + DFG
Sbjct: 113 -MDEGQIAAVCR-----ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGF 162
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 18/179 (10%)
Query: 684 DTSPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
D +EKL +VS + K + F IGQG GTVY + VA++ +NL+Q+
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 58
Query: 744 GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSND 803
+ ++E +R ++ N++ + + D +V EY+ GSL D + ++
Sbjct: 59 PKKELIINEILVMRENKNPNIVNYL-----DSYLVGDELWVVMEYLAGGSLTDVVTETC- 112
Query: 804 QVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862
++ +++ + R + A+E+LH + ++H D+K N+LL D + DFG
Sbjct: 113 -MDEGQIAAVCR-----ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGF 162
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 28/190 (14%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI--RHRNLIKIITI 770
+G+GR+G V++G + VAVK+ + + + KS+ E E + RH N++ I
Sbjct: 16 VGKGRYGEVWRGSWQGEN--VAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIAS 70
Query: 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
++ L+ Y E GSL D+L ++ L + + I + +AS + +LH
Sbjct: 71 DMTSRHSSTQL-WLITHYHEMGSLYDYL-------QLTTLDTVSCLRIVLSIASGLAHLH 122
Query: 831 -----HHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF--LSNHHLDIASKTPSSSIG 883
+P + H DLK N+L+ + + D GLA S + LD+ +
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV---- 178
Query: 884 IKGTVGYVAP 893
GT Y+AP
Sbjct: 179 --GTKRYMAP 186
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 700 LSKATSEFSSSNMIGQGRFGTVYKGI-LGDDEMVVAVKVINLK--QKGASKSFVSECEAL 756
L +A ++ IG+G +G V+K L + VA+K + ++ ++G S + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 757 RNIR---HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLI 813
R++ H N++++ +C+ + + LVFE+++ L +L D+V +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL----DKVPEPGVPTE 120
Query: 814 QRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
++ + +++LH H +VH DLKP N+L+ + DFGLA+ S
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 18/192 (9%)
Query: 689 EKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDE---MVVAVKVI-NLKQKG 744
E + M S + IG+G+FG V++GI E M VA+K N
Sbjct: 374 EDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS 433
Query: 745 ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQ 804
+ F+ E +R H +++K+I + + ++ E G L +L Q
Sbjct: 434 VREKFLQEALTMRQFDHPHIVKLIGVITENPV------WIIMELCTLGELRSFL-----Q 482
Query: 805 VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
V L L + A +++A+ YL VH D+ NVL+ +GDFGL++
Sbjct: 483 VRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSR 539
Query: 865 FLSNHHLDIASK 876
++ + ASK
Sbjct: 540 YMEDSTYYKASK 551
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 700 LSKATSEFSSSNMIGQGRFGTVYKGI-LGDDEMVVAVKVINLK--QKGASKSFVSECEAL 756
L +A ++ IG+G +G V+K L + VA+K + ++ ++G S + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 757 RNIR---HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLI 813
R++ H N++++ +C+ + + LVFE+++ L +L D+V +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL----DKVPEPGVPTE 120
Query: 814 QRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
++ + +++LH H +VH DLKP N+L+ + DFGLA+ S
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 699 ELSKATSEFSSSNMIGQGRFGTVY----KGILGDD-EMVVAVKVINLKQKGASK-SFVSE 752
E A + + S +GQG FG VY KG++ D+ E VA+K +N + F++E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 753 CEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE----VR 808
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 713 IGQGRFGTVYKGILGDDE---MVVAVKVI-NLKQKGASKSFVSECEALRNIRHRNLIKII 768
IG+G+FG V++GI E + VA+K N + F+ E +R H +++K+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 75 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 123
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASK 876
L VH D+ NVL+ + +GDFGL++++ + ASK
Sbjct: 124 LE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 168
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 713 IGQGRFGTVYKGILGDDE---MVVAVKVI-NLKQKGASKSFVSECEALRNIRHRNLIKII 768
IG+G+FG V++GI E + VA+K N + F+ E +R H +++K+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 80 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 128
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASK 876
L VH D+ NVL+ + +GDFGL++++ + ASK
Sbjct: 129 LE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 173
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 699 ELSKATSEFSSSNMIGQGRFGTVY----KGILGDD-EMVVAVKVINLKQKGASK-SFVSE 752
E A + + S +GQG FG VY KG++ D+ E VA+K +N + F++E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 753 CEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE----VR 808
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 18/168 (10%)
Query: 713 IGQGRFGTVYKGILGDDE---MVVAVKVI-NLKQKGASKSFVSECEALRNIRHRNLIKII 768
IG+G+FG V++GI E M VA+K N + F+ E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 78 GVITENPV------WIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAY 126
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASK 876
L VH D+ NVL+ +GDFGL++++ + ASK
Sbjct: 127 LE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 699 ELSKATSEFSSSNMIGQGRFGTVY----KGILGDD-EMVVAVKVINLKQKGASK-SFVSE 752
E A + + S +GQG FG VY KG++ D+ E VA+K +N + F++E
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 753 CEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE----VR 808
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 699 ELSKATSEFSSSNMIGQGRFGTVY----KGILGDD-EMVVAVKVINLKQKGASK-SFVSE 752
E A + + S +GQG FG VY KG++ D+ E VA+K +N + F++E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 753 CEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE----VR 808
++ ++++++ + S ++ E M G L+ +L ++E +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQG-----QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 33/177 (18%)
Query: 713 IGQGRFGTVY--KGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNLIKII 768
IG+G F V + IL E VAVK+I+ Q +S + E ++ + H N++K+
Sbjct: 15 IGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 72
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLED------WLHQSNDQVEVRKLSLIQRMNIAIDV 822
+ + E + LV EY G + D W+ + + + R+ +
Sbjct: 73 EVIET---EKTLY--LVMEYASGGEVFDYLVAHGWMKEKEARAKFRQ------------I 115
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA-KFLSNHHLDIASKTP 878
SA++Y H Q +VH DLK N+LLD DM + DFG + +F + LD +P
Sbjct: 116 VSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 169
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 16/158 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V+ G ++ VAVK LK S ++F+ E ++ ++H L+++ +
Sbjct: 21 LGAGQFGEVWMGYY-NNSTKVAVKT--LKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
+ + ++ EYM GSL D+L E K+ L + ++ + +A + Y+
Sbjct: 78 TREEP-----IYIITEYMAKGSLLDFLKSD----EGGKVLLPKLIDFSAQIAEGMAYIE- 127
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ +H DL+ +NVL+ ++ + DFGLA+ + ++
Sbjct: 128 --RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 163
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 699 ELSKATSEFSSSNMIGQGRFGTVY----KGILGDD-EMVVAVKVINLKQKGASK-SFVSE 752
E A + + S +GQG FG VY KG++ D+ E VA+K +N + F++E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 753 CEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE----VR 808
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 713 IGQGRFGTVYK----GILGDD-EMVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V GI D + V V V LK K VSE E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN----------DQVEVRKLSLI 813
+I ++ C+ +G + ++ EY G+L ++L ++V +++
Sbjct: 103 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 814 QRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
++ +A +EYL C +H DL NVL+ + V + DFGLA+ ++N +D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--ID 211
Query: 873 IASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
T + + +K ++AP F +YTH
Sbjct: 212 YYKNTTNGRLPVK----WMAPEALFDRVYTH 238
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 696 SYAELSK---ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSF 749
+ AE+ K +F +G+G+FG VY ++ ++A+KV+ L+++G
Sbjct: 2 ALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL 61
Query: 750 VSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRK 809
E E ++RH N++++ F L+ E+ G L L + E R
Sbjct: 62 RREIEIQSHLRHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS 116
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861
+ ++ ++A A+ Y H + ++H D+KP N+L+ Y + DFG
Sbjct: 117 ATFME------ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 696 SYAELSK---ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSF 749
+ AE+ K +F +G+G+FG VY ++ ++A+KV+ L+++G
Sbjct: 3 ALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL 62
Query: 750 VSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRK 809
E E ++RH N++++ F L+ E+ G L L + E R
Sbjct: 63 RREIEIQSHLRHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS 117
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861
+ ++ ++A A+ Y H + ++H D+KP N+L+ Y + DFG
Sbjct: 118 ATFME------ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 699 ELSKATSEFSSSNMIGQGRFGTVY----KGILGDD-EMVVAVKVINLKQKGASK-SFVSE 752
E A + + S +GQG FG VY KG++ D+ E VA+K +N + F++E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 753 CEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE----VR 808
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 30/187 (16%)
Query: 713 IGQGRFGTVYKGILGDDEMV---VAVKVINL---KQKGASKSFVSECEALRNIRHRNLIK 766
+G G TVY L +D ++ VA+K I + +++ K F E + H+N++
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+I + E D LV EY+E +L +++ LS+ +N + I
Sbjct: 76 MIDVD-----EEDDCYYLVMEYIEGPTLSEYIESHG------PLSVDTAINFTNQILDGI 124
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKG 886
++ H +VH D+KP N+L+D + + DFG+AK LS L + + + G
Sbjct: 125 KHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL-------TQTNHVLG 174
Query: 887 TVGYVAP 893
TV Y +P
Sbjct: 175 TVQYFSP 181
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 19/163 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDE-MVVAVKVINL--KQKGASKSFVSECEALRNIRH 761
++ +G+G +G VYK D + +VA+K I L + +G + + E L+ + H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKA--KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 762 RNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821
N++ +I + S LVFE+ME L+ L ++ + +Q I I
Sbjct: 79 PNIVSLIDVIHSERC-----LTLVFEFMEK-DLKKVLDENK--------TGLQDSQIKIY 124
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H Q ++H DLKP N+L++ D + DFGLA+
Sbjct: 125 LYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 30/212 (14%)
Query: 684 DTSPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
D +EKL +VS + K + F IGQG GTVY + VA++ +NL+Q+
Sbjct: 3 DEEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 59
Query: 744 GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSND 803
+ ++E +R ++ N++ + + D +V EY+ GSL D + ++
Sbjct: 60 PKKELIINEILVMRENKNPNIVNYL-----DSYLVGDELWVVMEYLAGGSLTDVVTETC- 113
Query: 804 QVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
++ +++ + R + A+E+LH + ++H D+K N+LL D + DFG
Sbjct: 114 -MDEGQIAAVCR-----ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 164
Query: 864 KFLSNHHLDIASKTPSSSI--GIKGTVGYVAP 893
A TP S + GT ++AP
Sbjct: 165 ----------AQITPEQSKRSXMVGTPYWMAP 186
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 19/163 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDE-MVVAVKVINL--KQKGASKSFVSECEALRNIRH 761
++ +G+G +G VYK D + +VA+K I L + +G + + E L+ + H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKA--KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 762 RNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821
N++ +I + S LVFE+ME L+ L ++ + +Q I I
Sbjct: 79 PNIVSLIDVIHSERC-----LTLVFEFMEK-DLKKVLDENK--------TGLQDSQIKIY 124
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H Q ++H DLKP N+L++ D + DFGLA+
Sbjct: 125 LYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 699 ELSKATSEFSSSNMIGQGRFGTVY----KGILGDD-EMVVAVKVINLKQKGASK-SFVSE 752
E A + + S +GQG FG VY KG++ D+ E VA+K +N + F++E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 753 CEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKL-- 810
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 811 --SLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
SL + + +A ++A + YL+ + VH DL N + D +GDFG+ +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 713 IGQGRFGTVYK----GILGDD-EMVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V GI D + V V V LK K VSE E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN----------DQVEVRKLSLI 813
+I ++ C+ +G + ++ Y G+L ++L ++V +++
Sbjct: 103 IINLLGACTQ---DGPLY--VIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 814 QRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
++ +A +EYL C +H DL NVL+ + V + DFGLA+ ++N +D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--ID 211
Query: 873 IASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
KT + + +K ++AP F +YTH
Sbjct: 212 YYKKTTNGRLPVK----WMAPEALFDRVYTH 238
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 713 IGQGRFGTVY--KGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNLIKII 768
IG+G F V + IL E VAVK+I+ Q +S + E ++ + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + E + LV EY G + D+L E + ++ + SA++Y
Sbjct: 80 EVIET---EKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------IVSAVQY 128
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA-KFLSNHHLDIASKTP 878
H Q +VH DLK N+LLD DM + DFG + +F + LD +P
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 176
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 713 IGQGRFGTVY--KGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNLIKII 768
IG+G F V + IL E VAVK+I+ Q +S + E ++ + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + E + LV EY G + D+L E + ++ + SA++Y
Sbjct: 80 EVIET---EKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------IVSAVQY 128
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA-KFLSNHHLDIASKTP 878
H Q +VH DLK N+LLD DM + DFG + +F + LD +P
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 176
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 696 SYAELSK---ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSF 749
+ AE+ K +F +G+G+FG VY ++ ++A+KV+ L+++G
Sbjct: 2 ALAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL 61
Query: 750 VSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRK 809
E E ++RH N++++ F L+ E+ G L L + E R
Sbjct: 62 RREIEIQSHLRHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS 116
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861
+ ++ ++A A+ Y H + ++H D+KP N+L+ Y + DFG
Sbjct: 117 ATFME------ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIIT 769
+ +G+G + TVYKG + +VA+K I L+ ++GA + + E L++++H N++ +
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 770 ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYL 829
I + LVFEY++ L+ +L + + + + L + + Y
Sbjct: 68 IIHTEKS-----LTLVFEYLDK-DLKQYLDDCGNIINMHNVKLF-----LFQLLRGLAYC 116
Query: 830 HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
H + ++H DLKP N+L++ + DFGLA+
Sbjct: 117 H---RQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+G G+FG V+ + VAVK + ++F++E ++ ++H L+K+ + +
Sbjct: 196 LGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
++ E+M GSL D+L E K L + ++ + +A + ++
Sbjct: 254 KEPI------YIITEFMAKGSLLDFLKSD----EGSKQPLPKLIDFSAQIAEGMAFIE-- 301
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
Q +H DL+ +N+L+ +V + DFGLA+ + ++ ++ G K + + A
Sbjct: 302 -QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-------TAREGAKFPIKWTA 353
Query: 893 P 893
P
Sbjct: 354 P 354
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 93/196 (47%), Gaps = 22/196 (11%)
Query: 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI--NLKQKGASKSFVSECEALRNI 759
++ ++ + ++G+G +G V K D +VA+K + K K + E + L+ +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDW-LHQSNDQVEVRKLSLIQRMNI 818
RH NL+ ++ +C LVFE++++ L+D L + +V + L Q +N
Sbjct: 82 RHENLVNLLEVCKKKKRW-----YLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIIN- 135
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN----HHLDIA 874
I + H H ++H D+KP N+L+ V + DFG A+ L+ + ++A
Sbjct: 136 ------GIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA 186
Query: 875 SKTPSSSIGIKGTVGY 890
++ + + G V Y
Sbjct: 187 TRWYRAPELLVGDVKY 202
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 24/197 (12%)
Query: 700 LSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEAL 756
+ + +F N++G+G F VY+ + VA+K+I+ K + G + +E +
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 757 RNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRM 816
++H +++++ FE ++ LV E NG + +L + V+ S +
Sbjct: 66 CQLKHPSILELYNY-----FEDSNYVYLVLEMCHNGEMNRYL-----KNRVKPFSENEAR 115
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASK 876
+ + + + YLH H ++H DL SN+LL +M + DFGLA L H
Sbjct: 116 HFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH------ 166
Query: 877 TPSSSIGIKGTVGYVAP 893
+ GT Y++P
Sbjct: 167 --EKHYTLCGTPNYISP 181
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 102/257 (39%), Gaps = 73/257 (28%)
Query: 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG-ASKSFVSECEALRNI 759
S+ ++F +G+G FG V++ D+ A+K I L + A + + E +AL +
Sbjct: 2 SRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL 61
Query: 760 RHRNLIKIITIC-------------------SSTDFE----------GVDFKAL------ 784
H +++ STD+ V + +
Sbjct: 62 EHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTK 121
Query: 785 ------------VFEYME-----NGSLEDWLHQSNDQVEVRKLSLIQR-----MNIAIDV 822
V+ Y++ +L+DW++ R+ SL R ++I I +
Sbjct: 122 NTVGQLQPSSPKVYLYIQMQLCRKENLKDWMN--------RRCSLEDREHGVCLHIFIQI 173
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP---- 878
A A+E+LH ++H DLKPSN+ D V VGDFGL + + TP
Sbjct: 174 AEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 230
Query: 879 SSSIGIKGTVGYVAPGK 895
++ G GT Y++P +
Sbjct: 231 ATHXGQVGTKLYMSPEQ 247
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 709 SSNMIGQGRFGTVYKGILGD---DEMVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNL 764
S +IG+G FG VY G D + + A+K ++ + + ++F+ E +R + H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+ +I I EG+ ++ YM +G L ++ V+ L ++ + VA
Sbjct: 85 LALIGIMLPP--EGL--PHVLLPYMCHGDLLQFIRSPQRNPTVKDL-----ISFGLQVAR 135
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+EYL + VH DL N +LD V DFGLA+
Sbjct: 136 GMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 20/186 (10%)
Query: 691 LFPMVSYA--ELSKATSEFSSSNMIGQGRFGTVYKG-----ILGDDEMVVAVKVINLKQK 743
+FP Y E + + + +GQG FG VY+G I G+ E VAVK +N
Sbjct: 2 VFPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS 61
Query: 744 GASK-SFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN 802
+ F++E ++ ++++++ + S V V E M +G L+ +L
Sbjct: 62 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV-----VMELMAHGDLKSYLRSLR 116
Query: 803 DQVE---VRKLSLIQRM-NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858
+ E R +Q M +A ++A + YL+ VH +L N ++ +D +G
Sbjct: 117 PEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIG 173
Query: 859 DFGLAK 864
DFG+ +
Sbjct: 174 DFGMTR 179
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 31/166 (18%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR----------HR 762
+G+G +G V+K I VVAVK I +F + +A R R H
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKI-------FDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
N++ ++ + + + V LVF+YME LH + L + + + +
Sbjct: 70 NIVNLLNVLRADNDRDV---YLVFDYMETD-----LHAV---IRANILEPVHKQYVVYQL 118
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
I+YLH ++H D+KPSN+LL+ + V DFGL++ N
Sbjct: 119 IKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVN 161
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ L+D++ S + L LI+ +
Sbjct: 61 HPNIVKLLDVIHTENK-----LYLVFEFLHQ-DLKDFMDAS--ALTGIPLPLIK--SYLF 110
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 713 IGQGRFGTVYK----GILGDD-EMVVAVKVINLKQKGASKSF---VSECEALRNI-RHRN 763
+G+G FG V GI D + V V V LK K VSE E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN----------DQVEVRKLSLI 813
+I ++ C+ +G + ++ Y G+L ++L ++V +++
Sbjct: 103 IINLLGACTQ---DGPLY--VIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 814 QRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
++ +A +EYL C +H DL NVL+ + V + DFGLA+ ++N +D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--ID 211
Query: 873 IASKTPSSSIGIKGTVGYVAPGKFF-MLYTH 902
KT + + +K ++AP F +YTH
Sbjct: 212 YYKKTTNGRLPVK----WMAPEALFDRVYTH 238
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 55.8 bits (133), Expect = 9e-08, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 83/158 (52%), Gaps = 16/158 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-KSFVSECEALRNIRHRNLIKIITIC 771
+G G+FG V+ G ++ VAVK LK S ++F+ E ++ ++H L+++ +
Sbjct: 20 LGAGQFGEVWMGYY-NNSTKVAVKT--LKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
T E + ++ E+M GSL D+L E K+ L + ++ + +A + Y+
Sbjct: 77 --TKEEPI---YIITEFMAKGSLLDFLKSD----EGGKVLLPKLIDFSAQIAEGMAYIE- 126
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ +H DL+ +NVL+ ++ + DFGLA+ + ++
Sbjct: 127 --RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 162
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 713 IGQGRFGTVY--KGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNLIKII 768
IG+G F V + IL E VAVK+I+ Q +S + E ++ + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + E + LV EY G + D+L E + ++ + SA++Y
Sbjct: 80 EVIET---EKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------IVSAVQY 128
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA-KFLSNHHLDIASKTP 878
H Q +VH DLK N+LLD DM + DFG + +F + LD P
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAP 176
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 55.8 bits (133), Expect = 9e-08, Method: Composition-based stats.
Identities = 47/204 (23%), Positives = 84/204 (41%), Gaps = 41/204 (20%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+F +IG G FG V+K D +K + + A + E +AL + H N++
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 766 KIITICSSTDFEGVDFKA----------------LVFEYMENGSLEDWLHQSNDQVEVRK 809
+ ++G D+ + E+ + G+LE W+ + + K
Sbjct: 68 HY-----NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE----K 118
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
L + + + + ++Y+H +++ DLKPSN+ L +GDFGL L N
Sbjct: 119 LDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 175
Query: 870 HLDIASKTPSSSIGIKGTVGYVAP 893
S KGT+ Y++P
Sbjct: 176 GKRXRS---------KGTLRYMSP 190
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 20/186 (10%)
Query: 691 LFPMVSYA--ELSKATSEFSSSNMIGQGRFGTVYKG-----ILGDDEMVVAVKVINLKQK 743
+FP Y E + + + +GQG FG VY+G I G+ E VAVK +N
Sbjct: 1 VFPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS 60
Query: 744 GASK-SFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN 802
+ F++E ++ ++++++ + S V V E M +G L+ +L
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV-----VMELMAHGDLKSYLRSLR 115
Query: 803 DQVE---VRKLSLIQRM-NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858
+ E R +Q M +A ++A + YL+ VH +L N ++ +D +G
Sbjct: 116 PEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIG 172
Query: 859 DFGLAK 864
DFG+ +
Sbjct: 173 DFGMTR 178
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 20/177 (11%)
Query: 699 ELSKATSEFSSSNMIGQGRFGTVY----KGILGDD-EMVVAVKVINLKQKGASK-SFVSE 752
E A + + S +GQG FG VY KG++ D+ E VA+K +N + F++E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 753 CEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQ-----SNDQVEV 807
++ ++++++ + S V + E M G L+ +L +N+ V +
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPAMANNPV-L 122
Query: 808 RKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+G G+FG V+ + VAVK + + ++F++E ++ ++H L+K+ + +
Sbjct: 23 LGAGQFGEVWMATY-NKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
++ E+M GSL D+L E K L + ++ + +A + ++
Sbjct: 81 KEPI------YIITEFMAKGSLLDFLKSD----EGSKQPLPKLIDFSAQIAEGMAFIE-- 128
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
Q +H DL+ +N+L+ +V + DFGLA+ + ++
Sbjct: 129 -QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 164
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 21/176 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNL 764
S + +G G G V+ + D + VA+K I L + K + E + +R + H N+
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNI 70
Query: 765 IKIITICSSTDFEGVDFKA---------LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQR 815
+K+ I + + D +V EYME L + L Q E +L + Q
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHARLFMYQL 129
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD-YDMVAHVGDFGLAKFLSNHH 870
+ ++Y+H ++H DLKP+N+ ++ D+V +GDFGLA+ + H+
Sbjct: 130 LR-------GLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHY 175
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 713 IGQGRFGTVY--KGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNLIKII 768
IG+G F V + IL E VAV++I+ Q +S + E ++ + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + E + LV EY G + D+L E + ++ + SA++Y
Sbjct: 80 EVIET---EKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------IVSAVQY 128
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA-KFLSNHHLDIASKTP 878
H Q +VH DLK N+LLD DM + DFG + +F + LD +P
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 176
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 37/199 (18%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA---------SKSFVSECEALR 757
+ ++G+G V + I AVK+I++ G+ ++ + E + LR
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 758 NIR-HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQ--SNDQVEVRKLSLIQ 814
+ H N+I++ +E F LVF+ M+ G L D+L + + + E RK+
Sbjct: 79 KVSGHPNIIQL-----KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI---- 129
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
M ++V A+ L+ +VH DLKP N+LLD DM + DFG + LD
Sbjct: 130 -MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS-----CQLDPG 177
Query: 875 SKTPSSSIGIKGTVGYVAP 893
K S + GT Y+AP
Sbjct: 178 EKLRS----VCGTPSYLAP 192
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 32/195 (16%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+FS +IG+G FG VY D + A+K ++ K+ + + E L + R ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-----MKQGETL-ALNERIML 243
Query: 766 KIIT-------ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+++ +C S F D + + + M G L H S V S
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGV----FSEADMRFY 297
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A ++ +E++H+ +V+ DLKP+N+LLD + D GLA D + K P
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP 347
Query: 879 SSSIGIKGTVGYVAP 893
+S+ GT GY+AP
Sbjct: 348 HASV---GTHGYMAP 359
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 32/195 (16%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+FS +IG+G FG VY D + A+K ++ K + + + E L + R ++
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-----RIKMKQGETL-ALNERIML 242
Query: 766 KIIT-------ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+++ +C S F D + + + M G L H S V S
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGV----FSEADMRFY 296
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A ++ +E++H+ +V+ DLKP+N+LLD + D GLA D + K P
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP 346
Query: 879 SSSIGIKGTVGYVAP 893
+S+ GT GY+AP
Sbjct: 347 HASV---GTHGYMAP 358
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 32/195 (16%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+FS +IG+G FG VY D + A+K ++ K+ + + E L + R ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-----MKQGETL-ALNERIML 243
Query: 766 KIIT-------ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+++ +C S F D + + + M G L H S V S
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGV----FSEADMRFY 297
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A ++ +E++H+ +V+ DLKP+N+LLD + D GLA D + K P
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP 347
Query: 879 SSSIGIKGTVGYVAP 893
+S+ GT GY+AP
Sbjct: 348 HASV---GTHGYMAP 359
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 32/195 (16%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+FS +IG+G FG VY D + A+K ++ K+ + + E L + R ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-----MKQGETL-ALNERIML 243
Query: 766 KIIT-------ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+++ +C S F D + + + M G L H S V S
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGV----FSEADMRFY 297
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A ++ +E++H+ +V+ DLKP+N+LLD + D GLA D + K P
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP 347
Query: 879 SSSIGIKGTVGYVAP 893
+S+ GT GY+AP
Sbjct: 348 HASV---GTHGYMAP 359
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ + L+D++ S + L LI+ +
Sbjct: 63 HPNIVKLLDVIHTENK-----LYLVFEFL-SMDLKDFMDAS--ALTGIPLPLIK--SYLF 112
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ + L+D++ S + L LI+ +
Sbjct: 64 HPNIVKLLDVIHTENK-----LYLVFEFL-SMDLKDFMDAS--ALTGIPLPLIK--SYLF 113
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G + L + + E R + I
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT----- 120
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 121 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 165
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 166 SRRXXLXGTLDYLPP 180
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/186 (30%), Positives = 86/186 (46%), Gaps = 29/186 (15%)
Query: 685 TSPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN---LK 741
+S E L+ ++AE ++ M+G+G FG V K + AVKVIN K
Sbjct: 8 SSGRENLYFQGTFAE------RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK 61
Query: 742 QKGASKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
K S + + E E L+ + H N++K+ I S+ F +V E G L D
Sbjct: 62 NKDTS-TILREVELLKKLDHPNIMKLFEILEDSSSF------YIVGELYTGGELFD---- 110
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY---DMVAHV 857
+ ++ ++ S I V S I Y+H H +VH DLKP N+LL+ D +
Sbjct: 111 --EIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKI 165
Query: 858 GDFGLA 863
DFGL+
Sbjct: 166 IDFGLS 171
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/186 (30%), Positives = 86/186 (46%), Gaps = 29/186 (15%)
Query: 685 TSPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN---LK 741
+S E L+ ++AE ++ M+G+G FG V K + AVKVIN K
Sbjct: 8 SSGRENLYFQGTFAE------RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK 61
Query: 742 QKGASKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
K S + + E E L+ + H N++K+ I S+ F +V E G L D
Sbjct: 62 NKDTS-TILREVELLKKLDHPNIMKLFEILEDSSSF------YIVGELYTGGELFD---- 110
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY---DMVAHV 857
+ ++ ++ S I V S I Y+H H +VH DLKP N+LL+ D +
Sbjct: 111 --EIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKI 165
Query: 858 GDFGLA 863
DFGL+
Sbjct: 166 IDFGLS 171
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 21/187 (11%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIK---- 766
IG G +G K D ++ K ++ + + VSE LR ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
II ++T + +V EY E G L + + + + + R+ + +A
Sbjct: 74 IIDRTNTTLY-------IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKG 886
+ ++H DLKP+NV LD +GDFGLA+ L NH D A + G
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDEDFAKE-------FVG 178
Query: 887 TVGYVAP 893
T Y++P
Sbjct: 179 TPYYMSP 185
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 20/177 (11%)
Query: 699 ELSKATSEFSSSNMIGQGRFGTVY----KGILGDD-EMVVAVKVINLKQKGASK-SFVSE 752
E A + + S +GQG FG VY KG++ D+ E VA+K +N + F++E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 753 CEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLH-----QSNDQVEV 807
++ ++++++ + S V + E M G L+ +L +N+ V +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPAMANNPV-L 132
Query: 808 RKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ E++KLS A
Sbjct: 92 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 137
Query: 820 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASK 876
++A+A+ Y H ++H D+KP N+LL + DFG +
Sbjct: 138 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGW-----------SVH 183
Query: 877 TPSS-SIGIKGTVGYVAP 893
PSS + GT+ Y+ P
Sbjct: 184 APSSRRTTLCGTLDYLPP 201
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 21/168 (12%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNL 764
S+ ++G+G FG K + V+ +K + + ++F+ E + +R + H N+
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV 69
Query: 765 IKIITICSSTDFEGVDFKA----LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
+K I GV +K + EY++ G+L + + Q QR++ A
Sbjct: 70 LKFI---------GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ-----YPWSQRVSFAK 115
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
D+AS + YLH ++H DL N L+ + V DFGLA+ + +
Sbjct: 116 DIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 116
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 117 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SCHAPS 161
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 162 SRRTTLSGTLDYLPP 176
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 713 IGQGRFGTVY--KGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNLIKII 768
IG+G F V + IL E VAV++I+ Q +S + E ++ + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + E + LV EY G + D+L E + ++ + SA++Y
Sbjct: 80 EVIET---EKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------IVSAVQY 128
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA-KFLSNHHLDIASKTP 878
H Q +VH DLK N+LLD DM + DFG + +F + LD +P
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSP 176
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/191 (29%), Positives = 85/191 (44%), Gaps = 35/191 (18%)
Query: 711 NMIGQGRFGTVYKGILGDD---EMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIK 766
+++G G F V IL +D + +VA+K I + +G S +E L I+H N++
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ I +E L+ + + G L D + + E LI V A+
Sbjct: 81 LDDI-----YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI------FQVLDAV 129
Query: 827 EYLHHHCQPPMVHGDLKPSNVL---LDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIG 883
+YLH +VH DLKP N+L LD D + DFGL+K + P S +
Sbjct: 130 KYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----------EDPGSVLS 176
Query: 884 IK-GTVGYVAP 893
GT GYVAP
Sbjct: 177 TACGTPGYVAP 187
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 85/190 (44%), Gaps = 34/190 (17%)
Query: 712 MIGQGRFGTVYKGILGDDEMVVAVKVIN---LKQKGASKSFVSECEALRNIRHRNLIKII 768
M+G+G FG V K + AVKVIN K K S + + E E L+ + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLF 87
Query: 769 TICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIE 827
I S+ F +V E G L D + ++ ++ S I V S I
Sbjct: 88 EILEDSSSF------YIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGIT 135
Query: 828 YLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIG 883
Y+H H +VH DLKP N+LL + D + DFGL+ F N + I
Sbjct: 136 YMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM-------KDRI- 184
Query: 884 IKGTVGYVAP 893
GT Y+AP
Sbjct: 185 --GTAYYIAP 192
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 23/167 (13%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ E++KLS A
Sbjct: 92 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 137
Query: 820 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
++A+A+ Y H ++H D+KP N+LL + DFG +
Sbjct: 138 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNL 764
F IG+G +G VYK VVA+K I L + +G + + E L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+K++ + + + LVFE++ L + D + + L + +
Sbjct: 65 VKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 115 GLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 28/172 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
F+ IG+G FG V+KGI + VVA+K+I+L++ + + I
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE-----------IT 77
Query: 767 IITICSS---TDFEGVDFK----ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+++ C S T + G K ++ EY+ GS D L E L Q I
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATIL 130
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHL 871
++ ++YLH + +H D+K +NVLL + DFG+A L++ +
Sbjct: 131 REILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 179
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 14/193 (7%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA-SKSFVSECEALRNIRHR 762
+S+F +++G+G +G V +VA+K I K + + E + L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
N+I I I FE + ++ E M+ LH+ + + LS
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRV---ISTQMLSDDHIQYFIYQT 121
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS- 881
A++ LH ++H DLKPSN+L++ + V DFGLA+ + D + T S
Sbjct: 122 LRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 882 -IGIKGTVGYVAP 893
+ T Y AP
Sbjct: 179 MVEFVATRWYRAP 191
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 28/190 (14%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI--RHRNLIKIITI 770
+G+GR+G V++G+ + VAVK+ + + + +S+ E E + RH N++ I
Sbjct: 16 VGKGRYGEVWRGLWHGES--VAVKIFSSRDE---QSWFRETEIYNTVLLRHDNILGFIAS 70
Query: 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
++ L+ Y E+GSL D+L + + + + +A+ A + +LH
Sbjct: 71 DMTSRNSSTQL-WLITHYHEHGSLYDFLQRQTLEPHLA-------LRLAVSAACGLAHLH 122
Query: 831 -----HHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS--NHHLDIASKTPSSSIG 883
+P + H D K NVL+ ++ + D GLA S + +LDI +
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV---- 178
Query: 884 IKGTVGYVAP 893
GT Y+AP
Sbjct: 179 --GTKRYMAP 186
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 77
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + V + LV +Y+ H S + + L +I + +
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 134
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 30/212 (14%)
Query: 684 DTSPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
D +EKL +VS + K + F IGQG GTVY + VA++ +NL+Q+
Sbjct: 3 DEEILEKLRIIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 59
Query: 744 GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSND 803
+ ++E +R ++ N++ + + D +V EY+ GSL D + ++
Sbjct: 60 PKKELIINEILVMRENKNPNIVNYL-----DSYLVGDELWVVMEYLAGGSLTDVVTETC- 113
Query: 804 QVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
++ +++ + R + A+E+LH + ++H ++K N+LL D + DFG
Sbjct: 114 -MDEGQIAAVCR-----ECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFC 164
Query: 864 KFLSNHHLDIASKTPSSSI--GIKGTVGYVAP 893
A TP S + GT ++AP
Sbjct: 165 ----------AQITPEQSKRSTMVGTPYWMAP 186
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + + ++A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 66 RHPNILRLYGY-----FHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 115
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 116 -ELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 160
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 161 SRRAALCGTLDYLPP 175
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNL 764
F IG+G +G VYK VVA+K I L + +G + + E L+ + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+K++ + + + LVFE++ L + D + + L + +
Sbjct: 72 VKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 122 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G + L + + E R + I
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT----- 120
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 121 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 165
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 166 SRRTTLCGTLDYLPP 180
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 28/172 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
F+ IG+G FG V+KGI + VVA+K+I+L++ + + I
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ-----------EIT 72
Query: 767 IITICSS---TDFEGVDFKA----LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+++ C S T + G K ++ EY+ GS D L E L Q I
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATIL 125
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHL 871
++ ++YLH + +H D+K +NVLL + DFG+A L++ +
Sbjct: 126 REILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 174
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ L + D + + L +
Sbjct: 63 HPNIVKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLF 112
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ L + D + + L +
Sbjct: 64 HPNIVKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLF 113
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ L + D + + L +
Sbjct: 63 HPNIVKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLF 112
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ L + D + + L +
Sbjct: 61 HPNIVKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLF 110
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ L + D + + L +
Sbjct: 64 HPNIVKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLF 113
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ L + D + + L +
Sbjct: 61 HPNIVKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLF 110
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ L + D + + L +
Sbjct: 61 HPNIVKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLF 110
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ L + D + + L +
Sbjct: 62 HPNIVKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLF 111
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 28/172 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
F+ IG+G FG V+KGI + VVA+K+I+L++ + + I
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ-----------EIT 57
Query: 767 IITICSS---TDFEGVDFKA----LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+++ C S T + G K ++ EY+ GS D L E L Q I
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATIL 110
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHL 871
++ ++YLH + +H D+K +NVLL + DFG+A L++ +
Sbjct: 111 REILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 159
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 28/172 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
F+ IG+G FG V+KGI + VVA+K+I+L++ + + I
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ-----------EIT 57
Query: 767 IITICSS---TDFEGVDFKA----LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+++ C S T + G K ++ EY+ GS D L E L Q I
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATIL 110
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHL 871
++ ++YLH + +H D+K +NVLL + DFG+A L++ +
Sbjct: 111 REILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 159
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ L + D + + L +
Sbjct: 62 HPNIVKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLF 111
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ L + D + + L +
Sbjct: 61 HPNIVKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLF 110
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ L + D + + L +
Sbjct: 65 HPNIVKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLF 114
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 115 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ L + D + + L +
Sbjct: 63 HPNIVKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLF 112
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ L + D + + L +
Sbjct: 62 HPNIVKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLF 111
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNL 764
F IG+G +G VYK VVA+K I L + +G + + E L+ + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+K++ + + + LVFE++ L + D + + L + +
Sbjct: 72 VKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 122 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 713 IGQGRFGTVY--KGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNLIKII 768
IG+G F V + IL E VA+K+I+ Q + + E ++ + H N++K+
Sbjct: 20 IGKGNFAKVKLARHILTGRE--VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 77
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + E + L+ EY G + D+L E S ++ + SA++Y
Sbjct: 78 EVIET---EKTLY--LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ------IVSAVQY 126
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA-KFLSNHHLDIASKTP 878
H Q +VH DLK N+LLD DM + DFG + +F LD +P
Sbjct: 127 CH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSP 174
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNL 764
F IG+G +G VYK VVA+K I L + +G + + E L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+K++ + + + LVFE++ L + D + + L + +
Sbjct: 64 VKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNL 764
F IG+G +G VYK VVA+K I L + +G + + E L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+K++ + + + LVFE++ L + D + + L + +
Sbjct: 65 VKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNL 764
F IG+G +G VYK VVA+K I L + +G + + E L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+K++ + + + LVFE++ L + D + + L + +
Sbjct: 65 VKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNL 764
F IG+G +G VYK VVA+K I L + +G + + E L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+K++ + + + LVFE++ L + D + + L + +
Sbjct: 64 VKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNL 764
F IG+G +G VYK VVA+K I L + +G + + E L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+K++ + + + LVFE++ L + D + + L + +
Sbjct: 64 VKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNL 764
F IG+G +G VYK VVA+K I L + +G + + E L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+K++ + + + LVFE++ L + D + + L + +
Sbjct: 66 VKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 116 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNL 764
F IG+G +G VYK VVA+K I L + +G + + E L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+K++ + + + LVFE++ L + D + + L + +
Sbjct: 65 VKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNL 764
F IG+G +G VYK VVA+K I L + +G + + E L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+K++ + + + LVFE++ L + D + + L + +
Sbjct: 64 VKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRH 761
S++ IGQG FG V+K VA+K + ++ ++G + + E + L+ ++H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 762 RNLIKIITICSSTDFEGVDFKA---LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
N++ +I IC + KA LVF++ E+ L L SN V K +L + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLL--SNVLV---KFTLSEIKRV 130
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
+ + + Y+H + ++H D+K +NVL+ D V + DFGLA+ S
Sbjct: 131 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 31/171 (18%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSF---VSECEALRNIRHRN 763
FS IG G FG VY + VVA+K ++ K +++ + + E L+ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 764 LIKIITICSSTDFEGVDFKA----LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
I+ + G + LV EY L ++D +EV K L Q + IA
Sbjct: 116 TIQ---------YRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPL-QEVEIA 157
Query: 820 IDVASAIE---YLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
A++ YLH H M+H D+K N+LL + +GDFG A ++
Sbjct: 158 AVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 35/190 (18%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA------SKSFVSECEALRNIRHRNLIK 766
+G G +G V +L D++ A + I + +K + S + + E L+ + H N++K
Sbjct: 29 LGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 85
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ FE LV E G L D + + +K S + I V S
Sbjct: 86 LYEF-----FEDKRNYYLVMEVYRGGELFD------EIILRQKFSEVDAAVIMKQVLSGT 134
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLD---YDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIG 883
YLH H +VH DLKP N+LL+ D + + DFGL+ H ++ K
Sbjct: 135 TYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSA-----HFEVGGKMKER--- 183
Query: 884 IKGTVGYVAP 893
GT Y+AP
Sbjct: 184 -LGTAYYIAP 192
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 26/191 (13%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDD----EMVVAVKVI--NLKQKGASKSFVSECEALRN 758
+E ++G G FGTVYKGI D ++ VA+KV+ N K A+K + E +
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK-ANKEILDEAYVMAG 75
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+ + +++ IC ++ + LV + M G L D + ++ ++ + L +N
Sbjct: 76 VGSPYVSRLLGICLTSTVQ------LVTQLMPYGCLLDHVRENRGRLGSQDL-----LNW 124
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL----SNHHLDIA 874
+ +A + YL +VH DL NVL+ + DFGLA+ L + +H D
Sbjct: 125 CMQIAKGMSYLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHAD-G 180
Query: 875 SKTPSSSIGIK 885
K P + ++
Sbjct: 181 GKVPIKWMALE 191
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 28/172 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
F+ + IG+G FG VYKGI + VVA+K+I+L++ + + I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQ-----------EIT 69
Query: 767 IITICSS---TDFEGVDFKA----LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+++ C S T + G K+ ++ EY+ GS D L +E ++ I R
Sbjct: 70 VLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPG--PLEETYIATILR---- 123
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHL 871
++ ++YLH + +H D+K +NVLL + DFG+A L++ +
Sbjct: 124 -EILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 171
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 16/190 (8%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA-SKSFVSECEALRNIRHR 762
+S+F +++G+G +G V +VA+K I K + + E + L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
N+I I I FE + ++ E M+ LH+ + + LS
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRV---ISTQMLSDDHIQYFIYQT 121
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSI 882
A++ LH ++H DLKPSN+L++ + V DFGLA+ + D + T S
Sbjct: 122 LRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS- 177
Query: 883 GIKGTVGYVA 892
G YVA
Sbjct: 178 ---GMTEYVA 184
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 37/199 (18%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA---------SKSFVSECEALR 757
+ ++G+G V + I AVK+I++ G+ ++ + E + LR
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 758 NIR-HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQ--SNDQVEVRKLSLIQ 814
+ H N+I++ +E F LVF+ M+ G L D+L + + + E RK+
Sbjct: 79 KVSGHPNIIQL-----KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI---- 129
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
M ++V A+ L+ +VH DLKP N+LLD DM + DFG + LD
Sbjct: 130 -MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS-----CQLDPG 177
Query: 875 SKTPSSSIGIKGTVGYVAP 893
K + GT Y+AP
Sbjct: 178 EKLRE----VCGTPSYLAP 192
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 37/199 (18%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA---------SKSFVSECEALR 757
+ ++G+G V + I AVK+I++ G+ ++ + E + LR
Sbjct: 6 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 758 NIR-HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQ--SNDQVEVRKLSLIQ 814
+ H N+I++ +E F LVF+ M+ G L D+L + + + E RK+
Sbjct: 66 KVSGHPNIIQL-----KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI---- 116
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
M ++V A+ L+ +VH DLKP N+LLD DM + DFG + LD
Sbjct: 117 -MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS-----CQLDPG 164
Query: 875 SKTPSSSIGIKGTVGYVAP 893
K + GT Y+AP
Sbjct: 165 EKLRE----VCGTPSYLAP 179
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 713 IGQGRFGTVY--KGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNLIKII 768
IG+G F V + IL E VA+K+I+ Q + + E ++ + H N++K+
Sbjct: 23 IGKGNFAKVKLARHILTGRE--VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + E + L+ EY G + D+L E S ++ + SA++Y
Sbjct: 81 EVIET---EKTLY--LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ------IVSAVQY 129
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA-KFLSNHHLDIASKTP 878
H Q +VH DLK N+LLD DM + DFG + +F LD P
Sbjct: 130 CH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAP 177
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE+++ L + D + + L +
Sbjct: 64 HPNIVKLLDVIHTENK-----LYLVFEHVDQD-----LKKFMDASALTGIPLPLIKSYLF 113
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 32/217 (14%)
Query: 684 DTSPMEKLFPMVSYAELSK---ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI-- 738
+ +P E+L E K A +F +G+G+FG VY + ++A+KV+
Sbjct: 1 ENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 60
Query: 739 -NLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDW 797
L++ G E E ++RH N++++ F L+ EY G++
Sbjct: 61 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRE 115
Query: 798 LHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHV 857
L + + E R + I ++A+A+ Y H ++H D+KP N+LL +
Sbjct: 116 LQKLSKFDEQRTATYIT------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKI 166
Query: 858 GDFGLAKFLSNHHLDIASKTPSS-SIGIKGTVGYVAP 893
DFG + PSS + GT+ Y+ P
Sbjct: 167 ADFGW-----------SVHAPSSRRTTLCGTLDYLPP 192
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 118
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 119 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 163
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 164 SRRAALCGTLDYLPP 178
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 115
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 116 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 160
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 161 SRRAALCGTLDYLPP 175
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ S++ L + D + + L +
Sbjct: 62 HPNIVKLLDVIHTENK-----LYLVFEFL---SMD--LKKFMDASALTGIPLPLIKSYLF 111
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ S++ L + D + + L +
Sbjct: 64 HPNIVKLLDVIHTENK-----LYLVFEFL---SMD--LKKFMDASALTGIPLPLIKSYLF 113
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 707 FSSSNMIGQGRFGTVY--KGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHR 762
+ IG+G F V + +L E VAVK+I+ Q + + E ++ + H
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGRE--VAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
N++K+ + + E + LV EY G + D+L E + ++ +
Sbjct: 75 NIVKLFEVIET---EKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------I 123
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA-KFLSNHHLDIASKTP 878
SA++Y H Q +VH DLK N+LLD DM + DFG + +F + LD +P
Sbjct: 124 VSAVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSP 177
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 36/178 (20%)
Query: 713 IGQGRFGTVYK----GILGDDEM-VVAVKVINLKQKGAS---KSFVSECEALRNIRHRNL 764
IG+G FG V++ G+L + +VAVK+ LK++ ++ F E + + N+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKM--LKEEASADMQADFQREAALMAEFDNPNI 112
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQ---------SNDQVEVRK------ 809
+K++ +C+ L+FEYM G L ++L S+ + R
Sbjct: 113 VKLLGVCAVGKP-----MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 167
Query: 810 ---LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
LS +++ IA VA+ + YL VH DL N L+ +MV + DFGL++
Sbjct: 168 PPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNL 764
F IG+G +G VYK VVA+K I L + +G + + E L+ + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+K++ + + + LVFE++ L + D + + L + +
Sbjct: 69 VKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 119 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRNIRH 761
+F ++G+G F TV A+K++ + K +V+ E + + + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 762 RNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMN 817
+K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 95 PFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------ 141
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 142 --AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQ 191
Query: 878 PSSSIGIKGTVGYVAP 893
++ + GT YV+P
Sbjct: 192 ARANXFV-GTAQYVSP 206
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 24/194 (12%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSEC---EALRNIRHRN 763
+ +G G FG V + I D VA+K +Q+ + K+ C + ++ + H N
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIK--QCRQELSPKNRERWCLEIQIMKKLNHPN 73
Query: 764 LIKIITICSS-TDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
++ + D L EY E G L +L+Q + +++ + + D+
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI---RTLLSDI 130
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLD---YDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
+SA+ YLH + ++H DLKP N++L ++ + D G AK L L
Sbjct: 131 SSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL-------- 179
Query: 880 SSIGIKGTVGYVAP 893
GT+ Y+AP
Sbjct: 180 -CTEFVGTLQYLAP 192
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 120
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 121 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 165
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 166 SRRTDLCGTLDYLPP 180
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 115
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 116 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 160
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 161 SRRTDLCGTLDYLPP 175
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 115
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 116 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 160
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 161 SRRTDLCGTLDYLPP 175
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 116
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 117 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 161
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 162 SRRTDLCGTLDYLPP 176
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 24/194 (12%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSEC---EALRNIRHRN 763
+ +G G FG V + I D VA+K +Q+ + K+ C + ++ + H N
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIK--QCRQELSPKNRERWCLEIQIMKKLNHPN 74
Query: 764 LIKIITICSS-TDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
++ + D L EY E G L +L+Q + +++ + + D+
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI---RTLLSDI 131
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLD---YDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
+SA+ YLH + ++H DLKP N++L ++ + D G AK L L
Sbjct: 132 SSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL-------- 180
Query: 880 SSIGIKGTVGYVAP 893
GT+ Y+AP
Sbjct: 181 -CTEFVGTLQYLAP 193
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 27/194 (13%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 68 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 117
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL G+ +A F + H + +T
Sbjct: 118 -ELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIANFGWSVHAPSSRRTT- 167
Query: 880 SSIGIKGTVGYVAP 893
+ GT+ Y+ P
Sbjct: 168 ----LCGTLDYLPP 177
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 27/194 (13%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 118
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL G+ +A F + H + +T
Sbjct: 119 -ELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIANFGWSVHAPSSRRTT- 168
Query: 880 SSIGIKGTVGYVAP 893
+ GT+ Y+ P
Sbjct: 169 ----LCGTLDYLPP 178
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 15/164 (9%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIR 760
+ F IG+G +G VYK VVA+K I L + +G + + E L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N++K++ + + + LVFE++ L D + + L +
Sbjct: 64 HPNIVKLLDVIHTENK-----LYLVFEFLHQD-----LKTFMDASALTGIPLPLIKSYLF 113
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRNIRH 761
+F ++G+G F TV A+K++ + K +V+ E + + + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 762 RNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMN 817
+K+ C D + L F Y +NG L ++ + S D+ R +
Sbjct: 97 PFFVKLY-FCFQDD------EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------ 143
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 144 --AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQ 193
Query: 878 PSSSIGIKGTVGYVAP 893
++ + GT YV+P
Sbjct: 194 ARANXFV-GTAQYVSP 208
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRN 758
K +F ++G+G F TV A+K++ + K +V+ E + +
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 63
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQ 814
+ H +K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 64 LDHPFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT--- 113
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS
Sbjct: 114 -----AEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE----- 160
Query: 875 SKTPSSSIGIKGTVGYVAP 893
SK ++ + GT YV+P
Sbjct: 161 SKQARANXFV-GTAQYVSP 178
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 70 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 119
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 120 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 164
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 165 SRRTTLCGTLDYLPP 179
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 118
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 119 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 163
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 164 SRRTTLCGTLDYLPP 178
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 65 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 114
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 115 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 159
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 160 SRRTTLCGTLDYLPP 174
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 120
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 121 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 165
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 166 SRRTTLCGTLDYLPP 180
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 118
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 119 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 163
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 164 SRRTTLCGTLDYLPP 178
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 120
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 121 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 165
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 166 SRRTTLCGTLDYLPP 180
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 115
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 116 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 160
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 161 SRRTTLCGTLDYLPP 175
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRN 758
K +F ++G+G F TV A+K++ + K +V+ E + +
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 65
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQ 814
+ H +K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 66 LDHPFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT--- 115
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS
Sbjct: 116 -----AEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE----- 162
Query: 875 SKTPSSSIGIKGTVGYVAP 893
SK ++ + GT YV+P
Sbjct: 163 SKQARANXFV-GTAQYVSP 180
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 68 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 117
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861
++A+A+ Y H ++H D+KP N+LL + DFG
Sbjct: 118 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 155
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRN 758
K +F ++G+G F TV A+K++ + K +V+ E + +
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 66
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQ 814
+ H +K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 67 LDHPFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT--- 116
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS
Sbjct: 117 -----AEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE----- 163
Query: 875 SKTPSSSIGIKGTVGYVAP 893
SK ++ + GT YV+P
Sbjct: 164 SKQARANXFV-GTAQYVSP 181
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 116
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861
++A+A+ Y H ++H D+KP N+LL + DFG
Sbjct: 117 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRNIRH 761
+F ++G+G F TV A+K++ + K +V+ E + + + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 762 RNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMN 817
+K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 92 PFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------ 138
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 139 --AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQ 188
Query: 878 PSSSIGIKGTVGYVAP 893
++ + GT YV+P
Sbjct: 189 ARANXFV-GTAQYVSP 203
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 118
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861
++A+A+ Y H ++H D+KP N+LL + DFG
Sbjct: 119 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRN 758
K +F ++G+G F TV A+K++ + K +V+ E + +
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQ 814
+ H +K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 65 LDHPFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT--- 114
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS
Sbjct: 115 -----AEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE----- 161
Query: 875 SKTPSSSIGIKGTVGYVAP 893
SK ++ + GT YV+P
Sbjct: 162 SKQARANXFV-GTAQYVSP 179
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 115
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861
++A+A+ Y H ++H D+KP N+LL + DFG
Sbjct: 116 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 115
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861
++A+A+ Y H ++H D+KP N+LL + DFG
Sbjct: 116 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 118
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861
++A+A+ Y H ++H D+KP N+LL + DFG
Sbjct: 119 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 115
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861
++A+A+ Y H ++H D+KP N+LL + DFG
Sbjct: 116 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRNIRH 761
+F ++G+G F TV A+K++ + K +V+ E + + + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 762 RNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMN 817
+K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 90 PFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------ 136
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 137 --AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQ 186
Query: 878 PSSSIGIKGTVGYVAP 893
++ + GT YV+P
Sbjct: 187 ARANAFV-GTAQYVSP 201
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 31/171 (18%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSF---VSECEALRNIRHRN 763
FS IG G FG VY + VVA+K ++ K +++ + + E L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 764 LIKIITICSSTDFEGVDFKA----LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
I+ + G + LV EY L ++D +EV K L Q + IA
Sbjct: 77 TIQ---------YRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPL-QEVEIA 118
Query: 820 IDVASAIE---YLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
A++ YLH H M+H D+K N+LL + +GDFG A ++
Sbjct: 119 AVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRNIRH 761
+F ++G+G F TV A+K++ + K +V+ E + + + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 762 RNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMN 817
+K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 92 PFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------ 138
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 139 --AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQ 188
Query: 878 PSSSIGIKGTVGYVAP 893
++ + GT YV+P
Sbjct: 189 ARANXFV-GTAQYVSP 203
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 35/199 (17%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA------SKSFVSECEALR 757
+ + +G G +G V +L D++ A + I + +K + S + + E L+
Sbjct: 3 SDRYQRVKKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 59
Query: 758 NIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMN 817
+ H N++K+ FE LV E G L D + + +K S +
Sbjct: 60 QLDHPNIMKLYEF-----FEDKRNYYLVMEVYRGGELFDEI------ILRQKFSEVDAAV 108
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---YDMVAHVGDFGLAKFLSNHHLDIA 874
I V S YLH H +VH DLKP N+LL+ D + + DFGL+ H ++
Sbjct: 109 IMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSA-----HFEVG 160
Query: 875 SKTPSSSIGIKGTVGYVAP 893
K GT Y+AP
Sbjct: 161 GKMKERL----GTAYYIAP 175
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRNIRH 761
+F ++G+G F TV A+K++ + K +V+ E + + + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 762 RNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMN 817
+K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 90 PFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------ 136
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 137 --AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQ 186
Query: 878 PSSSIGIKGTVGYVAP 893
++ + GT YV+P
Sbjct: 187 ARANXFV-GTAQYVSP 201
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRNIRH 761
+F ++G+G F TV A+K++ + K +V+ E + + + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 762 RNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMN 817
+K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 93 PFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------ 139
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 140 --AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQ 189
Query: 878 PSSSIGIKGTVGYVAP 893
++ + GT YV+P
Sbjct: 190 ARANXFV-GTAQYVSP 204
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 74/152 (48%), Gaps = 15/152 (9%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+G G+FG V+ + VAVK + ++F++E ++ ++H L+K+ + +
Sbjct: 190 LGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
++ E+M GSL D+L E K L + ++ + +A + ++
Sbjct: 248 KEPI------YIITEFMAKGSLLDFLKSD----EGSKQPLPKLIDFSAQIAEGMAFIE-- 295
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
Q +H DL+ +N+L+ +V + DFGLA+
Sbjct: 296 -QRNYIHRDLRAANILVSASLVCKIADFGLAR 326
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 713 IGQGRFGTVYKG---ILGDDEMVVAVKVIN---LKQKGASKSFVSECEALRNIRHRNLIK 766
+G G FG V +G + VAVK + L Q A F+ E A+ ++ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ + + + +V E GSL D L + + LS A+ VA +
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 128
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
YL +H DL N+LL + +GDFGL + L
Sbjct: 129 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 713 IGQGRFGTVYKG---ILGDDEMVVAVKVIN---LKQKGASKSFVSECEALRNIRHRNLIK 766
+G G FG V +G + VAVK + L Q A F+ E A+ ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ + + + +V E GSL D L + + LS A+ VA +
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 124
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
YL +H DL N+LL + +GDFGL + L
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 713 IGQGRFGTVYKG---ILGDDEMVVAVKVIN---LKQKGASKSFVSECEALRNIRHRNLIK 766
+G G FG V +G + VAVK + L Q A F+ E A+ ++ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ + + + +V E GSL D L + + LS A+ VA +
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 134
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
YL +H DL N+LL + +GDFGL + L
Sbjct: 135 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 713 IGQGRFGTVYKG---ILGDDEMVVAVKVIN---LKQKGASKSFVSECEALRNIRHRNLIK 766
+G G FG V +G + VAVK + L Q A F+ E A+ ++ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ + + + +V E GSL D L + + LS A+ VA +
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 134
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
YL +H DL N+LL + +GDFGL + L
Sbjct: 135 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 713 IGQGRFGTVYKG---ILGDDEMVVAVKVIN---LKQKGASKSFVSECEALRNIRHRNLIK 766
+G G FG V +G + VAVK + L Q A F+ E A+ ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ + + + +V E GSL D L + + LS A+ VA +
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 124
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
YL +H DL N+LL + +GDFGL + L
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 713 IGQGRFGTVYKG---ILGDDEMVVAVKVIN---LKQKGASKSFVSECEALRNIRHRNLIK 766
+G G FG V +G + VAVK + L Q A F+ E A+ ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ + + + +V E GSL D L + + LS A+ VA +
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 124
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
YL +H DL N+LL + +GDFGL + L
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRNIRH 761
+F ++G+G F TV A+K++ + K +V+ E + + + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 762 RNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMN 817
+K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 90 PFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------ 136
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 137 --AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQ 186
Query: 878 PSSSIGIKGTVGYVAP 893
++ + GT YV+P
Sbjct: 187 ARANXFV-GTAQYVSP 201
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRNIRH 761
+F ++G+G F TV A+K++ + K +V+ E + + + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 762 RNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMN 817
+K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 92 PFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------ 138
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 139 --AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQ 188
Query: 878 PSSSIGIKGTVGYVAP 893
++ + GT YV+P
Sbjct: 189 ARANXFV-GTAQYVSP 203
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRNIRH 761
+F ++G+G F TV A+K++ + K +V+ E + + + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 762 RNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMN 817
+K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 89 PFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------ 135
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 136 --AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQ 185
Query: 878 PSSSIGIKGTVGYVAP 893
++ + GT YV+P
Sbjct: 186 ARANXFV-GTAQYVSP 200
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRNIRH 761
+F ++G+G F TV A+K++ + K +V+ E + + + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 762 RNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMN 817
+K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 92 PFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------ 138
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 139 --AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQ 188
Query: 878 PSSSIGIKGTVGYVAP 893
++ + GT YV+P
Sbjct: 189 ARANXFV-GTAQYVSP 203
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRNIRH 761
+F ++G+G F TV A+K++ + K +V+ E + + + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 762 RNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMN 817
+K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 92 PFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------ 138
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 139 --AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQ 188
Query: 878 PSSSIGIKGTVGYVAP 893
++ + GT YV+P
Sbjct: 189 ARANXFV-GTAQYVSP 203
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 33/194 (17%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEM---VVAVKVINLKQ-KGASKSFVSECEALRNIRHR 762
F +G G F V +L +++ + AVK I K KG S +E LR I+H
Sbjct: 24 FEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
N++ + I +E + LV + + G L D + + E +LI++ V
Sbjct: 81 NIVALEDI-----YESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ------V 129
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
A+ YLH + +VH DLKP N+L D + + DFGL+K D+ S
Sbjct: 130 LDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKG--DVMSTAC- 183
Query: 880 SSIGIKGTVGYVAP 893
GT GYVAP
Sbjct: 184 ------GTPGYVAP 191
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 86/173 (49%), Gaps = 20/173 (11%)
Query: 710 SNMIGQGRFGTVYKGILGD---DEMVVAVKVINLKQKGASKS-FVSECEALRNIRHRNLI 765
+ ++G+G FG VY+G+ + +++ VAVK +K F+SE ++N+ H +++
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
K+I I + ++ E G L +L ++ + ++V L L ++ + A
Sbjct: 89 KLIGIIEE------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY-----SLQICKA 137
Query: 826 IEYLHH-HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
+ YL +C VH D+ N+L+ +GDFGL++++ + AS T
Sbjct: 138 MAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT 186
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 86/173 (49%), Gaps = 20/173 (11%)
Query: 710 SNMIGQGRFGTVYKGILGD---DEMVVAVKVINLKQKGASKS-FVSECEALRNIRHRNLI 765
+ ++G+G FG VY+G+ + +++ VAVK +K F+SE ++N+ H +++
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
K+I I + ++ E G L +L ++ + ++V L L ++ + A
Sbjct: 73 KLIGIIEE------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY-----SLQICKA 121
Query: 826 IEYLHH-HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
+ YL +C VH D+ N+L+ +GDFGL++++ + AS T
Sbjct: 122 MAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT 170
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 86/173 (49%), Gaps = 20/173 (11%)
Query: 710 SNMIGQGRFGTVYKGILGD---DEMVVAVKVINLKQKGASKS-FVSECEALRNIRHRNLI 765
+ ++G+G FG VY+G+ + +++ VAVK +K F+SE ++N+ H +++
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
K+I I + ++ E G L +L ++ + ++V L L ++ + A
Sbjct: 77 KLIGIIEE------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY-----SLQICKA 125
Query: 826 IEYLHH-HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
+ YL +C VH D+ N+L+ +GDFGL++++ + AS T
Sbjct: 126 MAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT 174
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNL 764
++ +IG G V + VA+K INL++ + + + E +A+ H N+
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI---D 821
+ T F D LV + + GS+ D + + E K ++ IA +
Sbjct: 71 VSYYT-----SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGE-HKSGVLDESTIATILRE 124
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
V +EYLH + Q +H D+K N+LL D + DFG++ FL+
Sbjct: 125 VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLA 167
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNL 764
++ +IG G V + VA+K INL++ + + + E +A+ H N+
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI---D 821
+ T F D LV + + GS+ D + + E K ++ IA +
Sbjct: 76 VSYYT-----SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGE-HKSGVLDESTIATILRE 129
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
V +EYLH + Q +H D+K N+LL D + DFG++ FL+
Sbjct: 130 VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLA 172
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 86/195 (44%), Gaps = 35/195 (17%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDD---EMVVAVKVINLKQ-KGASKSFVSECEALRNIRHR 762
+ +++G G F V IL +D + +VA+K I K +G S +E L I+H
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHP 76
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
N++ + I +E L+ + + G L D + + E LI V
Sbjct: 77 NIVALDDI-----YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI------FQV 125
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVL---LDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
A++YLH +VH DLKP N+L LD D + DFGL+K + P
Sbjct: 126 LDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----------EDPG 172
Query: 880 SSIGIK-GTVGYVAP 893
S + GT GYVAP
Sbjct: 173 SVLSTACGTPGYVAP 187
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRH 761
S++ IGQG FG V+K VA+K + ++ ++G + + E + L+ ++H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 762 RNLIKIITICSSTDFEGVDFKA---LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
N++ +I IC + K LVF++ E+ L L SN V K +L + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL--SNVLV---KFTLSEIKRV 130
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
+ + + Y+H + ++H D+K +NVL+ D V + DFGLA+ S
Sbjct: 131 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 713 IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIK 766
+G G FG VY+G + +D + V V L + + + F+ E + + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 767 IITICSSTDFEGVDFKAL----VFEYMENGSLEDWLHQSNDQV-EVRKLSLIQRMNIAID 821
I GV ++L + E M G L+ +L ++ + + L+++ +++A D
Sbjct: 113 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAK 864
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 164 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 21/187 (11%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIK---- 766
IG G +G K D ++ K ++ + + VSE LR ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
II ++T + +V EY E G L + + + + + R+ + +A
Sbjct: 74 IIDRTNTTLY-------IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKG 886
+ ++H DLKP+NV LD +GDFGLA+ L NH A G
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAK-------AFVG 178
Query: 887 TVGYVAP 893
T Y++P
Sbjct: 179 TPYYMSP 185
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRNIRH 761
+F ++G+G F TV A+K++ + K +V+ E + + + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 762 RNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMN 817
+K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 93 PFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------ 139
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 140 --AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQ 189
Query: 878 PSSSIGIKGTVGYVAP 893
++ + GT YV+P
Sbjct: 190 ARANSFV-GTAQYVSP 204
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNI 759
A +F +G+G+FG VY + ++A+KV+ L++ G E E ++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH N++++ F L+ EY G++ L + + E R + I
Sbjct: 63 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----- 112
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++A+A+ Y H ++H D+KP N+LL + DFG + PS
Sbjct: 113 -ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 157
Query: 880 S-SIGIKGTVGYVAP 893
S + GT+ Y+ P
Sbjct: 158 SRRTTLCGTLDYLPP 172
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 29/192 (15%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNIRHR 762
+F +G+G+FG VY + ++A+KV+ L++ G E E ++RH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
N++++ F L+ EY G++ L + + E R + I ++
Sbjct: 73 NILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT------EL 121
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSS-S 881
A+A+ Y H ++H D+KP N+LL + + DFG + PSS
Sbjct: 122 ANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGW-----------SVHAPSSRR 167
Query: 882 IGIKGTVGYVAP 893
+ GT+ Y+ P
Sbjct: 168 TTLCGTLDYLPP 179
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNIRHR 762
+F +G+G+FG VY + ++A+KV+ L++ G E E ++RH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
N++++ F L+ EY G++ L + + E R + I ++
Sbjct: 73 NILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT------EL 121
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861
A+A+ Y H ++H D+KP N+LL + + DFG
Sbjct: 122 ANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 713 IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIK 766
+G G FG VY+G + +D + V V L + + + F+ E + + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 767 IITICSSTDFEGVDFKAL----VFEYMENGSLEDWLHQSNDQV-EVRKLSLIQRMNIAID 821
I GV ++L + E M G L+ +L ++ + + L+++ +++A D
Sbjct: 99 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAK 864
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 150 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 14/193 (7%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA-SKSFVSECEALRNIRHR 762
+S+F +++G+G +G V +VA+K I K + + E + L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
N+I I I FE + ++ E M+ LH+ + + LS
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRV---ISTQMLSDDHIQYFIYQT 121
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS- 881
A++ LH ++H DLKPSN+L++ + V DFGLA+ + D + T S
Sbjct: 122 LRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 882 -IGIKGTVGYVAP 893
T Y AP
Sbjct: 179 MTEXVATRWYRAP 191
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 31/195 (15%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRNIRHR 762
+F ++G+G F TV A+K++ + K +V+ E + + + H
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 763 NLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMNI 818
+K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 75 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------- 120
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 121 -AEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQA 171
Query: 879 SSSIGIKGTVGYVAP 893
++ + GT YV+P
Sbjct: 172 RANXFV-GTAQYVSP 185
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 713 IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIK 766
+G G FG VY+G + +D + V V L + + + F+ E + H+N+++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 767 IITICSSTDFEGVDFKAL----VFEYMENGSLEDWLHQSNDQV-EVRKLSLIQRMNIAID 821
I GV ++L + E M G L+ +L ++ + + L+++ +++A D
Sbjct: 139 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 189
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAK 864
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 190 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRNIRH 761
+F ++G+G F TV A+K++ + K +V+ E + + + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 762 RNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMN 817
+K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 89 PFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------ 135
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 136 --AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQ 185
Query: 878 PSSSIGIKGTVGYVAP 893
++ + GT YV+P
Sbjct: 186 ARANSFV-GTAQYVSP 200
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 21/187 (11%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIK---- 766
IG G +G K D ++ K ++ + + VSE LR ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
II ++T + +V EY E G L + + + + + R+ + +A
Sbjct: 74 IIDRTNTTLY-------IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKG 886
+ ++H DLKP+NV LD +GDFGLA+ L NH A G
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAKT-------FVG 178
Query: 887 TVGYVAP 893
T Y++P
Sbjct: 179 TPYYMSP 185
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRH 761
S++ IGQG FG V+K VA+K + ++ ++G + + E + L+ ++H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 762 RNLIKIITICSSTDFEGVDFKA---LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
N++ +I IC + K LVF++ E+ L L SN V K +L + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL--SNVLV---KFTLSEIKRV 130
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
+ + + Y+H + ++H D+K +NVL+ D V + DFGLA+ S
Sbjct: 131 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRH 761
S++ IGQG FG V+K VA+K + ++ ++G + + E + L+ ++H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 762 RNLIKIITICSSTDFEGVDFKA---LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
N++ +I IC + K LVF++ E+ L L SN V K +L + +
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL--SNVLV---KFTLSEIKRV 129
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
+ + + Y+H + ++H D+K +NVL+ D V + DFGLA+ S
Sbjct: 130 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 175
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNL 764
F IG+G +G VYK VVA+K I L + +G + + E L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+K++ + + + LVFE++ L D + + L + +
Sbjct: 64 VKLLDVIHTENK-----LYLVFEHVHQD-----LKTFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 713 IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIK 766
+G G FG VY+G + +D + V V L + + + F+ E + H+N+++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 767 IITICSSTDFEGVDFKAL----VFEYMENGSLEDWLHQSNDQV-EVRKLSLIQRMNIAID 821
I GV ++L + E M G L+ +L ++ + + L+++ +++A D
Sbjct: 90 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 140
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAK 864
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 141 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 713 IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIK 766
+G G FG VY+G + +D + V V L + + + F+ E + H+N+++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 767 IITICSSTDFEGVDFKAL----VFEYMENGSLEDWLHQSNDQV-EVRKLSLIQRMNIAID 821
I GV ++L + E M G L+ +L ++ + + L+++ +++A D
Sbjct: 115 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 165
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAK 864
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 166 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 22/157 (14%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITI 770
IG+G +GTV+K + +VA+K + L +G S + E L+ ++H+N++++ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 771 CSSTDFEGVDFK-ALVFEYMENGSLEDWLHQSNDQV--EVRKLSLIQRMNIAIDVASAIE 827
S D K LVFE+ + L+ + N + E+ K L Q + +
Sbjct: 70 LHS------DKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLK-------GLG 115
Query: 828 YLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ H ++H DLKP N+L++ + + DFGLA+
Sbjct: 116 FCHSR---NVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRNIRH 761
+F ++G+G F TV A+K++ + K +V+ E + + + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 762 RNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMN 817
+K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 92 PFFVKLY-------FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYT------ 138
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 139 --AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQ 188
Query: 878 PSSSIGIKGTVGYVAP 893
++ + GT YV+P
Sbjct: 189 ARANSFV-GTAQYVSP 203
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 713 IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIK 766
+G G FG VY+G + +D + V V L + + + F+ E + H+N+++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 767 IITICSSTDFEGVDFKAL----VFEYMENGSLEDWLHQSNDQV-EVRKLSLIQRMNIAID 821
I GV ++L + E M G L+ +L ++ + + L+++ +++A D
Sbjct: 116 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 166
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAK 864
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 167 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 33/191 (17%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIRHRNLIK 766
+G G+F V K + A K I +Q AS+ VS E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ + +E L+ E + G L D+L Q E S I++ + +
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDGV 128
Query: 827 EYLHHHCQPPMVHGDLKPSNV-LLDYDM-VAHVG--DFGLAKFLSNHHLDIASKTPSSSI 882
YLH + H DLKP N+ LLD ++ + H+ DFGLA H ++ + +
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN--- 177
Query: 883 GIKGTVGYVAP 893
I GT +VAP
Sbjct: 178 -IFGTPEFVAP 187
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 713 IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIK 766
+G G FG VY+G + +D + V V L + + + F+ E + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 767 IITICSSTDFEGVDFKAL----VFEYMENGSLEDWLHQSNDQV-EVRKLSLIQRMNIAID 821
I GV ++L + E M G L+ +L ++ + + L+++ +++A D
Sbjct: 99 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAK 864
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 150 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 713 IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIK 766
+G G FG VY+G + +D + V V L + + + F+ E + H+N+++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 767 IITICSSTDFEGVDFKAL----VFEYMENGSLEDWLHQSNDQV-EVRKLSLIQRMNIAID 821
I GV ++L + E M G L+ +L ++ + + L+++ +++A D
Sbjct: 105 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 155
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAK 864
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 156 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 713 IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIK 766
+G G FG VY+G + +D + V V L + + + F+ E + H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 767 IITICSSTDFEGVDFKAL----VFEYMENGSLEDWLHQSNDQV-EVRKLSLIQRMNIAID 821
I GV ++L + E M G L+ +L ++ + + L+++ +++A D
Sbjct: 98 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 148
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAK 864
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 149 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 28/172 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
F+ IG+G FG V+KGI + VVA+K+I+L++ + + I
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQE-----------IT 73
Query: 767 IITICSS---TDFEGVDFKA----LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+++ C S T + G K ++ EY+ GS D L Q +
Sbjct: 74 VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG-------PFDEFQIATML 126
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHL 871
++ ++YLH + +H D+K +NVLL + DFG+A L++ +
Sbjct: 127 KEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 175
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 713 IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIK 766
+G G FG VY+G + +D + V V L + + + F+ E + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 767 IITICSSTDFEGVDFKAL----VFEYMENGSLEDWLHQSNDQV-EVRKLSLIQRMNIAID 821
I GV ++L + E M G L+ +L ++ + + L+++ +++A D
Sbjct: 113 CI---------GVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAK 864
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 164 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 713 IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIK 766
+G G FG VY+G + +D + V V L + + + F+ E + H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 767 IITICSSTDFEGVDFKAL----VFEYMENGSLEDWLHQSNDQV-EVRKLSLIQRMNIAID 821
I GV ++L + E M G L+ +L ++ + + L+++ +++A D
Sbjct: 98 CI---------GVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 148
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAK 864
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 149 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNL 764
F IG+G +G VYK VVA+ I L + +G + + E L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+K++ + + + LVFE++ L + D + + L + +
Sbjct: 65 VKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNL 764
F IG+G +G VYK VVA+ I L + +G + + E L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+K++ + + + LVFE++ L + D + + L + +
Sbjct: 64 VKLLDVIHTENK-----LYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 17/161 (10%)
Query: 711 NMIGQGRFGTV---YKGILGDDE-MVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
+ +G+G FG+V LGD+ +VAVK + + F E + L+ + ++K
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ + + LV EY+ +G L D+L + +++ +L L + + +
Sbjct: 77 YRGVSYGPGRQSL---RLVMEYLPSGCLRDFLQRHRARLDASRLLLY-----SSQICKGM 128
Query: 827 EYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
EYL C VH DL N+L++ + + DFGLAK L
Sbjct: 129 EYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL 165
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 17/161 (10%)
Query: 711 NMIGQGRFGTV---YKGILGDDE-MVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
+ +G+G FG+V LGD+ +VAVK + + F E + L+ + ++K
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ + + LV EY+ +G L D+L + +++ +L L + + +
Sbjct: 76 YRGVSYGPGRQSL---RLVMEYLPSGCLRDFLQRHRARLDASRLLLY-----SSQICKGM 127
Query: 827 EYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
EYL C VH DL N+L++ + + DFGLAK L
Sbjct: 128 EYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL 164
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 77
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 134
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 17/161 (10%)
Query: 711 NMIGQGRFGTV---YKGILGDDE-MVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
+ +G+G FG+V LGD+ +VAVK + + F E + L+ + ++K
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ + + LV EY+ +G L D+L + +++ +L L + + +
Sbjct: 89 YRGVSYGPGRQSL---RLVMEYLPSGCLRDFLQRHRARLDASRLLLY-----SSQICKGM 140
Query: 827 EYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
EYL C VH DL N+L++ + + DFGLAK L
Sbjct: 141 EYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL 177
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 78
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 135
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 136 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 77
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 134
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 77
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 134
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 711 NMIGQGRFGTV----YKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
+ +G+G FG+V Y + + +VAVK + + F E + L+ + ++K
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 767 IITICSSTDFEGVDFKA------LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
+ GV + LV EY+ +G L D+L + +++ +L L
Sbjct: 73 ---------YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS----- 118
Query: 821 DVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ +EYL C VH DL N+L++ + + DFGLAK L
Sbjct: 119 QICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL 161
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 713 IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIK 766
+G G FG VY+G + +D + V V L + + + F+ E + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 767 IITICSSTDFEGVDFKAL----VFEYMENGSLEDWLHQSNDQV-EVRKLSLIQRMNIAID 821
I GV ++L + E M G L+ +L ++ + + L+++ +++A D
Sbjct: 113 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAK 864
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 164 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVS-ECEALRNIRH 761
+F ++G+G F T A+K++ + K +V+ E + + + H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 762 RNLIKIITICSSTDFEGVDFKALVF--EYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMN 817
+K+ F D + L F Y +NG L ++ + S D+ R +
Sbjct: 90 PFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------ 136
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 137 --AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQ 186
Query: 878 PSSSIGIKGTVGYVAP 893
++ + GT YV+P
Sbjct: 187 ARANXFV-GTAQYVSP 201
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 713 IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIK 766
+G G FG VY+G + +D + V V L + + + F+ E + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 767 IITICSSTDFEGVDFKAL----VFEYMENGSLEDWLHQSNDQV-EVRKLSLIQRMNIAID 821
I GV ++L + E M G L+ +L ++ + + L+++ +++A D
Sbjct: 99 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAK 864
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 150 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 89
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 146
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 147 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 713 IGQGRFGTVY--KGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNLIKII 768
IG+G F V + IL E VAVK+I+ Q +S + E + + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWL--HQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ + E + LV EY G + D+L H + E R + SA+
Sbjct: 80 EVIET---EKTLY--LVXEYASGGEVFDYLVAHGRXKEKEARAKFR--------QIVSAV 126
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA-KFLSNHHLDIASKTP 878
+Y H Q +VH DLK N+LLD D + DFG + +F + LD P
Sbjct: 127 QYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAP 176
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 115
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 172
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 173 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 211
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 113
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 170
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 171 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 209
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 156
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 213
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 214 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 252
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 713 IGQGRFGTVYKGIL---GDDEMVVAVKVIN---LKQKGASKSFVSECEALRNIRHRNLIK 766
+G G FG V +G + VAVK + L Q A F+ E A+ ++ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ + + + +V E GSL D L + + LS A+ VA +
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 128
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
YL +H DL N+LL + +GDFGL + L
Sbjct: 129 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 81
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 138
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 139 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 82
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 139
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 140 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 178
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 713 IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGASK---SFVSECEALRNIRHRNLIK 766
+G G FG VY+G + +D + V V L + + + F+ E + H+N+++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 767 IITICSSTDFEGVDFKAL----VFEYMENGSLEDWLHQSNDQV-EVRKLSLIQRMNIAID 821
I GV ++L + E M G L+ +L ++ + + L+++ +++A D
Sbjct: 125 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 175
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAK 864
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 176 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 90
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 147
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 148 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 96
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 153
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 154 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 111
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 168
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 169 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + Q A K+ E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIVR 77
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 134
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + Q A K+ E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIVR 77
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 134
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 85
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 142
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 143 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 105
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 162
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 163 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 201
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 111
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 168
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 169 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 22/196 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--SKSFVSECEALRNIRHR 762
++ IG+G +G V+K D +VA+K + K + E L+ ++H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
NL+ ++ + F LVFEY ++ L H+ + L++ +I
Sbjct: 63 NLVNLLEV-----FRRKRRLHLVFEYCDHTVL----HELDRYQRGVPEHLVK--SITWQT 111
Query: 823 ASAIEYLH-HHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL---SNHHLD-IASKT 877
A+ + H H+C +H D+KP N+L+ V + DFG A+ L S+++ D +A++
Sbjct: 112 LQAVNFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRW 167
Query: 878 PSSSIGIKGTVGYVAP 893
S + G Y P
Sbjct: 168 YRSPELLVGDTQYGPP 183
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + ++ ++ E + +R + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 89
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 146
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 147 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 700 LSKATSE-FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI----NLKQKGASKSFVSECE 754
L+K E F +G+G +G+VYK I + +VA+K + +L++ S + +C+
Sbjct: 23 LTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCD 82
Query: 755 ALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
+ +++ + F+ D +V EY GS+ D + N + +++ I
Sbjct: 83 SPHVVKY----------YGSYFKNTDL-WIVMEYCGAGSVSDIIRLRNKTLTEDEIATIL 131
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
+ + +EYLH + +H D+K N+LL+ + A + DFG+A L++
Sbjct: 132 QSTL-----KGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 78/144 (54%), Gaps = 20/144 (13%)
Query: 713 IGQGRFGTVYKGI---LGD----DEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+GQG F ++KG+ +GD E V +KV++ + S+SF + + H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+C D E + LV E+++ GSL+ +L ++ + + +++ ++ +A +A+A
Sbjct: 76 LNYGVCVCGD-ENI----LVQEFVKFGSLDTYLKKNKNCI-----NILWKLEVAKQLAAA 125
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLL 849
+ +L + ++HG++ N+LL
Sbjct: 126 MHFLEENT---LIHGNVCAKNILL 146
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 86/195 (44%), Gaps = 35/195 (17%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDD---EMVVAVKVINLKQ-KGASKSFVSECEALRNIRHR 762
+ +++G G F V IL +D + +VA+K I + +G S +E L I+H
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP 76
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
N++ + I +E L+ + + G L D + + E LI V
Sbjct: 77 NIVALDDI-----YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI------FQV 125
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVL---LDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
A++YLH +VH DLKP N+L LD D + DFGL+K + P
Sbjct: 126 LDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----------EDPG 172
Query: 880 SSIGIK-GTVGYVAP 893
S + GT GYVAP
Sbjct: 173 SVLSTACGTPGYVAP 187
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 86/195 (44%), Gaps = 35/195 (17%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDD---EMVVAVKVINLKQ-KGASKSFVSECEALRNIRHR 762
+ +++G G F V IL +D + +VA+K I + +G S +E L I+H
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP 76
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
N++ + I +E L+ + + G L D + + E LI V
Sbjct: 77 NIVALDDI-----YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI------FQV 125
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVL---LDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
A++YLH +VH DLKP N+L LD D + DFGL+K + P
Sbjct: 126 LDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----------EDPG 172
Query: 880 SSIGIK-GTVGYVAP 893
S + GT GYVAP
Sbjct: 173 SVLSTACGTPGYVAP 187
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 31/202 (15%)
Query: 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFV-SECE 754
Y EL K + IG G F V +VA+K+++ G+ + +E E
Sbjct: 4 DYDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIE 60
Query: 755 ALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
AL+N+RH+++ ++ + E + +V EY G L D++ S D++ + ++
Sbjct: 61 ALKNLRHQHICQLYHV-----LETANKIFMVLEYCPGGELFDYI-ISQDRLSEEETRVVF 114
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA---KFLSNHHL 871
R + SA+ Y+H H DLKP N+L D + DFGL K ++HL
Sbjct: 115 RQ-----IVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHL 166
Query: 872 DIASKTPSSSIGIKGTVGYVAP 893
G++ Y AP
Sbjct: 167 QTCC----------GSLAYAAP 178
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 99/230 (43%), Gaps = 38/230 (16%)
Query: 680 HKSVDTSPMEKLFPMVSYAELSKA-----------TSEFSSSNMIGQGRFGTVYKGILGD 728
+ + SP+ + ++ Y E +K +F +IG+G FG V L +
Sbjct: 38 YDECNNSPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKN 97
Query: 729 DEMVVAVKVIN---LKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALV 785
+ V A+K++N + ++ + F E + L N K IT F+ + LV
Sbjct: 98 ADKVFAMKILNKWEMLKRAETACFREERDVLVN----GDSKWITTLHYA-FQDDNNLYLV 152
Query: 786 FEYMENGSLEDWLHQSNDQV--EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+Y G L L + D++ E+ + L + M IAID + Y VH D+K
Sbjct: 153 MDYYVGGDLLTLLSKFEDRLPEEMARFYLAE-MVIAIDSVHQLHY---------VHRDIK 202
Query: 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
P N+L+D + + DFG L + T SS+ + GT Y++P
Sbjct: 203 PDNILMDMNGHIRLADFGSCLKL------MEDGTVQSSVAV-GTPDYISP 245
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 719 GTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778
G ++KG +++VV V + S+ F EC LR H N++ ++ C S
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP--- 80
Query: 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMV 838
L+ +M GSL + LH+ + V + Q + A+D+A + +L H +P +
Sbjct: 81 APHPTLITHWMPYGSLYNVLHEGTNFV----VDQSQAVKFALDMARGMAFL-HTLEPLIP 135
Query: 839 HGDLKPSNVLLDYDMVAHV 857
L +V++D DM A +
Sbjct: 136 RHALNSRSVMIDEDMTARI 154
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNLIKII 768
+IG+GRFG VY G + VA+++I++++ K+F E A R RH N++ +
Sbjct: 39 ELIGKGRFGQVYHGRWHGE---VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
C S A++ + +L + + ++V K IA ++ + Y
Sbjct: 96 GACMSP-----PHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR-----QIAQEIVKGMGY 145
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862
LH ++H DLK NV D V + DFGL
Sbjct: 146 LH---AKGILHKDLKSKNVFYDNGKVV-ITDFGL 175
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 27/201 (13%)
Query: 698 AELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEA 755
A ++ T ++ +G+G F V + + A K+IN K+ A + E
Sbjct: 24 ATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARI 83
Query: 756 LRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQR 815
R ++H N++++ S EG F LVF+ + G L + D V S
Sbjct: 84 CRLLKHPNIVRLH---DSISEEG--FHYLVFDLVTGGELFE------DIVAREYYSEADA 132
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAKFLSNHHLD 872
+ + ++ ++H H +VH DLKP N+LL + DFGLA ++
Sbjct: 133 SHCIHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA-------IE 182
Query: 873 IASKTPSSSIGIKGTVGYVAP 893
+ + + G GT GY++P
Sbjct: 183 VQGEQ-QAWFGFAGTPGYLSP 202
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
++ + +IG G FG VY+ L D +VA+K + Q A K+ E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIVR 77
Query: 767 I-ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ SS + + + LV +Y+ H S + + L +I + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAK---QTLPVIYVKLYMYQLFRS 134
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFL 866
+ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 27/186 (14%)
Query: 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITI 770
++G G F V+ + A+K I S +E L+ I+H N++ + I
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
+E LV + + G L D + + E +IQ+ V SA++YLH
Sbjct: 75 -----YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ------VLSAVKYLH 123
Query: 831 HHCQPPMVHGDLKPSNVLL---DYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGT 887
+ +VH DLKP N+L + + + DFGL+K N + A TP
Sbjct: 124 EN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTP--------- 171
Query: 888 VGYVAP 893
GYVAP
Sbjct: 172 -GYVAP 176
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 699 ELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN---LKQKGASKSFVSECEA 755
E+ +F +IG+G FG V + + E + A+K++N + ++ + F E +
Sbjct: 68 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV 127
Query: 756 LRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQV-EVRKLSLIQ 814
L N + IT F+ + LV +Y G L L + D++ E I
Sbjct: 128 LVN----GDCQWITALHYA-FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG 182
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
M +AID +I LH+ VH D+KP NVLLD + + DFG +++
Sbjct: 183 EMVLAID---SIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMND------ 227
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T SS+ + GT Y++P
Sbjct: 228 DGTVQSSVAV-GTPDYISP 245
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 77/144 (53%), Gaps = 20/144 (13%)
Query: 713 IGQGRFGTVYKGI---LGD----DEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+GQG F ++KG+ +GD E V +KV++ + S+SF + + H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+C F G D LV E+++ GSL+ +L ++ + + +++ ++ +A +A A
Sbjct: 76 LNYGVC----FCG-DENILVQEFVKFGSLDTYLKKNKNCI-----NILWKLEVAKQLAWA 125
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLL 849
+ +L + ++HG++ N+LL
Sbjct: 126 MHFLEENT---LIHGNVCAKNILL 146
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 699 ELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN---LKQKGASKSFVSECEA 755
E+ +F +IG+G FG V + + E + A+K++N + ++ + F E +
Sbjct: 84 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV 143
Query: 756 LRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQV-EVRKLSLIQ 814
L N + IT F+ + LV +Y G L L + D++ E I
Sbjct: 144 LVN----GDCQWITALHYA-FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG 198
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
M +AID +I LH+ VH D+KP NVLLD + + DFG +++
Sbjct: 199 EMVLAID---SIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMND------ 243
Query: 875 SKTPSSSIGIKGTVGYVAP 893
T SS+ + GT Y++P
Sbjct: 244 DGTVQSSVAV-GTPDYISP 261
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 54/190 (28%), Positives = 82/190 (43%), Gaps = 27/190 (14%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINL-KQKGASKSFVSECEALRNIRHRNLIKIITIC 771
+G G FG V+ + +K IN + + + +E E L+++ H N+IKI +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV- 88
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
FE +V E E G L + + + Q + LS + + +A+ Y H
Sbjct: 89 ----FEDYHNMYIVMETCEGGELLERIVSA--QARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAH----VGDFGLAK-FLSNHHLDIASKTPSSSIGIKG 886
+VH DLKP N+L D H + DFGLA+ F S+ H S G
Sbjct: 143 Q---HVVHKDLKPENILFQ-DTSPHSPIKIIDFGLAELFKSDEH----------STNAAG 188
Query: 887 TVGYVAPGKF 896
T Y+AP F
Sbjct: 189 TALYMAPEVF 198
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 23/193 (11%)
Query: 678 STHKSVDTSPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKV 737
S H+S P E++ P Y + T E +G G FGTV KG ++V V V
Sbjct: 2 SLHESPYADP-EEIRPKEVYLDRKLLTLE---DKELGSGNFGTVKKGYYQMKKVVKTVAV 57
Query: 738 INLKQKGASKSF----VSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGS 793
LK + + ++E ++ + + ++++I IC + + LV E E G
Sbjct: 58 KILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW------MLVMEMAELGP 111
Query: 794 LEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM 853
L +L Q+ + + L+ + V+ ++YL + VH DL NVLL
Sbjct: 112 LNKYLQQNRHVKDKNIIELVHQ------VSMGMKYLE---ESNFVHRDLAARNVLLVTQH 162
Query: 854 VAHVGDFGLAKFL 866
A + DFGL+K L
Sbjct: 163 YAKISDFGLSKAL 175
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 74
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHI---- 130
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 131 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
Query: 870 H 870
H
Sbjct: 182 H 182
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 31 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 90
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 146
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 147 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 197
Query: 870 H 870
H
Sbjct: 198 H 198
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 70
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 126
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 127 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 177
Query: 870 H 870
H
Sbjct: 178 H 178
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 13 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 72
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 128
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 129 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 179
Query: 870 H 870
H
Sbjct: 180 H 180
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 16/168 (9%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNL 764
+++ + IG+G +G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
I I I + E + +V + ME L H SND + +
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI----------CYFLYQI 133
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHH 870
++Y+H ++H DLKPSN+LL+ + DFGLA+ H
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDH 178
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 16 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 75
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 131
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 132 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 182
Query: 870 H 870
H
Sbjct: 183 H 183
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 74
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 130
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 131 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 181
Query: 870 H 870
H
Sbjct: 182 H 182
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 17 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 76
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 77 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 132
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 133 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 183
Query: 870 H 870
H
Sbjct: 184 H 184
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 8 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 67
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 68 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 123
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 124 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 174
Query: 870 H 870
H
Sbjct: 175 H 175
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 74
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 130
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 131 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
Query: 870 H 870
H
Sbjct: 182 H 182
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 19 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 78
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 134
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 135 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 185
Query: 870 H 870
H
Sbjct: 186 H 186
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 70
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 126
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 127 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 177
Query: 870 H 870
H
Sbjct: 178 H 178
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 24/166 (14%)
Query: 713 IGQGRFGTVYKGIL-----GDDEMVVAVKVINLKQKGA-SKSFVSECEALRNIRHRNLIK 766
+G+ RFG VYKG L G+ VA+K + K +G + F E ++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWL----------HQSNDQVEVRKLSLIQRM 816
++ + + +++F Y +G L ++L +D+ L +
Sbjct: 77 LLGVVTKD-----QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862
++ +A+ +EYL H +VH DL NVL+ + + D GL
Sbjct: 132 HLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGL 174
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 74
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 130
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 131 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
Query: 870 H 870
H
Sbjct: 182 H 182
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 9 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 68
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 124
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 125 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 175
Query: 870 H 870
H
Sbjct: 176 H 176
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 16 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 75
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 131
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 132 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 182
Query: 870 H 870
H
Sbjct: 183 H 183
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 70
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 126
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 127 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 177
Query: 870 H 870
H
Sbjct: 178 H 178
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 49.3 bits (116), Expect = 9e-06, Method: Composition-based stats.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 27/191 (14%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI---NLKQKGASKSFVSECEALRNIRHR 762
+F +G+G+FG VY +VA+KV+ ++++G E E ++ H
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
N++++ F L+ EY G L L +S E R ++++ ++
Sbjct: 84 NILRLYNY-----FYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIME------EL 132
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSI 882
A A+ Y H ++H D+KP N+LL + DFG S H + KT
Sbjct: 133 ADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKT----- 180
Query: 883 GIKGTVGYVAP 893
+ GT+ Y+ P
Sbjct: 181 -MCGTLDYLPP 190
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 49.3 bits (116), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 40/179 (22%)
Query: 705 SEFSSSNMIGQGRFGTVYKGI-LGDDEMVVAVK----------VINLKQKGASKSFVSEC 753
+E + +IG G FG VY+ +GD+ V A + + N++Q E
Sbjct: 7 AELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQ---------EA 57
Query: 754 EALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLI 813
+ ++H N+I + +C LV E+ G L N + +++
Sbjct: 58 KLFAMLKHPNIIALRGVCLKEPN-----LCLVMEFARGGPL-------NRVLSGKRIPPD 105
Query: 814 QRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL-----DYDM---VAHVGDFGLAK 864
+N A+ +A + YLH P++H DLK SN+L+ + D+ + + DFGLA+
Sbjct: 106 ILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 16/168 (9%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNL 764
+++ + IG+G +G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
I I I + E + +V + ME L H SND + +
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI----------CYFLYQI 133
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHH 870
++Y+H ++H DLKPSN+LL+ + DFGLA+ H
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 178
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 22/165 (13%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHR 762
++ IG+G +GTV+K + +VA+K + L +G S + E L+ ++H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 763 NLIKIITICSSTDFEGVDFK-ALVFEYMENGSLEDWLHQSNDQV--EVRKLSLIQRMNIA 819
N++++ + S D K LVFE+ + L+ + N + E+ K L Q
Sbjct: 62 NIVRLHDVLHS------DKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQ----- 109
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + + H ++H DLKP N+L++ + + +FGLA+
Sbjct: 110 --LLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR 74
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 130
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 131 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 181
Query: 870 H 870
H
Sbjct: 182 H 182
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 9 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 68
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 124
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 125 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 175
Query: 870 H 870
H
Sbjct: 176 H 176
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 37/194 (19%)
Query: 700 LSKATSEFSSSNMI-----GQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGAS---KS 748
L EF N++ G+G FG V K L V V LK+ + +
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 749 FVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN------ 802
+SE L+ + H ++IK+ CS +G L+ EY + GSL +L +S
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQ---DGPLL--LIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 803 ------------DQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 850
D + R L++ ++ A ++ ++YL + +VH DL N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVA 184
Query: 851 YDMVAHVGDFGLAK 864
+ DFGL++
Sbjct: 185 EGRKMKISDFGLSR 198
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 33/191 (17%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIRHRNLIK 766
+G G+F V K + A K I +Q AS+ VS E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ + +E L+ E + G L D+L Q E S I++ + +
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDGV 128
Query: 827 EYLHHHCQPPMVHGDLKPSNV-LLDYDM-VAHVG--DFGLAKFLSNHHLDIASKTPSSSI 882
YLH + H DLKP N+ LLD ++ + H+ DFGLA H ++ + +
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN--- 177
Query: 883 GIKGTVGYVAP 893
I GT +VAP
Sbjct: 178 -IFGTPEFVAP 187
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 37/194 (19%)
Query: 700 LSKATSEFSSSNMI-----GQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGAS---KS 748
L EF N++ G+G FG V K L V V LK+ + +
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 749 FVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN------ 802
+SE L+ + H ++IK+ CS +G L+ EY + GSL +L +S
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQ---DGPLL--LIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 803 ------------DQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 850
D + R L++ ++ A ++ ++YL + +VH DL N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVA 184
Query: 851 YDMVAHVGDFGLAK 864
+ DFGL++
Sbjct: 185 EGRKMKISDFGLSR 198
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 37/194 (19%)
Query: 700 LSKATSEFSSSNMI-----GQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGAS---KS 748
L EF N++ G+G FG V K L V V LK+ + +
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 749 FVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN------ 802
+SE L+ + H ++IK+ CS +G L+ EY + GSL +L +S
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQ---DGPLL--LIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 803 ------------DQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 850
D + R L++ ++ A ++ ++YL + +VH DL N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVA 184
Query: 851 YDMVAHVGDFGLAK 864
+ DFGL++
Sbjct: 185 EGRKMKISDFGLSR 198
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 33/191 (17%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIRHRNLIK 766
+G G+F V K + A K I +Q AS+ VS E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ + +E L+ E + G L D+L Q E S I++ + +
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDGV 128
Query: 827 EYLHHHCQPPMVHGDLKPSNV-LLDYDM-VAHVG--DFGLAKFLSNHHLDIASKTPSSSI 882
YLH + H DLKP N+ LLD ++ + H+ DFGLA H ++ + +
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN--- 177
Query: 883 GIKGTVGYVAP 893
I GT +VAP
Sbjct: 178 -IFGTPEFVAP 187
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 33/191 (17%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIRHRNLIK 766
+G G+F V K + A K I +Q AS+ VS E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ + +E L+ E + G L D+L Q E S I++ + +
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDGV 128
Query: 827 EYLHHHCQPPMVHGDLKPSNV-LLDYDM-VAHVG--DFGLAKFLSNHHLDIASKTPSSSI 882
YLH + H DLKP N+ LLD ++ + H+ DFGLA H ++ + +
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN--- 177
Query: 883 GIKGTVGYVAP 893
I GT +VAP
Sbjct: 178 -IFGTPEFVAP 187
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 13 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 72
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 128
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 129 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 179
Query: 870 H 870
H
Sbjct: 180 H 180
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 26/146 (17%)
Query: 751 SECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKL 810
+E L+++ H N+IK+ + FE + LV E+ E G L + + + K
Sbjct: 95 NEISLLKSLDHPNIIKLFDV-----FEDKKYFYLVTEFYEGGELFEQI------INRHKF 143
Query: 811 SLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAKFLS 867
NI + S I YLH H +VH D+KP N+LL+ + + DFGL+ F S
Sbjct: 144 DECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS 200
Query: 868 NHHLDIASKTPSSSIGIKGTVGYVAP 893
+ + + GT Y+AP
Sbjct: 201 KDY-KLRDRL--------GTAYYIAP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 33/191 (17%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIRHRNLIK 766
+G G+F V K + A K I +Q AS+ VS E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ + +E L+ E + G L D+L Q E S I++ + +
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDGV 128
Query: 827 EYLHHHCQPPMVHGDLKPSNV-LLDYDM-VAHVG--DFGLAKFLSNHHLDIASKTPSSSI 882
YLH + H DLKP N+ LLD ++ + H+ DFGLA H ++ + +
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN--- 177
Query: 883 GIKGTVGYVAP 893
I GT +VAP
Sbjct: 178 -IFGTPEFVAP 187
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 713 IGQGRFGTVYKGI--LGDDEMVVAVKVINL-KQKGASKSFVSECEALRNIRHRNLIKIIT 769
+G G FG+V +G+ + ++ VA+KV+ +K ++ + E + + + + ++++I
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 770 ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYL 829
+C + LV E G L +L +++ V ++ + V+ ++YL
Sbjct: 78 VCQAEAL------MLVMEMAGGGPLHKFLVGKREEIPVSNVA-----ELLHQVSMGMKYL 126
Query: 830 HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ VH DL NVLL A + DFGL+K L
Sbjct: 127 E---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 21/164 (12%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRHR 762
++ IG+G +G VYK E A+K I L+++ G + + E L+ ++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGE-TFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE--VRKLSLIQRMNIAI 820
N++K+ + + LVFE+++ L+ L +E K L+Q +N
Sbjct: 61 NIVKLYDVIHTKKR-----LVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLN--- 111
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
I Y H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 ----GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 82/190 (43%), Gaps = 28/190 (14%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK 766
F + +G+G VY+ + A+KV LK+ K +E L + H N+IK
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKV--LKKTVDKKIVRTEIGVLLRLSHPNIIK 112
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ I FE +LV E + G L D + + E +++ + A+
Sbjct: 113 LKEI-----FETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ------ILEAV 161
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDY---DMVAHVGDFGLAKFLSNHHLDIASKTPSSSIG 883
YLH + +VH DLKP N+L D + DFGL+K + + L KT
Sbjct: 162 AYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL---MKT------ 209
Query: 884 IKGTVGYVAP 893
+ GT GY AP
Sbjct: 210 VCGTPGYCAP 219
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 21/164 (12%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRHR 762
++ IG+G +G VYK E A+K I L+++ G + + E L+ ++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGE-TFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE--VRKLSLIQRMNIAI 820
N++K+ + + LVFE+++ L+ L +E K L+Q +N
Sbjct: 61 NIVKLYDVIHTKKR-----LVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLN--- 111
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
I Y H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 ----GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 19/161 (11%)
Query: 708 SSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKI 767
S + ++G GRFG V+K + +A K+I + + +E + + H NLI++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWL-HQSNDQVEVRKLSLIQRMNIAIDVASAI 826
FE + LV EY++ G L D + +S + E+ + +++ + I
Sbjct: 152 YDA-----FESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ------ICEGI 200
Query: 827 EYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDFGLAK 864
++H Q ++H DLKP N+L D + + DFGLA+
Sbjct: 201 RHMH---QMYILHLDLKPENILCVNRDAKQIK-IIDFGLAR 237
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA++ I+ + + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR 74
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 130
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 131 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
Query: 870 H 870
H
Sbjct: 182 H 182
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 21/164 (12%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRHR 762
++ IG+G +G VYK E A+K I L+++ G + + E L+ ++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGE-TFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE--VRKLSLIQRMNIAI 820
N++K+ + + LVFE+++ L+ L +E K L+Q +N
Sbjct: 61 NIVKLYDVIHTKKR-----LVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLN--- 111
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
I Y H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 ----GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 13 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 72
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENG--SLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + +V + ME L H SND +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI---- 128
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 129 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPD 179
Query: 870 H 870
H
Sbjct: 180 H 180
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 688 MEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK 747
+E++ P Y + T E +G G FGTV KG ++V V V LK +
Sbjct: 3 LEEIRPKEVYLDRKLLTLE---DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP 59
Query: 748 SF----VSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSND 803
+ ++E ++ + + ++++I IC + + LV E E G L +L Q+
Sbjct: 60 ALKDELLAEANVMQQLDNPYIVRMIGICEAESW------MLVMEMAELGPLNKYLQQNRH 113
Query: 804 QVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
+ + L+ + V+ ++YL + VH DL NVLL A + DFGL+
Sbjct: 114 VKDKNIIELVHQ------VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLS 164
Query: 864 KFL 866
K L
Sbjct: 165 KAL 167
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 17/144 (11%)
Query: 709 SSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFV-SECEALRNIR-HRNLIK 766
+S ++G+G + V + + AVK+I KQ G S+S V E E L + ++N+++
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIE-KQAGHSRSRVFREVETLYQCQGNKNILE 75
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+I FE LVFE ++ GS+ + Q R+ S + R DVA+A+
Sbjct: 76 LIEF-----FEDDTRFYLVFEKLQGGSILAHI-QKQKHFNEREASRVVR-----DVAAAL 124
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLD 850
++LH + H DLKP N+L +
Sbjct: 125 DFLH---TKGIAHRDLKPENILCE 145
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 26/180 (14%)
Query: 706 EFSSSNM-----IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGAS---KSFVSECE 754
EF +N+ +G G FG V + LG ++ V+ V V LK + ++ +SE +
Sbjct: 34 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 93
Query: 755 ALRNI-RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN----DQVEVRK 809
+ ++ +H N++ ++ C+ V + EY G L ++L + D+ + R
Sbjct: 94 IMSHLGQHENIVNLLGACTHGGPVLV-----ITEYCCYGDLLNFLRRKAEADLDKEDGRP 148
Query: 810 LSLIQRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
L L ++ + VA + +L +C +H D+ NVLL VA +GDFGLA+ + N
Sbjct: 149 LELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMN 204
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSF----VSECEALRNIRHRNLIKII 768
+G G FGTV KG ++V V V LK + + ++E ++ + + ++++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
IC + + LV E E G L +L Q+ + + L+ + V+ ++Y
Sbjct: 95 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKY 142
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
L + VH DL NVLL A + DFGL+K L
Sbjct: 143 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSF----VSECEALRNIRHRNLIKII 768
+G G FGTV KG ++V V V LK + + ++E ++ + + ++++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
IC + + LV E E G L +L Q+ + + L+ + V+ ++Y
Sbjct: 95 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKY 142
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
L + VH DL NVLL A + DFGL+K L
Sbjct: 143 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSF----VSECEALRNIRHRNLIKII 768
+G G FGTV KG ++V V V LK + + ++E ++ + + ++++I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
IC + + LV E E G L +L Q+ + + L+ + V+ ++Y
Sbjct: 73 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKY 120
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
L + VH DL NVLL A + DFGL+K L
Sbjct: 121 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 155
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSF----VSECEALRNIRHRNLIKII 768
+G G FGTV KG ++V V V LK + + ++E ++ + + ++++I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
IC + + LV E E G L +L Q+ + + L+ + V+ ++Y
Sbjct: 75 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKY 122
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
L + VH DL NVLL A + DFGL+K L
Sbjct: 123 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 157
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSF----VSECEALRNIRHRNLIKII 768
+G G FGTV KG ++V V V LK + + ++E ++ + + ++++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
IC + + LV E E G L +L Q+ + + L+ + V+ ++Y
Sbjct: 79 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKY 126
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
L + VH DL NVLL A + DFGL+K L
Sbjct: 127 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSF----VSECEALRNIRHRNLIKII 768
+G G FGTV KG ++V V V LK + + ++E ++ + + ++++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
IC + + LV E E G L +L Q+ + + L+ + V+ ++Y
Sbjct: 79 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKY 126
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
L + VH DL NVLL A + DFGL+K L
Sbjct: 127 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 713 IGQGRFGTVYKGIL-----GDDEMVVAVKVINLKQKGA-SKSFVSECEALRNIRHRNLIK 766
+G+ RFG VYKG L G+ VA+K + K +G + F E ++H N++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWL----------HQSNDQVEVRKLSLIQRM 816
++ + + +++F Y +G L ++L +D+ L +
Sbjct: 94 LLGVVTKD-----QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++ +A+ +EYL H +VH DL NVL+ + + D GL +
Sbjct: 149 HLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFR 193
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 88/193 (45%), Gaps = 18/193 (9%)
Query: 674 RKRRSTHKSVDTSPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVV 733
++R+ H S T+ M + P + + + ++IG G +G V + ++ VV
Sbjct: 28 QQRKQHHSSKPTASMPR--PHSDW----QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVV 81
Query: 734 AVKVI--NLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMEN 791
A+K I + K + E L + H +++K++ I D E D +V E ++
Sbjct: 82 AIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADS 141
Query: 792 GSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY 851
D+ V + +L + + ++ ++Y+H ++H DLKP+N L++
Sbjct: 142 ----DFKKLFRTPVYLTELHI---KTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQ 191
Query: 852 DMVAHVGDFGLAK 864
D V DFGLA+
Sbjct: 192 DCSVKVCDFGLAR 204
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 19/187 (10%)
Query: 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ------KGASKSFVSECE 754
+K ++ +++G+G +G V K +L D E + V LK+ + E +
Sbjct: 1 AKLIGKYLMGDLLGEGSYGKV-KEVL-DSETLCRRAVKILKKKKLRRIPNGEANVKKEIQ 58
Query: 755 ALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQ 814
LR +RH+N+I+++ + + + + + +V EY G + + D V ++ + Q
Sbjct: 59 LLRRLRHKNVIQLVDVLYNEEKQKM---YMVMEYCVCG-----MQEMLDSVPEKRFPVCQ 110
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874
+ +EYLH +VH D+KP N+LL + G+A+ L D
Sbjct: 111 AHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDT 167
Query: 875 SKTPSSS 881
+T S
Sbjct: 168 CRTSQGS 174
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI- 759
S+ T+EF IG G FG+V+K + D + A+K + K V E ALR +
Sbjct: 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 62
Query: 760 ------RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLI 813
+H ++++ + + D + EY GSL D + ++ + K + +
Sbjct: 63 AHAVLGQHSHVVRYFSAWAEDDHMLIQ-----NEYCNGGSLADAISENYRIMSYFKEAEL 117
Query: 814 QRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 849
+ ++ + V + Y+H +VH D+KPSN+ +
Sbjct: 118 K--DLLLQVGRGLRYIHSM---SLVHMDIKPSNIFI 148
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI- 759
S+ T+EF IG G FG+V+K + D + A+K + K V E ALR +
Sbjct: 3 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 58
Query: 760 ------RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLI 813
+H ++++ + + D + EY GSL D + ++ + K + +
Sbjct: 59 AHAVLGQHSHVVRYFSAWAEDDHMLIQ-----NEYCNGGSLADAISENYRIMSYFKEAEL 113
Query: 814 QRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 849
+ ++ + V + Y+H +VH D+KPSN+ +
Sbjct: 114 K--DLLLQVGRGLRYIHSM---SLVHMDIKPSNIFI 144
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI- 759
S+ T+EF IG G FG+V+K + D + A+K + K V E ALR +
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 60
Query: 760 ------RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLI 813
+H ++++ + + D + EY GSL D + ++ + K + +
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDHMLIQ-----NEYCNGGSLADAISENYRIMSYFKEAEL 115
Query: 814 QRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 849
+ ++ + V + Y+H +VH D+KPSN+ +
Sbjct: 116 K--DLLLQVGRGLRYIHSM---SLVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI- 759
S+ T+EF IG G FG+V+K + D + A+K + K V E ALR +
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 60
Query: 760 ------RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLI 813
+H ++++ + + D + EY GSL D + ++ + K + +
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDHMLIQ-----NEYCNGGSLADAISENYRIMSYFKEAEL 115
Query: 814 QRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 849
+ ++ + V + Y+H +VH D+KPSN+ +
Sbjct: 116 K--DLLLQVGRGLRYIHSM---SLVHMDIKPSNIFI 146
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 39/185 (21%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---------------------- 742
++++ + IG+G +G V +D A+KV++ K+
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 743 ----KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWL 798
+G + E L+ + H N++K++ + D D +VFE + G +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVL---DDPNEDHLYMVFELVNQGPV---- 125
Query: 799 HQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858
+ ++ LS Q D+ IEYLH+ ++H D+KPSN+L+ D +
Sbjct: 126 ---MEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIA 179
Query: 859 DFGLA 863
DFG++
Sbjct: 180 DFGVS 184
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+G G FG VYK + ++ A KVI+ K + + ++ E + L + H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA-- 102
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
F + ++ E+ G+++ + + R L+ Q + A+ YLH +
Sbjct: 103 ---FYYENNLWILIEFCAGGAVDAVMLELE-----RPLTESQIQVVCKQTLDALNYLHDN 154
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
++H DLK N+L D + DFG++
Sbjct: 155 ---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 37/200 (18%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN--------LKQKGASKSFVSECEALR 757
E+ S +G G G V VA+K+I+ ++ + + +E E L+
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 76
Query: 758 NIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVR-KLSLIQRM 816
+ H +IKI + D+ +V E ME G L D + + E KL Q +
Sbjct: 77 KLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 130
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDFGLAKFLSNHHLDI 873
A++YLH + ++H DLKP NVLL + D + + DFG +K L L
Sbjct: 131 -------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-- 178
Query: 874 ASKTPSSSIGIKGTVGYVAP 893
+T + GT Y+AP
Sbjct: 179 -MRT------LCGTPTYLAP 191
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 37/200 (18%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN--------LKQKGASKSFVSECEALR 757
E+ S +G G G V VA+K+I+ ++ + + +E E L+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 758 NIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVR-KLSLIQRM 816
+ H +IKI + D+ +V E ME G L D + + E KL Q +
Sbjct: 71 KLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDFGLAKFLSNHHLDI 873
A++YLH + ++H DLKP NVLL + D + + DFG +K L L
Sbjct: 125 -------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-- 172
Query: 874 ASKTPSSSIGIKGTVGYVAP 893
+T + GT Y+AP
Sbjct: 173 -MRT------LCGTPTYLAP 185
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+G G FG VYK + ++ A KVI+ K + + ++ E + L + H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA-- 102
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
F + ++ E+ G+++ + + R L+ Q + A+ YLH +
Sbjct: 103 ---FYYENNLWILIEFCAGGAVDAVMLELE-----RPLTESQIQVVCKQTLDALNYLHDN 154
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
++H DLK N+L D + DFG++
Sbjct: 155 ---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 37/200 (18%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN--------LKQKGASKSFVSECEALR 757
E+ S +G G G V VA+K+I+ ++ + + +E E L+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 758 NIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVR-KLSLIQRM 816
+ H +IKI + D+ +V E ME G L D + + E KL Q +
Sbjct: 71 KLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDFGLAKFLSNHHLDI 873
A++YLH + ++H DLKP NVLL + D + + DFG +K L L
Sbjct: 125 -------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-- 172
Query: 874 ASKTPSSSIGIKGTVGYVAP 893
+T + GT Y+AP
Sbjct: 173 -MRT------LCGTPTYLAP 185
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 26/180 (14%)
Query: 706 EFSSSNM-----IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGAS---KSFVSECE 754
EF +N+ +G G FG V + LG ++ V+ V V LK + ++ +SE +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 755 ALRNI-RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN----DQVEVRK 809
+ ++ +H N++ ++ C+ V + EY G L ++L + D+ + R
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLV-----ITEYCCYGDLLNFLRRKAEADLDKEDGRP 156
Query: 810 LSLIQRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
L L ++ + VA + +L +C +H D+ NVLL VA +GDFGLA+ + N
Sbjct: 157 LELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMN 212
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 37/200 (18%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN--------LKQKGASKSFVSECEALR 757
E+ S +G G G V VA+K+I+ ++ + + +E E L+
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 69
Query: 758 NIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVR-KLSLIQRM 816
+ H +IKI + D+ +V E ME G L D + + E KL Q +
Sbjct: 70 KLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 123
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDFGLAKFLSNHHLDI 873
A++YLH + ++H DLKP NVLL + D + + DFG +K L L
Sbjct: 124 -------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-- 171
Query: 874 ASKTPSSSIGIKGTVGYVAP 893
+T + GT Y+AP
Sbjct: 172 -MRT------LCGTPTYLAP 184
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+G G FG VYK + ++ A KVI+ K + + ++ E + L + H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA-- 102
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
F + ++ E+ G+++ + + R L+ Q + A+ YLH +
Sbjct: 103 ---FYYENNLWILIEFCAGGAVDAVMLELE-----RPLTESQIQVVCKQTLDALNYLHDN 154
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
++H DLK N+L D + DFG++
Sbjct: 155 ---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 84/200 (42%), Gaps = 37/200 (18%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN--------LKQKGASKSFVSECEALR 757
E+ S +G G G V VA+K+I+ ++ + + +E E L+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 758 NIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVR-KLSLIQRM 816
+ H +IKI + D+ +V E ME G L D + + E KL Q +
Sbjct: 71 KLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDFGLAKFLSNHHLDI 873
A++YLH + ++H DLKP NVLL + D + + DFG +K L L
Sbjct: 125 -------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-- 172
Query: 874 ASKTPSSSIGIKGTVGYVAP 893
+ GT Y+AP
Sbjct: 173 -------MRTLCGTPTYLAP 185
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 54/195 (27%), Positives = 81/195 (41%), Gaps = 27/195 (13%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRH 761
T E+ IG+G F V + + A K+IN K+ A + E R ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 762 RNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821
N++++ S EG F LVF+ + G L + + E IQ++ A+
Sbjct: 63 SNIVRL---HDSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV- 116
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAKFLSNHHLDIASKTP 878
LH H Q +VH DLKP N+LL + DFGLA +
Sbjct: 117 -------LHCH-QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-------- 160
Query: 879 SSSIGIKGTVGYVAP 893
+ G GT GY++P
Sbjct: 161 QAWFGFAGTPGYLSP 175
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMV---VAVKVINLK---QKGASKSFVSECEALRNI 759
+F ++G+G FG V IL ++ A+K++ + K V+E L+N
Sbjct: 6 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH L + F+ D V EY G L + H S ++V + +
Sbjct: 63 RHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----YG 111
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
IG+G G V + +VAVK ++L+++ + +E +R+ +H N++++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 83
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+ D +V E++E G+L D + + E Q + + V A+ LH
Sbjct: 84 -NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQ 135
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
++H D+K ++LL +D + DFG +S
Sbjct: 136 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 167
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
IG+G G V + +VAVK ++L+++ + +E +R+ +H N++++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 87
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+ D +V E++E G+L D + + E Q + + V A+ LH
Sbjct: 88 -NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQ 139
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
++H D+K ++LL +D + DFG +S
Sbjct: 140 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 171
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
IG+G G V + +VAVK ++L+++ + +E +R+ +H N++++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 92
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+ D +V E++E G+L D + + E Q + + V A+ LH
Sbjct: 93 -NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQ 144
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
++H D+K ++LL +D + DFG +S
Sbjct: 145 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 176
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
IG+G G V + +VAVK ++L+++ + +E +R+ +H N++++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 94
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+ D +V E++E G+L D + + E Q + + V A+ LH
Sbjct: 95 -NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQ 146
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867
++H D+K ++LL +D + DFG +S
Sbjct: 147 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 178
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 82/191 (42%), Gaps = 33/191 (17%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFV------SECEALRNIRHRNLIK 766
+G G+F V K + A K I +Q AS+ V E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ + +E L+ E + G L D+L Q E S I++ + +
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDGV 128
Query: 827 EYLHHHCQPPMVHGDLKPSNV-LLDYDM-VAHVG--DFGLAKFLSNHHLDIASKTPSSSI 882
YLH + H DLKP N+ LLD ++ + H+ DFGLA H ++ + +
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN--- 177
Query: 883 GIKGTVGYVAP 893
I GT +VAP
Sbjct: 178 -IFGTPEFVAP 187
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMV---VAVKVINLK---QKGASKSFVSECEALRNI 759
+F ++G+G FG V IL ++ A+K++ + K V+E L+N
Sbjct: 9 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 65
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH L + F+ D V EY G L + H S ++V + +
Sbjct: 66 RHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----YG 114
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 115 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMV---VAVKVINLK---QKGASKSFVSECEALRNI 759
+F ++G+G FG V IL ++ A+K++ + K V+E L+N
Sbjct: 6 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH L + F+ D V EY G L + H S ++V + +
Sbjct: 63 RHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----YG 111
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 16/181 (8%)
Query: 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVS 751
P + ++ +++ + IG+G +G V +++ VA+K I+ + + + +
Sbjct: 31 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 90
Query: 752 ECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYM--ENGSLEDWLHQSNDQVEVRK 809
E + L RH N+I I I + E + LV M + L H SND +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHI---- 146
Query: 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+ ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 147 ------CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 197
Query: 870 H 870
H
Sbjct: 198 H 198
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 712 MIGQ-GRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITI 770
+IG+ G FG VYK + ++ A KVI+ K + + ++ E + L + H N++K++
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
F + ++ E+ G+++ + + R L+ Q + A+ YLH
Sbjct: 76 -----FYYENNLWILIEFCAGGAVDAVMLELE-----RPLTESQIQVVCKQTLDALNYLH 125
Query: 831 HHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
+ ++H DLK N+L D + DFG++
Sbjct: 126 DN---KIIHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 37/201 (18%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN--------LKQKGASKSFVSECEAL 756
E+ S +G G G V VA+++I+ ++ + + +E E L
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 757 RNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVR-KLSLIQR 815
+ + H +IKI + D+ +V E ME G L D + + E KL Q
Sbjct: 209 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 262
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDFGLAKFLSNHHLD 872
+ A++YLH + ++H DLKP NVLL + D + + DFG +K L L
Sbjct: 263 L-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 311
Query: 873 IASKTPSSSIGIKGTVGYVAP 893
+ GT Y+AP
Sbjct: 312 --------MRTLCGTPTYLAP 324
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 16/167 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN-LKQKGASKSFVSECEALRNIRHRNLI 765
++ IG+G +G V + VA+K I+ + + + + E + L RH N+I
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQ--SNDQVEVRKLSLIQRMNIAIDVA 823
I I ++ E + +V + ME + Q SND + +
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHI----------CYFLYQIL 154
Query: 824 SAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHH 870
++Y+H ++H DLKPSN+L++ + DFGLA+ H
Sbjct: 155 RGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEH 198
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 29/197 (14%)
Query: 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI--NLKQKGASKSFVSECEALRNI 759
+ + +G+G F Y+ D + V A KV+ ++ K K +S A+
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI--- 95
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
H++L + FE DF +V E SL + LH+ V + R I
Sbjct: 96 -HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI- 152
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA---KFLSNHHLDIASK 876
++YLH++ ++H DLK N+ L+ DM +GDFGLA +F D+
Sbjct: 153 ----QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC-- 203
Query: 877 TPSSSIGIKGTVGYVAP 893
GT Y+AP
Sbjct: 204 ---------GTPNYIAP 211
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY--- 70
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 71 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 121
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MXGTLPY 172
Query: 891 VAP 893
VAP
Sbjct: 173 VAP 175
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY--- 71
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 72 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 122
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MXGTLPY 173
Query: 891 VAP 893
VAP
Sbjct: 174 VAP 176
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMV---VAVKVINLK---QKGASKSFVSECEALRNI 759
+F ++G+G FG V IL ++ A+K++ + K V+E L+N
Sbjct: 6 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH L + F+ D V EY G L + H S ++V + +
Sbjct: 63 RHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----YG 111
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMV---VAVKVINLK---QKGASKSFVSECEALRNI 759
+F ++G+G FG V IL ++ A+K++ + K V+E L+N
Sbjct: 6 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH L + F+ D V EY G L + H S ++V + +
Sbjct: 63 RHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----YG 111
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
IG+G G V + +VAVK ++L+++ + +E +R+ +H N++++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 214
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+ D +V E++E G+L D + + +++ Q + + V A+ LH
Sbjct: 215 -NSYLVGDELWVVMEFLEGGALTDIVTHT-------RMNEEQIAAVCLAVLQALSVLHAQ 266
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
++H D+K ++LL +D + DFG +S
Sbjct: 267 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 37/201 (18%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN--------LKQKGASKSFVSECEAL 756
E+ S +G G G V VA+++I+ ++ + + +E E L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 757 RNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVR-KLSLIQR 815
+ + H +IKI + D+ +V E ME G L D + + E KL Q
Sbjct: 195 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDFGLAKFLSNHHLD 872
+ A++YLH + ++H DLKP NVLL + D + + DFG +K L L
Sbjct: 249 L-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 297
Query: 873 IASKTPSSSIGIKGTVGYVAP 893
+ GT Y+AP
Sbjct: 298 --------MRTLCGTPTYLAP 310
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIR 760
+ + +G G+F V K + A K I ++ +S+ VS E L+ I+
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N+I + + +E L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ----- 122
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNV-LLDYDMVA---HVGDFGLAKFLSNHHLDIASK 876
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D ++
Sbjct: 123 -ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNE 173
Query: 877 TPSSSIGIKGTVGYVAP 893
+ I GT +VAP
Sbjct: 174 FKN----IFGTPEFVAP 186
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNL 764
+S IG G V++ +L + + + A+K +NL++ S+ +E L ++ +
Sbjct: 14 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 71
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLE--DWLHQSNDQVEVRKLSLIQRMNIAIDV 822
KII + D+E D ++ ME G+++ WL + + + +R + ++
Sbjct: 72 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKK------KSIDPWERKSYWKNM 120
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSI 882
A+ +H H +VH DLKP+N L+ D + + DFG+A + D S S +
Sbjct: 121 LEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQP---DTTSVVKDSQV 173
Query: 883 GIKGTVGYVAP 893
GTV Y+ P
Sbjct: 174 ---GTVNYMPP 181
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 38/197 (19%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRN- 763
+F +G G FG V+ + A+KV+ K V L+ + H N
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVL-------KKEIVVR---LKQVEHTND 55
Query: 764 ---LIKIIT----ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRM 816
++ I+T I F+ ++ +Y+E G L L +S R + + +
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ-----RFPNPVAKF 110
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASK 876
A +V A+EYLH +++ DLKP N+LLD + + DFG AK++
Sbjct: 111 -YAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYV---------- 156
Query: 877 TPSSSIGIKGTVGYVAP 893
P + + GT Y+AP
Sbjct: 157 -PDVTYXLCGTPDYIAP 172
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
IG+G G V + +VAVK ++L+++ + +E +R+ +H N++++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
D V V E++E G+L D + + +++ Q + + V A+ LH
Sbjct: 142 VGDELWV-----VMEFLEGGALTDIVTHT-------RMNEEQIAAVCLAVLQALSVLHAQ 189
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
++H D+K ++LL +D + DFG +S
Sbjct: 190 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 28/198 (14%)
Query: 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRN 758
+K + + +G+G F V + + + A K+IN K+ A + E R
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
++H N++++ + F LVF+ + G L + + E IQ+
Sbjct: 62 LQHPNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ--- 113
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAKFLSNHHLDIAS 875
+ +I Y H + +VH +LKP N+LL + DFGLA I
Sbjct: 114 ---ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA---------IEV 158
Query: 876 KTPSSSIGIKGTVGYVAP 893
+ G GT GY++P
Sbjct: 159 NDSEAWHGFAGTPGYLSP 176
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 28/198 (14%)
Query: 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRN 758
+K + + +G+G F V + + + A K+IN K+ A + E R
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 60
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
++H N++++ + F LVF+ + G L + + E IQ+
Sbjct: 61 LQHPNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ--- 112
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAKFLSNHHLDIAS 875
+ +I Y H + +VH +LKP N+LL + DFGLA I
Sbjct: 113 ---ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA---------IEV 157
Query: 876 KTPSSSIGIKGTVGYVAP 893
+ G GT GY++P
Sbjct: 158 NDSEAWHGFAGTPGYLSP 175
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 28/198 (14%)
Query: 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRN 758
+K + + +G+G F V + + + A K+IN K+ A + E R
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
++H N++++ + F LVF+ + G L + + E IQ+
Sbjct: 62 LQHPNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ--- 113
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAKFLSNHHLDIAS 875
+ +I Y H + +VH +LKP N+LL + DFGLA I
Sbjct: 114 ---ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA---------IEV 158
Query: 876 KTPSSSIGIKGTVGYVAP 893
+ G GT GY++P
Sbjct: 159 NDSEAWHGFAGTPGYLSP 176
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI--NLKQKGASKSFVSECEALRNI 759
+ + +G+G F Y+ D + V A KV+ ++ K K +S A+
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI--- 95
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
H++L + FE DF +V E SL + LH+ V + R I
Sbjct: 96 -HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI- 152
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++YLH++ ++H DLK N+ L+ DM +GDFGLA + D K
Sbjct: 153 ----QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA---TKIEFDGERKK-- 200
Query: 880 SSIGIKGTVGYVAP 893
+ GT Y+AP
Sbjct: 201 ---XLCGTPNYIAP 211
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI--NLKQKGASKSFVSECEALRNI 759
+ + +G+G F Y+ D + V A KV+ ++ K K +S A+
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI--- 95
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
H++L + FE DF +V E SL + LH+ V + R I
Sbjct: 96 -HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI- 152
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
++YLH++ ++H DLK N+ L+ DM +GDFGLA + D K
Sbjct: 153 ----QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA---TKIEFDGERKK-- 200
Query: 880 SSIGIKGTVGYVAP 893
+ GT Y+AP
Sbjct: 201 ---TLCGTPNYIAP 211
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMV---VAVKVINLK---QKGASKSFVSECEALRN 758
++F ++G+G FG V IL ++ A+K++ + K V+E L+N
Sbjct: 10 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
RH L + F+ D V EY G L + H S ++V + +
Sbjct: 67 TRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----Y 115
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 116 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMV---VAVKVINLK---QKGASKSFVSECEALRNI 759
EF ++G+G FG V IL ++ A+K++ + K ++E L+N
Sbjct: 9 EFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 65
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH L + F+ D V EY G L + H S ++V S +
Sbjct: 66 RHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDRARFYG 114
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++ SA++YLH + +V+ DLK N++LD D + DFGL K
Sbjct: 115 AEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNL 764
+S IG G V++ +L + + + A+K +NL++ S+ +E L ++ +
Sbjct: 11 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 68
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLE--DWLHQSNDQVEVRKLSLIQRMNIAIDV 822
KII + D+E D ++ ME G+++ WL + + + +R + ++
Sbjct: 69 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKK------KSIDPWERKSYWKNM 117
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSI 882
A+ +H H +VH DLKP+N L+ D + + DFG+A + D S S +
Sbjct: 118 LEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQP---DTTSVVKDSQV 170
Query: 883 GIKGTVGYVAP 893
GTV Y+ P
Sbjct: 171 ---GTVNYMPP 178
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMV---VAVKVINLK---QKGASKSFVSECEALRN 758
++F ++G+G FG V IL ++ A+K++ + K V+E L+N
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
RH L + F+ D V EY G L + H S ++V + +
Sbjct: 62 TRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----Y 110
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIR 760
+ + +G G+F V K + A K I ++ +S+ VS E L+ I+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N+I + + +E L+ E + G L D+L + E +++
Sbjct: 72 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ----- 121
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNV-LLDYDMVA---HVGDFGLAKFLSNHHLDIASK 876
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D ++
Sbjct: 122 -ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNE 172
Query: 877 TPSSSIGIKGTVGYVAP 893
+ I GT +VAP
Sbjct: 173 FKN----IFGTPEFVAP 185
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIR 760
+ + +G G+F V K + A K I ++ +S+ VS E L+ I+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N+I + + +E L+ E + G L D+L + E +++
Sbjct: 72 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ----- 121
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNV-LLDYDMVA---HVGDFGLAKFLSNHHLDIASK 876
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D ++
Sbjct: 122 -ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNE 172
Query: 877 TPSSSIGIKGTVGYVAP 893
+ I GT +VAP
Sbjct: 173 FKN----IFGTPEFVAP 185
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIR 760
+ + +G G+F V K + A K I ++ +S+ VS E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N+I + + +E L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ----- 122
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNV-LLDYDMVA---HVGDFGLAKFLSNHHLDIASK 876
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D ++
Sbjct: 123 -ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNE 173
Query: 877 TPSSSIGIKGTVGYVAP 893
+ I GT +VAP
Sbjct: 174 FKN----IFGTPEFVAP 186
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIR 760
+ + +G G+F V K + A K I ++ +S+ VS E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N+I + + +E L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ----- 122
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNV-LLDYDMVA---HVGDFGLAKFLSNHHLDIASK 876
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D ++
Sbjct: 123 -ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNE 173
Query: 877 TPSSSIGIKGTVGYVAP 893
+ I GT +VAP
Sbjct: 174 FKN----IFGTPEFVAP 186
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 22/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS--ECEALRNIRHRNLIKIITI 770
IG+G FG +D +K IN+ + + + S E L N++H N+++
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY--- 88
Query: 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
FE +V +Y E G D + N Q V Q ++ + + A++++H
Sbjct: 89 --RESFEENGSLYIVMDYCEGG---DLFKRINAQKGVL-FQEDQILDWFVQICLALKHVH 142
Query: 831 HHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGY 890
++H D+K N+ L D +GDFG+A+ L N +++A GT Y
Sbjct: 143 DR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVL-NSTVELAR-------ACIGTPYY 191
Query: 891 VAP 893
++P
Sbjct: 192 LSP 194
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNL 764
+S IG G V++ +L + + + A+K +NL++ S+ +E L ++ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 87
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLE--DWLHQSNDQVEVRKLSLIQRMNIAIDV 822
KII + D+E D ++ ME G+++ WL + + + +R + ++
Sbjct: 88 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKK------KSIDPWERKSYWKNM 136
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSI 882
A+ +H H +VH DLKP+N L+ D + + DFG+A + D S S +
Sbjct: 137 LEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQP---DTTSVVKDSQV 189
Query: 883 GIKGTVGYVAP 893
GTV Y+ P
Sbjct: 190 ---GTVNYMPP 197
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMV---VAVKVINLK---QKGASKSFVSECEALRNI 759
EF ++G+G FG V IL ++ A+K++ + K ++E L+N
Sbjct: 10 EFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 66
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH L + F+ D V EY G L + H S ++V S +
Sbjct: 67 RHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDRARFYG 115
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++ SA++YLH + +V+ DLK N++LD D + DFGL K
Sbjct: 116 AEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIR 760
+ + +G G+F V K + A K I ++ +S+ VS E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N+I + + +E L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ----- 122
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNV-LLDYDMVA---HVGDFGLAKFLSNHHLDIASK 876
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D ++
Sbjct: 123 -ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNE 173
Query: 877 TPSSSIGIKGTVGYVAP 893
+ I GT +VAP
Sbjct: 174 FKN----IFGTPEFVAP 186
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 35/196 (17%)
Query: 707 FSSSNMIGQGRFGT-VYKGILGDDEMVVAVKVINLKQKGASKSFVS-ECEALRNI-RHRN 763
F +++G G GT VY+G+ D VAVK I + SF E + LR H N
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMF--DNRDVAVKRILPE----CFSFADREVQLLRESDEHPN 79
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN-DQVEVRKLSLIQRMNIAIDV 822
+I+ C+ D + F+ + E + +L++++ Q + + + ++L+Q+
Sbjct: 80 VIRYF--CTEKDRQ---FQYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQ------T 127
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDY-----DMVAHVGDFGLAKFLSNHHLDIASKT 877
S + +LH +VH DLKP N+L+ + A + DFGL K L+ + +
Sbjct: 128 TSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA-----VGRHS 179
Query: 878 PSSSIGIKGTVGYVAP 893
S G+ GT G++AP
Sbjct: 180 FSRRSGVPGTEGWIAP 195
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMV---VAVKVINLK---QKGASKSFVSECEALRNI 759
EF ++G+G FG V IL ++ A+K++ + K ++E L+N
Sbjct: 149 EFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 205
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH L + F+ D V EY G L + H S ++V S +
Sbjct: 206 RHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDRARFYG 254
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++ SA++YLH + +V+ DLK N++LD D + DFGL K
Sbjct: 255 AEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 297
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 33/191 (17%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIRHRNLIK 766
+G G+F V K A K I ++ +S+ VS E LR IRH N+I
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ I FE L+ E + G L D+L + E +++ + +
Sbjct: 80 LHDI-----FENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ------ILDGV 128
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAH----VGDFGLAKFLSNHHLDIASKTPSSSI 882
YLH + H DLKP N++L V + + DFG+A H ++ ++ +
Sbjct: 129 HYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA-----HKIEAGNEFKN--- 177
Query: 883 GIKGTVGYVAP 893
I GT +VAP
Sbjct: 178 -IFGTPEFVAP 187
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMV---VAVKVINLK---QKGASKSFVSECEALRNI 759
EF ++G+G FG V IL ++ A+K++ + K ++E L+N
Sbjct: 11 EFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 67
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH L + F+ D V EY G L + H S ++V S +
Sbjct: 68 RHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDRARFYG 116
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++ SA++YLH + +V+ DLK N++LD D + DFGL K
Sbjct: 117 AEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIR 760
+ + +G G+F V K + A K I ++ +S+ VS E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N+I + + +E L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ----- 122
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNV-LLDYDMVA---HVGDFGLAKFLSNHHLDIASK 876
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D ++
Sbjct: 123 -ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNE 173
Query: 877 TPSSSIGIKGTVGYVAP 893
+ I GT +VAP
Sbjct: 174 FKN----IFGTPEFVAP 186
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIR 760
+ + +G G+F V K + A K I ++ +S+ VS E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N+I + + +E L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ----- 122
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNV-LLDYDMVA---HVGDFGLAKFLSNHHLDIASK 876
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D ++
Sbjct: 123 -ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNE 173
Query: 877 TPSSSIGIKGTVGYVAP 893
+ I GT +VAP
Sbjct: 174 FKN----IFGTPEFVAP 186
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 14/110 (12%)
Query: 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+V EY++ +L D +H R + +I D A+ + H Q ++H D+K
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA------DACQALNFSH---QNGIIHRDVK 160
Query: 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
P+N+++ V DFG+A+ +++ + + + + + GT Y++P
Sbjct: 161 PANIMISATNAVKVMDFGIARAIAD-----SGNSVTQTAAVIGTAQYLSP 205
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMV---VAVKVINLK---QKGASKSFVSECEALRNI 759
EF ++G+G FG V IL ++ A+K++ + K ++E L+N
Sbjct: 152 EFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 208
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
RH L + F+ D V EY G L + H S ++V S +
Sbjct: 209 RHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDRARFYG 257
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++ SA++YLH + +V+ DLK N++LD D + DFGL K
Sbjct: 258 AEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 34/195 (17%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-----GASKSFVSECEALRNIRH 761
+ +G G +G V +L D++ + I + +K ++ + E L+ + H
Sbjct: 39 YQRVKKLGSGAYGEV---LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 762 RNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821
N++K+ FE LV E + G L D + + K + + I
Sbjct: 96 PNIMKLYDF-----FEDKRNYYLVMECYKGGELFDEI------IHRMKFNEVDAAVIIKQ 144
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
V S + YLH H +VH DLKP N+LL + D + + DFGL+ N K
Sbjct: 145 VLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ------KKM 195
Query: 879 SSSIGIKGTVGYVAP 893
+ GT Y+AP
Sbjct: 196 KERL---GTAYYIAP 207
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 33/191 (17%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIRHRNLIK 766
+G G+F V K A K I ++ +S+ VS E LR IRH N+I
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ I FE L+ E + G L D+L + E +++ + +
Sbjct: 73 LHDI-----FENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ------ILDGV 121
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAH----VGDFGLAKFLSNHHLDIASKTPSSSI 882
YLH + H DLKP N++L V + + DFG+A H ++ ++ +
Sbjct: 122 HYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA-----HKIEAGNEFKN--- 170
Query: 883 GIKGTVGYVAP 893
I GT +VAP
Sbjct: 171 -IFGTPEFVAP 180
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNL 764
+S IG G V++ +L + + + A+K +NL++ S+ +E L ++ +
Sbjct: 10 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 67
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLE--DWLHQSNDQVEVRKLSLIQRMNIAIDV 822
KII + D+E D ++ ME G+++ WL + + + +R + ++
Sbjct: 68 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKK------KSIDPWERKSYWKNM 116
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSI 882
A+ +H H +VH DLKP+N L+ D + + DFG+A + D S S +
Sbjct: 117 LEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQP---DTTSVVKDSQV 169
Query: 883 GIKGTVGYVAP 893
GTV Y+ P
Sbjct: 170 ---GTVNYMPP 177
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNL 764
+S IG G V++ +L + + + A+K +NL++ S+ +E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 115
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLE--DWLHQSNDQVEVRKLSLIQRMNIAIDV 822
KII + D+E D ++ ME G+++ WL + + + +R + ++
Sbjct: 116 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKK------KSIDPWERKSYWKNM 164
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSI 882
A+ +H H +VH DLKP+N L+ D + + DFG+A + D S S +
Sbjct: 165 LEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQM---QPDTTSVVKDSQV 217
Query: 883 GIKGTVGYVAP 893
GTV Y+ P
Sbjct: 218 ---GTVNYMPP 225
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHR----NLIKII 768
+G G FGTV KG ++V V V LK + + E A N+ + ++++I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
IC + + LV E E G L +L Q+ + + L+ + V+ ++Y
Sbjct: 437 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKY 484
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
L + VH DL NVLL A + DFGL+K L
Sbjct: 485 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHR----NLIKII 768
+G G FGTV KG ++V V V LK + + E A N+ + ++++I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
IC + + LV E E G L +L Q+ + + L+ + V+ ++Y
Sbjct: 438 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKY 485
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
L + VH DL NVLL A + DFGL+K L
Sbjct: 486 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 520
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY--- 70
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 71 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 121
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MCGTLPY 172
Query: 891 VAP 893
VAP
Sbjct: 173 VAP 175
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 30/195 (15%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFV----SECEALRNIRHR 762
F IG+G FG V D + + A+K +N KQK ++ V E + ++ + H
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMN-KQKCVERNEVRNVFKELQIMQGLEHP 75
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQS-NDQVEVRKLSLIQRMNIAID 821
L+ + F+ + +V + + G L L Q+ + + E KL + +
Sbjct: 76 FLVNLWY-----SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICE------- 123
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
+ A++YL + ++H D+KP N+LLD H+ DF +A L +
Sbjct: 124 LVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE---------TQI 171
Query: 882 IGIKGTVGYVAPGKF 896
+ GT Y+AP F
Sbjct: 172 TTMAGTKPYMAPEMF 186
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNL 764
+S IG G V++ +L + + + A+K +NL++ S+ +E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 115
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLE--DWLHQSNDQVEVRKLSLIQRMNIAIDV 822
KII + D+E D ++ ME G+++ WL + + + +R + ++
Sbjct: 116 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKK------KSIDPWERKSYWKNM 164
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSI 882
A+ +H H +VH DLKP+N L+ D + + DFG+A + D S S +
Sbjct: 165 LEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQP---DTTSVVKDSQV 217
Query: 883 GIKGTVGYVAP 893
GTV Y+ P
Sbjct: 218 ---GTVNYMPP 225
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 48/227 (21%)
Query: 699 ELSKATSEFSSSNMIGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGAS---KSFVSE 752
E + EF ++G G FG V + + + V V LK+K S ++ +SE
Sbjct: 41 EFPRENLEFG--KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSE 98
Query: 753 CEALRNI-RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQ-----SNDQVE 806
+ + + H N++ ++ C+ + G + L+FEY G L ++L S D++E
Sbjct: 99 LKMMTQLGSHENIVNLLGACTLS---GPIY--LIFEYCCYGDLLNYLRSKREKFSEDEIE 153
Query: 807 V---RKLSLIQRMNI---------AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV 854
++L + +N+ A VA +E+L VH DL NVL+ + V
Sbjct: 154 YENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKV 210
Query: 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGT----VGYVAPGKFF 897
+ DFGLA+ DI S S+ ++G V ++AP F
Sbjct: 211 VKICDFGLAR-------DIMS---DSNYVVRGNARLPVKWMAPESLF 247
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 71 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 121
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MXGTLPY 172
Query: 891 VAP 893
VAP
Sbjct: 173 VAP 175
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 71 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 121
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MXGTLPY 172
Query: 891 VAP 893
VAP
Sbjct: 173 VAP 175
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 71 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 121
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MXGTLPY 172
Query: 891 VAP 893
VAP
Sbjct: 173 VAP 175
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI--NLKQKGASKSFVSECEALRNIRHRN 763
E+ IG G +G V VA+K I +K + E + L++ +H N
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDN 115
Query: 764 LIKIITICSSTDFEGVDFKAL--VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821
+I I I T G +FK++ V + ME+ L +H S L+L
Sbjct: 116 IIAIKDILRPTVPYG-EFKSVYVVLDLMES-DLHQIIHSSQ------PLTLEHVRYFLYQ 167
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ ++Y+H ++H DLKPSN+L++ + +GDFG+A+ L
Sbjct: 168 LLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 209
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI--NLKQKGASKSFVSECEALRNIRHRN 763
E+ IG G +G V VA+K I +K + E + L++ +H N
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDN 114
Query: 764 LIKIITICSSTDFEGVDFKAL--VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821
+I I I T G +FK++ V + ME+ L +H S L+L
Sbjct: 115 IIAIKDILRPTVPYG-EFKSVYVVLDLMES-DLHQIIHSSQ------PLTLEHVRYFLYQ 166
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ ++Y+H ++H DLKPSN+L++ + +GDFG+A+ L
Sbjct: 167 LLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 712 MIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
++G+G +G VY G +++ +A+K I + S+ E ++++H+N+++ +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL--- 85
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
F F + E + GSL L ++ + ++ + ++YLH
Sbjct: 86 --GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTI---GFYTKQILEGLKYLHD 140
Query: 832 HCQPPMVHGDLKPSNVLLD-YDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGY 890
+ +VH D+K NVL++ Y V + DFG +K L A P + GT+ Y
Sbjct: 141 N---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-------AGINPCTET-FTGTLQY 189
Query: 891 VAP 893
+AP
Sbjct: 190 MAP 192
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 23/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
IG+G G V VAVK ++L+++ + +E +R+ H N++ +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMY---- 108
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
S+ G D +V E++E G+L D + + E Q + + V A+ YLH+
Sbjct: 109 SSYLVG-DELWVVMEFLEGGALTDIVTHTRMNEE-------QIATVCLSVLRALSYLHNQ 160
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
++H D+K ++LL D + DFG ++ + P + GT ++A
Sbjct: 161 G---VIHRDIKSDSILLTSDGRIKLSDFGFCA-------QVSKEVPKRKXLV-GTPYWMA 209
Query: 893 P 893
P
Sbjct: 210 P 210
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 713 IGQGRFGTVYKGI--LGDDEMVVAVKVINL-KQKGASKSFVSECEALRNIRHRNLIKIIT 769
+G G FG+V +G+ + ++ VA+KV+ +K ++ + E + + + + ++++I
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 770 ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYL 829
+C + LV E G L +L +++ V ++ + V+ ++YL
Sbjct: 404 VCQAEAL------MLVMEMAGGGPLHKFLVGKREEIPVSNVA-----ELLHQVSMGMKYL 452
Query: 830 HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866
+ VH +L NVLL A + DFGL+K L
Sbjct: 453 E---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 712 MIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
++G+G +G VY G +++ +A+K I + S+ E ++++H+N+++ +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
S F + E + GSL L ++ + ++ + ++YLH
Sbjct: 75 SEN-----GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTI---GFYTKQILEGLKYLHD 126
Query: 832 HCQPPMVHGDLKPSNVLLD-YDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGY 890
+ +VH D+K NVL++ Y V + DFG +K L A P + GT+ Y
Sbjct: 127 N---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-------AGINPCTET-FTGTLQY 175
Query: 891 VAP 893
+AP
Sbjct: 176 MAP 178
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 29/197 (14%)
Query: 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVI--NLKQKGASKSFVSECEALRNI 759
+ + +G+G F Y+ D + V A KV+ ++ K K +S A+
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI--- 79
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
H++L + FE DF +V E SL + LH+ V + R I
Sbjct: 80 -HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI- 136
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA---KFLSNHHLDIASK 876
++YLH++ ++H DLK N+ L+ DM +GDFGLA +F D+
Sbjct: 137 ----QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC-- 187
Query: 877 TPSSSIGIKGTVGYVAP 893
GT Y+AP
Sbjct: 188 ---------GTPNYIAP 195
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 28/198 (14%)
Query: 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRN 758
+K + + +G+G F V + + + A K+IN K+ A + E R
Sbjct: 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 84
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
++H N++++ + F LVF+ + G L + + E IQ+
Sbjct: 85 LQHPNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ--- 136
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAKFLSNHHLDIAS 875
+ +I Y H + +VH +LKP N+LL + DFGLA I
Sbjct: 137 ---ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA---------IEV 181
Query: 876 KTPSSSIGIKGTVGYVAP 893
+ G GT GY++P
Sbjct: 182 NDSEAWHGFAGTPGYLSP 199
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 33/191 (17%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIRHRNLIK 766
+G G+F V K A K I ++ +S+ VS E LR IRH N+I
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+ I FE L+ E + G L D+L + E +++ + +
Sbjct: 94 LHDI-----FENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ------ILDGV 142
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAH----VGDFGLAKFLSNHHLDIASKTPSSSI 882
YLH + H DLKP N++L V + + DFG+A H ++ ++ +
Sbjct: 143 HYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA-----HKIEAGNEFKN--- 191
Query: 883 GIKGTVGYVAP 893
I GT +VAP
Sbjct: 192 -IFGTPEFVAP 201
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 20/159 (12%)
Query: 709 SSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFV-SECEALRNIR-HRNLIK 766
+++G+G V I AVK+I KQ G +S V E E L + HRN+++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQCQGHRNVLE 75
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+I D LVFE M GS+ +H+ E+ ++Q DVASA+
Sbjct: 76 LIEFFEEEDR-----FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ------DVASAL 124
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDY-DMVAHVG--DFGL 862
++LH+ + H DLKP N+L ++ + V+ V DFGL
Sbjct: 125 DFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGL 160
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 29/214 (13%)
Query: 687 PMEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ 742
PM + P EL+K E + + + +G G +G+V + VAVK ++
Sbjct: 2 PMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 61
Query: 743 KGA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLH 799
+ +K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 62 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------ 113
Query: 800 QSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + D
Sbjct: 114 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 170
Query: 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
FGLA+ T G T Y AP
Sbjct: 171 FGLAR-----------HTDDEMTGYVATRWYRAP 193
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 29/195 (14%)
Query: 705 SEFSSSNMIGQGRFGTVY--KGILGDD-EMVVAVKVI---NLKQKGASKSFVSECEALRN 758
S+F ++GQG FG V+ K I G D + A+KV+ LK + ++ + E + L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVE 82
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+ H ++K+ F+ L+ +++ G L L + EV + +
Sbjct: 83 VNHPFIVKL-----HYAFQTEGKLYLILDFLRGGDLFTRLSK-----EVMFTEEDVKFYL 132
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A ++A A+++LH +++ DLKP N+LLD + + DFGL+K +H
Sbjct: 133 A-ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-------- 180
Query: 879 SSSIGIKGTVGYVAP 893
+ GTV Y+AP
Sbjct: 181 KKAYSFCGTVEYMAP 195
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 27/195 (13%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRH 761
T E+ +G+G F V + + A K+IN K+ A + E R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 762 RNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821
N++++ S EG F LVF+ + G L + + E IQ++
Sbjct: 63 PNIVRL---HDSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI----- 112
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
+E ++H +VH DLKP N+LL + DFGLA +
Sbjct: 113 ----LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-------- 160
Query: 879 SSSIGIKGTVGYVAP 893
+ G GT GY++P
Sbjct: 161 QAWFGFAGTPGYLSP 175
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 33/197 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIR 760
+ + +G G F V K + A K I ++ +S+ VS E L+ I+
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N+I + + +E L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ----- 122
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNV-LLDYDMVA---HVGDFGLAKFLSNHHLDIASK 876
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D ++
Sbjct: 123 -ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNE 173
Query: 877 TPSSSIGIKGTVGYVAP 893
+ I GT +VAP
Sbjct: 174 FKN----IFGTPEFVAP 186
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIR 760
+ + +G G+F V K + A K I ++ +S+ VS E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N+I + + +E L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEV-----YENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQ----- 122
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNV-LLDYDMVA---HVGDFGLAKFLSNHHLDIASK 876
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D ++
Sbjct: 123 -ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNE 173
Query: 877 TPSSSIGIKGTVGYVAP 893
+ I GT +VAP
Sbjct: 174 FKN----IFGTPEFVAP 186
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIR 760
+ + +G G+F V K + A K I ++ +S+ VS E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N+I + + +E L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ----- 122
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNV-LLDYDMVA---HVGDFGLAKFLSNHHLDIASK 876
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D ++
Sbjct: 123 -ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNE 173
Query: 877 TPSSSIGIKGTVGYVAP 893
+ I GT +VAP
Sbjct: 174 FKN----IFGTPAFVAP 186
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 72 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 122
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MCGTLPY 173
Query: 891 VAP 893
VAP
Sbjct: 174 VAP 176
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 72 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 122
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MCGTLPY 173
Query: 891 VAP 893
VAP
Sbjct: 174 VAP 176
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 69
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 70 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 120
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 121 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MCGTLPY 171
Query: 891 VAP 893
VAP
Sbjct: 172 VAP 174
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 71 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 121
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MCGTLPY 172
Query: 891 VAP 893
VAP
Sbjct: 173 VAP 175
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 71 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 121
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MCGTLPY 172
Query: 891 VAP 893
VAP
Sbjct: 173 VAP 175
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 72 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 122
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MCGTLPY 173
Query: 891 VAP 893
VAP
Sbjct: 174 VAP 176
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 71 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 121
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MCGTLPY 172
Query: 891 VAP 893
VAP
Sbjct: 173 VAP 175
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 71 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 121
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MCGTLPY 172
Query: 891 VAP 893
VAP
Sbjct: 173 VAP 175
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 71 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 121
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MCGTLPY 172
Query: 891 VAP 893
VAP
Sbjct: 173 VAP 175
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 72 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 122
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MCGTLPY 173
Query: 891 VAP 893
VAP
Sbjct: 174 VAP 176
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 72 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 122
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MCGTLPY 173
Query: 891 VAP 893
VAP
Sbjct: 174 VAP 176
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 32/185 (17%)
Query: 706 EFSSSNM-----IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGAS---KSFVSECE 754
EF +N+ +G G FG V + LG ++ V+ V V LK + ++ +SE +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 755 ALRNI-RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLI 813
+ ++ +H N++ ++ C+ V + EY G L ++L + + R L
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLV-----ITEYCCYGDLLNFLRRKS-----RVLETD 151
Query: 814 QRMNIAIDVASAIEYLHHHCQPPM----------VHGDLKPSNVLLDYDMVAHVGDFGLA 863
IA AS + LH Q +H D+ NVLL VA +GDFGLA
Sbjct: 152 PAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 864 KFLSN 868
+ + N
Sbjct: 212 RDIMN 216
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 29/195 (14%)
Query: 705 SEFSSSNMIGQGRFGTVY--KGILGDD-EMVVAVKVIN---LKQKGASKSFVSECEALRN 758
S+F ++GQG FG V+ K I G D + A+KV+ LK + ++ + E + L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVE 82
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+ H ++K+ + EG + L+ +++ G L L + EV + +
Sbjct: 83 VNHPFIVKLHYAFQT---EGKLY--LILDFLRGGDLFTRLSK-----EVMFTEEDVKFYL 132
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A ++A A+++LH +++ DLKP N+LLD + + DFGL+K +H
Sbjct: 133 A-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-------- 180
Query: 879 SSSIGIKGTVGYVAP 893
+ GTV Y+AP
Sbjct: 181 KKAYSFCGTVEYMAP 195
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 39/193 (20%)
Query: 706 EFSSSNM-----IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGAS---KSFVSECE 754
EF +N+ +G G FG V + LG ++ V+ V V LK + ++ +SE +
Sbjct: 27 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 86
Query: 755 ALRNI-RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN----------- 802
+ ++ +H N++ ++ C+ V + EY G L ++L +
Sbjct: 87 IMSHLGQHENIVNLLGACTHGGPVLV-----ITEYCCYGDLLNFLRRKAEAMLGPSLAPG 141
Query: 803 ------DQVEVRKLSLIQRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVA 855
D+ + R L L ++ + VA + +L +C +H D+ NVLL VA
Sbjct: 142 QDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVA 197
Query: 856 HVGDFGLAKFLSN 868
+GDFGLA+ + N
Sbjct: 198 KIGDFGLARDIMN 210
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 27/195 (13%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRH 761
T E+ +G+G F V + + A K+IN K+ A + E R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 762 RNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821
N++++ S EG F LVF+ + G L + + E IQ++
Sbjct: 63 PNIVRL---HDSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI----- 112
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
+E ++H +VH DLKP N+LL + DFGLA +
Sbjct: 113 ----LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-------- 160
Query: 879 SSSIGIKGTVGYVAP 893
+ G GT GY++P
Sbjct: 161 QAWFGFAGTPGYLSP 175
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 29/195 (14%)
Query: 705 SEFSSSNMIGQGRFGTVY--KGILGDD-EMVVAVKVIN---LKQKGASKSFVSECEALRN 758
S+F ++GQG FG V+ K I G D + A+KV+ LK + ++ + E + L
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVE 83
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+ H ++K+ + EG + L+ +++ G L L + EV + +
Sbjct: 84 VNHPFIVKLHYAFQT---EGKLY--LILDFLRGGDLFTRLSK-----EVMFTEEDVKFYL 133
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A ++A A+++LH +++ DLKP N+LLD + + DFGL+K +H
Sbjct: 134 A-ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-------- 181
Query: 879 SSSIGIKGTVGYVAP 893
+ GTV Y+AP
Sbjct: 182 KKAYSFCGTVEYMAP 196
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNL 764
+S IG G V++ +L + + + A+K +NL++ S+ +E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 115
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLE--DWLHQSNDQVEVRKLSLIQRMNIAIDV 822
KII + D+E D ++ ME G+++ WL + + + +R + ++
Sbjct: 116 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKK------KSIDPWERKSYWKNM 164
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSI 882
A+ +H H +VH DLKP+N L+ D + + DFG+A + D S S +
Sbjct: 165 LEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQM---QPDTTSVVKDSQV 217
Query: 883 GIKGTVGYVAP 893
G V Y+ P
Sbjct: 218 ---GAVNYMPP 225
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 72 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MCGTLPY 173
Query: 891 VAP 893
VAP
Sbjct: 174 VAP 176
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 71 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MCGTLPY 172
Query: 891 VAP 893
VAP
Sbjct: 173 VAP 175
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 27/205 (13%)
Query: 694 MVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN---LKQKGASKSFV 750
+V E+ +F +IG+G F V + V A+K++N + ++G F
Sbjct: 50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFR 109
Query: 751 SECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQV--EVR 808
E + L N R + ++ F+ ++ LV EY G L L + +++ E+
Sbjct: 110 EERDVLVNGDRRWITQL-----HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA 164
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
+ L + + +AID + Y VH D+KP N+LLD G LA F S
Sbjct: 165 RFYLAE-IVMAIDSVHRLGY---------VHRDIKPDNILLD-----RCGHIRLADFGSC 209
Query: 869 HHLDIASKTPSSSIGIKGTVGYVAP 893
L A T S + + GT Y++P
Sbjct: 210 LKLR-ADGTVRSLVAV-GTPDYLSP 232
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNL 764
+S IG G V++ +L + + + A+K +NL++ S+ +E L ++ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 87
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLE--DWLHQSNDQVEVRKLSLIQRMNIAIDV 822
KII + D+E D ++ ME G+++ WL + + + +R + ++
Sbjct: 88 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKK------KSIDPWERKSYWKNM 136
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSI 882
A+ +H H +VH DLKP+N L+ D + + DFG+A + D S +
Sbjct: 137 LEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQP---DXXXVVKDSQV 189
Query: 883 GIKGTVGYVAP 893
GTV Y+ P
Sbjct: 190 ---GTVNYMPP 197
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIR 760
+ + +G G+F V K + A K I ++ +S+ VS E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N+I + + +E L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ----- 122
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNV-LLDYDMVA---HVGDFGLAKFLSNHHLDIASK 876
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D ++
Sbjct: 123 -ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNE 173
Query: 877 TPSSSIGIKGTVGYVAP 893
+ I GT +VAP
Sbjct: 174 FKN----IFGTPEFVAP 186
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 17/145 (11%)
Query: 709 SSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFV-SECEALRNIR-HRNLIK 766
+++G+G V I AVK+I KQ G +S V E E L + HRN+++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQCQGHRNVLE 75
Query: 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI 826
+I D LVFE M GS+ +H+ E+ ++Q DVASA+
Sbjct: 76 LIEFFEEEDR-----FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ------DVASAL 124
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDY 851
++LH+ + H DLKP N+L ++
Sbjct: 125 DFLHNK---GIAHRDLKPENILCEH 146
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
IG+G G V VAVK+++L+++ + +E +R+ +H N++++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMY---- 108
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+ G + L+ E+++ G+L D + Q +L+ Q + V A+ YLH
Sbjct: 109 KSYLVGEELWVLM-EFLQGGALTDIVSQV-------RLNEEQIATVCEAVLQALAYLHAQ 160
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVA 892
++H D+K ++LL D + DFG +S D+ + + GT ++A
Sbjct: 161 G---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISK---DVPKRK-----XLVGTPYWMA 209
Query: 893 P 893
P
Sbjct: 210 P 210
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIR 760
+ + +G G+F V K + A K I ++ +S+ VS E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N+I + + +E L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ----- 122
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNV-LLDYDMVA---HVGDFGLAKFLSNHHLDIASK 876
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D ++
Sbjct: 123 -ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNE 173
Query: 877 TPSSSIGIKGTVGYVAP 893
+ I GT +VAP
Sbjct: 174 FKN----IFGTPEFVAP 186
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 30/184 (16%)
Query: 706 EFSSSNM-----IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGAS---KSFVSECE 754
EF +N+ +G G FG V + LG ++ V+ V V LK + ++ +SE +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 755 ALRNI-RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEV------ 807
+ ++ +H N++ ++ C+ V + EY G L ++L + + +E
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLV-----ITEYCCYGDLLNFLRRKSRVLETDPAFAI 156
Query: 808 --RKLSLIQRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
LS ++ + VA + +L +C +H D+ NVLL VA +GDFGLA+
Sbjct: 157 ANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLAR 212
Query: 865 FLSN 868
+ N
Sbjct: 213 DIMN 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 729 DEMVVAVKVINL---KQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALV 785
D VAVKV+ + F E + + H ++ + + G +V
Sbjct: 36 DHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG-PLPYIV 94
Query: 786 FEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPS 845
EY++ +L D +H R + +I D A+ + H + ++H D+KP+
Sbjct: 95 MEYVDGVTLRDIVHTEGPMTPKRAIEVIA------DACQALNFSHQNG---IIHRDVKPA 145
Query: 846 NVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
N+++ V DFG+A+ +++ + + + + + GT Y++P
Sbjct: 146 NIMISATNAVKVMDFGIARAIAD-----SGNSVTQTAAVIGTAQYLSP 188
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS------ECEALRNIR 760
+ + +G G+F V K + A K I ++ +S+ VS E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI 820
H N+I + + +E L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ----- 122
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNV-LLDYDMVA---HVGDFGLAKFLSNHHLDIASK 876
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D ++
Sbjct: 123 -ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNE 173
Query: 877 TPSSSIGIKGTVGYVAP 893
+ I GT +VAP
Sbjct: 174 FKN----IFGTPEFVAP 186
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 729 DEMVVAVKVINL---KQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALV 785
D VAVKV+ + F E + + H ++ + + G +V
Sbjct: 36 DHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG-PLPYIV 94
Query: 786 FEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPS 845
EY++ +L D +H R + +I D A+ + H + ++H D+KP+
Sbjct: 95 MEYVDGVTLRDIVHTEGPMTPKRAIEVIA------DACQALNFSHQNG---IIHRDVKPA 145
Query: 846 NVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
N+++ V DFG+A+ +++ + + + + + GT Y++P
Sbjct: 146 NIMISATNAVKVMDFGIARAIAD-----SGNSVTQTAAVIGTAQYLSP 188
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 733 VAVKVINL---KQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYM 789
VAVKV+ + F E + + H ++ + + G +V EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAG-PLPYIVMEYV 98
Query: 790 ENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 849
+ +L D +H R + +I D A+ + H + ++H D+KP+N+++
Sbjct: 99 DGVTLRDIVHTEGPMTPKRAIEVIA------DACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 850 DYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
V DFG+A+ +++ + + + + + GT Y++P
Sbjct: 150 SATNAVKVMDFGIARAIAD-----SGNSVTQTAAVIGTAQYLSP 188
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 15/153 (9%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+G G FG V++ + V K IN + +E + + H LI +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINL----- 113
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
FE L+ E++ G L D + E K+S + +N ++++H H
Sbjct: 114 HDAFEDKYEMVLILEFLSGGELFDRI-----AAEDYKMSEAEVINYMRQACEGLKHMHEH 168
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVG--DFGLA 863
+VH D+KP N++ + + V DFGLA
Sbjct: 169 S---IVHLDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Query: 729 DEMVVAVKVINL---KQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALV 785
D VAVKV+ + F E + + H ++ + + G +V
Sbjct: 36 DHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG-PLPYIV 94
Query: 786 FEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPS 845
EY++ +L D +H R + +I D A+ + H + ++H D+KP+
Sbjct: 95 MEYVDGVTLRDIVHTEGPMTPKRAIEVIA------DACQALNFSHQNG---IIHRDVKPA 145
Query: 846 NVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
N+L+ V DFG+A+ +++ + + + + GT Y++P
Sbjct: 146 NILISATNAVKVVDFGIARAIAD-----SGNSVXQTAAVIGTAQYLSP 188
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 54/110 (49%), Gaps = 14/110 (12%)
Query: 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+V EY++ +L D +H R + +I D A+ + H + ++H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA------DACQALNFSHQNG---IIHRDVK 143
Query: 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
P+N+++ V DFG+A+ +++ + + + + + GT Y++P
Sbjct: 144 PANIMISATNAVKVMDFGIARAIAD-----SGNSVTQTAAVIGTAQYLSP 188
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G +G V + E VAVK++++K+ ++ E + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY--- 71
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 72 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 122
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MCGTLPY 173
Query: 891 VAP 893
VAP
Sbjct: 174 VAP 176
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNLIKIITI 770
+G+G F V + + A K+IN K+ A + E R ++H N++++
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL--- 86
Query: 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH 830
S EG + L+F+ + G L + + E IQ++ A+ LH
Sbjct: 87 HDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV--------LH 136
Query: 831 HHCQPPMVHGDLKPSNVLLDYDM---VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGT 887
H Q +VH DLKP N+LL + + DFGLA +++ + + G GT
Sbjct: 137 CH-QMGVVHRDLKPENLLLASKLKGAAVKLADFGLA-------IEVEGEQ-QAWFGFAGT 187
Query: 888 VGYVAP 893
GY++P
Sbjct: 188 PGYLSP 193
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS-ECEALRNIRHRNLI 765
+++ +IG G FG V++ L + + V KV+ K F + E + +R ++H N++
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ------DKRFKNRELQIMRIVKHPNVV 95
Query: 766 KIIT-ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+ S+ D + F LV EY+ H + + + L + M +
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM---YQLLR 152
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDM-VAHVGDFGLAKFL 866
++ Y+H + H D+KP N+LLD V + DFG AK L
Sbjct: 153 SLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 29/215 (13%)
Query: 686 SPMEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK 741
S M + P EL+K E + + + +G G +G+V + VAVK ++
Sbjct: 18 SHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 77
Query: 742 QKGA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWL 798
+ +K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 78 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA----- 130
Query: 799 HQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 131 -DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 186
Query: 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
DFGLA+ T G T Y AP
Sbjct: 187 DFGLAR-----------HTDDEMTGYVATRWYRAP 210
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 710 SNMIGQGRFGTVYKGILGDDEMVVAVKVIN----LKQKGASKSFVSECEALRNIRHRNLI 765
S+++GQG V++G + A+KV N L+ + E E L+ + H+N++
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ---MREFEVLKKLNHKNIV 70
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
K+ I T K L+ E+ GSL L + ++ L + + + DV
Sbjct: 71 KLFAIEEETT---TRHKVLIMEFCPCGSLYTVLEEPSN---AYGLPESEFLIVLRDVVGG 124
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLL----DYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
+ +L + +VH ++KP N++ D V + DFG A+ L +
Sbjct: 125 MNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED---------DEQF 172
Query: 882 IGIKGTVGYVAPGKF 896
+ + GT Y+ P +
Sbjct: 173 VSLYGTEEYLHPDMY 187
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 710 SNMIGQGRFGTVYKGILGDDEMVVAVKVIN----LKQKGASKSFVSECEALRNIRHRNLI 765
S+++GQG V++G + A+KV N L+ + E E L+ + H+N++
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ---MREFEVLKKLNHKNIV 70
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
K+ I T K L+ E+ GSL L + ++ L + + + DV
Sbjct: 71 KLFAIEEETT---TRHKVLIMEFCPCGSLYTVLEEPSN---AYGLPESEFLIVLRDVVGG 124
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLL----DYDMVAHVGDFGLAKFLSN 868
+ +L + +VH ++KP N++ D V + DFG A+ L +
Sbjct: 125 MNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 29/215 (13%)
Query: 686 SPMEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK 741
S M + P EL+K E + + + +G G +G+V + VAVK ++
Sbjct: 19 SHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 78
Query: 742 QKGA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWL 798
+ +K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 79 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA----- 131
Query: 799 HQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 132 -DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 187
Query: 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
DFGLA+ T G T Y AP
Sbjct: 188 DFGLAR-----------HTDDEMTGYVATRWYRAP 211
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+G G FG VYK + + A KVI K + + ++ E E L H ++K++
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL---G 75
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+ +G + ++ E+ G+++ + + + R L+ Q + + A+ +LH
Sbjct: 76 AYYHDGKLW--IMIEFCPGGAVDAIMLELD-----RGLTEPQIQVVCRQMLEALNFLH-- 126
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
++H DLK NVL+ + + DFG++
Sbjct: 127 -SKRIIHRDLKAGNVLMTLEGDIRLADFGVS 156
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG--AS 746
P EL+K E + + + +G G +G+V + +AVK ++ + +
Sbjct: 35 PTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHA 94
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + +T E + LV M G+ N+ V
Sbjct: 95 KRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM--GA------DLNNIV 146
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 147 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 202
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 203 ----------HTDDEMTGYVATRWYRAP 220
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+G G FG VYK + + A KVI K + + ++ E E L H ++K++
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL---G 83
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
+ +G + ++ E+ G+++ + + + R L+ Q + + A+ +LH
Sbjct: 84 AYYHDGKLW--IMIEFCPGGAVDAIMLELD-----RGLTEPQIQVVCRQMLEALNFLH-- 134
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
++H DLK NVL+ + + DFG++
Sbjct: 135 -SKRIIHRDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 22/164 (13%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+F IG G FG +Y G VA+K+ N+K K + E + R ++
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYR------IL 59
Query: 766 KIITICSSTDFEGV--DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVA 823
+ T + + GV D+ LV + + SLED + + RKLSL + +A +
Sbjct: 60 QGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCS-----RKLSLKTVLMLADQMI 113
Query: 824 SAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVA---HVGDFGLAK 864
+ +E++H +H D+KP N L+ A ++ DFGLAK
Sbjct: 114 NRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 16/161 (9%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN---LKQKGASKSFVSECEALRNIRHRN 763
F ++G+G FG V + + + AVKV+ + Q + ++E L R+
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVA 823
+ + C F+ D V E++ G L + +S R+ + A ++
Sbjct: 85 FLTQLFCC----FQTPDRLFFVMEFVNGGDLMFHIQKS------RRFDEARARFYAAEII 134
Query: 824 SAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
SA+ +LH +++ DLK NVLLD++ + DFG+ K
Sbjct: 135 SALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + IG G +G+V + VAVK ++ + +
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 122
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR- 178
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 179 ----------HTDDEMTGYVATRWYRAP 196
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 23/183 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771
+G+G G V + E VAVK++++K+ ++ E + + H N++K
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
EG + + L EY G L D + E ++ + + YLH
Sbjct: 71 -GHRREG-NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 121
Query: 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK-FLSNHHLDIASKTPSSSIGIKGTVGY 890
+ H D+KP N+LLD + DFGLA F N+ + +K + GT+ Y
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MCGTLPY 172
Query: 891 VAP 893
VAP
Sbjct: 173 VAP 175
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 8/139 (5%)
Query: 719 GTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778
G ++KG +++VV V + S+ F EC LR H N++ ++ C S
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP--- 80
Query: 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMV 838
L+ + GSL + LH+ + V + Q + A+D A +L H +P +
Sbjct: 81 APHPTLITHWXPYGSLYNVLHEGTNFV----VDQSQAVKFALDXARGXAFL-HTLEPLIP 135
Query: 839 HGDLKPSNVLLDYDMVAHV 857
L +V +D D A +
Sbjct: 136 RHALNSRSVXIDEDXTARI 154
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 36/201 (17%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVS---------ECE 754
+ ++S+ + +G G FG V+ + + V VK I K+K ++ E
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIK-KEKVLEDCWIEDPKLGKVTLEIA 81
Query: 755 ALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLH--QSNDQVEVRKLSL 812
L + H N+IK++ I FE F LV E ++GS D + +++ S
Sbjct: 82 ILSRVEHANIIKVLDI-----FENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLASY 134
Query: 813 IQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872
I R + SA+ YL ++H D+K N+++ D + DFG A +L L
Sbjct: 135 IFR-----QLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL- 185
Query: 873 IASKTPSSSIGIKGTVGYVAP 893
GT+ Y AP
Sbjct: 186 --------FYTFCGTIEYCAP 198
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 113 LNNIVKXQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDF 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMTGXVATRWYRAP 191
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 6 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 65
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 117
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 118 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 174
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 175 GLAR-----------HTDDEMTGYVATRWYRAP 196
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 42/191 (21%)
Query: 706 EFSSSNM-----IGQGRFGTVYKGI---LGDDEMVVAVKVINLKQKGAS---KSFVSECE 754
EF +N+ +G G FG V + LG ++ V+ V V LK + ++ +SE +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 755 ALRNI-RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWL--------------- 798
+ ++ +H N++ ++ C+ V + EY G L ++L
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLV-----ITEYCCYGDLLNFLRRKRPPGLEYSYNPS 156
Query: 799 HQSNDQVEVRKLSLIQRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHV 857
H +Q+ R L ++ + VA + +L +C +H D+ NVLL VA +
Sbjct: 157 HNPEEQLSSRDL-----LHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKI 207
Query: 858 GDFGLAKFLSN 868
GDFGLA+ + N
Sbjct: 208 GDFGLARDIMN 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V + VAVK ++ + +
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 61
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 113
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 169
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 170 ----------HTDDEMTGYVATRWYRAP 187
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 71
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 123
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 124 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDF 180
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 181 GLAR-----------HTDDEMTGYVATRWYRAP 202
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 62
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 114
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 115 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 171
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 172 GLAR-----------HTDDEMTGYVATRWYRAP 193
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V + VAVK ++ + +
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 114
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 115 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 170
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 171 ----------HTDDEMTGYVATRWYRAP 188
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V + VAVK ++ + +
Sbjct: 4 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 63
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 64 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 115
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 116 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 171
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 172 ----------HTDDEMTGYVATRWYRAP 189
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 72
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 124
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 125 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 181
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 182 GLAR-----------HTDDEMTGYVATRWYRAP 203
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 145/359 (40%), Gaps = 67/359 (18%)
Query: 229 AENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPD 288
+ NQ + + P + N++ + I + N+ + I P L NL NL L + NN + I D
Sbjct: 71 SNNQLTDITP--LKNLTKLVDILMNNNQIADITP---LANLTNLTGLTLF-NNQITDI-D 123
Query: 289 SLSNASNLELLDLPSNQFKGKVSIDFSSXXXXXXXXXXXXXXGTGTANDLDFVIFLSNCS 348
L N +NL L+L SN D S+ ++N + + L+N +
Sbjct: 124 PLKNLTNLNRLELSSNTIS-----DISALSGLTSLQQLSF-----SSNQVTDLKPLANLT 173
Query: 349 SLKVLSLSDNQFGG-ELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVN 407
+L+ L +S N+ + + NL L NQIS P GI L NL +L N
Sbjct: 174 TLERLDISSNKVSDISVLAKLTNLE----SLIATNNQISDITPLGI--LTNLDELSLNGN 227
Query: 408 QFH--GTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIP-SS 464
Q GT+ + L NL L + NN + P L LTKL L LG+N + P +
Sbjct: 228 QLKDIGTL----ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAG 281
Query: 465 LGNCQNLILFIASYNKLTGDLPQQLLSITTXXXXXXXXXXXXXXXXXXQVGNLKNLVMLD 524
L NL L + N+L P + NLKNL L
Sbjct: 282 LTALTNLEL---NENQLEDISP---------------------------ISNLKNLTYLT 311
Query: 525 ISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIP 583
+ N S + PV S+ L+ L S N V S L +I L+ N +S P
Sbjct: 312 LYFNNISDISPV--SSLTKLQRLFFSNNKVSDVS--SLANLTNINWLSAGHNQISDLTP 366
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 72
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 124
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 125 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 181
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 182 GLAR-----------HTDDEMTGYVATRWYRAP 203
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V + VAVK ++ + +
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 114
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 115 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 170
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 171 ----------HTDDEMTGYVATRWYRAP 188
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 7 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 66
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 118
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 119 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 175
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 176 GLAR-----------HTDDEMTGYVATRWYRAP 197
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRN 758
++ T E+ +G+G F V + + A +IN K+ A + E R
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL 66
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
++H N++++ S EG + L+F+ + G L + + E IQ++
Sbjct: 67 LKHPNIVRL---HDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADASHCIQQILE 121
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM---VAHVGDFGLAKFLSNHHLDIAS 875
A+ LH H Q +VH +LKP N+LL + + DFGLA +++
Sbjct: 122 AV--------LHCH-QMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-------IEVEG 165
Query: 876 KTPSSSIGIKGTVGYVAP 893
+ + G GT GY++P
Sbjct: 166 EQ-QAWFGFAGTPGYLSP 182
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V + VAVK ++ + +
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 122
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR- 178
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 179 ----------HTDDEMTGYVATRWYRAP 196
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN--LK 741
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQ 72
Query: 742 QKGASKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 124
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 125 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 181
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 182 GLAR-----------HTDDEMTGYVATRWYRAP 203
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 24 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 83
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 84 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 135
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 136 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 192
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 193 GLAR-----------HTDDEMTGYVATRWYRAP 214
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 30/180 (16%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMV-----VAVKV-----------INLKQKGAS 746
A E+ IGQG FG +Y + E V VKV + Q+ A
Sbjct: 33 AKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAK 92
Query: 747 KSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE 806
+ + R +++ + K D G ++ ++ + GS ++++N +
Sbjct: 93 PEQIQKWIRTRKLKYLGVPKYWG-SGLHDKNGKSYRFMIMDRF--GSDLQKIYEANAKRF 149
Query: 807 VRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY---DMVAHVGDFGLA 863
RK L +++ + +EY+H H VHGD+K SN+LL+Y D V ++ D+GLA
Sbjct: 150 SRKTVL----QLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQV-YLVDYGLA 201
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 10/164 (6%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLI 765
F ++G G +G VYKG + A+KV+++ + E L+ HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV-TGDEEEEIKQEINMLKKYSHHRNIA 84
Query: 766 KIITICSSTDFEGVDFK-ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+ G+D + LV E+ GS+ D + N + K I I ++
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWI--AYICREILR 140
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
+ +LH H ++H D+K NVLL + + DFG++ L
Sbjct: 141 GLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 181
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 71
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 123
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 124 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 180
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 181 GLAR-----------HTDDEMTGYVATRWYRAP 202
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 30/180 (16%)
Query: 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMV-----VAVKV-----------INLKQKGAS 746
A E+ IGQG FG +Y + E V VKV + Q+ A
Sbjct: 33 AKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAK 92
Query: 747 KSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVE 806
+ + R +++ + K D G ++ ++ + GS ++++N +
Sbjct: 93 PEQIQKWIRTRKLKYLGVPKYWG-SGLHDKNGKSYRFMIMDRF--GSDLQKIYEANAKRF 149
Query: 807 VRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY---DMVAHVGDFGLA 863
RK L +++ + +EY+H H VHGD+K SN+LL+Y D V V D+GLA
Sbjct: 150 SRKTVL----QLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLV-DYGLA 201
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V + VAVK ++ + +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 117
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 173
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 174 ----------HTDDEMTGYVATRWYRAP 191
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 113 LNNIVKXQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG--AS 746
P EL+K E + + + +G G +G+V + VAVK ++ + +
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 71
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 123
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 179
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 180 ----------HTDDEMTGYVATRWYRAP 197
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V + VAVK ++ + +
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 124
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 180
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 181 ----------HTADEMTGYVATRWYRAP 198
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V + VAVK ++ + +
Sbjct: 29 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 88
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 89 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 140
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 141 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 196
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 197 ----------HTDDEMXGYVATRWYRAP 214
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V + VAVK ++ + +
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 124
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 180
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 181 ----------HTADEMTGYVATRWYRAP 198
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V + VAVK ++ + +
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 124
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 180
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 181 ----------HTADEMTGYVATRWYRAP 198
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V + VAVK ++ + +
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 119
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 175
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 176 ----------HTDDEMTGYVATRWYRAP 193
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 62
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 114
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 115 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDF 171
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 172 GLAR-----------HTDDEMTGYVATRWYRAP 193
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V + VAVK ++ + +
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 122
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 178
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 179 ----------HTDDEMTGYVATRWYRAP 196
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V + VAVK ++ + +
Sbjct: 5 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 64
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 65 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 116
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 117 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 172
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 173 ----------HTDDEMTGYVATRWYRAP 190
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 7 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 66
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 118
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 119 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDF 175
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 176 GLAR-----------HTDDEMTGYVATRWYRAP 197
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 99 NLSFLRYINLADNGFRGD--------------IPQEIGNLFRLEKLALSNNSFSGTIPTN 144
+LS L+ N++ N F+ D +P EI NL L L LS+N + ++P
Sbjct: 230 DLSNLQIFNISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAE 288
Query: 145 LSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQL 189
L C L +F +N + +P E GNL LQ L V+ N L Q
Sbjct: 289 LGSCFQLKYFYFFDN-MVTTLPWEFGNLCNLQFLGVEGNPLEKQF 332
Score = 29.6 bits (65), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 437 IPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQL 489
+P+ + NL+ L LDL N L ++P+ LG+C L F ++ + LP +
Sbjct: 262 LPAEIKNLSNLRVLDLSHNRL-TSLPAELGSCFQLKYFYF-FDNMVTTLPWEF 312
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V + VAVK ++ + +
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 124
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 180
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 181 ----------HTDDEMTGYVATRWYRAP 198
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
+ S +E+LH Q +++ DLKP NVLLD D + D GLA L A +T +
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK------AGQTKTK- 347
Query: 882 IGIKGTVGYVAP 893
G GT G++AP
Sbjct: 348 -GYAGTPGFMAP 358
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
+ S +E+LH Q +++ DLKP NVLLD D + D GLA L A +T +
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK------AGQTKTK- 347
Query: 882 IGIKGTVGYVAP 893
G GT G++AP
Sbjct: 348 -GYAGTPGFMAP 358
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
+ S +E+LH Q +++ DLKP NVLLD D + D GLA L A +T +
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK------AGQTKTK- 347
Query: 882 IGIKGTVGYVAP 893
G GT G++AP
Sbjct: 348 -GYAGTPGFMAP 358
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881
+ S +E+LH Q +++ DLKP NVLLD D + D GLA L A +T +
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK------AGQTKTK- 347
Query: 882 IGIKGTVGYVAP 893
G GT G++AP
Sbjct: 348 -GYAGTPGFMAP 358
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 29/215 (13%)
Query: 686 SPMEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK 741
S M + P EL+K E + + + +G G +G+V VAVK ++
Sbjct: 19 SHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP 78
Query: 742 QKG--ASKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWL 798
+ +K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 79 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA----- 131
Query: 799 HQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 132 -DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 187
Query: 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
DFGLA+ T G T Y AP
Sbjct: 188 DFGLAR-----------HTDDEMTGYVATRWYRAP 211
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 29/215 (13%)
Query: 686 SPMEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK 741
S M + P EL+K E + + + +G G +G+V VAVK ++
Sbjct: 18 SHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP 77
Query: 742 QKG--ASKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWL 798
+ +K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 78 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA----- 130
Query: 799 HQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 131 -DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 186
Query: 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
DFGLA+ T G T Y AP
Sbjct: 187 DFGLAR-----------HTDDEMTGYVATRWYRAP 210
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 85/191 (44%), Gaps = 18/191 (9%)
Query: 676 RRSTHKSVDTSPMEKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAV 735
R + V+T + + S+ ++ +G+G++ V++ I + V V
Sbjct: 8 RARVYTDVNTHRPREYWDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVV 67
Query: 736 KVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLE 795
K++ +K K E + L N+R IIT+ ALVFE++ N +
Sbjct: 68 KILKPVKKNKIKR---EIKILENLR--GGPNIITLADIVKDPVSRTPALVFEHVNNTDFK 122
Query: 796 DWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVA 855
L+Q+ ++R ++ A++Y H ++H D+KP NV++D++
Sbjct: 123 Q-LYQTLTDYDIR--------FYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRK 170
Query: 856 -HVGDFGLAKF 865
+ D+GLA+F
Sbjct: 171 LRLIDWGLAEF 181
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 29/215 (13%)
Query: 686 SPMEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK 741
S M + P EL+K E + + + +G G +G+V VAVK ++
Sbjct: 19 SHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP 78
Query: 742 QKG--ASKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWL 798
+ +K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 79 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA----- 131
Query: 799 HQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 132 -DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 187
Query: 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
DFGLA+ T G T Y AP
Sbjct: 188 DFGLAR-----------HTDDEMXGXVATRWYRAP 211
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMAGFVATRWYRAP 191
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V VAVK ++ + +
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 113
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 169
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 170 ----------HTDDEMAGFVATRWYRAP 187
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + D+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDY 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMAGFVATRWYRAP 191
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 29/195 (14%)
Query: 705 SEFSSSNMIGQGRFGTVY---KGILGDDEMVVAVKVIN---LKQKGASKSFVSECEALRN 758
S F ++GQG FG V+ K D + A+KV+ LK + ++ + E + L +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM-ERDILAD 86
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+ H ++K+ + EG + L+ +++ G L + K + ++
Sbjct: 87 VNHPFVVKLHYAFQT---EGKLY--LILDFLRGGDL---------FTRLSKEVMFTEEDV 132
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
+A L H +++ DLKP N+LLD + + DFGL+K +H
Sbjct: 133 KFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHE-------- 184
Query: 879 SSSIGIKGTVGYVAP 893
+ GTV Y+AP
Sbjct: 185 KKAYSFCGTVEYMAP 199
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 702 KATSEFSSSNMIGQGRFGTVYKG--ILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI 759
+ +++ IG G FG +Y G I +E+ + ++ + K E + + +
Sbjct: 6 RVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKH----PQLHIESKFYKMM 61
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+ I I C + EG D+ +V E + SLED + + RK SL + +A
Sbjct: 62 QGGVGIPSIKWCGA---EG-DYNVMVMELL-GPSLEDLFNFCS-----RKFSLKTVLLLA 111
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM---VAHVGDFGLAK 864
+ S IEY+H +H D+KP N L+ + ++ DFGLAK
Sbjct: 112 DQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V VAVK ++ + +
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 113
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 169
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 170 ----------HTDDEMTGYVATRWYRAP 187
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 146/365 (40%), Gaps = 80/365 (21%)
Query: 229 AENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPD 288
+ NQ + + P + N++ + I + N+ + I P L NL NL L + NN + I D
Sbjct: 71 SNNQLTDITP--LKNLTKLVDILMNNNQIADITP---LANLTNLTGLTLF-NNQITDI-D 123
Query: 289 SLSNASNLELLDLPSNQFKGKVSIDFSSXXXXXXXXXXXXXXGTGTANDLDF------VI 342
L N +NL L+L SN D S+ G + L+F +
Sbjct: 124 PLKNLTNLNRLELSSNTIS-----DISALS------------GLTSLQQLNFGNQVTDLK 166
Query: 343 FLSNCSSLKVLSLSDNQFGG-ELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLIT 401
L+N ++L+ L +S N+ + + NL L NQIS P GI L NL
Sbjct: 167 PLANLTTLERLDISSNKVSDISVLAKLTNLE----SLIATNNQISDITPLGI--LTNLDE 220
Query: 402 FTLEVNQFH--GTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQG 459
+L NQ GT+ + L NL L + NN + P L LTKL L LG+N +
Sbjct: 221 LSLNGNQLKDIGTL----ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 274
Query: 460 NIP-SSLGNCQNLILFIASYNKLTGDLPQQLLSITTXXXXXXXXXXXXXXXXXXQVGNLK 518
P + L NL L + N+L P + NLK
Sbjct: 275 ISPLAGLTALTNLEL---NENQLEDISP---------------------------ISNLK 304
Query: 519 NLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNL 578
NL L + N S + PV S+ L+ L S N V S L +I L+ N +
Sbjct: 305 NLTYLTLYFNNISDISPV--SSLTKLQRLFFSNNKVSDVS--SLANLTNINWLSAGHNQI 360
Query: 579 SGKIP 583
S P
Sbjct: 361 SDLTP 365
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 22/193 (11%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
IG G FG +Y + A V+ ++ + F SE + + + ++ IK
Sbjct: 45 IGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLF-SELKFYQRVAKKDCIKKWIERK 103
Query: 773 STDFEGV---------DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVA 823
D+ G+ +FK + +M L L + + Q K S + + + I +
Sbjct: 104 QLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTV--LQLGIRML 161
Query: 824 SAIEYLHHHCQPPMVHGDLKPSNVLLDY---DMVAHVGDFGLA-KFLSNHHLDIASKTPS 879
+EY+H + VHGD+K +N+LL Y D V ++ D+GL+ ++ N + + P
Sbjct: 162 DVLEYIHEN---EYVHGDIKAANLLLGYKNPDQV-YLADYGLSYRYCPNGNHKQYQENPR 217
Query: 880 SSIGIKGTVGYVA 892
G GT+ + +
Sbjct: 218 K--GHNGTIEFTS 228
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 128/313 (40%), Gaps = 63/313 (20%)
Query: 229 AENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPD 288
+ NQ + + P + N++ + I + N+ + I P L NL NL L + NN + I D
Sbjct: 71 SNNQLTDITP--LKNLTKLVDILMNNNQIADITP---LANLTNLTGLTLF-NNQITDI-D 123
Query: 289 SLSNASNLELLDLPSNQFKGKVSIDFSSXXXXXXXXXXXXXXGTGTANDLDFVIFLSNCS 348
L N +NL L+L SN D S+ ++N + + L+N +
Sbjct: 124 PLKNLTNLNRLELSSNTIS-----DISALSGLTSLQQLSF-----SSNQVTDLKPLANLT 173
Query: 349 SLKVLSLSDNQFGG-ELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVN 407
+L+ L +S N+ + + NL L NQIS P GI L NL +L N
Sbjct: 174 TLERLDISSNKVSDISVLAKLTNLE----SLIATNNQISDITPLGI--LTNLDELSLNGN 227
Query: 408 QFH--GTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIP-SS 464
Q GT+ + L NL L + NN + P L LTKL L LG+N + P +
Sbjct: 228 QLKDIGTL----ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAG 281
Query: 465 LGNCQNLILFIASYNKLTGDLPQQLLSITTXXXXXXXXXXXXXXXXXXQVGNLKNLVMLD 524
L NL L + N+L P + NLKNL L
Sbjct: 282 LTALTNLEL---NENQLEDISP---------------------------ISNLKNLTYLT 311
Query: 525 ISSNQFSGVIPVT 537
+ N S + PV+
Sbjct: 312 LYFNNISDISPVS 324
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 27/188 (14%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+G+G +G V K ++AVK I ++ V+ E R + ++ C
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRI--------RATVNSQEQKRLLMDLDISMRTVDCP 110
Query: 773 ST-DFEGVDFKA----LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIE 827
T F G F+ + E M+ SL+ + Q D+ + ++ + IA+ + A+E
Sbjct: 111 FTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALE 167
Query: 828 YLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGT 887
+LH ++H D+KPSNVL++ + DFG++ +L +D +KT + G
Sbjct: 168 HLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL----VDSVAKTIDA-----GC 216
Query: 888 VGYVAPGK 895
Y+AP +
Sbjct: 217 KPYMAPER 224
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 19/149 (12%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRN--------L 764
+G G F TV+ + VA+KV+ Q +++ + E + L+ +R + +
Sbjct: 39 LGWGHFSTVWLCWDMQGKRFVAMKVVKSAQH-YTETALDEIKLLKCVRESDPSDPNKDMV 97
Query: 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQ-VEVRKLSLIQRMNIAIDVA 823
+++I + G+ +VFE + + L+ W+ +SN Q + VR + I R V
Sbjct: 98 VQLIDDFKISGMNGIHV-CMVFEVLGHHLLK-WIIKSNYQGLPVRCVKSIIRQ-----VL 150
Query: 824 SAIEYLHHHCQPPMVHGDLKPSNVLLDYD 852
++YLH C+ ++H D+KP N+L+ D
Sbjct: 151 QGLDYLHSKCK--IIHTDIKPENILMCVD 177
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 31/184 (16%)
Query: 706 EFSSSNMIGQGRFG-----TVYKGILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNI 759
S +G G FG T Y I D M VAVK++ + + +SE + L +
Sbjct: 47 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 106
Query: 760 -RHRNLIKIITICSSTDFEGVDFKALVF-EYMENGSLEDWLHQSNDQVEVRKLS------ 811
H N++ ++ C+ + LV EY G L ++L + D K S
Sbjct: 107 GNHMNIVNLLGACT------IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 160
Query: 812 ------LIQRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
L ++ + VA + +L +C +H DL N+LL + + + DFGLA+
Sbjct: 161 DELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR 216
Query: 865 FLSN 868
+ N
Sbjct: 217 HIKN 220
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 710 SNMIGQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKI 767
++IG+G +G VY + E VA+K +N + K + E L ++ +I++
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIE 827
+ D D +V E + + L+ E +++ + + +
Sbjct: 91 YDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYNLLLGEN------ 143
Query: 828 YLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++H + ++H DLKP+N LL+ D V DFGLA+
Sbjct: 144 FIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 22/191 (11%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEAL--RNIRHR 762
++F+ ++G+G FG V E + A+K+ LK+ + EC + R +
Sbjct: 19 TDFNFLMVLGKGSFGKVMLADRKGTEELYAIKI--LKKDVVIQDDDVECTMVEKRVLALL 76
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
+ +T S F+ VD V EY+ G L + Q V K Q + A ++
Sbjct: 77 DKPPFLTQLHSC-FQTVDRLYFVMEYVNGGDLMYHIQQ------VGKFKEPQAVFYAAEI 129
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSI 882
+ + +LH +++ DLK NV+LD + + DFG+ K H +D +
Sbjct: 130 SIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVTTREFC-- 181
Query: 883 GIKGTVGYVAP 893
GT Y+AP
Sbjct: 182 ---GTPDYIAP 189
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG--AS 746
P EL+K E + + + +G G +G+V VAVK ++ + +
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 71
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 123
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 179
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 180 ----------HTDDEMTGYVATRWYRAP 197
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 128/313 (40%), Gaps = 63/313 (20%)
Query: 229 AENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPD 288
+ NQ + + P + N++ + I + N+ + I P L NL NL L + NN + I D
Sbjct: 71 SNNQLTDITP--LKNLTKLVDILMNNNQIADITP---LANLTNLTGLTLF-NNQITDI-D 123
Query: 289 SLSNASNLELLDLPSNQFKGKVSIDFSSXXXXXXXXXXXXXXGTGTANDLDFVIFLSNCS 348
L N +NL L+L SN D S+ ++N + + L+N +
Sbjct: 124 PLKNLTNLNRLELSSNTIS-----DISALSGLTSLQQLNF-----SSNQVTDLKPLANLT 173
Query: 349 SLKVLSLSDNQFGG-ELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVN 407
+L+ L +S N+ + + NL L NQIS P GI L NL +L N
Sbjct: 174 TLERLDISSNKVSDISVLAKLTNLE----SLIATNNQISDITPLGI--LTNLDELSLNGN 227
Query: 408 QFH--GTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIP-SS 464
Q GT+ + L NL L + NN + P L LTKL L LG+N + P +
Sbjct: 228 QLKDIGTL----ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAG 281
Query: 465 LGNCQNLILFIASYNKLTGDLPQQLLSITTXXXXXXXXXXXXXXXXXXQVGNLKNLVMLD 524
L NL L + N+L P + NLKNL L
Sbjct: 282 LTALTNLEL---NENQLEDISP---------------------------ISNLKNLTYLT 311
Query: 525 ISSNQFSGVIPVT 537
+ N S + PV+
Sbjct: 312 LYFNNISDISPVS 324
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 31/184 (16%)
Query: 706 EFSSSNMIGQGRFG-----TVYKGILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNI 759
S +G G FG T Y I D M VAVK++ + + +SE + L +
Sbjct: 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83
Query: 760 -RHRNLIKIITICSSTDFEGVDFKALVF-EYMENGSLEDWLHQSNDQVEVRKLS------ 811
H N++ ++ C+ + LV EY G L ++L + D K S
Sbjct: 84 GNHMNIVNLLGACT------IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 137
Query: 812 ------LIQRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
L ++ + VA + +L +C +H DL N+LL + + + DFGLA+
Sbjct: 138 DELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR 193
Query: 865 FLSN 868
+ N
Sbjct: 194 DIKN 197
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 30/170 (17%)
Query: 713 IGQGRFGTVYKGILGDDEMV-----VAVKV-----------INLKQKGASKSFVSECEAL 756
IGQG FG +Y + E V VKV + Q+ A + +
Sbjct: 43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102
Query: 757 RNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRM 816
R +++ + K D G ++ ++ + GS ++++N + RK L
Sbjct: 103 RKLKYLGVPKYWG-SGLHDKNGKSYRFMIMDRF--GSDLQKIYEANAKRFSRKTVL---- 155
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY---DMVAHVGDFGLA 863
+++ + +EY+H H VHGD+K SN+LL+Y D V ++ D+GLA
Sbjct: 156 QLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQV-YLVDYGLA 201
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHR-----NLIKI 767
+G G F TV+ + VA+KV+ + +++ + E L+++R+ N +
Sbjct: 29 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEH-YTETALDEIRLLKSVRNSDPNDPNREMV 87
Query: 768 ITICSSTDFEGVD--FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ + GV+ +VFE + + L+ W+ +SN Q L L I V
Sbjct: 88 VQLLDDFKISGVNGTHICMVFEVLGHHLLK-WIIKSNYQ----GLPLPCVKKIIQQVLQG 142
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLL 849
++YLH C+ ++H D+KP N+LL
Sbjct: 143 LDYLHTKCR--IIHTDIKPENILL 164
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 26/168 (15%)
Query: 713 IGQGRFGTVYKG-ILGDDEMV----VAVKVINLKQKGAS----KSFVSECEALRNI-RHR 762
+G+G FG V + G D+ VAVK++ ++GA+ ++ +SE + L +I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 91
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRK------LSLIQRM 816
N++ ++ C+ G +V E+ + G+L +L ++ K L+L +
Sbjct: 92 NVVNLLGACTKP---GGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ VA +E+L +H DL N+LL V + DFGLA+
Sbjct: 148 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V VAVK ++ + +
Sbjct: 2 PTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 113
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 114 KCAKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 169
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 170 ----------HTDDEMTGYVATRWYRAP 187
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 20/156 (12%)
Query: 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI- 759
K + ++IG+G FG V K ++ VA+K+I K K+F+++ + +
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLL 104
Query: 760 ----RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQR 815
+H +K + F + LVFE M + +L D L +N R +SL
Sbjct: 105 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTN----FRGVSLNLT 159
Query: 816 MNIAIDVASAIEYLHHHCQPPM--VHGDLKPSNVLL 849
A + +A+ +L P + +H DLKP N+LL
Sbjct: 160 RKFAQQMCTALLFL---ATPELSIIHCDLKPENILL 192
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 20/156 (12%)
Query: 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI- 759
K + ++IG+G FG V K ++ VA+K+I K K+F+++ + +
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLL 104
Query: 760 ----RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQR 815
+H +K + F + LVFE M + +L D L +N R +SL
Sbjct: 105 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTN----FRGVSLNLT 159
Query: 816 MNIAIDVASAIEYLHHHCQPPM--VHGDLKPSNVLL 849
A + +A+ +L P + +H DLKP N+LL
Sbjct: 160 RKFAQQMCTALLFL---ATPELSIIHCDLKPENILL 192
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 143/359 (39%), Gaps = 68/359 (18%)
Query: 229 AENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPD 288
+ NQ + + P + N++ + I + N+ + I P L NL NL L + NN + I D
Sbjct: 75 SNNQLTDITP--LKNLTKLVDILMNNNQIADITP---LANLTNLTGLTLF-NNQITDI-D 127
Query: 289 SLSNASNLELLDLPSNQFKGKVSIDFSSXXXXXXXXXXXXXXGTGTANDLDFVIFLSNCS 348
L N +NL L+L SN D S+ N + + L+N +
Sbjct: 128 PLKNLTNLNRLELSSNTIS-----DISALSGLTSLQQLSF------GNQVTDLKPLANLT 176
Query: 349 SLKVLSLSDNQFGG-ELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVN 407
+L+ L +S N+ + + NL L NQIS P GI L NL +L N
Sbjct: 177 TLERLDISSNKVSDISVLAKLTNLE----SLIATNNQISDITPLGI--LTNLDELSLNGN 230
Query: 408 QFH--GTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIP-SS 464
Q GT+ + L NL L + NN + P L LTKL L LG+N + P +
Sbjct: 231 QLKDIGTL----ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAG 284
Query: 465 LGNCQNLILFIASYNKLTGDLPQQLLSITTXXXXXXXXXXXXXXXXXXQVGNLKNLVMLD 524
L NL L + N+L P + NLKNL L
Sbjct: 285 LTALTNLEL---NENQLEDISP---------------------------ISNLKNLTYLT 314
Query: 525 ISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIP 583
+ N S + PV S+ L+ L + N V S L +I L+ N +S P
Sbjct: 315 LYFNNISDISPV--SSLTKLQRLFFANNKVSDVS--SLANLTNINWLSAGHNQISDLTP 369
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 20/156 (12%)
Query: 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI- 759
K + ++IG+G FG V K ++ VA+K+I K K+F+++ + +
Sbjct: 31 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLL 85
Query: 760 ----RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQR 815
+H +K + F + LVFE M + +L D L +N R +SL
Sbjct: 86 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTN----FRGVSLNLT 140
Query: 816 MNIAIDVASAIEYLHHHCQPPM--VHGDLKPSNVLL 849
A + +A+ +L P + +H DLKP N+LL
Sbjct: 141 RKFAQQMCTALLFL---ATPELSIIHCDLKPENILL 173
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 25/185 (13%)
Query: 712 MIGQGRFGTVYKGILGDDEMVVAVKVIN---LKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G F ++ D + V A K++ L + + E R++ H++++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
FE DF +V E SL + LH+ + + R + +Y
Sbjct: 88 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-----QIVLGCQY 136
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTV 888
LH + ++H DLK N+ L+ D+ +GDFGLA + D K + GT
Sbjct: 137 LHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKK-----TLCGTP 185
Query: 889 GYVAP 893
Y+AP
Sbjct: 186 NYIAP 190
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + +G G +G+V VAVK ++ + +
Sbjct: 16 PTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 75
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 76 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 127
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 128 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 183
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 184 ----------HTDDEMTGYVATRWYRAP 201
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 25/185 (13%)
Query: 712 MIGQGRFGTVYKGILGDDEMVVAVKVIN---LKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G F ++ D + V A K++ L + + E R++ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
FE DF +V E SL + LH+ + + R + +Y
Sbjct: 84 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-----QIVLGCQY 132
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTV 888
LH + ++H DLK N+ L+ D+ +GDFGLA + D K + GT
Sbjct: 133 LHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKK-----TLCGTP 181
Query: 889 GYVAP 893
Y+AP
Sbjct: 182 NYIAP 186
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 25/185 (13%)
Query: 712 MIGQGRFGTVYKGILGDDEMVVAVKVIN---LKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G F ++ D + V A K++ L + + E R++ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
FE DF +V E SL + LH+ + + R + +Y
Sbjct: 84 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-----QIVLGCQY 132
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTV 888
LH + ++H DLK N+ L+ D+ +GDFGLA + D K + GT
Sbjct: 133 LHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKK-----TLCGTP 181
Query: 889 GYVAP 893
Y+AP
Sbjct: 182 NYIAP 186
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 126/313 (40%), Gaps = 64/313 (20%)
Query: 229 AENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPD 288
+ NQ + + P + N++ + I + N+ + I P L NL NL L + NN + I D
Sbjct: 76 SNNQLTDITP--LKNLTKLVDILMNNNQIADITP---LANLTNLTGLTLF-NNQITDI-D 128
Query: 289 SLSNASNLELLDLPSNQFKGKVSIDFSSXXXXXXXXXXXXXXGTGTANDLDFVIFLSNCS 348
L N +NL L+L SN D S+ N + + L+N +
Sbjct: 129 PLKNLTNLNRLELSSNTIS-----DISALSGLTSLQQLSF------GNQVTDLKPLANLT 177
Query: 349 SLKVLSLSDNQFGG-ELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVN 407
+L+ L +S N+ + + NL L NQIS P GI L NL +L N
Sbjct: 178 TLERLDISSNKVSDISVLAKLTNLE----SLIATNNQISDITPLGI--LTNLDELSLNGN 231
Query: 408 QFH--GTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIP-SS 464
Q GT+ + L NL L + NN + P L LTKL L LG+N + P +
Sbjct: 232 QLKDIGTL----ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAG 285
Query: 465 LGNCQNLILFIASYNKLTGDLPQQLLSITTXXXXXXXXXXXXXXXXXXQVGNLKNLVMLD 524
L NL L + N+L P + NLKNL L
Sbjct: 286 LTALTNLEL---NENQLEDISP---------------------------ISNLKNLTYLT 315
Query: 525 ISSNQFSGVIPVT 537
+ N S + PV+
Sbjct: 316 LYFNNISDISPVS 328
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 129/319 (40%), Gaps = 76/319 (23%)
Query: 229 AENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPD 288
+ NQ + + P + N++ + I + N+ + I P L NL NL L + NN + I D
Sbjct: 71 SNNQLTDITP--LKNLTKLVDILMNNNQIADITP---LANLTNLTGLTLF-NNQITDI-D 123
Query: 289 SLSNASNLELLDLPSNQFKGKVSIDFSSXXXXXXXXXXXXXXGTGTANDLDF------VI 342
L N +NL L+L SN D S+ G + L+F +
Sbjct: 124 PLKNLTNLNRLELSSNTIS-----DISALS------------GLTSLQQLNFGNQVTDLK 166
Query: 343 FLSNCSSLKVLSLSDNQFGG-ELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLIT 401
L+N ++L+ L +S N+ + + NL L NQIS P GI L NL
Sbjct: 167 PLANLTTLERLDISSNKVSDISVLAKLTNLE----SLIATNNQISDITPLGI--LTNLDE 220
Query: 402 FTLEVNQFH--GTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQG 459
+L NQ GT+ + L NL L + NN + P L LTKL L LG+N +
Sbjct: 221 LSLNGNQLKDIGTL----ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 274
Query: 460 NIP-SSLGNCQNLILFIASYNKLTGDLPQQLLSITTXXXXXXXXXXXXXXXXXXQVGNLK 518
P + L NL L + N+L P + NLK
Sbjct: 275 ISPLAGLTALTNLEL---NENQLEDISP---------------------------ISNLK 304
Query: 519 NLVMLDISSNQFSGVIPVT 537
NL L + N S + PV+
Sbjct: 305 NLTYLTLYFNNISDISPVS 323
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 31/177 (17%)
Query: 713 IGQGRFG-----TVYKGILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNI-RHRNLI 765
+G G FG T Y I D M VAVK++ + + +SE + L + H N++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 766 KIITICSSTDFEGVDFKALVF-EYMENGSLEDWLHQSNDQVEVRKLS------------L 812
++ C+ + LV EY G L ++L + D K S L
Sbjct: 107 NLLGACT------IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 813 IQRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
++ + VA + +L +C +H DL N+LL + + + DFGLA+ + N
Sbjct: 161 EDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKN 213
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHR-----NLIKI 767
+G G F TV+ + VA+KV+ + +++ + E L+++R+ N +
Sbjct: 45 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEH-YTETALDEIRLLKSVRNSDPNDPNREMV 103
Query: 768 ITICSSTDFEGVD--FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825
+ + GV+ +VFE + + L+ W+ +SN Q L L I V
Sbjct: 104 VQLLDDFKISGVNGTHICMVFEVLGHHLLK-WIIKSNYQ----GLPLPCVKKIIQQVLQG 158
Query: 826 IEYLHHHCQPPMVHGDLKPSNVLL 849
++YLH C+ ++H D+KP N+LL
Sbjct: 159 LDYLHTKCR--IIHTDIKPENILL 180
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 31/177 (17%)
Query: 713 IGQGRFG-----TVYKGILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNI-RHRNLI 765
+G G FG T Y I D M VAVK++ + + +SE + L + H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 766 KIITICSSTDFEGVDFKALVF-EYMENGSLEDWLHQSNDQVEVRKLS------------L 812
++ C+ + LV EY G L ++L + D K S L
Sbjct: 114 NLLGACT------IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 813 IQRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
++ + VA + +L +C +H DL N+LL + + + DFGLA+ + N
Sbjct: 168 EDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKN 220
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 27/170 (15%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEAL-RNIRHR 762
T + IG G + + I M AVK+I+ ++ ++ E E L R +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE----EIEILLRYGQHP 76
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-- 820
N+I + + ++ + +V E M+ G L D + +R+ +R A+
Sbjct: 77 NIITLKDV-----YDDGKYVYVVTELMKGGELLDKI--------LRQKFFSEREASAVLF 123
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD----MVAHVGDFGLAKFL 866
+ +EYLH +VH DLKPSN+L + + DFG AK L
Sbjct: 124 TITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Query: 712 MIGQGRFGTVYKGILGDDEMVVAVKVIN---LKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G F ++ D + V A K++ L + + E R++ H++++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
FE DF +V E SL + LH+ + + R + +Y
Sbjct: 108 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-----IVLGCQY 156
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
LH + ++H DLK N+ L+ D+ +GDFGLA
Sbjct: 157 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 31/177 (17%)
Query: 713 IGQGRFG-----TVYKGILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNI-RHRNLI 765
+G G FG T Y I D M VAVK++ + + +SE + L + H N++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 766 KIITICSSTDFEGVDFKALVF-EYMENGSLEDWLHQSNDQVEVRKLS------------L 812
++ C+ + LV EY G L ++L + D K S L
Sbjct: 109 NLLGACT------IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 813 IQRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
++ + VA + +L +C +H DL N+LL + + + DFGLA+ + N
Sbjct: 163 EDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKN 215
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Query: 712 MIGQGRFGTVYKGILGDDEMVVAVKVIN---LKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G F ++ D + V A K++ L + + E R++ H++++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
FE DF +V E SL + LH+ + + R + +Y
Sbjct: 106 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-----IVLGCQY 154
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
LH + ++H DLK N+ L+ D+ +GDFGLA
Sbjct: 155 LHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 23/159 (14%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEAL-RNIRHRNLIKIITIC 771
IG G + + + M AVKVI+ ++ S+ E E L R +H N+I + +
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE----EIEILLRYGQHPNIITLKDV- 89
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
++ LV E M G L D + + E R+ S + + +EYLH
Sbjct: 90 ----YDDGKHVYLVTELMRGGELLDKILRQKFFSE-REASFVLHT-----IGKTVEYLHS 139
Query: 832 HCQPPMVHGDLKPSNVLLDYD----MVAHVGDFGLAKFL 866
+VH DLKPSN+L + + DFG AK L
Sbjct: 140 QG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+F + +G G G V+K +V+A K+I+L+ K A+RN R L
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL- 117
Query: 766 KIITICSS---TDFEGVDFK----ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+++ C+S F G + ++ E+M+ GSL+ L ++ E ++ +++I
Sbjct: 118 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 173
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
A V + YL + ++H D+KPSN+L++ + DFG++
Sbjct: 174 A--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 214
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 26/162 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG + +LG + VAVK ++ + + +K E L+ + H+N+I ++ +
Sbjct: 34 AQGIVCAAFDTVLG---INVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVF 90
Query: 772 SST----DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
+ +F+ V LV E M + +L +H D +RM+ + + I
Sbjct: 91 TPQKTLEEFQDV---YLVMELM-DANLCQVIHMELDH---------ERMSYLLYQMLCGI 137
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868
++LH ++H DLKPSN+++ D + DFGLA+ S
Sbjct: 138 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAST 176
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG + +LG + VAVK ++ + + +K E L+ + H+N+I ++ +
Sbjct: 36 AQGIVCAAFDTVLG---INVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVF 92
Query: 772 SST----DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
+ +F+ V LV E M + +L +H D +RM+ + + I
Sbjct: 93 TPQKTLEEFQDV---YLVMELM-DANLCQVIHMELDH---------ERMSYLLYQMLCGI 139
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 38.9 bits (89), Expect = 0.011, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 27/186 (14%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+G+G +G V K ++AVK I ++ V+ E R + ++ C
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRI--------RATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 773 ST-DFEGVDFKA----LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIE 827
T F G F+ + E M+ SL+ + Q D+ + ++ + IA+ + A+E
Sbjct: 67 FTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALE 123
Query: 828 YLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGT 887
+LH ++H D+KPSNVL++ + DFG++ +L + D+A + G
Sbjct: 124 HLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD---DVAKDIDA------GC 172
Query: 888 VGYVAP 893
Y+AP
Sbjct: 173 KPYMAP 178
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 29/208 (13%)
Query: 693 PMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--S 746
P EL+K E + + + +G G +G+V + VAVK ++ + +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 747 KSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQV 805
K E L++++H N+I ++ + + + E + LV M G+ N+ V
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------DLNNIV 117
Query: 806 EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865
+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGL +
Sbjct: 118 KSQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR- 173
Query: 866 LSNHHLDIASKTPSSSIGIKGTVGYVAP 893
T G T Y AP
Sbjct: 174 ----------HTDDEMTGYVATRWYRAP 191
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 76/193 (39%), Gaps = 49/193 (25%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVIN---LKQKGAS--KSFVSECEALRNIRHRNLIKI 767
IGQG +G V I + A+K++N ++Q + +E ++ + H N+ ++
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQ------VEVRK------------ 809
+ +E + LV E G L D L+ D ++V K
Sbjct: 94 YEV-----YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE 148
Query: 810 ------------LSLIQRM----NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM 853
L +QR NI + SA+ YLH+ + H D+KP N L +
Sbjct: 149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNK 205
Query: 854 VAHVG--DFGLAK 864
+ DFGL+K
Sbjct: 206 SFEIKLVDFGLSK 218
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 26/168 (15%)
Query: 713 IGQGRFGTVYKG-ILGDDEMV----VAVKVINLKQKGAS----KSFVSECEALRNI-RHR 762
+G+G FG V + G D+ VAVK++ ++GA+ ++ +SE + L +I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 91
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRK------LSLIQRM 816
N++ ++ C+ G +V E+ + G+L +L ++ K L+L +
Sbjct: 92 NVVNLLGACTKP---GGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ VA +E+L +H DL N+LL V + DFGLA+
Sbjct: 148 CYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 23/159 (14%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEAL-RNIRHRNLIKIITIC 771
IG G + + + M AVKVI+ ++ S+ E E L R +H N+I + +
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE----EIEILLRYGQHPNIITLKDV- 89
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
++ LV E M G L D + + E R+ S + + +EYLH
Sbjct: 90 ----YDDGKHVYLVTELMRGGELLDKILRQKFFSE-REASFVLHT-----IGKTVEYLHS 139
Query: 832 HCQPPMVHGDLKPSNVLLDYD----MVAHVGDFGLAKFL 866
+VH DLKPSN+L + + DFG AK L
Sbjct: 140 QG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 16/156 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKG---ASKSFVSECEALRNIRHRNLIKIIT 769
+G G +G+V VAVK ++ + A +++ E L++++H N+I ++
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGLLD 86
Query: 770 ICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + +T E DF + G+ N+ V+ + LS + + ++Y
Sbjct: 87 VFTPATSIE--DFSEVYLVTTLMGA------DLNNIVKCQALSDEHVQFLVYQLLRGLKY 138
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+H ++H DLKPSNV ++ D + DFGLA+
Sbjct: 139 IH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR 171
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 36/199 (18%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNL 764
+F + +G G G V K +++A K+I+L+ K A+RN R L
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIK----------PAIRNQIIREL 65
Query: 765 IKIITICSS---TDFEGVDFK----ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMN 817
+++ C+S F G + ++ E+M+ GSL+ L ++ E ++ +++
Sbjct: 66 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPE----EILGKVS 120
Query: 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKT 877
IA V + YL Q ++H D+KPSN+L++ + DFG++ L +
Sbjct: 121 IA--VLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--------- 167
Query: 878 PSSSIGIKGTVGYVAPGKF 896
S + GT Y+AP +
Sbjct: 168 -SMANSFVGTRSYMAPERL 185
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Query: 712 MIGQGRFGTVYKGILGDDEMVVAVKVIN---LKQKGASKSFVSECEALRNIRHRNLIKII 768
+G+G F ++ D + V A K++ L + + E R++ H++++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
FE DF +V E SL + LH+ + + R + +Y
Sbjct: 82 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-----QIVLGCQY 130
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
LH + ++H DLK N+ L+ D+ +GDFGLA
Sbjct: 131 LHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + F
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGF 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+F + +G G G V+K +V+A K+I+L+ K A+RN R L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL- 55
Query: 766 KIITICSS---TDFEGVDFK----ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+++ C+S F G + ++ E+M+ GSL+ L ++ E ++ +++I
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 111
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
A V + YL + ++H D+KPSN+L++ + DFG++
Sbjct: 112 A--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 16/156 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKG---ASKSFVSECEALRNIRHRNLIKIIT 769
+G G +G+V VAVK ++ + A +++ E L++++H N+I ++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGLLD 94
Query: 770 ICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + +T E DF + G+ N+ V+ + LS + + ++Y
Sbjct: 95 VFTPATSIE--DFSEVYLVTTLMGA------DLNNIVKCQALSDEHVQFLVYQLLRGLKY 146
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+H ++H DLKPSNV ++ D + DFGLA+
Sbjct: 147 IH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 40/209 (19%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITI 770
+G G +G V + G VA+K + + + +K E L+++RH N+I ++ +
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 771 CSST----DFEGVDFKALVFEYM--ENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS 824
+ DF DF LV +M + G L D+++ L+ +M
Sbjct: 93 FTPDETLDDF--TDF-YLVMPFMGTDLGKLMKHEKLGEDRIQF----LVYQM------LK 139
Query: 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGI 884
+ Y+H ++H DLKP N+ ++ D + DFGLA+ + S G
Sbjct: 140 GLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----------QADSEMXGX 185
Query: 885 KGTVGYVAPGKF--FMLYTH---IPSFSC 908
T Y AP +M YT I S C
Sbjct: 186 VVTRWYRAPEVILNWMRYTQTVDIWSVGC 214
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+F + +G G G V+K +V+A K+I+L+ K A+RN R L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL- 55
Query: 766 KIITICSS---TDFEGVDFK----ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+++ C+S F G + ++ E+M+ GSL+ L ++ E ++ +++I
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 111
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
A V + YL + ++H D+KPSN+L++ + DFG++
Sbjct: 112 A--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+F + +G G G V+K +V+A K+I+L+ K A+RN R L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL- 55
Query: 766 KIITICSS---TDFEGVDFK----ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+++ C+S F G + ++ E+M+ GSL+ L ++ E ++ +++I
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 111
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
A V + YL + ++H D+KPSN+L++ + DFG++
Sbjct: 112 A--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 18/117 (15%)
Query: 784 LVFEYMENGSL----EDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVH 839
+++EYMEN S+ E + + + +I+ I V ++ Y+H+ + + H
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIK--CIIKSVLNSFSYIHN--EKNICH 175
Query: 840 GDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF 896
D+KPSN+L+D + + DFG ++++ + + G +GT ++ P F
Sbjct: 176 RDVKPSNILMDKNGRVKLSDFGESEYMVDKKIK----------GSRGTYEFMPPEFF 222
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + D
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDA 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR-HRNLIKIIT 769
++ +G F VY+ A+K + ++ +++ + E ++ + H N+++ +
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 770 ICSSTDFEGVDFKA--LVFEYMENGSLEDWLHQSNDQVEVR-KLSLIQRMNIAIDVASAI 826
S E +A L+ + G L ++L ++E R LS + I A+
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFL----KKMESRGPLSCDTVLKIFYQTCRAV 149
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869
+++H +PP++H DLK N+LL + DFG A +S++
Sbjct: 150 QHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHY 191
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 517 LKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSN 576
L+NL LD+S Q + P ++ SL+ L++S N+F+ + ++ L S++ L+ S N
Sbjct: 174 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 233
Query: 577 NL 578
++
Sbjct: 234 HI 235
Score = 30.0 bits (66), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 517 LKNLVMLDISSNQF-SGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSS 575
L +L +L ++ N F +P + +L +LD+S + P +F L S++ LN+S
Sbjct: 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 208
Query: 576 NNL 578
NN
Sbjct: 209 NNF 211
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 38.5 bits (88), Expect = 0.018, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 348 SSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGI-RNLVNLITFTLEV 406
++ ++L L DNQ P +L + + EL +G NQ+ G +P G+ +L L L
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSL-INLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGT 97
Query: 407 NQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIP 462
NQ V L +L++L + N L +P G+ LT L L L N L+ +IP
Sbjct: 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIP 151
Score = 38.1 bits (87), Expect = 0.024, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 382 RNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGL 441
R++ ++P GI N L NQ P V L NL++L + +N L G +P G+
Sbjct: 27 RSKRHASVPAGIPT--NAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGV 83
Query: 442 -GNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSIT 493
+LT+L LDLG+N L + +L NKLT +LP+ + +T
Sbjct: 84 FDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLT 135
Score = 30.8 bits (68), Expect = 3.2, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 13/68 (19%)
Query: 245 SSVELIFLTENRFSGIFP--FDILLNLPNLKKLGIGGNNFVGSIP----DSLSNASNLEL 298
++ ++++L +N+ + + P FD L+NL K+L +G N +G++P DSL + L +
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLINL---KELYLGSNQ-LGALPVGVFDSL---TQLTV 92
Query: 299 LDLPSNQF 306
LDL +NQ
Sbjct: 93 LDLGTNQL 100
Score = 30.0 bits (66), Expect = 5.8, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 348 SSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVN 407
+ L VL L NQ LP ++ + + + EL + N+++ +P GI L +L L+ N
Sbjct: 88 TQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQN 145
Query: 408 QFHGTIPDVISELKNLQQLSVFNN 431
Q L +L +F N
Sbjct: 146 QLKSIPHGAFDRLSSLTHAYLFGN 169
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+G+G +G VYK D + + ++ G S S E LR ++H N+I + +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRM--NIAIDVASAIEYLH 830
S V L+F+Y E+ + + + L + M ++ + I YLH
Sbjct: 89 SHADRKV---WLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 145
Query: 831 HHCQPPMVHGDLKPSNVLL 849
+ ++H DLKP+N+L+
Sbjct: 146 ANW---VLHRDLKPANILV 161
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 28/170 (16%)
Query: 713 IGQGRFGTVYKG-ILGDDEMV----VAVKVINLKQKGAS----KSFVSECEALRNI-RHR 762
+G+G FG V + G D+ VAVK++ ++GA+ ++ +SE + L +I H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 93
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRK--------LSLIQ 814
N++ ++ C+ G +V E+ + G+L +L ++ K L+L
Sbjct: 94 NVVNLLGACTKP---GGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEH 149
Query: 815 RMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + VA +E+L +H DL N+LL V + DFGLA+
Sbjct: 150 LIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + D
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDR 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 713 IGQGRFGTV---YKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKI 767
IG G G V Y +L + VA+K ++ + + +K E ++ + H+N+I +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 768 ITICSST----DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DV 822
+ + + +F+ V LV E M + +L + D +RM+ + +
Sbjct: 89 LNVFTPQKTLEEFQDV---YLVMELM-DANLXQVIQMELDH---------ERMSYLLYQM 135
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
I++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 136 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 517 LKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSN 576
L+NL LD+S Q + P ++ SL+ L++S N+F+ + ++ L S++ L+ S N
Sbjct: 493 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 552
Query: 577 NL 578
++
Sbjct: 553 HI 554
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 417 ISELKNLQQLSVFNNFLRG-GIPSGLGNLTKLGSLDLGSNSLQG 459
I LK L++L+V +N ++ +P NLT L LDL SN +Q
Sbjct: 144 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 517 LKNLVMLDISSNQF-SGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSS 575
L +L +L ++ N F +P + +L +LD+S + P +F L S++ LN+S
Sbjct: 468 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 527
Query: 576 NNL 578
NN
Sbjct: 528 NNF 530
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 20/169 (11%)
Query: 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNI 759
K + ++IG+G +G VY + VA+K +N + K + E L +
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRK----LSLIQR 815
+ +I++ + D D +V E ++ D ++ K L+
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLEIADS-----------DLKKLFKTPIFLTEQHV 133
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
I ++ +++H + ++H DLKP+N LL+ D + DFGLA+
Sbjct: 134 KTILYNLLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+F + +G G G V+K +V+A K+I+L+ K A+RN R L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL- 55
Query: 766 KIITICSS---TDFEGVDFK----ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+++ C+S F G + ++ E+M+ GSL+ L ++ E ++ +++I
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 111
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
A V + YL + ++H D+KPSN+L++ + DFG++
Sbjct: 112 A--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 16/156 (10%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKG---ASKSFVSECEALRNIRHRNLIKIIT 769
+G G +G+V VAVK ++ + A +++ E L++++H N+I ++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGLLD 94
Query: 770 ICS-STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
+ + +T E DF + G+ N+ V+ + LS + + ++Y
Sbjct: 95 VFTPATSIE--DFSEVYLVTTLMGA------DLNNIVKSQALSDEHVQFLVYQLLRGLKY 146
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+H ++H DLKPSNV ++ D + DFGLA+
Sbjct: 147 IH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+F + +G G G V+K +V+A K+I+L+ K A+RN R L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL- 55
Query: 766 KIITICSS---TDFEGVDFK----ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+++ C+S F G + ++ E+M+ GSL+ L ++ E ++ +++I
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 111
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
A V + YL + ++H D+KPSN+L++ + DFG++
Sbjct: 112 A--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 335 ANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGI- 393
N L + L ++L L L+ NQ LP+ + + + EL + NQ+ ++P G+
Sbjct: 72 GNKLHDISALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQ-SLPDGVF 129
Query: 394 RNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGL-GNLTKLGSLDL 452
L NL L NQ V +L NL +L + NN L+ +P G+ LT+L L L
Sbjct: 130 DKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQ-SLPEGVFDKLTQLKQLSL 188
Query: 453 GSNSLQ 458
N L+
Sbjct: 189 NDNQLK 194
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 348 SSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGI-RNLVNLITFTLEV 406
++LK L L +NQ LP + + + L + NQ+ ++P G+ L NL L+
Sbjct: 109 TNLKELVLVENQLQS-LPDGVFDKLTNLTYLYLYHNQLQ-SLPKGVFDKLTNLTRLDLDN 166
Query: 407 NQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGL 441
NQ V +L L+QLS+ +N L+ +P G+
Sbjct: 167 NQLQSLPEGVFDKLTQLKQLSLNDNQLK-SVPDGV 200
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+F + +G G G V+K +V+A K+I+L+ K A+RN R L
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL- 58
Query: 766 KIITICSS---TDFEGVDFK----ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+++ C+S F G + ++ E+M+ GSL+ L ++ E ++ +++I
Sbjct: 59 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 114
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
A V + YL + ++H D+KPSN+L++ + DFG++
Sbjct: 115 A--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 155
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+V EYM G + L + + + S A + EYLH +++ DLK
Sbjct: 118 MVMEYMPGGDMFSHLRR------IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
P N+L+D V DFG AK + + + GT Y+AP
Sbjct: 169 PENLLIDQQGYIKVADFGFAK-----------RVKGRTWXLCGTPEYLAP 207
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y +L + VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 36 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVF 92
Query: 772 SST----DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
+ +F+ V LV E M + +L + D +RM+ + + I
Sbjct: 93 TPQKTLEEFQDV---YLVMELM-DANLXQVIQMELDH---------ERMSYLLYQMLCGI 139
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+F + +G G G V+K +V+A K+I+L+ K A+RN R L
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL- 74
Query: 766 KIITICSS---TDFEGVDFK----ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+++ C+S F G + ++ E+M+ GSL+ L ++ E ++ +++I
Sbjct: 75 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 130
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
A V + YL + ++H D+KPSN+L++ + DFG++
Sbjct: 131 A--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 517 LKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSN 576
L+NL LD+S Q + P ++ SL+ L++S N+F+ + ++ L S++ L+ S N
Sbjct: 469 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 528
Query: 577 NL 578
++
Sbjct: 529 HI 530
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 417 ISELKNLQQLSVFNNFLRG-GIPSGLGNLTKLGSLDLGSNSLQG 459
I LK L++L+V +N ++ +P NLT L LDL SN +Q
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 517 LKNLVMLDISSNQF-SGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSS 575
L +L +L ++ N F +P + +L +LD+S + P +F L S++ LN+S
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 503
Query: 576 NNL 578
NN
Sbjct: 504 NNF 506
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 30/200 (15%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+G G FG V++ A K + + ++ E + + +RH L+ +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL----- 219
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
FE + +++E+M G L + D E K+S + + V + ++H +
Sbjct: 220 HDAFEDDNEMVMIYEFMSGGEL---FEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVG--DFGLAKFLSNHHLDIASKTPSSSIGI-KGTVG 889
VH DLKP N++ + DFGL HLD P S+ + GT
Sbjct: 275 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTA-----HLD-----PKQSVKVTTGTAE 321
Query: 890 YVAP----GKFFMLYTHIPS 905
+ AP GK YT + S
Sbjct: 322 FAAPEVAEGKPVGYYTDMWS 341
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+V EYM G + L + + + S A + EYLH +++ DLK
Sbjct: 118 MVMEYMPGGDMFSHLRR------IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
P N+L+D V DFG AK + + + GT Y+AP
Sbjct: 169 PENLLIDQQGYIKVADFGFAK-----------RVKGRTWXLCGTPEYLAP 207
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI 765
+F + +G G G V+K +V+A K+I+L+ K A+RN R L
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL- 82
Query: 766 KIITICSS---TDFEGVDFK----ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
+++ C+S F G + ++ E+M+ GSL+ L ++ E ++ +++I
Sbjct: 83 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 138
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863
A V + YL + ++H D+KPSN+L++ + DFG++
Sbjct: 139 A--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 179
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 12/75 (16%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A ++ +E LH +V+ DLKP N+LLD + D GLA +
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-------- 340
Query: 879 SSSIGIKGTVGYVAP 893
+ G GTVGY+AP
Sbjct: 341 -TIKGRVGTVGYMAP 354
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 680 HKSVDTSPMEKLFPMVSYAELSKATSEFSSSNM-----IGQGRFGTVYKG-ILGDDEMVV 733
H D P+++ + Y + EF + +G+G FG V + G D+
Sbjct: 1 HMDPDELPLDEHCERLPY---DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTAT 57
Query: 734 AVKV-INLKQKGAS----KSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKALVFE 787
V + + ++GA+ ++ +SE + L +I H N++ ++ C+ G +V E
Sbjct: 58 CRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-E 113
Query: 788 YMENGSLEDWLHQSNDQVEVRK---------LSLIQRMNIAIDVASAIEYLHHHCQPPMV 838
+ + G+L +L ++ K L+L + + VA +E+L +
Sbjct: 114 FCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCI 170
Query: 839 HGDLKPSNVLLDYDMVAHVGDFGLAK 864
H DL N+LL V + DFGLA+
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 12/75 (16%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A ++ +E LH +V+ DLKP N+LLD + D GLA +
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-------- 340
Query: 879 SSSIGIKGTVGYVAP 893
+ G GTVGY+AP
Sbjct: 341 -TIKGRVGTVGYMAP 354
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V + VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + D
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDG 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
GLA+ T G T Y AP
Sbjct: 170 GLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 30/200 (15%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+G G FG V++ A K + + ++ E + + +RH L+ +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA-- 116
Query: 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH 832
FE + +++E+M G L + D E K+S + + V + ++H +
Sbjct: 117 ---FEDDNEMVMIYEFMSGGEL---FEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 833 CQPPMVHGDLKPSNVLLDYDMVAHVG--DFGLAKFLSNHHLDIASKTPSSSIGI-KGTVG 889
VH DLKP N++ + DFGL HLD P S+ + GT
Sbjct: 169 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTA-----HLD-----PKQSVKVTTGTAE 215
Query: 890 YVAP----GKFFMLYTHIPS 905
+ AP GK YT + S
Sbjct: 216 FAAPEVAEGKPVGYYTDMWS 235
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 19/114 (16%)
Query: 756 LRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQR 815
L + H ++++I TD G +V EY+ SL+ +S Q KL + +
Sbjct: 133 LAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK----RSKGQ----KLPVAEA 184
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL--------DYDMVAHVGDFG 861
+ +++ A+ YLH +V+ DLKP N++L D V+ + FG
Sbjct: 185 IAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEEQLKLIDLGAVSRINSFG 235
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 25/187 (13%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICS 772
+G+G +G V K + AVK I ++ V+ E R + ++ C
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRI--------RATVNSQEQKRLLXDLDISXRTVDCP 93
Query: 773 ST-DFEGVDFK---ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828
T F G F+ + + + SL+ + Q D+ + ++ + IA+ + A+E+
Sbjct: 94 FTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALEH 151
Query: 829 LHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTV 888
LH ++H D+KPSNVL++ DFG++ +L + D+A + G
Sbjct: 152 LHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVD---DVAKDIDA------GCK 200
Query: 889 GYVAPGK 895
Y AP +
Sbjct: 201 PYXAPER 207
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y +L + VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 36 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 92
Query: 772 SST----DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
+ +F+ V LV E M + +L + D +RM+ + + I
Sbjct: 93 TPQKTLEEFQDV---YLVMELM-DANLXQVIQMELDH---------ERMSYLLYQMLXGI 139
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLXGTPEYLAP 207
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y +L + VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 29 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 85
Query: 772 SST----DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
+ +F+ V LV E M + +L + D +RM+ + + I
Sbjct: 86 TPQKTLEEFQDV---YLVMELM-DANLXQVIQMELDH---------ERMSYLLYQMLXGI 132
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 133 KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLAGTPEYLAP 207
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS-----KSFVSECEALRNIRH 761
+ +IG+G F V + I + AVK++++ + +S + E ++H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 762 RNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821
++++++ SS +G+ + +VFE+M+ L + + D V ++ +
Sbjct: 86 PHIVELLETYSS---DGMLY--MVFEFMDGADLCFEIVKRADAGFVYSEAVAS--HYMRQ 138
Query: 822 VASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDFGLA 863
+ A+ Y H + ++H D+KP NVLL + +GDFG+A
Sbjct: 139 ILEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVA 180
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 688 MEKLFPMVSYAELSKATSE----FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK 743
M + P EL+K E + + + +G G +G+V VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 744 GA--SKSFVSECEALRNIRHRNLIKIITICS-STDFEGVDFKALVFEYMENGSLEDWLHQ 800
+K E L++++H N+I ++ + + + E + LV M G+
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GA------D 112
Query: 801 SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860
N+ V+ +KL+ + + ++Y+H ++H DLKPSN+ ++ D + DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
LA+ T G T Y AP
Sbjct: 170 YLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 26/170 (15%)
Query: 713 IGQGRFGTVYKG-ILGDDEMVVAVKV-INLKQKGAS----KSFVSECEALRNI-RHRNLI 765
+G+G FG V + G D+ V + + ++GA+ ++ +SE + L +I H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRK----------LSLIQR 815
++ C+ G +V E+ + G+L +L ++ K L+L
Sbjct: 132 NLLGACTKP---GGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 816 MNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + VA +E+L C +H DL N+LL V + DFGLA+
Sbjct: 188 ICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 707 FSSSNMIGQGRFGTVY--KGILGDD-----EMVVAVKVINLKQKGASKSFVSECEALRNI 759
F ++G G +G V+ + I G D M V K +++ ++ +E + L +I
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
R + + T+ + L+ +Y+ G L L Q E + I
Sbjct: 116 RQSPFLVTLHYAFQTETK----LHLILDYINGGELFTHLSQRERFTE-------HEVQIY 164
Query: 820 I-DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
+ ++ A+E+LH + +++ D+K N+LLD + + DFGL+K + +
Sbjct: 165 VGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSK-------EFVADET 214
Query: 879 SSSIGIKGTVGYVAP 893
+ GT+ Y+AP
Sbjct: 215 ERAYDFCGTIEYMAP 229
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y +L + VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 36 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVF 92
Query: 772 SST----DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
+ +F+ V LV E M + +L + D +RM+ + + I
Sbjct: 93 TPQKTLEEFQDV---YLVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 139
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVI-NLKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
+G G FG V D++ AVKV+ N+K+ ++S E + L+ I++ ++ +
Sbjct: 43 MGDGTFGRVLLCQHIDNKKYYAVKVVRNIKK--YTRSAKIEADILKKIQNDDINNNNIVK 100
Query: 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH 831
F D L+FE + E + + + + L I++ A+ YL
Sbjct: 101 YHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLY-----CIEILKALNYLR- 154
Query: 832 HCQPPMVHGDLKPSNVLLD 850
+ + H DLKP N+LLD
Sbjct: 155 --KMSLTHTDLKPENILLD 171
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 713 IGQGRFGTV---YKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKI 767
IG G G V Y IL E VA+K ++ + + +K E ++ + H+N+I +
Sbjct: 32 IGSGAQGIVVAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 768 ITIC----SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DV 822
+ + S +F+ V +V E M + +L + D +RM+ + +
Sbjct: 89 LNVFTPQKSLEEFQDV---YIVMELM-DANLSQVIQMELDH---------ERMSYLLYQM 135
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
I++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 713 IGQGRFGTV---YKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKI 767
IG G G V Y IL E VA+K ++ + + +K E ++ + H+N+I +
Sbjct: 32 IGSGAQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 768 ITIC----SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DV 822
+ + S +F+ V +V E M + +L + D +RM+ + +
Sbjct: 89 LNVFTPQKSLEEFQDV---YIVMELM-DANLSQVIQMELDH---------ERMSYLLYQM 135
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
I++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 713 IGQGRFGTV---YKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKI 767
IG G G V Y IL E VA+K ++ + + +K E ++ + H+N+I +
Sbjct: 32 IGSGAQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 768 ITIC----SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DV 822
+ + S +F+ V +V E M + +L + D +RM+ + +
Sbjct: 89 LNVFTPQKSLEEFQDV---YIVMELM-DANLSQVIQMELDH---------ERMSYLLYQM 135
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
I++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 24/169 (14%)
Query: 713 IGQGRFGTVYKG-ILGDDEMVVAVKV-INLKQKGAS----KSFVSECEALRNI-RHRNLI 765
+G+G FG V + G D+ V + + ++GA+ ++ +SE + L +I H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRK----------LSLIQR 815
++ C+ G +V E+ + G+L +L ++ K L+L
Sbjct: 97 NLLGACTKP---GGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + VA +E+L +H DL N+LL V + DFGLA+
Sbjct: 153 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 198
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 24/169 (14%)
Query: 713 IGQGRFGTVYKG-ILGDDEMVVAVKV-INLKQKGAS----KSFVSECEALRNI-RHRNLI 765
+G+G FG V + G D+ V + + ++GA+ ++ +SE + L +I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRK----------LSLIQR 815
++ C+ G +V E+ + G+L +L ++ K L+L
Sbjct: 86 NLLGACTKP---GGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + VA +E+L +H DL N+LL V + DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 24/169 (14%)
Query: 713 IGQGRFGTVYKG-ILGDDEMVVAVKV-INLKQKGAS----KSFVSECEALRNI-RHRNLI 765
+G+G FG V + G D+ V + + ++GA+ ++ +SE + L +I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRK----------LSLIQR 815
++ C+ G +V E+ + G+L +L ++ K L+L
Sbjct: 95 NLLGACTKP---GGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + VA +E+L +H DL N+LL V + DFGLA+
Sbjct: 151 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y IL E VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 36 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 92
Query: 772 ----SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
S +F+ V +V E M + +L + D +RM+ + + I
Sbjct: 93 TPQKSLEEFQDV---YIVMELM-DANLSQVIQMELDH---------ERMSYLLYQMLCGI 139
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 20/110 (18%)
Query: 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+V EY+ G + L + + + S A + EYLH +++ DLK
Sbjct: 139 MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 189
Query: 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
P N+L+D V DFG AK + ++ + GT Y+AP
Sbjct: 190 PENLLIDQQGYIQVTDFGFAK-----------RVKGATWTLCGTPEYLAP 228
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 24/169 (14%)
Query: 713 IGQGRFGTVYKG-ILGDDEMVVAVKV-INLKQKGAS----KSFVSECEALRNI-RHRNLI 765
+G+G FG V + G D+ V + + ++GA+ ++ +SE + L +I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRK----------LSLIQR 815
++ C+ G +V E+ + G+L +L ++ K L+L
Sbjct: 95 NLLGACTKP---GGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + VA +E+L +H DL N+LL V + DFGLA+
Sbjct: 151 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 24/169 (14%)
Query: 713 IGQGRFGTVYKG-ILGDDEMVVAVKV-INLKQKGAS----KSFVSECEALRNI-RHRNLI 765
+G+G FG V + G D+ V + + ++GA+ ++ +SE + L +I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRK----------LSLIQR 815
++ C+ G +V E+ + G+L +L ++ K L+L
Sbjct: 95 NLLGACTKP---GGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + VA +E+L +H DL N+LL V + DFGLA+
Sbjct: 151 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 713 IGQGRFGTV---YKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKI 767
IG G G V Y IL E VA+K ++ + + +K E ++ + H+N+I +
Sbjct: 32 IGSGAQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 768 ITIC----SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DV 822
+ + S +F+ V +V E M + +L + D +RM+ + +
Sbjct: 89 LNVFTPQKSLEEFQDV---YIVMELM-DANLSQVIQMELDH---------ERMSYLLYQM 135
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
I++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y IL E VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 36 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 92
Query: 772 ----SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
S +F+ V +V E M + +L + D +RM+ + + I
Sbjct: 93 TPQKSLEEFQDV---YIVMELM-DANLSQVIQMELDH---------ERMSYLLYQMLCGI 139
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+++D V DFGLAK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 14/89 (15%)
Query: 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHG 840
+ A+V E + SLED + R SL + IAI + S +EY+H +++
Sbjct: 79 YNAMVLELL-GPSLEDLFDLCD-----RTFSLKTVLMIAIQLISRMEYVHSKN---LIYR 129
Query: 841 DLKPSNVLL-----DYDMVAHVGDFGLAK 864
D+KP N L+ V H+ DFGLAK
Sbjct: 130 DVKPENFLIGRPGNKTQQVIHIIDFGLAK 158
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 348 SSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGI-RNLVNLITFTLEV 406
SS L L N+ LPH + + ++ +LS+ +NQI ++P G+ L L L
Sbjct: 28 SSATRLELESNKLQS-LPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHE 85
Query: 407 NQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGL-GNLTKLGSLDLGSNSLQGNIP 462
N+ V +L L++L++ N L+ +P G+ LT L + L +N + P
Sbjct: 86 NKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 141
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 20/111 (18%)
Query: 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+V EY+ G + L + + + S A + EYLH +++ DLK
Sbjct: 118 MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPG 894
P N+L+D V DFG AK + + + GT Y+AP
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLCGTPEYLAPA 208
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 36.6 bits (83), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----------RVK 193
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 194 GRTWXLCGTPEYLAP 208
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 142 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 187
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 188 GRTWXLCGTPEYLAP 202
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 36.6 bits (83), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 36.6 bits (83), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 36.6 bits (83), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 65/166 (39%), Gaps = 22/166 (13%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRN------ 758
+F M+G+G FG V+ A+K LK+ EC +
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLA 75
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
H L + C+ E + F V EY+ G L + + K L +
Sbjct: 76 WEHPFLTHMF--CTFQTKENLFF---VMEYLNGGDLMYHIQSCH------KFDLSRATFY 124
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
A ++ +++LH +V+ DLK N+LLD D + DFG+ K
Sbjct: 125 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK 167
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+V EY+ G + L + + + S A + EYLH +++ DLK
Sbjct: 118 MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
P N+L+D V DFG AK + + + GT Y+AP
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLCGTPEYLAP 207
>pdb|1XEU|A Chain A, Crystal Structure Of Internalin C From Listeria
Monocytogenes
Length = 263
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 14/112 (12%)
Query: 348 SSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGT--IPPGIRNLVNLITFTLE 405
++LK L LS NQ P + +L+ K+ ELSV RN++ IP L L+
Sbjct: 63 TNLKELHLSHNQISDLSP--LKDLT-KLEELSVNRNRLKNLNGIPSAC-----LSRLFLD 114
Query: 406 VNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSL 457
N+ T D + LKNL+ LS+ NN L+ + LG L+KL LDL N +
Sbjct: 115 NNELRDT--DSLIHLKNLEILSIRNNKLKSIV--MLGFLSKLEVLDLHGNEI 162
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 14/89 (15%)
Query: 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHG 840
+ A+V E + SLED + R +L + IAI + S +EY+H +++
Sbjct: 71 YNAMVLELL-GPSLEDLFDLCD-----RTFTLKTVLMIAIQLLSRMEYVHSKN---LIYR 121
Query: 841 DLKPSNVLL-----DYDMVAHVGDFGLAK 864
D+KP N L+ + V H+ DFGLAK
Sbjct: 122 DVKPENFLIGRQGNKKEHVIHIIDFGLAK 150
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y +L + VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 74 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 130
Query: 772 SST----DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
+ +F+ V LV E M + +L + D +RM+ + + I
Sbjct: 131 TPQKTLEEFQDV---YLVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 177
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 178 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+V EY+ G + L + + + S A + EYLH +++ DLK
Sbjct: 118 MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
P N+L+D V DFG AK + + + GT Y+AP
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLCGTPEYLAP 207
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+V EY+ G + L + + + S A + EYLH +++ DLK
Sbjct: 118 MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
P N+L+D V DFG AK + + + GT Y+AP
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLCGTPEYLAP 207
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+V EY+ G + L + + + S A + EYLH +++ DLK
Sbjct: 118 MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
P N+L+D V DFG AK + + + GT Y+AP
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLCGTPEYLAP 207
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+V EY+ G + L + + + S A + EYLH +++ DLK
Sbjct: 119 MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 169
Query: 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
P N+L+D V DFG AK + + + GT Y+AP
Sbjct: 170 PENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLCGTPEYLAP 208
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 335 ANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGI- 393
N L + L ++L L L+ NQ LP+ + + + EL + NQ+ ++P G+
Sbjct: 72 GNKLHDISALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQ-SLPDGVF 129
Query: 394 RNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGL-GNLTKLGSLDL 452
L NL L NQ V +L NL +L + N L+ +P G+ LT+L L L
Sbjct: 130 DKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRL 188
Query: 453 GSNSLQ 458
N L+
Sbjct: 189 YQNQLK 194
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 69/182 (37%), Gaps = 12/182 (6%)
Query: 378 LSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGI 437
L++G N++ ++ L NL L NQ V +L NL++L + N L+ +
Sbjct: 68 LALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SL 124
Query: 438 PSGL-GNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTXX 496
P G+ LT L L+L N LQ NL SYN+L LP+ + T
Sbjct: 125 PDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LPEGVFDKLTQL 183
Query: 497 XXXXXXXXXXXXXXXXQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYG 556
L +L + + N + TC + YL IN G
Sbjct: 184 KDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD-------CTCPGIRYLSEWINKHSG 236
Query: 557 VI 558
V+
Sbjct: 237 VV 238
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Query: 348 SSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGI-RNLVNLITFTLEV 406
++LK L L +NQ LP + + + L++ NQ+ ++P G+ L NL L
Sbjct: 109 TNLKELVLVENQLQS-LPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSY 166
Query: 407 NQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGL-GNLTKLGSLDLGSNSLQGNIP 462
NQ V +L L+ L ++ N L+ +P G+ LT L + L N P
Sbjct: 167 NQLQSLPEGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+V EY+ G + L + + + S A + EYLH +++ DLK
Sbjct: 118 MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
P N+L+D V DFG AK + + + GT Y+AP
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLCGTPEYLAP 207
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 36.2 bits (82), Expect = 0.081, Method: Composition-based stats.
Identities = 48/210 (22%), Positives = 74/210 (35%), Gaps = 15/210 (7%)
Query: 346 NCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLE 405
+CSS K+ ++ N +P L L+ N++S L L L
Sbjct: 22 DCSSKKLTAIPSN-----IPADTKKLDLQ-------SNKLSSLPSKAFHRLTKLRLLYLN 69
Query: 406 VNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGL-GNLTKLGSLDLGSNSLQGNIPSS 464
N+ + ELKNL+ L V +N L+ +P G+ L L L L N L+ P
Sbjct: 70 DNKLQTLPAGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRV 128
Query: 465 LGNCQNLILFIASYNKLTGDLPQQLLSITTXXXXXXXXXXXXXXXXXXQVGNLKNLVMLD 524
+ L YN+L LP+ + T L L L
Sbjct: 129 FDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLK 187
Query: 525 ISSNQFSGVIPVTLSTCVSLEYLDISINSF 554
+ +NQ V + L+ L + N +
Sbjct: 188 LDNNQLKRVPEGAFDSLEKLKMLQLQENPW 217
Score = 30.8 bits (68), Expect = 3.6, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 51/148 (34%), Gaps = 4/148 (2%)
Query: 436 GIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTX 495
IPS + TK LDL SN L + L L + NKL LP +
Sbjct: 30 AIPSNIPADTK--KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKN 86
Query: 496 XXXXXXXXXXXXXXXXXQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFY 555
L NL L + NQ + P + L YL + N
Sbjct: 87 LETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ 146
Query: 556 GVIPLSFRFLKSIKALNVSSNNLSGKIP 583
+ F L S+K L + +N L ++P
Sbjct: 147 SLPKGVFDKLTSLKELRLYNNQLK-RVP 173
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 24/169 (14%)
Query: 713 IGQGRFGTVYKG-ILGDDEMVVAVKV-INLKQKGAS----KSFVSECEALRNI-RHRNLI 765
+G+G FG V + G D+ V + + ++GA+ ++ +SE + L +I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRK----------LSLIQR 815
++ C+ + ++ E+ + G+L +L ++ K L+L
Sbjct: 86 NLLGACTKPGGPLM----VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + VA +E+L +H DL N+LL V + DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+++D V DFGLAK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 133 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 178
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 179 GRTWTLCGTPEYLAP 193
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 134 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----------RVK 179
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 180 GRTWXLCGTPEYLAP 194
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 185
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 186 GRTWXLCGTPEYLAP 200
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+V EY+ G + L + + + S A + EYLH +++ DLK
Sbjct: 118 MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
P N+L+D V DFG AK + + + GT Y+AP
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLCGTPEYLAP 207
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 193
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 194 GRTWXLCGTPEYLAP 208
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 185
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 186 GRTWXLCGTPEYLAP 200
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 193
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 194 GRTWXLCGTPEYLAP 208
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+V EY+ G + L + + + S A + EYLH +++ DLK
Sbjct: 118 MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
P N+L+D V DFG AK + + + GT Y+AP
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLCGTPEYLAP 207
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 36.2 bits (82), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y +L + VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 30 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 86
Query: 772 SST----DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
+ +F+ V LV E M + +L + D +RM+ + + I
Sbjct: 87 TPQKTLEEFQDV---YLVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 133
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 134 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 36.2 bits (82), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 36.2 bits (82), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y +L + VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 29 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 85
Query: 772 SST----DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
+ +F+ V LV E M + +L + D +RM+ + + I
Sbjct: 86 TPQKTLEEFQDV---YLVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 132
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 133 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 36.2 bits (82), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 193
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 194 GRTWXLCGTPEYLAP 208
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 36.2 bits (82), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 193
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 194 GRTWXLCGTPEYLAP 208
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 36.2 bits (82), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y +L + VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 35 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 91
Query: 772 SST----DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
+ +F+ V LV E M + +L + D +RM+ + + I
Sbjct: 92 TPQKTLEEFQDV---YLVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 138
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 139 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 36.2 bits (82), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y +L + VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 36 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 92
Query: 772 SST----DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
+ +F+ V LV E M + +L + D +RM+ + + I
Sbjct: 93 TPQKTLEEFQDV---YLVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 139
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 36.2 bits (82), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y +L + VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 37 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 93
Query: 772 SST----DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
+ +F+ V LV E M + +L + D +RM+ + + I
Sbjct: 94 TPQKTLEEFQDV---YLVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 140
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 141 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y +L + VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 37 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 93
Query: 772 SST----DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
+ +F+ V LV E M + +L + D +RM+ + + I
Sbjct: 94 TPQKTLEEFQDV---YLVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 140
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 141 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 24/169 (14%)
Query: 713 IGQGRFGTVYKG-ILGDDEMVVAVKV-INLKQKGAS----KSFVSECEALRNI-RHRNLI 765
+G+G FG V + G D+ V + + ++GA+ ++ +SE + L +I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRK----------LSLIQR 815
++ C+ + ++ E+ + G+L +L ++ K L+L
Sbjct: 86 NLLGACTKPGGPLM----VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + VA +E+L +H DL N+LL V + DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 193
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 194 GRTWTLCGTPEYLAP 208
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 193
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 194 GRTWXLCGTPEYLAP 208
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 36.2 bits (82), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 36.2 bits (82), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y +L + VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 74 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 130
Query: 772 SST----DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
+ +F+ V LV E M + +L + D +RM+ + + I
Sbjct: 131 TPQKTLEEFQDV---YLVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 177
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 178 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 32/177 (18%)
Query: 697 YAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEAL 756
Y + + ++ F + IG+G F +VY + A + ++K A K + +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVY--------LATAQLQVGPEEKIALKHLIPTSHPI 64
Query: 757 RNIRHRNLIKIITICSSTD--------FEGVDFKALVFEYMENGSLEDWLHQSNDQVEVR 808
R ++ +T+ D F D + Y+E+ S D L+ + Q EVR
Sbjct: 65 RIAAE---LQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQ-EVR 120
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAH-VGDFGLAK 864
+ L ++ A++ +H Q +VH D+KPSN L + + + + DFGLA+
Sbjct: 121 EYML--------NLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y +L + VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 36 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 92
Query: 772 SST----DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
+ +F+ V LV E M + +L + D +RM+ + + I
Sbjct: 93 TPQKTLEEFQDV---YLVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 139
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y +L + VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 30 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 86
Query: 772 SST----DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
+ +F+ V LV E M + +L + D +RM+ + + I
Sbjct: 87 TPQKTLEEFQDV---YLVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 133
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 134 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 36.2 bits (82), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 36.2 bits (82), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+V EY+ G + L + + + S A + EYLH +++ DLK
Sbjct: 139 MVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 189
Query: 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
P N+L+D V DFG AK + + + GT Y+AP
Sbjct: 190 PENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLCGTPEYLAP 228
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 36.2 bits (82), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y IL E VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 36 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 92
Query: 772 ----SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
S +F+ V +V E M + +L + D +RM+ + + I
Sbjct: 93 TPQKSLEEFQDV---YIVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 139
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 36.2 bits (82), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSE---CEALRNIRHRNLIKIIT 769
+G+G F K + AVK+I+ + + ++ ++ CE H N++K+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG-----HPNIVKLHE 73
Query: 770 ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYL 829
+ F LV E + G L + + + E +++++ SA+ ++
Sbjct: 74 V-----FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKL------VSAVSHM 122
Query: 830 HHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDFGLAKF 865
H +VH DLKP N+L + ++ + DFG A+
Sbjct: 123 H---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 24/169 (14%)
Query: 713 IGQGRFGTVYKG-ILGDDEMVVAVKV-INLKQKGAS----KSFVSECEALRNI-RHRNLI 765
+G+G FG V + G D+ V + + ++GA+ ++ +SE + L +I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRK----------LSLIQR 815
++ C+ + ++ E+ + G+L +L ++ K L+L
Sbjct: 86 NLLGACTKPGGPLM----VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 816 MNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
+ + VA +E+L +H DL N+LL V + DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 35.8 bits (81), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 92/229 (40%), Gaps = 29/229 (12%)
Query: 689 EKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKS 748
EKL P V Y E + + +G+G FG V++ AVK + L+
Sbjct: 44 EKLKP-VDY-EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE------- 94
Query: 749 FVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVR 808
V E L + +I+ + + EG + + E +E GSL + Q E R
Sbjct: 95 -VFRVEELVACAGLSSPRIVPLYGAVR-EG-PWVNIFMELLEGGSLGQLIKQMGCLPEDR 151
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFLS 867
L + + +EYLH ++HGD+K NVLL D A + DFG A L
Sbjct: 152 ALYYLGQ------ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202
Query: 868 NHHLDIASKTPSSSIGIKGTVGYVAP----GKFFMLYTHIPSFSCTNVH 912
D K+ + I GT ++AP GK I S C +H
Sbjct: 203 P---DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLH 248
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 213
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 214 GRTWXLCGTPEYLAP 228
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y IL E VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 41 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 97
Query: 772 ----SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
S +F+ V +V E M + +L + D +RM+ + + I
Sbjct: 98 TPQKSLEEFQDV---YIVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 144
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 145 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y IL E VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 30 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 86
Query: 772 ----SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
S +F+ V +V E M + +L + D +RM+ + + I
Sbjct: 87 TPQKSLEEFQDV---YIVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 133
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 134 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y IL E VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 36 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 92
Query: 772 ----SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
S +F+ V +V E M + +L + D +RM+ + + I
Sbjct: 93 TPQKSLEEFQDV---YIVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 139
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y IL E VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 36 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 92
Query: 772 ----SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
S +F+ V +V E M + +L + D +RM+ + + I
Sbjct: 93 TPQKSLEEFQDV---YIVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 139
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y IL E VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 36 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 92
Query: 772 ----SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
S +F+ V +V E M + +L + D +RM+ + + I
Sbjct: 93 TPQKSLEEFQDV---YIVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 139
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y IL E VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 37 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 93
Query: 772 ----SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
S +F+ V +V E M + +L + D +RM+ + + I
Sbjct: 94 TPQKSLEEFQDV---YIVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 140
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 141 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y IL E VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 36 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 92
Query: 772 ----SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
S +F+ V +V E M + +L + D +RM+ + + I
Sbjct: 93 TPQKSLEEFQDV---YIVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 139
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 92/229 (40%), Gaps = 29/229 (12%)
Query: 689 EKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKS 748
EKL P V Y E + + +G+G FG V++ AVK + L+
Sbjct: 58 EKLKP-VDY-EYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLE------- 108
Query: 749 FVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVR 808
V E L + +I+ + + EG + + E +E GSL + Q E R
Sbjct: 109 -VFRVEELVACAGLSSPRIVPLYGAVR-EG-PWVNIFMELLEGGSLGQLIKQMGCLPEDR 165
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFLS 867
L + + +EYLH ++HGD+K NVLL D A + DFG A L
Sbjct: 166 ALYYLGQ------ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 216
Query: 868 NHHLDIASKTPSSSIGIKGTVGYVAP----GKFFMLYTHIPSFSCTNVH 912
D K+ + I GT ++AP GK I S C +H
Sbjct: 217 P---DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLH 262
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 92/229 (40%), Gaps = 29/229 (12%)
Query: 689 EKLFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKS 748
EKL P V Y E + + +G+G FG V++ AVK + L+
Sbjct: 60 EKLKP-VDY-EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE------- 110
Query: 749 FVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVR 808
V E L + +I+ + + EG + + E +E GSL + Q E R
Sbjct: 111 -VFRVEELVACAGLSSPRIVPLYGAVR-EG-PWVNIFMELLEGGSLGQLIKQMGCLPEDR 167
Query: 809 KLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLAKFLS 867
L + + +EYLH ++HGD+K NVLL D A + DFG A L
Sbjct: 168 ALYYLGQ------ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 218
Query: 868 NHHLDIASKTPSSSIGIKGTVGYVAP----GKFFMLYTHIPSFSCTNVH 912
D K+ + I GT ++AP GK I S C +H
Sbjct: 219 P---DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLH 264
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 714 GQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITIC 771
QG Y IL E VA+K ++ + + +K E ++ + H+N+I ++ +
Sbjct: 38 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 94
Query: 772 ----SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-DVASAI 826
S +F+ V +V E M + +L + D +RM+ + + I
Sbjct: 95 TPQKSLEEFQDV---YIVMELM-DANLCQVIQMELDH---------ERMSYLLYQMLCGI 141
Query: 827 EYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 142 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 176
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 838 VHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF 896
H D+KP N+L+ D A++ DFG+A ++ L T GT+ Y AP +F
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT-------VGTLYYXAPERF 207
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 65/166 (39%), Gaps = 22/166 (13%)
Query: 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRN------ 758
+F M+G+G FG V+ A+K LK+ EC +
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLA 74
Query: 759 IRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNI 818
H L + C+ E + F V EY+ G L + + K L +
Sbjct: 75 WEHPFLTHMF--CTFQTKENLFF---VMEYLNGGDLMYHIQSCH------KFDLSRATFY 123
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
A ++ +++LH +V+ DLK N+LLD D + DFG+ K
Sbjct: 124 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK 166
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 82/194 (42%), Gaps = 29/194 (14%)
Query: 707 FSSSNMIGQGRFGTVY--KGILGDD-----EMVVAVKVINLKQKGASKSFVSECEALRNI 759
F ++G+G +G V+ + + G + M V K + ++ + +E L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+H ++ +I F+ L+ EY+ G L L + +E + +++A
Sbjct: 79 KHPFIVDLIYA-----FQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPS 879
L H Q +++ DLKP N++L++ + DFGL K + H + T
Sbjct: 134 ---------LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHT-- 180
Query: 880 SSIGIKGTVGYVAP 893
GT+ Y+AP
Sbjct: 181 ----FCGTIEYMAP 190
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+++D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 22/99 (22%)
Query: 814 QRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDM----------------V 854
Q ++A + A+++LH + H DLKP N+L DY++
Sbjct: 138 QVRHMAFQLCQAVKFLH---DNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTA 194
Query: 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
V DFG A F HH I S + + +G+ P
Sbjct: 195 VRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQP 233
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Query: 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+V EY+ G + L + + + S A + EYLH +++ DLK
Sbjct: 118 MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 844 PSNVLLDYDMVAHVGDFGLAK 864
P N+L+D V DFG AK
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK 189
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 17/162 (10%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNL 764
+ S +G G +G+V I VA+K ++ + + +K E L++++H N+
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 85
Query: 765 IKIITIC--SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
I ++ + +S+ DF LV +M+ ++ K S + + +
Sbjct: 86 IGLLDVFTPASSLRNFYDF-YLVMPFMQTDL---------QKIMGLKFSEEKIQYLVYQM 135
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++Y+H +VH DLKP N+ ++ D + DFGLA+
Sbjct: 136 LKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843
+V EY+ G + L + + + S A + EYLH +++ DLK
Sbjct: 118 MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
P N+++D V DFG AK + + + GT Y+AP
Sbjct: 169 PENLIIDQQGYIQVTDFGFAK-----------RVKGRTWXLCGTPEYLAP 207
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 700 LSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN---LKQKGASKSFVSECEAL 756
L ++ +IG+G FG V + V A+K+++ + ++ S F E + +
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 757 RNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRM 816
++++ C+ F+ + +V EYM G L + + SN V +
Sbjct: 130 AFANSPWVVQLF--CA---FQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFY--- 179
Query: 817 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH---HLDI 873
+V A++ +H ++H D+KP N+LLD + DFG + H D
Sbjct: 180 --TAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT 234
Query: 874 ASKTPS 879
A TP
Sbjct: 235 AVGTPD 240
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 61/133 (45%), Gaps = 18/133 (13%)
Query: 338 LDFVIFLSNCSSLKVLS-----------LSDNQFGGELPHSIANLS-LKMIELSVGRNQI 385
LD V+ SN LKVL L NQF +P ++N L +I+LS N+I
Sbjct: 11 LDTVVRCSN-KGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLS--NNRI 66
Query: 386 SGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSG-LGNL 444
S N+ L+T L N+ P LK+L+ LS+ N + +P G +L
Sbjct: 67 STLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDI-SVVPEGAFNDL 125
Query: 445 TKLGSLDLGSNSL 457
+ L L +G+N L
Sbjct: 126 SALSHLAIGANPL 138
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%)
Query: 117 IPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQ 176
+P+E+ N L + LSNN S + S + L+ S N+L P+ L L+
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 177 RLSVDINYLTGQLPDSVGNLSAIEVIRITENSL 209
LS+ N ++ + +LSA+ + I N L
Sbjct: 106 LLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 34/228 (14%)
Query: 673 ARKRRSTHKSVDTSPM---EKLFPMVSYA---ELSKATSEFSSSNMIGQGRFGTVYKGIL 726
+R R + K+ D + EKL P V Y E+ AT + +G+G FG V++
Sbjct: 60 SRSREPSPKTEDNEGVLLTEKLKP-VDYEYREEVHWATHQLR----LGRGSFGEVHRMED 114
Query: 727 GDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVF 786
AVK + L+ A + C L + R I+ + + EG + +
Sbjct: 115 KQTGFQCAVKKVRLEVFRAEELMA--CAGLTSPR------IVPLYGAVR-EG-PWVNIFM 164
Query: 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSN 846
E +E GSL + + E R L + + +EYLH ++HGD+K N
Sbjct: 165 ELLEGGSLGQLVKEQGCLPEDRALYYLGQ------ALEGLEYLHSR---RILHGDVKADN 215
Query: 847 VLLDYDMV-AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893
VLL D A + DFG A L D K+ + I GT ++AP
Sbjct: 216 VLLSSDGSHAALCDFGHAVCLQP---DGLGKSLLTGDYIPGTETHMAP 260
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNL 764
+ S +G G +G+V I VA+K ++ + + +K E L++++H N+
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 103
Query: 765 IKIITIC--SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822
I ++ + +S+ DF LV +M+ L+ + + +++ L +
Sbjct: 104 IGLLDVFTPASSLRNFYDF-YLVMPFMQT-DLQKIMGMEFSEEKIQYL--------VYQM 153
Query: 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
++Y+H +VH DLKP N+ ++ D + DFGLA+
Sbjct: 154 LKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 13/84 (15%)
Query: 812 LIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHL 871
++ +M +AI A+ YL + ++H D+KPSN+LLD + DFG++ L +
Sbjct: 125 ILGKMTVAI--VKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRL----V 176
Query: 872 DIASKTPSSSIGIKGTVGYVAPGK 895
D +K S+ G Y+AP +
Sbjct: 177 DDKAKDRSA-----GCAAYMAPER 195
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+++D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+++D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVK 193
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 194 GRTWXLCGTPEYLAP 208
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+++D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVK 193
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 194 GRTWXLCGTPEYLAP 208
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+++D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVK 193
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 194 GRTWXLCGTPEYLAP 208
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+++D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVK 193
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 194 GRTWXLCGTPEYLAP 208
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 819 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTP 878
A + EYLH +++ DLKP N+++D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVK 192
Query: 879 SSSIGIKGTVGYVAP 893
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 27/170 (15%)
Query: 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEAL-RNIRHR 762
T + IG G + + I AVK+I+ ++ ++ E E L R +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTE----EIEILLRYGQHP 76
Query: 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAI-- 820
N+I + + ++ + +V E + G L D + +R+ +R A+
Sbjct: 77 NIITLKDV-----YDDGKYVYVVTELXKGGELLDKI--------LRQKFFSEREASAVLF 123
Query: 821 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD----MVAHVGDFGLAKFL 866
+ +EYLH +VH DLKPSN+L + + DFG AK L
Sbjct: 124 TITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHG 840
+ A+V E + SLED + R SL + IAI + S +EY+H +++
Sbjct: 100 YNAMVLELL-GPSLEDLFDLCD-----RTFSLKTVLMIAIQLISRMEYVHSKN---LIYR 150
Query: 841 DLKPSNVLL-----DYDMVAHVGDFGLAK 864
D+KP N L+ V H+ DF LAK
Sbjct: 151 DVKPENFLIGRPGNKTQQVIHIIDFALAK 179
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHG 840
+ A+V E + SLED + R SL + IAI + S +EY+H +++
Sbjct: 79 YNAMVLELL-GPSLEDLFDLCD-----RTFSLKTVLMIAIQLISRMEYVHSKN---LIYR 129
Query: 841 DLKPSNVLL-----DYDMVAHVGDFGLAK 864
D+KP N L+ V H+ DF LAK
Sbjct: 130 DVKPENFLIGRPGNKTQQVIHIIDFALAK 158
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 348 SSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPG-IRNLVNLITFTLEV 406
+ L L L NQ LP + + K+ EL + NQ+ +IP G L NL T +L
Sbjct: 107 TQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLST 164
Query: 407 NQFHGTIPDVISELKNLQQLSVFNN 431
NQ L LQ +++F N
Sbjct: 165 NQLQSVPHGAFDRLGKLQTITLFGN 189
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 348 SSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGI-RNLVNLITFTLEV 406
+ L L L++NQ LP + + ++ +L +G NQ+ ++P G+ L L L
Sbjct: 83 TELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNT 140
Query: 407 NQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSG-LGNLTKLGSLDLGSN 455
NQ +L NLQ LS+ N L+ +P G L KL ++ L N
Sbjct: 141 NQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGN 189
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Query: 374 KMIELSVGRNQISGTIPPGI-RNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNF 432
K+ L++ NQ+ T+ G+ +L L T L NQ V L L +L + N
Sbjct: 60 KLTWLNLDYNQLQ-TLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQ 118
Query: 433 LRGGIPSGL-GNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKL 481
L+ +PSG+ LTKL L L +N LQ + NL S N+L
Sbjct: 119 LKS-LPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 378 LSVGRNQISGTIPPGI-RNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGG 436
L + NQ++ ++P G+ +L L L NQ V L L++L + N L+
Sbjct: 88 LGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS- 145
Query: 437 IPSG-LGNLTKLGSLDLGSNSLQGNIP----SSLGNCQNLILF 474
IP+G LT L +L L +N LQ ++P LG Q + LF
Sbjct: 146 IPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLF 187
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
Query: 707 FSSSNMIGQGRFGTVY--KGILGDD-----EMVVAVKVINLKQKGASKSFVSECEALRNI 759
F ++G+G +G V+ + + G + M V K + ++ + +E L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIA 819
+H ++ +I F+ L+ EY+ G L L + +E + +++A
Sbjct: 79 KHPFIVDLIYA-----FQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133
Query: 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864
L H Q +++ DLKP N++L++ + DFGL K
Sbjct: 134 ---------LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 348 SSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPG-IRNLVNLITFTLEV 406
+ L L L NQ LP + + K+ EL + NQ+ +IP G L NL T +L
Sbjct: 107 TQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLST 164
Query: 407 NQFHGTIPDVISELKNLQQLSVFNN 431
NQ L LQ +++F N
Sbjct: 165 NQLQSVPHGAFDRLGKLQTITLFGN 189
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 348 SSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGI-RNLVNLITFTLEV 406
+ L L L++NQ LP + + ++ +L +G NQ+ ++P G+ L L L
Sbjct: 83 TELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNT 140
Query: 407 NQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSG-LGNLTKLGSLDLGSN 455
NQ +L NLQ LS+ N L+ +P G L KL ++ L N
Sbjct: 141 NQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGN 189
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Query: 374 KMIELSVGRNQISGTIPPGI-RNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNF 432
K+ L++ NQ+ T+ G+ +L L T L NQ V L L +L + N
Sbjct: 60 KLTWLNLDYNQLQ-TLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQ 118
Query: 433 LRGGIPSGL-GNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKL 481
L+ +PSG+ LTKL L L +N LQ + NL S N+L
Sbjct: 119 LKS-LPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 378 LSVGRNQISGTIPPGI-RNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGG 436
L + NQ++ ++P G+ +L L L NQ V L L++L + N L+
Sbjct: 88 LGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS- 145
Query: 437 IPSG-LGNLTKLGSLDLGSNSLQGNIP----SSLGNCQNLILF 474
IP+G LT L +L L +N LQ ++P LG Q + LF
Sbjct: 146 IPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLF 187
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%), Gaps = 36/226 (15%)
Query: 713 IGQGRFGTVYKGI-LGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNLIKIIT 769
+G+G FG V + + + VA+K+I K + A++ ++ + ++ N +
Sbjct: 27 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVL 86
Query: 770 ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYL 829
+ +F G + FE + + E +L ++N Q L ++A + A+ +L
Sbjct: 87 MSDWFNFHG--HMCIAFELLGKNTFE-FLKENNFQ----PYPLPHVRHMAYQLCHALRFL 139
Query: 830 HHHCQPPMVHGDLKPSNVLL---DYDMVA----------------HVGDFGLAKFLSNHH 870
H + + H DLKP N+L +++ + V DFG A F HH
Sbjct: 140 H---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH 196
Query: 871 LDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVH 912
I + + +G+ P + +L+ + F+ H
Sbjct: 197 TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%), Gaps = 36/226 (15%)
Query: 713 IGQGRFGTVYKGI-LGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNLIKIIT 769
+G+G FG V + + + VA+K+I K + A++ ++ + ++ N +
Sbjct: 59 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVL 118
Query: 770 ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYL 829
+ +F G + FE + + E +L ++N Q L ++A + A+ +L
Sbjct: 119 MSDWFNFHG--HMCIAFELLGKNTFE-FLKENNFQ----PYPLPHVRHMAYQLCHALRFL 171
Query: 830 HHHCQPPMVHGDLKPSNVLL---DYDMVA----------------HVGDFGLAKFLSNHH 870
H + + H DLKP N+L +++ + V DFG A F HH
Sbjct: 172 H---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH 228
Query: 871 LDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVH 912
I + + +G+ P + +L+ + F+ H
Sbjct: 229 TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 274
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,878,072
Number of Sequences: 62578
Number of extensions: 915039
Number of successful extensions: 4386
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 462
Number of HSP's that attempted gapping in prelim test: 2244
Number of HSP's gapped (non-prelim): 1483
length of query: 914
length of database: 14,973,337
effective HSP length: 108
effective length of query: 806
effective length of database: 8,214,913
effective search space: 6621219878
effective search space used: 6621219878
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)