Query 042766
Match_columns 914
No_of_seqs 950 out of 6025
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 09:14:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042766.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042766hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2E-112 4E-117 1071.4 54.3 833 33-914 26-872 (968)
2 PLN00113 leucine-rich repeat r 100.0 3.6E-65 7.9E-70 642.5 29.0 515 101-627 69-585 (968)
3 KOG0472 Leucine-rich repeat pr 100.0 4.8E-47 1E-51 386.7 -6.6 473 103-603 47-541 (565)
4 KOG0472 Leucine-rich repeat pr 100.0 3.9E-47 8.4E-52 387.4 -11.1 474 77-579 45-541 (565)
5 KOG4194 Membrane glycoprotein 100.0 4E-43 8.7E-48 372.9 6.0 369 102-480 79-450 (873)
6 KOG4194 Membrane glycoprotein 100.0 8.4E-43 1.8E-47 370.5 5.9 378 223-611 80-460 (873)
7 KOG0595 Serine/threonine-prote 100.0 2E-41 4.3E-46 349.4 13.3 188 703-913 8-207 (429)
8 KOG0591 NIMA (never in mitosis 100.0 3.1E-41 6.6E-46 329.8 1.1 197 703-913 17-221 (375)
9 KOG0615 Serine/threonine prote 100.0 3.7E-39 8.1E-44 331.6 14.2 188 704-914 171-375 (475)
10 KOG0618 Serine/threonine phosp 100.0 2.9E-41 6.3E-46 377.9 -1.8 484 106-626 3-489 (1081)
11 KOG0598 Ribosomal protein S6 k 100.0 1.1E-38 2.3E-43 327.0 12.2 190 703-914 23-219 (357)
12 KOG0618 Serine/threonine phosp 100.0 3.8E-40 8.2E-45 369.0 -2.1 488 78-600 22-510 (1081)
13 KOG0581 Mitogen-activated prot 100.0 4.3E-38 9.3E-43 322.5 12.7 187 705-913 79-270 (364)
14 KOG0600 Cdc2-related protein k 100.0 5.5E-38 1.2E-42 331.0 13.6 192 704-914 116-314 (560)
15 KOG0593 Predicted protein kina 100.0 1.5E-38 3.3E-43 314.0 8.4 188 705-914 2-196 (396)
16 KOG0575 Polo-like serine/threo 100.0 1.7E-37 3.8E-42 336.1 15.6 187 705-913 18-211 (592)
17 KOG1187 Serine/threonine prote 100.0 2.7E-37 6E-42 337.7 17.3 205 692-913 62-271 (361)
18 KOG0592 3-phosphoinositide-dep 100.0 2E-37 4.2E-42 329.5 10.3 200 701-914 69-281 (604)
19 KOG0659 Cdk activating kinase 100.0 6.8E-37 1.5E-41 297.8 12.3 188 705-914 2-196 (318)
20 KOG0444 Cytoskeletal regulator 100.0 1.3E-38 2.8E-43 340.0 -1.1 367 99-530 5-374 (1255)
21 KOG0663 Protein kinase PITSLRE 100.0 9.2E-37 2E-41 305.5 10.9 191 703-913 74-271 (419)
22 KOG0198 MEKK and related serin 100.0 7.6E-36 1.7E-40 313.0 16.9 195 704-914 16-216 (313)
23 KOG0616 cAMP-dependent protein 100.0 1.4E-36 3E-41 299.9 10.4 185 704-913 43-234 (355)
24 KOG0605 NDR and related serine 100.0 7.7E-36 1.7E-40 318.0 13.4 198 702-913 138-381 (550)
25 KOG0444 Cytoskeletal regulator 100.0 1.2E-37 2.7E-42 332.5 -0.4 384 173-598 7-394 (1255)
26 KOG0597 Serine-threonine prote 100.0 2.3E-36 4.9E-41 320.7 9.0 187 705-914 2-194 (808)
27 KOG0578 p21-activated serine/t 100.0 9E-36 2E-40 320.2 11.6 188 704-914 272-463 (550)
28 KOG0661 MAPK related serine/th 100.0 2.8E-36 6.1E-41 315.8 5.6 190 703-914 8-204 (538)
29 KOG0192 Tyrosine kinase specif 100.0 6.5E-35 1.4E-39 316.2 15.3 188 706-913 42-239 (362)
30 KOG0594 Protein kinase PCTAIRE 100.0 1E-34 2.2E-39 298.1 13.7 197 704-914 10-215 (323)
31 KOG0582 Ste20-like serine/thre 100.0 1.7E-34 3.6E-39 300.2 14.1 194 704-913 25-225 (516)
32 KOG0658 Glycogen synthase kina 100.0 4.3E-35 9.3E-40 299.7 7.1 191 705-914 24-220 (364)
33 KOG0197 Tyrosine kinases [Sign 100.0 3.7E-34 8.1E-39 307.7 13.5 189 705-914 206-398 (468)
34 KOG0585 Ca2+/calmodulin-depend 100.0 5.2E-34 1.1E-38 298.1 12.9 197 702-913 94-312 (576)
35 KOG0660 Mitogen-activated prot 100.0 2.7E-34 5.8E-39 293.4 10.3 194 705-914 22-222 (359)
36 KOG0583 Serine/threonine prote 100.0 8.5E-34 1.8E-38 310.9 14.9 190 702-913 14-216 (370)
37 KOG0577 Serine/threonine prote 100.0 1.2E-34 2.7E-39 308.3 7.4 182 706-913 27-218 (948)
38 KOG0611 Predicted serine/threo 100.0 2E-34 4.4E-39 294.0 8.2 186 705-913 53-246 (668)
39 KOG0193 Serine/threonine prote 100.0 5.6E-34 1.2E-38 306.8 9.7 194 697-913 384-586 (678)
40 KOG0589 Serine/threonine prote 100.0 1.3E-33 2.9E-38 302.8 9.8 189 705-913 4-199 (426)
41 KOG0694 Serine/threonine prote 100.0 2.3E-33 5E-38 307.4 10.8 189 702-913 365-561 (694)
42 KOG0574 STE20-like serine/thre 100.0 2.6E-34 5.6E-39 282.7 2.7 185 706-913 34-222 (502)
43 KOG0201 Serine/threonine prote 100.0 6.9E-34 1.5E-38 295.8 4.2 187 705-913 13-204 (467)
44 KOG3653 Transforming growth fa 100.0 6.5E-33 1.4E-37 290.4 10.0 191 705-914 210-418 (534)
45 cd05599 STKc_NDR_like Catalyti 100.0 1.8E-32 4E-37 307.1 14.3 196 705-914 1-233 (364)
46 cd05628 STKc_NDR1 Catalytic do 100.0 1.9E-32 4.1E-37 306.4 14.1 196 705-914 1-230 (363)
47 KOG2345 Serine/threonine prote 100.0 3.8E-33 8.2E-38 269.0 6.7 207 704-913 20-234 (302)
48 cd05629 STKc_NDR_like_fungal C 100.0 4.3E-32 9.4E-37 305.2 16.0 196 705-914 1-242 (377)
49 cd05626 STKc_LATS2 Catalytic d 100.0 3.5E-32 7.5E-37 306.2 15.2 195 706-914 2-242 (381)
50 KOG0580 Serine/threonine prote 100.0 3.2E-33 7E-38 268.4 5.3 190 702-913 19-215 (281)
51 cd05571 STKc_PKB Catalytic dom 100.0 7.7E-32 1.7E-36 296.5 16.7 182 711-914 1-189 (323)
52 KOG4279 Serine/threonine prote 100.0 2.4E-32 5.1E-37 295.4 11.9 181 712-913 582-771 (1226)
53 cd05621 STKc_ROCK2 Catalytic d 100.0 4.5E-32 9.8E-37 303.0 14.2 191 702-914 40-241 (370)
54 cd05598 STKc_LATS Catalytic do 100.0 9.9E-32 2.1E-36 302.4 17.0 196 705-914 1-238 (376)
55 PTZ00263 protein kinase A cata 100.0 5.3E-32 1.2E-36 298.4 13.9 186 704-914 17-209 (329)
56 cd05625 STKc_LATS1 Catalytic d 100.0 5.8E-32 1.3E-36 304.8 14.1 195 706-914 2-242 (382)
57 cd05612 STKc_PRKX_like Catalyt 100.0 3.4E-32 7.4E-37 294.8 11.6 185 705-914 1-192 (291)
58 KOG0579 Ste20-like serine/thre 100.0 2.8E-33 6.2E-38 299.4 3.0 187 706-913 33-228 (1187)
59 PTZ00426 cAMP-dependent protei 100.0 1E-31 2.3E-36 296.6 14.8 186 704-914 29-222 (340)
60 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.2E-31 2.7E-36 296.4 15.3 185 705-914 1-192 (333)
61 KOG1989 ARK protein kinase fam 100.0 2.3E-32 5E-37 309.8 9.5 203 706-913 38-251 (738)
62 cd05627 STKc_NDR2 Catalytic do 100.0 2E-31 4.3E-36 297.9 16.6 196 705-914 1-230 (360)
63 cd05622 STKc_ROCK1 Catalytic d 100.0 1.1E-31 2.3E-36 300.3 14.4 195 698-914 36-241 (371)
64 KOG4250 TANK binding protein k 100.0 5.4E-32 1.2E-36 297.3 11.0 193 706-913 14-217 (732)
65 KOG0588 Serine/threonine prote 100.0 7.5E-32 1.6E-36 292.7 11.3 187 704-913 11-205 (786)
66 cd05631 STKc_GRK4 Catalytic do 100.0 2.1E-31 4.6E-36 287.7 14.9 187 707-914 2-195 (285)
67 cd05596 STKc_ROCK Catalytic do 100.0 1.2E-31 2.7E-36 299.9 13.5 190 703-914 41-241 (370)
68 cd05594 STKc_PKB_alpha Catalyt 100.0 5E-31 1.1E-35 290.4 18.1 182 711-914 1-190 (325)
69 KOG0194 Protein tyrosine kinas 100.0 1.7E-31 3.7E-36 292.4 13.6 187 707-914 159-356 (474)
70 cd05597 STKc_DMPK_like Catalyt 100.0 2.8E-31 6E-36 293.0 15.3 190 705-914 1-202 (331)
71 KOG4721 Serine/threonine prote 100.0 3E-32 6.6E-37 289.0 7.3 173 709-913 128-304 (904)
72 KOG2052 Activin A type IB rece 100.0 4.1E-31 8.9E-36 274.8 15.4 189 705-912 211-418 (513)
73 KOG0610 Putative serine/threon 100.0 1.6E-31 3.5E-36 276.0 12.3 199 704-914 76-329 (459)
74 KOG0667 Dual-specificity tyros 100.0 1.7E-31 3.8E-36 293.2 13.2 185 705-914 186-382 (586)
75 cd05593 STKc_PKB_gamma Catalyt 100.0 4.2E-31 9E-36 291.0 16.3 182 711-914 1-189 (328)
76 KOG1026 Nerve growth factor re 100.0 1.3E-31 2.9E-36 301.8 12.2 196 705-914 486-699 (774)
77 KOG0666 Cyclin C-dependent kin 100.0 3.1E-32 6.6E-37 270.0 6.1 197 703-913 22-233 (438)
78 cd05585 STKc_YPK1_like Catalyt 100.0 3.6E-31 7.8E-36 289.7 15.0 180 713-914 1-187 (312)
79 cd05595 STKc_PKB_beta Catalyti 100.0 2.9E-31 6.2E-36 291.8 14.2 182 711-914 1-189 (323)
80 cd05601 STKc_CRIK Catalytic do 100.0 5.2E-31 1.1E-35 291.1 16.2 190 705-914 1-203 (330)
81 cd05624 STKc_MRCK_beta Catalyt 100.0 4.4E-31 9.6E-36 291.4 15.4 190 705-914 1-202 (331)
82 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.1E-31 4.7E-36 295.3 12.9 198 704-914 6-270 (338)
83 KOG0986 G protein-coupled rece 100.0 4.6E-32 9.9E-37 281.6 5.7 191 703-914 183-380 (591)
84 KOG0033 Ca2+/calmodulin-depend 100.0 8.2E-33 1.8E-37 265.3 0.1 187 703-912 9-204 (355)
85 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5.2E-31 1.1E-35 285.2 13.6 188 705-914 5-198 (288)
86 cd05573 STKc_ROCK_NDR_like Cat 100.0 6.5E-31 1.4E-35 293.1 14.8 196 705-914 1-224 (350)
87 cd07859 STKc_TDY_MAPK_plant Ca 100.0 6.2E-31 1.3E-35 291.8 14.0 194 706-914 1-202 (338)
88 KOG0599 Phosphorylase kinase g 100.0 1.4E-31 3.1E-36 260.5 7.5 189 701-912 13-220 (411)
89 cd05614 STKc_MSK2_N N-terminal 100.0 1.5E-30 3.3E-35 287.7 16.5 188 706-914 1-201 (332)
90 cd05623 STKc_MRCK_alpha Cataly 100.0 1E-30 2.2E-35 288.8 14.7 190 705-914 1-202 (332)
91 KOG0607 MAP kinase-interacting 100.0 2.2E-31 4.7E-36 264.8 8.1 197 697-913 75-284 (463)
92 cd07869 STKc_PFTAIRE1 Catalyti 100.0 9.1E-31 2E-35 285.5 13.8 189 704-914 4-198 (303)
93 cd05591 STKc_nPKC_epsilon Cata 100.0 1.5E-30 3.2E-35 286.2 15.3 182 711-914 1-190 (321)
94 KOG0032 Ca2+/calmodulin-depend 100.0 1.1E-30 2.5E-35 285.7 14.3 186 704-913 34-231 (382)
95 cd05604 STKc_SGK3 Catalytic do 100.0 2.1E-30 4.6E-35 285.4 16.6 182 711-914 1-190 (325)
96 cd05592 STKc_nPKC_theta_delta 100.0 1.3E-30 2.9E-35 285.6 14.6 182 711-914 1-190 (316)
97 cd05616 STKc_cPKC_beta Catalyt 100.0 1.4E-30 3.1E-35 286.5 14.7 187 706-914 1-195 (323)
98 KOG0662 Cyclin-dependent kinas 100.0 3.4E-31 7.3E-36 242.3 8.0 186 706-913 3-195 (292)
99 cd05618 STKc_aPKC_iota Catalyt 100.0 1.7E-30 3.7E-35 286.3 15.3 182 711-914 1-190 (329)
100 cd05587 STKc_cPKC Catalytic do 100.0 1.3E-30 2.8E-35 287.0 14.2 187 706-914 1-195 (324)
101 cd05590 STKc_nPKC_eta Catalyti 100.0 1.4E-30 3E-35 285.9 14.4 182 711-914 1-190 (320)
102 cd05096 PTKc_DDR1 Catalytic do 100.0 1.5E-30 3.2E-35 284.1 14.2 196 705-914 5-234 (304)
103 cd05575 STKc_SGK Catalytic dom 100.0 2.7E-30 5.8E-35 284.3 16.3 182 711-914 1-190 (323)
104 cd05603 STKc_SGK2 Catalytic do 100.0 2.5E-30 5.5E-35 284.4 16.1 182 711-914 1-190 (321)
105 cd05588 STKc_aPKC Catalytic do 100.0 1.9E-30 4.1E-35 286.1 15.1 182 711-914 1-190 (329)
106 cd07862 STKc_CDK6 Catalytic do 100.0 3.2E-30 7E-35 279.5 16.0 193 705-914 1-203 (290)
107 cd05589 STKc_PKN Catalytic dom 100.0 1.5E-30 3.3E-35 286.4 13.5 185 707-914 1-195 (324)
108 cd05602 STKc_SGK1 Catalytic do 100.0 3E-30 6.5E-35 284.2 15.8 182 711-914 1-190 (325)
109 cd05584 STKc_p70S6K Catalytic 100.0 2.7E-30 5.9E-35 284.2 15.4 182 711-914 2-194 (323)
110 PTZ00267 NIMA-related protein 100.0 1.5E-30 3.3E-35 300.5 13.5 194 705-914 67-265 (478)
111 cd06649 PKc_MEK2 Catalytic dom 100.0 2.8E-30 6.1E-35 285.1 14.8 188 704-914 4-196 (331)
112 PHA03212 serine/threonine kina 100.0 1.5E-30 3.3E-35 292.3 12.8 182 705-914 92-277 (391)
113 KOG0584 Serine/threonine prote 100.0 4.7E-31 1E-35 286.6 8.4 186 708-913 43-236 (632)
114 KOG0612 Rho-associated, coiled 100.0 2.3E-31 4.9E-36 304.2 6.2 196 698-914 68-275 (1317)
115 cd05620 STKc_nPKC_delta Cataly 100.0 2.7E-30 5.9E-35 283.1 14.0 182 711-914 1-190 (316)
116 KOG4645 MAPKKK (MAP kinase kin 100.0 2.9E-31 6.3E-36 307.2 6.4 192 704-913 1234-1434(1509)
117 cd05619 STKc_nPKC_theta Cataly 100.0 3.2E-30 7E-35 282.4 14.3 182 711-914 1-190 (316)
118 cd05582 STKc_RSK_N N-terminal 100.0 5.5E-30 1.2E-34 281.3 16.1 182 711-914 2-192 (318)
119 cd07848 STKc_CDKL5 Catalytic d 100.0 2.5E-30 5.5E-35 279.9 13.1 188 706-914 2-195 (287)
120 KOG4717 Serine/threonine prote 100.0 1.1E-30 2.4E-35 274.1 9.8 187 705-913 18-212 (864)
121 cd05615 STKc_cPKC_alpha Cataly 100.0 3E-30 6.5E-35 283.7 13.8 187 706-914 1-195 (323)
122 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.1E-30 1.1E-34 282.4 14.7 182 711-914 1-190 (327)
123 cd05605 STKc_GRK4_like Catalyt 100.0 7.1E-30 1.5E-34 275.8 15.1 188 706-914 1-195 (285)
124 PRK13184 pknD serine/threonine 100.0 5.3E-30 1.1E-34 302.4 15.0 202 705-914 2-225 (932)
125 cd05608 STKc_GRK1 Catalytic do 100.0 5.7E-30 1.2E-34 275.8 14.0 184 713-914 1-191 (280)
126 KOG0690 Serine/threonine prote 100.0 6.1E-31 1.3E-35 261.8 5.5 190 703-914 166-362 (516)
127 cd05586 STKc_Sck1_like Catalyt 100.0 1.1E-29 2.4E-34 280.5 16.1 180 713-914 1-191 (330)
128 PLN00034 mitogen-activated pro 100.0 3.8E-30 8.3E-35 286.7 12.1 184 705-914 74-267 (353)
129 cd06650 PKc_MEK1 Catalytic dom 100.0 8.9E-30 1.9E-34 281.1 14.7 188 704-914 4-196 (333)
130 PTZ00283 serine/threonine prot 100.0 4E-30 8.7E-35 296.9 12.3 201 703-914 30-239 (496)
131 KOG0196 Tyrosine kinase, EPH ( 100.0 1.5E-30 3.2E-35 286.6 8.2 202 693-912 608-826 (996)
132 PTZ00036 glycogen synthase kin 100.0 5.6E-30 1.2E-34 292.3 13.3 192 704-914 65-265 (440)
133 KOG1094 Discoidin domain recep 100.0 2.4E-30 5.1E-35 276.1 9.2 191 705-914 538-733 (807)
134 KOG4236 Serine/threonine prote 100.0 1.1E-29 2.3E-34 267.3 13.8 181 710-912 569-758 (888)
135 cd05064 PTKc_EphR_A10 Catalyti 100.0 8.6E-30 1.9E-34 272.3 13.4 190 704-913 4-201 (266)
136 cd05104 PTKc_Kit Catalytic dom 100.0 9.8E-30 2.1E-34 285.1 14.0 197 704-914 34-310 (375)
137 cd07863 STKc_CDK4 Catalytic do 100.0 1.7E-29 3.6E-34 273.6 15.2 192 706-914 1-201 (288)
138 cd05570 STKc_PKC Catalytic dom 100.0 1.1E-29 2.4E-34 278.7 14.0 182 711-914 1-190 (318)
139 cd05106 PTKc_CSF-1R Catalytic 100.0 7E-30 1.5E-34 286.0 12.5 198 703-914 36-308 (374)
140 KOG0586 Serine/threonine prote 100.0 1.3E-29 2.8E-34 275.3 13.7 188 703-913 54-248 (596)
141 cd05607 STKc_GRK7 Catalytic do 100.0 2.1E-29 4.6E-34 270.9 15.3 181 713-914 1-188 (277)
142 cd05108 PTKc_EGFR Catalytic do 100.0 1.7E-29 3.7E-34 277.2 14.2 189 705-913 7-204 (316)
143 KOG1095 Protein tyrosine kinas 100.0 6.8E-30 1.5E-34 298.7 11.3 196 705-914 692-898 (1025)
144 cd07853 STKc_NLK Catalytic dom 100.0 1.7E-29 3.7E-34 283.7 14.0 192 706-914 1-199 (372)
145 PHA02988 hypothetical protein; 100.0 3E-29 6.4E-34 270.3 14.9 183 710-914 25-216 (283)
146 cd06645 STKc_MAP4K3 Catalytic 100.0 2.5E-29 5.4E-34 269.0 13.7 188 705-914 9-203 (267)
147 cd06646 STKc_MAP4K5 Catalytic 100.0 4.1E-29 8.8E-34 267.4 15.3 188 705-914 9-203 (267)
148 cd07868 STKc_CDK8 Catalytic do 100.0 4.4E-29 9.6E-34 274.2 15.7 191 710-914 6-210 (317)
149 cd07876 STKc_JNK2 Catalytic do 100.0 3.3E-29 7.2E-34 279.9 14.4 191 703-914 19-216 (359)
150 PHA03211 serine/threonine kina 100.0 3E-29 6.5E-34 284.8 13.9 184 704-913 168-355 (461)
151 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3E-29 6.6E-34 274.4 13.5 188 705-914 6-199 (309)
152 PTZ00266 NIMA-related protein 100.0 2.6E-29 5.6E-34 297.5 13.6 199 702-914 10-237 (1021)
153 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 5.5E-29 1.2E-33 268.9 15.1 194 705-914 4-205 (284)
154 cd05630 STKc_GRK6 Catalytic do 100.0 5.9E-29 1.3E-33 268.6 14.9 187 707-914 2-195 (285)
155 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.7E-29 8E-34 281.1 13.5 198 703-914 35-333 (400)
156 PHA03209 serine/threonine kina 100.0 3.5E-29 7.6E-34 279.0 13.1 184 702-914 63-250 (357)
157 cd07878 STKc_p38beta_MAPK11 Ca 100.0 4.3E-29 9.2E-34 277.4 13.5 191 702-914 12-210 (343)
158 cd05054 PTKc_VEGFR Catalytic d 100.0 3.9E-29 8.4E-34 276.2 13.0 198 704-914 6-269 (337)
159 cd07874 STKc_JNK3 Catalytic do 100.0 3.9E-29 8.5E-34 279.0 13.1 192 702-914 14-212 (355)
160 KOG0587 Traf2- and Nck-interac 100.0 7.6E-29 1.7E-33 277.5 15.2 201 697-913 11-221 (953)
161 cd07875 STKc_JNK1 Catalytic do 100.0 5.3E-29 1.2E-33 278.9 14.1 191 703-914 22-219 (364)
162 PTZ00284 protein kinase; Provi 100.0 4E-29 8.6E-34 288.7 13.3 191 698-914 122-339 (467)
163 cd05049 PTKc_Trk Catalytic dom 100.0 6.2E-29 1.3E-33 268.0 13.6 197 704-914 4-218 (280)
164 cd05052 PTKc_Abl Catalytic dom 100.0 9.5E-29 2.1E-33 263.9 14.8 190 705-914 6-199 (263)
165 cd05035 PTKc_Axl_like Catalyti 100.0 1.1E-28 2.5E-33 264.8 15.4 199 707-914 1-209 (273)
166 cd05048 PTKc_Ror Catalytic Dom 100.0 8.4E-29 1.8E-33 267.4 14.2 196 705-914 5-220 (283)
167 cd05632 STKc_GRK5 Catalytic do 100.0 1.1E-28 2.4E-33 266.5 14.9 187 707-914 2-195 (285)
168 cd06643 STKc_SLK Catalytic dom 100.0 1.9E-28 4.2E-33 264.4 16.6 188 706-914 6-202 (282)
169 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.1E-28 4.5E-33 264.4 16.7 194 705-914 4-206 (284)
170 cd06638 STKc_myosinIIIA Cataly 100.0 8.5E-29 1.8E-33 267.8 13.7 205 696-914 9-223 (286)
171 cd05075 PTKc_Axl Catalytic dom 100.0 9.9E-29 2.1E-33 265.1 14.1 199 707-914 1-208 (272)
172 cd06637 STKc_TNIK Catalytic do 100.0 9.4E-29 2E-33 265.3 13.9 196 703-914 4-210 (272)
173 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.1E-28 2.5E-33 262.1 14.4 188 705-914 4-195 (256)
174 cd05111 PTK_HER3 Pseudokinase 100.0 1.3E-28 2.9E-33 265.1 14.7 190 705-914 7-205 (279)
175 KOG0984 Mitogen-activated prot 100.0 2.2E-29 4.7E-34 236.2 7.3 190 705-913 46-245 (282)
176 cd05093 PTKc_TrkB Catalytic do 100.0 1.5E-28 3.2E-33 266.1 15.1 196 705-914 5-216 (288)
177 cd05062 PTKc_IGF-1R Catalytic 100.0 8.2E-29 1.8E-33 266.5 12.9 198 703-914 4-215 (277)
178 cd06611 STKc_SLK_like Catalyti 100.0 8.6E-29 1.9E-33 266.8 13.0 189 705-914 5-202 (280)
179 cd06652 STKc_MEKK2 Catalytic d 100.0 1.7E-28 3.6E-33 262.3 14.6 193 705-914 2-203 (265)
180 cd08219 STKc_Nek3 Catalytic do 100.0 3.5E-28 7.6E-33 258.2 16.7 189 706-914 1-194 (255)
181 cd05109 PTKc_HER2 Catalytic do 100.0 1.5E-28 3.3E-33 264.7 13.9 190 704-913 6-204 (279)
182 KOG0669 Cyclin T-dependent kin 100.0 1.3E-30 2.7E-35 251.2 -2.1 197 705-914 17-223 (376)
183 cd06644 STKc_STK10_LOK Catalyt 100.0 1.9E-28 4E-33 265.9 14.5 189 705-914 12-209 (292)
184 cd05090 PTKc_Ror1 Catalytic do 100.0 1.4E-28 3E-33 265.6 13.4 196 705-914 5-220 (283)
185 KOG0983 Mitogen-activated prot 100.0 4.9E-29 1.1E-33 243.2 8.7 187 705-913 92-287 (391)
186 cd05084 PTKc_Fes Catalytic dom 100.0 1.7E-28 3.7E-33 260.1 13.7 185 711-914 1-190 (252)
187 cd05072 PTKc_Lyn Catalytic dom 100.0 2.4E-28 5.1E-33 260.5 14.9 190 704-914 5-198 (261)
188 cd05042 PTKc_Aatyk Catalytic d 100.0 1.7E-28 3.7E-33 262.8 13.7 189 711-914 1-203 (269)
189 cd07867 STKc_CDC2L6 Catalytic 100.0 2.1E-28 4.7E-33 268.8 14.7 191 710-914 6-210 (317)
190 cd06654 STKc_PAK1 Catalytic do 100.0 2.1E-28 4.5E-33 265.8 14.4 187 705-914 20-210 (296)
191 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.3E-28 5.1E-33 259.6 14.5 188 705-914 4-195 (256)
192 KOG0604 MAP kinase-activated p 100.0 3.8E-29 8.3E-34 247.1 7.3 189 703-913 59-256 (400)
193 cd08529 STKc_FA2-like Catalyti 100.0 2.9E-28 6.3E-33 258.9 14.6 189 706-914 1-195 (256)
194 cd06615 PKc_MEK Catalytic doma 100.0 2.4E-28 5.2E-33 267.0 14.3 186 706-914 2-192 (308)
195 cd06639 STKc_myosinIIIB Cataly 100.0 2.1E-28 4.7E-33 265.3 13.8 206 695-914 12-227 (291)
196 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.3E-28 4.9E-33 266.4 14.0 188 705-914 6-199 (301)
197 cd05088 PTKc_Tie2 Catalytic do 100.0 2.9E-28 6.4E-33 265.6 14.7 194 704-914 6-217 (303)
198 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.2E-28 7E-33 260.7 14.8 189 711-914 1-203 (269)
199 cd06625 STKc_MEKK3_like Cataly 100.0 3.5E-28 7.5E-33 259.5 14.8 191 705-914 2-201 (263)
200 cd05033 PTKc_EphR Catalytic do 100.0 3.2E-28 6.9E-33 260.3 14.5 191 704-913 3-201 (266)
201 cd05097 PTKc_DDR_like Catalyti 100.0 2.2E-28 4.7E-33 265.7 13.4 196 705-914 5-225 (295)
202 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.3E-28 5E-33 271.1 13.8 198 704-914 6-275 (343)
203 cd05053 PTKc_FGFR Catalytic do 100.0 3.2E-28 6.9E-33 264.3 14.6 198 703-914 10-228 (293)
204 KOG1035 eIF-2alpha kinase GCN2 100.0 5.1E-29 1.1E-33 287.4 8.7 206 701-914 475-812 (1351)
205 cd06619 PKc_MKK5 Catalytic dom 100.0 3.1E-28 6.8E-33 262.2 14.4 181 706-914 2-187 (279)
206 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.6E-28 5.7E-33 260.1 13.6 178 711-913 1-202 (262)
207 cd05094 PTKc_TrkC Catalytic do 100.0 3.2E-28 6.9E-33 263.9 14.4 196 705-914 5-219 (291)
208 cd06656 STKc_PAK3 Catalytic do 100.0 2.9E-28 6.3E-33 264.8 14.0 188 704-914 18-209 (297)
209 PHA03207 serine/threonine kina 100.0 1.6E-28 3.5E-33 277.2 12.4 185 704-914 91-281 (392)
210 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.3E-28 7E-33 273.2 14.7 199 702-914 34-335 (401)
211 cd05115 PTKc_Zap-70 Catalytic 100.0 5E-28 1.1E-32 257.2 15.4 184 712-914 2-192 (257)
212 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.7E-28 3.6E-33 261.6 11.8 191 703-914 4-198 (261)
213 cd05091 PTKc_Ror2 Catalytic do 100.0 2.5E-28 5.5E-33 263.6 13.1 196 705-914 5-220 (283)
214 cd08228 STKc_Nek6 Catalytic do 100.0 2.8E-28 6.2E-33 260.8 13.3 192 705-914 2-200 (267)
215 KOG0596 Dual specificity; seri 100.0 1.2E-28 2.5E-33 262.5 10.1 188 704-913 360-565 (677)
216 cd08227 PK_STRAD_alpha Pseudok 100.0 3.6E-28 7.9E-33 268.0 14.4 193 709-914 2-204 (327)
217 cd05059 PTKc_Tec_like Catalyti 100.0 4.1E-28 8.9E-33 257.8 14.3 188 705-914 4-195 (256)
218 cd05032 PTKc_InsR_like Catalyt 100.0 4.8E-28 1E-32 260.6 15.0 197 704-914 5-215 (277)
219 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.1E-28 6.6E-33 262.0 13.4 197 704-914 5-215 (277)
220 PF00069 Pkinase: Protein kina 100.0 2.3E-28 5E-33 260.3 12.1 186 707-914 1-193 (260)
221 PF07714 Pkinase_Tyr: Protein 100.0 2.7E-28 5.9E-33 259.5 12.4 188 709-914 3-199 (259)
222 cd05071 PTKc_Src Catalytic dom 100.0 5E-28 1.1E-32 258.1 14.5 188 705-914 6-197 (262)
223 cd05095 PTKc_DDR2 Catalytic do 100.0 4.1E-28 8.9E-33 263.7 14.1 196 705-914 5-226 (296)
224 cd05051 PTKc_DDR Catalytic dom 100.0 5.4E-28 1.2E-32 262.9 14.9 197 704-914 4-226 (296)
225 cd05065 PTKc_EphR_B Catalytic 100.0 5.6E-28 1.2E-32 258.8 14.6 193 705-913 4-204 (269)
226 cd05061 PTKc_InsR Catalytic do 100.0 3.2E-28 7E-33 263.4 12.9 198 703-914 4-215 (288)
227 cd05066 PTKc_EphR_A Catalytic 100.0 4.4E-28 9.6E-33 259.3 13.7 191 705-913 4-202 (267)
228 KOG1151 Tousled-like protein k 100.0 1.2E-28 2.6E-33 254.4 8.5 197 704-912 462-676 (775)
229 cd05580 STKc_PKA Catalytic dom 100.0 5.4E-28 1.2E-32 262.0 14.1 185 705-914 1-192 (290)
230 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3E-28 6.6E-33 261.4 12.0 177 712-913 2-214 (274)
231 cd06651 STKc_MEKK3 Catalytic d 100.0 9.3E-28 2E-32 256.7 15.7 193 705-914 2-203 (266)
232 cd07861 STKc_CDK1_euk Catalyti 100.0 5E-28 1.1E-32 261.6 13.7 189 706-914 1-196 (285)
233 cd06613 STKc_MAP4K3_like Catal 99.9 7.6E-28 1.7E-32 256.7 14.6 189 705-914 3-198 (262)
234 cd06624 STKc_ASK Catalytic dom 99.9 6E-28 1.3E-32 258.4 13.8 191 703-914 6-205 (268)
235 cd05089 PTKc_Tie1 Catalytic do 99.9 5.8E-28 1.3E-32 262.6 13.7 193 705-914 2-212 (297)
236 cd06655 STKc_PAK2 Catalytic do 99.9 6.7E-28 1.5E-32 261.8 14.2 187 705-914 19-209 (296)
237 cd05574 STKc_phototropin_like 99.9 8.2E-28 1.8E-32 264.1 15.0 197 706-914 2-226 (316)
238 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 8.3E-28 1.8E-32 259.6 14.8 190 707-914 6-204 (283)
239 cd08223 STKc_Nek4 Catalytic do 99.9 1.1E-27 2.3E-32 254.8 15.2 190 706-914 1-196 (257)
240 cd05101 PTKc_FGFR2 Catalytic d 99.9 6.8E-28 1.5E-32 263.1 14.0 198 703-914 13-233 (304)
241 cd05055 PTKc_PDGFR Catalytic d 99.9 7.5E-28 1.6E-32 262.2 14.2 193 704-914 34-237 (302)
242 cd05082 PTKc_Csk Catalytic dom 99.9 9.1E-28 2E-32 255.2 14.5 184 705-914 6-193 (256)
243 cd05068 PTKc_Frk_like Catalyti 99.9 7.7E-28 1.7E-32 256.5 13.9 190 704-914 5-198 (261)
244 cd08221 STKc_Nek9 Catalytic do 99.9 8.8E-28 1.9E-32 255.3 14.3 189 706-914 1-195 (256)
245 cd05092 PTKc_TrkA Catalytic do 99.9 7.5E-28 1.6E-32 259.4 13.8 196 705-914 5-218 (280)
246 cd05058 PTKc_Met_Ron Catalytic 99.9 8.3E-28 1.8E-32 256.4 13.9 188 711-914 1-196 (262)
247 cd06628 STKc_MAPKKK_Byr2_like 99.9 9.7E-28 2.1E-32 256.7 14.5 193 706-914 1-206 (267)
248 cd07839 STKc_CDK5 Catalytic do 99.9 4.2E-28 9.2E-33 262.0 11.6 187 706-914 1-194 (284)
249 cd07849 STKc_ERK1_2_like Catal 99.9 5.7E-28 1.2E-32 267.5 12.7 195 704-914 4-204 (336)
250 KOG0696 Serine/threonine prote 99.9 3.9E-29 8.5E-34 256.1 3.0 188 704-913 348-543 (683)
251 cd07844 STKc_PCTAIRE_like Cata 99.9 9.9E-28 2.1E-32 260.1 14.2 188 705-914 5-198 (291)
252 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 2.5E-28 5.4E-33 259.8 9.3 179 711-914 1-199 (258)
253 cd06653 STKc_MEKK3_like_1 Cata 99.9 1.3E-27 2.9E-32 255.2 14.9 193 705-914 2-203 (264)
254 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 6.8E-28 1.5E-32 260.7 12.9 190 705-914 1-201 (286)
255 cd05063 PTKc_EphR_A2 Catalytic 99.9 8.8E-28 1.9E-32 257.2 13.5 192 704-913 4-203 (268)
256 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 1.3E-27 2.8E-32 254.6 14.7 189 704-914 5-197 (260)
257 cd05098 PTKc_FGFR1 Catalytic d 99.9 8.4E-28 1.8E-32 262.7 13.5 197 704-914 17-236 (307)
258 cd06636 STKc_MAP4K4_6 Catalyti 99.9 1.2E-27 2.6E-32 258.2 14.5 203 696-914 7-220 (282)
259 cd05086 PTKc_Aatyk2 Catalytic 99.9 1.2E-27 2.6E-32 256.0 14.3 188 711-914 1-202 (268)
260 cd05116 PTKc_Syk Catalytic dom 99.9 1.4E-27 3.1E-32 253.9 14.5 183 712-914 2-192 (257)
261 cd05110 PTKc_HER4 Catalytic do 99.9 9.8E-28 2.1E-32 261.6 13.3 191 704-914 6-205 (303)
262 cd07832 STKc_CCRK Catalytic do 99.9 1.1E-27 2.4E-32 259.1 13.6 188 706-914 1-195 (286)
263 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 9.9E-28 2.1E-32 255.3 13.0 176 711-913 1-199 (259)
264 cd07841 STKc_CDK7 Catalytic do 99.9 1.1E-27 2.4E-32 260.6 13.7 187 706-914 1-197 (298)
265 cd06658 STKc_PAK5 Catalytic do 99.9 5.2E-28 1.1E-32 262.1 11.0 186 706-914 23-212 (292)
266 cd07847 STKc_CDKL1_4 Catalytic 99.9 1.6E-27 3.6E-32 257.7 14.9 188 705-914 1-195 (286)
267 cd07870 STKc_PFTAIRE2 Catalyti 99.9 1.2E-27 2.6E-32 259.4 13.9 189 704-914 4-198 (291)
268 cd05057 PTKc_EGFR_like Catalyt 99.9 2E-27 4.4E-32 256.0 15.3 190 705-914 7-205 (279)
269 cd06659 STKc_PAK6 Catalytic do 99.9 6.6E-28 1.4E-32 262.0 11.6 186 706-914 22-211 (297)
270 cd08229 STKc_Nek7 Catalytic do 99.9 9.2E-28 2E-32 256.8 12.5 192 705-914 2-200 (267)
271 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 1.7E-27 3.7E-32 254.7 14.5 192 705-914 2-200 (267)
272 cd00192 PTKc Catalytic domain 99.9 2.1E-27 4.6E-32 253.0 14.9 190 711-914 1-201 (262)
273 cd05099 PTKc_FGFR4 Catalytic d 99.9 1.8E-27 3.8E-32 261.0 14.7 197 704-914 11-230 (314)
274 cd06630 STKc_MEKK1 Catalytic d 99.9 1.3E-27 2.8E-32 255.9 13.2 191 706-914 1-202 (268)
275 KOG1006 Mitogen-activated prot 99.9 4.2E-29 9E-34 242.9 1.4 187 709-913 68-262 (361)
276 cd05045 PTKc_RET Catalytic dom 99.9 1.5E-27 3.3E-32 258.4 13.8 195 706-914 1-223 (290)
277 cd06608 STKc_myosinIII_like Ca 99.9 1.8E-27 4E-32 255.6 14.0 198 703-914 4-212 (275)
278 cd05046 PTK_CCK4 Pseudokinase 99.9 1.4E-27 3.1E-32 256.6 13.2 195 705-914 5-212 (275)
279 cd05040 PTKc_Ack_like Catalyti 99.9 1.9E-27 4.2E-32 252.8 14.0 186 711-914 1-194 (257)
280 cd05609 STKc_MAST Catalytic do 99.9 1.9E-27 4.1E-32 259.7 14.2 195 706-914 2-210 (305)
281 KOG1152 Signal transduction se 99.9 6.3E-28 1.4E-32 257.6 9.9 187 702-912 558-761 (772)
282 cd05060 PTKc_Syk_like Catalyti 99.9 2.6E-27 5.7E-32 251.8 14.8 184 711-914 1-192 (257)
283 cd05043 PTK_Ryk Pseudokinase d 99.9 1.9E-27 4E-32 256.4 13.8 199 703-914 4-213 (280)
284 cd05050 PTKc_Musk Catalytic do 99.9 1.6E-27 3.4E-32 258.1 13.1 197 704-914 4-226 (288)
285 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 5E-27 1.1E-31 253.6 17.0 194 705-914 4-206 (284)
286 KOG0671 LAMMER dual specificit 99.9 7.8E-28 1.7E-32 246.6 9.9 186 704-914 88-303 (415)
287 cd05100 PTKc_FGFR3 Catalytic d 99.9 2.4E-27 5.2E-32 262.2 14.5 196 705-914 12-230 (334)
288 cd07846 STKc_CDKL2_3 Catalytic 99.9 1E-27 2.3E-32 259.2 11.4 187 706-914 2-195 (286)
289 cd07843 STKc_CDC2L1 Catalytic 99.9 2.4E-27 5.3E-32 257.3 14.2 190 705-914 5-201 (293)
290 cd05069 PTKc_Yes Catalytic dom 99.9 3.4E-27 7.3E-32 251.4 14.8 188 705-914 6-197 (260)
291 cd05633 STKc_GRK3 Catalytic do 99.9 2.6E-27 5.6E-32 254.9 14.0 179 712-914 1-190 (279)
292 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 2E-27 4.3E-32 256.8 13.0 188 704-914 4-196 (284)
293 cd06609 STKc_MST3_like Catalyt 99.9 2.6E-27 5.6E-32 254.4 13.9 187 705-914 1-192 (274)
294 cd06612 STKc_MST1_2 Catalytic 99.9 2.8E-27 6.1E-32 251.3 14.0 187 705-914 3-193 (256)
295 cd06642 STKc_STK25-YSK1 Cataly 99.9 1.3E-27 2.9E-32 257.1 11.7 187 705-914 4-195 (277)
296 cd05067 PTKc_Lck_Blk Catalytic 99.9 3.6E-27 7.7E-32 251.3 14.8 189 704-914 5-197 (260)
297 KOG0608 Warts/lats-like serine 99.9 7.5E-28 1.6E-32 258.6 9.4 196 704-913 628-864 (1034)
298 cd05056 PTKc_FAK Catalytic dom 99.9 2.5E-27 5.3E-32 254.0 13.6 189 705-914 6-202 (270)
299 cd05074 PTKc_Tyro3 Catalytic d 99.9 4.5E-27 9.8E-32 252.4 15.4 199 707-914 1-209 (273)
300 cd05047 PTKc_Tie Catalytic dom 99.9 3.4E-27 7.4E-32 252.9 14.2 187 711-914 1-205 (270)
301 cd05085 PTKc_Fer Catalytic dom 99.9 4.7E-27 1E-31 248.7 15.1 183 711-914 1-188 (250)
302 cd05578 STKc_Yank1 Catalytic d 99.9 2.2E-27 4.7E-32 252.6 12.4 186 706-914 1-193 (258)
303 cd06617 PKc_MKK3_6 Catalytic d 99.9 3.8E-27 8.2E-32 254.4 14.4 191 705-914 1-201 (283)
304 cd08218 STKc_Nek1 Catalytic do 99.9 4E-27 8.6E-32 250.2 14.2 189 706-914 1-195 (256)
305 cd05034 PTKc_Src_like Catalyti 99.9 4.1E-27 8.9E-32 250.9 14.0 190 704-914 5-198 (261)
306 cd07865 STKc_CDK9 Catalytic do 99.9 5.9E-27 1.3E-31 256.5 15.6 198 704-914 11-218 (310)
307 PHA03210 serine/threonine kina 99.9 8E-28 1.7E-32 278.7 9.0 195 703-914 146-362 (501)
308 cd07845 STKc_CDK10 Catalytic d 99.9 4.5E-27 9.7E-32 257.3 14.4 191 704-914 6-203 (309)
309 cd05039 PTKc_Csk_like Catalyti 99.9 4.2E-27 9E-32 250.1 13.6 185 704-914 5-193 (256)
310 cd06640 STKc_MST4 Catalytic do 99.9 5.8E-27 1.3E-31 252.1 14.6 187 705-914 4-195 (277)
311 cd06631 STKc_YSK4 Catalytic do 99.9 5.7E-27 1.2E-31 250.4 14.2 192 706-914 1-202 (265)
312 cd06647 STKc_PAK_I Catalytic d 99.9 4E-27 8.7E-32 255.4 13.2 188 704-914 18-209 (293)
313 cd06632 STKc_MEKK1_plant Catal 99.9 5.3E-27 1.2E-31 249.5 13.9 186 706-914 1-196 (258)
314 cd07837 STKc_CdkB_plant Cataly 99.9 7.6E-27 1.6E-31 253.7 15.3 197 705-914 1-206 (295)
315 cd07850 STKc_JNK Catalytic dom 99.9 5.3E-27 1.1E-31 261.6 14.4 191 703-914 14-211 (353)
316 cd06629 STKc_MAPKKK_Bck1_like 99.9 7E-27 1.5E-31 250.8 14.5 189 706-914 2-206 (272)
317 smart00219 TyrKc Tyrosine kina 99.9 6.5E-27 1.4E-31 248.8 14.1 189 707-914 1-198 (258)
318 cd08220 STKc_Nek8 Catalytic do 99.9 6.3E-27 1.4E-31 248.6 13.8 188 706-914 1-195 (256)
319 cd05073 PTKc_Hck Catalytic dom 99.9 8.4E-27 1.8E-31 248.4 14.8 189 704-914 5-197 (260)
320 cd05606 STKc_beta_ARK Catalyti 99.9 7.2E-27 1.6E-31 251.4 14.4 179 712-914 1-190 (278)
321 cd06917 STKc_NAK1_like Catalyt 99.9 5.9E-27 1.3E-31 252.1 13.7 186 706-914 2-196 (277)
322 cd06626 STKc_MEKK4 Catalytic d 99.9 8.6E-27 1.9E-31 248.8 14.8 191 706-914 1-200 (264)
323 cd07855 STKc_ERK5 Catalytic do 99.9 4.5E-27 9.8E-32 260.1 13.0 195 705-914 5-206 (334)
324 KOG0199 ACK and related non-re 99.9 1.8E-27 3.9E-32 258.7 9.5 190 707-914 112-309 (1039)
325 cd07842 STKc_CDK8_like Catalyt 99.9 6.2E-27 1.3E-31 257.1 13.8 196 706-914 1-210 (316)
326 KOG1025 Epidermal growth facto 99.9 1.1E-27 2.4E-32 264.7 7.7 188 706-913 697-893 (1177)
327 PHA02882 putative serine/threo 99.9 7.1E-27 1.5E-31 253.5 14.0 197 705-913 12-226 (294)
328 cd05041 PTKc_Fes_like Catalyti 99.9 7.2E-27 1.6E-31 247.5 13.6 184 711-914 1-189 (251)
329 KOG0664 Nemo-like MAPK-related 99.9 6.1E-29 1.3E-33 241.9 -2.1 188 709-913 57-251 (449)
330 cd05112 PTKc_Itk Catalytic dom 99.9 9.5E-27 2.1E-31 247.3 14.4 188 705-914 4-195 (256)
331 cd07860 STKc_CDK2_3 Catalytic 99.9 4.7E-27 1E-31 253.9 12.1 188 706-914 1-195 (284)
332 cd08217 STKc_Nek2 Catalytic do 99.9 7.5E-27 1.6E-31 249.3 13.2 193 706-914 1-204 (265)
333 cd05044 PTKc_c-ros Catalytic d 99.9 4.6E-27 9.9E-32 251.8 11.6 190 711-914 1-207 (269)
334 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 1E-26 2.3E-31 251.5 14.3 191 706-914 2-197 (287)
335 cd07836 STKc_Pho85 Catalytic d 99.9 9.3E-27 2E-31 251.5 13.6 189 706-914 1-195 (284)
336 cd06623 PKc_MAPKK_plant_like C 99.9 1.1E-26 2.3E-31 248.0 13.9 187 706-914 2-194 (264)
337 cd06648 STKc_PAK_II Catalytic 99.9 1.3E-26 2.8E-31 250.4 14.5 186 706-914 20-209 (285)
338 cd06605 PKc_MAPKK Catalytic do 99.9 5E-27 1.1E-31 250.8 11.1 186 706-914 2-193 (265)
339 cd07858 STKc_TEY_MAPK_plant Ca 99.9 7.2E-27 1.6E-31 258.7 12.7 193 704-914 4-203 (337)
340 cd05577 STKc_GRK Catalytic dom 99.9 1.2E-26 2.6E-31 249.6 14.1 181 713-914 1-188 (277)
341 PHA03390 pk1 serine/threonine- 99.9 1.7E-26 3.6E-31 246.9 14.9 187 697-914 6-200 (267)
342 cd05613 STKc_MSK1_N N-terminal 99.9 1.2E-26 2.6E-31 251.5 13.9 188 706-914 1-202 (290)
343 cd05083 PTKc_Chk Catalytic dom 99.9 1.2E-26 2.6E-31 246.2 13.7 182 705-914 6-191 (254)
344 cd07833 STKc_CDKL Catalytic do 99.9 7E-27 1.5E-31 253.0 12.0 188 706-914 2-196 (288)
345 cd07854 STKc_MAPK4_6 Catalytic 99.9 7.6E-27 1.7E-31 259.0 12.4 194 705-914 5-213 (342)
346 cd06641 STKc_MST3 Catalytic do 99.9 1.3E-26 2.7E-31 249.5 13.6 186 706-914 5-195 (277)
347 cd06607 STKc_TAO Catalytic dom 99.9 1.9E-26 4.1E-31 252.0 15.0 183 705-913 15-207 (307)
348 cd07852 STKc_MAPK15 Catalytic 99.9 1.3E-26 2.8E-31 256.9 13.8 195 703-914 5-207 (337)
349 PLN00009 cyclin-dependent kina 99.9 1.9E-26 4.1E-31 250.5 14.7 189 705-914 2-198 (294)
350 KOG4257 Focal adhesion tyrosin 99.9 4.2E-27 9.1E-32 252.6 9.3 186 707-913 391-585 (974)
351 cd06610 STKc_OSR1_SPAK Catalyt 99.9 2.1E-26 4.6E-31 246.2 14.9 195 705-914 1-201 (267)
352 cd07864 STKc_CDK12 Catalytic d 99.9 1.9E-26 4E-31 251.6 14.6 197 702-914 4-212 (302)
353 cd05579 STKc_MAST_like Catalyt 99.9 1.1E-26 2.4E-31 248.0 12.2 188 713-914 1-195 (265)
354 cd07866 STKc_BUR1 Catalytic do 99.9 1.7E-26 3.7E-31 253.0 13.7 202 704-914 7-221 (311)
355 cd06635 STKc_TAO1 Catalytic do 99.9 3E-26 6.4E-31 251.6 15.5 183 706-914 26-218 (317)
356 cd05572 STKc_cGK_PKG Catalytic 99.9 2.4E-26 5.2E-31 245.2 14.2 179 713-914 1-186 (262)
357 cd06657 STKc_PAK4 Catalytic do 99.9 1.4E-26 3.1E-31 250.7 12.7 182 710-914 25-210 (292)
358 cd08226 PK_STRAD_beta Pseudoki 99.9 1.5E-26 3.3E-31 255.2 12.9 191 711-914 4-204 (328)
359 KOG4237 Extracellular matrix p 99.9 1.4E-28 3.1E-33 251.9 -3.3 396 164-600 60-498 (498)
360 cd07877 STKc_p38alpha_MAPK14 C 99.9 2.6E-26 5.7E-31 254.9 14.6 196 697-914 9-212 (345)
361 cd07857 STKc_MPK1 Catalytic do 99.9 2.4E-26 5.2E-31 254.1 14.1 194 706-914 1-204 (332)
362 KOG0576 Mitogen-activated prot 99.9 1E-27 2.2E-32 260.3 2.7 187 705-913 15-208 (829)
363 cd07840 STKc_CDK9_like Catalyt 99.9 2.7E-26 5.8E-31 248.3 13.8 189 707-914 1-196 (287)
364 cd06614 STKc_PAK Catalytic dom 99.9 3.5E-26 7.5E-31 247.3 14.7 190 703-914 17-210 (286)
365 cd07831 STKc_MOK Catalytic dom 99.9 2.8E-26 6E-31 247.5 13.7 186 707-914 1-193 (282)
366 KOG4278 Protein tyrosine kinas 99.9 4E-27 8.7E-32 252.0 6.8 188 705-912 267-458 (1157)
367 cd07835 STKc_CDK1_like Catalyt 99.9 2.4E-26 5.3E-31 248.1 13.0 187 707-914 1-194 (283)
368 cd08225 STKc_Nek5 Catalytic do 99.9 2.3E-26 5.1E-31 244.4 12.2 189 706-914 1-196 (257)
369 KOG4237 Extracellular matrix p 99.9 9.2E-28 2E-32 246.0 1.1 277 79-361 69-359 (498)
370 cd07880 STKc_p38gamma_MAPK12 C 99.9 3.7E-26 8E-31 253.5 13.7 190 703-914 13-210 (343)
371 cd07834 STKc_MAPK Catalytic do 99.9 2.1E-26 4.5E-31 254.6 11.6 194 706-914 1-201 (330)
372 PLN03225 Serine/threonine-prot 99.9 3.1E-26 6.7E-31 266.6 13.5 198 703-914 130-373 (566)
373 cd07838 STKc_CDK4_6_like Catal 99.9 8.3E-26 1.8E-30 244.4 15.7 191 707-914 1-200 (287)
374 cd07879 STKc_p38delta_MAPK13 C 99.9 4.4E-26 9.5E-31 252.9 13.7 188 704-914 14-209 (342)
375 cd05122 PKc_STE Catalytic doma 99.9 6.6E-26 1.4E-30 239.9 14.5 187 706-914 1-191 (253)
376 cd06616 PKc_MKK4 Catalytic dom 99.9 2.8E-26 6.1E-31 248.3 11.8 192 705-914 4-204 (288)
377 cd06627 STKc_Cdc7_like Catalyt 99.9 7E-26 1.5E-30 240.2 14.3 187 706-914 1-193 (254)
378 PTZ00024 cyclin-dependent prot 99.9 4.2E-26 9.2E-31 252.6 13.0 195 705-914 8-228 (335)
379 PLN03224 probable serine/threo 99.9 5.5E-26 1.2E-30 257.3 14.0 202 703-914 143-426 (507)
380 cd05581 STKc_PDK1 Catalytic do 99.9 3.1E-26 6.7E-31 246.8 11.5 196 705-914 1-216 (280)
381 cd06634 STKc_TAO2 Catalytic do 99.9 7.6E-26 1.7E-30 247.2 14.7 184 705-914 15-208 (308)
382 cd08216 PK_STRAD Pseudokinase 99.9 5.3E-26 1.1E-30 249.5 13.2 185 717-914 12-204 (314)
383 cd06633 STKc_TAO3 Catalytic do 99.9 1.1E-25 2.4E-30 246.4 15.7 182 707-914 23-214 (313)
384 cd05611 STKc_Rim15_like Cataly 99.9 8E-26 1.7E-30 240.8 13.6 178 711-914 2-187 (260)
385 cd08215 STKc_Nek Catalytic dom 99.9 9.8E-26 2.1E-30 239.5 14.0 191 706-914 1-197 (258)
386 cd05583 STKc_MSK_N N-terminal 99.9 7.5E-26 1.6E-30 245.0 12.6 188 706-914 1-202 (288)
387 KOG0695 Serine/threonine prote 99.9 1.4E-26 3E-31 231.4 6.1 189 703-913 248-444 (593)
388 cd08528 STKc_Nek10 Catalytic d 99.9 9.6E-26 2.1E-30 241.5 13.2 190 706-914 1-207 (269)
389 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 7.5E-26 1.6E-30 249.2 12.5 188 701-914 6-200 (328)
390 cd06606 STKc_MAPKKK Catalytic 99.9 1.6E-25 3.5E-30 238.0 14.1 191 706-914 1-197 (260)
391 cd08530 STKc_CNK2-like Catalyt 99.9 1.1E-25 2.5E-30 238.9 12.1 189 706-914 1-195 (256)
392 cd07830 STKc_MAK_like Catalyti 99.9 1.5E-25 3.2E-30 242.0 12.9 186 707-914 1-193 (283)
393 cd07829 STKc_CDK_like Catalyti 99.9 1.7E-25 3.7E-30 241.3 12.4 186 707-914 1-193 (282)
394 cd06618 PKc_MKK7 Catalytic dom 99.9 2.1E-25 4.5E-30 242.5 13.0 189 704-914 14-212 (296)
395 KOG0614 cGMP-dependent protein 99.9 4.6E-27 9.9E-32 247.1 -0.6 188 703-913 418-612 (732)
396 cd05118 STKc_CMGC Catalytic do 99.9 2.2E-25 4.7E-30 240.7 12.0 186 707-914 1-193 (283)
397 PLN03210 Resistant to P. syrin 99.9 2E-24 4.4E-29 272.5 22.4 345 95-480 552-904 (1153)
398 cd05123 STKc_AGC Catalytic dom 99.9 3.6E-25 7.7E-30 234.3 13.2 180 713-914 1-187 (250)
399 cd05576 STKc_RPK118_like Catal 99.9 1.8E-25 3.9E-30 234.4 10.7 169 716-914 4-176 (237)
400 cd07851 STKc_p38 Catalytic dom 99.9 1.3E-25 2.7E-30 249.3 9.8 190 703-914 13-210 (343)
401 KOG0668 Casein kinase II, alph 99.9 3.3E-26 7.1E-31 217.9 3.2 184 703-913 36-226 (338)
402 cd05610 STKc_MASTL Catalytic d 99.9 1.2E-24 2.6E-29 260.1 16.8 185 704-910 3-195 (669)
403 PRK09188 serine/threonine prot 99.9 1.6E-24 3.5E-29 235.1 14.7 171 701-896 14-192 (365)
404 cd08222 STKc_Nek11 Catalytic d 99.9 5E-25 1.1E-29 234.7 10.5 190 706-914 1-199 (260)
405 PLN03210 Resistant to P. syrin 99.9 5.5E-24 1.2E-28 268.6 20.6 344 119-504 552-903 (1153)
406 KOG1027 Serine/threonine prote 99.9 5.9E-25 1.3E-29 245.4 10.2 186 707-913 511-707 (903)
407 PRK15387 E3 ubiquitin-protein 99.9 4.7E-24 1E-28 249.3 15.3 265 103-443 203-467 (788)
408 KOG0200 Fibroblast/platelet-de 99.9 5E-24 1.1E-28 250.7 13.8 195 705-914 296-515 (609)
409 PRK15387 E3 ubiquitin-protein 99.9 5.7E-24 1.2E-28 248.6 13.1 246 174-468 223-468 (788)
410 PRK15370 E3 ubiquitin-protein 99.9 9.3E-24 2E-28 248.8 14.5 333 31-410 58-428 (754)
411 KOG0665 Jun-N-terminal kinase 99.9 1.1E-24 2.5E-29 218.3 5.0 187 705-913 17-210 (369)
412 KOG0603 Ribosomal protein S6 k 99.9 4.1E-24 8.8E-29 234.0 7.1 180 704-913 321-506 (612)
413 KOG0670 U4/U6-associated splic 99.9 7.2E-24 1.6E-28 223.8 8.1 191 701-914 428-629 (752)
414 smart00221 STYKc Protein kinas 99.9 4.8E-23 1E-27 213.9 13.4 188 707-914 1-194 (225)
415 KOG1345 Serine/threonine kinas 99.9 1.9E-23 4.1E-28 204.2 8.7 182 705-912 24-217 (378)
416 smart00220 S_TKc Serine/Threon 99.9 1.7E-22 3.8E-27 212.2 11.8 175 717-914 1-180 (244)
417 KOG1290 Serine/threonine prote 99.9 1.6E-22 3.5E-27 213.0 10.9 136 705-849 78-221 (590)
418 PRK15370 E3 ubiquitin-protein 99.9 2E-22 4.3E-27 237.6 12.0 259 67-361 170-428 (754)
419 cd00180 PKc Catalytic domain o 99.9 1.1E-21 2.3E-26 201.2 15.2 180 713-913 1-187 (215)
420 KOG1167 Serine/threonine prote 99.9 3.2E-22 6.9E-27 208.6 10.7 192 700-910 31-268 (418)
421 cd05147 RIO1_euk RIO kinase fa 99.8 9.8E-21 2.1E-25 189.4 12.3 139 710-866 2-167 (190)
422 KOG1164 Casein kinase (serine/ 99.8 3.2E-20 7E-25 203.0 14.2 196 706-914 19-231 (322)
423 KOG1024 Receptor-like protein 99.8 7.4E-21 1.6E-25 194.9 7.8 204 697-913 276-491 (563)
424 cd05145 RIO1_like RIO kinase f 99.8 7.9E-20 1.7E-24 183.8 15.1 139 710-867 2-168 (190)
425 PRK10359 lipopolysaccharide co 99.8 4.8E-20 1E-24 185.7 12.1 174 703-912 29-214 (232)
426 KOG1165 Casein kinase (serine/ 99.8 9.1E-20 2E-24 183.6 13.0 189 706-911 29-227 (449)
427 KOG1163 Casein kinase (serine/ 99.8 8.1E-20 1.8E-24 175.9 12.0 192 704-912 14-213 (341)
428 KOG0617 Ras suppressor protein 99.8 5.7E-21 1.2E-25 174.4 -0.3 165 121-292 29-194 (264)
429 PRK10345 hypothetical protein; 99.8 1.3E-18 2.8E-23 175.3 15.1 142 707-865 4-159 (210)
430 cd00116 LRR_RI Leucine-rich re 99.8 2.6E-21 5.6E-26 212.8 -8.3 258 82-361 3-291 (319)
431 KOG0617 Ras suppressor protein 99.8 1.3E-20 2.8E-25 172.0 -2.7 152 78-234 34-186 (264)
432 cd00116 LRR_RI Leucine-rich re 99.8 1.5E-20 3.3E-25 206.7 -3.3 286 274-602 2-319 (319)
433 PLN00181 protein SPA1-RELATED; 99.8 1.8E-19 4E-24 221.2 4.1 147 759-914 29-209 (793)
434 smart00090 RIO RIO-like kinase 99.8 6.3E-18 1.4E-22 174.9 13.2 144 705-867 28-199 (237)
435 COG0515 SPS1 Serine/threonine 99.7 1.2E-17 2.6E-22 184.3 13.3 190 707-912 2-203 (384)
436 PLN03150 hypothetical protein; 99.7 1.6E-17 3.5E-22 196.0 11.8 151 32-185 368-527 (623)
437 PRK12274 serine/threonine prot 99.7 1E-16 2.2E-21 157.8 13.4 178 708-912 5-199 (218)
438 cd05144 RIO2_C RIO kinase fami 99.7 1.3E-16 2.9E-21 161.8 13.6 143 700-867 10-176 (198)
439 PRK14879 serine/threonine prot 99.7 2.4E-16 5.1E-21 162.1 14.4 135 711-866 2-144 (211)
440 PRK09605 bifunctional UGMP fam 99.7 4.3E-16 9.3E-21 182.3 15.0 138 704-866 332-477 (535)
441 KOG0590 Checkpoint kinase and 99.7 3.8E-17 8.2E-22 189.7 4.9 187 708-913 321-518 (601)
442 TIGR03724 arch_bud32 Kae1-asso 99.7 6.1E-16 1.3E-20 157.4 13.0 131 712-866 1-139 (199)
443 KOG0603 Ribosomal protein S6 k 99.6 2.4E-17 5.2E-22 181.2 -0.4 176 712-913 1-184 (612)
444 cd05119 RIO RIO kinase family, 99.6 5.2E-15 1.1E-19 148.9 12.2 136 710-867 2-165 (187)
445 smart00750 KIND kinase non-cat 99.6 9.1E-16 2E-20 152.8 4.9 94 792-914 1-98 (176)
446 KOG4158 BRPK/PTEN-induced prot 99.6 2.6E-15 5.7E-20 154.9 7.1 142 760-914 274-451 (598)
447 cd05120 APH_ChoK_like Aminogly 99.6 2.7E-14 5.9E-19 138.1 12.7 135 709-865 2-138 (155)
448 KOG0195 Integrin-linked kinase 99.6 4.8E-16 1E-20 152.3 0.4 180 709-913 194-382 (448)
449 PRK01723 3-deoxy-D-manno-octul 99.6 4.8E-14 1E-18 146.4 14.8 140 711-867 37-193 (239)
450 PF14531 Kinase-like: Kinase-l 99.5 6.6E-15 1.4E-19 153.1 6.3 191 706-913 13-243 (288)
451 PLN03150 hypothetical protein; 99.5 2.1E-14 4.6E-19 169.6 10.2 118 519-639 419-538 (623)
452 KOG1166 Mitotic checkpoint ser 99.5 1.2E-14 2.6E-19 171.7 7.9 188 702-913 695-896 (974)
453 KOG1240 Protein kinase contain 99.5 2.5E-15 5.5E-20 173.1 0.5 187 706-914 24-232 (1431)
454 KOG0532 Leucine-rich repeat (L 99.5 3.3E-15 7.2E-20 161.0 -0.9 177 122-308 72-248 (722)
455 KOG0532 Leucine-rich repeat (L 99.5 3.9E-15 8.4E-20 160.5 -1.4 172 398-579 76-247 (722)
456 KOG0606 Microtubule-associated 99.5 1.3E-14 2.8E-19 167.5 1.5 159 703-913 81-251 (1205)
457 COG4886 Leucine-rich repeat (L 99.5 9.4E-14 2E-18 157.3 8.1 198 105-312 97-295 (394)
458 KOG1033 eIF-2alpha kinase PEK/ 99.4 1.5E-14 3.2E-19 156.4 -0.8 122 781-913 330-455 (516)
459 COG4886 Leucine-rich repeat (L 99.4 1.7E-13 3.7E-18 155.1 6.5 196 128-333 96-292 (394)
460 TIGR01982 UbiB 2-polyprenylphe 99.4 1.3E-12 2.9E-17 147.5 11.9 143 710-868 122-309 (437)
461 PRK04750 ubiB putative ubiquin 99.4 2.6E-12 5.6E-17 146.4 11.1 148 704-868 119-316 (537)
462 KOG0590 Checkpoint kinase and 99.3 1.3E-13 2.9E-18 160.2 0.4 191 705-913 20-223 (601)
463 cd05151 ChoK Choline Kinase (C 99.2 3.4E-11 7.5E-16 118.9 10.2 131 710-865 3-136 (170)
464 KOG1023 Natriuretic peptide re 99.2 7.8E-12 1.7E-16 138.6 4.8 140 756-914 1-152 (484)
465 cd05146 RIO3_euk RIO kinase fa 99.2 2.2E-10 4.7E-15 113.4 14.4 136 711-866 3-174 (197)
466 KOG3207 Beta-tubulin folding c 99.2 3E-12 6.6E-17 134.6 -0.2 210 122-332 118-340 (505)
467 KOG0531 Protein phosphatase 1, 99.2 5.7E-12 1.2E-16 142.8 1.4 248 99-363 70-320 (414)
468 KOG1259 Nischarin, modulator o 99.2 5.5E-12 1.2E-16 125.9 0.6 206 118-333 207-414 (490)
469 KOG0531 Protein phosphatase 1, 99.1 1.3E-11 2.9E-16 139.8 1.4 151 172-332 71-222 (414)
470 PF14580 LRR_9: Leucine-rich r 99.1 4.3E-11 9.3E-16 116.0 3.6 109 97-210 15-126 (175)
471 KOG0601 Cyclin-dependent kinas 99.1 6E-11 1.3E-15 131.5 4.8 190 706-912 115-319 (524)
472 KOG1909 Ran GTPase-activating 99.1 4.6E-12 1E-16 129.9 -4.3 244 77-331 30-311 (382)
473 KOG1909 Ran GTPase-activating 99.1 1.3E-12 2.9E-17 133.9 -8.3 255 93-360 22-310 (382)
474 KOG3207 Beta-tubulin folding c 99.1 2.5E-11 5.5E-16 127.8 0.9 143 218-360 169-313 (505)
475 COG3642 Mn2+-dependent serine/ 99.1 2.4E-09 5.2E-14 101.7 13.1 130 711-866 2-141 (204)
476 PF14580 LRR_9: Leucine-rich r 99.0 7.9E-11 1.7E-15 114.1 2.5 57 174-234 20-77 (175)
477 KOG3087 Serine/threonine prote 99.0 2.4E-09 5.2E-14 100.9 12.2 143 709-865 11-165 (229)
478 KOG1259 Nischarin, modulator o 99.0 4.6E-11 1E-15 119.4 0.2 207 141-362 206-413 (490)
479 KOG1266 Protein kinase [Signal 99.0 3E-11 6.6E-16 122.5 -1.8 153 754-913 119-275 (458)
480 cd05154 ACAD10_11_like Acyl-Co 99.0 3E-09 6.5E-14 110.1 12.7 145 711-865 4-206 (223)
481 KOG1243 Protein kinase [Genera 98.9 2E-09 4.2E-14 120.5 9.0 166 723-914 30-197 (690)
482 PF08263 LRRNT_2: Leucine rich 98.9 1.3E-09 2.8E-14 79.4 4.4 39 35-73 2-43 (43)
483 PF13855 LRR_8: Leucine rich r 98.9 1.3E-09 2.7E-14 86.9 3.8 60 519-578 2-61 (61)
484 KOG4658 Apoptotic ATPase [Sign 98.9 1.2E-09 2.6E-14 132.0 5.3 131 98-232 520-653 (889)
485 PF13855 LRR_8: Leucine rich r 98.8 2.1E-09 4.6E-14 85.6 3.8 61 542-602 1-61 (61)
486 PF01163 RIO1: RIO1 family; I 98.8 2.3E-08 5E-13 98.7 11.7 125 720-866 1-156 (188)
487 KOG4658 Apoptotic ATPase [Sign 98.8 3.4E-09 7.4E-14 128.1 6.0 132 122-256 520-653 (889)
488 PRK15123 lipopolysaccharide co 98.8 9.2E-08 2E-12 100.4 15.0 146 711-865 28-194 (268)
489 COG0478 RIO-like serine/threon 98.7 1E-07 2.2E-12 96.3 11.1 136 706-865 92-251 (304)
490 KOG0601 Cyclin-dependent kinas 98.7 1E-08 2.3E-13 114.0 4.0 188 701-913 261-459 (524)
491 KOG1859 Leucine-rich repeat pr 98.7 8.2E-10 1.8E-14 122.9 -5.1 181 414-604 102-293 (1096)
492 KOG3741 Poly(A) ribonuclease s 98.7 1.9E-07 4.1E-12 101.4 12.5 145 719-867 290-444 (655)
493 PF06293 Kdo: Lipopolysacchari 98.5 1.5E-06 3.4E-11 88.3 14.3 111 746-866 55-171 (206)
494 KOG1859 Leucine-rich repeat pr 98.5 4.3E-09 9.3E-14 117.3 -6.6 125 175-307 166-292 (1096)
495 KOG4579 Leucine-rich repeat (L 98.4 1.5E-08 3.2E-13 90.4 -2.3 103 80-186 30-136 (177)
496 KOG2982 Uncharacterized conser 98.4 3.3E-08 7.2E-13 99.4 -0.2 189 99-308 69-263 (418)
497 PRK09902 hypothetical protein; 98.4 5.4E-06 1.2E-10 82.3 14.9 145 711-865 24-179 (216)
498 KOG4579 Leucine-rich repeat (L 98.4 1.9E-08 4.1E-13 89.8 -2.1 134 103-241 29-166 (177)
499 COG0661 AarF Predicted unusual 98.3 1.8E-06 3.9E-11 98.2 10.3 141 711-868 131-317 (517)
500 KOG0606 Microtubule-associated 98.3 8.3E-08 1.8E-12 112.2 -0.8 196 703-912 802-1027(1205)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2e-112 Score=1071.40 Aligned_cols=833 Identities=32% Similarity=0.505 Sum_probs=725.8
Q ss_pred CCHhHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCC
Q 042766 33 TNETDRLALLAIKSQLHDPSGVTSSWNNTMNFCQWTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNG 112 (914)
Q Consensus 33 ~~~~~~~aLl~~k~~~~~~~~~~~~w~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~ 112 (914)
..++|+.||++||+++.+|...+.+|+.+.|||.|.||+|++ .++|+.|||+++.++|.+++.+..+++|++|+|++|+
T Consensus 26 ~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~ 104 (968)
T PLN00113 26 LHAEELELLLSFKSSINDPLKYLSNWNSSADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQ 104 (968)
T ss_pred CCHHHHHHHHHHHHhCCCCcccCCCCCCCCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCc
Confidence 477899999999999988888889998888999999999975 5689999999999999999999999999999999999
Q ss_pred CcccCCcccC-CCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCc
Q 042766 113 FRGDIPQEIG-NLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPD 191 (914)
Q Consensus 113 l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 191 (914)
++|.+|..+. ++++|++|+|++|+++|.+|. +.+++|++|+|++|.+++.+|..++++++|++|+|++|.+++.+|.
T Consensus 105 ~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 182 (968)
T PLN00113 105 LSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPN 182 (968)
T ss_pred cCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCCh
Confidence 9999998765 999999999999999998886 5689999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcc
Q 042766 192 SVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPN 271 (914)
Q Consensus 192 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~ 271 (914)
.++++++|++|+|++|.+++.+|..++++++|++|+|++|++++.+|..+.++++|++|++++|++++.+|.. +.++++
T Consensus 183 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~-l~~l~~ 261 (968)
T PLN00113 183 SLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSS-LGNLKN 261 (968)
T ss_pred hhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChh-HhCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988865 458999
Q ss_pred cceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCc
Q 042766 272 LKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLK 351 (914)
Q Consensus 272 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~ 351 (914)
|++|+|++|++.+.+|..+.++++|++|+|++|++++.+|..+.++++|+.|++++|.+.+. .|..+..+++|+
T Consensus 262 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~------~~~~~~~l~~L~ 335 (968)
T PLN00113 262 LQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGK------IPVALTSLPRLQ 335 (968)
T ss_pred CCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCc------CChhHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999876 566788999999
Q ss_pred EEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeeccc
Q 042766 352 VLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNN 431 (914)
Q Consensus 352 ~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 431 (914)
.|+|++|++++.+|..+..+. +|+.|++++|++++.+|..+..+.+|+.|++++|++.+.+|..+..+++|+.|++++|
T Consensus 336 ~L~L~~n~l~~~~p~~l~~~~-~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n 414 (968)
T PLN00113 336 VLQLWSNKFSGEIPKNLGKHN-NLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDN 414 (968)
T ss_pred EEECcCCCCcCcCChHHhCCC-CCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCC
Confidence 999999999999999998876 7999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCcc
Q 042766 432 FLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLP 511 (914)
Q Consensus 432 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p 511 (914)
++++.+|..|..++.|+.|+|++|.+++.+|..+..+++|+.|++++|++.|.+|..+. ...+ +.|++++|++++.+|
T Consensus 415 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~-~~~L-~~L~ls~n~l~~~~~ 492 (968)
T PLN00113 415 SFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG-SKRL-ENLDLSRNQFSGAVP 492 (968)
T ss_pred EeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc-cccc-eEEECcCCccCCccC
Confidence 99999999999999999999999999999999999999999999999999999887653 4555 899999999999999
Q ss_pred ccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCC
Q 042766 512 LQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSF 591 (914)
Q Consensus 512 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 591 (914)
..|.++++|+.|+|++|++++.+|..+..+++|++|+|++|.+++.+|..|..+++|+.|||++|++++.+|..+.++++
T Consensus 493 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 572 (968)
T PLN00113 493 RKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVES 572 (968)
T ss_pred hhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeCCCCccccccCCCCcCCCCCccCccCCCCCCCCccCCCCCCCCCCCCCCCccceeEEEehhHHHHhHhhhhheee
Q 042766 592 LEFLNLSYNYFEGEVPVKGVFSNKTKISLHGNVKLCGGIDELHLPSCPSKGSRKPKITLLKVLIPVVVSCLLLSSCLTIV 671 (914)
Q Consensus 592 L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~l~~~~c~~~~s~~~~~~~~~v~i~~v~~~~~~~~~~~~~ 671 (914)
|+.|++++|+++|.+|..+++.++...++.||+.+||+.+....+.|..... .....+.+++.++++++++.+++.++
T Consensus 573 L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (968)
T PLN00113 573 LVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRK--TPSWWFYITCTLGAFLVLALVAFGFV 650 (968)
T ss_pred cCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccc--cceeeeehhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999765545567753221 11122222222222122222222222
Q ss_pred heeecccc-ccccCCCc--ccc------ccCccCHHHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC
Q 042766 672 YARKRRST-HKSVDTSP--MEK------LFPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ 742 (914)
Q Consensus 672 ~~~rrr~~-~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~ 742 (914)
++++|+.. .+...... .+. ....+++++ ....|...+.||+|+||.||+|++..+++.||||+++...
T Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~ 727 (968)
T PLN00113 651 FIRGRNNLELKRVENEDGTWELQFFDSKVSKSITIND---ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVN 727 (968)
T ss_pred HHHhhhcccccccccccccccccccccccchhhhHHH---HHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCc
Confidence 22222211 11111100 000 001122222 3346777889999999999999998899999999886332
Q ss_pred CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHH
Q 042766 743 KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822 (914)
Q Consensus 743 ~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i 822 (914)
. ...+|++.+++++|||||+++++|... +..++||||+++|+|.++++ .++|.++.+|+.|+
T Consensus 728 ~----~~~~~~~~l~~l~HpnIv~~~~~~~~~-----~~~~lv~Ey~~~g~L~~~l~---------~l~~~~~~~i~~~i 789 (968)
T PLN00113 728 S----IPSSEIADMGKLQHPNIVKLIGLCRSE-----KGAYLIHEYIEGKNLSEVLR---------NLSWERRRKIAIGI 789 (968)
T ss_pred c----ccHHHHHHHhhCCCCCcceEEEEEEcC-----CCCEEEEeCCCCCcHHHHHh---------cCCHHHHHHHHHHH
Confidence 2 123568899999999999999997543 36799999999999999985 36888999999999
Q ss_pred HHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----h
Q 042766 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----M 898 (914)
Q Consensus 823 ~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~ 898 (914)
++|++|||+.+.++|+|||+||+||+++.++.+++. ||.+...... ....||++|||||++. +
T Consensus 790 a~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~------------~~~~~t~~y~aPE~~~~~~~~ 856 (968)
T PLN00113 790 AKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD------------TKCFISSAYVAPETRETKDIT 856 (968)
T ss_pred HHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC------------CCccccccccCcccccCCCCC
Confidence 999999997766799999999999999999988875 6665432110 1236899999999984 5
Q ss_pred hhcccCcccccccccC
Q 042766 899 LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 899 ~~~Di~s~g~~~~~~f 914 (914)
.++|||||||++|||+
T Consensus 857 ~~sDv~S~Gvvl~el~ 872 (968)
T PLN00113 857 EKSDIYGFGLILIELL 872 (968)
T ss_pred cccchhhHHHHHHHHH
Confidence 8999999999999984
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.6e-65 Score=642.51 Aligned_cols=515 Identities=33% Similarity=0.521 Sum_probs=489.0
Q ss_pred CCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCcc-ccCCcchhccCCCcccCCCChhccccccccccc
Q 042766 101 SFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLS-RCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLS 179 (914)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 179 (914)
.+++.|+|++|+++|.+|..+..+++|++|+|++|+++|.+|..+. .+++|++|+|++|++++.+|. +.+++|++|+
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~ 146 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLD 146 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEE
Confidence 4689999999999999999999999999999999999999998876 999999999999999998886 5689999999
Q ss_pred cccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccC
Q 042766 180 VDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSG 259 (914)
Q Consensus 180 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 259 (914)
|++|.+++.+|..++++++|++|+|++|.+.+.+|.+++++++|++|+|++|++++.+|..++++++|++|+|++|++++
T Consensus 147 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 226 (968)
T PLN00113 147 LSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSG 226 (968)
T ss_pred CcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcc
Q 042766 260 IFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLD 339 (914)
Q Consensus 260 ~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 339 (914)
.+|..+ .++++|++|+|++|++.+.+|..++++++|++|+|++|++++..|..+.++++|++|++++|.+.+.
T Consensus 227 ~~p~~l-~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~------ 299 (968)
T PLN00113 227 EIPYEI-GGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGE------ 299 (968)
T ss_pred cCChhH-hcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccC------
Confidence 888665 5899999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhc
Q 042766 340 FVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISE 419 (914)
Q Consensus 340 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 419 (914)
+|..+.++++|+.|++++|.+.+.+|..+..++ +|+.|++++|.+.+.+|..++.+.+|+.|++++|++++.+|..+..
T Consensus 300 ~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~ 378 (968)
T PLN00113 300 IPELVIQLQNLEILHLFSNNFTGKIPVALTSLP-RLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCS 378 (968)
T ss_pred CChhHcCCCCCcEEECCCCccCCcCChhHhcCC-CCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhC
Confidence 667788999999999999999999999998887 6999999999999999999999999999999999999999999999
Q ss_pred ccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCchhhhcccchhhhh
Q 042766 420 LKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVL 499 (914)
Q Consensus 420 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L 499 (914)
+++|+.|++++|.+.+.+|..+..+++|+.|+|++|++++.+|..+.++++|+.|++++|++++.+|..+..+..+ +.|
T Consensus 379 ~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-~~L 457 (968)
T PLN00113 379 SGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSL-QML 457 (968)
T ss_pred cCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCC-cEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988888888 899
Q ss_pred cccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccc
Q 042766 500 DLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLS 579 (914)
Q Consensus 500 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 579 (914)
++++|++.+.+|..++ .++|+.|||++|++++.+|..|.++++|+.|+|++|++++.+|..+..+++|++|+|++|+++
T Consensus 458 ~L~~n~~~~~~p~~~~-~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 536 (968)
T PLN00113 458 SLARNKFFGGLPDSFG-SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLS 536 (968)
T ss_pred ECcCceeeeecCcccc-cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCccc
Confidence 9999999999987764 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccccccCCCCeEeCCCCccccccCCC-CcCCCCCccCccCCCCCC
Q 042766 580 GKIPEFLENLSFLEFLNLSYNYFEGEVPVK-GVFSNKTKISLHGNVKLC 627 (914)
Q Consensus 580 ~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc 627 (914)
+.+|..+..+++|+.|||++|+++|.+|.. ..+..+..+++++|+..+
T Consensus 537 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 537 GQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred ccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 999999999999999999999999999965 445677888899987544
No 3
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=4.8e-47 Score=386.69 Aligned_cols=473 Identities=27% Similarity=0.390 Sum_probs=295.8
Q ss_pred CCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccccccccccccc
Q 042766 103 LRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDI 182 (914)
Q Consensus 103 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 182 (914)
|+.|++++|.++ .+-+.+.+|..|.+|++.+|+++ +.|++++.+..++.|+.|+|+++ .+|++++++.+|+.|+.+.
T Consensus 47 l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 47 LQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred hhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 344455555555 34444556666666666666665 56666666666666666666665 5666666666666666666
Q ss_pred ccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCccc
Q 042766 183 NYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFP 262 (914)
Q Consensus 183 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 262 (914)
|.+. .+|++++.+..|+.++..+|+++ ..|..++++.+|..|++.+|++....|..+. ++.|++||+..|-++ .+|
T Consensus 124 n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP 199 (565)
T KOG0472|consen 124 NELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLP 199 (565)
T ss_pred ccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCC
Confidence 6666 56666666666666666666666 5566666666666666666666644333333 555555555555554 334
Q ss_pred ccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhh
Q 042766 263 FDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVI 342 (914)
Q Consensus 263 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 342 (914)
+++. .+.+|..|+|.+|+|. .+| .|..++.|.+|+++.|+|+-.+.+....+.++.+|||..|+++..+ +
T Consensus 200 ~~lg-~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~P-------d 269 (565)
T KOG0472|consen 200 PELG-GLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVP-------D 269 (565)
T ss_pred hhhc-chhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCc-------h
Confidence 4443 5556666666666665 455 6777777888888888777555455557777777777777777643 3
Q ss_pred cccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCC--CCcEE-------EcccCc-----
Q 042766 343 FLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLV--NLITF-------TLEVNQ----- 408 (914)
Q Consensus 343 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L-------~L~~N~----- 408 (914)
.+.-+++|++||+|+|.|+ .+|.+++++ +|+.|-+.+|-+..+-.+.+.+=+ =|++| -++.-+
T Consensus 270 e~clLrsL~rLDlSNN~is-~Lp~sLgnl--hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~ 346 (565)
T KOG0472|consen 270 EICLLRSLERLDLSNNDIS-SLPYSLGNL--HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTET 346 (565)
T ss_pred HHHHhhhhhhhcccCCccc-cCCcccccc--eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccc
Confidence 3556677777777777777 566677766 467777777766532111111100 01111 011000
Q ss_pred ----ccccCChhhhcccCCceeeecccccccccCccccCCC---CCCeEEeeCCcCCCCCCCccCCCCCcccc-ccCCCc
Q 042766 409 ----FHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLT---KLGSLDLGSNSLQGNIPSSLGNCQNLILF-IASYNK 480 (914)
Q Consensus 409 ----l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~---~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L-~l~~N~ 480 (914)
..+..| ....+.+.+.|+++.-+++ .+|+...... -.+..+++.|++. ++|..+..++.+... .+++|.
T Consensus 347 ~~t~~~~~~~-~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~ 423 (565)
T KOG0472|consen 347 AMTLPSESFP-DIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNK 423 (565)
T ss_pred cCCCCCCccc-chhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCc
Confidence 001111 1233456777777777777 4554432222 2667777777776 677766666655543 344444
Q ss_pred cCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCc
Q 042766 481 LTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPL 560 (914)
Q Consensus 481 l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 560 (914)
+ +.+|..+..++.+ ..|+|+||.+. .+|..++.+..|+.||+|.|+|. .+|..+..+..|+.+-.++|++..+.|.
T Consensus 424 i-sfv~~~l~~l~kL-t~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~ 499 (565)
T KOG0472|consen 424 I-SFVPLELSQLQKL-TFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPS 499 (565)
T ss_pred c-ccchHHHHhhhcc-eeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChH
Confidence 4 4777777777777 67777777777 67777777777777777777776 6677777777777777777777766666
Q ss_pred chhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccc
Q 042766 561 SFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFE 603 (914)
Q Consensus 561 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 603 (914)
.+.+|.+|..|||.+|.|. .+|..++++.+|++|++++|+|.
T Consensus 500 ~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 500 GLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 6777778888888877776 67777778888888888888776
No 4
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.9e-47 Score=387.37 Aligned_cols=474 Identities=27% Similarity=0.410 Sum_probs=350.8
Q ss_pred CceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhcc
Q 042766 77 QRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCA 156 (914)
Q Consensus 77 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 156 (914)
..++.+++++|.+. .+.+.+.+|..|+.|++++|+++ ++|++++.+..++.|+.|+|+++ .+|+.++.+.+|+.|+.
T Consensus 45 v~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~ 121 (565)
T KOG0472|consen 45 VDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDC 121 (565)
T ss_pred cchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhc
Confidence 34567788888875 46677888888888888888888 78888888888888888888888 88888888888888888
Q ss_pred CCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCC
Q 042766 157 SNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGM 236 (914)
Q Consensus 157 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 236 (914)
++|.+. .+|+.++.+..|..|+..+|+++ ..|+.++++.+|..|++.+|+++...|..+. +++|++||...|-+. .
T Consensus 122 s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-t 197 (565)
T KOG0472|consen 122 SSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-T 197 (565)
T ss_pred ccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-c
Confidence 888887 77888888888888888888888 7788888888888888888888854444444 888888888888887 6
Q ss_pred CCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccc-cccccccccccCccCCcccccccc
Q 042766 237 FPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLS-NASNLELLDLPSNQFKGKVSIDFS 315 (914)
Q Consensus 237 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~ 315 (914)
+|..++.+.+|+.|||.+|++. .+| -|.++..|++|+++.|+|. .+|.... +++++.+|||..|+++ ..|..+.
T Consensus 198 lP~~lg~l~~L~~LyL~~Nki~-~lP--ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~c 272 (565)
T KOG0472|consen 198 LPPELGGLESLELLYLRRNKIR-FLP--EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEIC 272 (565)
T ss_pred CChhhcchhhhHHHHhhhcccc-cCC--CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHH
Confidence 7778888888888888888887 345 2457888888888888888 5555544 7888888888888888 4666777
Q ss_pred ccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhcccc--ccEEE-------Eeeccc--
Q 042766 316 SLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSL--KMIEL-------SVGRNQ-- 384 (914)
Q Consensus 316 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~--~L~~L-------~L~~N~-- 384 (914)
-+++|.+||+++|.|++. |..++++ .|+.|.+.+|.+. .+-..+-.... -|++| -++.-+
T Consensus 273 lLrsL~rLDlSNN~is~L-------p~sLgnl-hL~~L~leGNPlr-TiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~ 343 (565)
T KOG0472|consen 273 LLRSLERLDLSNNDISSL-------PYSLGNL-HLKFLALEGNPLR-TIRREIISKGTQEVLKYLRSKIKDDGLSQSEGG 343 (565)
T ss_pred HhhhhhhhcccCCccccC-------Ccccccc-eeeehhhcCCchH-HHHHHHHcccHHHHHHHHHHhhccCCCCCCccc
Confidence 888888888888888875 4457888 8888888888876 22222211100 01111 000000
Q ss_pred -------ccccCCccccCCCCCcEEEcccCcccccCChhhhcccC---CceeeecccccccccCccccCCCCCC-eEEee
Q 042766 385 -------ISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKN---LQQLSVFNNFLRGGIPSGLGNLTKLG-SLDLG 453 (914)
Q Consensus 385 -------l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~Ls 453 (914)
..+ .......+.+.+.|+++.-+++ .+|+....-.+ ....+++.|++. ++|..+..+..+. .++++
T Consensus 344 ~e~~~t~~~~-~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~ls 420 (565)
T KOG0472|consen 344 TETAMTLPSE-SFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLS 420 (565)
T ss_pred ccccCCCCCC-cccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhh
Confidence 000 1112344557778888888887 44544433333 677888888887 6777666665544 34555
Q ss_pred CCcCCCCCCCccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccc
Q 042766 454 SNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGV 533 (914)
Q Consensus 454 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 533 (914)
+|.++ .+|..+..+++|..|++++|-+. .+|..++.+..+ +.||+|+|+|. .+|.....+..++.+-.++|++..+
T Consensus 421 nn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~L-q~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~v 496 (565)
T KOG0472|consen 421 NNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRL-QTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSV 496 (565)
T ss_pred cCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhh-heecccccccc-cchHHHhhHHHHHHHHhcccccccc
Confidence 55554 77778888888888888888776 788888888776 78888888887 6777777777777777777888877
Q ss_pred cCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccc
Q 042766 534 IPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLS 579 (914)
Q Consensus 534 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 579 (914)
.|..+.+|.+|..|||.+|.+. .+|..++++++|++|++++|.+.
T Consensus 497 d~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 497 DPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 7777888888888888888886 67778888888888888888887
No 5
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=4e-43 Score=372.93 Aligned_cols=369 Identities=21% Similarity=0.240 Sum_probs=335.2
Q ss_pred CCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccc
Q 042766 102 FLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVD 181 (914)
Q Consensus 102 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 181 (914)
.-+.||+++|.++..-+..|.++++|+.+++..|.++ .||...+...+|+.|+|.+|.|+..-.+++..++.|+.||||
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 3478999999999888889999999999999999999 899988888899999999999997777789999999999999
Q ss_pred cccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcc
Q 042766 182 INYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIF 261 (914)
Q Consensus 182 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 261 (914)
.|.|+..--.+|..-.++++|+|++|+++..--..|.++.+|..|.|++|+++...+.+|.++++|+.|+|..|+|. ++
T Consensus 158 rN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~ir-iv 236 (873)
T KOG4194|consen 158 RNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIR-IV 236 (873)
T ss_pred hchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhcccccee-ee
Confidence 99999555567877789999999999999888999999999999999999999888889999999999999999997 44
Q ss_pred cccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchh
Q 042766 262 PFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFV 341 (914)
Q Consensus 262 p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 341 (914)
..-.|.++++|+.|.|..|.+...-...|-.+.++++|+|+.|+++..-.+++.+|+.|+.|+|++|.|..+....
T Consensus 237 e~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~---- 312 (873)
T KOG4194|consen 237 EGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDS---- 312 (873)
T ss_pred hhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecch----
Confidence 4567889999999999999999888899999999999999999999999999999999999999999999985554
Q ss_pred hcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCCh---hhh
Q 042766 342 IFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPD---VIS 418 (914)
Q Consensus 342 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~---~~~ 418 (914)
.+.+++|++|+|++|+|+..-+.++..+. .|++|+|++|+|+..-..+|..+.+|++|||++|.++..+.+ .|.
T Consensus 313 --WsftqkL~~LdLs~N~i~~l~~~sf~~L~-~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~ 389 (873)
T KOG4194|consen 313 --WSFTQKLKELDLSSNRITRLDEGSFRVLS-QLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFN 389 (873)
T ss_pred --hhhcccceeEeccccccccCChhHHHHHH-HhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhc
Confidence 45688999999999999966666777766 799999999999999999999999999999999999977754 588
Q ss_pred cccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCc
Q 042766 419 ELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNK 480 (914)
Q Consensus 419 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 480 (914)
+|++|+.|+|.+|+|+.+.-.+|.++..|++|||.+|.|..+-|++|..+ +|+.|.+..-.
T Consensus 390 gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSss 450 (873)
T KOG4194|consen 390 GLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSS 450 (873)
T ss_pred cchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccc
Confidence 99999999999999997666789999999999999999999999999999 89888776433
No 6
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-43 Score=370.51 Aligned_cols=378 Identities=23% Similarity=0.222 Sum_probs=315.7
Q ss_pred ccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCcccccccccccccc
Q 042766 223 LVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLP 302 (914)
Q Consensus 223 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 302 (914)
-+.||+++|+++.+-+..|.++++|+.+++.+|.++. +|.. .....+|+.|+|.+|.|+.+-.+.++.++.|++||||
T Consensus 80 t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~-IP~f-~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTR-IPRF-GHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred eeeeeccccccccCcHHHHhcCCcceeeeeccchhhh-cccc-cccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 4457777777777767777777777777777777763 4432 2244568888888888887777778888888888888
Q ss_pred CccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeec
Q 042766 303 SNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGR 382 (914)
Q Consensus 303 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~ 382 (914)
.|.|+.+....|..-.++++|+|++|.|+.+.... |.++.+|..|.|+.|+++ .+|...+...++|+.|+|.+
T Consensus 158 rN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~------F~~lnsL~tlkLsrNrit-tLp~r~Fk~L~~L~~LdLnr 230 (873)
T KOG4194|consen 158 RNLISEIPKPSFPAKVNIKKLNLASNRITTLETGH------FDSLNSLLTLKLSRNRIT-TLPQRSFKRLPKLESLDLNR 230 (873)
T ss_pred hchhhcccCCCCCCCCCceEEeecccccccccccc------ccccchheeeecccCccc-ccCHHHhhhcchhhhhhccc
Confidence 88888877778888788888888888888876553 567778888888888888 56655555334788888888
Q ss_pred ccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCC
Q 042766 383 NQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIP 462 (914)
Q Consensus 383 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 462 (914)
|+|.-.---.|.+|.+|+.|.|..|.++..-...|..+.++++|+|+.|+++..-..++.+++.|+.||||+|.|+.+.+
T Consensus 231 N~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~ 310 (873)
T KOG4194|consen 231 NRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHI 310 (873)
T ss_pred cceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeec
Confidence 88885556789999999999999999998888999999999999999999998888889999999999999999998888
Q ss_pred CccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCc---ccc
Q 042766 463 SSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPV---TLS 539 (914)
Q Consensus 463 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~ 539 (914)
++...+++|+.|+|++|+++.--+..+..+..+ ++|.|++|+++..--.+|..+++|+.|||++|.|++.+.+ .|.
T Consensus 311 d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~L-e~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~ 389 (873)
T KOG4194|consen 311 DSWSFTQKLKELDLSSNRITRLDEGSFRVLSQL-EELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFN 389 (873)
T ss_pred chhhhcccceeEeccccccccCChhHHHHHHHh-hhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhc
Confidence 989999999999999999994444455555555 8999999999977778899999999999999999988765 488
Q ss_pred ccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCCCc
Q 042766 540 TCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVKGV 611 (914)
Q Consensus 540 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 611 (914)
+|++|+.|+|.+|+|..+...+|..+..|+.|||.+|.|..+.|++|..+ .|+.|-+..-.|-|+|...|.
T Consensus 390 gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDCql~Wl 460 (873)
T KOG4194|consen 390 GLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCDCQLKWL 460 (873)
T ss_pred cchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccceEEeccHHHH
Confidence 89999999999999998888999999999999999999999999999999 899999999999999987653
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2e-41 Score=349.37 Aligned_cols=188 Identities=29% Similarity=0.497 Sum_probs=166.7
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
...+|...+.||+|+||+||+|+++.++..||||.+.+. ..+..+-+..|+++|+.++|||||++++++.. .+
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~-----~~ 82 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIED-----DD 82 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEec-----CC
Confidence 346888899999999999999999999999999999766 44556778999999999999999999999544 45
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC------Cc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD------MV 854 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~------~~ 854 (914)
+.|+|||||.||||.+|+++++ .+++..+..++.|+|.|+++||++ +||||||||+|||++.. -.
T Consensus 83 ~i~lVMEyC~gGDLs~yi~~~~------~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~ 153 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIRRRG------RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPV 153 (429)
T ss_pred eEEEEEEeCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCce
Confidence 8999999999999999999764 689999999999999999999999 99999999999999865 46
Q ss_pred EEEecccccccccccccccccCCCCccccccCcccccccchh----hhhhcccCccccccccc
Q 042766 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~ 913 (914)
+||+|||+||.+.... .....||+|.|||||++ |+-++|+||+|+++|+|
T Consensus 154 LKIADFGfAR~L~~~~---------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~ 207 (429)
T KOG0595|consen 154 LKIADFGFARFLQPGS---------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQC 207 (429)
T ss_pred EEecccchhhhCCchh---------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHH
Confidence 8999999999886433 22357999999999999 46999999999999986
No 8
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-41 Score=329.75 Aligned_cols=197 Identities=25% Similarity=0.414 Sum_probs=168.9
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
...+|++.++||+|.||+||++.+..+|+.||.|.+... +....++...|+.+|++++|||||++++... .+...
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f---~~~~e 93 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSF---IEDNE 93 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhh---hccch
Confidence 345799999999999999999999999999999999743 4556678999999999999999999987422 23344
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC--cEecCCCCCCeeecCCCcEEEe
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPP--MVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~--ivHrDlkp~NILl~~~~~~ki~ 858 (914)
..+||||||++|+|.++++..+. +.+.+++..+++++.|++.||.++|... ++ |+||||||.||+++.+|.||++
T Consensus 94 vlnivmE~c~~GDLsqmIk~~K~--qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLG 170 (375)
T KOG0591|consen 94 VLNIVMELCDAGDLSQMIKHFKK--QKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLG 170 (375)
T ss_pred hhHHHHHhhcccCHHHHHHHHHh--ccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeec
Confidence 58999999999999999986543 3468999999999999999999999942 24 9999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
|||+++++..... .....+|||+||+||.+. +.++||||+||.+|||
T Consensus 171 DfGL~r~l~s~~t--------fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEM 221 (375)
T KOG0591|consen 171 DFGLGRFLSSKTT--------FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEM 221 (375)
T ss_pred cchhHhHhcchhH--------HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHH
Confidence 9999999865332 223578999999999994 5999999999999998
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.7e-39 Score=331.59 Aligned_cols=188 Identities=30% Similarity=0.430 Sum_probs=159.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-------cchHHHHHHHHHHHhcCCCCcceEEeEeecCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-------GASKSFVSECEALRNIRHRNLIKIITICSSTDF 776 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 776 (914)
.+.|.+.+.+|+|+||.|-+|..+.+++.||||++..... .......+|+++|++++|||||+++++ |
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~-----f 245 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDF-----F 245 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeee-----e
Confidence 4578889999999999999999999999999999974321 122345799999999999999999999 5
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC---C
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---M 853 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~---~ 853 (914)
+.+++.|+||||++||+|.+++-.++ .+.+.....+++|++.|+.|||++ ||+||||||+|||+..+ .
T Consensus 246 ~~~ds~YmVlE~v~GGeLfd~vv~nk------~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~ 316 (475)
T KOG0615|consen 246 EVPDSSYMVLEYVEGGELFDKVVANK------YLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDC 316 (475)
T ss_pred ecCCceEEEEEEecCccHHHHHHhcc------ccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcce
Confidence 55568899999999999999998764 455556678999999999999999 99999999999999766 7
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhh-------hhhcccCcccccccccC
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~f 914 (914)
.+||+|||+|+..... ......||||.|.|||++. ..++|+||+||++|-++
T Consensus 317 llKItDFGlAK~~g~~---------sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcL 375 (475)
T KOG0615|consen 317 LLKITDFGLAKVSGEG---------SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCL 375 (475)
T ss_pred EEEecccchhhccccc---------eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEe
Confidence 8999999999976421 2234589999999999994 35889999999998653
No 10
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-41 Score=377.90 Aligned_cols=484 Identities=28% Similarity=0.336 Sum_probs=320.1
Q ss_pred EEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCC-CccccCCcchhccCCCcccCCCChhcccccccccccccccc
Q 042766 106 INLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPT-NLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINY 184 (914)
Q Consensus 106 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 184 (914)
+|.++.+++ .||..+..-..++.|+++.|.+- ..|- .+.+.-+|+.||+|+|+++ ..|..+..+.+|+.|+++.|.
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~ 79 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNY 79 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhh
Confidence 344444444 45554444444555555555544 2222 2223333666666666655 556666666666666666666
Q ss_pred ccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCccccc
Q 042766 185 LTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFD 264 (914)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 264 (914)
+. ..|.+..++.+|++|.|.+|.+. ..|..+..+++|++|++|.|++. .+|..+..++.++.+..++|.....++
T Consensus 80 i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg-- 154 (1081)
T KOG0618|consen 80 IR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLG-- 154 (1081)
T ss_pred Hh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhc--
Confidence 65 55555666666666666666655 55666666666666666666665 556666666666666666662211111
Q ss_pred ccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcc
Q 042766 265 ILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFL 344 (914)
Q Consensus 265 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l 344 (914)
. ..++.++|..|.+.+.++..+.+++. .|||++|.+. -..+..+.+|+.+....|++.....
T Consensus 155 ---~-~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~~--------- 216 (1081)
T KOG0618|consen 155 ---Q-TSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELEI--------- 216 (1081)
T ss_pred ---c-ccchhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEEe---------
Confidence 1 12667777777777777766666665 6777777766 2335666777777777777766532
Q ss_pred cCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCc
Q 042766 345 SNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQ 424 (914)
Q Consensus 345 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 424 (914)
.-++|+.|+.++|.++...+. ..+.+++++++++|++++ +|++++.+.+|+.++..+|+++ .+|..+....+|+
T Consensus 217 -~g~~l~~L~a~~n~l~~~~~~---p~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~ 290 (1081)
T KOG0618|consen 217 -SGPSLTALYADHNPLTTLDVH---PVPLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLV 290 (1081)
T ss_pred -cCcchheeeeccCcceeeccc---cccccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHH
Confidence 236778888888877732222 223467888888888884 4588888888888888888885 6777778888888
Q ss_pred eeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCC-ccccccCCCccCCCCchhhhcccchhhhhcccC
Q 042766 425 QLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQN-LILFIASYNKLTGDLPQQLLSITTLSLVLDLSN 503 (914)
Q Consensus 425 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~ 503 (914)
.|+..+|.+. .+|.....++.|++|||..|+|....+..+..... |..|+.+.|++. ..|..-......++.|++.+
T Consensus 291 ~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~Lylan 368 (1081)
T KOG0618|consen 291 SLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLS-TLPSYEENNHAALQELYLAN 368 (1081)
T ss_pred HHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccc-ccccccchhhHHHHHHHHhc
Confidence 8888888888 66777777888888888888887444444444443 677777777776 44432222233337888888
Q ss_pred CccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccC
Q 042766 504 NLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIP 583 (914)
Q Consensus 504 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 583 (914)
|.++...-+.+.+.+.|+.|+|++|+|...+...+.++..|++|+||+|+|+ .+|.+...++.|++|...+|+|. ..|
T Consensus 369 N~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP 446 (1081)
T KOG0618|consen 369 NHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP 446 (1081)
T ss_pred CcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech
Confidence 8888777677778888888888888887555566778888888888888887 67788888888888888888887 556
Q ss_pred ccccccCCCCeEeCCCCcccc-ccCCCCcCCCCCccCccCCCCC
Q 042766 584 EFLENLSFLEFLNLSYNYFEG-EVPVKGVFSNKTKISLHGNVKL 626 (914)
Q Consensus 584 ~~~~~l~~L~~L~ls~N~l~~-~~p~~~~~~~~~~~~~~~n~~l 626 (914)
.+..+++|+.+|+|.|+|+- .+|..-...++..+++.||.++
T Consensus 447 -e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 447 -ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred -hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 77778888888888888863 3444333356777788888764
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=326.97 Aligned_cols=190 Identities=26% Similarity=0.362 Sum_probs=168.5
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
..++|++.++||+|+||+||.++.+++++.+|+|++++.. ....+....|..++.+++||.||+++.. |++.
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ys-----FQt~ 97 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYS-----FQTE 97 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEe-----cccC
Confidence 3568999999999999999999999999999999997542 3456788999999999999999999866 7788
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
+..|+|+||+.||+|...+.+. ..+++..+..++.+|+.||.|||+. +|||||+||||||+|.+|+++|+|
T Consensus 98 ~kLylVld~~~GGeLf~hL~~e------g~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtD 168 (357)
T KOG0598|consen 98 EKLYLVLDYLNGGELFYHLQRE------GRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTD 168 (357)
T ss_pred CeEEEEEeccCCccHHHHHHhc------CCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEec
Confidence 8999999999999999999876 3688889999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+|+...... ..+..+|||+.|||||++. +.++|.||+|+++|||.
T Consensus 169 FgL~k~~~~~~--------~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML 219 (357)
T KOG0598|consen 169 FGLCKEDLKDG--------DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEML 219 (357)
T ss_pred cccchhcccCC--------CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHh
Confidence 99998543211 1223489999999999994 69999999999999984
No 12
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-40 Score=368.96 Aligned_cols=488 Identities=27% Similarity=0.321 Sum_probs=367.5
Q ss_pred ceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccC
Q 042766 78 RLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCAS 157 (914)
Q Consensus 78 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 157 (914)
+++.|++..|.+-...-+++..--.|+.|||++|.+. ..|..+..+.+|+.|+++.|.+. ..|.+.+++.+|++|.|.
T Consensus 22 ~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~ 99 (1081)
T KOG0618|consen 22 ALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLK 99 (1081)
T ss_pred HHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheec
Confidence 3677778777653322233434444888999888887 78888888888999999998888 788888888999999998
Q ss_pred CCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCC
Q 042766 158 NNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMF 237 (914)
Q Consensus 158 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 237 (914)
+|.+. ..|..+..+.+|++||+|.|.+. .+|..+..++.++++..++|......+.. . ++.++|..|.+.+.+
T Consensus 100 ~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~----~-ik~~~l~~n~l~~~~ 172 (1081)
T KOG0618|consen 100 NNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQT----S-IKKLDLRLNVLGGSF 172 (1081)
T ss_pred cchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhccc----c-chhhhhhhhhcccch
Confidence 88887 78888888899999999999887 88888888888888888888333233332 2 888888888888888
Q ss_pred CCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCcccccccccc
Q 042766 238 PRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSL 317 (914)
Q Consensus 238 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 317 (914)
+..+..++. .|+|.+|++. .. + ..++++|+.|....|++.... -.-++|+.|+.++|.++...+ -..-
T Consensus 173 ~~~i~~l~~--~ldLr~N~~~-~~--d-ls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~--~p~p 240 (1081)
T KOG0618|consen 173 LIDIYNLTH--QLDLRYNEME-VL--D-LSNLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDV--HPVP 240 (1081)
T ss_pred hcchhhhhe--eeecccchhh-hh--h-hhhccchhhhhhhhcccceEE----ecCcchheeeeccCcceeecc--cccc
Confidence 888877776 7889998886 22 2 237788888888888887332 234678888899998883332 2234
Q ss_pred ccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCC
Q 042766 318 KNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLV 397 (914)
Q Consensus 318 ~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~ 397 (914)
.+|+++++++|+++.. |+|++.+.+|+.++..+|+++ .+|..+.... +|+.|....|.+. .+|....+++
T Consensus 241 ~nl~~~dis~n~l~~l-------p~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~-~L~~l~~~~nel~-yip~~le~~~ 310 (1081)
T KOG0618|consen 241 LNLQYLDISHNNLSNL-------PEWIGACANLEALNANHNRLV-ALPLRISRIT-SLVSLSAAYNELE-YIPPFLEGLK 310 (1081)
T ss_pred ccceeeecchhhhhcc-------hHHHHhcccceEecccchhHH-hhHHHHhhhh-hHHHHHhhhhhhh-hCCCcccccc
Confidence 6888999999988874 567888899999999999996 7888888776 5888888888888 5666777888
Q ss_pred CCcEEEcccCcccccCChhhhcccC-CceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCcccccc
Q 042766 398 NLITFTLEVNQFHGTIPDVISELKN-LQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIA 476 (914)
Q Consensus 398 ~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 476 (914)
.|++|+|..|+|...++..+..+.. |+.|+.+.|++.......=.....|+.|+|.+|.++...-..+.+.++|+.|+|
T Consensus 311 sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhL 390 (1081)
T KOG0618|consen 311 SLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHL 390 (1081)
T ss_pred eeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeee
Confidence 8999999999988555555555544 788888888887433222234567888888888888776677888888888888
Q ss_pred CCCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccc
Q 042766 477 SYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYG 556 (914)
Q Consensus 477 ~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 556 (914)
++|+|. .+|+....-...++.|+||+|+++ .+|..+..++.|++|...+|++. ..| .+..++.|+.+|+|.|+|+.
T Consensus 391 syNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~ 466 (1081)
T KOG0618|consen 391 SYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSE 466 (1081)
T ss_pred cccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhh
Confidence 888887 677665444444478888888888 67788888888888888888887 556 78888888888888888864
Q ss_pred cCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCC
Q 042766 557 VIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYN 600 (914)
Q Consensus 557 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 600 (914)
..-..-..-++|++|||++|.=.-..-..|..++++...+++-|
T Consensus 467 ~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 467 VTLPEALPSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred hhhhhhCCCcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 43222222278888888888732244456666777777777766
No 13
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-38 Score=322.52 Aligned_cols=187 Identities=27% Similarity=0.400 Sum_probs=163.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc-CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
++.+..+.||+|..|+||+|+|+.+++.+|+|++... +....+++.+|++++++++||+||++||.+.... ....
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~----~~is 154 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG----EEIS 154 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC----ceEE
Confidence 3556678999999999999999999999999999644 3445678999999999999999999999965433 1589
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
|+||||++|+|+++++.. ..+++....+|+.+|++||.|||+. .+||||||||+|||+...|.|||+|||.+
T Consensus 155 I~mEYMDgGSLd~~~k~~------g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS 226 (364)
T KOG0581|consen 155 ICMEYMDGGSLDDILKRV------GRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVS 226 (364)
T ss_pred eehhhcCCCCHHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEecccccc
Confidence 999999999999999865 3689999999999999999999963 19999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
+.+... ....++||..|||||.+. +.++||||||.++.|+
T Consensus 227 ~~lvnS----------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~ 270 (364)
T KOG0581|consen 227 GILVNS----------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLEL 270 (364)
T ss_pred HHhhhh----------hcccccccccccChhhhcCCcCCcccceecccHHHHHH
Confidence 876542 123578999999999994 5899999999999886
No 14
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.5e-38 Score=331.00 Aligned_cols=192 Identities=28% Similarity=0.418 Sum_probs=168.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.+.|+..++||+|+||.||+|++..+|+.||+|+++... ++...-..+||.+|++++||||+++.+...+.. ...
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~---~~s 192 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKL---SGS 192 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecC---Cce
Confidence 356888899999999999999999999999999998664 555677889999999999999999999976542 357
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.|+|+|||+. ||.-++...+ ..+++.++..++.|++.||.|||++ +|+|||||.+|||||.+|.+||+|||
T Consensus 193 iYlVFeYMdh-DL~GLl~~p~-----vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFG 263 (560)
T KOG0600|consen 193 IYLVFEYMDH-DLSGLLSSPG-----VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFG 263 (560)
T ss_pred EEEEEecccc-hhhhhhcCCC-----cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEecccc
Confidence 8999999976 9998887654 5799999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchh-----hhhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF-----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~-----~~~~~Di~s~g~~~~~~f 914 (914)
+|+++...... .-+..+-|.+|+|||.+ |+.++|+||.||++.|||
T Consensus 264 LAr~y~~~~~~-------~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~ 314 (560)
T KOG0600|consen 264 LARFYTPSGSA-------PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELF 314 (560)
T ss_pred ceeeccCCCCc-------ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHH
Confidence 99987653321 12345789999999999 579999999999999997
No 15
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.5e-38 Score=314.01 Aligned_cols=188 Identities=24% Similarity=0.362 Sum_probs=160.3
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
+.|+...++|+|+||+||+|++++||+.||||++.... +...+...+|+++|++++|||+|.++++ |+.....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEV-----Frrkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEV-----FRRKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHH-----HHhccee
Confidence 35777889999999999999999999999999996332 3345678999999999999999999998 4555689
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++|+|||+. ++.+-+.+.. ..++...+.++++|++.|+.|+|++ ++|||||||||||++.+|.+|++|||+
T Consensus 77 hLVFE~~dh-TvL~eLe~~p-----~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGF 147 (396)
T KOG0593|consen 77 HLVFEYCDH-TVLHELERYP-----NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGF 147 (396)
T ss_pred EEEeeecch-HHHHHHHhcc-----CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchh
Confidence 999999976 5555555443 4688889999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchh-----hhhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF-----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~-----~~~~~Di~s~g~~~~~~f 914 (914)
|+.+..+. ..-+..+.|.+|+|||.+ +|.++|||++||++.||+
T Consensus 148 AR~L~~pg--------d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~ 196 (396)
T KOG0593|consen 148 ARTLSAPG--------DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELL 196 (396)
T ss_pred hHhhcCCc--------chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHh
Confidence 99886321 111236789999999998 579999999999999985
No 16
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-37 Score=336.05 Aligned_cols=187 Identities=27% Similarity=0.439 Sum_probs=169.5
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.+|...+.||+|||+.||++++..+|+.||+|++... .....+...+||++.+.++|||||+++++ |++...
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~-----FEDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHF-----FEDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeE-----eecCCc
Confidence 5799999999999999999999999999999999753 45567889999999999999999999999 777789
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.|+|.|+|+.++|.+++++. .++++.++..+.+||+.|+.|||+. +|||||||..|++++++.+|||+|||
T Consensus 93 VYivLELC~~~sL~el~Krr------k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKRR------KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred eEEEEEecCCccHHHHHHhc------CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccc
Confidence 99999999999999999855 5799999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
+|..+..++ .+....||||.|+|||++. +..+||||+||++|.+
T Consensus 164 LAt~le~~~--------Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtL 211 (592)
T KOG0575|consen 164 LATQLEYDG--------ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTL 211 (592)
T ss_pred eeeeecCcc--------cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhh
Confidence 999876432 2344689999999999995 5899999999999865
No 17
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-37 Score=337.74 Aligned_cols=205 Identities=42% Similarity=0.694 Sum_probs=175.0
Q ss_pred cCccCHHHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEe
Q 042766 692 FPMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITIC 771 (914)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 771 (914)
...++++++..++++|...+.||+|+||.||+|...++ +.||||++........++|..|++++.+++|||+|+++|||
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45689999999999999999999999999999999754 88999988644332145699999999999999999999999
Q ss_pred ecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC
Q 042766 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY 851 (914)
Q Consensus 772 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~ 851 (914)
...+ ...++|+|||++|+|++++...... .++|.++++||.++|+||+|||+.+.|+||||||||+|||+|+
T Consensus 141 ~e~~----~~~~LVYEym~nGsL~d~L~~~~~~----~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~ 212 (361)
T KOG1187|consen 141 LEGG----EHRLLVYEYMPNGSLEDHLHGKKGE----PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDE 212 (361)
T ss_pred ecCC----ceEEEEEEccCCCCHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECC
Confidence 7544 2589999999999999999876421 7899999999999999999999998889999999999999999
Q ss_pred CCcEEEecccccccccccccccccCCCCccccc-cCcccccccchhh----hhhcccCccccccccc
Q 042766 852 DMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGI-KGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 852 ~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~-~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
++++||+|||+|+...... . ..... .||.+|+|||++. +.++||||||+.+.|+
T Consensus 213 ~~~aKlsDFGLa~~~~~~~-----~---~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllEl 271 (361)
T KOG1187|consen 213 DFNAKLSDFGLAKLGPEGD-----T---SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLEL 271 (361)
T ss_pred CCCEEccCccCcccCCccc-----c---ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHH
Confidence 9999999999997543200 0 00011 7999999999995 4899999999988765
No 18
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=329.48 Aligned_cols=200 Identities=27% Similarity=0.407 Sum_probs=172.8
Q ss_pred HHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCC
Q 042766 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNI-RHRNLIKIITICSSTDF 776 (914)
Q Consensus 701 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 776 (914)
.+...+|.+.+.||+|+|++|++|+.+.+++.||||++.++ .+...+...+|-++|.++ .||.|++++.- |
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~T-----F 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFT-----F 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEE-----e
Confidence 44567899999999999999999999999999999999643 344556788899999999 89999999977 6
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEE
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAH 856 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 856 (914)
++....|+|+||+++|+|.++|++.+ .+++..+..++.||+.|++|||++ |||||||||||||+|.||++|
T Consensus 144 QD~~sLYFvLe~A~nGdll~~i~K~G------sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhik 214 (604)
T KOG0592|consen 144 QDEESLYFVLEYAPNGDLLDLIKKYG------SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIK 214 (604)
T ss_pred ecccceEEEEEecCCCcHHHHHHHhC------cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEE
Confidence 66678999999999999999999874 688999999999999999999999 999999999999999999999
Q ss_pred Eecccccccccccccc-----cccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 857 VGDFGLAKFLSNHHLD-----IASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 857 i~DFGla~~~~~~~~~-----~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+|||.|+.+.+.... ...........++||..|.+||++. +..+|+|+|||++|+|.
T Consensus 215 ITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQml 281 (604)
T KOG0592|consen 215 ITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQML 281 (604)
T ss_pred EeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHh
Confidence 9999999998764332 1111111235689999999999995 69999999999999983
No 19
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=6.8e-37 Score=297.78 Aligned_cols=188 Identities=27% Similarity=0.410 Sum_probs=163.7
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|...+.+|+|+||.||+|++..+|+.||||+++... ++......+|++.|+.++|+||+.+++++ ...+..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F-----~~~~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVF-----PHKSNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhc-----cCCCce
Confidence 46888899999999999999999999999999998553 33456789999999999999999999984 444578
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
.+|+|||+. +|+..++... ..++..+...++.++.+|++|||++ .|+|||+||.|+|++.+|.+||+|||+
T Consensus 77 ~lVfEfm~t-dLe~vIkd~~-----i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGL 147 (318)
T KOG0659|consen 77 SLVFEFMPT-DLEVVIKDKN-----IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGL 147 (318)
T ss_pred EEEEEeccc-cHHHHhcccc-----cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccc
Confidence 999999975 9999998764 6789999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+.+..... .....+-|.+|+|||.++ +..+|+||.||++.|++
T Consensus 148 Ar~f~~p~~--------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELl 196 (318)
T KOG0659|consen 148 ARFFGSPNR--------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELL 196 (318)
T ss_pred hhccCCCCc--------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHH
Confidence 998764331 112236899999999985 58999999999999873
No 20
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.3e-38 Score=339.98 Aligned_cols=367 Identities=26% Similarity=0.411 Sum_probs=194.6
Q ss_pred CCCCCCEEEcCCCCCc-ccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccc
Q 042766 99 NLSFLRYINLADNGFR-GDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQR 177 (914)
Q Consensus 99 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 177 (914)
=|+..|-.|+++|.|+ +..|.....+++++-|.|...++. .+|+.++++.+|++|.+++|++. .+-..++.|+.|+.
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRs 82 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRS 82 (1255)
T ss_pred ccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHH
Confidence 3555666677777776 356666666666777766666665 66666666666666666666665 44455666666666
Q ss_pred cccccccccC-cCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCc
Q 042766 178 LSVDINYLTG-QLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENR 256 (914)
Q Consensus 178 L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 256 (914)
+++..|++.. -+|..+..|..|..||||+|+++ ..|..+..-+++.+|+||+|+|.
T Consensus 83 v~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie---------------------- 139 (1255)
T KOG0444|consen 83 VIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE---------------------- 139 (1255)
T ss_pred HhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc----------------------
Confidence 6666666542 24444555555555555555555 44555555555555555555554
Q ss_pred ccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCC
Q 042766 257 FSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTAN 336 (914)
Q Consensus 257 l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 336 (914)
.+|..+|.+++.|-.||||+|++. .+|..+..+..|++|+||+|.+....-..+..+++|++|.+++.+=+-.
T Consensus 140 ---tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~--- 212 (1255)
T KOG0444|consen 140 ---TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLD--- 212 (1255)
T ss_pred ---cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhh---
Confidence 234455556666666666666665 4555566666666666666665543333444555566666655443221
Q ss_pred CcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChh
Q 042766 337 DLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDV 416 (914)
Q Consensus 337 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 416 (914)
.+|..+..+.+|..+|||.|.+. .+|+++..+. +|+.|+|++|+|+ .+....+.+.+|++|+||.|+++ .
T Consensus 213 --N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~-~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~---- 282 (1255)
T KOG0444|consen 213 --NIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLR-NLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-V---- 282 (1255)
T ss_pred --cCCCchhhhhhhhhccccccCCC-cchHHHhhhh-hhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-c----
Confidence 14444555555666666666555 4444444333 2333333333333 12222333344444444444444 3
Q ss_pred hhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCC-CCCCccCCCCCccccccCCCccCCCCchhhhcccch
Q 042766 417 ISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQG-NIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTL 495 (914)
Q Consensus 417 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l 495 (914)
+|++++++++|+.|++.+|+++- -+|+.++++.+|+.+..++|++. .+|.+++.+..+
T Consensus 283 --------------------LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL 341 (1255)
T KOG0444|consen 283 --------------------LPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKL 341 (1255)
T ss_pred --------------------chHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHH
Confidence 44444444444444444444431 24444444444444444444444 444444444444
Q ss_pred hhhhcccCCccCCCccccccccccceeecccCCcc
Q 042766 496 SLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQF 530 (914)
Q Consensus 496 ~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 530 (914)
+.|.|+.|++- .+|.++.-|+.|+.|||.+|.=
T Consensus 342 -~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 342 -QKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred -HHhccccccee-echhhhhhcCCcceeeccCCcC
Confidence 44444444444 4455555555555666655543
No 21
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=9.2e-37 Score=305.52 Aligned_cols=191 Identities=23% Similarity=0.382 Sum_probs=167.4
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
..++|+..+.|++|+||.||||+++.+++.||+|+++++. .+..-...+||.++.+++|||||.+.++..... .+
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~---~d 150 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN---MD 150 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc---cc
Confidence 4568999999999999999999999999999999998654 334456789999999999999999999976554 34
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..|+|||||+. ||...+...+ +++...++..++.|+++|++|||++ .|+||||||+|+|+...|.+||+||
T Consensus 151 ~iy~VMe~~Eh-DLksl~d~m~-----q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDF 221 (419)
T KOG0663|consen 151 KIYIVMEYVEH-DLKSLMETMK-----QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADF 221 (419)
T ss_pred eeeeeHHHHHh-hHHHHHHhcc-----CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEeccc
Confidence 68999999976 9999998754 6899999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchh-----hhhhcccCccccccccc
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF-----FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~-----~~~~~Di~s~g~~~~~~ 913 (914)
|+||.+..+. ..-+..+-|.+|+|||.+ ++.++|+||+||++.||
T Consensus 222 GLAR~ygsp~--------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~ 271 (419)
T KOG0663|consen 222 GLAREYGSPL--------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAEL 271 (419)
T ss_pred chhhhhcCCc--------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHH
Confidence 9999886542 122346789999999999 46999999999999886
No 22
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-36 Score=312.99 Aligned_cols=195 Identities=30% Similarity=0.473 Sum_probs=165.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
..+|...+.||+|+||.||.+.+.++|+..|||.+...+....+.+.+|+.+|++++|||||+++|...... . ...+
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~--~-~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRE--N-DEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCcccccc--C-eeeE
Confidence 346778899999999999999999889999999997654333677899999999999999999999643322 1 3688
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC-CCcEEEecccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY-DMVAHVGDFGL 862 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DFGl 862 (914)
+.|||+++|+|.+++.+.++ .+++..+.++++||++||+|||++ +||||||||+|||++. ++.+||+|||+
T Consensus 93 i~mEy~~~GsL~~~~~~~g~-----~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~ 164 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGG-----KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGL 164 (313)
T ss_pred eeeeccCCCcHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcc
Confidence 99999999999999997642 589999999999999999999999 9999999999999999 79999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-h----hhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-M----LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-~----~~~Di~s~g~~~~~~f 914 (914)
|+..... .........+.||+.|||||++. + .++||||+|||++|||
T Consensus 165 a~~~~~~-----~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~ 216 (313)
T KOG0198|consen 165 AKKLESK-----GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEML 216 (313)
T ss_pred ccccccc-----cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEecc
Confidence 9876531 01112233578999999999997 3 3899999999999997
No 23
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=299.94 Aligned_cols=185 Identities=25% Similarity=0.327 Sum_probs=165.9
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|+..+.+|.|+||.|..++++.+|..+|+|++++.+ ....+...+|..+|+.+.||.++++++-+ .+..
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~-----~d~~ 117 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTF-----KDNS 117 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEee-----ccCC
Confidence 357889999999999999999999999999999997554 23445678899999999999999999874 4455
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||++||.|..++++. .++++..+..+|.||+.|++|||+. +|++||+||||||+|.+|.+||+||
T Consensus 118 ~lymvmeyv~GGElFS~Lrk~------~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDF 188 (355)
T KOG0616|consen 118 NLYMVMEYVPGGELFSYLRKS------GRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDF 188 (355)
T ss_pred eEEEEEeccCCccHHHHHHhc------CCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEec
Confidence 899999999999999999876 4689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
|+|+.+.+. ....||||.|+|||+++ +.++|-|+||+.+|||
T Consensus 189 GFAK~v~~r-----------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEM 234 (355)
T KOG0616|consen 189 GFAKRVSGR-----------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEM 234 (355)
T ss_pred cceEEecCc-----------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHH
Confidence 999976432 34579999999999995 6999999999999998
No 24
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=7.7e-36 Score=317.99 Aligned_cols=198 Identities=23% Similarity=0.340 Sum_probs=168.4
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
...++|+....||+|+||.||.|+.+.||+.+|+|++++.. ....+....|-.+|...++|.||++|.. |++
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs-----FQD 212 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYS-----FQD 212 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEE-----ecC
Confidence 35678999999999999999999999999999999997543 4556778889999999999999999976 777
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
.++.|+||||++|||+..++.+. ..+++..+..++.+++-|+.-+|.. |+|||||||+|+|||..|++|++
T Consensus 213 ~~~LYLiMEylPGGD~mTLL~~~------~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLS 283 (550)
T KOG0605|consen 213 KEYLYLIMEYLPGGDMMTLLMRK------DTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLS 283 (550)
T ss_pred CCeeEEEEEecCCccHHHHHHhc------CcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeec
Confidence 78999999999999999999876 4789999999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccc-----------------cccCC----CC------------------ccccccCcccccccchhh--
Q 042766 859 DFGLAKFLSNHHLD-----------------IASKT----PS------------------SSIGIKGTVGYVAPGKFF-- 897 (914)
Q Consensus 859 DFGla~~~~~~~~~-----------------~~~~~----~~------------------~~~~~~GT~~y~APE~~~-- 897 (914)
|||+++-+...+.. ..... +. .....+|||.|||||++.
T Consensus 284 DFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~k 363 (550)
T KOG0605|consen 284 DFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGK 363 (550)
T ss_pred cccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcC
Confidence 99999654321100 00000 00 013578999999999995
Q ss_pred --hhhcccCccccccccc
Q 042766 898 --MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 898 --~~~~Di~s~g~~~~~~ 913 (914)
+..+|.||+||++|||
T Consensus 364 gY~~~cDwWSLG~ImyEm 381 (550)
T KOG0605|consen 364 GYGKECDWWSLGCIMYEM 381 (550)
T ss_pred CCCccccHHHHHHHHHHH
Confidence 5889999999999998
No 25
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.2e-37 Score=332.53 Aligned_cols=384 Identities=24% Similarity=0.380 Sum_probs=223.9
Q ss_pred cccccccccccccc-CcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceee
Q 042766 173 LKLQRLSVDINYLT-GQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIF 251 (914)
Q Consensus 173 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 251 (914)
+-.+-.|+++|.++ +..|.....++++++|.|...++. .+|+.++.+.+|++|.+++|++. .+-..+..++.|+.++
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVI 84 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHh
Confidence 33444555555555 345555666666666666666665 55666666666666666666665 3334455566666666
Q ss_pred ccCCccc-CcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcC
Q 042766 252 LTENRFS-GIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNL 330 (914)
Q Consensus 252 L~~N~l~-~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 330 (914)
+..|++. .-+|.++| .+..|+.||||+|++. ..|..+...+++-+|+||+|+|..++...|.+++.|-.|||++|++
T Consensus 85 ~R~N~LKnsGiP~diF-~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrL 162 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIF-RLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRL 162 (1255)
T ss_pred hhccccccCCCCchhc-ccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchh
Confidence 6666653 23455666 6667777777777776 5666677777777777777777766666666777777777777776
Q ss_pred CCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCccc
Q 042766 331 GTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFH 410 (914)
Q Consensus 331 ~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 410 (914)
... |.....+..|++|+|++|.+...--. .+-.+++|++|.+++.+=+
T Consensus 163 e~L-------PPQ~RRL~~LqtL~Ls~NPL~hfQLr-------------------------QLPsmtsL~vLhms~TqRT 210 (1255)
T KOG0444|consen 163 EML-------PPQIRRLSMLQTLKLSNNPLNHFQLR-------------------------QLPSMTSLSVLHMSNTQRT 210 (1255)
T ss_pred hhc-------CHHHHHHhhhhhhhcCCChhhHHHHh-------------------------cCccchhhhhhhcccccch
Confidence 654 33355666667777777665411000 0112333444444433221
Q ss_pred -ccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCchhh
Q 042766 411 -GTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQL 489 (914)
Q Consensus 411 -~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 489 (914)
..+|.++..+.+|..+|||.|.+. .+|+.+.++.+|+.|+||+|+|+ .+.-..+...+|+.|++|.|+++ .+|..+
T Consensus 211 l~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~av 287 (1255)
T KOG0444|consen 211 LDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAV 287 (1255)
T ss_pred hhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHH
Confidence 234444444444444444444444 44444444444444444444444 33333344444555555555554 445555
Q ss_pred hcccchhhhhcccCCccC-CCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCC
Q 042766 490 LSITTLSLVLDLSNNLLN-GSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSI 568 (914)
Q Consensus 490 ~~~~~l~~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 568 (914)
..++.+ +.|++.+|+++ .-+|..++.|.+|+.+..++|.+. ..|..+..|..|+.|.|++|++. ..|.++.-|+.|
T Consensus 288 cKL~kL-~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l 364 (1255)
T KOG0444|consen 288 CKLTKL-TKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDL 364 (1255)
T ss_pred hhhHHH-HHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCc
Confidence 555544 44555555443 236777788888888888888887 67888888888888888888886 678888888888
Q ss_pred CEEEccCCccccccCccccccCCCCeEeCC
Q 042766 569 KALNVSSNNLSGKIPEFLENLSFLEFLNLS 598 (914)
Q Consensus 569 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 598 (914)
+.|||..|.=--..|.--..-+.|+.-++.
T Consensus 365 ~vLDlreNpnLVMPPKP~da~~~lefYNID 394 (1255)
T KOG0444|consen 365 KVLDLRENPNLVMPPKPNDARKKLEFYNID 394 (1255)
T ss_pred ceeeccCCcCccCCCCcchhhhcceeeecc
Confidence 888888886443444322222455554443
No 26
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.3e-36 Score=320.74 Aligned_cols=187 Identities=33% Similarity=0.481 Sum_probs=166.7
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|.+.+.||+|.||.||+|+.+.+.+.||+|.+.+.. +++.+.+.+|++++++++|||||.++++ |+...+.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~es-----fEt~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLES-----FETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHh-----hcccceE
Confidence 46888899999999999999999999999999997543 3445678999999999999999999988 6777799
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
|+|.||+.| +|..++... ..+++..+..|+.|++.||.|||+. +|+|||+||.|||++..|++|++|||+
T Consensus 77 ~vVte~a~g-~L~~il~~d------~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~ 146 (808)
T KOG0597|consen 77 WVVTEYAVG-DLFTILEQD------GKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGL 146 (808)
T ss_pred EEEehhhhh-hHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhh
Confidence 999999976 999999876 4689999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~f 914 (914)
|+....... ....+.|||.|||||++ ++..+|.||+||++||||
T Consensus 147 Ar~m~~~t~--------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~ 194 (808)
T KOG0597|consen 147 ARAMSTNTS--------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELY 194 (808)
T ss_pred hhhcccCce--------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHh
Confidence 997654321 22346799999999999 468999999999999986
No 27
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-36 Score=320.20 Aligned_cols=188 Identities=25% Similarity=0.398 Sum_probs=168.8
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
...|...++||+|+.|.||.|+...+++.||||++....+...+-+.+|+.+|+..+|+|||.+++-|... +..|
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-----deLW 346 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG-----DELW 346 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc-----ceeE
Confidence 34677788999999999999999999999999999988888888899999999999999999999875433 5899
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+|||||+||+|.+.+... .+++.+...|++++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++
T Consensus 347 VVMEym~ggsLTDvVt~~-------~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFc 416 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVTKT-------RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFC 416 (550)
T ss_pred EEEeecCCCchhhhhhcc-------cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeee
Confidence 999999999999998753 589999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~f 914 (914)
..+..... .....+|||+|||||++ +|.++||||+|+..+||+
T Consensus 417 aqi~~~~~--------KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMv 463 (550)
T KOG0578|consen 417 AQISEEQS--------KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMV 463 (550)
T ss_pred eccccccC--------ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHh
Confidence 87654321 23457899999999999 589999999999999996
No 28
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=315.80 Aligned_cols=190 Identities=26% Similarity=0.419 Sum_probs=163.9
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchH-HHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCc
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASK-SFVSECEALRNIR-HRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~ 780 (914)
..++|...++||.|+||.||+|+...+++.||||+++.+-....+ .-.||+..|++++ |||||++.+++.+.+ .
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~----~ 83 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDND----R 83 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccC----c
Confidence 346899999999999999999999999999999999755444333 3468999999998 999999999854332 3
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++|||||+ .+|++.+++++ +.+++..++.|+.||++||+|+|.+ |+.|||+||||||+.....+||+||
T Consensus 84 ~L~fVfE~Md-~NLYqLmK~R~-----r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDF 154 (538)
T KOG0661|consen 84 ILYFVFEFMD-CNLYQLMKDRN-----RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADF 154 (538)
T ss_pred eEeeeHHhhh-hhHHHHHhhcC-----CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccc
Confidence 8999999995 59999998764 6899999999999999999999999 9999999999999998889999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchh-----hhhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF-----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~-----~~~~~Di~s~g~~~~~~f 914 (914)
|+||.+.... +. +..+.|.+|+|||++ |+.+.|+|++||+.+|.+
T Consensus 155 GLARev~Skp-------PY--TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~ 204 (538)
T KOG0661|consen 155 GLAREVRSKP-------PY--TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELY 204 (538)
T ss_pred ccccccccCC-------Cc--chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHH
Confidence 9999765321 11 246799999999998 469999999999999863
No 29
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-35 Score=316.20 Aligned_cols=188 Identities=35% Similarity=0.532 Sum_probs=157.7
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcc--hHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--SKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
++...+.+|+|+||+||+|.++++ ..||||++...+... .++|.+|+.+|++++|||||+++|+|.... ...+
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~-~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~----~~~~ 116 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGT-DVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP----GSLC 116 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCc-eeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC----CceE
Confidence 344456699999999999999743 239999997543222 569999999999999999999999986543 2578
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC-cEecCCCCCCeeecCCC-cEEEeccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPP-MVHGDLKPSNVLLDYDM-VAHVGDFG 861 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~-ivHrDlkp~NILl~~~~-~~ki~DFG 861 (914)
+||||+++|+|.+++.... ...+++..+++++.|||+||.|||++ + ||||||||+|||++.++ ++||+|||
T Consensus 117 iVtEy~~~GsL~~~l~~~~----~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFG 189 (362)
T KOG0192|consen 117 IVTEYMPGGSLSVLLHKKR----KRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFG 189 (362)
T ss_pred EEEEeCCCCcHHHHHhhcc----cCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCc
Confidence 9999999999999998741 26899999999999999999999999 6 99999999999999997 99999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh------hhhcccCccccccccc
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~~~~~~ 913 (914)
+++...... .......||+.|||||++. +.++||||||+++.|+
T Consensus 190 lsr~~~~~~--------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl 239 (362)
T KOG0192|consen 190 LSREKVISK--------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWEL 239 (362)
T ss_pred cceeecccc--------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHH
Confidence 998754321 1122357999999999996 3899999999999886
No 30
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1e-34 Score=298.11 Aligned_cols=197 Identities=24% Similarity=0.420 Sum_probs=165.7
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCC-cceEEeEeecCC-CCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRN-LIKIITICSSTD-FEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~-~~~~ 779 (914)
...|+..++||+|+||+||+|+.+.+|+.||+|+++... ++......+|+.+++.++|+| |+.+++++.... ++..
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 456777888999999999999999999999999998653 346677899999999999999 999999976543 2334
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||++ -+|.+++....... ..++...+..+++|++.||+|||++ +|+||||||+|||++++|.+||+|
T Consensus 90 ~~l~lvfe~~d-~DL~~ymd~~~~~~--~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaD 163 (323)
T KOG0594|consen 90 GKLYLVFEFLD-RDLKKYMDSLPKKP--QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLAD 163 (323)
T ss_pred ceEEEEEEeec-ccHHHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeec
Confidence 47889999995 59999998754211 3566688999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
||+|+.+.-+. ..-+..++|..|.|||++. +...||||+||+++|||
T Consensus 164 FGlAra~~ip~--------~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~ 215 (323)
T KOG0594|consen 164 FGLARAFSIPM--------RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMF 215 (323)
T ss_pred cchHHHhcCCc--------ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHH
Confidence 99999654221 1123457999999999995 58999999999999996
No 31
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=300.20 Aligned_cols=194 Identities=25% Similarity=0.323 Sum_probs=167.2
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.++|+..++||.|..++||+|++..+++.||||++..++- ...+.+.+|+..|+.++||||++++..+. .....
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFv-----v~~~L 99 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFV-----VDSEL 99 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEE-----eccee
Confidence 4689999999999999999999999999999999986643 33588999999999999999999988744 34589
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
|+||.||.+|++.++++..-. ..+++..+..|.+++++||.|||.+ |.||||+|+.||||+.+|.|||+|||.
T Consensus 100 WvVmpfMa~GS~ldIik~~~~----~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgv 172 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYP----DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGV 172 (516)
T ss_pred EEeehhhcCCcHHHHHHHHcc----ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCcee
Confidence 999999999999999987643 4688999999999999999999999 999999999999999999999999998
Q ss_pred cccccccccccccCCCCccccccCcccccccchh------hhhhcccCccccccccc
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF------FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~------~~~~~Di~s~g~~~~~~ 913 (914)
+..+.+.... . ..+...++||+.|||||++ |+.++||||||+|..|+
T Consensus 173 sa~l~~~G~R-~---~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~EL 225 (516)
T KOG0582|consen 173 SASLFDSGDR-Q---VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACEL 225 (516)
T ss_pred eeeecccCce-e---eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHH
Confidence 7766553311 1 1111567999999999995 56999999999998875
No 32
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.3e-35 Score=299.73 Aligned_cols=191 Identities=27% Similarity=0.423 Sum_probs=158.6
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
-.|...+++|+|+||.||+|+...+++.||||++-.+.+. -.+|+++|++++|||||++..++....-.+.-+..+
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 3577789999999999999999999999999988544332 246999999999999999998877654332346678
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC-CcEEEeccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGLA 863 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~-~~~ki~DFGla 863 (914)
||||||. +|.++++.... ....++...+.-+++|+.+|++|||+. +|+||||||+|+|+|.+ |.+||+|||.|
T Consensus 100 VleymP~-tL~~~~r~~~~--~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTR--ANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHHhchH-HHHHHHHHHhh--cCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcc
Confidence 9999975 99999985311 125678888889999999999999998 99999999999999977 99999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+.+...+. .....-|..|+|||.++ +.+.||||.||++.||+
T Consensus 174 K~L~~~ep---------niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl 220 (364)
T KOG0658|consen 174 KVLVKGEP---------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELL 220 (364)
T ss_pred eeeccCCC---------ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHh
Confidence 98754331 23456789999999995 58999999999999985
No 33
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-34 Score=307.71 Aligned_cols=189 Identities=30% Similarity=0.515 Sum_probs=160.5
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
+.++..+.||+|.||+||.|++.. ...||+|.++.. ....++|.+|+++|++++|++||+++|+|.... ..+|
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~-----piyI 278 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQE-----PIYI 278 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcC-CCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCC-----ceEE
Confidence 455667889999999999999974 347999999744 345578999999999999999999999986533 6899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
|||||+.|+|.+|++... ...+...+.+.++.|||+||+||.++ ++|||||.++||||+++..+||+|||+||
T Consensus 279 VtE~m~~GsLl~yLr~~~----~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr 351 (468)
T KOG0197|consen 279 VTEYMPKGSLLDYLRTRE----GGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLAR 351 (468)
T ss_pred EEEecccCcHHHHhhhcC----CCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEccccccc
Confidence 999999999999998733 25788899999999999999999999 99999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~f 914 (914)
...++.+.... +..-...|.|||.+ ++.++||||||++++|||
T Consensus 352 ~~~d~~Y~~~~-------~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~f 398 (468)
T KOG0197|consen 352 LIGDDEYTASE-------GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELF 398 (468)
T ss_pred ccCCCceeecC-------CCCCCceecCHHHHhhCCcccccceeehhhhHHHHh
Confidence 65554432211 12234579999999 579999999999999997
No 34
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-34 Score=298.15 Aligned_cols=197 Identities=25% Similarity=0.334 Sum_probs=160.6
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--------------CcchHHHHHHHHHHHhcCCCCcceE
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--------------KGASKSFVSECEALRNIRHRNLIKI 767 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~E~~~l~~l~h~niv~l 767 (914)
+...+|++.+.||+|.||+|-+|++..+++.||||++.+.. ....+...+||.+|+++.|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 45578999999999999999999999999999999996432 1123578999999999999999999
Q ss_pred EeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCe
Q 042766 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNV 847 (914)
Q Consensus 768 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NI 847 (914)
+++-.+.. .+..|||+|||..|.+...-... ..+++.++++|+++++.||+|||.+ +||||||||+|+
T Consensus 174 iEvLDDP~---s~~~YlVley~s~G~v~w~p~d~------~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNL 241 (576)
T KOG0585|consen 174 IEVLDDPE---SDKLYLVLEYCSKGEVKWCPPDK------PELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNL 241 (576)
T ss_pred EEeecCcc---cCceEEEEEeccCCccccCCCCc------ccccHHHHHHHHHHHHHHHHHHHhc---Ceeccccchhhe
Confidence 99854433 35789999999988876532221 2288999999999999999999999 999999999999
Q ss_pred eecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh--------hhhcccCccccccccc
Q 042766 848 LLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF--------MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 848 Ll~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~--------~~~~Di~s~g~~~~~~ 913 (914)
|++++|+|||+|||.+..+.... +. .....-...+|||.|||||... +.+.||||+|+|+|-|
T Consensus 242 Ll~~~g~VKIsDFGVs~~~~~~~-~~--~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCl 312 (576)
T KOG0585|consen 242 LLSSDGTVKISDFGVSNEFPQGS-DE--GSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCL 312 (576)
T ss_pred EEcCCCcEEeeccceeeecccCC-cc--ccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHh
Confidence 99999999999999998764321 10 1111222368999999999974 5899999999999854
No 35
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-34 Score=293.38 Aligned_cols=194 Identities=26% Similarity=0.368 Sum_probs=169.2
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEee--ccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
..|...+.||+|+||.|+.|+++.+|+.||||++. .+.....++..+|+++++.++|+||+.++++......+.-...
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 45666789999999999999999999999999996 5666677899999999999999999999999876555555678
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
|+|+|+| +-+|.+.++.. ..++...+..+.+|+++|++|+|+. +|+|||+||.|++++.+...||+|||+
T Consensus 102 YiV~elM-etDL~~iik~~------~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 102 YLVFELM-ETDLHQIIKSQ------QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred EEehhHH-hhHHHHHHHcC------ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccc
Confidence 9999999 56999999875 3588999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchh-----hhhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF-----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~-----~~~~~Di~s~g~~~~~~f 914 (914)
|+..... ......+..+.|.+|.|||+. ++.+.||||.||++.||.
T Consensus 172 AR~~~~~------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL 222 (359)
T KOG0660|consen 172 ARYLDKF------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEML 222 (359)
T ss_pred eeecccc------CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHH
Confidence 9987532 112233567899999999999 468999999999999983
No 36
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-34 Score=310.88 Aligned_cols=190 Identities=25% Similarity=0.338 Sum_probs=163.1
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc----CC-cchHHHHHHHHHHHhcC-CCCcceEEeEeecCC
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK----QK-GASKSFVSECEALRNIR-HRNLIKIITICSSTD 775 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 775 (914)
...+.|...+.||+|+||+|+.|++..+++.||+|+++.+ .. ...+.+.+|+.++++++ ||||++++++..
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~--- 90 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA--- 90 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe---
Confidence 3456899999999999999999999999999999977643 12 23456778999999999 999999999954
Q ss_pred CCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC-Cc
Q 042766 776 FEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD-MV 854 (914)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~-~~ 854 (914)
.....++||||+.||+|.+++... .++.+.++.+++.|++.|++|||++ +|+||||||||||++.+ ++
T Consensus 91 --t~~~~~ivmEy~~gGdL~~~i~~~------g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~ 159 (370)
T KOG0583|consen 91 --TPTKIYIVMEYCSGGDLFDYIVNK------GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGN 159 (370)
T ss_pred --cCCeEEEEEEecCCccHHHHHHHc------CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCC
Confidence 444799999999999999999874 4678899999999999999999999 99999999999999999 99
Q ss_pred EEEecccccccccccccccccCCCCccccccCcccccccchhh------hhhcccCccccccccc
Q 042766 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~~~~~~ 913 (914)
+||+|||++..... ........+||+.|+|||++. +.++||||+|+++|.|
T Consensus 160 ~Kl~DFG~s~~~~~--------~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~m 216 (370)
T KOG0583|consen 160 LKLSDFGLSAISPG--------EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVL 216 (370)
T ss_pred EEEeccccccccCC--------CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHH
Confidence 99999999987621 111223578999999999994 4789999999999876
No 37
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=308.28 Aligned_cols=182 Identities=28% Similarity=0.377 Sum_probs=158.2
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc---chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG---ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
-|+..+.||+|+||.||.|++..+.+.||||++...... ...++.+|+..|++++|||+|.+.|+|... ...
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre-----~Ta 101 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLRE-----HTA 101 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeecc-----chH
Confidence 466678899999999999999999999999999754332 335889999999999999999999986543 367
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
|+||||| -|+-.|++.-++ +++.+.++..|+.+.++||+|||+. +.||||||+.|||+++.|.||++|||.
T Consensus 102 WLVMEYC-lGSAsDlleVhk-----KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGS 172 (948)
T KOG0577|consen 102 WLVMEYC-LGSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGS 172 (948)
T ss_pred HHHHHHH-hccHHHHHHHHh-----ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccc
Confidence 9999999 568888887654 5788889999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchh-------hhhhcccCccccccccc
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF-------FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~-------~~~~~Di~s~g~~~~~~ 913 (914)
|..... ...++|||+|||||++ |+.++||||+|+||+|+
T Consensus 173 Asi~~P------------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIEL 218 (948)
T KOG0577|consen 173 ASIMAP------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 218 (948)
T ss_pred hhhcCc------------hhcccCCccccchhHheeccccccCCccceeeccchhhhh
Confidence 976532 1247999999999999 56999999999999985
No 38
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-34 Score=294.01 Aligned_cols=186 Identities=24% Similarity=0.349 Sum_probs=167.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
-+|++.+.+|+|+||+|-+|+.+..|+.||||.+++. ++++.-.+.+|+++|+.++||||+++|++ |+..+.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEV-----FENkdK 127 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEV-----FENKDK 127 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhh-----hcCCce
Confidence 3788889999999999999999999999999999744 44555678999999999999999999998 788889
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
..|||||..+|.|++|+.+. ..+++.++.++++||..|+.|+|.+ +++|||||.+|||+|.++++||+|||
T Consensus 128 IvivMEYaS~GeLYDYiSer------~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYISER------GSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred EEEEEEecCCccHHHHHHHh------ccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccc
Confidence 99999999999999999876 4799999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCccccccccc
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~ 913 (914)
++-.+.+.. .-..+||+|-|.+||++. |..+|-||+|+.+|.+
T Consensus 199 LSNly~~~k---------fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtL 246 (668)
T KOG0611|consen 199 LSNLYADKK---------FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTL 246 (668)
T ss_pred hhhhhcccc---------HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHH
Confidence 998776432 233689999999999984 5889999999988753
No 39
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-34 Score=306.83 Aligned_cols=194 Identities=28% Similarity=0.478 Sum_probs=164.9
Q ss_pred HHHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhcCCCCcceEEeEeecC
Q 042766 697 YAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRHRNLIKIITICSST 774 (914)
Q Consensus 697 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 774 (914)
.+++....+++.+.+.||+|.||+||||+|.++ ||||++..... ...+.|.+|+.++++-+|.||+-+.|||...
T Consensus 384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred ccccccCHHHhhccceeccccccceeecccccc---eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 355556667788889999999999999999754 99999986653 3457999999999999999999999998655
Q ss_pred CCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc
Q 042766 775 DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV 854 (914)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~ 854 (914)
. ..||+.+|+|.+|+.+++..+ ..++..+.++||.|||+|+.|||.+ +|||||||..||++.++++
T Consensus 461 ~------~AIiTqwCeGsSLY~hlHv~e-----tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~k 526 (678)
T KOG0193|consen 461 P------LAIITQWCEGSSLYTHLHVQE-----TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLK 526 (678)
T ss_pred c------eeeeehhccCchhhhhccchh-----hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCc
Confidence 4 389999999999999998764 5789999999999999999999999 9999999999999999999
Q ss_pred EEEecccccccccccccccccCCCCccccccCcccccccchhh-------hhhcccCccccccccc
Q 042766 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~ 913 (914)
|||+|||+|..-.-.... ..-....|..-|||||+++ +.++|||||||+.|||
T Consensus 527 VkIgDFGLatvk~~w~g~------~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YEL 586 (678)
T KOG0193|consen 527 VKIGDFGLATVKTRWSGE------QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYEL 586 (678)
T ss_pred EEEecccceeeeeeeccc------cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHH
Confidence 999999999764332111 1112345888999999994 6999999999999997
No 40
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-33 Score=302.82 Aligned_cols=189 Identities=25% Similarity=0.412 Sum_probs=166.4
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce-
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF- 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~- 781 (914)
++|...+++|+|+||.++.++++.+++.||+|.+.... ....+...+|+.++++++|||||.+.+.+ ...+.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~-----~~~~~~ 78 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSF-----EEDGQL 78 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccch-----hcCCce
Confidence 57888999999999999999999999999999998654 33445789999999999999999999884 33334
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.+|||+||+||++.+.+++.++ ..+++.+..+++.|++.|+.|||++ +|+|||||+.||+++.++.|||+|||
T Consensus 79 l~Ivm~Y~eGg~l~~~i~~~k~----~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfG 151 (426)
T KOG0589|consen 79 LCIVMEYCEGGDLAQLIKEQKG----VLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFG 151 (426)
T ss_pred EEEEEeecCCCCHHHHHHHHhh----ccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchh
Confidence 9999999999999999987653 5789999999999999999999988 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchh----hhhhcccCccccccccc
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~ 913 (914)
+|+.+.... ......+|||.||.||++ ++.++||||+||.+|||
T Consensus 152 laK~l~~~~--------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm 199 (426)
T KOG0589|consen 152 LAKILNPED--------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEM 199 (426)
T ss_pred hhhhcCCch--------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHH
Confidence 999876533 122346899999999999 57999999999999997
No 41
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-33 Score=307.40 Aligned_cols=189 Identities=23% Similarity=0.336 Sum_probs=165.2
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCC
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFE 777 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 777 (914)
...++|...++||+|.||+|+.|..+.+++.+|||++++.. ..+.+..+.|.+|++.. +||.++.++.. |+
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~-----fQ 439 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC-----FQ 439 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc-----cc
Confidence 34568999999999999999999999999999999998653 45677888999988877 49999999987 77
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEE
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHV 857 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki 857 (914)
+.++.++||||+.||++..+.+. ..+++..+..|+..|+.||+|||++ +|||||||.+|||+|.+|++||
T Consensus 440 T~~~l~fvmey~~Ggdm~~~~~~-------~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~ki 509 (694)
T KOG0694|consen 440 TKEHLFFVMEYVAGGDLMHHIHT-------DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKI 509 (694)
T ss_pred cCCeEEEEEEecCCCcEEEEEec-------ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEe
Confidence 77899999999999995554442 4799999999999999999999999 9999999999999999999999
Q ss_pred ecccccccccccccccccCCCCccccccCcccccccchh----hhhhcccCccccccccc
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~ 913 (914)
+|||+++.-.. .......+||||.|||||++ |+.++|.|+||+.+|||
T Consensus 510 ADFGlcKe~m~--------~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeM 561 (694)
T KOG0694|consen 510 ADFGLCKEGMG--------QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEM 561 (694)
T ss_pred cccccccccCC--------CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHH
Confidence 99999985321 12234568999999999999 57999999999999998
No 42
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-34 Score=282.71 Aligned_cols=185 Identities=24% Similarity=0.360 Sum_probs=163.6
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALV 785 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 785 (914)
-|.+.+++|+|+||.||+|.++.+|..||||.+..+ .+.+++.+|+.++++++.|++|++||.|.... ..|+|
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~s-----DLWIV 106 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHS-----DLWIV 106 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCC-----ceEee
Confidence 477888999999999999999999999999998644 45678899999999999999999999864333 68999
Q ss_pred EecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 786 FEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 786 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
||||..|+..++++.++ +++++.+...+.+..++||+|||.. .-||||||+.|||+..+|.+|++|||.|..
T Consensus 107 MEYCGAGSiSDI~R~R~-----K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQ 178 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARR-----KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQ 178 (502)
T ss_pred hhhcCCCcHHHHHHHhc-----CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccch
Confidence 99999999999998654 6899999999999999999999998 889999999999999999999999999987
Q ss_pred ccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 866 LSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
+.+.. .......|||.|||||++. ...+||||+|+|.+||
T Consensus 179 LTDTM--------AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEM 222 (502)
T KOG0574|consen 179 LTDTM--------AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEM 222 (502)
T ss_pred hhhhH--------HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhh
Confidence 65432 2233578999999999994 6999999999999998
No 43
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=6.9e-34 Score=295.84 Aligned_cols=187 Identities=27% Similarity=0.385 Sum_probs=162.4
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
..|+..+.||+|.||.||+|.+..+++.||+|+++.+. ....+++.+|+.++.+++++||.++|+.+... ...|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g-----~~Lw 87 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKG-----TKLW 87 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeec-----ccHH
Confidence 45777799999999999999999999999999998664 44567899999999999999999999986543 3789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
++||||.||++.+.++... .+.+.+..-|++++..|+.|+|.+ +.+|||||+.||++..+|.||++|||.+
T Consensus 88 iiMey~~gGsv~~lL~~~~------~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa 158 (467)
T KOG0201|consen 88 IIMEYCGGGSVLDLLKSGN------ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVA 158 (467)
T ss_pred HHHHHhcCcchhhhhccCC------CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEeccee
Confidence 9999999999999997643 346667777899999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchh----hhhhcccCccccccccc
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~ 913 (914)
..+.... .....++|||.|||||++ |+.++||||+|+|.|||
T Consensus 159 ~ql~~~~--------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEl 204 (467)
T KOG0201|consen 159 GQLTNTV--------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIEL 204 (467)
T ss_pred eeeechh--------hccccccccccccchhhhccccccchhhhhhhhHHHHHH
Confidence 7664322 222468999999999999 46999999999999987
No 44
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=6.5e-33 Score=290.40 Aligned_cols=191 Identities=29% Similarity=0.400 Sum_probs=156.9
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHh--cCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRN--IRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
...+..+.||+|.||.||+|+.. ++.||||++... ..+.|..|-++.+. ++|+||++++++-...+-. ....
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~-~~ey 283 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD-RMEY 283 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc--CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCcc-ccce
Confidence 34556689999999999999985 588999999643 33567777777654 6899999999875443322 3467
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhC------CCCCcEecCCCCCCeeecCCCcEE
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH------CQPPMVHGDLKPSNVLLDYDMVAH 856 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~------~~~~ivHrDlkp~NILl~~~~~~k 856 (914)
++|+||.+.|+|.+|++.+ ..+|....+|+.-+++||+|||+. .+|+|+|||||++|||+..|+++.
T Consensus 284 wLVt~fh~kGsL~dyL~~n-------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTcc 356 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKAN-------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCC 356 (534)
T ss_pred eEEeeeccCCcHHHHHHhc-------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEE
Confidence 9999999999999999875 689999999999999999999986 368999999999999999999999
Q ss_pred EecccccccccccccccccCCCCccccccCcccccccchhhh----------hhcccCcccccccccC
Q 042766 857 VGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM----------LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 857 i~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~----------~~~Di~s~g~~~~~~f 914 (914)
|+|||+|..+... .+.....+.+||.+|||||++.| .+.|+||+|.++-||+
T Consensus 357 IaDFGLAl~~~p~------~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~ 418 (534)
T KOG3653|consen 357 IADFGLALRLEPG------KPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIA 418 (534)
T ss_pred eeccceeEEecCC------CCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999877532 12223345789999999999953 7899999998877763
No 45
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.98 E-value=1.8e-32 Score=307.09 Aligned_cols=196 Identities=22% Similarity=0.306 Sum_probs=161.9
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|++.+.||+|+||+||+|++..+++.||||+++... ......+.+|+++++.++||||+++++++. ....
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~-----~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQ-----DENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE-----cCCe
Confidence 36889999999999999999999999999999997432 233456788999999999999999999854 3458
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKK------DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred EEEEECCCCCcHHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecc
Confidence 99999999999999998754 3588999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccC------------------------------CCCccccccCcccccccchhh----hhhcccCccc
Q 042766 862 LAKFLSNHHLDIASK------------------------------TPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFS 907 (914)
Q Consensus 862 la~~~~~~~~~~~~~------------------------------~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g 907 (914)
+++.+.......... ........+||+.|||||++. +.++|+||+|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 226 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLG 226 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecch
Confidence 997653221100000 000111347999999999984 5789999999
Q ss_pred ccccccC
Q 042766 908 CTNVHHF 914 (914)
Q Consensus 908 ~~~~~~f 914 (914)
|++|||+
T Consensus 227 ~il~el~ 233 (364)
T cd05599 227 VIMYEML 233 (364)
T ss_pred hHHHHhh
Confidence 9999985
No 46
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.98 E-value=1.9e-32 Score=306.37 Aligned_cols=196 Identities=23% Similarity=0.295 Sum_probs=162.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|+..+.||+|+||+||+|++..+++.||+|+++... ......+.+|++++++++||+|+++++.+. ....
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~-----~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQ-----DKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEe-----cCCe
Confidence 36889999999999999999999999999999997432 233457788999999999999999998854 4457
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++.+. ..+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKK------DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeecc
Confidence 89999999999999999764 3688999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccc---------------------------cCCCCccccccCcccccccchhh----hhhcccCcccccc
Q 042766 862 LAKFLSNHHLDIA---------------------------SKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTN 910 (914)
Q Consensus 862 la~~~~~~~~~~~---------------------------~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~ 910 (914)
+|+.+........ ..........+||+.|||||++. +.++|+||+||++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil 226 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHH
Confidence 9986532110000 00000112457999999999984 5789999999999
Q ss_pred cccC
Q 042766 911 VHHF 914 (914)
Q Consensus 911 ~~~f 914 (914)
|||+
T Consensus 227 ~ell 230 (363)
T cd05628 227 YEML 230 (363)
T ss_pred HHHH
Confidence 9984
No 47
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.98 E-value=3.8e-33 Score=268.96 Aligned_cols=207 Identities=22% Similarity=0.254 Sum_probs=173.2
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|.+.+.+|+|||+.||.++...+++.||+|++.....++.+..++|++..++++|||++++++++....-++....|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 46899999999999999999999889999999999877777788999999999999999999999987765555667799
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
++++|...|+|.+.+...+. +...+++.+.++|+.+|++|+++||+. .|+++||||||.||++.+++.+++.|||.+
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~--kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKI--KGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEeehhccccHHHHHHHHhh--cCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCc
Confidence 99999999999999976542 345799999999999999999999998 557999999999999999999999999988
Q ss_pred ccccccccc-cccCCCCccccccCcccccccchh-------hhhhcccCccccccccc
Q 042766 864 KFLSNHHLD-IASKTPSSSIGIKGTVGYVAPGKF-------FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 864 ~~~~~~~~~-~~~~~~~~~~~~~GT~~y~APE~~-------~~~~~Di~s~g~~~~~~ 913 (914)
+...-.... .....-+.+.....|..|+|||.| -+.++||||+|||+|+|
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~ 234 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAM 234 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHH
Confidence 754321100 000011123344578899999999 36999999999999986
No 48
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.97 E-value=4.3e-32 Score=305.24 Aligned_cols=196 Identities=22% Similarity=0.296 Sum_probs=160.4
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++. ...+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-----~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQ-----DAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEE-----cCCe
Confidence 36888999999999999999999999999999986432 233457889999999999999999999854 4458
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~------~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfG 146 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKY------DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFG 146 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecc
Confidence 99999999999999999754 3578888999999999999999999 99999999999999999999999999
Q ss_pred cccccccccccc---------ccCC------------------------------CCccccccCcccccccchhh----h
Q 042766 862 LAKFLSNHHLDI---------ASKT------------------------------PSSSIGIKGTVGYVAPGKFF----M 898 (914)
Q Consensus 862 la~~~~~~~~~~---------~~~~------------------------------~~~~~~~~GT~~y~APE~~~----~ 898 (914)
+|+.+....... .... .......+||+.|||||++. +
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 226 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG 226 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC
Confidence 997432211000 0000 00001257999999999984 5
Q ss_pred hhcccCcccccccccC
Q 042766 899 LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 899 ~~~Di~s~g~~~~~~f 914 (914)
.++|+||+||++|||+
T Consensus 227 ~~~DiwSlGvil~ell 242 (377)
T cd05629 227 QECDWWSLGAIMFECL 242 (377)
T ss_pred CceeeEecchhhhhhh
Confidence 8899999999999985
No 49
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.97 E-value=3.5e-32 Score=306.16 Aligned_cols=195 Identities=21% Similarity=0.288 Sum_probs=160.5
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.|+..+.||+|+||+||+|++..+++.||+|+++... ....+.+.+|++++++++||||+++++++. ..+..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~-----~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQ-----DKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEe-----cCCEE
Confidence 6888999999999999999999999999999997542 234467889999999999999999999854 34589
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++++||+|||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~------~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRM------EVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred EEEEecCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 9999999999999999764 3578888999999999999999998 999999999999999999999999999
Q ss_pred cccccccccccc---------------------------------------cCCCCccccccCcccccccchhh----hh
Q 042766 863 AKFLSNHHLDIA---------------------------------------SKTPSSSIGIKGTVGYVAPGKFF----ML 899 (914)
Q Consensus 863 a~~~~~~~~~~~---------------------------------------~~~~~~~~~~~GT~~y~APE~~~----~~ 899 (914)
++.+........ ..........+||+.|||||++. +.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ 227 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC
Confidence 865421100000 00000012357999999999984 57
Q ss_pred hcccCcccccccccC
Q 042766 900 YTHIPSFSCTNVHHF 914 (914)
Q Consensus 900 ~~Di~s~g~~~~~~f 914 (914)
++||||+||++|||+
T Consensus 228 ~~DiwSlG~il~ell 242 (381)
T cd05626 228 LCDWWSVGVILFEML 242 (381)
T ss_pred ccceeehhhHHHHHH
Confidence 899999999999974
No 50
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=3.2e-33 Score=268.38 Aligned_cols=190 Identities=22% Similarity=0.348 Sum_probs=166.2
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
.+.++|++.+.||+|.||.||.|+.+.++-.||+|++.+.. .+..+++.+|+++-+.++||||+++|+|+. +
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fh-----d 93 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFH-----D 93 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhee-----c
Confidence 34578999999999999999999999999999999996442 345578999999999999999999999954 4
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
....|+++||.++|++...+...+. ..+++.....+..|+|.|+.|+|.. +||||||||+|+|++.++..||+
T Consensus 94 ~~riyLilEya~~gel~k~L~~~~~----~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiA 166 (281)
T KOG0580|consen 94 SKRIYLILEYAPRGELYKDLQEGRM----KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIA 166 (281)
T ss_pred cceeEEEEEecCCchHHHHHHhccc----ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeecc
Confidence 4589999999999999999985443 5688889999999999999999998 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
|||.+-.-. .......|||..|.|||+.. +..+|+|++|+.+||+
T Consensus 167 dfGwsV~~p----------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yef 215 (281)
T KOG0580|consen 167 DFGWSVHAP----------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEF 215 (281)
T ss_pred CCCceeecC----------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHH
Confidence 999886421 22344689999999999996 4899999999999986
No 51
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.97 E-value=7.7e-32 Score=296.46 Aligned_cols=182 Identities=25% Similarity=0.273 Sum_probs=155.3
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEe
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFE 787 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 787 (914)
+.||+|+||.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++. ..+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQ-----THDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEE-----cCCEEEEEEe
Confidence 46999999999999999999999999997432 233456788999999999999999998854 3458899999
Q ss_pred cccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccc
Q 042766 788 YMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867 (914)
Q Consensus 788 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~ 867 (914)
|+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+...
T Consensus 76 ~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 76 YANGGELFFHLSRE------RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred CCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccc
Confidence 99999999998754 3678999999999999999999999 99999999999999999999999999997532
Q ss_pred ccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 868 NHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 147 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 189 (323)
T cd05571 147 SDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 189 (323)
T ss_pred cCC--------CcccceecCccccChhhhcCCCCCccccCcccchhhhhhh
Confidence 111 1122457999999999984 57899999999999985
No 52
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-32 Score=295.38 Aligned_cols=181 Identities=28% Similarity=0.442 Sum_probs=159.0
Q ss_pred cccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecccC
Q 042766 712 MIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMEN 791 (914)
Q Consensus 712 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~ 791 (914)
++|+|+||+||.|++.++...+|||.+..++....+-+.+||...++++|.|||+++|.|.. .++.-|.||-+||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se-----nGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSE-----NGFFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCC-----CCeEEEEeecCCC
Confidence 79999999999999999999999999987777777889999999999999999999998543 3478899999999
Q ss_pred CCHHHHHhccCCcccccCC--CHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec-CCCcEEEecccccccccc
Q 042766 792 GSLEDWLHQSNDQVEVRKL--SLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD-YDMVAHVGDFGLAKFLSN 868 (914)
Q Consensus 792 gsL~~~l~~~~~~~~~~~~--~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~-~~~~~ki~DFGla~~~~~ 868 (914)
|+|.+.++..= .++ .+...-.+.+||++||.|||++ .|||||||-+||||. ..|.+||+|||.++.+..
T Consensus 657 GSLSsLLrskW-----GPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg 728 (1226)
T KOG4279|consen 657 GSLSSLLRSKW-----GPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG 728 (1226)
T ss_pred CcHHHHHHhcc-----CCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc
Confidence 99999997542 334 6777888999999999999999 999999999999996 679999999999987643
Q ss_pred cccccccCCCCccccccCcccccccchh------hhhhcccCccccccccc
Q 042766 869 HHLDIASKTPSSSIGIKGTVGYVAPGKF------FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 869 ~~~~~~~~~~~~~~~~~GT~~y~APE~~------~~~~~Di~s~g~~~~~~ 913 (914)
- ..+...+.||..|||||++ +|.++||||||||.+||
T Consensus 729 i--------nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEM 771 (1226)
T KOG4279|consen 729 I--------NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEM 771 (1226)
T ss_pred C--------CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEee
Confidence 1 1233457899999999999 67999999999999998
No 53
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.97 E-value=4.5e-32 Score=302.99 Aligned_cols=191 Identities=19% Similarity=0.264 Sum_probs=161.9
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
...++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+.+++.++||||+++++++. .
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-----~ 114 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ-----D 114 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE-----c
Confidence 3456899999999999999999999999999999998642 2233456889999999999999999999854 4
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
....++||||+++|+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~l~~~-------~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~ 184 (370)
T cd05621 115 DKYLYMVMEYMPGGDLVNLMSNY-------DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLA 184 (370)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEE
Confidence 45899999999999999998643 478888999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh--------hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF--------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~--------~~~~Di~s~g~~~~~~f 914 (914)
|||+|+....... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 185 DFG~a~~~~~~~~-------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell 241 (370)
T cd05621 185 DFGTCMKMDETGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEML 241 (370)
T ss_pred ecccceecccCCc-------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHH
Confidence 9999986532211 1112457999999999984 36899999999999974
No 54
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.97 E-value=9.9e-32 Score=302.36 Aligned_cols=196 Identities=21% Similarity=0.266 Sum_probs=160.2
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++.+. ..+.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~-----~~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQ-----DKDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEE-----cCCE
Confidence 36899999999999999999999999999999986432 233467889999999999999999998854 4458
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~------~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRL------GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 99999999999999999764 3578888899999999999999999 99999999999999999999999999
Q ss_pred cccccccccccc-----------------------------------ccCCCCccccccCcccccccchhh----hhhcc
Q 042766 862 LAKFLSNHHLDI-----------------------------------ASKTPSSSIGIKGTVGYVAPGKFF----MLYTH 902 (914)
Q Consensus 862 la~~~~~~~~~~-----------------------------------~~~~~~~~~~~~GT~~y~APE~~~----~~~~D 902 (914)
+|+.+....... ...........+||+.|||||++. +.++|
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 226 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 226 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCccee
Confidence 986432100000 000000112457999999999984 57899
Q ss_pred cCcccccccccC
Q 042766 903 IPSFSCTNVHHF 914 (914)
Q Consensus 903 i~s~g~~~~~~f 914 (914)
|||+||++|||.
T Consensus 227 iwSlGvilyell 238 (376)
T cd05598 227 WWSVGVILYEML 238 (376)
T ss_pred eeeccceeeehh
Confidence 999999999983
No 55
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.97 E-value=5.3e-32 Score=298.40 Aligned_cols=186 Identities=22% Similarity=0.303 Sum_probs=161.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|++++++++||||+++++++. ..+
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~ 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQ-----DEN 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-----cCC
Confidence 357999999999999999999999999999999997432 234467889999999999999999999854 345
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Df 162 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRKA------GRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDF 162 (329)
T ss_pred EEEEEEcCCCCChHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeec
Confidence 789999999999999999764 3578888899999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++..... .....||+.|||||++. +.++|+||+||++|||+
T Consensus 163 g~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 209 (329)
T PTZ00263 163 GFAKKVPDR-----------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFI 209 (329)
T ss_pred cCceEcCCC-----------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHH
Confidence 999865321 11357999999999984 57899999999999874
No 56
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.97 E-value=5.8e-32 Score=304.77 Aligned_cols=195 Identities=20% Similarity=0.270 Sum_probs=159.9
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++.+. ..+..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~-----~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQ-----DKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEE-----eCCEE
Confidence 5888999999999999999999999999999996432 233457889999999999999999999854 34589
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++|+|.+++.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~------~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRM------GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred EEEEeCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCC
Confidence 9999999999999998754 3578888999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccc---------------------------------------ccCCCCccccccCcccccccchhh----hh
Q 042766 863 AKFLSNHHLDI---------------------------------------ASKTPSSSIGIKGTVGYVAPGKFF----ML 899 (914)
Q Consensus 863 a~~~~~~~~~~---------------------------------------~~~~~~~~~~~~GT~~y~APE~~~----~~ 899 (914)
|+.+....... ...........+||+.|||||++. +.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 227 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCC
Confidence 86432100000 000000112357999999999984 58
Q ss_pred hcccCcccccccccC
Q 042766 900 YTHIPSFSCTNVHHF 914 (914)
Q Consensus 900 ~~Di~s~g~~~~~~f 914 (914)
++|+||+||++|||+
T Consensus 228 ~~DiwSlGvil~ell 242 (382)
T cd05625 228 LCDWWSVGVILYEML 242 (382)
T ss_pred eeeEEechHHHHHHH
Confidence 899999999999984
No 57
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.97 E-value=3.4e-32 Score=294.78 Aligned_cols=185 Identities=25% Similarity=0.356 Sum_probs=160.1
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++ .....
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTE-----HDQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhh-----ccCCe
Confidence 36888999999999999999999899999999996432 23345788999999999999999999874 44458
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg 146 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNS------GRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFG 146 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecC
Confidence 89999999999999999764 3578889999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++..... .....||+.|+|||++. +.++||||+||++|+|+
T Consensus 147 ~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~ 192 (291)
T cd05612 147 FAKKLRDR-----------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEML 192 (291)
T ss_pred cchhccCC-----------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHH
Confidence 99865321 11346999999999985 57899999999999874
No 58
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-33 Score=299.38 Aligned_cols=187 Identities=24% Similarity=0.374 Sum_probs=165.0
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALV 785 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 785 (914)
.|.++..||.|+||+||+|+.+.++...|.|++..+.....+++.-||+||+.++||+||++++.|+. .+..||.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~-----enkLwil 107 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYF-----ENKLWIL 107 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhc-----cCceEEE
Confidence 46677789999999999999999998899999988888888999999999999999999999987542 2468999
Q ss_pred EecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 786 FEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 786 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
.|||.||-.+.++-.-+ +.+++.++..+++|++.||.|||++ .|||||||+.|||++-+|.++++|||.+..
T Consensus 108 iEFC~GGAVDaimlEL~-----r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAK 179 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLELG-----RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAK 179 (1187)
T ss_pred EeecCCchHhHHHHHhc-----cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeeccccccc
Confidence 99999999999887654 5789999999999999999999999 999999999999999999999999998754
Q ss_pred ccccccccccCCCCccccccCcccccccchh---------hhhhcccCccccccccc
Q 042766 866 LSNHHLDIASKTPSSSIGIKGTVGYVAPGKF---------FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~---------~~~~~Di~s~g~~~~~~ 913 (914)
... +......+.|||+|||||+. |++++||||||+|++||
T Consensus 180 n~~--------t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEM 228 (1187)
T KOG0579|consen 180 NKS--------TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEM 228 (1187)
T ss_pred chh--------HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHH
Confidence 321 12234468999999999998 57999999999999998
No 59
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.97 E-value=1e-31 Score=296.64 Aligned_cols=186 Identities=23% Similarity=0.335 Sum_probs=159.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCCc-EEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDE-MVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.++|++.+.||+|+||.||+|++..++ ..||+|++... .....+.+.+|+++++.++||||+++++++.. .
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-----~ 103 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD-----E 103 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe-----C
Confidence 357999999999999999999976554 78999998643 23345678899999999999999999998543 4
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 104 ~~~~lv~Ey~~~g~L~~~i~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~D 174 (340)
T PTZ00426 104 SYLYLVLEFVIGGEFFTFLRRN------KRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTD 174 (340)
T ss_pred CEEEEEEeCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEec
Confidence 5789999999999999999764 3588899999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++..... .....||+.|||||++. +.++|+||+||++|||+
T Consensus 175 FG~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 222 (340)
T PTZ00426 175 FGFAKVVDTR-----------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEIL 222 (340)
T ss_pred CCCCeecCCC-----------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHh
Confidence 9999865321 12357999999999984 57899999999999984
No 60
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.97 E-value=1.2e-31 Score=296.43 Aligned_cols=185 Identities=23% Similarity=0.354 Sum_probs=160.9
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+++++.++||||+++++++. ..+.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~-----~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ-----DDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE-----cCCE
Confidence 36889999999999999999999999999999997432 234467889999999999999999998854 3458
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNL------GVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCc
Confidence 89999999999999999754 3578889999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+|+.... ......||+.|+|||++. +.++|+||+||++|||+
T Consensus 147 ~a~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell 192 (333)
T cd05600 147 LSKGIVT-----------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFL 192 (333)
T ss_pred CCccccc-----------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhh
Confidence 9976432 112357999999999984 57899999999999984
No 61
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-32 Score=309.78 Aligned_cols=203 Identities=23% Similarity=0.274 Sum_probs=165.1
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC-CCCcceEEeE-eecCCCCC-CceE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR-HRNLIKIITI-CSSTDFEG-VDFK 782 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~~~~~~-~~~~ 782 (914)
++++.++|.+|||+.||.|++...+..||+|++-..++...+...+||++|++++ |+|||.+++. .....-.+ ..+.
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 5677889999999999999999887999999998778888899999999999997 9999999983 22221222 3467
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
.|.||||+||.|-+++..+.. ..+++.++++|++|+++|+++||.. +|+|||||||.||||++.+|..||||||-
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq----~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQ----TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred EeehhhccCCcHHHHHHHHHh----ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 899999999999999986532 4599999999999999999999987 78899999999999999999999999998
Q ss_pred cccccccc-cccccCCCCccccccCcccccccchhh-------hhhcccCccccccccc
Q 042766 863 AKFLSNHH-LDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 863 a~~~~~~~-~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~ 913 (914)
|....... .......-........|+-|+|||++- ++++|||++||.+|.+
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkL 251 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKL 251 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHH
Confidence 86432211 000001111233456899999999982 6999999999999853
No 62
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97 E-value=2e-31 Score=297.88 Aligned_cols=196 Identities=23% Similarity=0.300 Sum_probs=162.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|+..+.||+|+||.||+|++..+++.||+|+++... ......+.+|+.++.+++||+|+++++.+ +....
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-----~~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSF-----QDKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 36888999999999999999999999999999997432 33446788899999999999999999884 34458
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++.+. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~------~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKK------DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred EEEEEeCCCCccHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeecc
Confidence 89999999999999999764 3588899999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccc---------------------------cCCCCccccccCcccccccchhh----hhhcccCcccccc
Q 042766 862 LAKFLSNHHLDIA---------------------------SKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTN 910 (914)
Q Consensus 862 la~~~~~~~~~~~---------------------------~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~ 910 (914)
+++.+........ ..........+||+.|||||++. +.++|+||+||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 226 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccccee
Confidence 9975532110000 00001112457999999999984 5789999999999
Q ss_pred cccC
Q 042766 911 VHHF 914 (914)
Q Consensus 911 ~~~f 914 (914)
|||+
T Consensus 227 yel~ 230 (360)
T cd05627 227 YEML 230 (360)
T ss_pred eecc
Confidence 9985
No 63
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.97 E-value=1.1e-31 Score=300.32 Aligned_cols=195 Identities=19% Similarity=0.259 Sum_probs=164.1
Q ss_pred HHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecC
Q 042766 698 AELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSST 774 (914)
Q Consensus 698 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 774 (914)
.++....++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+.+++.++||||+++++.+.
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-- 113 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-- 113 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--
Confidence 34445567999999999999999999999999999999998642 2233456789999999999999999998854
Q ss_pred CCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc
Q 042766 775 DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV 854 (914)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~ 854 (914)
.....++||||+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 114 ---~~~~~~lv~Ey~~gg~L~~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ 180 (371)
T cd05622 114 ---DDRYLYMVMEYMPGGDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGH 180 (371)
T ss_pred ---cCCEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCC
Confidence 345899999999999999998643 477888899999999999999999 9999999999999999999
Q ss_pred EEEecccccccccccccccccCCCCccccccCcccccccchhh--------hhhcccCcccccccccC
Q 042766 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF--------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~--------~~~~Di~s~g~~~~~~f 914 (914)
+||+|||+|+....... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 181 ikL~DfG~a~~~~~~~~-------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell 241 (371)
T cd05622 181 LKLADFGTCMKMNKEGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 241 (371)
T ss_pred EEEEeCCceeEcCcCCc-------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHH
Confidence 99999999986543211 1112457999999999984 36899999999999984
No 64
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=5.4e-32 Score=297.32 Aligned_cols=193 Identities=27% Similarity=0.411 Sum_probs=160.8
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeecc-CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCC-CCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIITICSSTD-FEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~~~~ 783 (914)
.|...+.||+||||.||+|+++.+|+.||||.++.. .....++..+|++++++++|||||+++++-.... .-......
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 345567899999999999999999999999999754 3455678899999999999999999998732211 00123568
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec--CCC--cEEEec
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD--YDM--VAHVGD 859 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~--~~~--~~ki~D 859 (914)
+|||||.||||...+.+... ...+++.+.+.+..+++.||.|||++ +||||||||.||++- .+| ..||+|
T Consensus 94 lvmEyC~gGsL~~~L~~PEN---~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtD 167 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPEN---AYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTD 167 (732)
T ss_pred EEEeecCCCcHHHHhcCccc---ccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeec
Confidence 99999999999999987543 46799999999999999999999999 999999999999984 334 589999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCccccccccc
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~ 913 (914)
||.||.+.++. .....+||+.|.|||++. +..+|-||||||+||.
T Consensus 168 fG~Arel~d~s---------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~c 217 (732)
T KOG4250|consen 168 FGAARELDDNS---------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYEC 217 (732)
T ss_pred ccccccCCCCC---------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHH
Confidence 99999876543 234578999999999984 5889999999999974
No 65
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=7.5e-32 Score=292.72 Aligned_cols=187 Identities=22% Similarity=0.321 Sum_probs=163.7
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.+.|+.++.||.|+.|.|..|++..||+.+|||++.... ......+.+|+.+|+-+.||||+++|++ ++...
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydV-----we~~~ 85 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDV-----WENKQ 85 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeee-----eccCc
Confidence 356888999999999999999999999999999997552 2334578899999999999999999999 56666
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
+.|+|.||++||.|.+++-+++ ++++.++.++++||+.|+.|+|+. +|+|||+||+|+|+|..+.+||+||
T Consensus 86 ~lylvlEyv~gGELFdylv~kG------~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADF 156 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVRKG------PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADF 156 (786)
T ss_pred eEEEEEEecCCchhHHHHHhhC------CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeecc
Confidence 9999999999999999998764 688899999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCccccccccc
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~ 913 (914)
|+|..-..+. .-...||+|.|.|||+++ |.++||||-|+++|.+
T Consensus 157 GMAsLe~~gk---------lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfAL 205 (786)
T KOG0588|consen 157 GMASLEVPGK---------LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFAL 205 (786)
T ss_pred ceeecccCCc---------cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHH
Confidence 9998643322 223468999999999995 5899999999988753
No 66
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.97 E-value=2.1e-31 Score=287.72 Aligned_cols=187 Identities=23% Similarity=0.331 Sum_probs=158.2
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
|+..+.||+|+||.||+|++..+++.||+|.+.... ......+.+|++++++++|++|+++++++. ..+..+
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~-----~~~~~~ 76 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYE-----TKDALC 76 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEc-----cCCeEE
Confidence 677889999999999999999999999999986432 223346789999999999999999998854 344789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++|+|.+++..... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 77 lv~e~~~~g~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~ 149 (285)
T cd05631 77 LVLTIMNGGDLKFHIYNMGN----PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLA 149 (285)
T ss_pred EEEEecCCCcHHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 99999999999988864321 3688999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+...... ......||+.|||||++. +.++|+||+||++++|+
T Consensus 150 ~~~~~~~---------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~ 195 (285)
T cd05631 150 VQIPEGE---------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMI 195 (285)
T ss_pred EEcCCCC---------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHH
Confidence 8653211 112346999999999984 58899999999999874
No 67
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.97 E-value=1.2e-31 Score=299.88 Aligned_cols=190 Identities=20% Similarity=0.271 Sum_probs=160.6
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
..++|++.+.||+|+||.||+|++..+++.||+|+++.. .....+.+.+|+++++.++||||+++++++. ..
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~-----~~ 115 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ-----DD 115 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe-----cC
Confidence 456899999999999999999999999999999999643 2233456789999999999999999998843 44
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~D 185 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSNY-------DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLAD 185 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEe
Confidence 5899999999999999998643 467888899999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh--------hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF--------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~--------~~~~Di~s~g~~~~~~f 914 (914)
||+++....... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 186 fG~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyell 241 (370)
T cd05596 186 FGTCMKMDANGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 241 (370)
T ss_pred ccceeeccCCCc-------ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHH
Confidence 999986532211 0112357999999999974 46899999999999974
No 68
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.97 E-value=5e-31 Score=290.38 Aligned_cols=182 Identities=25% Similarity=0.277 Sum_probs=154.0
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEe
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFE 787 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 787 (914)
+.||+|+||.||+|++..+++.||+|+++... ......+.+|+++++.++||||+++++++. ..+..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~-----~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ-----THDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEE-----cCCEEEEEEe
Confidence 46899999999999999999999999997432 233456788999999999999999998853 3458899999
Q ss_pred cccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 788 YMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH-HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 788 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~-~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
|+++|+|.+++... ..+++.++..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 ~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 76 YANGGELFFHLSRE------RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 146 (325)
T ss_pred CCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence 99999999988754 368899999999999999999997 6 8999999999999999999999999998753
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.... .......||+.|||||++. +.++|+||+||++|||+
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 190 (325)
T cd05594 147 IKDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 190 (325)
T ss_pred CCCC--------cccccccCCcccCCHHHHccCCCCCccccccccceeeeec
Confidence 2211 1112356999999999984 58899999999999985
No 69
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-31 Score=292.44 Aligned_cols=187 Identities=28% Similarity=0.458 Sum_probs=155.5
Q ss_pred ccccCcccCCccEEEEEEEECCCc----EEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDE----MVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
-...++||+|+||.||+|+.+..+ ..||||..+... .....++.+|+++|++++|||||++||++....
T Consensus 159 v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~---- 234 (474)
T KOG0194|consen 159 IELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE---- 234 (474)
T ss_pred ccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC----
Confidence 344589999999999999986432 238999987422 445678999999999999999999999976544
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
..++|||+|+||+|.+++++.+ ..++..+...++.+.|.||+|||++ ++|||||.++|+|++.++.+||+|
T Consensus 235 -Pl~ivmEl~~gGsL~~~L~k~~-----~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISD 305 (474)
T KOG0194|consen 235 -PLMLVMELCNGGSLDDYLKKNK-----KSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISD 305 (474)
T ss_pred -ccEEEEEecCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCc
Confidence 6899999999999999999865 3689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~f 914 (914)
||+++.-........ ...-...|+|||.+ ++.++||||||++++|.|
T Consensus 306 FGLs~~~~~~~~~~~--------~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif 356 (474)
T KOG0194|consen 306 FGLSRAGSQYVMKKF--------LKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIF 356 (474)
T ss_pred cccccCCcceeeccc--------cccCcceecChhhhccCccccccchhheeeeEEeee
Confidence 999875431111100 01234689999998 579999999999999987
No 70
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97 E-value=2.8e-31 Score=292.98 Aligned_cols=190 Identities=24% Similarity=0.271 Sum_probs=160.8
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|++.+.||+|+||+||+|++..+++.||+|++... .....+.+.+|+.+++.++|+||+++++++. ..+.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQ-----DENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEe-----cCCe
Confidence 3688999999999999999999999999999999642 2334456889999999999999999998854 3458
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++.+.. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg 147 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFE-----DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFG 147 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECC
Confidence 999999999999999997533 3688889999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~~f 914 (914)
+++.+..... .......||+.|||||++. +.++|+||+||++|+|+
T Consensus 148 ~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~ 202 (331)
T cd05597 148 SCLRLLADGT-------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEML 202 (331)
T ss_pred ceeecCCCCC-------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHh
Confidence 9976543211 1112246999999999985 35799999999999984
No 71
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.97 E-value=3e-32 Score=289.02 Aligned_cols=173 Identities=29% Similarity=0.485 Sum_probs=151.3
Q ss_pred ccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEec
Q 042766 709 SSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEY 788 (914)
Q Consensus 709 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~ 788 (914)
..+-+|.|+.|.||+|+.+ ++.||||+++.- -..+|+-|++++||||+.+.|+|.... ..+|||||
T Consensus 128 ELeWlGSGaQGAVF~Grl~--netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsP-----cyCIiMEf 193 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLH--NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSP-----CYCIIMEF 193 (904)
T ss_pred hhhhhccCcccceeeeecc--CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCc-----eeEEeeec
Confidence 3567999999999999996 578999987522 134788899999999999999987654 78999999
Q ss_pred ccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccccc
Q 042766 789 MENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868 (914)
Q Consensus 789 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~ 868 (914)
|+.|.|+++++.. ..++....+.+..+||.|+.|||.+ .|||||||.-||||+.+..|||+|||.++...+
T Consensus 194 Ca~GqL~~VLka~------~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~ 264 (904)
T KOG4721|consen 194 CAQGQLYEVLKAG------RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSD 264 (904)
T ss_pred cccccHHHHHhcc------CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhh
Confidence 9999999999865 4688889999999999999999999 999999999999999999999999999987654
Q ss_pred cccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 869 HHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 869 ~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
. .....++||..|||||++. ..++||||||+++.||
T Consensus 265 ~---------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEm 304 (904)
T KOG4721|consen 265 K---------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEM 304 (904)
T ss_pred h---------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHH
Confidence 2 1233589999999999996 5999999999999887
No 72
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-31 Score=274.84 Aligned_cols=189 Identities=28% Similarity=0.438 Sum_probs=153.7
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHh--cCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRN--IRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.+....+.||+|.||+||+|+|+ |+.||||++... +.+.+.+|.++.+. ++|+||+.+++.-.... ..-...
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~-gs~TQL 284 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDN-GSWTQL 284 (513)
T ss_pred heeEEEEEecCccccceeecccc--CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCC-CceEEE
Confidence 35667789999999999999997 678999999643 33667788888776 59999999987532211 112358
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCcEecCCCCCCeeecCCCcEEE
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH-----CQPPMVHGDLKPSNVLLDYDMVAHV 857 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~-----~~~~ivHrDlkp~NILl~~~~~~ki 857 (914)
|+|.||.|.|+|+||+.+. .++....++++.-+|.||++||.. .+|.|.|||||+.|||+..++...|
T Consensus 285 wLvTdYHe~GSL~DyL~r~-------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~I 357 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNRN-------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 357 (513)
T ss_pred EEeeecccCCcHHHHHhhc-------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEE
Confidence 9999999999999999863 688899999999999999999975 4799999999999999999999999
Q ss_pred ecccccccccccc--cccccCCCCccccccCcccccccchhh----------hhhcccCcccccccc
Q 042766 858 GDFGLAKFLSNHH--LDIASKTPSSSIGIKGTVGYVAPGKFF----------MLYTHIPSFSCTNVH 912 (914)
Q Consensus 858 ~DFGla~~~~~~~--~~~~~~~~~~~~~~~GT~~y~APE~~~----------~~~~Di~s~g~~~~~ 912 (914)
+|+|+|-...... .+.+ ....+||.+|||||++- -..+||||||.++-|
T Consensus 358 ADLGLAv~h~~~t~~idi~------~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWE 418 (513)
T KOG2052|consen 358 ADLGLAVRHDSDTDTIDIP------PNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWE 418 (513)
T ss_pred eeceeeEEecccCCcccCC------CCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHH
Confidence 9999997665432 2222 23468999999999982 288999999987655
No 73
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.6e-31 Score=276.04 Aligned_cols=199 Identities=27% Similarity=0.293 Sum_probs=169.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|+..+.||+|.-|+||.|+.++++..+|+|++++.. +....+...|-+||+.++||.++.+|+. |+...
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~-----fet~~ 150 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYAS-----FETDK 150 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhe-----eeccc
Confidence 457888899999999999999999999999999997543 4445678889999999999999999998 66677
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
+.++|||||+||+|....++... ..+++..+..++.+|+-||+|||-. |||.||||||||||.++|++.++||
T Consensus 151 ~~cl~meyCpGGdL~~LrqkQp~----~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDF 223 (459)
T KOG0610|consen 151 YSCLVMEYCPGGDLHSLRQKQPG----KRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDF 223 (459)
T ss_pred eeEEEEecCCCccHHHHHhhCCC----CccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeec
Confidence 99999999999999999887654 6899999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccc-------------------------------ccc-----------------ccCCCCccccccCcccccc
Q 042766 861 GLAKFLSNHH-------------------------------LDI-----------------ASKTPSSSIGIKGTVGYVA 892 (914)
Q Consensus 861 Gla~~~~~~~-------------------------------~~~-----------------~~~~~~~~~~~~GT~~y~A 892 (914)
.++....... ... +.....++..++||-.|.|
T Consensus 224 DLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlA 303 (459)
T KOG0610|consen 224 DLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLA 303 (459)
T ss_pred cccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccc
Confidence 9875432100 000 0112233557899999999
Q ss_pred cchhhh----hhcccCcccccccccC
Q 042766 893 PGKFFM----LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 893 PE~~~~----~~~Di~s~g~~~~~~f 914 (914)
||++.| -++|.|+||+.+|||.
T Consensus 304 PEvI~G~GHgsAVDWWtfGIflYEmL 329 (459)
T KOG0610|consen 304 PEVIRGEGHGSAVDWWTFGIFLYEML 329 (459)
T ss_pred ceeeecCCCCchhhHHHHHHHHHHHH
Confidence 999974 8999999999999984
No 74
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.97 E-value=1.7e-31 Score=293.20 Aligned_cols=185 Identities=26% Similarity=0.353 Sum_probs=159.1
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC-C-----CCcceEEeEeecCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR-H-----RNLIKIITICSSTDFEG 778 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~~ 778 (914)
.+|.+.+.||+|+||.|.+|.+..|++.||||+++.+ .....+...|+.+|..++ | -|+|++++++ ..
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F-----~f 259 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF-----YF 259 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc-----cc
Confidence 3899999999999999999999999999999999633 334567788999999996 3 4799999994 44
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC--CcEE
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD--MVAH 856 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~--~~~k 856 (914)
.++.|||+|.+ ..+|+++++..+- ..++...+..|+.||+.||.+||+. +|||+||||||||+..- ..+|
T Consensus 260 r~HlciVfELL-~~NLYellK~n~f----~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vK 331 (586)
T KOG0667|consen 260 RNHLCIVFELL-STNLYELLKNNKF----RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIK 331 (586)
T ss_pred ccceeeeehhh-hhhHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCcee
Confidence 45899999999 5699999998754 5799999999999999999999999 99999999999999654 3799
Q ss_pred EecccccccccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccccC
Q 042766 857 VGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 857 i~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~f 914 (914)
|+|||.|+...+... ..+-+..|+|||++ ++.+.|+|||||+++|||
T Consensus 332 VIDFGSSc~~~q~vy-----------tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~ 382 (586)
T KOG0667|consen 332 VIDFGSSCFESQRVY-----------TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELF 382 (586)
T ss_pred EEecccccccCCcce-----------eeeeccccccchhhccCCCCCccceeehhhhHHhHh
Confidence 999999987543221 34677899999999 469999999999999997
No 75
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.97 E-value=4.2e-31 Score=291.03 Aligned_cols=182 Identities=25% Similarity=0.291 Sum_probs=155.1
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEe
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFE 787 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 787 (914)
+.||+|+||.||+|++..+++.||+|++.... ......+.+|+++++.++||||+++++++. ..+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQ-----TKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE-----cCCEEEEEEe
Confidence 46899999999999999999999999997432 234467889999999999999999998853 4458899999
Q ss_pred cccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccc
Q 042766 788 YMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867 (914)
Q Consensus 788 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~ 867 (914)
|+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 76 y~~~g~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 76 YVNGGELFFHLSRE------RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (328)
T ss_pred CCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCC
Confidence 99999999988754 3688999999999999999999999 99999999999999999999999999987532
Q ss_pred ccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 868 NHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
... ......+||+.|||||++. +.++|+||+||++|+|+
T Consensus 147 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell 189 (328)
T cd05593 147 TDA--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 189 (328)
T ss_pred Ccc--------cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHh
Confidence 211 1112357999999999984 58899999999999874
No 76
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=1.3e-31 Score=301.84 Aligned_cols=196 Identities=29% Similarity=0.497 Sum_probs=163.4
Q ss_pred hcccccCcccCCccEEEEEEEEC-----CCcEEEEEEEeeccCCc-chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILG-----DDEMVVAVKVINLKQKG-ASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
++....+.||+|+||+||+|+.. ++...||||.++..... ...+|++|+++++.++|||||+++|+|...+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~--- 562 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGD--- 562 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC---
Confidence 44556789999999999999874 34578999999866554 6789999999999999999999999986554
Q ss_pred CceEeEEEecccCCCHHHHHhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVE--------VRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 850 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~ 850 (914)
..++|+|||..|||.+|+........ ..+++..+.+.||.|||.||+||-++ .+|||||..+|+||.
T Consensus 563 --P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVg 637 (774)
T KOG1026|consen 563 --PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVG 637 (774)
T ss_pred --eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceec
Confidence 78999999999999999985433211 23488999999999999999999999 899999999999999
Q ss_pred CCCcEEEecccccccccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccccC
Q 042766 851 YDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 851 ~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~f 914 (914)
++..|||+|||++|.+-..++..... ...=..+|||||.+ |+..+||||||+++-|.|
T Consensus 638 e~l~VKIsDfGLsRdiYssDYYk~~~------~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIF 699 (774)
T KOG1026|consen 638 ENLVVKISDFGLSRDIYSSDYYKVRG------NTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIF 699 (774)
T ss_pred cceEEEecccccchhhhhhhhhcccC------CceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhh
Confidence 99999999999998765444332221 11235689999999 469999999999999887
No 77
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=3.1e-32 Score=270.01 Aligned_cols=197 Identities=25% Similarity=0.361 Sum_probs=165.2
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCc----EEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDE----MVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDF 776 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 776 (914)
....|+....||+|+||.||+|+.+++. +.+|+|.++.+. .+......+|+..++.++|||++.+..++...
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~-- 99 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH-- 99 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc--
Confidence 3457899999999999999999765443 378999997442 34567889999999999999999998886442
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC----
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---- 852 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~---- 852 (914)
....++++||.+. +|.++|+-++.... +.++...+..|..||+.|+.|||++ =|+||||||.|||+..+
T Consensus 100 --d~~v~l~fdYAEh-DL~~II~fHr~~~~-~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgper 172 (438)
T KOG0666|consen 100 --DKKVWLLFDYAEH-DLWHIIKFHRASKA-KQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPER 172 (438)
T ss_pred --CceEEEEehhhhh-hHHHHHHHhccchh-ccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCcc
Confidence 3578999999986 99999987665443 6899999999999999999999999 79999999999999887
Q ss_pred CcEEEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCccccccccc
Q 042766 853 MVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 853 ~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~ 913 (914)
|.|||+|||+||.+...-. +.......+-|.+|+|||.+. +.+.|+|+.||++.|+
T Consensus 173 G~VKIaDlGlaR~~~~plk-----pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaEl 233 (438)
T KOG0666|consen 173 GRVKIADLGLARLFNNPLK-----PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAEL 233 (438)
T ss_pred CeeEeecccHHHHhhcccc-----ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHH
Confidence 8999999999999875432 222334578899999999994 5999999999999886
No 78
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.97 E-value=3.6e-31 Score=289.75 Aligned_cols=180 Identities=23% Similarity=0.332 Sum_probs=153.9
Q ss_pred ccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecc
Q 042766 713 IGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYM 789 (914)
Q Consensus 713 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 789 (914)
||+|+||.||+|++..+++.||+|+++.. .......+.+|++++++++||||+++++++. ..+..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ-----SPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe-----cCCeEEEEEcCC
Confidence 69999999999999999999999999643 2334467889999999999999999998854 345789999999
Q ss_pred cCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccc
Q 042766 790 ENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869 (914)
Q Consensus 790 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~ 869 (914)
++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 76 ~~g~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 76 NGGELFHHLQRE------GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred CCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 999999999764 3588899999999999999999999 9999999999999999999999999999753221
Q ss_pred ccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 870 HLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 870 ~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
. ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 147 ~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~ 187 (312)
T cd05585 147 D--------DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEML 187 (312)
T ss_pred C--------CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHH
Confidence 1 1122357999999999984 47899999999999874
No 79
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.97 E-value=2.9e-31 Score=291.78 Aligned_cols=182 Identities=25% Similarity=0.289 Sum_probs=154.4
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEe
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFE 787 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 787 (914)
+.||+|+||.||+|++..+++.||+|+++.. .......+.+|++++++++||||+++++++. ..+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~-----~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ-----THDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEe-----cCCEEEEEEe
Confidence 4689999999999999999999999999743 2233456788999999999999999998854 3457899999
Q ss_pred cccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccc
Q 042766 788 YMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867 (914)
Q Consensus 788 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~ 867 (914)
|+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 76 YANGGELFFHLSRE------RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred CCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhcccc
Confidence 99999999988754 3688999999999999999999999 99999999999999999999999999987532
Q ss_pred ccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 868 NHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
... .......||+.|||||++. +.++|+||+||++|||+
T Consensus 147 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 189 (323)
T cd05595 147 SDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 189 (323)
T ss_pred CCC--------CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHH
Confidence 211 1112357999999999984 58899999999999874
No 80
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.97 E-value=5.2e-31 Score=291.14 Aligned_cols=190 Identities=23% Similarity=0.258 Sum_probs=161.9
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++. ....
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~-----~~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQ-----DKDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEe-----cCCe
Confidence 36888999999999999999999999999999997432 234467889999999999999999998853 3457
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++.+.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg 147 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYE-----DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFG 147 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCC
Confidence 899999999999999997653 3688999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----------hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----------~~~~Di~s~g~~~~~~f 914 (914)
+|+.+...... ......||+.|+|||++. +.++||||+||++|||+
T Consensus 148 ~a~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~ 203 (330)
T cd05601 148 SAARLTANKMV-------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMI 203 (330)
T ss_pred CCeECCCCCce-------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeec
Confidence 99865432211 112346999999999985 37899999999999984
No 81
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.97 E-value=4.4e-31 Score=291.36 Aligned_cols=190 Identities=23% Similarity=0.285 Sum_probs=160.6
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|++.+.||+|+||.||+|++..+++.||+|++... .......+.+|+.+++.++|++|+++++++. ..+.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~-----~~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQ-----DENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----cCCE
Confidence 3688999999999999999999999999999998642 2233456788999999999999999999854 4458
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||++||+|.+++.+.. ..+++..+..++.|++.||+|+|++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~-----~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG 147 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFE-----DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFG 147 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEecc
Confidence 899999999999999997642 3578889999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~~f 914 (914)
+|+....... .......||+.|||||++. +.++|+||+||++|||+
T Consensus 148 ~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell 202 (331)
T cd05624 148 SCLKMNQDGT-------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML 202 (331)
T ss_pred ceeeccCCCc-------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhh
Confidence 9976543211 1112356999999999874 36799999999999985
No 82
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.97 E-value=2.1e-31 Score=295.31 Aligned_cols=198 Identities=22% Similarity=0.356 Sum_probs=157.9
Q ss_pred hhcccccCcccCCccEEEEEEEEC-----CCcEEEEEEEeeccC-CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILG-----DDEMVVAVKVINLKQ-KGASKSFVSECEALRNI-RHRNLIKIITICSSTDF 776 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 776 (914)
.++|++.+.||+|+||.||+|++. .+++.||||+++... ....+.+.+|+++++++ +||||++++++|...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP-- 83 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC--
Confidence 467999999999999999999852 345689999986432 23346789999999999 899999999987432
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcc---------------------------------------------------
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQV--------------------------------------------------- 805 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------------------------------------------- 805 (914)
....++||||+++|+|.+++.......
T Consensus 84 --~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 84 --NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred --CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 245789999999999999997532100
Q ss_pred -----cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccccccccccccCCCCc
Q 042766 806 -----EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSS 880 (914)
Q Consensus 806 -----~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~ 880 (914)
....+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+|+......... .
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~------~ 232 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV------R 232 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchh------c
Confidence 013578888999999999999999999 99999999999999999999999999998653321110 1
Q ss_pred cccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 881 SIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 881 ~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.....+|+.|||||++. +.++|||||||++|||+
T Consensus 233 ~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~ 270 (338)
T cd05102 233 KGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIF 270 (338)
T ss_pred ccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHH
Confidence 11234678899999984 57899999999999874
No 83
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.6e-32 Score=281.63 Aligned_cols=191 Identities=24% Similarity=0.361 Sum_probs=166.6
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
....|..-++||+|+||.||-|+.+.||+.||+|.+.++ .+........|-.+++++..+.||.+-.. |+..
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA-----feTk 257 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA-----FETK 257 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee-----ecCC
Confidence 345678889999999999999999999999999988643 34455677899999999999999987655 6777
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
+..++||..|.||+|.-+|.+.+. ..+++..+..++.+|+.||++||.. +||.||+||+|||+|+.|+++|+|
T Consensus 258 d~LClVLtlMNGGDLkfHiyn~g~----~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISD 330 (591)
T KOG0986|consen 258 DALCLVLTLMNGGDLKFHIYNHGN----PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISD 330 (591)
T ss_pred CceEEEEEeecCCceeEEeeccCC----CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeec
Confidence 799999999999999988887653 5799999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~f 914 (914)
.|+|..+.+.. ...+.+||.+|||||++ ++...|-||+||.+|||+
T Consensus 331 LGLAvei~~g~---------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi 380 (591)
T KOG0986|consen 331 LGLAVEIPEGK---------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMI 380 (591)
T ss_pred cceEEecCCCC---------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHH
Confidence 99998775432 12245899999999999 568899999999999984
No 84
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=8.2e-33 Score=265.28 Aligned_cols=187 Identities=24% Similarity=0.376 Sum_probs=159.0
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
..++|++.+.||+|+|+.||++.++.+|+.+|+|++... .....+.+.+|+.+.+.++||||+++.+. +....
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~t-----i~~~~ 83 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS-----IQEES 83 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhh-----hcccc
Confidence 346788889999999999999999999999999999643 33466789999999999999999999876 44456
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC---CcEEE
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHV 857 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~---~~~ki 857 (914)
+.|+|+|+|+|++|..-+-.+ ..+++..+-.++.||++|+.|+|.+ +|||||+||+|+++... ..+|+
T Consensus 84 ~~ylvFe~m~G~dl~~eIV~R------~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL 154 (355)
T KOG0033|consen 84 FHYLVFDLVTGGELFEDIVAR------EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKL 154 (355)
T ss_pred eeEEEEecccchHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceee
Confidence 899999999999997644332 4678889999999999999999999 99999999999999643 46999
Q ss_pred ecccccccccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccc
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVH 912 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~ 912 (914)
+|||+|..+.+. ....+++|||+|||||++ ++..+|||+-|+++|.
T Consensus 155 ~~FGvAi~l~~g---------~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfi 204 (355)
T KOG0033|consen 155 ADFGLAIEVNDG---------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYI 204 (355)
T ss_pred cccceEEEeCCc---------cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHH
Confidence 999999876532 234467999999999999 5799999999988764
No 85
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.97 E-value=5.2e-31 Score=285.19 Aligned_cols=188 Identities=25% Similarity=0.408 Sum_probs=158.4
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
++|+..+.||+|+||.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++. .....+
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~~ 79 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIH-----TERCLT 79 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEc-----CCCeEE
Confidence 57899999999999999999999999999999997443 233457789999999999999999999853 344789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++ +|.+++...+ ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 80 lv~e~~~~-~l~~~l~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~ 150 (288)
T cd07871 80 LVFEYLDS-DLKQYLDNCG-----NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLA 150 (288)
T ss_pred EEEeCCCc-CHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcce
Confidence 99999974 9999887543 3578889999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+...... .......||+.|||||++. +.++|+||+||++|+|+
T Consensus 151 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~ 198 (288)
T cd07871 151 RAKSVPT--------KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMA 198 (288)
T ss_pred eeccCCC--------ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHH
Confidence 7543211 1112346899999999884 47899999999999874
No 86
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.97 E-value=6.5e-31 Score=293.09 Aligned_cols=196 Identities=23% Similarity=0.303 Sum_probs=163.4
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|.+.+.||+|+||+||+|++..+++.||||+++... ......+.+|+++++.++||||+++++++ +..+.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSF-----QDEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhe-----ecCCe
Confidence 36889999999999999999999999999999997432 24456788999999999999999999874 34458
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg 146 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRK------DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFG 146 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCC
Confidence 99999999999999999764 3688899999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccc---------------------cccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLD---------------------IASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~---------------------~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++........ .............||+.|+|||++. +.++||||+||++|||+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 224 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEML 224 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhc
Confidence 99865432200 0000011123457999999999985 47999999999999985
No 87
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.97 E-value=6.2e-31 Score=291.84 Aligned_cols=194 Identities=25% Similarity=0.322 Sum_probs=160.7
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|++.+.||+|+||.||+|++..+++.||||+++.. ......++.+|++++++++||||+++++++...........+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 478889999999999999999999999999998632 223345788999999999999999999987655444445689
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||++ ++|.+++... ..+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 81 lv~e~~~-~~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 81 VVFELME-SDLHQVIKAN------DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred EEEecCC-CCHHHHHHhc------ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccc
Confidence 9999995 6999988754 3588999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh------hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~~~~~~f 914 (914)
+........ ........||+.|+|||++. +.++||||+||++|||+
T Consensus 151 ~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~ 202 (338)
T cd07859 151 RVAFNDTPT-----AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVL 202 (338)
T ss_pred cccccccCc-----cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHH
Confidence 864321110 11122457999999999873 46899999999999874
No 88
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.4e-31 Score=260.46 Aligned_cols=189 Identities=28% Similarity=0.401 Sum_probs=162.6
Q ss_pred HHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-----c---chHHHHHHHHHHHhc-CCCCcceEEeEe
Q 042766 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-----G---ASKSFVSECEALRNI-RHRNLIKIITIC 771 (914)
Q Consensus 701 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~---~~~~~~~E~~~l~~l-~h~niv~l~~~~ 771 (914)
+.....|...+.+|+|..++|.+|.++.++..+|+|++..... . -.++..+|+.+++++ .||+|+++.++|
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 3445678888999999999999999999999999999974321 1 134667899999998 699999999984
Q ss_pred ecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC
Q 042766 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY 851 (914)
Q Consensus 772 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~ 851 (914)
+...+.++|+|.|+.|.|.+++... ..+++.+..+|++|+.+|+.|||.+ .|||||+||+|||+|+
T Consensus 93 -----es~sF~FlVFdl~prGELFDyLts~------VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILldd 158 (411)
T KOG0599|consen 93 -----ESDAFVFLVFDLMPRGELFDYLTSK------VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDD 158 (411)
T ss_pred -----cCcchhhhhhhhcccchHHHHhhhh------eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeecc
Confidence 4555889999999999999999764 6799999999999999999999999 9999999999999999
Q ss_pred CCcEEEecccccccccccccccccCCCCccccccCcccccccchh----------hhhhcccCcccccccc
Q 042766 852 DMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----------FMLYTHIPSFSCTNVH 912 (914)
Q Consensus 852 ~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----------~~~~~Di~s~g~~~~~ 912 (914)
+.++||+|||+|+.+...+ .-...||||+|.|||.+ ++..+|+|+.|++.|.
T Consensus 159 n~~i~isDFGFa~~l~~Ge---------kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyT 220 (411)
T KOG0599|consen 159 NMNIKISDFGFACQLEPGE---------KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYT 220 (411)
T ss_pred ccceEEeccceeeccCCch---------hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHH
Confidence 9999999999998765432 23357999999999998 4689999999988764
No 89
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=1.5e-30 Score=287.70 Aligned_cols=188 Identities=22% Similarity=0.257 Sum_probs=157.0
Q ss_pred cccccCcccCCccEEEEEEEEC---CCcEEEEEEEeecc----CCcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCC
Q 042766 706 EFSSSNMIGQGRFGTVYKGILG---DDEMVVAVKVINLK----QKGASKSFVSECEALRNIR-HRNLIKIITICSSTDFE 777 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 777 (914)
+|++.+.||+|+||.||+|+.. .+++.||+|+++.. .....+.+.+|++++++++ ||+|+++++++ +
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAF-----Q 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEE-----e
Confidence 4788899999999999999874 46889999999642 2233456788999999994 99999999874 4
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEE
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHV 857 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki 857 (914)
..+..++||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl 146 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQR------DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVL 146 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEE
Confidence 445789999999999999998754 3588899999999999999999999 9999999999999999999999
Q ss_pred ecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+|||+++.+..... .......||+.|||||++. +.++||||+||++|||+
T Consensus 147 ~DfG~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 201 (332)
T cd05614 147 TDFGLSKEFLSEEK-------ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELL 201 (332)
T ss_pred eeCcCCccccccCC-------CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhh
Confidence 99999986532211 1122457999999999984 35799999999999984
No 90
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.97 E-value=1e-30 Score=288.76 Aligned_cols=190 Identities=23% Similarity=0.281 Sum_probs=159.9
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|++.+.||+|+||.||+|++..+++.||+|++... .......+.+|+.++..++|++|+++++++. ....
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ-----DENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe-----cCCE
Confidence 3688899999999999999999999999999998632 2233456888999999999999999998854 3457
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++.+.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~-----~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG 147 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFE-----DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 147 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecc
Confidence 899999999999999997643 3578889999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~~f 914 (914)
+++....... ......+||+.|||||++. +.++|+|||||++|||+
T Consensus 148 ~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell 202 (332)
T cd05623 148 SCLKLMEDGT-------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEML 202 (332)
T ss_pred hheecccCCc-------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHh
Confidence 9975432111 1112357999999999984 46899999999999874
No 91
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.2e-31 Score=264.75 Aligned_cols=197 Identities=22% Similarity=0.353 Sum_probs=165.5
Q ss_pred HHHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC-CCCcceEEeEeecCC
Q 042766 697 YAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR-HRNLIKIITICSSTD 775 (914)
Q Consensus 697 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 775 (914)
+++.-+.++ +.||+|+|+.|--|+...++..||||++++.......+..+|++++.+++ |+||++++++
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLief----- 144 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEF----- 144 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHH-----
Confidence 445444443 68999999999999999999999999998776666788999999999995 9999999999
Q ss_pred CCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC--
Q 042766 776 FEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM-- 853 (914)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~-- 853 (914)
|++....|+|||-|.||+|.+.|.++ ..+++.++.+++.+|+.||.|||.+ ||.|||+||+|||.....
T Consensus 145 FEdd~~FYLVfEKm~GGplLshI~~~------~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~v 215 (463)
T KOG0607|consen 145 FEDDTRFYLVFEKMRGGPLLSHIQKR------KHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKV 215 (463)
T ss_pred hcccceEEEEEecccCchHHHHHHHh------hhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCc
Confidence 77777999999999999999999876 4689999999999999999999999 999999999999997654
Q ss_pred -cEEEecccccccccccccccccCCCCccccccCcccccccchh---------hhhhcccCccccccccc
Q 042766 854 -VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF---------FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 854 -~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~---------~~~~~Di~s~g~~~~~~ 913 (914)
-|||+||.++.-+.-...-.+.. ...-...+|+..|||||+. |+.+.|.||+|+++|.|
T Consensus 216 sPvKiCDfDLgSg~k~~~~~spas-tP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYIm 284 (463)
T KOG0607|consen 216 SPVKICDFDLGSGIKLNNDCSPAS-TPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIM 284 (463)
T ss_pred CceeeeccccccccccCCCCCCCC-CccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHH
Confidence 58999999986544322111111 2233457899999999997 57999999999999977
No 92
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.97 E-value=9.1e-31 Score=285.55 Aligned_cols=189 Identities=24% Similarity=0.396 Sum_probs=157.9
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.++|++.+.||+|+||.||+|++..+++.||||+++... ......+.+|++++++++||||+++++++. .....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~ 78 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIH-----TKETL 78 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEe-----cCCeE
Confidence 367999999999999999999999899999999997443 233456789999999999999999999854 34578
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||++ +++.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~ 149 (303)
T cd07869 79 TLVFEYVH-TDLCQYMDKHP-----GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGL 149 (303)
T ss_pred EEEEECCC-cCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCc
Confidence 99999995 68888876543 3578888999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
++...... .......||+.|||||++. +.++|+||+||++|||+
T Consensus 150 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~ 198 (303)
T cd07869 150 ARAKSVPS--------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMI 198 (303)
T ss_pred ceeccCCC--------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence 97543211 1112346899999999974 46789999999999873
No 93
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.97 E-value=1.5e-30 Score=286.15 Aligned_cols=182 Identities=25% Similarity=0.308 Sum_probs=153.4
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||.||+|++..+++.||+|+++.. .....+.+..|.++++.+ +||+|+++++++. ..+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~-----~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQ-----TKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE-----cCCeEEEEE
Confidence 4699999999999999999999999999743 233445677899998876 7999999999854 345789999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 76 EYVNGGDLMFQIQRS------RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred eCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 999999999988754 3578889999999999999999999 9999999999999999999999999998753
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.... .......||+.|||||++. +.++|+||+||++|||+
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~ 190 (321)
T cd05591 147 ILNG--------VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMM 190 (321)
T ss_pred ccCC--------ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHh
Confidence 2211 1122357999999999984 57899999999999984
No 94
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=285.68 Aligned_cols=186 Identities=30% Similarity=0.364 Sum_probs=162.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC---cchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~ 779 (914)
...|++.+.||+|.||+||+|+.+.+|+.+|+|++.+... ...+.+.+|+.+|+++. |||||++++. ++..
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~-----~e~~ 108 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDA-----FEDP 108 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEE-----EEcC
Confidence 3578888999999999999999999999999999975543 23468999999999998 9999999999 4555
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC----CcE
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD----MVA 855 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~----~~~ 855 (914)
...++|||+++||.|.+.+... .+++..+..++.|++.|++|||+. +|+|||+||+|+|+... +.+
T Consensus 109 ~~~~lvmEL~~GGeLfd~i~~~-------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~i 178 (382)
T KOG0032|consen 109 DSVYLVMELCEGGELFDRIVKK-------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRI 178 (382)
T ss_pred CeEEEEEEecCCchHHHHHHHc-------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcE
Confidence 5899999999999999998754 289999999999999999999998 99999999999999643 579
Q ss_pred EEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 856 HVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 856 ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
|++|||+|..... .......+||++|+|||+.. +..+|+||.|++.|.|
T Consensus 179 k~~DFGla~~~~~---------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiL 231 (382)
T KOG0032|consen 179 KLIDFGLAKFIKP---------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYIL 231 (382)
T ss_pred EEeeCCCceEccC---------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHH
Confidence 9999999987653 12334679999999999994 6999999999998875
No 95
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.97 E-value=2.1e-30 Score=285.39 Aligned_cols=182 Identities=27% Similarity=0.332 Sum_probs=151.2
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHH-HHHhcCCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECE-ALRNIRHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||+||+|++..+++.||+|++.... ......+.+|.. +++.++||||+++++++. ..+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~-----~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ-----TTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEe-----cCCEEEEEE
Confidence 46999999999999999999999999996432 223345556655 467799999999998854 345789999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 76 DFVNGGELFFHLQRE------RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred cCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 999999999988654 4688999999999999999999999 9999999999999999999999999998743
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~ 190 (325)
T cd05604 147 IAQS--------DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEML 190 (325)
T ss_pred CCCC--------CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhh
Confidence 2111 1122457999999999984 47899999999999985
No 96
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.97 E-value=1.3e-30 Score=285.60 Aligned_cols=182 Identities=23% Similarity=0.310 Sum_probs=151.8
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||+||+|++..+++.||+|+++... ....+.+..|.+++... +||||+++++++. .....++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~-----~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQ-----TKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEE-----cCCEEEEEE
Confidence 46999999999999999999999999997432 23345566777777654 8999999998853 345789999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+..
T Consensus 76 e~~~gg~L~~~~~~~------~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 76 EYLNGGDLMFHIQSS------GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred cCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 999999999998754 3588889999999999999999999 9999999999999999999999999999754
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.... ......+||+.|||||++. +.++|+||+||+++||+
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell 190 (316)
T cd05592 147 MNGE--------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEML 190 (316)
T ss_pred CCCC--------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHH
Confidence 3211 1122457999999999984 57899999999999874
No 97
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.97 E-value=1.4e-30 Score=286.51 Aligned_cols=187 Identities=21% Similarity=0.263 Sum_probs=156.3
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCce
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 781 (914)
+|.+.+.||+|+||.||+|++..+++.||+|+++... ....+.+..|..++..+ .|++|+++++++. ..+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-----~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQ-----TMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEe-----cCCE
Confidence 5788899999999999999999999999999997432 22334667788888877 5788999988853 3457
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQV------GRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCC
Confidence 89999999999999998754 3578899999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++...... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 147 ~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 195 (323)
T cd05616 147 MCKENMWDG--------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 195 (323)
T ss_pred CceecCCCC--------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHH
Confidence 997532111 1122357999999999985 57899999999999874
No 98
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-31 Score=242.30 Aligned_cols=186 Identities=24% Similarity=0.407 Sum_probs=159.0
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|...++||+|+||+||+|+.+++++.||+|+++..+ ++......+|+.+++.++|.|||+++++. ......-
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvl-----hsdkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhh-----ccCceeE
Confidence 5677789999999999999999999999999998553 45567889999999999999999999873 3345788
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+|+|||. .+|..+...-. ..++...+..++.|+++|+.|+|++ ++.|||+||+|.+|..+|+.|++|||+|
T Consensus 78 lvfe~cd-qdlkkyfdsln-----g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfgla 148 (292)
T KOG0662|consen 78 LVFEFCD-QDLKKYFDSLN-----GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLA 148 (292)
T ss_pred EeHHHhh-HHHHHHHHhcC-----CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchh
Confidence 9999994 58998887643 4678888999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhhh-----hhcccCccccccccc
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM-----LYTHIPSFSCTNVHH 913 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~-----~~~Di~s~g~~~~~~ 913 (914)
+.+.-+. .+-...+-|.+|.+|.+++| ...|+||-||++.|+
T Consensus 149 rafgipv--------rcysaevvtlwyrppdvlfgakly~tsidmwsagcifael 195 (292)
T KOG0662|consen 149 RAFGIPV--------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195 (292)
T ss_pred hhcCCce--------EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHH
Confidence 9765321 12234568999999999964 889999999998774
No 99
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.97 E-value=1.7e-30 Score=286.27 Aligned_cols=182 Identities=22% Similarity=0.284 Sum_probs=153.5
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++.++ +||||+++++++.. ....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~-----~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-----ESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe-----CCEEEEEE
Confidence 46999999999999999999999999997542 23345677899988876 79999999998543 45789999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~~~L~~~~~~~------~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 76 EYVNGGDLMFHMQRQ------RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 146 (329)
T ss_pred eCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence 999999999988654 3688999999999999999999999 9999999999999999999999999999753
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.... .......||+.|+|||++. +.++|+||+||++|+|+
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 190 (329)
T cd05618 147 LRPG--------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 190 (329)
T ss_pred cCCC--------CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHh
Confidence 2111 1122357999999999985 47899999999999874
No 100
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.97 E-value=1.3e-30 Score=286.97 Aligned_cols=187 Identities=22% Similarity=0.268 Sum_probs=156.4
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCC-CcceEEeEeecCCCCCCce
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHR-NLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~~~~ 781 (914)
+|++.+.||+|+||.||+|++..+++.||+|+++.. .....+.+..|+++++.++|+ +|+++++++. ..+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-----~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-----TMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEE-----cCCE
Confidence 478889999999999999999999999999999743 233456788899999999875 5777877743 3457
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQV------GKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecC
Confidence 89999999999999998754 3578889999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++...... ......+||+.|+|||++. +.++|+||+||++|||+
T Consensus 147 ~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell 195 (324)
T cd05587 147 MCKENIFGG--------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 195 (324)
T ss_pred cceecCCCC--------CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHH
Confidence 987432111 1122457999999999985 47899999999999874
No 101
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.97 E-value=1.4e-30 Score=285.93 Aligned_cols=182 Identities=24% Similarity=0.306 Sum_probs=153.4
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||.||+|+++.+++.||||+++.. .....+.+.+|.++++.. +||||+++++++. ..+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~-----~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQ-----TPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEE-----cCCEEEEEE
Confidence 4689999999999999999999999999743 233456778888888876 6999999999853 445789999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 Ey~~~g~L~~~i~~~------~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 76 EFVNGGDLMFHIQKS------RRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 146 (320)
T ss_pred cCCCCchHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence 999999999988764 3588899999999999999999999 9999999999999999999999999998753
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.... .......||+.|||||++. +.++|+||+||++|+|+
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 190 (320)
T cd05590 147 IFNG--------KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEML 190 (320)
T ss_pred CcCC--------CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHh
Confidence 2111 1122357999999999985 57899999999999874
No 102
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.97 E-value=1.5e-30 Score=284.06 Aligned_cols=196 Identities=23% Similarity=0.383 Sum_probs=157.5
Q ss_pred hcccccCcccCCccEEEEEEEECC----------------CcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGD----------------DEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKI 767 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l 767 (914)
++|.+.+.||+|+||.||+|++.. ++..||+|++.... .....++.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578889999999999999998642 34579999987543 2234578999999999999999999
Q ss_pred EeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCc-------------ccccCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 042766 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQ-------------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQ 834 (914)
Q Consensus 768 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~ 834 (914)
++++... +..++||||+++|+|.+++...... .....+++.++.+++.|++.|++|||+.
T Consensus 85 ~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-- 157 (304)
T cd05096 85 LGVCVDE-----DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL-- 157 (304)
T ss_pred EEEEecC-----CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC--
Confidence 9996543 3689999999999999998653211 1113578888999999999999999999
Q ss_pred CCcEecCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccc
Q 042766 835 PPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTN 910 (914)
Q Consensus 835 ~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~ 910 (914)
+|+||||||+||+++.++.+||+|||+++......... ......++..|||||++. +.++|+|||||++
T Consensus 158 -~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l 230 (304)
T cd05096 158 -NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYR------IQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTL 230 (304)
T ss_pred -CccccCcchhheEEcCCccEEECCCccceecccCceeE------ecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHH
Confidence 99999999999999999999999999998654322110 111234688999999974 5889999999999
Q ss_pred cccC
Q 042766 911 VHHF 914 (914)
Q Consensus 911 ~~~f 914 (914)
|||+
T Consensus 231 ~el~ 234 (304)
T cd05096 231 WEIL 234 (304)
T ss_pred HHHH
Confidence 9863
No 103
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.97 E-value=2.7e-30 Score=284.31 Aligned_cols=182 Identities=29% Similarity=0.363 Sum_probs=150.6
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHH-HHHhcCCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECE-ALRNIRHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|.. +++.++||||+++++++. ..+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~-----~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ-----TADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEE-----eCCEEEEEE
Confidence 46999999999999999999999999996432 222344555555 467899999999998854 345789999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 76 DYVNGGELFFHLQRE------RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (323)
T ss_pred cCCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence 999999999998754 3678889999999999999999999 9999999999999999999999999998753
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell 190 (323)
T cd05575 147 IEHS--------KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEML 190 (323)
T ss_pred ccCC--------CccccccCChhhcChhhhcCCCCCccccccccchhhhhhh
Confidence 2211 1122457999999999984 47899999999999984
No 104
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.97 E-value=2.5e-30 Score=284.37 Aligned_cols=182 Identities=28% Similarity=0.339 Sum_probs=150.2
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHH-HHHhcCCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECE-ALRNIRHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||.||+|++..+++.||+|++.... ......+.+|.. +++.++||||+++++++. ..+..++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~-----~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQ-----TAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEE-----cCCEEEEEE
Confidence 46999999999999999999999999996432 223344555554 578899999999998854 345789999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 76 DYVNGGELFFHLQRE------RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (321)
T ss_pred cCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence 999999999888654 3578888999999999999999998 9999999999999999999999999998753
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.... ......+||+.|+|||++. +.++|+||+||++|||+
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 190 (321)
T cd05603 147 VEPE--------ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEML 190 (321)
T ss_pred CCCC--------CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhh
Confidence 2211 1122457999999999984 47899999999999984
No 105
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.97 E-value=1.9e-30 Score=286.07 Aligned_cols=182 Identities=21% Similarity=0.263 Sum_probs=153.9
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|..+++++ +||||+++++++. .....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~-----~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQ-----TESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEE-----cCCEEEEEE
Confidence 46899999999999999999999999997432 23345678899999998 7999999999854 345789999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~~~~~------~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 146 (329)
T cd05588 76 EFVSGGDLMFHMQRQ------RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 146 (329)
T ss_pred eCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcccccc
Confidence 999999999988654 3689999999999999999999999 9999999999999999999999999998742
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.... ......+||+.|||||++. +.++|+||+||++|+|+
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~ 190 (329)
T cd05588 147 IRPG--------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 190 (329)
T ss_pred ccCC--------CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHH
Confidence 2111 1122457999999999985 47899999999999874
No 106
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97 E-value=3.2e-30 Score=279.49 Aligned_cols=193 Identities=24% Similarity=0.440 Sum_probs=158.1
Q ss_pred hcccccCcccCCccEEEEEEEEC-CCcEEEEEEEeeccC--CcchHHHHHHHHHHHhc---CCCCcceEEeEeecCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILG-DDEMVVAVKVINLKQ--KGASKSFVSECEALRNI---RHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~ 778 (914)
++|++.+.||+|+||+||+|++. .+++.||+|+++... ......+.+|+++++++ +||||++++++|.....+.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888999999999999999985 457889999987443 22335667788887766 6999999999986544444
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
....++||||++ ++|.+++..... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~ 152 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 152 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEc
Confidence 557899999996 699999875432 4588999999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||+++...... ......||+.|+|||++. +.++|+||+||++|||+
T Consensus 153 Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 203 (290)
T cd07862 153 DFGLARIYSFQM---------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 203 (290)
T ss_pred cccceEeccCCc---------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHH
Confidence 999998654221 112356999999999984 57899999999999874
No 107
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.97 E-value=1.5e-30 Score=286.42 Aligned_cols=185 Identities=23% Similarity=0.319 Sum_probs=154.1
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHH---HhcCCCCcceEEeEeecCCCCCCc
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEAL---RNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++ +.++||||+++++++. ...
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~-----~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQ-----TED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEE-----cCC
Confidence 567889999999999999999999999999997432 23345667776665 5668999999999854 345
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++|+|..++.. ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~-------~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHT-------DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcc
Confidence 88999999999999988754 3589999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++...... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 146 g~~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 195 (324)
T cd05589 146 GLCKEGMGFG--------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEML 195 (324)
T ss_pred cCCccCCCCC--------CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHH
Confidence 9987432111 1122467999999999984 57899999999999974
No 108
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.97 E-value=3e-30 Score=284.21 Aligned_cols=182 Identities=30% Similarity=0.374 Sum_probs=149.4
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHH-HHHhcCCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECE-ALRNIRHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||+||+|++..+++.||+|++.... ......+.+|.. +++.++||||+++++++. ..+..++||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~-----~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ-----TADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEE-----cCCeEEEEE
Confidence 46999999999999999999999999997432 122234444444 567899999999998854 345789999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+|+..
T Consensus 76 e~~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 76 DYINGGELFYHLQRE------RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred eCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 999999999998764 3577888889999999999999999 9999999999999999999999999999753
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.... ......+||+.|||||++. +.++|+||+||++|+|+
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 190 (325)
T cd05602 147 IEHN--------GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 190 (325)
T ss_pred ccCC--------CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHh
Confidence 2211 1122457999999999984 47899999999999985
No 109
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.97 E-value=2.7e-30 Score=284.17 Aligned_cols=182 Identities=23% Similarity=0.310 Sum_probs=152.2
Q ss_pred CcccCCccEEEEEEEEC---CCcEEEEEEEeecc----CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 711 NMIGQGRFGTVYKGILG---DDEMVVAVKVINLK----QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+.||+|+||.||+|+.. .+++.||+|+++.. .......+.+|++++++++||||+++++++.. .+..+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-----~~~~~ 76 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT-----GGKLY 76 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec-----CCeEE
Confidence 67999999999999874 46889999999743 22334567889999999999999999988543 44789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 77 lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 77 LILEYLSGGELFMHLERE------GIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred EEEeCCCCchHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCC
Confidence 999999999999998764 3577888889999999999999999 9999999999999999999999999998
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+...... .......||+.|+|||++. +.++||||+||++|||+
T Consensus 148 ~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 194 (323)
T cd05584 148 KESIHEG--------TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDML 194 (323)
T ss_pred eecccCC--------CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHh
Confidence 7532211 1112357999999999984 47899999999999974
No 110
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=1.5e-30 Score=300.48 Aligned_cols=194 Identities=21% Similarity=0.254 Sum_probs=162.5
Q ss_pred hcccccCcccCCccEEEEEEEECCC-cEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDD-EMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
..|.+.+.||+|+||.||+|....+ ++.||+|.+..........+.+|+++++.++||||+++++++.. .+..+
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-----~~~~~ 141 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKS-----DDKLL 141 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE-----CCEEE
Confidence 3488999999999999999998777 78899998765555555678889999999999999999999644 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++|+|.++++.... ....+++.++..++.|++.||+|+|++ +|+||||||+|||++.++.+||+|||+|
T Consensus 142 lv~E~~~gg~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla 216 (478)
T PTZ00267 142 LIMEYGSGGDLNKQIKQRLK--EHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFS 216 (478)
T ss_pred EEEECCCCCCHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCc
Confidence 99999999999998864321 124688899999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+.+..... .......+||+.|||||++. +.++||||+||++|||+
T Consensus 217 ~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 265 (478)
T PTZ00267 217 KQYSDSVS------LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELL 265 (478)
T ss_pred eecCCccc------cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHH
Confidence 87643211 11122457999999999984 57899999999999985
No 111
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97 E-value=2.8e-30 Score=285.08 Aligned_cols=188 Identities=22% Similarity=0.339 Sum_probs=161.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.++|++.+.||+|+||.||+|++..++..||+|+++.... ...+.+.+|++++++++||||+++++++... +..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-----CEE
Confidence 3589999999999999999999999999999999975432 3346789999999999999999999986543 478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++|+|.+++... ..+++..+..++.|++.|+.|||+.+ +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 150 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEA------KRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGV 150 (331)
T ss_pred EEEeecCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcc
Confidence 9999999999999999764 35788899999999999999999852 699999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++...... .....||+.|+|||++. +.++|+||+||++|||+
T Consensus 151 ~~~~~~~~----------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 196 (331)
T cd06649 151 SGQLIDSM----------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELA 196 (331)
T ss_pred cccccccc----------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHH
Confidence 97653211 12346999999999985 47899999999999874
No 112
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.5e-30 Score=292.26 Aligned_cols=182 Identities=23% Similarity=0.297 Sum_probs=155.2
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
.+|++.+.||+|+||.||+|++..+++.||+|... ...+.+|++++++++||||+++++++.. ....++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~-----~~~~~l 160 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTY-----NKFTCL 160 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEE-----CCeeEE
Confidence 57999999999999999999999999999999653 2356789999999999999999998543 347899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+. ++|.+++... ..+++.+++.++.|++.||+|||++ +||||||||+||+++.++.+||+|||+|+
T Consensus 161 v~e~~~-~~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~ 230 (391)
T PHA03212 161 ILPRYK-TDLYCYLAAK------RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAAC 230 (391)
T ss_pred EEecCC-CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccc
Confidence 999994 7899888654 3578899999999999999999999 99999999999999999999999999997
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
...... ........||+.|+|||++. +.++|+||+||++|||+
T Consensus 231 ~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 277 (391)
T PHA03212 231 FPVDIN-------ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMA 277 (391)
T ss_pred cccccc-------ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHH
Confidence 543211 11122457999999999984 57899999999999873
No 113
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=4.7e-31 Score=286.61 Aligned_cols=186 Identities=23% Similarity=0.451 Sum_probs=160.9
Q ss_pred cccCcccCCccEEEEEEEECCCcEEEEEEEeec----cCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 708 SSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL----KQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 708 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+..++||+|+|-+||+|.+..+|..||.-.++. +.....++|..|+.+|+.++|||||++|.++.+.. .....
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~---n~~in 119 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD---NKTIN 119 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC---Cceee
Confidence 556799999999999999999999998655542 23445589999999999999999999999976554 24678
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC-CcEEEecccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGL 862 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~-~~~ki~DFGl 862 (914)
+|+|.+..|+|..|+++++ .++......|++||++||.|||++ .|+|||||||.+||+|+.+ |.|||+|.|+
T Consensus 120 ~iTEL~TSGtLr~Y~kk~~------~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGL 192 (632)
T KOG0584|consen 120 FITELFTSGTLREYRKKHR------RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGL 192 (632)
T ss_pred eeeecccCCcHHHHHHHhc------cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhH
Confidence 9999999999999999874 578889999999999999999998 7899999999999999865 8999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchh---hhhhcccCccccccccc
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF---FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~---~~~~~Di~s~g~~~~~~ 913 (914)
|+....... ...+|||.|||||++ |...+||||||..+.||
T Consensus 193 Atl~r~s~a----------ksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEM 236 (632)
T KOG0584|consen 193 ATLLRKSHA----------KSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEM 236 (632)
T ss_pred HHHhhcccc----------ceeccCccccChHHHhhhcchhhhhhhhhHHHHHH
Confidence 997654321 236899999999999 57999999999998887
No 114
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=304.23 Aligned_cols=196 Identities=24% Similarity=0.305 Sum_probs=170.7
Q ss_pred HHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeec---cCCcchHHHHHHHHHHHhcCCCCcceEEeEeecC
Q 042766 698 AELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL---KQKGASKSFVSECEALRNIRHRNLIKIITICSST 774 (914)
Q Consensus 698 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 774 (914)
.++.-..++|.+.++||+|+||.|..++++.++++||+|++.+ -.+.....|..|-.+|...+.+-|+.++..
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA---- 143 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA---- 143 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH----
Confidence 3444556799999999999999999999999999999999975 345566789999999999999999998765
Q ss_pred CCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc
Q 042766 775 DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV 854 (914)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~ 854 (914)
|++..+.|+|||||+||+|-..+.+.+ .+++..+..|+..|+-|+.-+|+. |+|||||||+|||+|..|+
T Consensus 144 -FQD~~~LYlVMdY~pGGDlltLlSk~~------~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GH 213 (1317)
T KOG0612|consen 144 -FQDERYLYLVMDYMPGGDLLTLLSKFD------RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGH 213 (1317)
T ss_pred -hcCccceEEEEecccCchHHHHHhhcC------CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCc
Confidence 788889999999999999999998763 688999999999999999999999 9999999999999999999
Q ss_pred EEEecccccccccccccccccCCCCccccccCcccccccchh---------hhhhcccCcccccccccC
Q 042766 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF---------FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~---------~~~~~Di~s~g~~~~~~f 914 (914)
+|++|||.+-.+..++. ..+...+|||.|++||++ ||.-+|.||+|+.+|||+
T Consensus 214 ikLADFGsClkm~~dG~-------V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMl 275 (1317)
T KOG0612|consen 214 IKLADFGSCLKMDADGT-------VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEML 275 (1317)
T ss_pred EeeccchhHHhcCCCCc-------EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHH
Confidence 99999998865543221 123346899999999998 468899999999999995
No 115
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.97 E-value=2.7e-30 Score=283.08 Aligned_cols=182 Identities=21% Similarity=0.301 Sum_probs=152.3
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||.||+|+++.+++.||+|+++... ....+....|.+++... +||+|+++++++. ..+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-----~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQ-----TKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEE-----eCCEEEEEE
Confidence 46999999999999999999999999997432 23445667788888764 8999999999854 345899999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~g~L~~~i~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 76 EFLNGGDLMFHIQDK------GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred CCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 999999999998754 3578889999999999999999999 9999999999999999999999999998743
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.... ......+||+.|+|||++. +.++|+||+||++|||+
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~ 190 (316)
T cd05620 147 VFGD--------NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEML 190 (316)
T ss_pred ccCC--------CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHH
Confidence 2111 1122457999999999984 47899999999999874
No 116
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-31 Score=307.18 Aligned_cols=192 Identities=29% Similarity=0.441 Sum_probs=164.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
+-+++...+||.|.||.||-|...++|+..|+|.++..+ ....+...+|..++..++|||+|++||+-.+.+ .
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe-----k 1308 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE-----K 1308 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHH-----H
Confidence 345677789999999999999999999999999997543 344567889999999999999999999855443 6
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.+|.||||++|+|.+.+...+ ..++.....+..|++.|++|||++ |||||||||+||+++.+|.+|.+|||
T Consensus 1309 v~IFMEyC~~GsLa~ll~~gr------i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFG 1379 (1509)
T KOG4645|consen 1309 VYIFMEYCEGGSLASLLEHGR------IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFG 1379 (1509)
T ss_pred HHHHHHHhccCcHHHHHHhcc------hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeeccc
Confidence 889999999999999987642 456666677889999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhhh-------hhcccCccccccccc
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM-------LYTHIPSFSCTNVHH 913 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~-------~~~Di~s~g~~~~~~ 913 (914)
.|..+..+.. +.+..-...+||+.|||||++.+ .+.||||+||+++||
T Consensus 1380 sa~ki~~~~~----~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM 1434 (1509)
T KOG4645|consen 1380 SAVKIKNNAQ----TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEM 1434 (1509)
T ss_pred ceeEecCchh----cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEe
Confidence 9988765532 22344557899999999999963 789999999999998
No 117
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.97 E-value=3.2e-30 Score=282.37 Aligned_cols=182 Identities=24% Similarity=0.335 Sum_probs=152.2
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||+||+|++..+++.||||+++... ....+.+..|..+++.. +||||+++++++.. .+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~-----~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT-----KENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe-----CCEEEEEE
Confidence 46899999999999999999999999997532 23345667788888764 89999999998543 45789999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 ey~~~g~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05619 76 EYLNGGDLMFHIQSC------HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKEN 146 (316)
T ss_pred eCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence 999999999998754 3578889999999999999999999 9999999999999999999999999998753
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.... .......||+.|||||++. +.++|+||+||++|||+
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~ 190 (316)
T cd05619 147 MLGD--------AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEML 190 (316)
T ss_pred CCCC--------CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHH
Confidence 2111 1112357999999999984 57899999999999874
No 118
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.97 E-value=5.5e-30 Score=281.29 Aligned_cols=182 Identities=24% Similarity=0.306 Sum_probs=153.7
Q ss_pred CcccCCccEEEEEEEE---CCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEE
Q 042766 711 NMIGQGRFGTVYKGIL---GDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALV 785 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~---~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 785 (914)
+.||+|+||.||++++ ..+++.||+|+++... ......+.+|++++++++||||+++++++. ..+..++|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQ-----TEGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEE-----cCCEEEEE
Confidence 5799999999999986 3578999999997432 223456778999999999999999999854 34578999
Q ss_pred EecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 786 FEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 786 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
|||+++|+|.+++.+. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 77 ~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 77 LDFLRGGDLFTRLSKE------VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred EcCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence 9999999999998654 3688999999999999999999999 999999999999999999999999999976
Q ss_pred ccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 866 LSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
..... .......||+.|||||++. +.++|+||+||++|||+
T Consensus 148 ~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 192 (318)
T cd05582 148 SIDHE--------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 192 (318)
T ss_pred cCCCC--------CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeec
Confidence 43221 1122457999999999984 47899999999999985
No 119
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.97 E-value=2.5e-30 Score=279.87 Aligned_cols=188 Identities=23% Similarity=0.324 Sum_probs=157.5
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|++.+.||+|+||.||+|+++.+++.||+|+++... ....+.+.+|++++++++||||+++++++. ..+..+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 76 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFR-----RRGKLY 76 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEe-----cCCEEE
Confidence 6889999999999999999999999999999997442 233467889999999999999999998853 345789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||++++.+..+.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 77 lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~ 147 (287)
T cd07848 77 LVFEYVEKNMLELLEEMP------NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFA 147 (287)
T ss_pred EEEecCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCc
Confidence 999999987776554322 3588889999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+....... .......||+.|+|||++. +.++|+||+||++|||+
T Consensus 148 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~ 195 (287)
T cd07848 148 RNLSEGSN-------ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELS 195 (287)
T ss_pred cccccccc-------ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHH
Confidence 86543211 1112356999999999984 47899999999999874
No 120
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=274.08 Aligned_cols=187 Identities=21% Similarity=0.285 Sum_probs=161.9
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.-|...+.||+|.|++|-.|++.-+|+.||||++++.. ......+.+|++.|+-++|||||++|++ ++.....
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEV-----iDTQTKl 92 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEV-----IDTQTKL 92 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeeh-----hcccceE
Confidence 45777889999999999999999999999999997553 3344678899999999999999999998 4555589
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC-CCcEEEeccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY-DMVAHVGDFG 861 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DFG 861 (914)
|+|.|.-++|+|++||.++. ..+.+..+.+++.||+.|+.|+|.. .+|||||||+||.+-+ -|-||++|||
T Consensus 93 yLiLELGD~GDl~DyImKHe-----~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFG 164 (864)
T KOG4717|consen 93 YLILELGDGGDLFDYIMKHE-----EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFG 164 (864)
T ss_pred EEEEEecCCchHHHHHHhhh-----ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeecc
Confidence 99999999999999998775 5788999999999999999999998 8999999999998754 5899999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhhh-----hhcccCccccccccc
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM-----LYTHIPSFSCTNVHH 913 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~-----~~~Di~s~g~~~~~~ 913 (914)
++-.+... ..-...||+..|.|||++.| +++||||+|+++|.+
T Consensus 165 FSNkf~PG---------~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyML 212 (864)
T KOG4717|consen 165 FSNKFQPG---------KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYML 212 (864)
T ss_pred ccccCCCc---------chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHH
Confidence 99765432 22335799999999999965 899999999998753
No 121
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.97 E-value=3e-30 Score=283.68 Aligned_cols=187 Identities=22% Similarity=0.279 Sum_probs=155.8
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCce
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 781 (914)
+|+..+.||+|+||.||+|+++.+++.||+|+++.. .....+.+..|.++++.+. |++|+++++++ +..+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCF-----QTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEE-----ecCCE
Confidence 467788999999999999999999999999999743 2234456788999998886 46777888774 33457
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++... ..+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~------~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQV------GKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccc
Confidence 89999999999999998754 3588999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++...... .......||+.|||||++. +.++|+||+||+++||+
T Consensus 147 ~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell 195 (323)
T cd05615 147 MCKEHMVDG--------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEML 195 (323)
T ss_pred cccccCCCC--------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHH
Confidence 987532211 1122356999999999984 47899999999999874
No 122
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.96 E-value=5.1e-30 Score=282.35 Aligned_cols=182 Identities=22% Similarity=0.280 Sum_probs=153.9
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||+||+|++..+++.||+|+++... ....+.+.+|+.++.++ +||+|+++++++. .....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQ-----TTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEE-----eCCEEEEEE
Confidence 46999999999999999999999999997432 23345688999999888 6999999999853 345789999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~------~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~ 146 (327)
T cd05617 76 EYVNGGDLMFHMQRQ------RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEG 146 (327)
T ss_pred eCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceec
Confidence 999999999988654 3689999999999999999999999 9999999999999999999999999998743
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell 190 (327)
T cd05617 147 LGPG--------DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMM 190 (327)
T ss_pred cCCC--------CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHH
Confidence 2111 1122457999999999984 47899999999999874
No 123
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.96 E-value=7.1e-30 Score=275.84 Aligned_cols=188 Identities=23% Similarity=0.330 Sum_probs=158.4
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.|+..+.||+|+||.||+|++..+++.||+|++.... ......+.+|++++++++||||+++++++. ..+..
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-----TKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeec-----CCCeE
Confidence 3778899999999999999999899999999986432 222346778999999999999999998853 34578
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMGN----PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred EEEEeccCCCcHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 999999999999988865321 4688999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++...... ......||+.|||||++. +.++|+||+||++|||+
T Consensus 149 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~ 195 (285)
T cd05605 149 AVEIPEGE---------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMI 195 (285)
T ss_pred ceecCCCC---------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHH
Confidence 98653221 111346999999999984 57899999999999874
No 124
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.96 E-value=5.3e-30 Score=302.39 Aligned_cols=202 Identities=25% Similarity=0.320 Sum_probs=161.7
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|++.+.||+|+||.||+|++..+++.||+|+++... ....+++.+|++++++++||||+++++++.. .+.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d-----~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD-----GDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee-----CCE
Confidence 57899999999999999999999999999999996432 2234678999999999999999999998644 347
Q ss_pred EeEEEecccCCCHHHHHhccCCc-----ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEE
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQ-----VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAH 856 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~-----~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 856 (914)
.++||||++||+|.+++...... ......++..+++++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEE
Confidence 89999999999999998642110 1123466778899999999999999999 999999999999999999999
Q ss_pred Eecccccccccccccccc----------cCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 857 VGDFGLAKFLSNHHLDIA----------SKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 857 i~DFGla~~~~~~~~~~~----------~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+|||+|+.......... ..........+||+.|||||++. +.++|+||+||+++||+
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELL 225 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQML 225 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHH
Confidence 999999987632110000 00001112357999999999985 47899999999999873
No 125
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.96 E-value=5.7e-30 Score=275.84 Aligned_cols=184 Identities=24% Similarity=0.319 Sum_probs=153.3
Q ss_pred ccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecc
Q 042766 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYM 789 (914)
Q Consensus 713 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 789 (914)
||+|+||+||+|++..+++.||+|.+.... ....+.+..|++++++++||||+++.+++. .....++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQ-----TKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEc-----CCCeEEEEEeCC
Confidence 699999999999999999999999986432 223356788999999999999999988743 345789999999
Q ss_pred cCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccc
Q 042766 790 ENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869 (914)
Q Consensus 790 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~ 869 (914)
++|+|.+++..... ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 76 ~~g~L~~~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 150 (280)
T cd05608 76 NGGDLRYHIYNVDE--ENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG 150 (280)
T ss_pred CCCCHHHHHHhccc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCC
Confidence 99999988754321 124689999999999999999999999 9999999999999999999999999999765432
Q ss_pred ccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 870 HLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 870 ~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.. ......||+.|+|||++. +.++|+||+||++|||+
T Consensus 151 ~~--------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~ 191 (280)
T cd05608 151 QS--------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMI 191 (280)
T ss_pred Cc--------cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHH
Confidence 11 112357999999999985 47899999999999874
No 126
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.1e-31 Score=261.78 Aligned_cols=190 Identities=26% Similarity=0.315 Sum_probs=163.8
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
..++|...+++|+|.||+|..|+.+.+++.||+|+++++- +.....-..|-++++..+||.+..+... |+..
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYs-----FQt~ 240 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYS-----FQTQ 240 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhh-----hccC
Confidence 3467888999999999999999999999999999997543 2333456778999999999999877644 7777
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
+..++||||..||.|.-.+.+. +.+++.....+..+|+.||.|||++ +||.||+|.+|.|+|.||++||+|
T Consensus 241 drlCFVMeyanGGeLf~HLsre------r~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitD 311 (516)
T KOG0690|consen 241 DRLCFVMEYANGGELFFHLSRE------RVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITD 311 (516)
T ss_pred ceEEEEEEEccCceEeeehhhh------hcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeee
Confidence 8999999999999999888764 4688888899999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~f 914 (914)
||+++.-.. .......+||||.|.|||++ +|.++|.|.+|++.|||.
T Consensus 312 FGLCKE~I~--------~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMm 362 (516)
T KOG0690|consen 312 FGLCKEEIK--------YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMM 362 (516)
T ss_pred cccchhccc--------ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHH
Confidence 999985221 12234468999999999999 689999999999999983
No 127
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.96 E-value=1.1e-29 Score=280.46 Aligned_cols=180 Identities=26% Similarity=0.295 Sum_probs=148.9
Q ss_pred ccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhc---CCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNI---RHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 713 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
||+|+||+||+|++..+++.||||++.... .........|..++.+. +||+|+++++++. .....++||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~-----~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQ-----TDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEe-----cCCeEEEEE
Confidence 799999999999999999999999996432 22233455677777665 6999999998853 345789999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~l~~~------~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 76 DYMSGGELFWHLQKE------GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred cCCCCChHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 999999999988754 3588999999999999999999999 9999999999999999999999999998753
Q ss_pred cccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
.... ......+||+.|||||++. +.++|+||+||++|+|.
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~ell 191 (330)
T cd05586 147 LTDN--------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMC 191 (330)
T ss_pred CCCC--------CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEec
Confidence 2211 1122457999999999984 47799999999999984
No 128
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.96 E-value=3.8e-30 Score=286.73 Aligned_cols=184 Identities=29% Similarity=0.421 Sum_probs=153.3
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
++|+..+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++|+||+++++++ +..+..+
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 148 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF-----DHNGEIQ 148 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe-----ccCCeEE
Confidence 46777889999999999999999899999999986443 23346789999999999999999999985 3445789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++|+|.+.. ...+..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 149 lv~e~~~~~~L~~~~----------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~ 215 (353)
T PLN00034 149 VLLEFMDGGSLEGTH----------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVS 215 (353)
T ss_pred EEEecCCCCcccccc----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccc
Confidence 999999999986532 345667788999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~~f 914 (914)
+.+..... ......||..|+|||++. +.++|||||||++|||+
T Consensus 216 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~ 267 (353)
T PLN00034 216 RILAQTMD--------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFY 267 (353)
T ss_pred eecccccc--------cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHH
Confidence 86542210 112347999999999873 24799999999999874
No 129
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96 E-value=8.9e-30 Score=281.07 Aligned_cols=188 Identities=22% Similarity=0.341 Sum_probs=160.6
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++... +..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC-----CEE
Confidence 368999999999999999999999999999999987542 23346789999999999999999999996543 478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++|+|.+++... ..+++..+..++.|++.|+.|||+.. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~ 150 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKA------GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGV 150 (333)
T ss_pred EEEEecCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCc
Confidence 9999999999999999754 35788889999999999999999742 699999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++.+.... .....||+.|+|||++. +.++|+||+||++|+|+
T Consensus 151 ~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~ 196 (333)
T cd06650 151 SGQLIDSM----------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 196 (333)
T ss_pred chhhhhhc----------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHH
Confidence 97653211 11346999999999985 47899999999999873
No 130
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.96 E-value=4e-30 Score=296.89 Aligned_cols=201 Identities=24% Similarity=0.296 Sum_probs=164.4
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC---C
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDF---E 777 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~ 777 (914)
...+|.+.+.||+|+||+||+|++..+++.||||+++... ......+.+|+.++..++|+||+++++.+...+. .
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 3468999999999999999999999999999999997543 3344578899999999999999998876543221 1
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEE
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHV 857 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki 857 (914)
.....++||||+++|+|.++++.... ....+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.+||
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~--~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAK--TNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEE
Confidence 11246899999999999999975432 224688999999999999999999999 9999999999999999999999
Q ss_pred ecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+|||+++.+...... ......+||+.|||||++. +.++|||||||++|||+
T Consensus 185 ~DFGls~~~~~~~~~------~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLl 239 (496)
T PTZ00283 185 GDFGFSKMYAATVSD------DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELL 239 (496)
T ss_pred EecccCeeccccccc------cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 999999876432111 1122457999999999984 57899999999999874
No 131
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-30 Score=286.57 Aligned_cols=202 Identities=28% Similarity=0.503 Sum_probs=165.3
Q ss_pred CccCHHHHHHHhhcc---------cccCcccCCccEEEEEEEECCCc---EEEEEEEeecc-CCcchHHHHHHHHHHHhc
Q 042766 693 PMVSYAELSKATSEF---------SSSNMIGQGRFGTVYKGILGDDE---MVVAVKVINLK-QKGASKSFVSECEALRNI 759 (914)
Q Consensus 693 ~~~~~~~~~~~~~~~---------~~~~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l 759 (914)
...+++|.-.+..+| .+.++||.|.||+||+|+.+..+ ..||||.++.. .++...+|..|+.||.++
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 345566655544443 46789999999999999997544 57999999754 345667999999999999
Q ss_pred CCCCcceEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEe
Q 042766 760 RHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVH 839 (914)
Q Consensus 760 ~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivH 839 (914)
+||||+++.|+.... ...+||.|||++|+|+.|++.+. ..+++.+...+.++||.|++||-+. ++||
T Consensus 688 dHPNIIrLEGVVTks-----~PvMIiTEyMENGsLDsFLR~~D-----GqftviQLVgMLrGIAsGMkYLsdm---~YVH 754 (996)
T KOG0196|consen 688 DHPNIIRLEGVVTKS-----KPVMIITEYMENGSLDSFLRQND-----GQFTVIQLVGMLRGIASGMKYLSDM---NYVH 754 (996)
T ss_pred CCCcEEEEEEEEecC-----ceeEEEhhhhhCCcHHHHHhhcC-----CceEeehHHHHHHHHHHHhHHHhhc---Cchh
Confidence 999999999996543 37899999999999999999876 3588899999999999999999998 9999
Q ss_pred cCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccc
Q 042766 840 GDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVH 912 (914)
Q Consensus 840 rDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~ 912 (914)
|||.++|||++.+..+||+|||++|.+.++. .... ...+-.=..+|.|||.+ ++.++|+||||+++-|
T Consensus 755 RDLAARNILVNsnLvCKVsDFGLSRvledd~-~~~y----tt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWE 826 (996)
T KOG0196|consen 755 RDLAARNILVNSNLVCKVSDFGLSRVLEDDP-EAAY----TTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWE 826 (996)
T ss_pred hhhhhhheeeccceEEEeccccceeecccCC-Cccc----cccCCccceeecChhHhhhcccCchhhccccceEEEE
Confidence 9999999999999999999999999886543 1111 11111224679999999 5799999999998765
No 132
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.96 E-value=5.6e-30 Score=292.29 Aligned_cols=192 Identities=24% Similarity=0.364 Sum_probs=155.1
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCC---CCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFE---GVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---~~~ 780 (914)
..+|++.+.||+|+||.||+|++..+++.||||++.... ....+|+.++++++||||+++++++....+. ...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 457999999999999999999999899999999885322 2345799999999999999999886543322 223
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC-cEEEec
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM-VAHVGD 859 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~-~~ki~D 859 (914)
+.++||||++ +++.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|
T Consensus 141 ~l~lvmE~~~-~~l~~~~~~~~~--~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 141 FLNVVMEFIP-QTVHKYMKHYAR--NNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred EEEEEEecCC-ccHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeec
Confidence 5779999997 478777754211 125688999999999999999999999 999999999999999664 799999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
||+|+.+.... ......||+.|||||++. +.++||||+||++|||+
T Consensus 215 FGla~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell 265 (440)
T PTZ00036 215 FGSAKNLLAGQ---------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMI 265 (440)
T ss_pred cccchhccCCC---------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHH
Confidence 99998654221 112357899999999974 46799999999999874
No 133
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.96 E-value=2.4e-30 Score=276.10 Aligned_cols=191 Identities=25% Similarity=0.414 Sum_probs=161.2
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc-chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG-ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+...+.++||+|-||+|..|... .+..||||.++..... ...+|.+|+++|.+++|||||+++|+|...+ ..+
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De-----Pic 611 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD-----PLC 611 (807)
T ss_pred hheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC-----chH
Confidence 45677899999999999999886 4689999999866543 4589999999999999999999999997655 689
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+|+|||++|+|.+|+.++.. .........+|+.||+.|++||.+. ++||||+.+.|+|+|.++++||+|||++
T Consensus 612 mI~EYmEnGDLnqFl~ahea----pt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgms 684 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHEL----PTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMS 684 (807)
T ss_pred HHHHHHhcCcHHHHHHhccC----cccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccc
Confidence 99999999999999987743 2234556778999999999999998 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~f 914 (914)
|.+-..++..... ..+=..+|||||.+ ++.++|+|+||.|++|||
T Consensus 685 R~lysg~yy~vqg------r~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~ 733 (807)
T KOG1094|consen 685 RNLYSGDYYRVQG------RAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVF 733 (807)
T ss_pred cccccCCceeeec------ceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHH
Confidence 9665443322111 23456789999999 579999999999999986
No 134
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=267.34 Aligned_cols=181 Identities=27% Similarity=0.394 Sum_probs=152.8
Q ss_pred cCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEe
Q 042766 710 SNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFE 787 (914)
Q Consensus 710 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 787 (914)
.+++|+|.||+||-|+++.+|+.||||++++.. ......+..|+.+|+++.||.||.+..+ ++..+..++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M-----~ET~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECM-----FETPERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEe-----ecCCceEEEEeh
Confidence 478999999999999999999999999997432 3445788999999999999999999888 666779999999
Q ss_pred cccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC---CcEEEecccccc
Q 042766 788 YMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGDFGLAK 864 (914)
Q Consensus 788 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~---~~~ki~DFGla~ 864 (914)
-+.| +..++|-.. +..++++.....++.||+.||.|||.+ +|||.||||||||+... -.+||+|||.||
T Consensus 644 Kl~G-DMLEMILSs----EkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 644 KLHG-DMLEMILSS----EKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred hhcc-hHHHHHHHh----hcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeecccccee
Confidence 9954 655555432 225788888889999999999999999 99999999999999643 479999999999
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccc
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVH 912 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~ 912 (914)
++.+.. .....+|||.|.|||+++ ...-|+||.|+++|-
T Consensus 716 iIgEks---------FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYV 758 (888)
T KOG4236|consen 716 IIGEKS---------FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYV 758 (888)
T ss_pred ecchhh---------hhhhhcCCccccCHHHHhhccccccccceeeeEEEEE
Confidence 886532 223578999999999995 488899999999873
No 135
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.96 E-value=8.6e-30 Score=272.34 Aligned_cols=190 Identities=23% Similarity=0.376 Sum_probs=156.9
Q ss_pred hhcccccCcccCCccEEEEEEEEC---CCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILG---DDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
..+|++.+.||+|+||.||+|++. ..+..||+|.++... ....+.+.+|+.++++++||||+++++++.. .
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~ 78 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR-----G 78 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec-----C
Confidence 357889999999999999999875 456789999987543 2334678999999999999999999998643 3
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
+..++||||+++|+|.+++.... ..+++.+++.++.|++.|++|||++ +++||||||+||+++.++.+|++|
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~d 150 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKHE-----GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISG 150 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECC
Confidence 47899999999999999997643 3688999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
||.+........ .......+|..|+|||++. +.++|||||||+++|+
T Consensus 151 fg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 201 (266)
T cd05064 151 FRRLQEDKSEAI-------YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEV 201 (266)
T ss_pred Ccccccccccch-------hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHH
Confidence 998765322110 0111234678899999884 5889999999999985
No 136
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.96 E-value=9.8e-30 Score=285.12 Aligned_cols=197 Identities=23% Similarity=0.385 Sum_probs=157.9
Q ss_pred hhcccccCcccCCccEEEEEEEE-----CCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGIL-----GDDEMVVAVKVINLKQ-KGASKSFVSECEALRNI-RHRNLIKIITICSSTDF 776 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 776 (914)
.++|++.+.||+|+||.||+|++ .+++..||||+++... ....+.+.+|+++++.+ +||||++++++|..
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~--- 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV--- 110 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc---
Confidence 35789999999999999999975 3456789999986432 33446788999999999 89999999998644
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCc----------------------------------------------------
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQ---------------------------------------------------- 804 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------------------- 804 (914)
.+..++||||+++|+|.+++......
T Consensus 111 --~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 111 --GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred --CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 34789999999999999999753210
Q ss_pred -----------------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccc
Q 042766 805 -----------------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867 (914)
Q Consensus 805 -----------------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~ 867 (914)
.....+++..+.+++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceecc
Confidence 0112578889999999999999999998 99999999999999999999999999998654
Q ss_pred ccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 868 NHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
...... ......++..|||||++. +.++|+|||||+++||+
T Consensus 266 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ell 310 (375)
T cd05104 266 NDSNYV------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIF 310 (375)
T ss_pred Cccccc------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHH
Confidence 322110 011234567899999984 58899999999999874
No 137
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.96 E-value=1.7e-29 Score=273.61 Aligned_cols=192 Identities=26% Similarity=0.427 Sum_probs=158.1
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhc---CCCCcceEEeEeecCCCCCCc
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNI---RHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~~~ 780 (914)
+|++.+.||+|+||+||+|++..+++.||+|.++... ......+.+|+++++.+ +||||+++++++.....+...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999999999999999987432 22334566788877665 799999999987654444455
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||++ +++.+++..... ..+++.++..++.|++.|++|+|+. +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPP----PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcc
Confidence 7899999997 589998875432 3588999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++...... ......||+.|+|||++. +.++|+||+||++|+|+
T Consensus 153 g~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~ 201 (288)
T cd07863 153 GLARIYSCQM---------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 201 (288)
T ss_pred CccccccCcc---------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHH
Confidence 9998654221 111346899999999984 47899999999999874
No 138
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.96 E-value=1.1e-29 Score=278.70 Aligned_cols=182 Identities=23% Similarity=0.293 Sum_probs=153.5
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||+||+|++..+++.||||+++.. .......+.+|.++++.+ +||||+++++++. ..+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~-----~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQ-----TKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE-----cCCEEEEEE
Confidence 4699999999999999999999999999743 233445677899999888 6999999999854 345789999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~------~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 146 (318)
T cd05570 76 EYVNGGDLMFHIQRS------GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEG 146 (318)
T ss_pred cCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeec
Confidence 999999999988754 3688999999999999999999999 9999999999999999999999999998743
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.... ......+||+.|||||++. +.++|+||+||++|+|+
T Consensus 147 ~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~ 190 (318)
T cd05570 147 ILGG--------VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEML 190 (318)
T ss_pred CcCC--------CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHh
Confidence 2111 1112357999999999984 47899999999999874
No 139
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.96 E-value=7e-30 Score=285.96 Aligned_cols=198 Identities=23% Similarity=0.376 Sum_probs=157.4
Q ss_pred HhhcccccCcccCCccEEEEEEEECC-----CcEEEEEEEeeccC-CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGD-----DEMVVAVKVINLKQ-KGASKSFVSECEALRNI-RHRNLIKIITICSSTD 775 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 775 (914)
..++|++.+.||+|+||.||+|++.. +++.||+|+++... ....+.+.+|+++++++ +||||++++++|..
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~-- 113 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH-- 113 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC--
Confidence 34579999999999999999998643 33579999997443 23345788999999999 89999999998643
Q ss_pred CCCCceEeEEEecccCCCHHHHHhccCCc---------------------------------------------------
Q 042766 776 FEGVDFKALVFEYMENGSLEDWLHQSNDQ--------------------------------------------------- 804 (914)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------- 804 (914)
.+..++||||+++|+|.+++......
T Consensus 114 ---~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 114 ---GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred ---CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 34789999999999999998643210
Q ss_pred -------------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccccc
Q 042766 805 -------------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHL 871 (914)
Q Consensus 805 -------------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~ 871 (914)
....++++.++++++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~ 267 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN 267 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc
Confidence 0113578889999999999999999999 999999999999999999999999999986533211
Q ss_pred ccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 872 DIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 872 ~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
. .......+++.|||||++. +.++|+|||||++|||+
T Consensus 268 ~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ell 308 (374)
T cd05106 268 Y------VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 308 (374)
T ss_pred e------eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHH
Confidence 0 0111223567899999884 58999999999999874
No 140
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=1.3e-29 Score=275.34 Aligned_cols=188 Identities=26% Similarity=0.359 Sum_probs=163.3
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
....|.+...||+|.|++|..|++..++..||||.++...- .....+.+|+++|..++|||||+++++. +...
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~-----~t~~ 128 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVI-----ETEA 128 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeee-----eecc
Confidence 34678999999999999999999999999999999975542 2334588999999999999999999984 4445
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..|+||||+.+|.+++++.+++ ...+..+..++.|+.+|++|||++ .|||||||++|||++.+.++||+||
T Consensus 129 ~lylV~eya~~ge~~~yl~~~g------r~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDf 199 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKHG------RMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADF 199 (596)
T ss_pred eeEEEEEeccCchhHHHHHhcc------cchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeecc
Confidence 8999999999999999998875 344577888999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCccccccccc
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~ 913 (914)
|++.++.... .....+|++.|.|||+++ +..+|+||+|+++|.+
T Consensus 200 gfS~~~~~~~---------~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~L 248 (596)
T KOG0586|consen 200 GFSTFFDYGL---------MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYAL 248 (596)
T ss_pred ccceeecccc---------cccccCCCCCccChHhhcCcccCCcceehhhhhhhheee
Confidence 9999875332 123578999999999996 4899999999998864
No 141
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.96 E-value=2.1e-29 Score=270.92 Aligned_cols=181 Identities=24% Similarity=0.343 Sum_probs=152.2
Q ss_pred ccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecc
Q 042766 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYM 789 (914)
Q Consensus 713 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 789 (914)
||+|+||.||+|+.+.+++.||+|.+.... ....+.+..|++++++++||||+++++++. .....++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~-----~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFE-----SKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEe-----cCCeEEEEEecC
Confidence 699999999999999999999999986432 223345677999999999999999998853 345789999999
Q ss_pred cCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccc
Q 042766 790 ENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869 (914)
Q Consensus 790 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~ 869 (914)
+|++|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 76 ~g~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 76 NGGDLKYHIYNVGE----RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred CCCCHHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 99999998865432 4588899999999999999999998 9999999999999999999999999999765432
Q ss_pred ccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 870 HLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 870 ~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
. ......||+.|+|||++. +.++|+||+||++|||+
T Consensus 149 ~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~ 188 (277)
T cd05607 149 K---------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMV 188 (277)
T ss_pred c---------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHH
Confidence 1 111246899999999984 57899999999999874
No 142
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.96 E-value=1.7e-29 Score=277.23 Aligned_cols=189 Identities=25% Similarity=0.422 Sum_probs=156.3
Q ss_pred hcccccCcccCCccEEEEEEEECCCcE----EEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEM----VVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.+|+..+.||+|+||.||+|++..+++ .||+|+++... ....+++.+|+.+++.++||||++++++|...
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~----- 81 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 81 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-----
Confidence 579999999999999999999865554 48999986432 33456888999999999999999999997532
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
..++|+||+++|+|.+++.... ..+++..+++++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~D 152 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVREHK-----DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITD 152 (316)
T ss_pred -CceeeeecCCCCCHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcc
Confidence 3578999999999999998653 3578889999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
||+++......... ......++..|||||++. +.++|+|||||++||+
T Consensus 153 fG~a~~~~~~~~~~------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el 204 (316)
T cd05108 153 FGLAKLLGADEKEY------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 204 (316)
T ss_pred ccccccccCCCcce------eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHH
Confidence 99998764322110 111233577899999984 4789999999999986
No 143
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.8e-30 Score=298.68 Aligned_cols=196 Identities=28% Similarity=0.462 Sum_probs=161.4
Q ss_pred hcccccCcccCCccEEEEEEEECCC-----cEEEEEEEeecc-CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDD-----EMVVAVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
..-+..+.||+|+||.||+|...+- ...||||.++.. +.+...+|.+|..+|++++|||||+++|+|...
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~---- 767 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS---- 767 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC----
Confidence 3455678999999999999998642 345999998644 455678999999999999999999999998653
Q ss_pred CceEeEEEecccCCCHHHHHhccCCc-ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEE
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQ-VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHV 857 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki 857 (914)
...+|++|||+||+|..|+++.+.. .....++..+.+.++.|||+|+.||+++ ++|||||..+|+|++....|||
T Consensus 768 -~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKI 843 (1025)
T KOG1095|consen 768 -GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKI 843 (1025)
T ss_pred -CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEE
Confidence 3678999999999999999876332 2246788999999999999999999999 9999999999999999999999
Q ss_pred ecccccccccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccccC
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~f 914 (914)
+|||+|+.+.+.++...... ..=...|||||.+ ++.++||||||+++.|.|
T Consensus 844 aDFGlArDiy~~~yyr~~~~------a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEif 898 (1025)
T KOG1095|consen 844 ADFGLARDIYDKDYYRKHGE------AMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIF 898 (1025)
T ss_pred cccchhHhhhhchheeccCc------cccceecCCHHHHhhcccccccchhhhHHHHHHHH
Confidence 99999995544433222211 1223579999999 469999999999999976
No 144
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.96 E-value=1.7e-29 Score=283.66 Aligned_cols=192 Identities=23% Similarity=0.293 Sum_probs=158.5
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|+..+.||+|+||.||+|++..+++.||||++... +....+++.+|+++++.++||||+++++++...........+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478889999999999999999889999999998643 223446788999999999999999999987554332333689
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||++ ++|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 81 lv~e~~~-~~l~~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP------QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred EEeeccc-cCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccce
Confidence 9999996 6888887653 4688999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+....... .......||+.|+|||++. +.++|+||+||+++||+
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~ 199 (372)
T cd07853 151 RVEEPDES-------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELL 199 (372)
T ss_pred eecccCcc-------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHH
Confidence 86432211 1112346899999999984 46789999999999874
No 145
>PHA02988 hypothetical protein; Provisional
Probab=99.96 E-value=3e-29 Score=270.31 Aligned_cols=183 Identities=21% Similarity=0.275 Sum_probs=153.2
Q ss_pred cCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcc---hHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 710 SNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA---SKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 710 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
...||+|++|.||+|++ +++.||||+++...... .+.+.+|++++++++||||++++|++.... +.....++||
T Consensus 25 ~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~-~~~~~~~lv~ 101 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV-DDLPRLSLIL 101 (283)
T ss_pred CeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc-cCCCceEEEE
Confidence 36799999999999998 57899999997543332 467889999999999999999999875421 2234678999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++... ..+++..+.+++.|++.|++|+|+.. +++||||||+||+++.++.+||+|||+++..
T Consensus 102 Ey~~~g~L~~~l~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~ 173 (283)
T PHA02988 102 EYCTRGYLREVLDKE------KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKIL 173 (283)
T ss_pred EeCCCCcHHHHHhhC------CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhh
Confidence 999999999999764 35788899999999999999999732 7889999999999999999999999999865
Q ss_pred cccccccccCCCCccccccCcccccccchhh------hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~~~~~~f 914 (914)
.... ....||+.|+|||++. +.++|||||||++|||+
T Consensus 174 ~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~ 216 (283)
T PHA02988 174 SSPP-----------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIF 216 (283)
T ss_pred cccc-----------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHH
Confidence 3211 1246899999999984 46999999999999874
No 146
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.96 E-value=2.5e-29 Score=269.00 Aligned_cols=188 Identities=23% Similarity=0.313 Sum_probs=161.5
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
++|++.+.||+|+||.||+|++..+++.||+|+++.........+.+|+.+++.++||||+++++++.. .+..++
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~-----~~~~~l 83 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLR-----RDKLWI 83 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEe-----CCEEEE
Confidence 478888999999999999999998999999999976655555678899999999999999999998543 347899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++++|.+++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 84 v~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~ 154 (267)
T cd06645 84 CMEFCGGGSLQDIYHVT------GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSA 154 (267)
T ss_pred EEeccCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeee
Confidence 99999999999998754 3588999999999999999999999 99999999999999999999999999987
Q ss_pred cccccccccccCCCCccccccCcccccccchhh-------hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~f 914 (914)
...... .......||+.|+|||++. +.++|+||+||++++|+
T Consensus 155 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~ 203 (267)
T cd06645 155 QITATI--------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELA 203 (267)
T ss_pred EccCcc--------cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHh
Confidence 653211 1112356999999999973 36899999999999874
No 147
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.96 E-value=4.1e-29 Score=267.36 Aligned_cols=188 Identities=23% Similarity=0.312 Sum_probs=161.4
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
++|++.+.||+|+||.||+|++..+++.||+|++..........+.+|+.++++++||||+++++++.. ....++
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~-----~~~~~i 83 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLS-----REKLWI 83 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEe-----CCEEEE
Confidence 579999999999999999999998999999999976555555678899999999999999999998643 347899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++++|.+++... ..+++.++..++.|++.|++|||+. +|+|||+||+||+++.++.+||+|||+++
T Consensus 84 v~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~ 154 (267)
T cd06646 84 CMEYCGGGSLQDIYHVT------GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAA 154 (267)
T ss_pred EEeCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccce
Confidence 99999999999998754 3578899999999999999999998 99999999999999999999999999998
Q ss_pred cccccccccccCCCCccccccCcccccccchhh-------hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~f 914 (914)
...... .......|++.|+|||.+. +.++|+||+||+++||+
T Consensus 155 ~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~ 203 (267)
T cd06646 155 KITATI--------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELA 203 (267)
T ss_pred eecccc--------cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHH
Confidence 653211 1112346899999999873 36799999999999873
No 148
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.96 E-value=4.4e-29 Score=274.25 Aligned_cols=191 Identities=24% Similarity=0.313 Sum_probs=150.8
Q ss_pred cCcccCCccEEEEEEEEC--CCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEe
Q 042766 710 SNMIGQGRFGTVYKGILG--DDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFE 787 (914)
Q Consensus 710 ~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 787 (914)
.++||+|+||+||+|++. .+++.||+|.+... .....+.+|++++++++||||+++++++... .....++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSH---ADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecC---CCcEEEEEEe
Confidence 468999999999999975 36689999998533 2345678999999999999999999986532 2346899999
Q ss_pred cccCCCHHHHHhccCCc---ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee----cCCCcEEEecc
Q 042766 788 YMENGSLEDWLHQSNDQ---VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL----DYDMVAHVGDF 860 (914)
Q Consensus 788 ~~~~gsL~~~l~~~~~~---~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl----~~~~~~ki~DF 860 (914)
|++ +++.+++...... .....+++..+..++.|++.||+|||++ +|+||||||+|||+ +.++.+||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 995 5898887643211 1123588999999999999999999999 99999999999999 45679999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+|+.+...... ........||+.|||||++. +.++|+||+||++++|+
T Consensus 157 G~a~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~ 210 (317)
T cd07868 157 GFARLFNSPLKP-----LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 210 (317)
T ss_pred CceeccCCCCcc-----ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHH
Confidence 999876432211 11122457999999999984 46799999999999874
No 149
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=3.3e-29 Score=279.95 Aligned_cols=191 Identities=24% Similarity=0.297 Sum_probs=157.5
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCC-CCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTD-FEGV 779 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~ 779 (914)
..++|++.+.||+|+||.||+|++..+++.||+|++... .......+.+|+.+++.++||||+++++++.... .+..
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457899999999999999999999999999999998643 2334567889999999999999999999875332 1223
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++ ++.+.+. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~--------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~D 166 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH--------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 166 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh--------ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEec
Confidence 457999999965 6766664 2467788899999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++...... ......||+.|+|||++. +.++|+||+||++|+|+
T Consensus 167 fg~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 216 (359)
T cd07876 167 FGLARTACTNF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELV 216 (359)
T ss_pred CCCccccccCc---------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHH
Confidence 99997543211 112356899999999984 47899999999999874
No 150
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=3e-29 Score=284.81 Aligned_cols=184 Identities=27% Similarity=0.305 Sum_probs=155.6
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
...|.+.+.||+|+||.||+|++..+++.||||... ...+.+|++++++++|+|||++++++... +..+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~-----~~~~ 236 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVG-----GLTC 236 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEEC-----CEEE
Confidence 346899999999999999999999999999999642 23457899999999999999999986543 4789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+. ++|.+++.... ..+++.+++.|+.|++.||.|||++ +||||||||+|||++.++.+||+|||++
T Consensus 237 lv~e~~~-~~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla 307 (461)
T PHA03211 237 LVLPKYR-SDLYTYLGARL-----RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAA 307 (461)
T ss_pred EEEEccC-CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCc
Confidence 9999994 79998886543 3689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
+....... ........||+.|||||++. +.++|||||||++|||
T Consensus 308 ~~~~~~~~------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El 355 (461)
T PHA03211 308 CFARGSWS------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEA 355 (461)
T ss_pred eecccccc------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHH
Confidence 86543211 01122457999999999984 5789999999999986
No 151
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.96 E-value=3e-29 Score=274.37 Aligned_cols=188 Identities=24% Similarity=0.398 Sum_probs=157.7
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
++|...+.||+|+||.||+|++..+++.||+|.++... ......+.+|++++++++||||+++++++.. .+..+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHT-----DKSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEee-----CCeEE
Confidence 56889999999999999999999899999999997443 3334567899999999999999999998643 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++ ++.+++...+ ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~~-~l~~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 151 (309)
T cd07872 81 LVFEYLDK-DLKQYMDDCG-----NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLA 151 (309)
T ss_pred EEEeCCCC-CHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccc
Confidence 99999974 8988886543 3578889999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+....... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 152 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~ 199 (309)
T cd07872 152 RAKSVPTK--------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMA 199 (309)
T ss_pred eecCCCcc--------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 75432111 111246899999999884 46899999999999874
No 152
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.96 E-value=2.6e-29 Score=297.51 Aligned_cols=199 Identities=22% Similarity=0.361 Sum_probs=161.8
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
....+|.+.+.||+|+||+||+|++..++..||+|++.... ......+.+|+.++++++|||||++++++... ..
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de---~~ 86 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK---AN 86 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec---CC
Confidence 34568999999999999999999999999999999987442 23456789999999999999999999986532 23
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCC----CCcEecCCCCCCeeecCC---
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQ----PPMVHGDLKPSNVLLDYD--- 852 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~----~~ivHrDlkp~NILl~~~--- 852 (914)
...|+||||+++|+|.+++..... ....+++..++.|+.||+.||+|||+... .+||||||||+|||++.+
T Consensus 87 ~~lyIVMEY~~gGSL~~lL~k~~~--~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~ 164 (1021)
T PTZ00266 87 QKLYILMEFCDAGDLSRNIQKCYK--MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH 164 (1021)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence 468999999999999999875321 12468999999999999999999998521 259999999999999642
Q ss_pred --------------CcEEEecccccccccccccccccCCCCccccccCcccccccchhh------hhhcccCcccccccc
Q 042766 853 --------------MVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSCTNVH 912 (914)
Q Consensus 853 --------------~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~~~~~ 912 (914)
+.+||+|||+++.+.... ......||+.|||||++. +.++|||||||++||
T Consensus 165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s---------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYE 235 (1021)
T PTZ00266 165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIES---------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYE 235 (1021)
T ss_pred cccccccccccCCCCceEEccCCccccccccc---------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHH
Confidence 358999999998653221 112357999999999983 468999999999998
Q ss_pred cC
Q 042766 913 HF 914 (914)
Q Consensus 913 ~f 914 (914)
|+
T Consensus 236 LL 237 (1021)
T PTZ00266 236 LC 237 (1021)
T ss_pred HH
Confidence 74
No 153
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.96 E-value=5.5e-29 Score=268.93 Aligned_cols=194 Identities=27% Similarity=0.411 Sum_probs=159.5
Q ss_pred hcccccCcccCCccEEEEEEEE----CCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 705 SEFSSSNMIGQGRFGTVYKGIL----GDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.+|++.+.||+|+||.||+|+. ..+++.||+|++........+.+.+|++++++++||||+++++++... +..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC---CCC
Confidence 4788899999999999999984 356789999998765555567889999999999999999999986532 234
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++++|.+++...+ ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~df 152 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHR-----ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDF 152 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcC-----cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCC
Confidence 5789999999999999997543 3588999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++.......... ......++..|+|||+.. +.++|+||+||+++|||
T Consensus 153 g~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 205 (284)
T cd05081 153 GLTKVLPQDKEYYK-----VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 205 (284)
T ss_pred cccccccCCCccee-----ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHh
Confidence 99987643221100 011123455699999984 58899999999999885
No 154
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.96 E-value=5.9e-29 Score=268.56 Aligned_cols=187 Identities=24% Similarity=0.351 Sum_probs=157.4
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
|+..+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.++++++|++|+++++.+.. .+..+
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-----~~~~~ 76 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET-----KDALC 76 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec-----CCEEE
Confidence 667789999999999999999999999999986432 2223467789999999999999999988543 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++...+. ..+++.++..++.|++.|+.|||+. +|+||||||+||+++.++.++|+|||++
T Consensus 77 lv~e~~~g~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~ 149 (285)
T cd05630 77 LVLTLMNGGDLKFHIYHMGE----AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLA 149 (285)
T ss_pred EEEEecCCCcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccce
Confidence 99999999999998865331 4688999999999999999999998 9999999999999999999999999998
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
....... ......||+.|||||++. +.++|+||+||++|+|+
T Consensus 150 ~~~~~~~---------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~ 195 (285)
T cd05630 150 VHVPEGQ---------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI 195 (285)
T ss_pred eecCCCc---------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHH
Confidence 7543211 111346999999999984 57899999999999874
No 155
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.96 E-value=3.7e-29 Score=281.06 Aligned_cols=198 Identities=24% Similarity=0.390 Sum_probs=158.5
Q ss_pred HhhcccccCcccCCccEEEEEEEECC-----CcEEEEEEEeeccCC-cchHHHHHHHHHHHhcC-CCCcceEEeEeecCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGD-----DEMVVAVKVINLKQK-GASKSFVSECEALRNIR-HRNLIKIITICSSTD 775 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 775 (914)
..++|.+.+.||+|+||.||+|++.. ++..||||+++.... ...+.+.+|++++++++ ||||++++++|..
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~-- 112 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK-- 112 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc--
Confidence 34688899999999999999998743 245799999964432 33467899999999996 9999999999643
Q ss_pred CCCCceEeEEEecccCCCHHHHHhccCCc---------------------------------------------------
Q 042766 776 FEGVDFKALVFEYMENGSLEDWLHQSNDQ--------------------------------------------------- 804 (914)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------- 804 (914)
....++||||+++|+|.+++...+..
T Consensus 113 ---~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 113 ---SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred ---CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 34789999999999999998653210
Q ss_pred ---------------------------------------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCC
Q 042766 805 ---------------------------------------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPS 845 (914)
Q Consensus 805 ---------------------------------------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~ 845 (914)
.....+++.++..++.|+++|++|||+. +|+||||||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~ 266 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAAR 266 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChH
Confidence 0012478888899999999999999998 9999999999
Q ss_pred CeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 846 NVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 846 NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++.++.+||+|||+++........ .......|++.|||||++. +.++|||||||+++||+
T Consensus 267 Nill~~~~~~kL~DfGla~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 333 (400)
T cd05105 267 NVLLAQGKIVKICDFGLARDIMHDSNY------VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIF 333 (400)
T ss_pred hEEEeCCCEEEEEeCCcceeccccccc------cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHH
Confidence 999999999999999999865432111 1112345788999999984 57899999999999873
No 156
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=3.5e-29 Score=279.03 Aligned_cols=184 Identities=21% Similarity=0.293 Sum_probs=155.0
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
....+|++.+.||+|+||.||+|++..+++.||+|+... .....|+.++++++||||+++++++.. ...
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~ 131 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLVS-----GAI 131 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEEe-----CCe
Confidence 344579999999999999999999998999999997532 123569999999999999999998654 347
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+. ++|.+++.... ..+++.+++.|+.||+.||+|||++ +||||||||+||+++.++.+||+|||
T Consensus 132 ~~lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG 202 (357)
T PHA03209 132 TCMVLPHYS-SDLYTYLTKRS-----RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLG 202 (357)
T ss_pred eEEEEEccC-CcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCc
Confidence 899999994 68999886543 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++..... .......||+.|+|||++. +.++|+|||||++|||+
T Consensus 203 ~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell 250 (357)
T PHA03209 203 AAQFPVVA---------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEML 250 (357)
T ss_pred cccccccC---------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHH
Confidence 99753211 1122457999999999984 58899999999999873
No 157
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.96 E-value=4.3e-29 Score=277.43 Aligned_cols=191 Identities=24% Similarity=0.327 Sum_probs=158.9
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC-CC
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDF-EG 778 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~ 778 (914)
...++|+..+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++..... ..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 34578999999999999999999999899999999986432 2234567899999999999999999987643221 22
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
....+++||++ +++|.++++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~ 160 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC-------QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRIL 160 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEc
Confidence 23578999998 7899988753 3588999999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|||+++..... .....||+.|+|||++. +.++||||+||++|+|+
T Consensus 161 Dfg~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~ 210 (343)
T cd07878 161 DFGLARQADDE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 210 (343)
T ss_pred CCccceecCCC-----------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHH
Confidence 99999864321 12357999999999984 46899999999999873
No 158
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.96 E-value=3.9e-29 Score=276.18 Aligned_cols=198 Identities=23% Similarity=0.362 Sum_probs=157.9
Q ss_pred hhcccccCcccCCccEEEEEEEECC-----CcEEEEEEEeeccC-CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGD-----DEMVVAVKVINLKQ-KGASKSFVSECEALRNI-RHRNLIKIITICSSTDF 776 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 776 (914)
.++|++.+.||+|+||.||+|++.+ +++.||+|+++... ....+.+.+|+++++++ +||||++++++|...
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~-- 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP-- 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC--
Confidence 3579999999999999999997543 45789999986432 22345678899999999 799999999987543
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCc----------------------------------------------------
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQ---------------------------------------------------- 804 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------------------- 804 (914)
....++||||+++++|.+++......
T Consensus 84 --~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 84 --GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred --CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 24678999999999999998643210
Q ss_pred ---ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccccccccccccCCCCcc
Q 042766 805 ---VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSS 881 (914)
Q Consensus 805 ---~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~ 881 (914)
.....+++..+.+++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+++.+....... ..
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~------~~ 232 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV------RK 232 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchh------hc
Confidence 0013688999999999999999999999 99999999999999999999999999998754322111 11
Q ss_pred ccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 882 IGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 882 ~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
....++..|||||++. +.++|+||+||+++||+
T Consensus 233 ~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~ 269 (337)
T cd05054 233 GDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIF 269 (337)
T ss_pred cCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHH
Confidence 1235677899999884 47899999999999874
No 159
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.96 E-value=3.9e-29 Score=279.02 Aligned_cols=192 Identities=22% Similarity=0.284 Sum_probs=158.6
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCC-CCC
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTD-FEG 778 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~ 778 (914)
...++|+..+.||+|+||.||+|++..+++.||||++... .....+.+.+|+.+++.++||||+++++++.... .+.
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 3457899999999999999999999989999999998643 2334467889999999999999999999875432 223
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
....++||||+++ ++.+.+. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~--------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~ 161 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQ--------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 161 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHh--------hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEe
Confidence 3457999999965 6777664 2477888899999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||+++...... ......||+.|+|||++. +.++|+||+||++|+|+
T Consensus 162 Dfg~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 212 (355)
T cd07874 162 DFGLARTAGTSF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212 (355)
T ss_pred eCcccccCCCcc---------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHH
Confidence 999998643211 112357999999999984 47899999999999873
No 160
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=7.6e-29 Score=277.54 Aligned_cols=201 Identities=23% Similarity=0.333 Sum_probs=173.4
Q ss_pred HHHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCC
Q 042766 697 YAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSSTD 775 (914)
Q Consensus 697 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 775 (914)
++.....++-|++.++||.|.+|.||+++.+.+++.+|+|+...... ..+++..|.++++.. .|||++.++|++.-.+
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 33344455678999999999999999999999999999999875543 446778889998887 6999999999988766
Q ss_pred CCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcE
Q 042766 776 FEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVA 855 (914)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 855 (914)
--.++.+|+|||||.||+..|.++... ...+.|.....|++.++.|+.+||.+ .++|||+|-.|||++.++.|
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~----g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~V 162 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTK----GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEV 162 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhc----ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcE
Confidence 667788999999999999999998765 36789999999999999999999999 99999999999999999999
Q ss_pred EEecccccccccccccccccCCCCccccccCcccccccchh---------hhhhcccCccccccccc
Q 042766 856 HVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF---------FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 856 ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~---------~~~~~Di~s~g~~~~~~ 913 (914)
|+.|||.+..+.. +.......+|||.|||||++ ++.++|+||+|+|.+||
T Consensus 163 KLvDFGvSaQlds--------T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEl 221 (953)
T KOG0587|consen 163 KLVDFGVSAQLDS--------TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEM 221 (953)
T ss_pred EEeeeeeeeeeec--------ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehh
Confidence 9999999875532 23344567899999999998 46999999999999987
No 161
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=5.3e-29 Score=278.87 Aligned_cols=191 Identities=23% Similarity=0.284 Sum_probs=158.5
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCC-CCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTD-FEGV 779 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~ 779 (914)
..++|+..+.||+|+||.||+|++..+++.||||++... .....+.+.+|+.+++.++||||+++++++.... ++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 356899999999999999999999989999999998643 2334467889999999999999999998865332 2333
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++ ++.+++.. .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~D 169 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 169 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh--------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEe
Confidence 467999999964 78777742 467888899999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+|+...... ......||+.|+|||++. +.++|+||+||++|+|+
T Consensus 170 fG~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 219 (364)
T cd07875 170 FGLARTAGTSF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219 (364)
T ss_pred CCCccccCCCC---------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHH
Confidence 99998643211 112356999999999985 47899999999999874
No 162
>PTZ00284 protein kinase; Provisional
Probab=99.96 E-value=4e-29 Score=288.74 Aligned_cols=191 Identities=22% Similarity=0.346 Sum_probs=154.1
Q ss_pred HHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCC------CcceEEeEe
Q 042766 698 AELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHR------NLIKIITIC 771 (914)
Q Consensus 698 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~ 771 (914)
+++....++|++.+.||+|+||+||+|++..+++.||||+++... ...+....|++++++++|. +++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 344455678999999999999999999999899999999996322 2334566788888777554 578888876
Q ss_pred ecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCcEecCCCCCCeeec
Q 042766 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH-HCQPPMVHGDLKPSNVLLD 850 (914)
Q Consensus 772 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~-~~~~~ivHrDlkp~NILl~ 850 (914)
... ..+.++|||++ +++|.+++.+. ..+++.++..|+.||+.||+|||+ . +||||||||+|||++
T Consensus 201 ~~~----~~~~~iv~~~~-g~~l~~~l~~~------~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~ 266 (467)
T PTZ00284 201 QNE----TGHMCIVMPKY-GPCLLDWIMKH------GPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILME 266 (467)
T ss_pred EcC----CceEEEEEecc-CCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEe
Confidence 432 24689999998 78999988754 368899999999999999999997 5 899999999999998
Q ss_pred CCC----------------cEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccc
Q 042766 851 YDM----------------VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTN 910 (914)
Q Consensus 851 ~~~----------------~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~ 910 (914)
.++ .+||+|||.+..... .....+||+.|||||++. +.++|||||||++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-----------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 335 (467)
T PTZ00284 267 TSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH-----------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCII 335 (467)
T ss_pred cCCcccccccccccCCCCceEEECCCCccccCcc-----------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHH
Confidence 765 499999998763211 112467999999999985 5789999999999
Q ss_pred cccC
Q 042766 911 VHHF 914 (914)
Q Consensus 911 ~~~f 914 (914)
|||+
T Consensus 336 ~ell 339 (467)
T PTZ00284 336 YELY 339 (467)
T ss_pred HHHH
Confidence 9985
No 163
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.96 E-value=6.2e-29 Score=267.97 Aligned_cols=197 Identities=29% Similarity=0.491 Sum_probs=160.6
Q ss_pred hhcccccCcccCCccEEEEEEEECC-----CcEEEEEEEeeccCCc-chHHHHHHHHHHHhcCCCCcceEEeEeecCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGD-----DEMVVAVKVINLKQKG-ASKSFVSECEALRNIRHRNLIKIITICSSTDFE 777 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 777 (914)
.++|.+.+.||+|+||.||+|++.. +++.||||.++..... ..+.+.+|++++++++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---- 79 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTE---- 79 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEec----
Confidence 3568889999999999999998753 3578999998754433 45789999999999999999999998644
Q ss_pred CCceEeEEEecccCCCHHHHHhccCC--------cccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSND--------QVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 849 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl 849 (914)
....++||||+++++|.+++...+. ......+++.++..++.|++.|++|+|+. +++||||||+||++
T Consensus 80 -~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili 155 (280)
T cd05049 80 -GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLV 155 (280)
T ss_pred -CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEE
Confidence 3478999999999999999976532 11234578899999999999999999999 99999999999999
Q ss_pred cCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 850 DYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 850 ~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+.++.+||+|||+++......... ......+++.|+|||++. +.++|+||+||+++||+
T Consensus 156 ~~~~~~kl~d~g~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~ 218 (280)
T cd05049 156 GYDLVVKIGDFGMSRDVYTTDYYR------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIF 218 (280)
T ss_pred cCCCeEEECCcccceecccCccee------cCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHH
Confidence 999999999999997643221110 111234678999999884 58899999999999874
No 164
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.96 E-value=9.5e-29 Score=263.85 Aligned_cols=190 Identities=24% Similarity=0.493 Sum_probs=159.4
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
.+|++.+.||+|+||.||+|.+..+++.||+|++... ....+.+.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 79 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-----PPFYI 79 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCC-----CCcEE
Confidence 4688889999999999999999988999999998643 33456789999999999999999999986433 36789
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++++|.+++..... ..+++..++.++.|+++|++|||+. +++||||||+||++++++.+||+|||+++
T Consensus 80 v~e~~~~~~L~~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 80 ITEFMTYGNLLDYLRECNR----QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred EEEeCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 9999999999999975432 4688999999999999999999998 99999999999999999999999999998
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
........ ......++..|+|||.+. +.++|+|||||++|||+
T Consensus 153 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 199 (263)
T cd05052 153 LMTGDTYT-------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 199 (263)
T ss_pred ccccceee-------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHH
Confidence 76432211 111223567899999885 46899999999999984
No 165
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.96 E-value=1.1e-28 Score=264.75 Aligned_cols=199 Identities=26% Similarity=0.425 Sum_probs=158.9
Q ss_pred ccccCcccCCccEEEEEEEECCC---cEEEEEEEeeccCC--cchHHHHHHHHHHHhcCCCCcceEEeEeecCCC-CCCc
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDD---EMVVAVKVINLKQK--GASKSFVSECEALRNIRHRNLIKIITICSSTDF-EGVD 780 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~ 780 (914)
|++.+.||+|+||.||+|++..+ +..||+|+++.... ...+.+.+|++.+++++||||+++++++..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56778999999999999998643 47899999874432 234578999999999999999999998765432 2334
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++|+|.+++...........+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 5789999999999999986543222234689999999999999999999998 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++......... ......++..|+|||+.. +.++|+|||||++|||+
T Consensus 158 g~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~ 209 (273)
T cd05035 158 GLSKKIYSGDYYR------QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA 209 (273)
T ss_pred cceeecccccccc------ccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHH
Confidence 9998764332110 111234577899999874 57899999999999873
No 166
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.96 E-value=8.4e-29 Score=267.35 Aligned_cols=196 Identities=26% Similarity=0.452 Sum_probs=159.1
Q ss_pred hcccccCcccCCccEEEEEEEECCCc-----EEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDE-----MVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
++|++.+.||+|+||.||+|.+...+ ..||+|.++.... ....++.+|++++++++||||+++++++..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~----- 79 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK----- 79 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcC-----
Confidence 47889999999999999999986544 7899999864332 234578999999999999999999998643
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcc----------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCee
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQV----------EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVL 848 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NIL 848 (914)
....+++|||+++|+|.+++....... ....+++.+++.++.|++.|++|||+. +|+||||||+||+
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil 156 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCL 156 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEE
Confidence 346899999999999999997542211 114578889999999999999999999 9999999999999
Q ss_pred ecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 849 LDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 849 l~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++.++.+||+|||+++........ .......+|+.|||||++. +.++|+|||||++|||+
T Consensus 157 ~~~~~~~~L~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~ 220 (283)
T cd05048 157 VGEGLTVKISDFGLSRDIYSADYY------RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIF 220 (283)
T ss_pred EcCCCcEEECCCcceeeccccccc------cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHH
Confidence 999999999999999865322110 1112345788999999874 58899999999999975
No 167
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.96 E-value=1.1e-28 Score=266.48 Aligned_cols=187 Identities=24% Similarity=0.332 Sum_probs=157.3
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
|+..+.||+|+||+||+|++..+++.||+|.+.... ......+.+|++++++++|++|+++.+++. ..+..+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-----~~~~~~ 76 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYE-----TKDALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEe-----cCCEEE
Confidence 666788999999999999999999999999986432 223356788999999999999999988854 345789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++...+. ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~ 149 (285)
T cd05632 77 LVLTIMNGGDLKFHIYNMGN----PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred EEEEeccCccHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcc
Confidence 99999999999998865421 4689999999999999999999998 9999999999999999999999999998
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+...... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 150 ~~~~~~~---------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~ 195 (285)
T cd05632 150 VKIPEGE---------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMI 195 (285)
T ss_pred eecCCCC---------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHH
Confidence 7543211 112346999999999984 57899999999999874
No 168
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.96 E-value=1.9e-28 Score=264.39 Aligned_cols=188 Identities=22% Similarity=0.340 Sum_probs=160.2
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALV 785 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 785 (914)
.|++.+.||+|+||.||+|++..++..+|+|.+........+.+.+|+++++.++||||+++++++.. ....++|
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-----~~~~~~v 80 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY-----ENNLWIL 80 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee-----CCEEEEE
Confidence 46788899999999999999999999999999876555556788999999999999999999998643 3478999
Q ss_pred EecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 786 FEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 786 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
|||++++++.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 81 ~e~~~~~~l~~~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~ 152 (282)
T cd06643 81 IEFCAGGAVDAVMLELE-----RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK 152 (282)
T ss_pred EEecCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccc
Confidence 99999999999876532 4688999999999999999999999 999999999999999999999999999875
Q ss_pred ccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccccC
Q 042766 866 LSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~~f 914 (914)
..... .......||+.|+|||++. +.++|+||+||++++|+
T Consensus 153 ~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~ 202 (282)
T cd06643 153 NTRTI--------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 202 (282)
T ss_pred ccccc--------cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHc
Confidence 43211 1112356899999999973 35899999999999875
No 169
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.96 E-value=2.1e-28 Score=264.43 Aligned_cols=194 Identities=26% Similarity=0.432 Sum_probs=159.2
Q ss_pred hcccccCcccCCccEEEEEEEE----CCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGIL----GDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
..|++.+.||+|+||.||+|++ ..+++.||+|.++... ....+.+.+|++++++++||||+++++++... +.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~ 80 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GG 80 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CC
Confidence 3568889999999999999985 3567899999986443 33446889999999999999999999987543 23
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++++|.+++.+.. ..+++.++..++.|++.|++|+|++ +|+||||||+||+++.++.+||+|
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~d 152 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRNK-----NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGD 152 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECC
Confidence 46789999999999999986542 3578999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++.+....... .......|+..|+|||++. +.++|+|||||+++||+
T Consensus 153 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ell 206 (284)
T cd05079 153 FGLTKAIETDKEYY-----TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELL 206 (284)
T ss_pred CccccccccCccce-----eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhh
Confidence 99998764322110 0111345778899999874 47899999999999874
No 170
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.96 E-value=8.5e-29 Score=267.77 Aligned_cols=205 Identities=20% Similarity=0.277 Sum_probs=168.0
Q ss_pred CHHHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeecC
Q 042766 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSST 774 (914)
Q Consensus 696 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 774 (914)
.++.+..+.++|++.+.||+|+||.||+|++..+++.||+|+++.. ......+.+|+.+++++ +||||+++++++...
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 3445556778999999999999999999999989999999987543 22346788899999999 699999999987655
Q ss_pred CCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc
Q 042766 775 DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV 854 (914)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~ 854 (914)
..+.....++||||+++++|.+++..... ....+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~ 162 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLK--RGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGG 162 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhc--cCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCC
Confidence 44555678999999999999998864221 124578888999999999999999998 9999999999999999999
Q ss_pred EEEecccccccccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccccC
Q 042766 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~~f 914 (914)
+|++|||+++....... ......||+.|+|||++. +.++|+||+||+++||+
T Consensus 163 ~kl~dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~ 223 (286)
T cd06638 163 VKLVDFGVSAQLTSTRL--------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELG 223 (286)
T ss_pred EEEccCCceeecccCCC--------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHh
Confidence 99999999986532211 112346999999999873 46899999999999874
No 171
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.96 E-value=9.9e-29 Score=265.14 Aligned_cols=199 Identities=27% Similarity=0.408 Sum_probs=157.2
Q ss_pred ccccCcccCCccEEEEEEEECCCcE--EEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC-CCCce
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEM--VVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTDF-EGVDF 781 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~~ 781 (914)
|.+.+.||+|+||.||+|++..++. .||+|.++.. .....+.+.+|++++++++||||+++++++..... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3467899999999999999876664 6999988643 23345678899999999999999999998753321 12235
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++...+.......+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 689999999999999885432212234588999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++......... ......+++.|+|||+.. +.++|+|||||+++||+
T Consensus 158 ~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~ 208 (272)
T cd05075 158 LSKKIYNGDYYR------QGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIA 208 (272)
T ss_pred cccccCccccee------cCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHH
Confidence 998764322110 111234677899999984 58899999999999874
No 172
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.96 E-value=9.4e-29 Score=265.30 Aligned_cols=196 Identities=23% Similarity=0.347 Sum_probs=163.7
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCC-Cc
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEG-VD 780 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~-~~ 780 (914)
+.+.|+..+.||+|+||.||+|++..+++.||+|++.... .....+.+|+++++++ +||||+++++++.....+. ..
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 4567888999999999999999999999999999987543 3446788999999998 6999999999976543222 24
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++++|.+++..... ..+++..+..++.|++.|++|||++ +|+|||+||+||++++++.+||+||
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccC
Confidence 68899999999999999876432 4688999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~~f 914 (914)
|+++...... .......|++.|+|||++. +.++|+||+||+++||+
T Consensus 156 g~~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~ 210 (272)
T cd06637 156 GVSAQLDRTV--------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 210 (272)
T ss_pred CCceeccccc--------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHH
Confidence 9997653211 1122457999999999984 35799999999999874
No 173
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.96 E-value=1.1e-28 Score=262.10 Aligned_cols=188 Identities=29% Similarity=0.471 Sum_probs=156.5
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
++|++.+.||+|+||.||+|+++. +..+|+|.+... ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~i 76 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQ-----QKPLYI 76 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEcc-----CCCEEE
Confidence 578889999999999999999864 567999987533 3345678999999999999999999998643 346899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++|+|.+++.... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++
T Consensus 77 v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~ 148 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQ-----GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCcc
Confidence 999999999999987543 3578899999999999999999999 99999999999999999999999999998
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
........ ......++..|+|||++. +.++|+|||||+++|||
T Consensus 149 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~ 195 (256)
T cd05114 149 YVLDDEYT-------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred ccCCCcee-------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHH
Confidence 65332110 111234667899999984 58899999999999874
No 174
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.96 E-value=1.3e-28 Score=265.10 Aligned_cols=190 Identities=25% Similarity=0.388 Sum_probs=154.3
Q ss_pred hcccccCcccCCccEEEEEEEECCCcE----EEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEM----VVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.+|+..+.||+|+||+||+|++..+++ .||+|.+.... .....++..|+..+++++||||+++++++..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~------ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG------ 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC------
Confidence 478888999999999999999976665 46777764322 2233567788889999999999999998632
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++++||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~D 152 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHR-----DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIAD 152 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcC
Confidence 24678999999999999997643 4688999999999999999999998 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++........ .......|+..|+|||++. +.++|+|||||+++|++
T Consensus 153 fg~~~~~~~~~~~------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~ 205 (279)
T cd05111 153 FGVADLLYPDDKK------YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMM 205 (279)
T ss_pred CccceeccCCCcc------cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHH
Confidence 9999865432111 1112345778999999984 57899999999999874
No 175
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=2.2e-29 Score=236.17 Aligned_cols=190 Identities=21% Similarity=0.318 Sum_probs=154.3
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc-CCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK-QKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++....+.||+|+||.|-+.++..+|+..|+|.++.. ..+..++..+|+.+..+. ..|.+|++||... .....
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~-----regdv 120 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALF-----REGDV 120 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhh-----ccccE
Confidence 4455567899999999999999999999999999744 334556788899876554 7999999999743 23468
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
|+.||.|+ -+|..+.++.- .....+++.-.-+||..+++|+.|||++. .|||||+||+|||++.+|+|||+|||.
T Consensus 121 wIcME~M~-tSldkfy~~v~--~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGI 195 (282)
T KOG0984|consen 121 WICMELMD-TSLDKFYRKVL--KKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGI 195 (282)
T ss_pred EEeHHHhh-hhHHHHHHHHH--hcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEccccc
Confidence 99999995 58887765421 12257888889999999999999999985 899999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchh--------hhhhcccCccccccccc
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF--------FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~--------~~~~~Di~s~g~~~~~~ 913 (914)
+..+.+.... +--.|-..|||||.+ ++.++||||+|+|++||
T Consensus 196 sG~L~dSiAk---------t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiEl 245 (282)
T KOG0984|consen 196 SGYLVDSIAK---------TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEM 245 (282)
T ss_pred ceeehhhhHH---------HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhh
Confidence 9877643211 113588899999998 46899999999999987
No 176
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.96 E-value=1.5e-28 Score=266.11 Aligned_cols=196 Identities=25% Similarity=0.425 Sum_probs=160.1
Q ss_pred hcccccCcccCCccEEEEEEEEC-----CCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILG-----DDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.+|.+.+.||+|+||.||+|+.. .++..||+|.+........+.+.+|++++++++||||+++++++.. .
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 79 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE-----G 79 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----C
Confidence 57889999999999999999862 3557799999875555556789999999999999999999998653 3
Q ss_pred ceEeEEEecccCCCHHHHHhccCCc-------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQ-------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD 852 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~ 852 (914)
...++||||+++++|.+++...+.. .....+++.+++.++.|++.|++|||++ +++||||||+||+++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~ 156 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 156 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 4789999999999999999754310 1123589999999999999999999998 99999999999999999
Q ss_pred CcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 853 MVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 853 ~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+.+||+|||+++........ .......+++.|+|||++. +.++|+|||||++++|+
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~ 216 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDYY------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIF 216 (288)
T ss_pred CcEEeccCCccccccCCcee------ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHH
Confidence 99999999999865322110 1111234678899999985 47899999999999874
No 177
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.96 E-value=8.2e-29 Score=266.55 Aligned_cols=198 Identities=23% Similarity=0.382 Sum_probs=158.0
Q ss_pred HhhcccccCcccCCccEEEEEEEEC-----CCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILG-----DDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDF 776 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 776 (914)
..++|+..+.||+|+||.||+|++. .+++.||+|++.... .....++.+|+.++++++||||+++++++.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~---- 79 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS---- 79 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc----
Confidence 4568999999999999999999874 245789999885332 223457889999999999999999999854
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcc----cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQV----EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD 852 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~ 852 (914)
.....++||||+++|+|.+++...+... .....++..+..++.|++.|++|||+. +++||||||+||+++.+
T Consensus 80 -~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~ 155 (277)
T cd05062 80 -QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 155 (277)
T ss_pred -CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCC
Confidence 3347899999999999999987533211 123467888999999999999999998 99999999999999999
Q ss_pred CcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 853 MVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 853 ~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+.+|++|||+++.......... .....+++.|||||++. +.++|+|||||++|||+
T Consensus 156 ~~~~l~dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 215 (277)
T cd05062 156 FTVKIGDFGMTRDIYETDYYRK------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 215 (277)
T ss_pred CCEEECCCCCccccCCcceeec------CCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHH
Confidence 9999999999976543221111 11234678899999984 57899999999999873
No 178
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.96 E-value=8.6e-29 Score=266.82 Aligned_cols=189 Identities=23% Similarity=0.348 Sum_probs=162.7
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
++|++.+.||+|+||.||+|++..+++.||+|+++.......+.+.+|++++++++||||+++++++.. ....++
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 79 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFY-----ENKLWI 79 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEec-----CCeEEE
Confidence 568999999999999999999988899999999976655566789999999999999999999998643 447899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++++|.+++...+ ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++.
T Consensus 80 v~e~~~~~~L~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~ 151 (280)
T cd06611 80 LIEFCDGGALDSIMLELE-----RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSA 151 (280)
T ss_pred EeeccCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccch
Confidence 999999999999987643 4688999999999999999999999 99999999999999999999999999987
Q ss_pred cccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~~f 914 (914)
...... .......||+.|+|||++. +.++|+||+||++++|+
T Consensus 152 ~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~ 202 (280)
T cd06611 152 KNKSTL--------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELA 202 (280)
T ss_pred hhcccc--------cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHH
Confidence 543211 1122356899999999974 35799999999999874
No 179
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.95 E-value=1.7e-28 Score=262.28 Aligned_cols=193 Identities=24% Similarity=0.348 Sum_probs=159.4
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-----cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-----GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.+|++.+.||+|+||.||+|++..+++.||+|.+..... ...+.+.+|++++++++||||+++++++.... .
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM---E 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC---C
Confidence 478889999999999999999999999999999864321 22357888999999999999999999754321 2
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++++|.+++... ..+++..+.+++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSY------GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECc
Confidence 4678999999999999998754 2477888899999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++........ ........||..|+|||++. +.++|+|||||++++|+
T Consensus 150 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 203 (265)
T cd06652 150 FGASKRLQTICLS-----GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEML 203 (265)
T ss_pred Ccccccccccccc-----ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHh
Confidence 9999865432111 11122346899999999985 47899999999999874
No 180
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.95 E-value=3.5e-28 Score=258.20 Aligned_cols=189 Identities=20% Similarity=0.306 Sum_probs=160.5
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeecc-CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
+|++.+.||+|+||.||++++..+++.||+|.++.. .....+.+.+|+.++++++||||+++++.+. .....++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFE-----ADGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEE-----ECCEEEE
Confidence 477889999999999999999999999999998643 2334567889999999999999999999854 3458899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||++++++.+++..... ..+++..++.++.|++.|+.|||++ +|+|+||||+||++++++.++++|||.++
T Consensus 76 v~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 148 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQRG----KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSAR 148 (255)
T ss_pred EEeeCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcce
Confidence 9999999999998865432 4578889999999999999999999 99999999999999999999999999997
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
....... ......|++.|+|||++. +.++|+||+||++++|+
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~ 194 (255)
T cd08219 149 LLTSPGA--------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELC 194 (255)
T ss_pred eeccccc--------ccccccCCccccCHHHHccCCcCchhhhhhhchhheehh
Confidence 6543211 112356899999999984 47899999999999985
No 181
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.95 E-value=1.5e-28 Score=264.74 Aligned_cols=190 Identities=26% Similarity=0.420 Sum_probs=156.2
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcE----EEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEM----VVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
..+|+..+.||+|+||+||+|++..+++ .||+|+++... ....+.+.+|+.+++.++||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---- 81 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS---- 81 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC----
Confidence 3578899999999999999999866655 48999986443 23456788999999999999999999987532
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
..+++|||+++|+|.+++.... ..+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+
T Consensus 82 --~~~l~~~~~~~g~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~ 151 (279)
T cd05109 82 --TVQLVTQLMPYGCLLDYVRENK-----DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKIT 151 (279)
T ss_pred --CcEEEEEcCCCCCHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEEC
Confidence 3578999999999999997643 3688999999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
|||+++......... ......+++.|||||+.. +.++|+|||||++|||
T Consensus 152 dfG~~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el 204 (279)
T cd05109 152 DFGLARLLDIDETEY------HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWEL 204 (279)
T ss_pred CCCceeeccccccee------ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHH
Confidence 999998764321110 011224577899999984 4789999999999986
No 182
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1.3e-30 Score=251.17 Aligned_cols=197 Identities=24% Similarity=0.400 Sum_probs=165.1
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC---C
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEG---V 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~---~ 779 (914)
+.|....+||+|.||+||+|+.+.+++.||+|++-.+ .++......+|+.++..++|+|++.++++|....-.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 4566678999999999999999999999999877543 3455677889999999999999999999987644222 2
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...|+||++|+. +|.-.+.... ..++..+..+++.++..||.|+|+. .|+|||+||+|+||+.+|.+||+|
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~-----vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklAD 167 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRK-----VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLAD 167 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCcc-----ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeec
Confidence 347999999976 8998887653 5789999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchh-----hhhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF-----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~-----~~~~~Di~s~g~~~~~~f 914 (914)
||+|+.+...+...+. .-+..+-|.+|.+||.+ ++.+.|+|.-||+..|||
T Consensus 168 FGlar~fs~~~n~~kp----rytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMw 223 (376)
T KOG0669|consen 168 FGLARAFSTSKNVVKP----RYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMW 223 (376)
T ss_pred cccccceecccccCCC----CcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHH
Confidence 9999887654322111 12345679999999999 468999999999999996
No 183
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.95 E-value=1.9e-28 Score=265.92 Aligned_cols=189 Identities=24% Similarity=0.324 Sum_probs=161.6
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
+.|++.+.||+|+||.||+|++..+++.||+|.+........+.+.+|++++++++||||+++++++.. ....++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 86 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYW-----DGKLWI 86 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe-----CCeEEE
Confidence 568899999999999999999999999999999976665566788999999999999999999998643 347899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||++++++..++.+.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 87 v~e~~~~~~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 158 (292)
T cd06644 87 MIEFCPGGAVDAIMLELD-----RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSA 158 (292)
T ss_pred EEecCCCCcHHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccce
Confidence 999999999998876543 3588999999999999999999998 99999999999999999999999999987
Q ss_pred cccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~~f 914 (914)
...... .......|++.|+|||++. +.++|+||+||++|||+
T Consensus 159 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~ 209 (292)
T cd06644 159 KNVKTL--------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 209 (292)
T ss_pred eccccc--------cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHh
Confidence 532211 1112346899999999974 45799999999999875
No 184
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.95 E-value=1.4e-28 Score=265.63 Aligned_cols=196 Identities=23% Similarity=0.370 Sum_probs=157.8
Q ss_pred hcccccCcccCCccEEEEEEEEC----CCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILG----DDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
++|++.+.||+|+||.||+|++. .++..||+|.+.... ......+.+|++++++++||||+++++++.. .
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~ 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ-----E 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec-----C
Confidence 56888899999999999999863 456789999986433 2334678899999999999999999998543 3
Q ss_pred ceEeEEEecccCCCHHHHHhccCCc-----------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCee
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQ-----------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVL 848 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NIL 848 (914)
...++||||+++++|.+++...... .....+++.++..++.|++.|++|||++ +|+||||||+||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nil 156 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNIL 156 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEE
Confidence 4689999999999999998633210 0123578889999999999999999999 9999999999999
Q ss_pred ecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 849 LDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 849 l~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++.++.+||+|||+++......... ......++..|+|||++. +.++|+|||||+++||+
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 220 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSADYYR------VQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIF 220 (283)
T ss_pred EcCCCcEEeccccccccccCCccee------cccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHH
Confidence 9999999999999998654322111 112234678899999984 57899999999999975
No 185
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.95 E-value=4.9e-29 Score=243.16 Aligned_cols=187 Identities=20% Similarity=0.305 Sum_probs=155.2
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.+.+....||+|+.|.|++++++.++...|||.+.... ....+++...+.++.+.. .|.||+.+||+... ...
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n-----~dV 166 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITN-----TDV 166 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeC-----chH
Confidence 34455677999999999999999999999999997543 445567888888776664 89999999996543 367
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++.||.| +...+..+++-+ .++++.-+-++...+++||.||.+++ +|||||+||+|||+|+.|++|++|||+
T Consensus 167 ~IcMelM-s~C~ekLlkrik-----~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGI 238 (391)
T KOG0983|consen 167 FICMELM-STCAEKLLKRIK-----GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGI 238 (391)
T ss_pred HHHHHHH-HHHHHHHHHHhc-----CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccc
Confidence 8899998 457777776654 57888888899999999999999876 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchh-------hhhhcccCccccccccc
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF-------FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~-------~~~~~Di~s~g~~~~~~ 913 (914)
+..+.+... ....+|-+.|||||.+ ++.++|+||||+|+||+
T Consensus 239 sGrlvdSkA---------htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveL 287 (391)
T KOG0983|consen 239 SGRLVDSKA---------HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVEL 287 (391)
T ss_pred cceeecccc---------cccccCCccccCccccCCCCCCccchhhhhhhhccchhhh
Confidence 987765321 1234799999999998 57999999999999985
No 186
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.95 E-value=1.7e-28 Score=260.07 Aligned_cols=185 Identities=24% Similarity=0.387 Sum_probs=151.9
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecc
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYM 789 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 789 (914)
+.||+|+||.||+|++..+++.||+|.+.... ......+.+|++++++++||||+++++++.. ....++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-----KQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-----CCCeEEEEeec
Confidence 46999999999999999899999999876332 2334678999999999999999999998643 34689999999
Q ss_pred cCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccc
Q 042766 790 ENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869 (914)
Q Consensus 790 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~ 869 (914)
++++|.+++.... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++.....
T Consensus 76 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 147 (252)
T cd05084 76 QGGDFLTFLRTEG-----PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDG 147 (252)
T ss_pred cCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccc
Confidence 9999999997543 3578899999999999999999999 9999999999999999999999999998754321
Q ss_pred ccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 870 HLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 870 ~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.... ......++..|+|||.+. +.++|+||+||++|||+
T Consensus 148 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~ 190 (252)
T cd05084 148 VYAS------TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAF 190 (252)
T ss_pred cccc------cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHH
Confidence 1100 001112356799999984 47899999999999874
No 187
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.95 E-value=2.4e-28 Score=260.48 Aligned_cols=190 Identities=23% Similarity=0.454 Sum_probs=157.6
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.++||+|+||.||+|.+. ++..||+|.+.... ...+.+.+|+.++++++|+||+++++++.. ....+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 77 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK-----EEPIY 77 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcC-----CCCcE
Confidence 467999999999999999999976 55679999876432 245788999999999999999999988543 34689
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.++++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||++
T Consensus 78 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~ 150 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEG----GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLA 150 (261)
T ss_pred EEEecCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccc
Confidence 99999999999999975421 4678889999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........ ......++..|+|||++. +.++|+||+||++|+|+
T Consensus 151 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~ 198 (261)
T cd05072 151 RVIEDNEYT-------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIV 198 (261)
T ss_pred eecCCCcee-------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHH
Confidence 875432211 111234677899999985 46899999999999874
No 188
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.95 E-value=1.7e-28 Score=262.84 Aligned_cols=189 Identities=24% Similarity=0.312 Sum_probs=148.6
Q ss_pred CcccCCccEEEEEEEECC--CcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEe
Q 042766 711 NMIGQGRFGTVYKGILGD--DEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFE 787 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 787 (914)
+.||+|+||+||+|+... ....+|+|.+.... ......+.+|+++++.++||||+++++++.. ....++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~-----~~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE-----SIPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECC-----CCceEEEEE
Confidence 358999999999997532 44578888875432 2334578899999999999999999998643 346899999
Q ss_pred cccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccc
Q 042766 788 YMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867 (914)
Q Consensus 788 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~ 867 (914)
|+++|+|.+++...... .....++.....++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 151 (269)
T cd05042 76 FCPLGDLKNYLRSNRGM-VAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQY 151 (269)
T ss_pred eCCCCcHHHHHHhcccc-ccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccc
Confidence 99999999999765321 113356778889999999999999999 99999999999999999999999999987543
Q ss_pred ccccccccCCCCccccccCcccccccchhh-----------hhhcccCcccccccccC
Q 042766 868 NHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----------~~~~Di~s~g~~~~~~f 914 (914)
..... .......+++.|+|||++. +.++|+||+||+++||+
T Consensus 152 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~ 203 (269)
T cd05042 152 PEDYY------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELF 203 (269)
T ss_pred cchhe------eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHH
Confidence 22110 0112235678899999863 46899999999999874
No 189
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.95 E-value=2.1e-28 Score=268.85 Aligned_cols=191 Identities=25% Similarity=0.329 Sum_probs=150.6
Q ss_pred cCcccCCccEEEEEEEECC--CcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEe
Q 042766 710 SNMIGQGRFGTVYKGILGD--DEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFE 787 (914)
Q Consensus 710 ~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 787 (914)
..+||+|+||.||+|++.. ++..||+|.+... .....+.+|++++++++||||+++++++... .....++|||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQKVFLSH---SDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEEEEEecc---CCCeEEEEEe
Confidence 3579999999999999754 5678999988533 2345678999999999999999999987532 2346899999
Q ss_pred cccCCCHHHHHhccCCc---ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee----cCCCcEEEecc
Q 042766 788 YMENGSLEDWLHQSNDQ---VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL----DYDMVAHVGDF 860 (914)
Q Consensus 788 ~~~~gsL~~~l~~~~~~---~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl----~~~~~~ki~DF 860 (914)
|++ +++.+++...... .....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 996 5888887533211 1123588899999999999999999999 99999999999999 56679999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+|+........ ........||+.|+|||++. +.++|+||+||+++||+
T Consensus 157 G~a~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~ 210 (317)
T cd07867 157 GFARLFNSPLKP-----LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 210 (317)
T ss_pred cceeccCCCccc-----ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHH
Confidence 999876432211 11122457899999999884 46799999999999874
No 190
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=2.1e-28 Score=265.85 Aligned_cols=187 Identities=24% Similarity=0.351 Sum_probs=161.5
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
.+|+..+.||+|+||.||+|++..+++.||+|.+........+.+.+|++++++++||||+++++++.. ....++
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~-----~~~~~l 94 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-----GDELWV 94 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEe-----CCEEEE
Confidence 478889999999999999999988999999999986665566788999999999999999999998643 347899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++++|.+++.. ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 95 v~e~~~~~~L~~~~~~-------~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~ 164 (296)
T cd06654 95 VMEYLAGGSLTDVVTE-------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 164 (296)
T ss_pred eecccCCCCHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccch
Confidence 9999999999999864 2478889999999999999999999 99999999999999999999999999987
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
....... ......|++.|+|||.+. +.++|+|||||++++|+
T Consensus 165 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~ 210 (296)
T cd06654 165 QITPEQS--------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210 (296)
T ss_pred hcccccc--------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHH
Confidence 6432211 112346899999999984 47899999999999874
No 191
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.95 E-value=2.3e-28 Score=259.64 Aligned_cols=188 Identities=24% Similarity=0.461 Sum_probs=157.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
++|++.+.||+|+||.||.|++.+ +..||+|.++.. ....+.+.+|+.++++++||||+++++++... ...++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 76 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQ-----RPIYI 76 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccC-----CCcEE
Confidence 578889999999999999998864 456999988633 23456789999999999999999999986433 36799
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++|+|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++
T Consensus 77 v~e~~~~~~l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~ 148 (256)
T cd05113 77 VTEYMSNGCLLNYLREHG-----KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccce
Confidence 999999999999997543 3588999999999999999999999 99999999999999999999999999998
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
....... .......++..|+|||++. +.++|+|||||++++||
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~ 195 (256)
T cd05113 149 YVLDDEY-------TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVY 195 (256)
T ss_pred ecCCCce-------eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHh
Confidence 6543211 0111234677899999985 58899999999999985
No 192
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.95 E-value=3.8e-29 Score=247.12 Aligned_cols=189 Identities=25% Similarity=0.328 Sum_probs=158.9
Q ss_pred Hhhccccc-CcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCc
Q 042766 703 ATSEFSSS-NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 703 ~~~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 780 (914)
.+++|++. ++||-|-.|.|..|.++.+++.+|+|++. +.....+|++..-.. .|||||.++++|... +++..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~-----Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs-~~~rk 132 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL-----DSPKARREVELHWMASGHPHIVSIIDVYENS-YQGRK 132 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHh-----cCHHHHhHhhhhhhhcCCCceEEeehhhhhh-ccCce
Confidence 34566543 68999999999999999999999999984 335567899986665 699999999987544 56777
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC---CCcEEE
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY---DMVAHV 857 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~---~~~~ki 857 (914)
...+|||+|+||.|.+.+..++. ..+++.++..|++||+.|++|||+. +|.|||+||||+|... +..+|+
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~----~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGD----QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred eeEeeeecccchHHHHHHHHccc----ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEe
Confidence 88999999999999999988764 6799999999999999999999999 9999999999999974 458999
Q ss_pred ecccccccccccccccccCCCCccccccCcccccccchh----hhhhcccCccccccccc
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~ 913 (914)
+|||+|+.-..+ ......+-||+|.|||++ ++...|+||+|+++|.|
T Consensus 206 tDfGFAK~t~~~---------~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIl 256 (400)
T KOG0604|consen 206 TDFGFAKETQEP---------GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 256 (400)
T ss_pred cccccccccCCC---------ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHh
Confidence 999999864321 122245789999999999 57889999999988865
No 193
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.95 E-value=2.9e-28 Score=258.92 Aligned_cols=189 Identities=26% Similarity=0.361 Sum_probs=161.4
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|+..+.||+|++|.||+|++..+++.||+|.+... .....+.+.+|++++++++||||+++++++. ..+..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFL-----DKGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeec-----cCCEEE
Confidence 477889999999999999999999999999998743 2345568899999999999999999999854 335789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++..... ..+++.+++.++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQRG----RPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred EEEEeCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccc
Confidence 99999999999999976421 4688899999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+.+..... ......|++.|+|||++. +.++|+|||||++++|+
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 195 (256)
T cd08529 149 KLLSDNTN--------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECC 195 (256)
T ss_pred eeccCccc--------hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHH
Confidence 86643211 112346899999999985 47899999999999874
No 194
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.95 E-value=2.4e-28 Score=266.99 Aligned_cols=186 Identities=23% Similarity=0.340 Sum_probs=158.6
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
+|++.+.||+|+||.||+|++..++..||+|.++.... ....++.+|++++++++||||+++++++.. .+..++
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~l 76 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYS-----DGEISI 76 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-----CCEEEE
Confidence 68899999999999999999999999999999864422 234568899999999999999999998643 348899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++++|.++++.. ..+++..+..++.|+++|+.|||+.+ +++||||||+||+++.++.+||+|||+++
T Consensus 77 v~ey~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 148 (308)
T cd06615 77 CMEHMDGGSLDQVLKKA------GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSG 148 (308)
T ss_pred EeeccCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcc
Confidence 99999999999999764 35788899999999999999999732 89999999999999999999999999987
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
...... .....|++.|+|||++. +.++|+||+||++++|+
T Consensus 149 ~~~~~~----------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~ 192 (308)
T cd06615 149 QLIDSM----------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMA 192 (308)
T ss_pred cccccc----------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHH
Confidence 543211 12357899999999984 46799999999999874
No 195
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.95 E-value=2.1e-28 Score=265.31 Aligned_cols=206 Identities=22% Similarity=0.264 Sum_probs=168.6
Q ss_pred cCHHHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeec
Q 042766 695 VSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSS 773 (914)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 773 (914)
+...++..+.++|++.+.||+|+||.||+|+...+++.||+|++.... .....+.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 344555566789999999999999999999999899999999986432 2346778899999999 89999999999865
Q ss_pred CCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC
Q 042766 774 TDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM 853 (914)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~ 853 (914)
.+.......++||||+++++|.++++.... ....+++..++.++.|++.|++|||+. +|+||||||+||+++.++
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLI--CGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence 443334568999999999999998864211 124688999999999999999999998 999999999999999999
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccccC
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~~f 914 (914)
.+||+|||+++....... ......|+..|+|||++. +.++|+||+||+++||+
T Consensus 166 ~~kl~dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~ 227 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRL--------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELG 227 (291)
T ss_pred CEEEeecccchhcccccc--------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHh
Confidence 999999999986543211 111346899999999873 47899999999999874
No 196
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.95 E-value=2.3e-28 Score=266.43 Aligned_cols=188 Identities=24% Similarity=0.400 Sum_probs=158.1
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
++|+..+.||+|+||.||+|++..+++.||+|.++... ......+.+|++++++++||||+++++++. .....+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~-----~~~~~~ 80 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-----TEKSLT 80 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEe-----cCCeEE
Confidence 57899999999999999999999899999999987443 333457789999999999999999999954 345789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||++ ++|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 151 (301)
T cd07873 81 LVFEYLD-KDLKQYLDDCG-----NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLA 151 (301)
T ss_pred EEEeccc-cCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcch
Confidence 9999996 59999887543 3578889999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+...... .......+++.|+|||++. +.++|+||+||++++|+
T Consensus 152 ~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~ 199 (301)
T cd07873 152 RAKSIPT--------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMS 199 (301)
T ss_pred hccCCCC--------CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHH
Confidence 7543211 1112245789999999984 36799999999999874
No 197
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.95 E-value=2.9e-28 Score=265.62 Aligned_cols=194 Identities=26% Similarity=0.390 Sum_probs=155.1
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcE--EEEEEEeeccC-CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEM--VVAVKVINLKQ-KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 779 (914)
.++|++.+.||+|+||.||+|+++.++. .+|+|.++... ....+.+.+|++++.++ +||||+++++++.. .
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~-----~ 80 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-----R 80 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC-----C
Confidence 3578889999999999999999877665 45777765322 23446788999999999 89999999998643 3
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcc----------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQV----------EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 849 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl 849 (914)
+..++||||+++++|.+++...+... ....+++.+++.++.|++.|++|||++ +|+||||||+||++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili 157 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILV 157 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEe
Confidence 47899999999999999997543211 123578999999999999999999998 99999999999999
Q ss_pred cCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 850 DYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 850 ~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+.++.+||+|||+++...... ......++..|+|||++. +.++|+|||||+++||+
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell 217 (303)
T cd05088 158 GENYVAKIADFGLSRGQEVYV---------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 217 (303)
T ss_pred cCCCcEEeCccccCcccchhh---------hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHH
Confidence 999999999999986422110 011123567899999874 57899999999999874
No 198
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.95 E-value=3.2e-28 Score=260.67 Aligned_cols=189 Identities=23% Similarity=0.360 Sum_probs=150.5
Q ss_pred CcccCCccEEEEEEEEC--CCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEe
Q 042766 711 NMIGQGRFGTVYKGILG--DDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFE 787 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 787 (914)
+.||+|+||.||+|++. .++..+|+|.++.... .....+.+|+.++++++||||+++++++... ...++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV-----TPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC-----CCcEEEEE
Confidence 36899999999999864 3457899998865432 2335788999999999999999999986443 36789999
Q ss_pred cccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccc
Q 042766 788 YMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867 (914)
Q Consensus 788 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~ 867 (914)
|+++|+|.+++..... ......++..+..++.|++.|++|||+. +++||||||+||+++.++++|++|||+++...
T Consensus 76 ~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~ 151 (269)
T cd05087 76 FCPLGDLKGYLRSCRK-AELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKY 151 (269)
T ss_pred CCCCCcHHHHHHHhhh-cccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCcccccccc
Confidence 9999999999975432 1123456777889999999999999999 99999999999999999999999999997543
Q ss_pred ccccccccCCCCccccccCcccccccchhh-----------hhhcccCcccccccccC
Q 042766 868 NHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----------~~~~Di~s~g~~~~~~f 914 (914)
..... .......|++.|+|||++. +.++|+|||||+++||+
T Consensus 152 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~ 203 (269)
T cd05087 152 KEDYY------VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELF 203 (269)
T ss_pred Cccee------ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHH
Confidence 22110 1112346788999999874 46899999999999874
No 199
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.95 E-value=3.5e-28 Score=259.48 Aligned_cols=191 Identities=25% Similarity=0.375 Sum_probs=159.8
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-----cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-----GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
++|+..+.||+|++|.||+|++..+++.||+|.+..... ...+.+.+|++++++++||||+++++++. ..
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLR-----DD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEc-----cC
Confidence 468889999999999999999998999999999864321 12357889999999999999999999954 34
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
+..++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~d 147 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAY------GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGD 147 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 4899999999999999998764 3578888999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++........ ........|+..|+|||+.. +.++|+||+||++++|+
T Consensus 148 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 201 (263)
T cd06625 148 FGASKRLQTICSS-----GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEML 201 (263)
T ss_pred cccceeccccccc-----cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHH
Confidence 9999765322110 00112346889999999985 47899999999999874
No 200
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.95 E-value=3.2e-28 Score=260.30 Aligned_cols=191 Identities=27% Similarity=0.437 Sum_probs=157.9
Q ss_pred hhcccccCcccCCccEEEEEEEECCC---cEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDD---EMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.++|++.+.||+|+||+||+|++..+ ...||||+++... ......+.+|+.++++++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 77 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK-----S 77 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEec-----C
Confidence 35789999999999999999998643 4689999986443 3344678899999999999999999998543 3
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++++|.+++.... ..+++.++++++.|++.|++|||+. +|+||||||+||+++.++.+|++|
T Consensus 78 ~~~~iv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~d 149 (266)
T cd05033 78 RPVMIITEYMENGSLDKFLREND-----GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSD 149 (266)
T ss_pred CceEEEEEcCCCCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECc
Confidence 46899999999999999997643 3688999999999999999999998 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
||+++........ .......+++.|+|||.+. +.++|+|||||++|+|
T Consensus 150 fg~~~~~~~~~~~------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l 201 (266)
T cd05033 150 FGLSRRLEDSEAT------YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEV 201 (266)
T ss_pred cchhhcccccccc------eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHH
Confidence 9999876421110 0111234567899999985 4789999999999986
No 201
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.95 E-value=2.2e-28 Score=265.75 Aligned_cols=196 Identities=24% Similarity=0.396 Sum_probs=156.8
Q ss_pred hcccccCcccCCccEEEEEEEECCC--------------cEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDD--------------EMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIIT 769 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~--------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~ 769 (914)
.+|++.+.||+|+||.||+|++.++ ...||+|.++... ......+.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 5789999999999999999987543 3458999986442 233457899999999999999999999
Q ss_pred EeecCCCCCCceEeEEEecccCCCHHHHHhccCCc------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCC
Q 042766 770 ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQ------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843 (914)
Q Consensus 770 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlk 843 (914)
++.. ....++||||+++++|.+++...... .....+++.+++.++.|++.|++|||+. +++|||||
T Consensus 85 ~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlk 156 (295)
T cd05097 85 VCVS-----DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLA 156 (295)
T ss_pred EEcC-----CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccC
Confidence 9643 34789999999999999998653210 0112468889999999999999999999 99999999
Q ss_pred CCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 844 p~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+||+++.++.+||+|||+++........ .......++..|+|||++. +.++|+|||||++++|+
T Consensus 157 p~Nill~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~ 225 (295)
T cd05097 157 TRNCLVGNHYTIKIADFGMSRNLYSGDYY------RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMF 225 (295)
T ss_pred hhhEEEcCCCcEEecccccccccccCcce------eccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHH
Confidence 99999999999999999999765332110 1111234678899999874 58999999999999874
No 202
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.95 E-value=2.3e-28 Score=271.10 Aligned_cols=198 Identities=22% Similarity=0.362 Sum_probs=156.6
Q ss_pred hhcccccCcccCCccEEEEEEEEC-----CCcEEEEEEEeeccC-CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILG-----DDEMVVAVKVINLKQ-KGASKSFVSECEALRNI-RHRNLIKIITICSSTDF 776 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 776 (914)
.++|++.+.||+|+||+||+|++. .+++.||||+++... ......+.+|++++.++ +||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-- 83 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC--
Confidence 357999999999999999999853 457889999997433 22345788999999999 689999999987432
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcc---------------------------------------------------
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQV--------------------------------------------------- 805 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------------------------------------------- 805 (914)
....++||||+++|+|.+++.......
T Consensus 84 --~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 84 --GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred --CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 246789999999999999986532100
Q ss_pred ----------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccccccccc
Q 042766 806 ----------EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIAS 875 (914)
Q Consensus 806 ----------~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~ 875 (914)
....+++.++.+++.|+++|++|||++ +|+||||||+||+++.++.+||+|||+++.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~-- 236 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV-- 236 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchh--
Confidence 012468888999999999999999999 99999999999999999999999999998653221100
Q ss_pred CCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 876 KTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 876 ~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
......+++.|+|||++. +.++|+|||||++++|+
T Consensus 237 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 275 (343)
T cd05103 237 ----RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 275 (343)
T ss_pred ----hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHH
Confidence 011234677899999984 47899999999999874
No 203
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.95 E-value=3.2e-28 Score=264.26 Aligned_cols=198 Identities=26% Similarity=0.401 Sum_probs=159.0
Q ss_pred HhhcccccCcccCCccEEEEEEEECCC-----cEEEEEEEeeccC-CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDD-----EMVVAVKVINLKQ-KGASKSFVSECEALRNI-RHRNLIKIITICSSTD 775 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 775 (914)
..++|+..+.||+|+||.||+|++... ...||+|.+.... ......+.+|+++++++ +||||+++++++..
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 87 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ-- 87 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC--
Confidence 346789999999999999999998643 3789999986432 23345688999999999 89999999998643
Q ss_pred CCCCceEeEEEecccCCCHHHHHhccCC----------cccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCC
Q 042766 776 FEGVDFKALVFEYMENGSLEDWLHQSND----------QVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPS 845 (914)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~----------~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~ 845 (914)
....++||||+++|+|.+++..... ......+++..+++++.|++.|++|||+. +|+||||||+
T Consensus 88 ---~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~ 161 (293)
T cd05053 88 ---EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAAR 161 (293)
T ss_pred ---CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Ccccccccee
Confidence 3468999999999999999975321 01235688999999999999999999998 9999999999
Q ss_pred CeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 846 NVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 846 NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++.++.+|++|||+++.+........ .....++..|+|||++. +.++|+|||||+++|++
T Consensus 162 Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 228 (293)
T cd05053 162 NVLVTEDHVMKIADFGLARDIHHIDYYRK------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIF 228 (293)
T ss_pred eEEEcCCCeEEeCccccccccccccceec------cCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHh
Confidence 99999999999999999987643221111 11123567899999874 47899999999999864
No 204
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.95 E-value=5.1e-29 Score=287.44 Aligned_cols=206 Identities=24% Similarity=0.336 Sum_probs=163.2
Q ss_pred HHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCC----
Q 042766 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTD---- 775 (914)
Q Consensus 701 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 775 (914)
.+-..+|+..+.||+||||.||+|+.+-+|+.||||+|.... ......+.+|+..+++++|||||+++..+...+
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 345568889999999999999999999999999999997553 334467889999999999999999976433210
Q ss_pred --------------------------------------------------------------------------------
Q 042766 776 -------------------------------------------------------------------------------- 775 (914)
Q Consensus 776 -------------------------------------------------------------------------------- 775 (914)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -CC-----------------------------CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHH
Q 042766 776 -FE-----------------------------GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825 (914)
Q Consensus 776 -~~-----------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~g 825 (914)
.+ .....||-||||+..++.+++++... .-.....+++++||++|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~-----~~~~d~~wrLFreIlEG 709 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHF-----NSQRDEAWRLFREILEG 709 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhccc-----chhhHHHHHHHHHHHHH
Confidence 00 01346899999999888888876532 11355788999999999
Q ss_pred HHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccc----ccc------cccccCCCCccccccCcccccccch
Q 042766 826 IEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS----NHH------LDIASKTPSSSIGIKGTVGYVAPGK 895 (914)
Q Consensus 826 l~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~----~~~------~~~~~~~~~~~~~~~GT~~y~APE~ 895 (914)
|+|+|++ |||||||||.||++|+++.|||+|||+|+... ... ...........++.+||.-|+|||+
T Consensus 710 LaYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEl 786 (1351)
T KOG1035|consen 710 LAYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPEL 786 (1351)
T ss_pred HHHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHH
Confidence 9999999 99999999999999999999999999998732 111 1112222234567899999999999
Q ss_pred h-------hhhhcccCcccccccccC
Q 042766 896 F-------FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 896 ~-------~~~~~Di~s~g~~~~~~f 914 (914)
+ +..++|+||+|++++|||
T Consensus 787 l~~~~~~~Yn~KiDmYSLGIVlFEM~ 812 (1351)
T KOG1035|consen 787 LSDTSSNKYNSKIDMYSLGIVLFEML 812 (1351)
T ss_pred hcccccccccchhhhHHHHHHHHHHh
Confidence 9 357899999999999996
No 205
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.95 E-value=3.1e-28 Score=262.22 Aligned_cols=181 Identities=27% Similarity=0.345 Sum_probs=154.6
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
+|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++... ...++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~l 76 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVE-----NRISI 76 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC-----CEEEE
Confidence 6788899999999999999999899999999986442 23346788999999999999999999986543 47889
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||++++++..+. .+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.+||+|||++.
T Consensus 77 v~e~~~~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~ 143 (279)
T cd06619 77 CTEFMDGGSLDVYR----------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVST 143 (279)
T ss_pred EEecCCCCChHHhh----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcce
Confidence 99999999997642 357778889999999999999999 99999999999999999999999999997
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
...... .....||+.|+|||++. +.++|+||+||++++|+
T Consensus 144 ~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~ 187 (279)
T cd06619 144 QLVNSI----------AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELA 187 (279)
T ss_pred eccccc----------ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHH
Confidence 653211 12357999999999984 57899999999999874
No 206
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.95 E-value=2.6e-28 Score=260.09 Aligned_cols=178 Identities=23% Similarity=0.400 Sum_probs=147.6
Q ss_pred CcccCCccEEEEEEEECC------------CcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 711 NMIGQGRFGTVYKGILGD------------DEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
+.||+|+||.||+|+... ....||+|.+..........+.+|+.++++++||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~---- 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRD---- 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC----
Confidence 468999999999998642 2346899988765555566888999999999999999999996543
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc----
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV---- 854 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~---- 854 (914)
...++||||+++|+|..++.... ..+++..+++++.|+++|++|||+. +|+||||||+||+++.++.
T Consensus 77 -~~~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~ 147 (262)
T cd05077 77 -VENIMVEEFVEFGPLDLFMHRKS-----DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGEC 147 (262)
T ss_pred -CCCEEEEecccCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCC
Confidence 36789999999999999887543 3588999999999999999999998 9999999999999987664
Q ss_pred ---EEEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCccccccccc
Q 042766 855 ---AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 855 ---~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~ 913 (914)
+|++|||++...... ....||..|||||++. +.++|||||||++|||
T Consensus 148 ~~~~~l~d~g~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el 202 (262)
T cd05077 148 GPFIKLSDPGIPITVLSR------------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEI 202 (262)
T ss_pred CceeEeCCCCCCccccCc------------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHH
Confidence 899999998754211 1245888999999874 4679999999999987
No 207
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.95 E-value=3.2e-28 Score=263.89 Aligned_cols=196 Identities=27% Similarity=0.447 Sum_probs=159.8
Q ss_pred hcccccCcccCCccEEEEEEEEC-----CCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILG-----DDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.+|...+.||+|+||.||+|++. .++..||+|.++.......+.+.+|++++++++||||+++++++.. .
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 79 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGD-----G 79 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEcc-----C
Confidence 56888899999999999999864 3456799999865555455788999999999999999999998643 3
Q ss_pred ceEeEEEecccCCCHHHHHhccCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQ----------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 849 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl 849 (914)
...++||||+++++|.+++...... .....+++..++.++.|++.|++|||++ +|+||||||+||++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~ 156 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLV 156 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEE
Confidence 4689999999999999999754310 1123588999999999999999999999 99999999999999
Q ss_pred cCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 850 DYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 850 ~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+.++.+||+|||+++........ .......|+..|+|||++. +.++|+|||||+++||+
T Consensus 157 ~~~~~~~l~dfg~a~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 219 (291)
T cd05094 157 GANLLVKIGDFGMSRDVYSTDYY------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 219 (291)
T ss_pred ccCCcEEECCCCcccccCCCcee------ecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHH
Confidence 99999999999999765432111 1112345788999999885 47899999999999874
No 208
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=2.9e-28 Score=264.84 Aligned_cols=188 Identities=24% Similarity=0.347 Sum_probs=162.1
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
..+|+..+.||+|+||.||+|++..+++.||+|.+........+.+.+|+.+++.++||||+++++++.. .+..+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~ 92 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-----GDELW 92 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-----CCEEE
Confidence 3689999999999999999999988999999999976655566788999999999999999999998643 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++.+ ..+++.++..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 93 lv~e~~~~~~L~~~~~~-------~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~ 162 (297)
T cd06656 93 VVMEYLAGGSLTDVVTE-------TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 162 (297)
T ss_pred EeecccCCCCHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccc
Confidence 99999999999999864 3478889999999999999999998 9999999999999999999999999998
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
........ ......|++.|+|||.+. +.++|+||+||++|+|+
T Consensus 163 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~ 209 (297)
T cd06656 163 AQITPEQS--------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV 209 (297)
T ss_pred eEccCCcc--------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHH
Confidence 76532211 112346899999999984 47899999999999874
No 209
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=1.6e-28 Score=277.19 Aligned_cols=185 Identities=25% Similarity=0.288 Sum_probs=153.9
Q ss_pred hhcccccCcccCCccEEEEEEEEC--CCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILG--DDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
..+|.+.+.||+|+||.||+|... .+++.||+|.+... +...+|++++++++||||+++++++. ....
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~-----~~~~ 160 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYR-----WKST 160 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEe-----eCCE
Confidence 357999999999999999999864 35678999987532 34568999999999999999998854 3457
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+. +++.+++... ..+++.+++.++.|++.||+|||++ +||||||||+|||++.++.+||+|||
T Consensus 161 ~~lv~e~~~-~~l~~~l~~~------~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG 230 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVDRS------GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFG 230 (392)
T ss_pred EEEEehhcC-CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCc
Confidence 899999995 6899988543 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+|+....... ........||+.|+|||++. +.++|+||+||++|||+
T Consensus 231 ~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~ 281 (392)
T PHA03207 231 AACKLDAHPD------TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMS 281 (392)
T ss_pred cccccCcccc------cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHH
Confidence 9976543221 11123467999999999984 47899999999999973
No 210
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.95 E-value=3.3e-28 Score=273.24 Aligned_cols=199 Identities=24% Similarity=0.380 Sum_probs=159.0
Q ss_pred HHhhcccccCcccCCccEEEEEEEEC-----CCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcC-CCCcceEEeEeecC
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILG-----DDEMVVAVKVINLKQ-KGASKSFVSECEALRNIR-HRNLIKIITICSST 774 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~ 774 (914)
...++|.+.+.||+|+||.||+|+++ .+++.||+|+++... ....+.+.+|++++.++. ||||++++++|...
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 34457888999999999999999964 345789999997443 223457889999999997 99999999986543
Q ss_pred CCCCCceEeEEEecccCCCHHHHHhccCCc--------------------------------------------------
Q 042766 775 DFEGVDFKALVFEYMENGSLEDWLHQSNDQ-------------------------------------------------- 804 (914)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------------------------------------- 804 (914)
...++||||+++|+|.+++++.+..
T Consensus 114 -----~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (401)
T cd05107 114 -----GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESAD 188 (401)
T ss_pred -----CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccC
Confidence 3689999999999999999754210
Q ss_pred ------------------------------------------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCC
Q 042766 805 ------------------------------------------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDL 842 (914)
Q Consensus 805 ------------------------------------------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDl 842 (914)
.....+++..+.+++.|++.|++|||+. +|+||||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdl 265 (401)
T cd05107 189 YVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDL 265 (401)
T ss_pred ccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccC
Confidence 0113467788899999999999999998 9999999
Q ss_pred CCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 843 KPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 843 kp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+||+++.++.+|++|||+++........ .......|++.|||||++. +.++|+|||||+++||+
T Consensus 266 kp~NiLl~~~~~~kL~DfGla~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l 335 (401)
T cd05107 266 AARNVLICEGKLVKICDFGLARDIMRDSNY------ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIF 335 (401)
T ss_pred CcceEEEeCCCEEEEEecCcceeccccccc------ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHH
Confidence 999999999999999999999865332110 0111235788999999985 57899999999999874
No 211
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.95 E-value=5e-28 Score=257.25 Aligned_cols=184 Identities=24% Similarity=0.415 Sum_probs=149.4
Q ss_pred cccCCccEEEEEEEEC--CCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEec
Q 042766 712 MIGQGRFGTVYKGILG--DDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEY 788 (914)
Q Consensus 712 ~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~ 788 (914)
.||+|+||.||+|+++ .++..||+|++..... ...+.+.+|++++++++||||+++++++.. ...++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~------~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA------EALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC------CCeEEEEEe
Confidence 3899999999999875 4566799999865432 334678999999999999999999998632 257899999
Q ss_pred ccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccccc
Q 042766 789 MENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868 (914)
Q Consensus 789 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~ 868 (914)
+++++|.+++.... ..+++.++++++.|++.|++|||++ +++||||||+||+++.++.+||+|||+++....
T Consensus 76 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 147 (257)
T cd05115 76 ASGGPLNKFLSGKK-----DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGA 147 (257)
T ss_pred CCCCCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccC
Confidence 99999999987543 4688999999999999999999998 999999999999999999999999999986543
Q ss_pred cccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 869 HHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 869 ~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
...... ......+++.|+|||++. +.++|+|||||++||++
T Consensus 148 ~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 192 (257)
T cd05115 148 DDSYYK-----ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAF 192 (257)
T ss_pred Ccccee-----ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHh
Confidence 221100 111223467899999874 46899999999999864
No 212
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.95 E-value=1.7e-28 Score=261.62 Aligned_cols=191 Identities=28% Similarity=0.477 Sum_probs=162.0
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
...+|+..+.||+|+||.||+|++.. ++.||+|++..........+.+|+.+++.++||||+++++++.. ....
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 77 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSV-----GEPV 77 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEec-----CCCe
Confidence 34679999999999999999999986 88999999976655556788999999999999999999998643 3468
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++++|.+++..... ..+++.++++++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~ 150 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPEG----QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGL 150 (261)
T ss_pred EEEEeecccCCHHHHHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccc
Confidence 999999999999999976432 4678999999999999999999998 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+......... .....++..|+|||++. +.++|+||+||++++|+
T Consensus 151 ~~~~~~~~~~--------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~ 198 (261)
T cd05148 151 ARLIKEDVYL--------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMF 198 (261)
T ss_pred hhhcCCcccc--------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 9865432111 11234678899999984 47899999999998873
No 213
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.95 E-value=2.5e-28 Score=263.64 Aligned_cols=196 Identities=22% Similarity=0.351 Sum_probs=157.0
Q ss_pred hcccccCcccCCccEEEEEEEECC-----CcEEEEEEEeeccCCc-chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGD-----DEMVVAVKVINLKQKG-ASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
.+|.+.+.||+|+||.||+|++.. .++.||+|+++..... ..+.+.+|+.++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~---- 80 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE---- 80 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC----
Confidence 457788999999999999998753 3578999999744332 345788999999999999999999986433
Q ss_pred CceEeEEEecccCCCHHHHHhccCC----------cccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCee
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSND----------QVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVL 848 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~----------~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NIL 848 (914)
...++++||+++++|.+++..... ......+++..+++++.|++.|++|+|+. +|+||||||+||+
T Consensus 81 -~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil 156 (283)
T cd05091 81 -QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVL 156 (283)
T ss_pred -CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheE
Confidence 468899999999999999853211 01123578888999999999999999999 9999999999999
Q ss_pred ecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 849 LDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 849 l~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++++.+||+|||+++........ .......+++.|||||++. +.++|+||+||+++||+
T Consensus 157 ~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 220 (283)
T cd05091 157 VFDKLNVKISDLGLFREVYAADYY------KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVF 220 (283)
T ss_pred ecCCCceEecccccccccccchhe------eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHH
Confidence 999999999999999865432211 1111234678999999985 47899999999999975
No 214
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.95 E-value=2.8e-28 Score=260.80 Aligned_cols=192 Identities=25% Similarity=0.412 Sum_probs=160.4
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|++.+.||+|+||.||+|++..+++.||||.++... ......+.+|++++++++||||+++++++.. .+.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE-----DNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE-----CCe
Confidence 57899999999999999999999899999999886432 2334578899999999999999999998543 347
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++..... ....+++..++.++.|++.|++|||++ +++||||||+||+++.++.++|+|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKK--QKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhh--ccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccc
Confidence 8999999999999998864321 124578889999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++....... ......|++.|+|||.+. +.++|+||+||+++||+
T Consensus 152 ~~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~ 200 (267)
T cd08228 152 LGRFFSSKTT--------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA 200 (267)
T ss_pred cceeccchhH--------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHh
Confidence 9987543221 111346889999999984 47899999999999875
No 215
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1.2e-28 Score=262.50 Aligned_cols=188 Identities=22% Similarity=0.300 Sum_probs=154.6
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~ 780 (914)
...|++.+.||+||.+.||+++..+ ...||+|++... +......+..|++.|.+++ |.+||++++|-.. ++
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~-----d~ 433 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT-----DG 433 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-----Cc
Confidence 4578999999999999999998864 456777766533 3445678999999999995 9999999999443 56
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
+.|+||||- ..+|.+++++... ..+...++.+..|++.|+.++|.+ ||||.||||.|+|+ -+|.+||+||
T Consensus 434 ~lYmvmE~G-d~DL~kiL~k~~~-----~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLl-VkG~LKLIDF 503 (677)
T KOG0596|consen 434 YLYMVMECG-DIDLNKILKKKKS-----IDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLL-VKGRLKLIDF 503 (677)
T ss_pred eEEEEeecc-cccHHHHHHhccC-----CCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEE-EeeeEEeeee
Confidence 899999987 4699999987653 333337788999999999999999 99999999999998 4679999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh---------------hhhcccCccccccccc
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------------MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------------~~~~Di~s~g~~~~~~ 913 (914)
|+|..+..+..... ....+||+.|||||.+. +.++||||+||++|+|
T Consensus 504 GIA~aI~~DTTsI~------kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqM 565 (677)
T KOG0596|consen 504 GIANAIQPDTTSIV------KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQM 565 (677)
T ss_pred chhcccCcccccee------eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHH
Confidence 99998765443322 22468999999999992 4889999999999998
No 216
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.95 E-value=3.6e-28 Score=267.98 Aligned_cols=193 Identities=19% Similarity=0.177 Sum_probs=154.7
Q ss_pred ccCcccCC--ccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 709 SSNMIGQG--RFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 709 ~~~~lg~G--~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
+.++||+| +||+||+|+++.+++.||+|+++... ....+.+.+|+++++.++||||+++++++... +..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~-----~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD-----NELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC-----CEEEE
Confidence 45789999 67899999999999999999997542 23345678899999999999999999996543 47899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+.
T Consensus 77 v~e~~~~~~l~~~~~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 77 VTSFMAYGSAKDLICTHFM----DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred EEeccCCCcHHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhh
Confidence 9999999999999975421 3588999999999999999999998 99999999999999999999999998765
Q ss_pred cccccccccccCCCCccccccCcccccccchhh------hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~~~~~~f 914 (914)
............ ........++..|||||++. +.++|+||+||+++||+
T Consensus 150 ~~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~ 204 (327)
T cd08227 150 SMINHGQRLRVV-HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELA 204 (327)
T ss_pred cccccccccccc-ccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHH
Confidence 433211111000 00112245788899999984 37899999999999874
No 217
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.95 E-value=4.1e-28 Score=257.83 Aligned_cols=188 Identities=30% Similarity=0.474 Sum_probs=155.1
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
.+|++.+.||+|+||.||+|+++ ++..+|+|++... ......+.+|++++++++||||+++++++. ..+..++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~l 76 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCT-----KQRPIFI 76 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEEc-----CCCceEE
Confidence 46888999999999999999986 4668999988533 223457889999999999999999999854 3347899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++++|.+++.... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 77 v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~ 148 (256)
T cd05059 77 VTEYMANGCLLNYLRERK-----GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLAR 148 (256)
T ss_pred EEecCCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccce
Confidence 999999999999997543 3678999999999999999999999 99999999999999999999999999998
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
...+.... ......++..|+|||.+. +.++|+|||||++++|+
T Consensus 149 ~~~~~~~~-------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~ 195 (256)
T cd05059 149 YVLDDQYT-------SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred eccccccc-------ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHh
Confidence 65432111 111223456899999984 47899999999999864
No 218
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.95 E-value=4.8e-28 Score=260.56 Aligned_cols=197 Identities=21% Similarity=0.366 Sum_probs=159.2
Q ss_pred hhcccccCcccCCccEEEEEEEECCC-----cEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDD-----EMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFE 777 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 777 (914)
.++|++.+.||+|+||.||+|.+... +..||+|.+.... ......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---- 80 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVST---- 80 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC----
Confidence 35788999999999999999998643 4789999986432 2334578899999999999999999998543
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcc----cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQV----EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM 853 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~ 853 (914)
....++||||+++|+|.+++....... ....+++..++.++.|++.|+.|||+. +|+||||||+||+++.++
T Consensus 81 -~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~ 156 (277)
T cd05032 81 -GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDL 156 (277)
T ss_pred -CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCC
Confidence 357899999999999999997543211 123478889999999999999999998 999999999999999999
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.+||+|||+++......... ......+|..|+|||++. +.++|+||+||+++|++
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 215 (277)
T cd05032 157 TVKIGDFGMTRDIYETDYYR------KGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMA 215 (277)
T ss_pred CEEECCcccchhhccCcccc------cCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhh
Confidence 99999999998654322111 111235788999999884 48899999999999874
No 219
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.95 E-value=3.1e-28 Score=262.05 Aligned_cols=197 Identities=23% Similarity=0.380 Sum_probs=158.5
Q ss_pred hhcccccCcccCCccEEEEEEEECC-----CcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGD-----DEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFE 777 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 777 (914)
.++|++.+.||+|+||.||+|++.. ++..||+|.+.... ......+.+|+.++++++|+||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--- 81 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER--- 81 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC---
Confidence 4678999999999999999999976 77899999886433 23345789999999999999999999986433
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC---
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQV-EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM--- 853 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~--- 853 (914)
...++||||+++++|.+++...+... ....+++.++++++.||+.|++|||+. +++||||||+||+++.++
T Consensus 82 --~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~ 156 (277)
T cd05036 82 --LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGR 156 (277)
T ss_pred --CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCc
Confidence 35789999999999999997653211 123589999999999999999999999 999999999999998764
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.+|++|||+++.......... .....++..|||||++. +.++|||||||+++||+
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 215 (277)
T cd05036 157 VAKIADFGMARDIYRASYYRK------GGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIF 215 (277)
T ss_pred ceEeccCccccccCCccceec------CCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHH
Confidence 699999999986532211110 11123457899999984 58999999999999874
No 220
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.95 E-value=2.3e-28 Score=260.29 Aligned_cols=186 Identities=31% Similarity=0.473 Sum_probs=158.2
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcch--HHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGAS--KSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
|+..+.||+|+||+||+|++..+++.||+|++........ ....+|+.++++++||||+++++++.. ....++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----cccccc
Confidence 6778899999999999999999999999999976543322 234569999999999999999999654 347889
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++++|.+++... ..+++.++..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||.+.
T Consensus 76 v~~~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQKN------KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEETTEBHHHHHHHH------SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred ccccccccccccccccc------ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccc
Confidence 99999999999999833 4689999999999999999999999 99999999999999999999999999997
Q ss_pred cccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
..... ........||+.|+|||++. +.++|+||+||++++|+
T Consensus 147 ~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~ 193 (260)
T PF00069_consen 147 KLSEN--------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELL 193 (260)
T ss_dssp ESTST--------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHH
T ss_pred ccccc--------cccccccccccccccccccccccccccccccccccccccccc
Confidence 54111 11122357899999999985 49999999999999874
No 221
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.95 E-value=2.7e-28 Score=259.46 Aligned_cols=188 Identities=33% Similarity=0.544 Sum_probs=152.3
Q ss_pred ccCcccCCccEEEEEEEEC----CCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 709 SSNMIGQGRFGTVYKGILG----DDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 709 ~~~~lg~G~~g~Vy~~~~~----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
..+.||+|+||.||+|.+. ..+..||||.++.... ...+.+.+|++.+++++||||++++|+|.... ..+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~-----~~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE-----PLF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS-----SEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccc-----ccc
Confidence 4578999999999999997 4568899999964332 34678999999999999999999999987332 489
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++|+|.+++.... ...+++.+++.|+.|+++||+|||++ +|+|+||+++||+++.++.+||+|||++
T Consensus 78 lv~e~~~~g~L~~~L~~~~----~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~ 150 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKN----KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLS 150 (259)
T ss_dssp EEEE--TTEBHHHHHHHTC----TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTG
T ss_pred ccccccccccccccccccc----cccccccccccccccccccccccccc---cccccccccccccccccccccccccccc
Confidence 9999999999999998762 15689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........ .......+...|+|||.+. +.++||||||++++|+|
T Consensus 151 ~~~~~~~~~------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~ 199 (259)
T PF07714_consen 151 RPISEKSKY------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEIL 199 (259)
T ss_dssp EETTTSSSE------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHH
T ss_pred ccccccccc------cccccccccccccccccccccccccccccccccccccccc
Confidence 876321111 1111234778899999984 58999999999999874
No 222
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.95 E-value=5e-28 Score=258.07 Aligned_cols=188 Identities=27% Similarity=0.479 Sum_probs=155.6
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
++|++.+.||+|+||.||+|++.++ ..||+|+++... ...+.+.+|++++++++||||+++++++.. ...++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~~l 77 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIYI 77 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC------CCcEE
Confidence 5799999999999999999998755 469999986433 234678999999999999999999987421 34689
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++|+|.+++..... ..+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.+||+|||.++
T Consensus 78 v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~ 150 (262)
T cd05071 78 VTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLAR 150 (262)
T ss_pred EEEcCCCCcHHHHHhhccc----cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCcee
Confidence 9999999999999975421 3578899999999999999999999 99999999999999999999999999998
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.+...... ......++..|+|||+.. +.++|+||+||++|||+
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ell 197 (262)
T cd05071 151 LIEDNEYT-------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 197 (262)
T ss_pred eccccccc-------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHH
Confidence 65432211 111234678899999884 57999999999999874
No 223
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.95 E-value=4.1e-28 Score=263.74 Aligned_cols=196 Identities=23% Similarity=0.398 Sum_probs=156.9
Q ss_pred hcccccCcccCCccEEEEEEEECC----------------CcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGD----------------DEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKI 767 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l 767 (914)
++|++.+.||+|+||.||+|++.. ++..||+|++.... .....++.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 468999999999999999986532 34579999986442 3345688999999999999999999
Q ss_pred EeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCc-----ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCC
Q 042766 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQ-----VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDL 842 (914)
Q Consensus 768 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDl 842 (914)
++++... +..++||||+++|+|.+++...... .....+++.++..++.|++.|++|||+. +|+||||
T Consensus 85 ~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl 156 (296)
T cd05095 85 LAVCITS-----DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDL 156 (296)
T ss_pred EEEEecC-----CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccC
Confidence 9986443 3689999999999999999764321 1123578889999999999999999999 9999999
Q ss_pred CCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 843 KPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 843 kp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+||+++.++.+|++|||+++.+...... .......+++.|+|||+.. +.++|+|||||++|||+
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~ 226 (296)
T cd05095 157 ATRNCLVGKNYTIKIADFGMSRNLYSGDYY------RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEIL 226 (296)
T ss_pred ChheEEEcCCCCEEeccCcccccccCCcce------eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHH
Confidence 999999999999999999999865332110 0111234567899999874 57899999999999874
No 224
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.95 E-value=5.4e-28 Score=262.89 Aligned_cols=197 Identities=22% Similarity=0.377 Sum_probs=159.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCc----------------EEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDE----------------MVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIK 766 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~----------------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 766 (914)
.++|++.+.||+|+||.||+|++...+ ..||+|++.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 357899999999999999999876433 568999986443 234567889999999999999999
Q ss_pred EEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCc-----ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecC
Q 042766 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQ-----VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGD 841 (914)
Q Consensus 767 l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrD 841 (914)
+++++... ...++||||+++++|.+++...... .....+++..++.++.|++.|++|||+. +|+|||
T Consensus 84 ~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~d 155 (296)
T cd05051 84 LLGVCTVD-----PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRD 155 (296)
T ss_pred EEEEEecC-----CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccc
Confidence 99986443 4789999999999999999764311 0113689999999999999999999998 999999
Q ss_pred CCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 842 LKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 842 lkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||+||+++.++.++++|||+++......... ......+|+.|||||++. +.++|+|||||++|||+
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 226 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDYYR------VQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEIL 226 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCccee------ecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHH
Confidence 99999999999999999999997654322111 111235778999999974 58899999999999863
No 225
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.95 E-value=5.6e-28 Score=258.84 Aligned_cols=193 Identities=27% Similarity=0.461 Sum_probs=156.5
Q ss_pred hcccccCcccCCccEEEEEEEECCCcE---EEEEEEeecc-CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEM---VVAVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
++|++.+.||+|+||.||+|++..+++ .||||.++.. .....+++..|+.++++++||||+++++++. ...
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-----~~~ 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-----KSR 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEEC-----CCC
Confidence 468889999999999999999876553 6999998644 2334568999999999999999999999853 344
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++++|.+++.... ..+++.+++.++.|++.|++|||++ +++||||||+||+++.++.+|++||
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~df 150 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQND-----GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDF 150 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCC
Confidence 6899999999999999987643 3578999999999999999999998 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
|+++........... .......++..|+|||++. +.++|+||+||+++||
T Consensus 151 g~~~~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~ 204 (269)
T cd05065 151 GLSRFLEDDTSDPTY---TSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 204 (269)
T ss_pred ccccccccCcccccc---ccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHH
Confidence 999865432211100 0011112346799999985 4789999999999985
No 226
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.95 E-value=3.2e-28 Score=263.41 Aligned_cols=198 Identities=22% Similarity=0.360 Sum_probs=156.7
Q ss_pred HhhcccccCcccCCccEEEEEEEECC-----CcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGD-----DEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDF 776 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 776 (914)
..++|++.+.||+|+||.||+|++++ .+..||+|.++.... .....+.+|+.++++++||||+++++++..
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 80 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSK--- 80 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC---
Confidence 45789999999999999999997652 356899998864332 233467889999999999999999998543
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcc----cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQV----EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD 852 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~ 852 (914)
....++||||+++|+|.+++...+... .....++..+.+++.|++.|++|||++ +|+||||||+||+++.+
T Consensus 81 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~ 155 (288)
T cd05061 81 --GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHD 155 (288)
T ss_pred --CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCC
Confidence 346799999999999999997533211 123456778889999999999999998 99999999999999999
Q ss_pred CcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 853 MVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 853 ~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+.+|++|||+++......... ......++..|+|||++. +.++|+|||||+++||+
T Consensus 156 ~~~~L~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~ 215 (288)
T cd05061 156 FTVKIGDFGMTRDIYETDYYR------KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 215 (288)
T ss_pred CcEEECcCCcccccccccccc------ccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHH
Confidence 999999999998654322111 111234677899999984 58899999999999873
No 227
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.95 E-value=4.4e-28 Score=259.32 Aligned_cols=191 Identities=28% Similarity=0.443 Sum_probs=156.3
Q ss_pred hcccccCcccCCccEEEEEEEECCC---cEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDD---EMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.+|++.+.||+|+||.||+|++..+ +..||+|.++... ....+.+.+|+.++++++||||+++++++.. .+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 78 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-----SK 78 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----CC
Confidence 5788999999999999999988533 3479999886432 2234678999999999999999999998643 34
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++||
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~df 150 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLRKHD-----GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDF 150 (267)
T ss_pred ccEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCC
Confidence 7899999999999999997643 3578899999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
|+++.+....... .......++..|+|||++. +.++|+|||||++||+
T Consensus 151 g~~~~~~~~~~~~-----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el 202 (267)
T cd05066 151 GLSRVLEDDPEAA-----YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 202 (267)
T ss_pred Cccccccccccee-----eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHH
Confidence 9998764322110 0111223467899999985 4789999999999985
No 228
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-28 Score=254.44 Aligned_cols=197 Identities=25% Similarity=0.386 Sum_probs=163.9
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-------CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-------KGASKSFVSECEALRNIRHRNLIKIITICSSTDF 776 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 776 (914)
.++|-....||+|+|+.||+|.+....+.||||+-.... +.-.+...+|.++.+.++||-||++|+|+....
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt- 540 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT- 540 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc-
Confidence 346778889999999999999999888999999875321 122356789999999999999999999975332
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC---CC
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY---DM 853 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~---~~ 853 (914)
+..+-|.|||+|.+|+-|++.+ +.+++.++..|+.||+.||.||.+. +|+|||-||||.|||+.. -|
T Consensus 541 ---dsFCTVLEYceGNDLDFYLKQh------klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacG 610 (775)
T KOG1151|consen 541 ---DSFCTVLEYCEGNDLDFYLKQH------KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACG 610 (775)
T ss_pred ---ccceeeeeecCCCchhHHHHhh------hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccc
Confidence 4678899999999999999987 4689999999999999999999987 789999999999999953 47
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhh--------hhhcccCcccccccc
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF--------MLYTHIPSFSCTNVH 912 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~--------~~~~Di~s~g~~~~~ 912 (914)
.+||+|||+++.+.++..+.... ..-....+||.+|.+||.|- +.++|+||+|+++|.
T Consensus 611 eIKITDFGLSKIMdddSy~~vdG-meLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQ 676 (775)
T KOG1151|consen 611 EIKITDFGLSKIMDDDSYNSVDG-MELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQ 676 (775)
T ss_pred eeEeeecchhhhccCCccCcccc-eeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhh
Confidence 89999999999987655432211 22234578999999999993 589999999999875
No 229
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.95 E-value=5.4e-28 Score=261.99 Aligned_cols=185 Identities=26% Similarity=0.330 Sum_probs=160.1
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++. ....
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQ-----DDSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEE-----cCCe
Confidence 36888999999999999999999899999999986432 234467889999999999999999999854 3457
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++++|.+++... ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~------~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKS------GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred EEEEEecCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCC
Confidence 89999999999999998764 3688899999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++..... .....|++.|+|||.+. +.++|+||+|+++++|+
T Consensus 147 ~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 192 (290)
T cd05580 147 FAKRVKGR-----------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEML 192 (290)
T ss_pred CccccCCC-----------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHH
Confidence 99865432 12346899999999985 47899999999999874
No 230
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.95 E-value=3e-28 Score=261.40 Aligned_cols=177 Identities=22% Similarity=0.340 Sum_probs=145.3
Q ss_pred cccCCccEEEEEEEECC------------------------CcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceE
Q 042766 712 MIGQGRFGTVYKGILGD------------------------DEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKI 767 (914)
Q Consensus 712 ~lg~G~~g~Vy~~~~~~------------------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 767 (914)
.||+|+||.||+|+... ....||+|+++.........+.+|++++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999998532 124688998865544445678899999999999999999
Q ss_pred EeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCe
Q 042766 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNV 847 (914)
Q Consensus 768 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NI 847 (914)
+++|... ...++||||+++|+|..++.... ..+++..++.++.|+++||+|||++ +|+||||||+||
T Consensus 82 ~~~~~~~-----~~~~lv~ey~~~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Ni 148 (274)
T cd05076 82 HGVCVRG-----SENIMVEEFVEHGPLDVCLRKEK-----GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNI 148 (274)
T ss_pred EEEEEeC-----CceEEEEecCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccE
Confidence 9997543 36789999999999999987543 3678899999999999999999998 999999999999
Q ss_pred eecCCC-------cEEEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCccccccccc
Q 042766 848 LLDYDM-------VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 848 Ll~~~~-------~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~ 913 (914)
+++.++ .+|++|||.+...... ....|+..|+|||++. +.++|+|||||+++|+
T Consensus 149 ll~~~~~~~~~~~~~kl~d~g~~~~~~~~------------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el 214 (274)
T cd05076 149 LLARLGLAEGTSPFIKLSDPGVSFTALSR------------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI 214 (274)
T ss_pred EEeccCcccCccceeeecCCccccccccc------------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHH
Confidence 997654 4899999988643211 1135788899999884 4789999999999986
No 231
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.95 E-value=9.3e-28 Score=256.65 Aligned_cols=193 Identities=23% Similarity=0.364 Sum_probs=159.1
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-----cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-----GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.+|+..+.||+|+||.||+|.+..++..||+|++..... ...+.+.+|++++++++||||+++++++... ..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR---AE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC---CC
Confidence 368889999999999999999998999999999864321 2335688999999999999999999986432 13
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...+++|||+++++|.+++... ..+++...+.++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAY------GALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence 4678999999999999999754 3578888999999999999999998 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++....... .........|+..|+|||++. +.++|+||+||++++++
T Consensus 150 fg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~ 203 (266)
T cd06651 150 FGASKRLQTICM-----SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEML 203 (266)
T ss_pred CCCccccccccc-----cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHH
Confidence 999976532110 001112346899999999985 46899999999999874
No 232
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.95 E-value=5e-28 Score=261.57 Aligned_cols=189 Identities=24% Similarity=0.355 Sum_probs=157.4
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|++.+.||+|++|.||+|++..+++.||+|+++... ....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ-----ESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee-----CCeEE
Confidence 4788899999999999999999899999999986442 2334678899999999999999999999643 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||++ +++.+++..... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 148 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLPK---GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLA 148 (285)
T ss_pred EEEecCC-CCHHHHHhcCCC---CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccce
Confidence 9999997 689888865321 24688999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+...... .......|++.|+|||++. +.++|+||+||++++|+
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~ 196 (285)
T cd07861 149 RAFGIPV--------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMA 196 (285)
T ss_pred eecCCCc--------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHH
Confidence 7543211 0111235789999999874 46799999999999874
No 233
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.95 E-value=7.6e-28 Score=256.65 Aligned_cols=189 Identities=26% Similarity=0.341 Sum_probs=162.6
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
++|++.+.||+|+||.||+|++..+++.+|+|++........+.+.+|++++++++||||+++++++.. ....++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~l 77 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLR-----RDKLWI 77 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEe-----CCEEEE
Confidence 578899999999999999999988889999999986655566789999999999999999999998543 447899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
+|||+++++|.+++.... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 78 ~~e~~~~~~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 149 (262)
T cd06613 78 VMEYCGGGSLQDIYQVTR-----GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSA 149 (262)
T ss_pred EEeCCCCCcHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccch
Confidence 999999999999987642 3688899999999999999999998 99999999999999999999999999997
Q ss_pred cccccccccccCCCCccccccCcccccccchhhh-------hhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM-------LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~-------~~~Di~s~g~~~~~~f 914 (914)
...... .......|+..|+|||.+.+ .++|+||+||++++|+
T Consensus 150 ~~~~~~--------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~ 198 (262)
T cd06613 150 QLTATI--------AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELA 198 (262)
T ss_pred hhhhhh--------hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHH
Confidence 654211 01123468999999999743 4789999999999874
No 234
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.95 E-value=6e-28 Score=258.44 Aligned_cols=191 Identities=25% Similarity=0.344 Sum_probs=158.6
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
+++.+.....||+|+||.||+|++..++..||+|.+........+.+.+|++++++++|+||+++++++.. .+..
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~ 80 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSE-----NGFF 80 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeecc-----CCEE
Confidence 44555566789999999999999998999999999876655566789999999999999999999998643 3478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCC--CHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC-CCcEEEec
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKL--SLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY-DMVAHVGD 859 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~--~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~-~~~~ki~D 859 (914)
++||||+++++|.+++.... ..+ ++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~d 152 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSKW-----GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISD 152 (268)
T ss_pred EEEEecCCCCCHHHHHHHhc-----ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEec
Confidence 99999999999999997542 233 7788889999999999999998 9999999999999986 67999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh------hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~~~~~~f 914 (914)
||.+........ ......|++.|+|||++. +.++|+||+|+++++|+
T Consensus 153 fg~~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~ 205 (268)
T cd06624 153 FGTSKRLAGINP--------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMA 205 (268)
T ss_pred chhheecccCCC--------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHH
Confidence 999876532111 111245899999999873 47899999999998874
No 235
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.95 E-value=5.8e-28 Score=262.64 Aligned_cols=193 Identities=24% Similarity=0.396 Sum_probs=154.5
Q ss_pred hcccccCcccCCccEEEEEEEECCCcE--EEEEEEeecc-CCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCc
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEM--VVAVKVINLK-QKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 780 (914)
++|++.+.||+|+||+||+|+...++. .+|+|.++.. .....+.+.+|+++++++ +||||+++++++.. ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-----~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACEN-----RG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc-----CC
Confidence 578899999999999999999876664 4688887632 233446789999999999 79999999998543 34
Q ss_pred eEeEEEecccCCCHHHHHhccCCcc----------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQV----------EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 850 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~ 850 (914)
..++||||+++++|.+++....... ....+++.++..++.|++.|++|||++ +|+||||||+||+++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~ 153 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVG 153 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEEC
Confidence 6899999999999999997543111 113588899999999999999999998 999999999999999
Q ss_pred CCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 851 YDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 851 ~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.++.+||+|||++....... .......+..|+|||++. +.++|+|||||++|||+
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~ 212 (297)
T cd05089 154 ENLASKIADFGLSRGEEVYV---------KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIV 212 (297)
T ss_pred CCCeEEECCcCCCcccccee---------ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHH
Confidence 99999999999986432110 001112356799999984 57899999999999985
No 236
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=6.7e-28 Score=261.76 Aligned_cols=187 Identities=25% Similarity=0.367 Sum_probs=161.8
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
.+|+..+.||+|+||.||+|++..+++.||+|.+........+.+.+|++++++++||||+++++++.. ....++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLV-----GDELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEec-----CceEEE
Confidence 468999999999999999999998999999999976655566788999999999999999999998543 347899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++++|.+++.. ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++
T Consensus 94 v~e~~~~~~L~~~~~~-------~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~ 163 (296)
T cd06655 94 VMEYLAGGSLTDVVTE-------TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCA 163 (296)
T ss_pred EEEecCCCcHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccch
Confidence 9999999999998864 3578999999999999999999999 99999999999999999999999999987
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
....... ......|++.|+|||.+. +.++|+|||||++++|+
T Consensus 164 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~ll 209 (296)
T cd06655 164 QITPEQS--------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV 209 (296)
T ss_pred hcccccc--------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHH
Confidence 6543211 112346899999999984 47899999999999874
No 237
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.95 E-value=8.2e-28 Score=264.05 Aligned_cols=197 Identities=25% Similarity=0.285 Sum_probs=161.5
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc---chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG---ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
+|+..+.||+|+||.||+|++..+++.||+|.+...... ..+.+.+|++++++++||||+++++++. .....
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~ 76 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ-----TETYL 76 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee-----cCCEE
Confidence 688899999999999999999988999999999754322 4467889999999999999999998853 34578
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||+
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~ 149 (316)
T cd05574 77 CLVMDYCPGGELFRLLQRQPG----KCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDL 149 (316)
T ss_pred EEEEEecCCCCHHHHHHhCCC----CccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecch
Confidence 999999999999999875432 4688999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccc---------------------cCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIA---------------------SKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~---------------------~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........... ...........||..|+|||+.. +.++||||+||++|+|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~ 226 (316)
T cd05574 150 SKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEML 226 (316)
T ss_pred hhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHh
Confidence 876432110000 00001122457899999999985 46899999999999874
No 238
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.95 E-value=8.3e-28 Score=259.57 Aligned_cols=190 Identities=29% Similarity=0.406 Sum_probs=155.2
Q ss_pred ccccCcccCCccEEEEEEEE----CCCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 707 FSSSNMIGQGRFGTVYKGIL----GDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
|+..+.||+|+||+||+++. ..++..||+|.++.... ...+.+.+|++++++++||||+++++++... ....
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~ 82 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ---GGKG 82 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CCce
Confidence 38889999999999988653 35678899999875432 3456788999999999999999999987532 2346
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++++|.+++... .+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 83 ~~lv~e~~~~~~l~~~~~~~-------~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg 152 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPKH-------KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFG 152 (283)
T ss_pred EEEEecCCCCCCHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecc
Confidence 78999999999999998653 589999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++.......... ......++..|+|||+.. +.++|+|||||+++||+
T Consensus 153 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~ 204 (283)
T cd05080 153 LAKAVPEGHEYYR-----VREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELL 204 (283)
T ss_pred cccccCCcchhhc-----cCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHH
Confidence 9986643221100 011234677899999884 57899999999999875
No 239
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.95 E-value=1.1e-27 Score=254.80 Aligned_cols=190 Identities=24% Similarity=0.383 Sum_probs=159.6
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|++.+.||+|++|.||+|++..+++.||+|.+.... ....+.+.+|++++++++|||++++++.+.. .....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG----EDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC----CCCEEE
Confidence 4788899999999999999999889999999986443 2344578899999999999999999887432 224678
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++..... ..+++.++..++.|++.|++|+|+. +|+||||||+||+++.++.++|+|||++
T Consensus 77 lv~e~~~~~~l~~~l~~~~~----~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQKG----KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred EEecccCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccce
Confidence 99999999999999976422 4589999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+...... .......|++.|+|||+.. +.++|+||+||++++|+
T Consensus 150 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~ 196 (257)
T cd08223 150 RVLENQC--------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMA 196 (257)
T ss_pred EEecccC--------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHH
Confidence 8654321 1122356899999999985 46899999999999874
No 240
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=6.8e-28 Score=263.07 Aligned_cols=198 Identities=24% Similarity=0.397 Sum_probs=158.6
Q ss_pred HhhcccccCcccCCccEEEEEEEEC-------CCcEEEEEEEeeccC-CcchHHHHHHHHHHHhc-CCCCcceEEeEeec
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILG-------DDEMVVAVKVINLKQ-KGASKSFVSECEALRNI-RHRNLIKIITICSS 773 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 773 (914)
...+|.+.+.||+|+||.||+|++. .++..||+|.++... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3467889999999999999999853 234579999886432 23446789999999999 89999999998644
Q ss_pred CCCCCCceEeEEEecccCCCHHHHHhccCCcc----------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCC
Q 042766 774 TDFEGVDFKALVFEYMENGSLEDWLHQSNDQV----------EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843 (914)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlk 843 (914)
....++||||+++|+|.+++....... ....+++.+++.++.|+++|++|||++ +|+|||||
T Consensus 93 -----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlk 164 (304)
T cd05101 93 -----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLA 164 (304)
T ss_pred -----CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccc
Confidence 347899999999999999997643210 124578889999999999999999999 99999999
Q ss_pred CCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 844 p~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+||+++.++.+||+|||+++......... ......+++.|+|||++. +.++|+|||||++++|+
T Consensus 165 p~Nili~~~~~~kl~D~g~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 233 (304)
T cd05101 165 ARNVLVTENNVMKIADFGLARDVNNIDYYK------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 233 (304)
T ss_pred cceEEEcCCCcEEECCCccceecccccccc------cccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHH
Confidence 999999999999999999998664322111 111234678899999985 46899999999999874
No 241
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.95 E-value=7.5e-28 Score=262.22 Aligned_cols=193 Identities=24% Similarity=0.396 Sum_probs=157.8
Q ss_pred hhcccccCcccCCccEEEEEEEE-----CCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGIL-----GDDEMVVAVKVINLKQ-KGASKSFVSECEALRNI-RHRNLIKIITICSSTDF 776 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 776 (914)
.++|.+.+.||+|+||.||+|++ ..++..||+|.++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-- 111 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG-- 111 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC--
Confidence 35799999999999999999985 3356689999986443 23346789999999999 799999999986443
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEE
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAH 856 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 856 (914)
+..++||||+++|+|.+++..... ..+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+|
T Consensus 112 ---~~~~lv~e~~~~~~L~~~i~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~ 181 (302)
T cd05055 112 ---GPILVITEYCCYGDLLNFLRRKRE----SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVK 181 (302)
T ss_pred ---CceEEEEEcCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEE
Confidence 468999999999999999975431 3489999999999999999999999 999999999999999999999
Q ss_pred EecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 857 VGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 857 i~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++|||+++........ .......+++.|+|||++. +.++|+||+||+++||+
T Consensus 182 l~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~ 237 (302)
T cd05055 182 ICDFGLARDIMNDSNY------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIF 237 (302)
T ss_pred ECCCcccccccCCCce------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHH
Confidence 9999999865432110 0111234678899999885 47899999999999874
No 242
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.95 E-value=9.1e-28 Score=255.16 Aligned_cols=184 Identities=32% Similarity=0.421 Sum_probs=154.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
.+|++.+.||+|+||.||+|... +..||+|.++.. ...+.+.+|+.++++++|++++++++++.. .....++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~l 77 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLYI 77 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEc----CCCceEE
Confidence 57888999999999999999875 667999988532 335678999999999999999999987532 2346799
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++++|.+++..... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+|++|||+++
T Consensus 78 v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~ 150 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 150 (256)
T ss_pred EEECCCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccce
Confidence 9999999999999976432 3578899999999999999999999 99999999999999999999999999987
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
...... ....++..|||||++. +.++|+||+||++|+|+
T Consensus 151 ~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~ 193 (256)
T cd05082 151 EASSTQ-----------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 193 (256)
T ss_pred eccccC-----------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHH
Confidence 543211 1123567899999985 46899999999999874
No 243
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.95 E-value=7.7e-28 Score=256.55 Aligned_cols=190 Identities=28% Similarity=0.474 Sum_probs=157.1
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|.+. +++.||+|.++... ...+.+.+|++++++++||||+++++++.. ....+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 77 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTL-----EEPIY 77 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEec-----CCCee
Confidence 356889999999999999999976 45689999986443 345678999999999999999999998543 34689
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++.... ...+++.++..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 78 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~ 150 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGA----GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLA 150 (261)
T ss_pred eeeecccCCcHHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceE
Confidence 9999999999999997643 14688999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........ ...+..++..|+|||++. +.++|+|||||+++||+
T Consensus 151 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 198 (261)
T cd05068 151 RVIKEDIYE-------AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIV 198 (261)
T ss_pred EEccCCccc-------ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHH
Confidence 876432111 111223456899999874 57899999999999873
No 244
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.95 E-value=8.8e-28 Score=255.30 Aligned_cols=189 Identities=21% Similarity=0.338 Sum_probs=161.5
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|+..+.||+|+||.||.++...+++.||+|.+.... ....+.+.+|++++++++|+||+++++++.. .+..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD-----DNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec-----CCeEE
Confidence 4788999999999999999999999999999987543 3445678899999999999999999999643 45789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 76 ~~~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQKG----QLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred EEEEecCCCcHHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcce
Confidence 99999999999999976421 4678999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+....... ......||+.|+|||+.. +.++|+||+||++++|+
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~ 195 (256)
T cd08221 149 KILGSEYS--------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELL 195 (256)
T ss_pred EEcccccc--------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHH
Confidence 86543221 112356899999999984 46799999999999874
No 245
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.95 E-value=7.5e-28 Score=259.41 Aligned_cols=196 Identities=27% Similarity=0.436 Sum_probs=159.0
Q ss_pred hcccccCcccCCccEEEEEEEEC-----CCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILG-----DDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.+|...+.||+|+||.||+|+.. .++..||+|.+........+.+.+|++++++++|+||+++++++.. .
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTE-----G 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEec-----C
Confidence 46788899999999999999753 3567899999876555566789999999999999999999998644 3
Q ss_pred ceEeEEEecccCCCHHHHHhccCCc---------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQ---------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 850 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~ 850 (914)
...++||||+++++|.+++...+.. .....+++..++.++.|++.|++|||+. +|+||||||+||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~ 156 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVG 156 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEc
Confidence 4689999999999999999764321 0113578899999999999999999998 999999999999999
Q ss_pred CCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 851 YDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 851 ~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++.+||+|||+++........ .......+++.|+|||++. +.++|+|||||+++||+
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 218 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDYY------RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIF 218 (280)
T ss_pred CCCCEEECCCCceeEcCCCcee------ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHH
Confidence 9999999999999755322110 0111234678899999884 47899999999999874
No 246
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.95 E-value=8.3e-28 Score=256.44 Aligned_cols=188 Identities=26% Similarity=0.447 Sum_probs=150.0
Q ss_pred CcccCCccEEEEEEEECC---CcEEEEEEEeecc-CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGD---DEMVVAVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||.||+|++.. .+..||+|.+... .....+.+.+|+.+++.++||||+++++++... ....++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS----EGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC----CCCcEEEE
Confidence 468999999999998743 3467999988533 233456888999999999999999999976432 23578999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++.... ...++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 77 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 77 PYMKHGDLRNFIRSET-----HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDI 148 (262)
T ss_pred ecCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccc
Confidence 9999999999997543 2456778889999999999999998 9999999999999999999999999999865
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.+..... ........++..|+|||.+. +.++|+|||||+++||+
T Consensus 149 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 196 (262)
T cd05058 149 YDKEYYS----VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 196 (262)
T ss_pred cCCccee----ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHH
Confidence 4321100 01112335678899999884 47899999999999874
No 247
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.95 E-value=9.7e-28 Score=256.68 Aligned_cols=193 Identities=24% Similarity=0.432 Sum_probs=159.1
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc---------chHHHHHHHHHHHhcCCCCcceEEeEeecCCC
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG---------ASKSFVSECEALRNIRHRNLIKIITICSSTDF 776 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 776 (914)
+|.+...||+|+||.||+|.+..+++.||+|.+...... ..+.+.+|++++++++||||+++++++..
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 77 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD--- 77 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe---
Confidence 367788999999999999999888999999988643321 12568899999999999999999998543
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEE
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAH 856 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 856 (914)
....++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|
T Consensus 78 --~~~~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 78 --ADHLNIFLEYVPGGSVAALLNNY------GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred --CCccEEEEEecCCCCHHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEE
Confidence 34788999999999999999764 3578888999999999999999998 999999999999999999999
Q ss_pred EecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 857 VGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 857 i~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+|||.++.......... .........|+..|+|||.+. +.++|+||+||++++|+
T Consensus 147 l~dfg~~~~~~~~~~~~~--~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~ 206 (267)
T cd06628 147 ISDFGISKKLEANSLSTK--TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEML 206 (267)
T ss_pred ecccCCCcccccccccCC--ccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHh
Confidence 999999987653221111 111122356899999999984 46899999999999875
No 248
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.95 E-value=4.2e-28 Score=262.01 Aligned_cols=187 Identities=24% Similarity=0.411 Sum_probs=156.3
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|+..+.||+|+||.||+|++..+|+.||+|+++... ......+.+|++++++++||||+++++++ ......+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVL-----HSDKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHh-----ccCCceE
Confidence 4778899999999999999999999999999997432 22345678899999999999999999884 4445789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+|+||++ +++.+++.... ..+++..++.++.||++|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 146 (284)
T cd07839 76 LVFEYCD-QDLKKYFDSCN-----GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLA 146 (284)
T ss_pred EEEecCC-CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchh
Confidence 9999996 58888876543 3588999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+...... .......+++.|+|||++. +.++|+||+||++++|+
T Consensus 147 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~ 194 (284)
T cd07839 147 RAFGIPV--------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA 194 (284)
T ss_pred hccCCCC--------CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHH
Confidence 7653211 1112245789999999874 46799999999999874
No 249
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.95 E-value=5.7e-28 Score=267.51 Aligned_cols=195 Identities=26% Similarity=0.361 Sum_probs=162.8
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc-CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.++|++.+.||+|+||.||+|++..+++.||+|++... ......++.+|+.++++++||||+++++++....+......
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 36899999999999999999999999999999998643 23345678899999999999999999998776665556678
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||++ +++.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 84 ~lv~e~~~-~~l~~~~~~-------~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 84 YIVQELME-TDLYKLIKT-------QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred EEEehhcc-cCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccc
Confidence 99999996 588887754 3588899999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
++........ ........||+.|||||.+. +.++|+||+||++++|+
T Consensus 153 ~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~ 204 (336)
T cd07849 153 ARIADPEHDH-----TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEML 204 (336)
T ss_pred eeeccccccc-----cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHH
Confidence 9865432211 11122357899999999863 46899999999999874
No 250
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.9e-29 Score=256.07 Aligned_cols=188 Identities=22% Similarity=0.299 Sum_probs=160.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~ 779 (914)
..+|....+||+|+||+|..|..+++.+.||||++++. ...+.+.-+.|-++|+--. -|.+++++.+ |+..
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHSc-----FQTm 422 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSC-----FQTM 422 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHH-----hhhh
Confidence 35788999999999999999999999999999999744 2334455667778887764 6678888776 7777
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
+..|+||||+.||+|.-.+.+.+ .+-+..++.+|.+||-||-|||++ +||.||||.+|||+|.+|++||+|
T Consensus 423 DRLyFVMEyvnGGDLMyhiQQ~G------kFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~D 493 (683)
T KOG0696|consen 423 DRLYFVMEYVNGGDLMYHIQQVG------KFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIAD 493 (683)
T ss_pred hheeeEEEEecCchhhhHHHHhc------ccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeee
Confidence 89999999999999999988764 466778899999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchh----hhhhcccCccccccccc
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~ 913 (914)
||+++.-.- .......++|||.|+|||++ ++..+|.||||+.+|||
T Consensus 494 FGmcKEni~--------~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEm 543 (683)
T KOG0696|consen 494 FGMCKENIF--------DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 543 (683)
T ss_pred ccccccccc--------CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHH
Confidence 999985321 12234468999999999998 68999999999999998
No 251
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.95 E-value=9.9e-28 Score=260.12 Aligned_cols=188 Identities=24% Similarity=0.395 Sum_probs=156.7
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
++|+..+.||+|+||.||+|+++.+++.||+|.+..... .....+.+|++++++++||||+++++++. ..+..+
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 79 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIH-----TKKTLT 79 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEe-----cCCeEE
Confidence 578999999999999999999998899999999875432 23356778999999999999999999854 345789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||++ ++|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 80 lv~e~~~-~~L~~~~~~~~-----~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~ 150 (291)
T cd07844 80 LVFEYLD-TDLKQYMDDCG-----GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLA 150 (291)
T ss_pred EEEecCC-CCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccc
Confidence 9999997 49999887643 3678889999999999999999999 9999999999999999999999999998
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+...... .......++..|+|||++. +.++|+||+||++++|+
T Consensus 151 ~~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~ 198 (291)
T cd07844 151 RAKSVPS--------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMA 198 (291)
T ss_pred cccCCCC--------ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHH
Confidence 7542211 0111234788999999884 36789999999999874
No 252
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.95 E-value=2.5e-28 Score=259.77 Aligned_cols=179 Identities=24% Similarity=0.381 Sum_probs=148.7
Q ss_pred CcccCCccEEEEEEEECCCcE-------EEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 711 NMIGQGRFGTVYKGILGDDEM-------VVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~-------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+.||+|+||.||+|+++..+. .||+|.+........+.+.+|+.++++++||||+++++++... ...+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~-----~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG-----DESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC-----CCcE
Confidence 469999999999999865443 4888888655445557888999999999999999999996543 3678
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc--------E
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV--------A 855 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~--------~ 855 (914)
+||||+++|+|.+++...+ ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++. +
T Consensus 76 lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~ 147 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNK-----NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFI 147 (258)
T ss_pred EEEecCCCCcHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceE
Confidence 9999999999999997653 3578889999999999999999999 9999999999999987765 6
Q ss_pred EEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 856 HVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 856 ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|++|||.+...... ....|++.|||||++. +.++|+||+||++|||+
T Consensus 148 ~l~d~g~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~ 199 (258)
T cd05078 148 KLSDPGISITVLPK------------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIF 199 (258)
T ss_pred EecccccccccCCc------------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHH
Confidence 89999988654221 1245888999999985 35799999999999874
No 253
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.95 E-value=1.3e-27 Score=255.15 Aligned_cols=193 Identities=23% Similarity=0.369 Sum_probs=159.7
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-----CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-----KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.+|++.+.||+|+||.||+|++..+++.||+|.+.... ....+.+.+|++++++++||||+++++++.... .
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~---~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPE---E 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCC---C
Confidence 47889999999999999999999899999999885331 223457889999999999999999999864322 2
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++++|.+++... ..+++..+.+++.|++.|+.|||++ +++||||||+||+++.++.++|+|
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~------~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAY------GALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECc
Confidence 4578999999999999998754 3478888999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++........ ........|+..|+|||++. +.++|+|||||++++++
T Consensus 150 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 203 (264)
T cd06653 150 FGASKRIQTICMS-----GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEML 203 (264)
T ss_pred ccccccccccccc-----CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHH
Confidence 9999865321110 11112356899999999985 47899999999999874
No 254
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.95 E-value=6.8e-28 Score=260.69 Aligned_cols=190 Identities=20% Similarity=0.312 Sum_probs=158.9
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc-CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
++|++.+.||+|+||.||+|++..+++.||+|.++.. .......+.+|++++++++||||+++++++.. ....+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFI-----EGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheec-----CCeEE
Confidence 3688899999999999999999989999999998654 22334678899999999999999999998543 45789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++..... ...+++..+..++.|++.|+.|||+.+ +|+||||||+||+++.++.+||+|||++
T Consensus 76 lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~ 150 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGVA---TEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVS 150 (286)
T ss_pred EEEeecCCCCHHHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCc
Confidence 99999999999999875321 136899999999999999999999632 8999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----------hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----------~~~~Di~s~g~~~~~~f 914 (914)
+.+.... .....|++.|+|||++. +.++|+||+||++++|+
T Consensus 151 ~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~ 201 (286)
T cd06622 151 GNLVASL----------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMA 201 (286)
T ss_pred ccccCCc----------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHH
Confidence 7653211 11245889999999984 45789999999999874
No 255
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.95 E-value=8.8e-28 Score=257.19 Aligned_cols=192 Identities=26% Similarity=0.460 Sum_probs=156.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCCc---EEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDE---MVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.++|+..+.||+|+||.||+|+...++ ..||+|.++... ....+.+.+|++++++++||||+++.+++.. .
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 78 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK-----F 78 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc-----C
Confidence 357888999999999999999986544 379999986442 3345678899999999999999999998643 3
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
+..++||||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~d 150 (268)
T cd05063 79 KPAMIITEYMENGALDKYLRDHD-----GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSD 150 (268)
T ss_pred CCcEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECC
Confidence 46899999999999999997543 3588999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
||+++......... ........++.|+|||++. +.++|+|||||++|||
T Consensus 151 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~el 203 (268)
T cd05063 151 FGLSRVLEDDPEGT-----YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEV 203 (268)
T ss_pred Cccceecccccccc-----eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHH
Confidence 99997654321110 0111123456799999885 4789999999999986
No 256
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.95 E-value=1.3e-27 Score=254.64 Aligned_cols=189 Identities=26% Similarity=0.499 Sum_probs=156.0
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++. ++..||+|.++.... ..+++.+|+.++++++|++++++++++.. ...+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~~ 76 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE------EPIY 76 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC------CCcE
Confidence 357889999999999999999876 456799999864433 45678999999999999999999987522 2468
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++..... ..+++.+++.++.|++.|++|||+. +|+||||||+||++++++.+||+|||.+
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~ 149 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEG----RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLA 149 (260)
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceee
Confidence 99999999999999975421 4578999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........ ......++..|+|||+.. +.++|+|||||++++|+
T Consensus 150 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~ 197 (260)
T cd05070 150 RLIEDNEYT-------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELV 197 (260)
T ss_pred eeccCcccc-------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHH
Confidence 865432211 111234667899999985 46899999999999874
No 257
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=8.4e-28 Score=262.69 Aligned_cols=197 Identities=26% Similarity=0.400 Sum_probs=157.3
Q ss_pred hhcccccCcccCCccEEEEEEEECC-------CcEEEEEEEeeccC-CcchHHHHHHHHHHHhc-CCCCcceEEeEeecC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGD-------DEMVVAVKVINLKQ-KGASKSFVSECEALRNI-RHRNLIKIITICSST 774 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 774 (914)
.++|.+.+.||+|+||.||+|++.. +...||+|.++... ......+.+|+++++++ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 3679999999999999999998743 23579999987442 23345788899999999 799999999986543
Q ss_pred CCCCCceEeEEEecccCCCHHHHHhccCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCC
Q 042766 775 DFEGVDFKALVFEYMENGSLEDWLHQSNDQ----------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKP 844 (914)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp 844 (914)
+..++||||+++|+|.+++...+.. .....+++.++++++.|++.|++|||+. +++||||||
T Consensus 97 -----~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 168 (307)
T cd05098 97 -----GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAA 168 (307)
T ss_pred -----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccH
Confidence 4689999999999999999764321 1123588999999999999999999998 999999999
Q ss_pred CCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 845 SNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 845 ~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+||+++.++.+||+|||.++......... ......+++.|||||++. +.++|+||+||++|||+
T Consensus 169 ~Nill~~~~~~kL~dfg~a~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~ 236 (307)
T cd05098 169 RNVLVTEDNVMKIADFGLARDIHHIDYYK------KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 236 (307)
T ss_pred HheEEcCCCcEEECCCcccccccccchhh------ccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999997654221110 011123557899999884 47899999999999874
No 258
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.95 E-value=1.2e-27 Score=258.17 Aligned_cols=203 Identities=23% Similarity=0.318 Sum_probs=165.8
Q ss_pred CHHHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeecC
Q 042766 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSST 774 (914)
Q Consensus 696 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 774 (914)
+..++....+.|++.+.||+|+||.||+|++..+++.||+|++.... ....++..|+.+++++ +||||+++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 44455556789999999999999999999999899999999986443 2345788899999998 699999999987533
Q ss_pred CC-CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC
Q 042766 775 DF-EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM 853 (914)
Q Consensus 775 ~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~ 853 (914)
.. ......++||||+++|+|.+++...+. ..+++..++.++.|++.|++|||+. +|+|||+||+||+++.++
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKG----NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENA 158 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 21 234578999999999999999876432 3577888899999999999999999 999999999999999999
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccccC
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~~f 914 (914)
.++|+|||+++...... .......|++.|+|||++. +.++|+||+||+++||+
T Consensus 159 ~~~l~dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~ 220 (282)
T cd06636 159 EVKLVDFGVSAQLDRTV--------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMA 220 (282)
T ss_pred CEEEeeCcchhhhhccc--------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHH
Confidence 99999999987543211 1112356999999999873 35799999999999874
No 259
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.95 E-value=1.2e-27 Score=256.00 Aligned_cols=188 Identities=24% Similarity=0.359 Sum_probs=147.8
Q ss_pred CcccCCccEEEEEEEECCC--cEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEe
Q 042766 711 NMIGQGRFGTVYKGILGDD--EMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFE 787 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~--~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 787 (914)
+.||+|+||.||+|+...+ ...+++|.+.... ....+.+.+|+.+++.++||||+++++++.. ....++|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-----~~~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-----AIPYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecC-----CCccEEEEe
Confidence 3699999999999976433 3456677765433 3345789999999999999999999998653 346899999
Q ss_pred cccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccc
Q 042766 788 YMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867 (914)
Q Consensus 788 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~ 867 (914)
|+++|+|.+++.+.... ....++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 76 ~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~ 150 (268)
T cd05086 76 YCELGDLKSYLSQEQWH--RRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRY 150 (268)
T ss_pred cCCCCcHHHHHHhhhcc--cccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccC
Confidence 99999999999764321 23466777889999999999999998 99999999999999999999999999986432
Q ss_pred ccccccccCCCCccccccCcccccccchhh-----------hhhcccCcccccccccC
Q 042766 868 NHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----------~~~~Di~s~g~~~~~~f 914 (914)
.... ........|+..|+|||++. +.++|+|||||+++||+
T Consensus 151 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~ 202 (268)
T cd05086 151 KEDY------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELF 202 (268)
T ss_pred cchh------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHH
Confidence 1110 01112356889999999873 36799999999999874
No 260
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.95 E-value=1.4e-27 Score=253.87 Aligned_cols=183 Identities=27% Similarity=0.417 Sum_probs=149.9
Q ss_pred cccCCccEEEEEEEE--CCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEe
Q 042766 712 MIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFE 787 (914)
Q Consensus 712 ~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 787 (914)
.||+|+||.||+|++ ..++..||+|+++.... ...+.+.+|+.++++++||||+++++++.. +..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA------ESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC------CCcEEEEe
Confidence 589999999999975 45678999999864432 234678999999999999999999998532 24689999
Q ss_pred cccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccc
Q 042766 788 YMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867 (914)
Q Consensus 788 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~ 867 (914)
|+++|+|.+++... ..+++..+.+++.|++.|++|+|++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 76 LAELGPLNKFLQKN------KHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred cCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccC
Confidence 99999999999754 3588899999999999999999998 99999999999999999999999999998654
Q ss_pred ccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 868 NHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
...... .......+++.|||||.+. +.++|+|||||++|||+
T Consensus 147 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 192 (257)
T cd05116 147 ADENYY-----KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAF 192 (257)
T ss_pred CCCCee-----eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHH
Confidence 322110 0111234568999999874 46899999999999874
No 261
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.95 E-value=9.8e-28 Score=261.59 Aligned_cols=191 Identities=27% Similarity=0.444 Sum_probs=155.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcE----EEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEM----VVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
..+|+..+.||+|+||.||+|++..+++ .||+|.+..... .....+.+|+.++++++||||++++++|...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~---- 81 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP---- 81 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC----
Confidence 3578888999999999999999876665 578888764332 2234788999999999999999999987432
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
..++|+||+++|+|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+
T Consensus 82 --~~~~v~e~~~~g~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~ 151 (303)
T cd05110 82 --TIQLVTQLMPHGCLLDYVHEHK-----DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKIT 151 (303)
T ss_pred --CceeeehhcCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEc
Confidence 3568999999999999987643 3578889999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||+++........ .......++..|||||++. +.++|+|||||++|||+
T Consensus 152 Dfg~~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~ 205 (303)
T cd05110 152 DFGLARLLEGDEKE------YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 205 (303)
T ss_pred cccccccccCcccc------cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHH
Confidence 99999866432211 0111234678899999884 47899999999999863
No 262
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.95 E-value=1.1e-27 Score=259.06 Aligned_cols=188 Identities=26% Similarity=0.382 Sum_probs=160.6
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH-----GSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec-----CCeeE
Confidence 4788899999999999999999889999999997544 3345688999999999999999999998543 45789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+ +++|.+++.... ..+++.+++.++.|++.|++|||+. +|+|+||||+||+++.++.++++|||++
T Consensus 76 ~v~e~~-~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~ 146 (286)
T cd07832 76 LVMEYM-PSDLSEVLRDEE-----RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLA 146 (286)
T ss_pred EEeccc-CCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeec
Confidence 999999 999999987543 4689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+....... .......||..|+|||++. +.++|+||+||+++||+
T Consensus 147 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~ 195 (286)
T cd07832 147 RLFSEEEP-------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELL 195 (286)
T ss_pred ccccCCCC-------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHH
Confidence 86543221 1112346899999999974 47899999999999874
No 263
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.95 E-value=9.9e-28 Score=255.32 Aligned_cols=176 Identities=26% Similarity=0.450 Sum_probs=148.3
Q ss_pred CcccCCccEEEEEEEECCCc----------EEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 711 NMIGQGRFGTVYKGILGDDE----------MVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
+.||+|+||.||+|++..++ ..||+|.+...... ...+.+|+.++++++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec------C
Confidence 46899999999999998666 45788877544333 6788999999999999999999998754 2
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC-------
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM------- 853 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~------- 853 (914)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~ 145 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREK-----NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVP 145 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCce
Confidence 4689999999999999998653 2688899999999999999999998 999999999999999887
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhh------hhhcccCccccccccc
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~~~~~~ 913 (914)
.+|++|||+++..... ....++..|+|||++. +.++|+||+||+++|+
T Consensus 146 ~~kl~Dfg~a~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l 199 (259)
T cd05037 146 FIKLSDPGIPITVLSR------------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEI 199 (259)
T ss_pred eEEeCCCCcccccccc------------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHH
Confidence 7999999999864321 1235777899999974 3589999999999886
No 264
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.95 E-value=1.1e-27 Score=260.65 Aligned_cols=187 Identities=26% Similarity=0.402 Sum_probs=157.5
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc-----chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG-----ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
+|+..+.||+|+||.||+|++..+++.||||.++..... ....+.+|++++++++|+||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH-----KS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-----CC
Confidence 477788999999999999999988999999999754322 23467789999999999999999998644 45
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+ +|+|.+++.... ..+++..++.++.|+++||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~df 146 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKS-----IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADF 146 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccc
Confidence 789999999 899999997642 2688999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+++....... ......+++.|+|||.+. +.++|+|||||+++||+
T Consensus 147 g~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~ 197 (298)
T cd07841 147 GLARSFGSPNR--------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELL 197 (298)
T ss_pred eeeeeccCCCc--------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 99986543211 111235788999999884 36799999999999874
No 265
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.95 E-value=5.2e-28 Score=262.09 Aligned_cols=186 Identities=24% Similarity=0.339 Sum_probs=157.7
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALV 785 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 785 (914)
.|.....||+|+||.||+|.+..++..||||.+........+.+.+|+.++++++||||+++++.+.. .+..++|
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-----~~~~~lv 97 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLV-----GDELWVV 97 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheec-----CCeEEEE
Confidence 34445679999999999999988899999999876555556788999999999999999999988543 4578999
Q ss_pred EecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 786 FEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 786 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
|||+++++|.+++.. ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 98 ~e~~~~~~L~~~~~~-------~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (292)
T cd06658 98 MEFLEGGALTDIVTH-------TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQ 167 (292)
T ss_pred EeCCCCCcHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhh
Confidence 999999999998854 2478889999999999999999999 999999999999999999999999999875
Q ss_pred ccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 866 LSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
..... .......||+.|+|||++. +.++|+||+||+++||+
T Consensus 168 ~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~ 212 (292)
T cd06658 168 VSKEV--------PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMI 212 (292)
T ss_pred ccccc--------ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 43221 1112346899999999984 58899999999999874
No 266
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.95 E-value=1.6e-27 Score=257.69 Aligned_cols=188 Identities=23% Similarity=0.350 Sum_probs=158.3
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|+..+.||+|+||.||+|+++.+++.||+|++.... ....+.+.+|++++++++||||+++++++.. ....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR-----KRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee-----CCEE
Confidence 36888899999999999999999899999999986432 2234568899999999999999999998543 4478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||++++.+..++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~v~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 76 HLVFEYCDHTVLNELEKNP------RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred EEEEeccCccHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECcccc
Confidence 9999999998888877543 3588999999999999999999998 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+........ ......|+..|+|||++. +.++|+||+||++++|+
T Consensus 147 ~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~ 195 (286)
T cd07847 147 ARILTGPGD--------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELL 195 (286)
T ss_pred ceecCCCcc--------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHH
Confidence 986543211 111245889999999975 36799999999999874
No 267
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.95 E-value=1.2e-27 Score=259.41 Aligned_cols=189 Identities=26% Similarity=0.414 Sum_probs=156.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
..+|.+.+.||+|+||.||+|++..+++.||+|++.... ......+.+|++++++++|+||+++++++. .....
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-----~~~~~ 78 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIH-----TKETL 78 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEe-----cCCeE
Confidence 468999999999999999999999899999999986543 233456789999999999999999999854 33478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||++ +++.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~ 149 (291)
T cd07870 79 TFVFEYMH-TDLAQYMIQHP-----GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGL 149 (291)
T ss_pred EEEEeccc-CCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEecccc
Confidence 99999995 68887775432 3467788889999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
++....... ......+++.|+|||++. +.++|+||+||++++|+
T Consensus 150 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~ 198 (291)
T cd07870 150 ARAKSIPSQ--------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEML 198 (291)
T ss_pred ccccCCCCC--------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHH
Confidence 975432110 112245789999999874 35789999999999874
No 268
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.95 E-value=2e-27 Score=255.98 Aligned_cols=190 Identities=26% Similarity=0.436 Sum_probs=156.5
Q ss_pred hcccccCcccCCccEEEEEEEECCCcE----EEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEM----VVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.+|++.+.||+|+||+||+|.+..+++ .||+|....... .....+.+|++++++++||||+++++++..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 578889999999999999999865553 689998764432 334678899999999999999999998754
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++|+|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~d 152 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNHK-----DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITD 152 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECC
Confidence 36789999999999999997653 3588999999999999999999998 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||.++......... ......++..|+|||.+. +.++|+||+||+++|++
T Consensus 153 fg~~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~ 205 (279)
T cd05057 153 FGLAKLLDVDEKEY------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELM 205 (279)
T ss_pred CcccccccCcccce------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHh
Confidence 99998764321110 011223467899999884 47899999999998863
No 269
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.95 E-value=6.6e-28 Score=261.96 Aligned_cols=186 Identities=23% Similarity=0.327 Sum_probs=158.2
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALV 785 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 785 (914)
.|+....||+|+||.||+|++..+++.||+|.+........+.+.+|+.+++.++||||+++++++.. .+..++|
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~~~~iv 96 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLV-----GEELWVL 96 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheee-----CCeEEEE
Confidence 34455689999999999999988899999999976555556788899999999999999999998543 4578999
Q ss_pred EecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 786 FEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 786 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
|||+++++|.+++.. ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 97 ~e~~~~~~L~~~~~~-------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~ 166 (297)
T cd06659 97 MEFLQGGALTDIVSQ-------TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQ 166 (297)
T ss_pred EecCCCCCHHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhh
Confidence 999999999998754 3578899999999999999999999 999999999999999999999999999875
Q ss_pred ccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 866 LSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
..... .......|+..|+|||++. +.++|+||+||+++||+
T Consensus 167 ~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 211 (297)
T cd06659 167 ISKDV--------PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMV 211 (297)
T ss_pred ccccc--------ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 43221 1112356899999999985 47899999999999874
No 270
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.95 E-value=9.2e-28 Score=256.84 Aligned_cols=192 Identities=24% Similarity=0.408 Sum_probs=160.5
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|++.+.||+|+||.||+|++..+++.||||.+...+ .....++.+|+++++.++||||+++++++.. .+.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-----DNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe-----CCe
Confidence 46888899999999999999998899999999886432 2334578899999999999999999998643 347
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++++|.+++..... ....+++.+++.++.|++.|++|||++ +++|+||||+||+++.++.++++|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKK--QKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcch
Confidence 8999999999999999874321 124688999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++....... ......|+..|+|||++. +.++|+||+||++++|+
T Consensus 152 ~~~~~~~~~~--------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~ 200 (267)
T cd08229 152 LGRFFSSKTT--------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA 200 (267)
T ss_pred hhhccccCCc--------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHH
Confidence 9886543221 112346899999999984 46899999999999873
No 271
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.95 E-value=1.7e-27 Score=254.70 Aligned_cols=192 Identities=26% Similarity=0.428 Sum_probs=161.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|++.+.||+|+||.||+|.+..+++.||+|.++... ....+.+.+|++++++++|++|+++++++.. .+.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~-----~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE-----NNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec-----CCe
Confidence 47889999999999999999999899999999886432 2335688999999999999999999998543 347
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++++|.+++..... ....+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.++|+|||
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKK--QKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcc--cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccc
Confidence 8999999999999999865321 124578999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++....... ......|++.|+|||.+. +.++|+||+||++++|+
T Consensus 152 ~~~~~~~~~~--------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~ 200 (267)
T cd08224 152 LGRFFSSKTT--------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA 200 (267)
T ss_pred eeeeccCCCc--------ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHH
Confidence 9876543211 112346899999999985 46799999999998874
No 272
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.95 E-value=2.1e-27 Score=252.96 Aligned_cols=190 Identities=31% Similarity=0.515 Sum_probs=157.8
Q ss_pred CcccCCccEEEEEEEECCC---cEEEEEEEeeccCCc-chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGDD---EMVVAVKVINLKQKG-ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||.||+|++... +..||+|++...... ..+.+.+|++.++.++|+||+++++++.. ....++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE-----EEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC-----CCceEEEE
Confidence 4699999999999999865 889999999754433 36788999999999999999999998644 45789999
Q ss_pred ecccCCCHHHHHhccCCc---ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 787 EYMENGSLEDWLHQSNDQ---VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~---~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
||+++++|.+++...... .....+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccc
Confidence 999999999999864210 0025689999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+....... ........+++.|+|||.+. +.++|+||+||++|+|+
T Consensus 153 ~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 201 (262)
T cd00192 153 RDVYDDDY------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIF 201 (262)
T ss_pred cccccccc------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHH
Confidence 87654321 01122356889999999984 58899999999999873
No 273
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=1.8e-27 Score=260.97 Aligned_cols=197 Identities=26% Similarity=0.421 Sum_probs=156.5
Q ss_pred hhcccccCcccCCccEEEEEEEEC-------CCcEEEEEEEeeccC-CcchHHHHHHHHHHHhc-CCCCcceEEeEeecC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILG-------DDEMVVAVKVINLKQ-KGASKSFVSECEALRNI-RHRNLIKIITICSST 774 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 774 (914)
.++|.+.+.||+|+||.||+|++. .....||+|.++... ......+.+|+++++++ +||||+++++++..
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 89 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ- 89 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc-
Confidence 368889999999999999999863 234679999986432 23345788999999999 69999999998643
Q ss_pred CCCCCceEeEEEecccCCCHHHHHhccCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCC
Q 042766 775 DFEGVDFKALVFEYMENGSLEDWLHQSNDQ----------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKP 844 (914)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp 844 (914)
....++||||+++|+|.+++...... .....+++.++.+++.|++.|++|||++ +|+||||||
T Consensus 90 ----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 162 (314)
T cd05099 90 ----EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAA 162 (314)
T ss_pred ----CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeeccccc
Confidence 34689999999999999999764311 1124588999999999999999999998 999999999
Q ss_pred CCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 845 SNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 845 ~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+||+++.++.+||+|||+++......... ......++..|||||++. +.++|+|||||++++|+
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~ 230 (314)
T cd05099 163 RNVLVTEDNVMKIADFGLARGVHDIDYYK------KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIF 230 (314)
T ss_pred eeEEEcCCCcEEEcccccccccccccccc------ccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHH
Confidence 99999999999999999998654321110 011123456899999984 46899999999999864
No 274
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.95 E-value=1.3e-27 Score=255.90 Aligned_cols=191 Identities=20% Similarity=0.323 Sum_probs=158.9
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC------cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK------GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
+|+..+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++++. ..
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC-----ED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec-----cC
Confidence 47788999999999999999988999999999974331 13467889999999999999999999854 34
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC-cEEEe
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM-VAHVG 858 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~-~~ki~ 858 (914)
+..++||||+++++|.+++.+. ..+++..+..++.|++.|+.|||++ +++||||||+||+++.++ .+||+
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKY------GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEc
Confidence 5789999999999999999754 3578889999999999999999999 999999999999998776 69999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||.+.......... ........||..|+|||++. +.++|+||+||++++++
T Consensus 147 dfg~~~~~~~~~~~~----~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~ 202 (268)
T cd06630 147 DFGAAARLAAKGTGA----GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMA 202 (268)
T ss_pred ccccccccccccccC----CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHH
Confidence 999998765432111 11122356899999999874 47899999999998863
No 275
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.95 E-value=4.2e-29 Score=242.91 Aligned_cols=187 Identities=24% Similarity=0.314 Sum_probs=150.8
Q ss_pred ccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 709 SSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 709 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
....||.|+||+|++..++.+|+..|||+++... ....+++..|.+...+- +.||||++||.+... +..|+.|
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~E-----GdcWiCM 142 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSE-----GDCWICM 142 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcC-----CceeeeH
Confidence 3467999999999999999999999999998554 45677899999875554 689999999986432 2579999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
|.|+ -++..+.+.-. ......+++.-.-+|+.-.+.||.||.+.. .|||||+||+|||++..|.+|++|||.+..+
T Consensus 143 ELMd-~SlDklYk~vy-~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqL 218 (361)
T KOG1006|consen 143 ELMD-ISLDKLYKRVY-SVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQL 218 (361)
T ss_pred HHHh-hhHHHHHHHHH-HHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhH
Confidence 9994 57776654321 122356788888888888999999998774 8999999999999999999999999999766
Q ss_pred cccccccccCCCCccccccCcccccccchh------hhhhcccCccccccccc
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKF------FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~------~~~~~Di~s~g~~~~~~ 913 (914)
.+... .+.-+|-..|||||.+ ++.++|+||+|+|+||.
T Consensus 219 v~SiA---------kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~Ev 262 (361)
T KOG1006|consen 219 VDSIA---------KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEV 262 (361)
T ss_pred HHHHH---------hhhccCCccccChhccCCccCCcchhhhhhhhcceEeee
Confidence 44221 1124688999999999 46899999999999984
No 276
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.95 E-value=1.5e-27 Score=258.45 Aligned_cols=195 Identities=24% Similarity=0.361 Sum_probs=155.2
Q ss_pred cccccCcccCCccEEEEEEEECC-----CcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGD-----DEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
+|++.+.||+|+||.||+|+... ....+|+|.+..... ...+++.+|+.++++++||||+++++.+...
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQD----- 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC-----
Confidence 47788999999999999998743 335789998864332 2346788999999999999999999986433
Q ss_pred ceEeEEEecccCCCHHHHHhccCCc------------------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecC
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQ------------------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGD 841 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrD 841 (914)
+..++||||+++|+|.+++...... .....+++..++.++.|++.|++|||+. +|+|||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~d 152 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRD 152 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhh
Confidence 4678999999999999998753211 1123588999999999999999999998 999999
Q ss_pred CCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 842 LKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 842 lkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||+||++++++.+||+|||+++........ .......++..|+|||++. +.++|+|||||+++||+
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~ 223 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEEDSY------VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 223 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCccch------hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHH
Confidence 9999999999999999999999865322111 0111234677899999874 58899999999999874
No 277
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.95 E-value=1.8e-27 Score=255.59 Aligned_cols=198 Identities=23% Similarity=0.318 Sum_probs=164.3
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCC-CCCc
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSSTDF-EGVD 780 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~-~~~~ 780 (914)
..++|++.+.||+|+||.||+|++..+++.||+|++..... ..+.+.+|+++++++ +|+||+++++++..... ....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 45789999999999999999999988899999999875433 446789999999999 69999999999765442 3345
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++++|.+++..... ....+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++||
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~ 157 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRK--KGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDF 157 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCC
Confidence 68999999999999998865321 124688999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~~f 914 (914)
|++....... .......|++.|+|||++. +.++|+||+||++++|+
T Consensus 158 ~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~ 212 (275)
T cd06608 158 GVSAQLDSTL--------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELA 212 (275)
T ss_pred ccceecccch--------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHH
Confidence 9987653221 1112346899999999873 35799999999999874
No 278
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.95 E-value=1.4e-27 Score=256.56 Aligned_cols=195 Identities=21% Similarity=0.359 Sum_probs=158.2
Q ss_pred hcccccCcccCCccEEEEEEEECC-----CcEEEEEEEeeccCCc-chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGD-----DEMVVAVKVINLKQKG-ASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
++|+..+.||+|+||.||+|+.+. +.+.||+|.+...... ..+.+.+|++++++++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCRE----- 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECC-----
Confidence 578889999999999999999753 3467999988654433 45689999999999999999999998643
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcc---cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcE
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQV---EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVA 855 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~---~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 855 (914)
....++||||+++|+|.+++....... ....+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~ 156 (275)
T cd05046 80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREV 156 (275)
T ss_pred CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcE
Confidence 346799999999999999997653211 012589999999999999999999999 99999999999999999999
Q ss_pred EEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 856 HVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 856 ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++|||+++....... .......++..|+|||... +.++|+||+||++++||
T Consensus 157 ~l~~~~~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~ 212 (275)
T cd05046 157 KVSLLSLSKDVYNSEY-------YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVF 212 (275)
T ss_pred EEcccccccccCcccc-------cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHH
Confidence 9999999875432111 1112335778899999874 47799999999999874
No 279
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.95 E-value=1.9e-27 Score=252.83 Aligned_cols=186 Identities=25% Similarity=0.374 Sum_probs=154.1
Q ss_pred CcccCCccEEEEEEEECC-C--cEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGD-D--EMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~-~--~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|++|.||+|++.. . ...||||.+..... ...+.+.+|++++++++||||+++++++.. ...++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEEE
Confidence 468999999999999854 2 34699999976554 456789999999999999999999998543 4789999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++++|.+++..... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++.+
T Consensus 75 e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~ 147 (257)
T cd05040 75 ELAPLGSLLDRLRKDAL----GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRAL 147 (257)
T ss_pred EecCCCcHHHHHHhccc----ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccc
Confidence 99999999999976531 3688999999999999999999999 9999999999999999999999999999876
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
...... ........++..|+|||++. +.++|+|||||+++||+
T Consensus 148 ~~~~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~ 194 (257)
T cd05040 148 PQNEDH-----YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMF 194 (257)
T ss_pred cccccc-----eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHH
Confidence 432211 00111345788999999874 47899999999999884
No 280
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.95 E-value=1.9e-27 Score=259.67 Aligned_cols=195 Identities=22% Similarity=0.266 Sum_probs=158.7
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
+|+..+.||+|+||.||+|++..+++.||+|.+.... ....+.+.+|+++++.++||||+++++.+. ..++.
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~ 76 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE-----TKRHL 76 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe-----cCCEE
Confidence 6888999999999999999999999999999987443 233457889999999999999999998854 34578
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||++|++|.+++... ..+++..+..++.|++.|++|+|+. +++||||||+||+++.++.+|++|||+
T Consensus 77 ~lv~e~~~g~~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~ 147 (305)
T cd05609 77 CMVMEYVEGGDCATLLKNI------GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGL 147 (305)
T ss_pred EEEEecCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCC
Confidence 9999999999999999754 3578889999999999999999998 999999999999999999999999999
Q ss_pred cccccccccc-------cccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLD-------IASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~-------~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++........ .............|+..|+|||++. +.++|+|||||+++||+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~ 210 (305)
T cd05609 148 SKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFL 210 (305)
T ss_pred ccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHH
Confidence 8742111000 0000001112346889999999874 58899999999999873
No 281
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=6.3e-28 Score=257.58 Aligned_cols=187 Identities=26% Similarity=0.352 Sum_probs=160.1
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--------CcchHHHHHHHHHHHhcC---CCCcceEEeE
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--------KGASKSFVSECEALRNIR---HRNLIKIITI 770 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---h~niv~l~~~ 770 (914)
...++|+..+.+|+|+||.|+.|.++.....|+||.+.+++ ....-..--||.+|+.++ |+||++++.+
T Consensus 558 ~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf 637 (772)
T KOG1152|consen 558 KKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF 637 (772)
T ss_pred cccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe
Confidence 34567999999999999999999999889999999996432 111123456999999997 9999999999
Q ss_pred eecCCCCCCceEeEEEecc-cCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee
Q 042766 771 CSSTDFEGVDFKALVFEYM-ENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 849 (914)
Q Consensus 771 ~~~~~~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl 849 (914)
|++.++.|++||-. +|-+|.++|..+ ..+++.++.-|++||+.|+++||++ +|||||||-||+.+
T Consensus 638 -----FEddd~yyl~te~hg~gIDLFd~IE~k------p~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenviv 703 (772)
T KOG1152|consen 638 -----FEDDDYYYLETEVHGEGIDLFDFIEFK------PRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIV 703 (772)
T ss_pred -----eecCCeeEEEecCCCCCcchhhhhhcc------CccchHHHHHHHHHHHhcccccccc---CceecccccccEEE
Confidence 77778999999975 567999999876 4688999999999999999999999 99999999999999
Q ss_pred cCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccc
Q 042766 850 DYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVH 912 (914)
Q Consensus 850 ~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~ 912 (914)
+.+|-+|++|||.|...+....+ .++||..|.|||++. |...|||++|+.+|.
T Consensus 704 d~~g~~klidfgsaa~~ksgpfd----------~f~gtv~~aapevl~g~~y~gk~qdiwalgillyt 761 (772)
T KOG1152|consen 704 DSNGFVKLIDFGSAAYTKSGPFD----------VFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYT 761 (772)
T ss_pred ecCCeEEEeeccchhhhcCCCcc----------eeeeeccccchhhhCCCccCCCcchhhhhhheeeE
Confidence 99999999999999876543322 478999999999995 588999999999885
No 282
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.95 E-value=2.6e-27 Score=251.80 Aligned_cols=184 Identities=26% Similarity=0.402 Sum_probs=150.6
Q ss_pred CcccCCccEEEEEEEECCCc---EEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGDDE---MVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||.||+|++..++ ..||+|.+..... ...+++.+|++++++++||||+++++++.. ...++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG------EPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC------CceEEEE
Confidence 46999999999999886544 7899999874433 245678999999999999999999998532 2468999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 75 e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~ 145 (257)
T cd05060 75 ELAPLGPLLKYLKKR------REIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRAL 145 (257)
T ss_pred EeCCCCcHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEecccccccee
Confidence 999999999999764 2578999999999999999999999 9999999999999999999999999999866
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
...... ........++..|+|||.+. +.++|+|||||++++|+
T Consensus 146 ~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~ 192 (257)
T cd05060 146 GAGSDY-----YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAF 192 (257)
T ss_pred ecCCcc-----cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHH
Confidence 432211 01111223457899999984 47899999999999873
No 283
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.95 E-value=1.9e-27 Score=256.41 Aligned_cols=199 Identities=22% Similarity=0.341 Sum_probs=160.5
Q ss_pred HhhcccccCcccCCccEEEEEEEECC----CcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGD----DEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFE 777 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 777 (914)
..++|++.+.||+|+||.||+|.+.. ++..||+|++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--- 80 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED--- 80 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---
Confidence 34688999999999999999999875 36889999886332 33456788999999999999999999987532
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCc--ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcE
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQ--VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVA 855 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~--~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 855 (914)
....++++||+++++|.+++...+.. .....+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 81 -~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~ 156 (280)
T cd05043 81 -GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQV 156 (280)
T ss_pred -CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcE
Confidence 34678999999999999998764321 1124688999999999999999999998 99999999999999999999
Q ss_pred EEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 856 HVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 856 ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+|||+++.+........ .....++..|+|||++. +.++||||+||+++|++
T Consensus 157 kl~d~g~~~~~~~~~~~~~------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~ 213 (280)
T cd05043 157 KITDNALSRDLFPMDYHCL------GDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELM 213 (280)
T ss_pred EECCCCCcccccCCceEEe------CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHh
Confidence 9999999986543221100 01234677899999984 47899999999999874
No 284
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.95 E-value=1.6e-27 Score=258.14 Aligned_cols=197 Identities=25% Similarity=0.430 Sum_probs=157.8
Q ss_pred hhcccccCcccCCccEEEEEEEECC-----CcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGD-----DEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFE 777 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 777 (914)
..+|++.+.||+|+||.||+|++.. ++..||+|++..... ...+.+.+|++++++++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~---- 79 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAV---- 79 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC----
Confidence 3578999999999999999999743 578899999864432 234678899999999999999999998643
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCc----------------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecC
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQ----------------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGD 841 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrD 841 (914)
....++||||+++|+|.+++...... .....+++.+++.++.|++.|++|+|++ +++|||
T Consensus 80 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~d 155 (288)
T cd05050 80 -GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRD 155 (288)
T ss_pred -CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceeccc
Confidence 34679999999999999999753211 1123578889999999999999999999 999999
Q ss_pred CCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 842 LKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 842 lkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||+||+++.++.+||+|||+++........ .......++..|+|||++. +.++|+|||||+++||+
T Consensus 156 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 226 (288)
T cd05050 156 LATRNCLVGENMVVKIADFGLSRNIYSADYY------KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 226 (288)
T ss_pred ccHhheEecCCCceEECccccceecccCccc------cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHH
Confidence 9999999999999999999998754322110 0111223567899999875 47899999999999874
No 285
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.95 E-value=5e-27 Score=253.61 Aligned_cols=194 Identities=25% Similarity=0.394 Sum_probs=159.4
Q ss_pred hcccccCcccCCccEEEEEEEECC----CcEEEEEEEeeccCCc-chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGD----DEMVVAVKVINLKQKG-ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
++|+..+.||+|+||.||+|++.. +++.||||++...... ..+.+.+|++++++++||||+++++++... ..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~---~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKP---GG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecC---CC
Confidence 467788999999999999999753 4789999999755443 457899999999999999999999986432 24
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++++|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|++|
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~-----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 152 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR-----DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISD 152 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc-----cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcc
Confidence 46899999999999999997653 3588999999999999999999998 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||.+........... ......++..|+|||... +.++|+|||||+++||+
T Consensus 153 fg~~~~~~~~~~~~~-----~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~ 206 (284)
T cd05038 153 FGLAKVLPEDKDYYY-----VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELF 206 (284)
T ss_pred cccccccccCCccee-----ccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheee
Confidence 999987653211100 111234566799999884 47899999999999985
No 286
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.95 E-value=7.8e-28 Score=246.59 Aligned_cols=186 Identities=26% Similarity=0.383 Sum_probs=156.6
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC--CCC----cceEEeEeecCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR--HRN----LIKIITICSSTDFE 777 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~n----iv~l~~~~~~~~~~ 777 (914)
..+|.+...+|+|+||.|.+|.++.++..||+|+++.- ....++..-|+++++++. -|+ +|++.++ |+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~w-----Fd 161 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDW-----FD 161 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehh-----hh
Confidence 67899999999999999999999999999999999632 234567788999999994 232 6677666 66
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC------
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY------ 851 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~------ 851 (914)
-.++.++|+|.+ |-++.++++.... .+++..++..+++|++++++|||+. +++|-||||||||+.+
T Consensus 162 yrghiCivfell-G~S~~dFlk~N~y----~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 162 YRGHICIVFELL-GLSTFDFLKENNY----IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred ccCceEEEEecc-ChhHHHHhccCCc----cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEE
Confidence 667899999998 7799999987643 6899999999999999999999999 9999999999999832
Q ss_pred --------------CCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 852 --------------DMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 852 --------------~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
+..+||+|||-|++-.+.+ ...+.|..|.|||++. +.++|+||+||+++|+
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~El 302 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-----------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVEL 302 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccCc-----------ceeeeccccCCchheeccCcCCccCceeeeeEEEEe
Confidence 2358999999998754332 2467899999999995 5999999999999997
Q ss_pred C
Q 042766 914 F 914 (914)
Q Consensus 914 f 914 (914)
|
T Consensus 303 y 303 (415)
T KOG0671|consen 303 Y 303 (415)
T ss_pred e
Confidence 5
No 287
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=2.4e-27 Score=262.25 Aligned_cols=196 Identities=26% Similarity=0.411 Sum_probs=156.6
Q ss_pred hcccccCcccCCccEEEEEEEECC-------CcEEEEEEEeeccC-CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGD-------DEMVVAVKVINLKQ-KGASKSFVSECEALRNI-RHRNLIKIITICSSTD 775 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 775 (914)
.+|++.+.||+|+||.||+|++.. .+..||+|.++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-- 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc--
Confidence 478999999999999999998642 23478999886432 23346789999999999 79999999998643
Q ss_pred CCCCceEeEEEecccCCCHHHHHhccCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCC
Q 042766 776 FEGVDFKALVFEYMENGSLEDWLHQSNDQ----------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPS 845 (914)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~ 845 (914)
....++||||+++|+|.+++...... .....+++.+++.++.|++.|++|||++ +|+||||||+
T Consensus 90 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~ 163 (334)
T cd05100 90 ---DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAAR 163 (334)
T ss_pred ---CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccccc
Confidence 34689999999999999999754311 1224588899999999999999999998 9999999999
Q ss_pred CeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 846 NVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 846 NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++.++.+||+|||+++........ .......++..|||||++. +.++|+|||||+++||+
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 230 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIF 230 (334)
T ss_pred eEEEcCCCcEEECCcccceeccccccc------ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHH
Confidence 999999999999999999865432111 0111234567899999984 47899999999999874
No 288
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.95 E-value=1e-27 Score=259.23 Aligned_cols=187 Identities=24% Similarity=0.374 Sum_probs=158.0
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|+..+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++++ ......+
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 76 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF-----RRKKRLY 76 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhc-----ccCCeEE
Confidence 68889999999999999999998899999998864322 2346788999999999999999999985 4455889
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||++++++.++.... ..+++.+++.++.|++.|++|||+. +|+|||+||+||++++++.+||+|||++
T Consensus 77 lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~ 147 (286)
T cd07846 77 LVFEFVDHTVLDDLEKYP------NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFA 147 (286)
T ss_pred EEEecCCccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeee
Confidence 999999999998877543 3578999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+....... ......|+..|+|||++. +.++|+|||||+++||+
T Consensus 148 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~ 195 (286)
T cd07846 148 RTLAAPGE--------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEML 195 (286)
T ss_pred eeccCCcc--------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHH
Confidence 86533211 112346889999999874 36799999999999874
No 289
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.95 E-value=2.4e-27 Score=257.31 Aligned_cols=190 Identities=23% Similarity=0.365 Sum_probs=159.3
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|+..+.||+|+||.||+|++..+++.||+|.++... ......+.+|++++++++||||+++++++.... ....
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~---~~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSN---LDKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC---CCcE
Confidence 57889999999999999999999899999999997443 223346778999999999999999999865432 2578
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||++ ++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 82 ~lv~e~~~-~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~ 152 (293)
T cd07843 82 YMVMEYVE-HDLKSLMETMK-----QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGL 152 (293)
T ss_pred EEEehhcC-cCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCc
Confidence 99999997 59999887643 3689999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
++....... ......+++.|+|||.+. +.++|+||+||++++|+
T Consensus 153 ~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~ 201 (293)
T cd07843 153 AREYGSPLK--------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELL 201 (293)
T ss_pred eeeccCCcc--------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHH
Confidence 986643211 111245789999999984 46799999999999874
No 290
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.94 E-value=3.4e-27 Score=251.43 Aligned_cols=188 Identities=25% Similarity=0.475 Sum_probs=154.9
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
++|.+.+.||+|+||.||+|++..+ ..||+|.+.... ...+.+.+|++++++++|||++++++++. ....++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~~ 77 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS------EEPIYI 77 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc------CCCcEE
Confidence 4688889999999999999998755 458999876433 34567889999999999999999998752 134689
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++++|.++++.... ..+++..++.++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 78 v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~ 150 (260)
T cd05069 78 VTEFMGKGSLLDFLKEGDG----KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLAR 150 (260)
T ss_pred EEEcCCCCCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccce
Confidence 9999999999999976431 4578899999999999999999998 99999999999999999999999999998
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
........ ......++..|+|||+.. +.++|+||+||++|||+
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~ 197 (260)
T cd05069 151 LIEDNEYT-------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELV 197 (260)
T ss_pred EccCCccc-------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHH
Confidence 65432211 111234678899999874 57899999999999874
No 291
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.94 E-value=2.6e-27 Score=254.93 Aligned_cols=179 Identities=25% Similarity=0.303 Sum_probs=145.5
Q ss_pred cccCCccEEEEEEEECCCcEEEEEEEeeccCC---cchHHHHHHHHHHHh---cCCCCcceEEeEeecCCCCCCceEeEE
Q 042766 712 MIGQGRFGTVYKGILGDDEMVVAVKVINLKQK---GASKSFVSECEALRN---IRHRNLIKIITICSSTDFEGVDFKALV 785 (914)
Q Consensus 712 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~---l~h~niv~l~~~~~~~~~~~~~~~~lv 785 (914)
.||+|+||.||+|++..+++.||+|.+..... .....+.+|..+++. .+||+|+++++++.. .+..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT-----PDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec-----CCeEEEE
Confidence 48999999999999998999999999864321 222334455544443 479999999888543 3478999
Q ss_pred EecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 786 FEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 786 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
|||+++|+|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||++..
T Consensus 76 ~e~~~~~~L~~~i~~~------~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 76 LDLMNGGDLHYHLSQH------GVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred EecCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCccee
Confidence 9999999999998754 3589999999999999999999999 999999999999999999999999999875
Q ss_pred ccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 866 LSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
..... .....||+.|||||++. +.++|+||+||++|+|+
T Consensus 147 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~ 190 (279)
T cd05633 147 FSKKK----------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLL 190 (279)
T ss_pred ccccC----------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHH
Confidence 43211 11246999999999874 46789999999999874
No 292
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=2e-27 Score=256.77 Aligned_cols=188 Identities=21% Similarity=0.311 Sum_probs=159.8
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.++|++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++... ...
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~ 78 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNE-----NNI 78 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecC-----CEE
Confidence 357888999999999999999999899999999986543 33457889999999999999999999996543 478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++++|.+++... ..+++..+..++.|++.|+.|||+.. +++||||||+||+++.++.++|+|||+
T Consensus 79 ~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl 150 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKKG------GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGV 150 (284)
T ss_pred EEEEecCCCCCHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCc
Confidence 9999999999999998754 35789999999999999999999732 899999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++...... .....||..|+|||++. +.++|+|||||++++++
T Consensus 151 ~~~~~~~~----------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~ 196 (284)
T cd06620 151 SGELINSI----------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELA 196 (284)
T ss_pred ccchhhhc----------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHH
Confidence 87542211 11346899999999984 47899999999998863
No 293
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.94 E-value=2.6e-27 Score=254.42 Aligned_cols=187 Identities=28% Similarity=0.338 Sum_probs=161.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
++|+..+.||.|+||.||+|++..+++.||+|.+.... ......+.+|++++++++||||+++++++.. ....+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK-----GSKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE-----CCeEE
Confidence 36888899999999999999999999999999987543 3345678899999999999999999998543 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+|+||+++++|.+++... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||++
T Consensus 76 ~v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 76 IIMEYCGGGSCLDLLKPG-------KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred EEEEeeCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 999999999999998743 578899999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+...... .......|++.|+|||++. +.++|+|||||++++|+
T Consensus 146 ~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~ 192 (274)
T cd06609 146 GQLTSTM--------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELA 192 (274)
T ss_pred eeecccc--------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHH
Confidence 8764321 1122356899999999985 47899999999999875
No 294
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.94 E-value=2.8e-27 Score=251.35 Aligned_cols=187 Identities=25% Similarity=0.369 Sum_probs=161.2
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
++|+..+.||+|+||.||+|++..+++.||+|.+..... .+++.+|++++++++||||+++++++.. ....++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~l 75 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFK-----NTDLWI 75 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeec-----CCcEEE
Confidence 578999999999999999999998889999999864432 6789999999999999999999998643 357899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
++||+++++|.+++...+ ..+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.+||+|||++.
T Consensus 76 ~~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~ 147 (256)
T cd06612 76 VMEYCGAGSVSDIMKITN-----KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSG 147 (256)
T ss_pred EEecCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccch
Confidence 999999999999987543 4689999999999999999999999 99999999999999999999999999998
Q ss_pred cccccccccccCCCCccccccCcccccccchhhh----hhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM----LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~----~~~Di~s~g~~~~~~f 914 (914)
....... ......|+..|+|||++.+ .++|+|||||++++|+
T Consensus 148 ~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~ 193 (256)
T cd06612 148 QLTDTMA--------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMA 193 (256)
T ss_pred hcccCcc--------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHH
Confidence 6543211 1123458899999999853 6899999999998874
No 295
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.94 E-value=1.3e-27 Score=257.10 Aligned_cols=187 Identities=26% Similarity=0.363 Sum_probs=158.3
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+.|+..+.||+|+||.||+|.+..+++.||+|.++... ....+.+.+|++++++++||||+++++++. .....+
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 78 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYL-----KGTKLW 78 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccc-----cCCceE
Confidence 35677788999999999999998889999999986443 334467889999999999999999999853 345789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++.. ..+++..+..++.|++.|+.|||++ +++|+||||+||+++.++.+|++|||++
T Consensus 79 lv~e~~~~~~L~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~ 148 (277)
T cd06642 79 IIMEYLGGGSALDLLKP-------GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred EEEEccCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEcccccc
Confidence 99999999999998864 3578889999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+.+..... ......|+..|+|||++. +.++|+|||||+++||+
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 195 (277)
T cd06642 149 GQLTDTQI--------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELA 195 (277)
T ss_pred ccccCcch--------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHH
Confidence 86543211 112346899999999985 46899999999999874
No 296
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.94 E-value=3.6e-27 Score=251.25 Aligned_cols=189 Identities=23% Similarity=0.475 Sum_probs=156.7
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.++||+|+||.||+|... +++.||+|.+.... ...+++.+|++++++++||||+++++++. .+..+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~ 76 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT------QEPIY 76 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc------cCCcE
Confidence 357889999999999999999876 56789999986433 34568899999999999999999998742 23578
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++..... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++++|||++
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 149 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEG----IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLA 149 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcce
Confidence 99999999999999875432 4688899999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........ ......++..|+|||++. +.++|+|||||++||++
T Consensus 150 ~~~~~~~~~-------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~ 197 (260)
T cd05067 150 RLIEDNEYT-------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 197 (260)
T ss_pred eecCCCCcc-------cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHH
Confidence 765422111 111234678899999884 57899999999999864
No 297
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=7.5e-28 Score=258.56 Aligned_cols=196 Identities=22% Similarity=0.297 Sum_probs=161.1
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.+-|..++.||-|+||+|..++..+|...||+|.+++.+ +........|-.||+.-+.+-||++|.. |++.+
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS-----FQDkd 702 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS-----FQDKD 702 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE-----eccCC
Confidence 355788899999999999999999999999999997554 3334466789999999999999999866 67778
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
.+|+||||++||++...+-+.+ .+++..+..++.++..|+++.|.. |+|||||||+|||||.||++|++||
T Consensus 703 nLYFVMdYIPGGDmMSLLIrmg------IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDF 773 (1034)
T KOG0608|consen 703 NLYFVMDYIPGGDMMSLLIRMG------IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDF 773 (1034)
T ss_pred ceEEEEeccCCccHHHHHHHhc------cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeec
Confidence 9999999999999999987653 578888899999999999999998 9999999999999999999999999
Q ss_pred ccccccc---cccc---------ccccCCC----------------------CccccccCcccccccchhh----hhhcc
Q 042766 861 GLAKFLS---NHHL---------DIASKTP----------------------SSSIGIKGTVGYVAPGKFF----MLYTH 902 (914)
Q Consensus 861 Gla~~~~---~~~~---------~~~~~~~----------------------~~~~~~~GT~~y~APE~~~----~~~~D 902 (914)
|+++-+. +..+ +...... ......+||+.|+|||++. ..-+|
T Consensus 774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cd 853 (1034)
T KOG0608|consen 774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCD 853 (1034)
T ss_pred cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccch
Confidence 9986432 1000 0000000 0012457999999999993 58899
Q ss_pred cCccccccccc
Q 042766 903 IPSFSCTNVHH 913 (914)
Q Consensus 903 i~s~g~~~~~~ 913 (914)
.||.|+++|||
T Consensus 854 wws~gvil~em 864 (1034)
T KOG0608|consen 854 WWSVGVILYEM 864 (1034)
T ss_pred hhHhhHHHHHH
Confidence 99999999998
No 298
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.94 E-value=2.5e-27 Score=254.01 Aligned_cols=189 Identities=23% Similarity=0.407 Sum_probs=155.4
Q ss_pred hcccccCcccCCccEEEEEEEECCC---cEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDD---EMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.+|.+.+.||+|+||.||+|++... ...||||...... ....+.+.+|+.++++++||||+++++++.. .
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------~ 79 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE------N 79 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC------C
Confidence 4688889999999999999997543 4578999886544 3445688999999999999999999998643 2
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++|+|.+++.... ..+++..++.++.|++.|++|+|+. +++||||||+||+++.++.+|++||
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~ 151 (270)
T cd05056 80 PVWIVMELAPLGELRSYLQVNK-----YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDF 151 (270)
T ss_pred CcEEEEEcCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccC
Confidence 4679999999999999997643 3588999999999999999999998 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++........ ......++..|+|||++. +.++|+||+||+++|++
T Consensus 152 g~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 202 (270)
T cd05056 152 GLSRYLEDESYY-------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 202 (270)
T ss_pred ceeeecccccce-------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHH
Confidence 999865432211 011223567899999874 47899999999998863
No 299
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.94 E-value=4.5e-27 Score=252.39 Aligned_cols=199 Identities=26% Similarity=0.406 Sum_probs=155.9
Q ss_pred ccccCcccCCccEEEEEEEEC---CCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC-Cc
Q 042766 707 FSSSNMIGQGRFGTVYKGILG---DDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEG-VD 780 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~-~~ 780 (914)
|.+.+.||+|+||.||+|+++ .+++.||||++..+. ....+++.+|++++++++||||+++++++......+ ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567789999999999999864 357899999986432 234567889999999999999999999875432111 12
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++++||+++|+|.+++...........+++..+++++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 3578999999999998875432212224578889999999999999999998 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++......... ......+++.|+|||.+. +.++|+||+||++++|+
T Consensus 158 g~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~ 209 (273)
T cd05074 158 GLSKKIYSGDYYR------QGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIM 209 (273)
T ss_pred cccccccCCccee------cCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHh
Confidence 9998654322110 111234677899999984 57899999999999874
No 300
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.94 E-value=3.4e-27 Score=252.89 Aligned_cols=187 Identities=27% Similarity=0.412 Sum_probs=149.1
Q ss_pred CcccCCccEEEEEEEECCCcE--EEEEEEeecc-CCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGDDEM--VVAVKVINLK-QKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||.||+|++.+++. .+|+|.++.. .....+.+.+|+++++++ +||||+++++++... ...++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-----~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-----GYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC-----CCceEEE
Confidence 468999999999999987765 4688887632 233456788999999999 799999999986543 4679999
Q ss_pred ecccCCCHHHHHhccCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEE
Q 042766 787 EYMENGSLEDWLHQSNDQ----------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAH 856 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 856 (914)
||+++|+|.+++...+.. .....+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEE
Confidence 999999999999754311 1123578999999999999999999998 999999999999999999999
Q ss_pred EecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 857 VGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 857 i~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++|||+++...... .......+..|+|||++. +.++|+|||||+++||+
T Consensus 153 l~dfgl~~~~~~~~---------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~ 205 (270)
T cd05047 153 IADFGLSRGQEVYV---------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 205 (270)
T ss_pred ECCCCCccccchhh---------hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHH
Confidence 99999986322110 001123466799999984 47899999999999874
No 301
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.94 E-value=4.7e-27 Score=248.72 Aligned_cols=183 Identities=26% Similarity=0.426 Sum_probs=149.8
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecc
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYM 789 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 789 (914)
+.||+|+||.||+|... ++..||+|+++.... .....+.+|++++++++||||+++++++... ...++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQR-----QPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC-----CccEEEEECC
Confidence 46899999999999875 678899998864432 2335788999999999999999999986543 3679999999
Q ss_pred cCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccc
Q 042766 790 ENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869 (914)
Q Consensus 790 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~ 869 (914)
++++|.+++.... ..+++.+++.++.|++.|+.|+|+. +++||||||+||+++.++.+|++|||++......
T Consensus 75 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (250)
T cd05085 75 PGGDFLSFLRKKK-----DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDG 146 (250)
T ss_pred CCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccc
Confidence 9999999987543 3578899999999999999999998 9999999999999999999999999998754322
Q ss_pred ccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 870 HLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 870 ~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
... ......++..|+|||++. +.++|+|||||++++++
T Consensus 147 ~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~ 188 (250)
T cd05085 147 IYS-------SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETF 188 (250)
T ss_pred ccc-------cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHh
Confidence 110 011123567899999985 46899999999999864
No 302
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.94 E-value=2.2e-27 Score=252.61 Aligned_cols=186 Identities=28% Similarity=0.410 Sum_probs=160.5
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
+|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||++++++ ++.....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-----~~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYS-----FQDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHh-----hcCCCeE
Confidence 4788899999999999999999899999999997443 2345788999999999999999999987 4455689
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++++|.+++... ..+++.++..++.|+++|+.|||+. +++|+||||+||+++.++.++|+|||.
T Consensus 76 ~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQK------VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred EEEEeCCCCCCHHHHHHhc------CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 9999999999999999754 3688899999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+....... ......|+..|+|||++. +.++|+||+||++|+|+
T Consensus 147 ~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~ 193 (258)
T cd05578 147 ATKVTPDT---------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECL 193 (258)
T ss_pred ccccCCCc---------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHH
Confidence 87654321 112346889999999985 58899999999999874
No 303
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.94 E-value=3.8e-27 Score=254.43 Aligned_cols=191 Identities=21% Similarity=0.303 Sum_probs=154.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHH-HHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEA-LRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|++.+.||+|+||.||+|++..+++.||+|+++... ......+..|++. ++..+||||+++++++.. ....
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-----~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFR-----EGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEec-----CCcE
Confidence 36888999999999999999999999999999987543 2233456667665 566789999999998643 3468
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||++ |+|.+++..... ....+++..++.++.|++.|++|||+++ +++||||||+||+++.++.+||+|||+
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~ 150 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVYD--KGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGI 150 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999996 689888765321 1246899999999999999999999853 799999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh--------hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF--------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~--------~~~~Di~s~g~~~~~~f 914 (914)
++...... ......|+..|+|||++. +.++|+||+||++++|+
T Consensus 151 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~ 201 (283)
T cd06617 151 SGYLVDSV---------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELA 201 (283)
T ss_pred cccccccc---------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHH
Confidence 98653211 111246889999999873 47799999999999874
No 304
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.94 E-value=4e-27 Score=250.24 Aligned_cols=189 Identities=22% Similarity=0.317 Sum_probs=159.6
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|+..+.||+|+||.||+++...+++.||+|.+.... ....+++.+|++++++++||||+++++++ +..+..+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF-----EENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeee-----cCCCeEE
Confidence 4788899999999999999999899999999986432 23446789999999999999999999984 4455889
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++..... ..+++.++++++.|++.|++|||++ +++|+||+|+||+++.++.++|+|||++
T Consensus 76 lv~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQRG----VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred EEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 99999999999999875431 3578889999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
........ ......|++.|+|||+.. +.++|+|||||++++|+
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~ 195 (256)
T cd08218 149 RVLNSTVE--------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMC 195 (256)
T ss_pred eecCcchh--------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHH
Confidence 86543211 111245899999999985 36799999999999874
No 305
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.94 E-value=4.1e-27 Score=250.90 Aligned_cols=190 Identities=27% Similarity=0.497 Sum_probs=158.0
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|.+.+.||+|+||.||+|++. +++.||||.+.... ...+++.+|++++++++||||+++++++.. ....+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 77 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSE-----EEPIY 77 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeec-----CCceE
Confidence 468999999999999999999986 45779999986433 345678999999999999999999998543 34689
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++..... ..+++.++..++.|++.|++|||++ +++||||||+||+++.++.+|++|||.+
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~----~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~ 150 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEG----KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLA 150 (261)
T ss_pred EEEeccCCCCHHHHHhcccc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccc
Confidence 99999999999999976432 4688999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........ ......++..|+|||.+. +.++|+||+||++++++
T Consensus 151 ~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~ 198 (261)
T cd05034 151 RLIEDDEYT-------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIV 198 (261)
T ss_pred eeccchhhh-------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHH
Confidence 866432111 111223567899999884 57899999999998864
No 306
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.94 E-value=5.9e-27 Score=256.52 Aligned_cols=198 Identities=25% Similarity=0.395 Sum_probs=160.6
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCC---C
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFE---G 778 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---~ 778 (914)
.++|+..+.||+|+||.||+|++..+++.||||.+.... ......+.+|++++++++||||+++++++...... .
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 357999999999999999999999999999999986443 22334667899999999999999999987654321 2
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
....++||||++ +++.+++.... ..+++.+++.++.|++.|++|||++ +++||||||+||+++.++.+||+
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~ 161 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKN-----VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLA 161 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEEC
Confidence 245699999996 58888876542 3688999999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|||++.......... ........++..|+|||++. +.++|+||+||++|+|+
T Consensus 162 dfg~~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~ 218 (310)
T cd07865 162 DFGLARAFSLSKNSK----PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMW 218 (310)
T ss_pred cCCCcccccCCcccC----CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHH
Confidence 999998764432111 11122346889999999874 46799999999999874
No 307
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.94 E-value=8e-28 Score=278.74 Aligned_cols=195 Identities=22% Similarity=0.253 Sum_probs=148.3
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCc-EEEEEEEe--------------ec---cCCcchHHHHHHHHHHHhcCCCCc
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDE-MVVAVKVI--------------NL---KQKGASKSFVSECEALRNIRHRNL 764 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~--------------~~---~~~~~~~~~~~E~~~l~~l~h~ni 764 (914)
..++|++.+.||+|+||+||+|+.+... +.+++|.+ .. ........+.+|++++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4578999999999999999999875322 22222211 00 112234568899999999999999
Q ss_pred ceEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCC
Q 042766 765 IKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKP 844 (914)
Q Consensus 765 v~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp 844 (914)
+++++++.. .+..++|||++ ++++.+++....... .......++..|+.|++.||+|||++ +||||||||
T Consensus 226 v~l~~~~~~-----~~~~~lv~e~~-~~~l~~~l~~~~~~~-~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP 295 (501)
T PHA03210 226 LKIEEILRS-----EANTYMITQKY-DFDLYSFMYDEAFDW-KDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKL 295 (501)
T ss_pred CcEeEEEEE-----CCeeEEEEecc-ccCHHHHHhhccccc-cccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCH
Confidence 999999654 34789999999 468888775432111 12234566788999999999999999 999999999
Q ss_pred CCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 845 SNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 845 ~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+|||++.++.+||+|||+|+.+..... .......||+.|+|||++. +.++|||||||++|||+
T Consensus 296 ~NILl~~~~~vkL~DFGla~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 362 (501)
T PHA03210 296 ENIFLNCDGKIVLGDFGTAMPFEKERE-------AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDML 362 (501)
T ss_pred HHEEECCCCCEEEEeCCCceecCcccc-------cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999987643211 1122457999999999984 57899999999999974
No 308
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.94 E-value=4.5e-27 Score=257.26 Aligned_cols=191 Identities=27% Similarity=0.386 Sum_probs=158.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|++.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|++++++++|+||+++++++.... .+.
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~~~ 82 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKH---LDS 82 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCC---CCe
Confidence 4689999999999999999999999999999999975432 22345678999999999999999999865322 245
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||++ ++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||
T Consensus 83 ~~lv~e~~~-~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 83 IFLVMEYCE-QDLASLLDNMP-----TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred EEEEEecCC-CCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccc
Confidence 799999996 58988887543 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+++....... ......+++.|+|||++. +.++|+||+||+++||+
T Consensus 154 ~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~ 203 (309)
T cd07845 154 LARTYGLPAK--------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELL 203 (309)
T ss_pred eeeecCCccC--------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHH
Confidence 9986643210 111234688999999984 47899999999999874
No 309
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.94 E-value=4.2e-27 Score=250.10 Aligned_cols=185 Identities=32% Similarity=0.475 Sum_probs=156.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
..+|++.+.||+|+||.||+|+.. ++.||+|.++.... ..+++.+|+.++++++|+||+++++++.. ....+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 76 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQ-----GNPLY 76 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcC-----CCCeE
Confidence 357888999999999999999875 67899999965433 46788999999999999999999998643 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.++++.... ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~ 149 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGR----AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLA 149 (256)
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccc
Confidence 99999999999999976432 3689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+....... ...++..|+|||++. +.++|+||+||++++|+
T Consensus 150 ~~~~~~~~-----------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~ 193 (256)
T cd05039 150 KEASQGQD-----------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 193 (256)
T ss_pred cccccccc-----------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHH
Confidence 86532110 123566799999884 46899999999998863
No 310
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.94 E-value=5.8e-27 Score=252.10 Aligned_cols=187 Identities=26% Similarity=0.362 Sum_probs=159.2
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
..|+..+.||+|+||.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-----GTKLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----CCEEE
Confidence 45778889999999999999999889999999987543 3345678899999999999999999998644 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++.. ..+++.++..++.|++.|++|+|+. +++|+||+|+||+++.++.++++|||++
T Consensus 79 lv~e~~~~~~L~~~i~~-------~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~ 148 (277)
T cd06640 79 IIMEYLGGGSALDLLRA-------GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred EEEecCCCCcHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccc
Confidence 99999999999999864 2478888999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
........ ......|+..|+|||++. +.++|+|||||+++||+
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~ 195 (277)
T cd06640 149 GQLTDTQI--------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELA 195 (277)
T ss_pred eeccCCcc--------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHH
Confidence 76543211 112346889999999974 47899999999999874
No 311
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.94 E-value=5.7e-27 Score=250.44 Aligned_cols=192 Identities=24% Similarity=0.391 Sum_probs=157.2
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC------cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK------GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
+|+..+.||+|+||.||+|+.. +++.+|+|.++.... ...+.+.+|++++++++|+||+++++++.. .
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD-----D 74 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec-----C
Confidence 4778899999999999999875 778999999864321 123568899999999999999999999643 3
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
+..++||||+++++|.+++.+. ..+++..+..++.|++.|++|+|+. +|+|+||||+||+++.++.+||+|
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 145 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRF------GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLID 145 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEecc
Confidence 5789999999999999999754 3578889999999999999999998 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++......... ..........||..|+|||++. +.++|+||+||++++|+
T Consensus 146 fg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~ 202 (265)
T cd06631 146 FGCARRLAWVGLHG--THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMA 202 (265)
T ss_pred chhhHhhhhccccc--cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHH
Confidence 99998653211110 0111122356999999999985 47899999999999874
No 312
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.94 E-value=4e-27 Score=255.35 Aligned_cols=188 Identities=26% Similarity=0.362 Sum_probs=160.9
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|+...++..||+|.+........+.+.+|+.++++++||||+++++++.. ....+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~~~~ 92 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV-----GDELW 92 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeee-----CCcEE
Confidence 3689999999999999999999988889999999875555556788999999999999999999998543 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+|+||+++++|.+++.+. .+++.++..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 93 lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~ 162 (293)
T cd06647 93 VVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 162 (293)
T ss_pred EEEecCCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcce
Confidence 999999999999998653 467888999999999999999999 9999999999999999999999999998
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
........ ......|++.|+|||.+. +.++|+|||||++++++
T Consensus 163 ~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll 209 (293)
T cd06647 163 AQITPEQS--------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV 209 (293)
T ss_pred eccccccc--------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHH
Confidence 75543211 112346899999999984 47899999999998874
No 313
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.94 E-value=5.3e-27 Score=249.47 Aligned_cols=186 Identities=27% Similarity=0.413 Sum_probs=157.9
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-----CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-----KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
+|+..+.||+|+||+||+|....+++.||+|.+.... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE-----ED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEec-----CC
Confidence 4677889999999999999998889999999986543 2244678899999999999999999998543 34
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.+||+||
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKY------GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccC
Confidence 789999999999999999754 3578889999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|++....... ......|++.|+|||.+. +.++|+||+||++++|+
T Consensus 147 ~~~~~~~~~~---------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~ 196 (258)
T cd06632 147 GMAKQVVEFS---------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMA 196 (258)
T ss_pred ccceeccccc---------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHH
Confidence 9987653321 112356899999999984 45799999999998874
No 314
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.94 E-value=7.6e-27 Score=253.75 Aligned_cols=197 Identities=23% Similarity=0.343 Sum_probs=159.2
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|+..+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|++++++++ ||||+++++++...+......
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888999999999999999999999999999986443 223467889999999995 699999999876554333345
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC-CCcEEEecc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY-DMVAHVGDF 860 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DF 860 (914)
.++||||+++ ++.+++...... ....+++..++.++.||+.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRG-PGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeec
Confidence 7999999985 899988654321 124689999999999999999999999 9999999999999998 889999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+++.+.... .......+++.|+|||++. +.++|+||+||++|+|+
T Consensus 156 g~~~~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~ 206 (295)
T cd07837 156 GLGRAFSIPV--------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMS 206 (295)
T ss_pred ccceecCCCc--------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHH
Confidence 9997653211 0111235788999999874 46899999999999873
No 315
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.94 E-value=5.3e-27 Score=261.56 Aligned_cols=191 Identities=23% Similarity=0.278 Sum_probs=158.2
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCC-CCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTD-FEGV 779 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~ 779 (914)
...+|+..+.||+|+||.||+|++..+++.||+|++... .....+.+.+|++++++++||||+++++++.... ++..
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 346899999999999999999999999999999998632 2334457788999999999999999999865332 2333
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||++ +++.+.+.. .++..++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~--------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~D 161 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM--------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 161 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence 46799999995 588887753 377888899999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++...... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 162 fg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~ 211 (353)
T cd07850 162 FGLARTAGTSF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 211 (353)
T ss_pred CccceeCCCCC---------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHH
Confidence 99998653221 112346899999999985 47899999999999874
No 316
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.94 E-value=7e-27 Score=250.77 Aligned_cols=189 Identities=24% Similarity=0.445 Sum_probs=156.4
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC----------cchHHHHHHHHHHHhcCCCCcceEEeEeecCC
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK----------GASKSFVSECEALRNIRHRNLIKIITICSSTD 775 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 775 (914)
+|...+.||+|+||.||+|+...+++.||+|.++.... ...+.+.+|++++++++||||+++++++..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 79 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-- 79 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc--
Confidence 46778899999999999999988899999998863211 112467889999999999999999998543
Q ss_pred CCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcE
Q 042766 776 FEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVA 855 (914)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 855 (914)
....++||||+++++|.+++... ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+
T Consensus 80 ---~~~~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~ 147 (272)
T cd06629 80 ---EEYLSIFLEYVPGGSIGSCLRTY------GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGIC 147 (272)
T ss_pred ---CCceEEEEecCCCCcHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeE
Confidence 34789999999999999999764 3578888999999999999999998 99999999999999999999
Q ss_pred EEecccccccccccccccccCCCCccccccCcccccccchhh------hhhcccCcccccccccC
Q 042766 856 HVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 856 ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~~~~~~f 914 (914)
|++|||+++....... ........|+..|+|||++. +.++|+||+||++++++
T Consensus 148 ~l~d~~~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~ 206 (272)
T cd06629 148 KISDFGISKKSDDIYD------NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMF 206 (272)
T ss_pred EEeecccccccccccc------ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHH
Confidence 9999999975432110 11122356899999999874 35699999999998874
No 317
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.94 E-value=6.5e-27 Score=248.76 Aligned_cols=189 Identities=29% Similarity=0.525 Sum_probs=157.9
Q ss_pred ccccCcccCCccEEEEEEEECCCc----EEEEEEEeeccCCc-chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDE----MVVAVKVINLKQKG-ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
+++.+.||+|+||.||+|++...+ ..||+|+++..... ..+.+.+|++.++.++|+||+++++++... +.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE-----EP 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC-----Ce
Confidence 356789999999999999998766 89999999654433 567899999999999999999999986443 47
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.+++|||+++++|.+++..... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++++|||
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg 148 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRP----KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFG 148 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhh----ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccC
Confidence 8999999999999999976431 2289999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++........... ...+++.|+|||... +.++|+||+||++++|+
T Consensus 149 ~~~~~~~~~~~~~~-------~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~ 198 (258)
T smart00219 149 LSRDLYDDDYYKKK-------GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIF 198 (258)
T ss_pred Cceecccccccccc-------cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHH
Confidence 99876543211110 123788999999883 58999999999998874
No 318
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.94 E-value=6.3e-27 Score=248.64 Aligned_cols=188 Identities=26% Similarity=0.422 Sum_probs=158.5
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|+..+.||+|+||.||+|....+++.+|+|.+.... ....+.+.+|++++++++||||+++++++ ......+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENF-----LEDKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeE-----ecCCEEE
Confidence 4788899999999999999999899999999987542 23456888999999999999999999874 3345789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC-CcEEEecccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGL 862 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~-~~~ki~DFGl 862 (914)
+||||+++++|.+++..... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.+ +.+|++|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRCN----SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred EEEecCCCCCHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 99999999999999976432 4588999999999999999999999 99999999999999865 4689999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++...... ......|++.|+|||.+. +.++|+|||||++++|+
T Consensus 149 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~ 195 (256)
T cd08220 149 SKILSSKS---------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELA 195 (256)
T ss_pred ceecCCCc---------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHH
Confidence 98654321 112346899999999985 46899999999998874
No 319
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.94 E-value=8.4e-27 Score=248.37 Aligned_cols=189 Identities=22% Similarity=0.451 Sum_probs=155.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++. .+..||+|.+... ....+.+.+|++++++++|+||+++++++.. ...+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~ 76 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPIY 76 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC------CCeE
Confidence 357889999999999999999875 4557999988643 2345678899999999999999999988543 3578
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++..... ...++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 149 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLA 149 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCc----cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcce
Confidence 99999999999999976432 4578889999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........ ......++..|+|||++. +.++|+||+||++|+++
T Consensus 150 ~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~ 197 (260)
T cd05073 150 RVIEDNEYT-------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 197 (260)
T ss_pred eeccCCCcc-------cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHH
Confidence 865432211 111234667899999984 46899999999999864
No 320
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.94 E-value=7.2e-27 Score=251.37 Aligned_cols=179 Identities=25% Similarity=0.302 Sum_probs=145.6
Q ss_pred cccCCccEEEEEEEECCCcEEEEEEEeeccCC---cchHHHHHHHHH---HHhcCCCCcceEEeEeecCCCCCCceEeEE
Q 042766 712 MIGQGRFGTVYKGILGDDEMVVAVKVINLKQK---GASKSFVSECEA---LRNIRHRNLIKIITICSSTDFEGVDFKALV 785 (914)
Q Consensus 712 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~---l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 785 (914)
.||+|+||.||+|++..+++.||+|.+..... .....+..|..+ ++...||+|+++++++. ..+..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH-----TPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeee-----cCCEEEEE
Confidence 48999999999999988999999999864421 112233444443 44457999999988843 44578999
Q ss_pred EecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 786 FEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 786 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
|||++||+|.+++... ..+++.++..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 76 ~e~~~g~~L~~~l~~~------~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~ 146 (278)
T cd05606 76 LDLMNGGDLHYHLSQH------GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (278)
T ss_pred EecCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccc
Confidence 9999999999988654 3689999999999999999999998 999999999999999999999999999875
Q ss_pred ccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 866 LSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+.... .....||..|+|||++. +.++|+||+||++|||+
T Consensus 147 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~ 190 (278)
T cd05606 147 FSKKK----------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 190 (278)
T ss_pred cCccC----------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHH
Confidence 43211 11346999999999984 46799999999999874
No 321
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.94 E-value=5.9e-27 Score=252.09 Aligned_cols=186 Identities=25% Similarity=0.337 Sum_probs=158.4
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcC---CCCcceEEeEeecCCCCCCce
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIR---HRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~~~~ 781 (914)
.|+..+.||+|+||.||+|++..+++.||+|.++... ....+++.+|++++++++ |||++++++++.. ...
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-----~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-----GPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-----CCE
Confidence 4777889999999999999998899999999986542 334567889999999996 9999999998543 347
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++++|.+++... .+++..++.++.|++.|+.|||+. +|+||||+|+||+++.++.++++|||
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKAG-------PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFG 146 (277)
T ss_pred EEEEEecCCCCcHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCC
Confidence 89999999999999988642 578899999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
++........ ......|+..|+|||++. +.++|+||+||++++|+
T Consensus 147 ~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll 196 (277)
T cd06917 147 VAALLNQNSS--------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMA 196 (277)
T ss_pred ceeecCCCcc--------ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHH
Confidence 9987643221 112346899999999874 46899999999999874
No 322
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.94 E-value=8.6e-27 Score=248.83 Aligned_cols=191 Identities=29% Similarity=0.458 Sum_probs=160.6
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc--chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG--ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|+..+.||+|+||.||+|++..+++.||+|.++..... ..+.+.+|++++++++|+||+++++++. ..+..+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV-----HREKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe-----cCCEEE
Confidence 478889999999999999999888999999999755443 5678999999999999999999999853 334789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+|+||+++++|.+++... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 76 lv~e~~~~~~L~~~~~~~------~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 76 IFMEYCSGGTLEELLEHG------RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred EEEecCCCCcHHHHHhhc------CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 999999999999998754 3478888999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhhh-------hhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM-------LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~-------~~~Di~s~g~~~~~~f 914 (914)
........... .......|++.|+|||++.+ .++|+|||||++++++
T Consensus 147 ~~~~~~~~~~~----~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~ 200 (264)
T cd06626 147 VKLKNNTTTMG----EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMA 200 (264)
T ss_pred cccCCCCCccc----ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHH
Confidence 87644321110 00123568899999999853 5699999999999874
No 323
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.94 E-value=4.5e-27 Score=260.08 Aligned_cols=195 Identities=26% Similarity=0.355 Sum_probs=160.8
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.... ......
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCceE
Confidence 68999999999999999999999999999999986432 234467788999999999999999998765433 234578
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||++ ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 84 ~lv~e~~~-~~l~~~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~ 153 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD------QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGM 153 (334)
T ss_pred EEEEehhh-hhHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEeccccc
Confidence 99999995 6899988654 3588999999999999999999998 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
++........ .........|+..|+|||++. +.++|+||+||++++|+
T Consensus 154 ~~~~~~~~~~----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~ 206 (334)
T cd07855 154 ARGLSSSPTE----HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEML 206 (334)
T ss_pred ceeecccCcC----CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHH
Confidence 9765432211 111122357899999999873 47899999999999874
No 324
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=1.8e-27 Score=258.66 Aligned_cols=190 Identities=25% Similarity=0.394 Sum_probs=158.2
Q ss_pred ccccCcccCCccEEEEEEEECC---CcEEEEEEEeeccCCc-chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 707 FSSSNMIGQGRFGTVYKGILGD---DEMVVAVKVINLKQKG-ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
....+.||+|.||+|++|.|.. +...||||.++..... ...+|.+|+.+|.+++|||++++||++... ..
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q------p~ 185 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ------PA 185 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc------hh
Confidence 3445789999999999999964 3467999999765544 668999999999999999999999996542 46
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
.+|||.++.|+|.+.+++.. ...+.......++.|||.|++||.++ +.||||+..+|+++.....|||+|||+
T Consensus 186 mMV~ELaplGSLldrLrka~----~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGL 258 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAK----KAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGL 258 (1039)
T ss_pred hHHhhhcccchHHHHHhhcc----ccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccc
Confidence 89999999999999998732 25677888899999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~f 914 (914)
.+.+...+..... .+ ...-...|.|||.+ |+.++|+|+||+|+.|||
T Consensus 259 mRaLg~ned~Yvm-~p----~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMF 309 (1039)
T KOG0199|consen 259 MRALGENEDMYVM-AP----QRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMF 309 (1039)
T ss_pred eeccCCCCcceEe-cC----CCcCcccccCHhHhccccccccchhhhhhhhHHhhh
Confidence 9988764321111 11 11234579999999 579999999999999998
No 325
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.94 E-value=6.2e-27 Score=257.12 Aligned_cols=196 Identities=23% Similarity=0.362 Sum_probs=158.6
Q ss_pred cccccCcccCCccEEEEEEEECC--CcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGD--DEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.|++.+.||+|+||.||+|++.. +++.||+|.+.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCc
Confidence 37788899999999999999987 78999999997532 44456788999999999999999999997543 125
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC----CCcEE
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY----DMVAH 856 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~----~~~~k 856 (914)
..++||||+++ ++.+++...... ....+++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+|
T Consensus 78 ~~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~k 152 (316)
T cd07842 78 SVYLLFDYAEH-DLWQIIKFHRQA-KRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVK 152 (316)
T ss_pred eEEEEEeCCCc-CHHHHHHhhccC-CCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEE
Confidence 78999999964 777776543221 113688899999999999999999999 9999999999999999 89999
Q ss_pred EecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 857 VGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 857 i~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+|||+++........ ........||+.|+|||++. +.++|+||+||++++|+
T Consensus 153 l~Dfg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~ 210 (316)
T cd07842 153 IGDLGLARLFNAPLKP-----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELL 210 (316)
T ss_pred ECCCccccccCCCccc-----ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 9999999876432211 11223457899999999874 36799999999999873
No 326
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=1.1e-27 Score=264.69 Aligned_cols=188 Identities=28% Similarity=0.447 Sum_probs=156.7
Q ss_pred cccccCcccCCccEEEEEEEECCCc----EEEEEEEeecc-CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDE----MVVAVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
+....++||+|+||+||+|.+-..+ .+||||++... ..+...++.+|+-+|.+++|||+++++|+|....
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~----- 771 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST----- 771 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-----
Confidence 4455689999999999999985444 46899988633 3456789999999999999999999999987654
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..||++||++|+|.++++.++ ..+-....+.|..|||+||.|||.+ ++|||||..+|||+.+...+||.||
T Consensus 772 -~qlvtq~mP~G~LlDyvr~hr-----~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdf 842 (1177)
T KOG1025|consen 772 -LQLVTQLMPLGCLLDYVREHR-----DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDF 842 (1177)
T ss_pred -HHHHHHhcccchHHHHHHHhh-----ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEec
Confidence 678999999999999999876 4677778899999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchh----hhhhcccCccccccccc
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~ 913 (914)
|+|+........... ....-.+.|||=|.+ ++.++||||||+|+-|.
T Consensus 843 gla~ll~~d~~ey~~------~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWEl 893 (1177)
T KOG1025|consen 843 GLAKLLAPDEKEYSA------PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWEL 893 (1177)
T ss_pred chhhccCcccccccc------cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHH
Confidence 999987654322111 112345679999988 47999999999998774
No 327
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.94 E-value=7.1e-27 Score=253.47 Aligned_cols=197 Identities=21% Similarity=0.300 Sum_probs=145.9
Q ss_pred hcccccCcccCCccEEEEEEEECCC---cEEEEEEEeeccCCcch-----------HHHHHHHHHHHhcCCCCcceEEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDD---EMVVAVKVINLKQKGAS-----------KSFVSECEALRNIRHRNLIKIITI 770 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~l~~~ 770 (914)
.+|++.+.||+|+||.||+|++..+ +..+|+|+......... .....+...+..++|++|++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5899999999999999999999877 66778886543332111 112233445566789999999987
Q ss_pred eecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec
Q 042766 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 850 (914)
Q Consensus 771 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~ 850 (914)
+.... ....+.+++||++. .++.+.+... ...++..+..++.|++.|++|||+. +|+||||||+|||++
T Consensus 92 ~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~ 160 (294)
T PHA02882 92 GSFKR-CRMYYRFILLEKLV-ENTKEIFKRI------KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVD 160 (294)
T ss_pred eeEec-CCceEEEEEEehhc-cCHHHHHHhh------ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc
Confidence 54332 22235678888874 4777766543 2356778899999999999999998 999999999999999
Q ss_pred CCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 851 YDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 851 ~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
.++.+||+|||+|+.+......... .........||+.|||||+.. +.++|||||||+++||
T Consensus 161 ~~~~~~l~DFGla~~~~~~~~~~~~-~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el 226 (294)
T PHA02882 161 GNNRGYIIDYGIASHFIIHGKHIEY-SKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKW 226 (294)
T ss_pred CCCcEEEEEcCCceeeccCCccccc-ccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999876432211110 111122356999999999984 5899999999999987
No 328
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.94 E-value=7.2e-27 Score=247.47 Aligned_cols=184 Identities=27% Similarity=0.444 Sum_probs=151.8
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccCCc-chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecc
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG-ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYM 789 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 789 (914)
++||+|+||.||+|.+.. ++.||+|.+...... ..+.+.+|++++++++||||+++++++.. ....++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQ-----KQPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-----CCCeEEEEEcC
Confidence 469999999999999987 899999998754433 45688999999999999999999998643 34789999999
Q ss_pred cCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccc
Q 042766 790 ENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869 (914)
Q Consensus 790 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~ 869 (914)
++++|.+++.... ..+++..++.++.|++.|++|||++ +++||||||+||+++.++.+||+|||+++.....
T Consensus 75 ~~~~l~~~l~~~~-----~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (251)
T cd05041 75 PGGSLLTFLRKKK-----NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGG 146 (251)
T ss_pred CCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCC
Confidence 9999999997543 3578889999999999999999999 9999999999999999999999999999865321
Q ss_pred ccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 870 HLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 870 ~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.... ......++..|+|||++. +.++|+||+||++|||+
T Consensus 147 ~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~ 189 (251)
T cd05041 147 IYTV------SDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETF 189 (251)
T ss_pred ccee------ccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHH
Confidence 1110 001123467799999874 47899999999999874
No 329
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=6.1e-29 Score=241.93 Aligned_cols=188 Identities=22% Similarity=0.295 Sum_probs=152.3
Q ss_pred ccCcccCCccEEEEEEEECCCcEEEEEEEeec--cCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 709 SSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 709 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
..+.||-|+||+||.+++..+|+.||.|++.. ..-...+++.+|++++..++|.|++..+++-.-...+--.+.|++.
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 34789999999999999999999999998852 2334567899999999999999999888764332222223467889
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
|.|. .+|..++-.. ..++...+.-+.+||++|++|||+. +|.||||||.|.|+..+...||+|||+|+..
T Consensus 137 ELmQ-SDLHKIIVSP------Q~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 137 ELMQ-SDLHKIIVSP------QALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred HHHH-hhhhheeccC------CCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEeccccccccc
Confidence 9885 4888877543 5678888888999999999999999 9999999999999999999999999999965
Q ss_pred cccccccccCCCCccccccCcccccccchhh-----hhhcccCccccccccc
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~ 913 (914)
...+ ....+..+-|-+|.|||.++ +.++||||.||++.|+
T Consensus 207 e~d~-------~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaEL 251 (449)
T KOG0664|consen 207 DQRD-------RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAEL 251 (449)
T ss_pred chhh-------hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHH
Confidence 4322 11223456788999999995 4889999999998775
No 330
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.94 E-value=9.5e-27 Score=247.34 Aligned_cols=188 Identities=29% Similarity=0.508 Sum_probs=155.4
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
.+|++.+.||+|+||.||+|.+. .+..+|+|.++.. ......+.+|++++++++||+|+++++++.. ....++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~~ 76 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTE-----RSPICL 76 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEcc-----CCceEE
Confidence 57888999999999999999886 4668999988633 2334678999999999999999999998543 346899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++
T Consensus 77 v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 148 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQR-----GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCccee
Confidence 999999999999987543 3578889999999999999999999 99999999999999999999999999997
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
....... .......++.+|+|||++. +.++|+||+||+++||+
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~ 195 (256)
T cd05112 149 FVLDDQY-------TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred ecccCcc-------cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHH
Confidence 6533211 1111234567899999885 47899999999999874
No 331
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.94 E-value=4.7e-27 Score=253.88 Aligned_cols=188 Identities=26% Similarity=0.405 Sum_probs=156.5
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|+..+.||+|++|.||+|++..+++.||||+++... ......+.+|++++++++||||+++++++. ..+..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcc-----cCCcEE
Confidence 4788899999999999999999899999999986443 223357889999999999999999999853 445789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||++ ++|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~ 147 (284)
T cd07860 76 LVFEFLH-QDLKKFMDASPL----SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 147 (284)
T ss_pred EEeeccc-cCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccch
Confidence 9999995 689998865432 4688999999999999999999998 9999999999999999999999999998
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+....... ......+++.|+|||++. +.++|+|||||++|+|+
T Consensus 148 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~ 195 (284)
T cd07860 148 RAFGVPVR--------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 195 (284)
T ss_pred hhcccCcc--------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHH
Confidence 76532110 111235788999999874 46799999999999873
No 332
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.94 E-value=7.5e-27 Score=249.30 Aligned_cols=193 Identities=26% Similarity=0.381 Sum_probs=160.1
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|++.+.||+|+||.||+|.+..+++.||+|++.... ....+++.+|++++++++||||+++++++... .....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDR---SNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecC---CCCEEE
Confidence 4778899999999999999999899999999986432 23345788999999999999999999876432 234679
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHH-----hCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH-----HHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH-----~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
++|||+++++|.+++..... ....+++.+++.++.|++.|++|+| +. +++||||||+||+++.++.+|++
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~ 152 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKK--ERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLG 152 (265)
T ss_pred EEehhccCCCHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEe
Confidence 99999999999999975421 2256889999999999999999999 66 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||+++....... ......|++.|+|||++. +.++|+||+||++++|+
T Consensus 153 d~g~~~~~~~~~~--------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~ 204 (265)
T cd08217 153 DFGLAKILGHDSS--------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELC 204 (265)
T ss_pred cccccccccCCcc--------cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHH
Confidence 9999986543221 012346899999999985 46799999999998874
No 333
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.94 E-value=4.6e-27 Score=251.76 Aligned_cols=190 Identities=27% Similarity=0.427 Sum_probs=151.8
Q ss_pred CcccCCccEEEEEEEECCCc------EEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 711 NMIGQGRFGTVYKGILGDDE------MVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+.||+|+||.||+|++.+.. +.||+|.+.... ......+.+|++++++++||||+++++++.. ....+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL-----NEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecC-----CCCeE
Confidence 36899999999999986433 789999885432 2345678899999999999999999998643 34689
Q ss_pred EEEecccCCCHHHHHhccCCcc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC-----cEEE
Q 042766 784 LVFEYMENGSLEDWLHQSNDQV-EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM-----VAHV 857 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~-----~~ki 857 (914)
+||||+++++|.+++....... ....+++.+++.++.|++.|++|||+. +++|+||||+||+++.++ .+|+
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEE
Confidence 9999999999999997542211 123578899999999999999999998 999999999999999877 8999
Q ss_pred ecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+|||+++.......... .....++..|+|||++. +.++|+|||||++++|+
T Consensus 153 ~dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ell 207 (269)
T cd05044 153 GDFGLARDIYKSDYYRK------EGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEIL 207 (269)
T ss_pred CCccccccccccccccc------CcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHH
Confidence 99999986543221111 11234678899999884 58899999999999873
No 334
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=1e-26 Score=251.48 Aligned_cols=191 Identities=24% Similarity=0.320 Sum_probs=159.5
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
+|...+.||+|++|.||+|++..+++.||+|.+..... ....++.+|++++++++||||+++++++... .....++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~~~l 78 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDE---SSSSIGI 78 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc---CCCeEEE
Confidence 67888999999999999999998999999999874432 3456789999999999999999999987543 2346899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++++|.+++..... ....+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++.
T Consensus 79 v~e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~ 153 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKK--RGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSG 153 (287)
T ss_pred EEEecCCCCHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccc
Confidence 9999999999998764221 124578889999999999999999999 99999999999999999999999999987
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
....... ....++..|+|||.+. +.++|+||+||++|+|+
T Consensus 154 ~~~~~~~----------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~ 197 (287)
T cd06621 154 ELVNSLA----------GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVA 197 (287)
T ss_pred ccccccc----------ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHH
Confidence 5432110 1245788999999885 46899999999999875
No 335
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.94 E-value=9.3e-27 Score=251.55 Aligned_cols=189 Identities=24% Similarity=0.410 Sum_probs=157.7
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
+|+..+.||+|++|.||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++++... +..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTE-----NKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeC-----CcEEE
Confidence 47888999999999999999998999999999975432 3346778899999999999999999986543 47899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++ ++.+++..... ...+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++|||+++
T Consensus 76 v~e~~~~-~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 76 VFEYMDK-DLKKYMDTHGV---RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred EEecCCc-cHHHHHHhcCC---CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 9999975 89998875432 24689999999999999999999998 99999999999999999999999999997
Q ss_pred cccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
....... ......+|+.|+|||++. +.++|+||+||++++|+
T Consensus 149 ~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~ 195 (284)
T cd07836 149 AFGIPVN--------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMI 195 (284)
T ss_pred hhcCCcc--------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHH
Confidence 6532110 111245789999999873 46899999999998874
No 336
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.94 E-value=1.1e-26 Score=248.02 Aligned_cols=187 Identities=27% Similarity=0.396 Sum_probs=161.4
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
+|++.+.||+|++|.||+|++..+++.||+|++..... ...+.+.+|++.+++++||||+++++++.. ....++
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~l 76 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYK-----EGEISI 76 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcc-----CCeEEE
Confidence 68888999999999999999999999999999875543 445789999999999999999999998543 357899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH-HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~-~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
||||+++++|.+++... ..+++..+..++.|+++|++|+|+ . +++||||+|+||+++.++.++++|||.+
T Consensus 77 v~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~ 147 (264)
T cd06623 77 VLEYMDGGSLADLLKKV------GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGIS 147 (264)
T ss_pred EEEecCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccc
Confidence 99999999999999764 468899999999999999999999 8 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+....... ......|+..|+|||.+. +.++|+|||||++++|+
T Consensus 148 ~~~~~~~~--------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~ 194 (264)
T cd06623 148 KVLENTLD--------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECA 194 (264)
T ss_pred eecccCCC--------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHH
Confidence 86543221 111346889999999985 46899999999999874
No 337
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.94 E-value=1.3e-26 Score=250.40 Aligned_cols=186 Identities=23% Similarity=0.329 Sum_probs=158.2
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALV 785 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 785 (914)
+|...+.||+|++|.||+|.+..+++.||+|+++.......+.+.+|+.++++++||||+++++++.. .+..++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~-----~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLV-----GDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEc-----CCeEEEE
Confidence 45556799999999999999988899999999876555556678899999999999999999998543 3478999
Q ss_pred EecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 786 FEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 786 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
+||+++++|.+++.. ..+++.++..++.|++.|++|+|+. +|+||||||+||+++.++.++++|||.+..
T Consensus 95 ~e~~~~~~L~~~~~~-------~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~ 164 (285)
T cd06648 95 MEFLEGGALTDIVTH-------TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQ 164 (285)
T ss_pred EeccCCCCHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchh
Confidence 999999999999875 2478889999999999999999999 999999999999999999999999998875
Q ss_pred ccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 866 LSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
..... .......|++.|+|||+.. +.++|+||+||++++|+
T Consensus 165 ~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell 209 (285)
T cd06648 165 VSKEV--------PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMV 209 (285)
T ss_pred hccCC--------cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHH
Confidence 43211 0112346899999999984 47899999999999874
No 338
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.94 E-value=5e-27 Score=250.83 Aligned_cols=186 Identities=25% Similarity=0.370 Sum_probs=159.6
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
+|+..+.||+|+||.||+|+++.+++.||+|++.... ....+++.+|++++++++||||+++++++... ...++
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~l 76 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNN-----GDISI 76 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecC-----CEEEE
Confidence 6778899999999999999999899999999987543 33456788999999999999999999986443 57899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH-HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~-~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
||||+++++|.+++.... ..+++.....++.|++.|++|+|+ . +++||||||+||+++.++.+||+|||.+
T Consensus 77 v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~ 148 (265)
T cd06605 77 CMEYMDGGSLDKILKEVQ-----GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVS 148 (265)
T ss_pred EEEecCCCcHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccc
Confidence 999999999999997643 468888999999999999999999 7 9999999999999999999999999998
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
........ ....|+..|+|||.+. +.++|+||+||++++|+
T Consensus 149 ~~~~~~~~----------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~ 193 (265)
T cd06605 149 GQLVNSLA----------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELA 193 (265)
T ss_pred hhhHHHHh----------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHH
Confidence 76532211 0156889999999985 47899999999999875
No 339
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.94 E-value=7.2e-27 Score=258.71 Aligned_cols=193 Identities=25% Similarity=0.345 Sum_probs=160.2
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
..+|.+.+.||+|+||.||+|++..+++.||||.++.. .......+.+|+.++++++||||+++++++.....+....
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 35789999999999999999999999999999998643 2333457788999999999999999999865443333346
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+. ++|.+++... ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg 153 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS------QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFG 153 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCc
Confidence 899999995 7899988754 3688999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+++...... .......||..|+|||++. +.++|+||+||++++|+
T Consensus 154 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~ 203 (337)
T cd07858 154 LARTTSEKG--------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELL 203 (337)
T ss_pred cccccCCCc--------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHH
Confidence 998653321 1112346889999999874 37899999999998873
No 340
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.94 E-value=1.2e-26 Score=249.61 Aligned_cols=181 Identities=25% Similarity=0.348 Sum_probs=152.3
Q ss_pred ccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecc
Q 042766 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYM 789 (914)
Q Consensus 713 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 789 (914)
||+|+||+||+|++..+++.||+|.+.... ....+.+.+|++++++++||||+++++++. ..+..++||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFE-----TKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEe-----cCCeEEEEEecC
Confidence 699999999999999899999999986432 223456778999999999999999998853 345789999999
Q ss_pred cCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccc
Q 042766 790 ENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869 (914)
Q Consensus 790 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~ 869 (914)
++++|.+++..... ..+++.++..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||.++.....
T Consensus 76 ~~~~L~~~l~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 76 NGGDLKYHIYNVGE----PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG 148 (277)
T ss_pred CCCcHHHHHHHcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence 99999999876532 3689999999999999999999999 9999999999999999999999999998765321
Q ss_pred ccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 870 HLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 870 ~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
. ......|+..|+|||++. +.++|+||+||++++|.
T Consensus 149 ~---------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~ 188 (277)
T cd05577 149 K---------KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMI 188 (277)
T ss_pred C---------ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHh
Confidence 1 111245888999999984 46799999999998873
No 341
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.94 E-value=1.7e-26 Score=246.88 Aligned_cols=187 Identities=24% Similarity=0.311 Sum_probs=152.1
Q ss_pred HHHHHHHhhcccccCcc--cCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeec
Q 042766 697 YAELSKATSEFSSSNMI--GQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSS 773 (914)
Q Consensus 697 ~~~~~~~~~~~~~~~~l--g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 773 (914)
..+.....++|++.+.+ |+|+||.||+++.+.+++.+|+|.+........ |+.....+ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEec
Confidence 44555556677877777 999999999999999999999999864432211 23222222 79999999998644
Q ss_pred CCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC
Q 042766 774 TDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM 853 (914)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~ 853 (914)
.+..++||||+++++|.+++... ..+++.++..++.|+++|++|||+. +++||||||+||+++.++
T Consensus 81 -----~~~~~iv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~ 146 (267)
T PHA03390 81 -----LKGHVLIMDYIKDGDLFDLLKKE------GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAK 146 (267)
T ss_pred -----CCeeEEEEEcCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCC
Confidence 34789999999999999999754 3689999999999999999999999 999999999999999998
Q ss_pred -cEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 854 -VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 854 -~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.++|+|||+++..... ....||..|+|||++. +.++|+||+||++++|+
T Consensus 147 ~~~~l~dfg~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~ 200 (267)
T PHA03390 147 DRIYLCDYGLCKIIGTP------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELL 200 (267)
T ss_pred CeEEEecCccceecCCC------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHH
Confidence 9999999998754321 1235899999999984 47799999999999873
No 342
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.94 E-value=1.2e-26 Score=251.47 Aligned_cols=188 Identities=21% Similarity=0.286 Sum_probs=155.7
Q ss_pred cccccCcccCCccEEEEEEEEC---CCcEEEEEEEeeccC----CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCC
Q 042766 706 EFSSSNMIGQGRFGTVYKGILG---DDEMVVAVKVINLKQ----KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFE 777 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 777 (914)
+|++.+.||+|+||.||+|+.. .+|+.||+|+++... ....+.+.+|+++++++ +|++|+++++++ +
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-----Q 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe-----e
Confidence 4778899999999999999884 478899999986432 22346788999999999 599999998874 3
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEE
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHV 857 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki 857 (914)
.....++||||+++++|.+++... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 146 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQR------ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVL 146 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEE
Confidence 345789999999999999998754 3578888999999999999999998 9999999999999999999999
Q ss_pred ecccccccccccccccccCCCCccccccCcccccccchhh------hhhcccCcccccccccC
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~~~~~~f 914 (914)
+|||+++........ ......|+..|+|||.+. +.++|+||+||++++|+
T Consensus 147 ~dfg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll 202 (290)
T cd05613 147 TDFGLSKEFHEDEVE-------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELL 202 (290)
T ss_pred eeCccceeccccccc-------ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHh
Confidence 999999865432211 112356899999999984 36799999999999874
No 343
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.94 E-value=1.2e-26 Score=246.19 Aligned_cols=182 Identities=30% Similarity=0.459 Sum_probs=152.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
++|++.+.||+|+||.||+|+. +++.||+|.++.. ...+.+.+|+.++++++||||+++++++.. +..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------~~~~~ 75 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILH------NGLYI 75 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcC------CCcEE
Confidence 5789999999999999999875 5678999998533 234678899999999999999999998643 23689
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++++|.+++..... ..+++..++.++.|++.|+.|+|+. +++||||||+||+++.++.+||+|||.++
T Consensus 76 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~ 148 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGR----ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLAR 148 (254)
T ss_pred EEECCCCCCHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccce
Confidence 9999999999999976432 4578889999999999999999998 99999999999999999999999999987
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
...... .....+..|+|||++. +.++|+||+||+++||+
T Consensus 149 ~~~~~~-----------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~ 191 (254)
T cd05083 149 VGSMGV-----------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVF 191 (254)
T ss_pred eccccC-----------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHH
Confidence 542210 0123456899999874 47899999999999874
No 344
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.94 E-value=7e-27 Score=253.01 Aligned_cols=188 Identities=25% Similarity=0.349 Sum_probs=157.8
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|+..+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|++++++++|+||+++++++.. .+..+
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 76 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-----KGRLY 76 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-----CCEEE
Confidence 6888999999999999999999899999999986432 3345788999999999999999999998644 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||++++.+..+.... ..+++.++..++.|++.|++|||+. +++|||+||+||+++.++.+||+|||++
T Consensus 77 iv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~ 147 (288)
T cd07833 77 LVFEYVERTLLELLEASP------GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFA 147 (288)
T ss_pred EEEecCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecc
Confidence 999999987776655432 3578899999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+....... .......|+..|+|||++. +.++|+||+||++++|+
T Consensus 148 ~~~~~~~~-------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~ 196 (288)
T cd07833 148 RALRARPA-------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELL 196 (288)
T ss_pred cccCCCcc-------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHH
Confidence 87543221 0112356889999999974 36799999999999875
No 345
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.94 E-value=7.6e-27 Score=258.96 Aligned_cols=194 Identities=26% Similarity=0.379 Sum_probs=157.8
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCC---------
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTD--------- 775 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--------- 775 (914)
++|.+.+.||+|+||.||+|++..+++.||+|++........+.+.+|++++++++||||+++++++....
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 68999999999999999999999999999999997666666678899999999999999999987754322
Q ss_pred CCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC-CCc
Q 042766 776 FEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY-DMV 854 (914)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~-~~~ 854 (914)
+......++||||++ ++|.+++.. ..+++..+..++.|++.|+.|||+. +|+||||||+||+++. ++.
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~-------~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~ 153 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ-------GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLV 153 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCce
Confidence 111235789999996 589888754 2578899999999999999999998 9999999999999974 567
Q ss_pred EEEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+|++|||.++........ ........||..|+|||++. +.++|+||+||++++|+
T Consensus 154 ~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~ 213 (342)
T cd07854 154 LKIGDFGLARIVDPHYSH-----KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML 213 (342)
T ss_pred EEECCcccceecCCcccc-----ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHH
Confidence 899999999765322110 01111235889999999873 36899999999999874
No 346
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.94 E-value=1.3e-26 Score=249.50 Aligned_cols=186 Identities=27% Similarity=0.367 Sum_probs=157.4
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
-|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~l 79 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-----DTKLWI 79 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe-----CCeEEE
Confidence 4777889999999999999998889999999986433 2334678899999999999999999998643 347899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++++|.+++.. ..+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||+++
T Consensus 80 v~e~~~~~~l~~~i~~-------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06641 80 IMEYLGGGSALDLLEP-------GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAG 149 (277)
T ss_pred EEEeCCCCcHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccce
Confidence 9999999999999864 3578899999999999999999998 99999999999999999999999999987
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
....... ......|+..|+|||.+. +.++|+||+||++++|+
T Consensus 150 ~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~ 195 (277)
T cd06641 150 QLTDTQI--------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 195 (277)
T ss_pred ecccchh--------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHH
Confidence 6543211 112246889999999884 46899999999998874
No 347
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.94 E-value=1.9e-26 Score=252.01 Aligned_cols=183 Identities=27% Similarity=0.356 Sum_probs=154.5
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC---cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
..|+..+.||+|+||.||+|++..+++.||+|++..... ...+++.+|++++++++||||+++++++... +.
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~-----~~ 89 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE-----HT 89 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC-----Ce
Confidence 458888999999999999999988899999999864332 2335688999999999999999999997543 46
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||++ |++.+++.... ..+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.+||+|||
T Consensus 90 ~~lv~e~~~-g~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg 160 (307)
T cd06607 90 AWLVMEYCL-GSASDILEVHK-----KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFG 160 (307)
T ss_pred EEEEHHhhC-CCHHHHHHHcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecC
Confidence 899999996 57877775432 3588999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-------hhhcccCccccccccc
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~ 913 (914)
+++..... ....|++.|+|||++. +.++|+|||||+++||
T Consensus 161 ~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el 207 (307)
T cd06607 161 SASLVSPA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207 (307)
T ss_pred cceecCCC------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHH
Confidence 98754211 1246889999999873 4689999999999986
No 348
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.94 E-value=1.3e-26 Score=256.88 Aligned_cols=195 Identities=27% Similarity=0.375 Sum_probs=158.9
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 779 (914)
..++|++.+.||+|+||.||+|++..+++.||+|++... .......+.+|+.+++++ +||||+++++++... ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~---~~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE---ND 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC---CC
Confidence 356899999999999999999999888999999988532 223345677899999999 999999999986432 23
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||++ ++|.+++... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d 150 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRAN-------ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLAD 150 (337)
T ss_pred ceEEEEecccc-cCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEee
Confidence 46799999997 5999988642 567888899999999999999998 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
||+++......... .........||+.|+|||++. +.++|+|||||++++|+
T Consensus 151 ~g~~~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~ 207 (337)
T cd07852 151 FGLARSLSELEENP---ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEML 207 (337)
T ss_pred ccchhccccccccc---cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHH
Confidence 99998664322110 011223457999999999873 47899999999999874
No 349
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.94 E-value=1.9e-26 Score=250.50 Aligned_cols=189 Identities=26% Similarity=0.393 Sum_probs=154.4
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|+..+.||+|++|.||+|++..+++.||+|.+.... ....+.+.+|++++++++||||+++++++.. ....
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec-----CCeE
Confidence 47889999999999999999999899999999986432 2334678899999999999999999999643 3578
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC-CCcEEEeccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY-DMVAHVGDFG 861 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DFG 861 (914)
++||||++ +++.+++..... ...++..+..++.|++.|++|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 77 ~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDSSPD----FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred EEEEeccc-ccHHHHHHhCCC----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccc
Confidence 99999995 588888765432 3467788889999999999999999 9999999999999985 5679999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+++...... .......|++.|+|||++. +.++|+||+||++++|+
T Consensus 149 ~~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~ 198 (294)
T PLN00009 149 LARAFGIPV--------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMV 198 (294)
T ss_pred cccccCCCc--------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 997543211 0111235789999999885 36799999999999874
No 350
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.94 E-value=4.2e-27 Score=252.63 Aligned_cols=186 Identities=27% Similarity=0.496 Sum_probs=158.2
Q ss_pred ccccCcccCCccEEEEEEEECC----CcEEEEEEEeecc-CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 707 FSSSNMIGQGRFGTVYKGILGD----DEMVVAVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
....+.||+|-||.||+|.+.. ....||||..+.+ .....+.|.+|+.+|++++|||||+++|+|... .
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~------P 464 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ------P 464 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc------c
Confidence 3456789999999999999853 2356899988753 345578999999999999999999999998654 4
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.|||||.++.|.|.+|++..+ ..++......++.||+.|++|||+. ..|||||..+|||+....-||++|||
T Consensus 465 ~WivmEL~~~GELr~yLq~nk-----~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFG 536 (974)
T KOG4257|consen 465 MWIVMELAPLGELREYLQQNK-----DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFG 536 (974)
T ss_pred eeEEEecccchhHHHHHHhcc-----ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccc
Confidence 899999999999999999876 5788889999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchh----hhhhcccCccccccccc
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~ 913 (914)
++|.+.+..+..+.. ..=...|||||-+ ++.++|+|=||+.+-|.
T Consensus 537 LSR~~ed~~yYkaS~-------~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEI 585 (974)
T KOG4257|consen 537 LSRYLEDDAYYKASR-------GKLPIKWMAPESINFRRFTTASDVWMFGVCMWEI 585 (974)
T ss_pred hhhhccccchhhccc-------cccceeecCccccchhcccchhhHHHHHHHHHHH
Confidence 999988766543331 1234579999998 57999999999877654
No 351
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.94 E-value=2.1e-26 Score=246.19 Aligned_cols=195 Identities=26% Similarity=0.336 Sum_probs=162.3
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
++|++.+.||+|+||+||+|....++..||+|++.... ....+.+.+|+++++.++|+||+++++.+.. ....+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVV-----GDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEee-----CCEEE
Confidence 36889999999999999999998889999999986433 2345788999999999999999999988543 45789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++..... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+|++|||++
T Consensus 76 iv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYP---RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred EEEeccCCCcHHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 99999999999999975321 13578999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
..+....... ........|+..|+|||++. +.++|+||+||++++|+
T Consensus 150 ~~~~~~~~~~----~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~ 201 (267)
T cd06610 150 ASLADGGDRT----RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELA 201 (267)
T ss_pred HHhccCcccc----ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHH
Confidence 8765432110 01123456999999999974 46899999999999874
No 352
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.94 E-value=1.9e-26 Score=251.60 Aligned_cols=197 Identities=25% Similarity=0.379 Sum_probs=160.3
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCC----
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTD---- 775 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 775 (914)
...++|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35578999999999999999999999899999999997543 233456788999999999999999999875432
Q ss_pred -CCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc
Q 042766 776 -FEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV 854 (914)
Q Consensus 776 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~ 854 (914)
.+.....++||||+++ ++.+.+.... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~ 154 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL-----VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQ 154 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCc
Confidence 1123378999999975 7777776432 4689999999999999999999999 9999999999999999999
Q ss_pred EEEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+||+|||.++....... .......++..|+|||++. +.++|+||+||++++|+
T Consensus 155 ~kl~dfg~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~ 212 (302)
T cd07864 155 IKLADFGLARLYNSEES-------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 212 (302)
T ss_pred EEeCcccccccccCCcc-------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHH
Confidence 99999999986543221 0111234688899999874 47899999999998874
No 353
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.94 E-value=1.1e-26 Score=247.97 Aligned_cols=188 Identities=24% Similarity=0.345 Sum_probs=154.3
Q ss_pred ccCCccEEEEEEEECCCcEEEEEEEeeccCC---cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecc
Q 042766 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYM 789 (914)
Q Consensus 713 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 789 (914)
||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++.+ +.....++||||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF-----QGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhe-----ecCcEEEEEEecC
Confidence 6899999999999998899999999864432 3456788999999999999999998874 3445789999999
Q ss_pred cCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccc
Q 042766 790 ENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869 (914)
Q Consensus 790 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~ 869 (914)
++++|.+++... ..+++..++.++.|++.||+|||+. +++||||+|+||+++.++.+||+|||++......
T Consensus 76 ~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 76 PGGDLASLLENV------GSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred CCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 999999999764 3688999999999999999999999 9999999999999999999999999998764332
Q ss_pred ccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 870 HLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 870 ~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
................++..|+|||... +.++|+||+||++++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~ 195 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFL 195 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHH
Confidence 1110000011223456889999999985 46899999999998864
No 354
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.94 E-value=1.7e-26 Score=252.99 Aligned_cols=202 Identities=23% Similarity=0.359 Sum_probs=160.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhcCCCCcceEEeEeecCCC---CC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRHRNLIKIITICSSTDF---EG 778 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~~ 778 (914)
.++|++.+.||+|+||.||+|++..+++.||+|++..... .....+.+|++++++++||||+++++++..... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 4689999999999999999999998999999999864432 223467889999999999999999987644321 12
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
....++||||+++ ++.+.+.... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~ 157 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS-----VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIA 157 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEC
Confidence 3457999999964 7777776432 4689999999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccC---CCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASK---TPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~---~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|||+++............ .........||+.|+|||++. +.++|+||+||++++|+
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~ 221 (311)
T cd07866 158 DFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMF 221 (311)
T ss_pred cCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHH
Confidence 999998654322111100 111223456899999999874 46799999999999874
No 355
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.94 E-value=3e-26 Score=251.57 Aligned_cols=183 Identities=28% Similarity=0.352 Sum_probs=154.0
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC---cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.|+..+.||+|+||.||+|++..++..||+|++..... .....+.+|++++++++|||++++++++... ...
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~ 100 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE-----HTA 100 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC-----CeE
Confidence 36778899999999999999998999999999864322 2335788999999999999999999986543 468
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||++ |++.+.+.... ..+++.++..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 101 ~lv~e~~~-g~l~~~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~ 171 (317)
T cd06635 101 WLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGS 171 (317)
T ss_pred EEEEeCCC-CCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCC
Confidence 99999996 58888776443 4688999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-------hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~f 914 (914)
+...... ....|++.|+|||++. +.++|+||+||++++|+
T Consensus 172 ~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~ 218 (317)
T cd06635 172 ASIASPA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 218 (317)
T ss_pred ccccCCc------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHH
Confidence 8754321 1246899999999973 47899999999999874
No 356
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.94 E-value=2.4e-26 Score=245.18 Aligned_cols=179 Identities=26% Similarity=0.333 Sum_probs=153.2
Q ss_pred ccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecc
Q 042766 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYM 789 (914)
Q Consensus 713 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 789 (914)
||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++. .....++||||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFK-----DKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEE-----cCCccEEEEecC
Confidence 699999999999999889999999997433 234467899999999999999999999854 344789999999
Q ss_pred cCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccc
Q 042766 790 ENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869 (914)
Q Consensus 790 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~ 869 (914)
++++|.+++.+. ..+++..+..++.|++.|++|+|++ +++|+||||+||+++.++.+||+|||.++.....
T Consensus 76 ~~~~L~~~l~~~------~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 76 LGGELWTILRDR------GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred CCCcHHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 999999999764 3478889999999999999999998 9999999999999999999999999999865432
Q ss_pred ccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 870 HLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 870 ~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
. ......|++.|+|||.+. +.++|+||+||++|+|+
T Consensus 147 ~---------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~ 186 (262)
T cd05572 147 Q---------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELL 186 (262)
T ss_pred c---------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHH
Confidence 1 112346899999999984 47799999999999874
No 357
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.94 E-value=1.4e-26 Score=250.73 Aligned_cols=182 Identities=23% Similarity=0.335 Sum_probs=155.1
Q ss_pred cCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecc
Q 042766 710 SNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYM 789 (914)
Q Consensus 710 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 789 (914)
...||+|+||.||+|+...+++.||||++........+.+.+|+.++++++|+||+++++++.. .+..++||||+
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e~~ 99 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-----GDELWVVMEFL 99 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEe-----CCEEEEEEecC
Confidence 4679999999999999998999999999865555556678999999999999999999998543 45789999999
Q ss_pred cCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccc
Q 042766 790 ENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869 (914)
Q Consensus 790 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~ 869 (914)
++++|.+++.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 100 ~~~~L~~~~~~-------~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~ 169 (292)
T cd06657 100 EGGALTDIVTH-------TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 169 (292)
T ss_pred CCCcHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccc
Confidence 99999998754 2478889999999999999999999 9999999999999999999999999998755322
Q ss_pred ccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 870 HLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 870 ~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
. .......||+.|+|||++. +.++|+||+||++++|+
T Consensus 170 ~--------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~ 210 (292)
T cd06657 170 V--------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 210 (292)
T ss_pred c--------ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHH
Confidence 1 1112346899999999884 57899999999999874
No 358
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.94 E-value=1.5e-26 Score=255.17 Aligned_cols=191 Identities=18% Similarity=0.213 Sum_probs=151.2
Q ss_pred CcccCC--ccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQG--RFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G--~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
..||+| +||+||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.. .+..++||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-----~~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT-----GSWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec-----CCceEEEE
Confidence 456776 99999999999999999999987543 2234678899999999999999999999643 44789999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||++++++.+++.+... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.+...
T Consensus 79 e~~~~~~l~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~ 151 (328)
T cd08226 79 PFMAYGSANSLLKTYFP----EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSL 151 (328)
T ss_pred ecccCCCHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhh
Confidence 99999999999876532 3588899999999999999999998 9999999999999999999999999866433
Q ss_pred cccccccccCCCCccccccCcccccccchhh------hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~~~~~~f 914 (914)
.......... ........++..|||||++. +.++|+||+||++|+|+
T Consensus 152 ~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~ 204 (328)
T cd08226 152 VRNGQKAKVV-YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELA 204 (328)
T ss_pred hccCcccccc-ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHH
Confidence 2211110000 00011224667899999984 36789999999999874
No 359
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.94 E-value=1.4e-28 Score=251.95 Aligned_cols=396 Identities=19% Similarity=0.244 Sum_probs=202.5
Q ss_pred CCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhccccccccc-ccccCCCCCccc
Q 042766 164 QIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAE-NQFSGMFPRSIC 242 (914)
Q Consensus 164 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~ 242 (914)
.+|..+.. .-.+++|..|+|+...|.+|+.+.+|+.||||+|+|+.+-|.+|.++++|..|-+-+ |+|+......|.
T Consensus 60 eVP~~LP~--~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~ 137 (498)
T KOG4237|consen 60 EVPANLPP--ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFG 137 (498)
T ss_pred cCcccCCC--cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhh
Confidence 45554432 455667777777755556677777777777777777766677777777666655554 667655556666
Q ss_pred cccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccC------------Cccc
Q 042766 243 NISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQF------------KGKV 310 (914)
Q Consensus 243 ~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l------------~~~~ 310 (914)
+|.+|+.|.+.-|++.- ++.+.+..+++|..|.|-.|.++.+--.+|..+.+++.+.+..|.+ ....
T Consensus 138 gL~slqrLllNan~i~C-ir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~ 216 (498)
T KOG4237|consen 138 GLSSLQRLLLNANHINC-IRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMN 216 (498)
T ss_pred hHHHHHHHhcChhhhcc-hhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhc
Confidence 66666666666666653 3445556666666666666666633333666666666666666652 1122
Q ss_pred cccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCC
Q 042766 311 SIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIP 390 (914)
Q Consensus 311 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p 390 (914)
|..+++.+...-..+.++++....+..+ ...+.++..=..+.....+..|..
T Consensus 217 ~ietsgarc~~p~rl~~~Ri~q~~a~kf-----~c~~esl~s~~~~~d~~d~~cP~~----------------------- 268 (498)
T KOG4237|consen 217 PIETSGARCVSPYRLYYKRINQEDARKF-----LCSLESLPSRLSSEDFPDSICPAK----------------------- 268 (498)
T ss_pred hhhcccceecchHHHHHHHhcccchhhh-----hhhHHhHHHhhccccCcCCcChHH-----------------------
Confidence 3333344444444444444443332221 111111111111111122233332
Q ss_pred ccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCC
Q 042766 391 PGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQN 470 (914)
Q Consensus 391 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 470 (914)
+|.++++|++|+|++|+++++-+.+|.++.++++|.|..|+|.......|.++..|+.|+|.+|+|+..-|.+|..+..
T Consensus 269 -cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~ 347 (498)
T KOG4237|consen 269 -CFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFS 347 (498)
T ss_pred -HHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccce
Confidence 3444555555555555555444455555555555555555544444444444555555555555554444444544444
Q ss_pred ccccccCCCccCC-----------------CCchhhhcccchhhhhcccCCccCC---Ccccccc---------ccccce
Q 042766 471 LILFIASYNKLTG-----------------DLPQQLLSITTLSLVLDLSNNLLNG---SLPLQVG---------NLKNLV 521 (914)
Q Consensus 471 L~~L~l~~N~l~~-----------------~~p~~~~~~~~l~~~L~Ls~N~l~~---~~p~~~~---------~l~~L~ 521 (914)
|..|++-.|.+.- ..|.. .-+.....++++.+.+.. ..|.+.+ ..+-+.
T Consensus 348 l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~C--q~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~ 425 (498)
T KOG4237|consen 348 LSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRC--QSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLD 425 (498)
T ss_pred eeeeehccCcccCccchHHHHHHHhhCCCCCCCCC--CCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhh
Confidence 4444444444321 11110 000111233333333321 0111111 111111
Q ss_pred -eecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCC
Q 042766 522 -MLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYN 600 (914)
Q Consensus 522 -~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 600 (914)
+..-|++.+. .+|..+- ..-.+|++.+|.++ .+|.+ .+.+| .+|+|+|+++...-..|.++++|.+|-||+|
T Consensus 426 tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 426 TVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hhHhhcccchh-hcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 1223333333 3333322 23456788888887 55655 56677 7888888888777778888888888888876
No 360
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.94 E-value=2.6e-26 Score=254.90 Aligned_cols=196 Identities=22% Similarity=0.336 Sum_probs=161.6
Q ss_pred HHHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecC
Q 042766 697 YAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSST 774 (914)
Q Consensus 697 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 774 (914)
..++....++|+..+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|++++++++||||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 3456667789999999999999999999998899999999986432 22345788899999999999999999986533
Q ss_pred C-CCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC
Q 042766 775 D-FEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM 853 (914)
Q Consensus 775 ~-~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~ 853 (914)
. ++.....+++++++ +++|.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKC-------QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDC 157 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCC
Confidence 2 22334568888887 7899988764 3578899999999999999999999 999999999999999999
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
.+||+|||+++..... .....||+.|+|||.+. +.++|+||+||++++|+
T Consensus 158 ~~kl~dfg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~ 212 (345)
T cd07877 158 ELKILDFGLARHTDDE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 212 (345)
T ss_pred CEEEeccccccccccc-----------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHH
Confidence 9999999998754221 12346899999999874 46899999999999874
No 361
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.94 E-value=2.4e-26 Score=254.06 Aligned_cols=194 Identities=23% Similarity=0.306 Sum_probs=156.7
Q ss_pred cccccCcccCCccEEEEEEEECCC--cEEEEEEEeecc--CCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCc
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDD--EMVVAVKVINLK--QKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 780 (914)
+|++.+.||+|+||.||+|++..+ +..||+|++... .....+.+.+|+++++++ +||||+++++++.... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP-GNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-ccCC
Confidence 477889999999999999999877 889999998632 222346788999999999 5999999998754321 2334
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..+++|||++ ++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Df 149 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSG------QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDF 149 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcC
Confidence 5789999985 6999988654 4688999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+++.+...... .........||+.|+|||+.. +.++|+||+||++++|+
T Consensus 150 g~a~~~~~~~~~----~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~ 204 (332)
T cd07857 150 GLARGFSENPGE----NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELL 204 (332)
T ss_pred CCceeccccccc----ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 999866432211 111122457999999999874 46899999999998864
No 362
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=1e-27 Score=260.33 Aligned_cols=187 Identities=25% Similarity=0.371 Sum_probs=165.3
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
++|+..+.+|.|+||.||+|++..+++..|+|+++........-..+|+-+++.++|||||.++|-+... +..|+
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~-----dklwi 89 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRR-----DKLWI 89 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhh-----cCcEE
Confidence 5788899999999999999999999999999999988777778888999999999999999999985433 47899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
.||||.||+|++..+.. .++++.+...+++...+|++|+|+. +-+|||||-.||++++.|.+|++|||.+.
T Consensus 90 cMEycgggslQdiy~~T------gplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsa 160 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYHVT------GPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSA 160 (829)
T ss_pred EEEecCCCcccceeeec------ccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchh
Confidence 99999999999988755 4788889999999999999999999 89999999999999999999999999987
Q ss_pred cccccccccccCCCCccccccCcccccccchh-------hhhhcccCccccccccc
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF-------FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~-------~~~~~Di~s~g~~~~~~ 913 (914)
.+.... ..+..+.|||+|||||+. ++..+|+|+.|+|.+|+
T Consensus 161 qitati--------~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel 208 (829)
T KOG0576|consen 161 QITATI--------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIEL 208 (829)
T ss_pred hhhhhh--------hhhhcccCCccccchhHHHHHhcccccccccccccccchhhh
Confidence 654321 223457899999999998 56999999999998874
No 363
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.93 E-value=2.7e-26 Score=248.29 Aligned_cols=189 Identities=26% Similarity=0.419 Sum_probs=158.0
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|++++++++|||++++++++.... .+..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG---KGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC---CCcEEE
Confidence 567789999999999999999889999999997653 334567889999999999999999999975431 257899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++ +|.+++.... ..+++.+++.++.|++.|++|||+. +++|+||||+||++++++.+||+|||.++
T Consensus 78 v~e~~~~-~l~~~~~~~~-----~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~ 148 (287)
T cd07840 78 VFEYMDH-DLTGLLDSPE-----VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLAR 148 (287)
T ss_pred Eeccccc-cHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEcccccee
Confidence 9999974 8998887542 3688999999999999999999998 99999999999999999999999999998
Q ss_pred cccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
....... .......++..|+|||.+. +.++|+|||||+++||+
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~ 196 (287)
T cd07840 149 PYTKRNS-------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELF 196 (287)
T ss_pred eccCCCc-------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHH
Confidence 6643221 0112245788999999763 47899999999999874
No 364
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.93 E-value=3.5e-26 Score=247.33 Aligned_cols=190 Identities=25% Similarity=0.363 Sum_probs=162.4
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
....|+..+.||+|+||.||+|++..++..||+|+++.... ..+.+.+|++++++++|+||+++++++... ...
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~ 90 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVG-----DEL 90 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC-----CEE
Confidence 45568888999999999999999988899999999975544 456788999999999999999999986543 478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++|+||+++++|.+++.... ..+++.++..++.|++.|++|||+. +|+|+|+||+||+++.++.+||+|||.
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~ 162 (286)
T cd06614 91 WVVMEYMDGGSLTDIITQNF-----VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGF 162 (286)
T ss_pred EEEEeccCCCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccch
Confidence 99999999999999998653 3689999999999999999999998 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........ ......|++.|+|||++. +.++|+|||||++|+|+
T Consensus 163 ~~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~ 210 (286)
T cd06614 163 AAQLTKEKS--------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMA 210 (286)
T ss_pred hhhhccchh--------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHH
Confidence 875533211 112345889999999884 57899999999999874
No 365
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.93 E-value=2.8e-26 Score=247.54 Aligned_cols=186 Identities=22% Similarity=0.311 Sum_probs=152.4
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCceEeE
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
|++.+.||+|+||.||+|++..+++.||+|+++... ........+|+.+++++. ||||+++++++.... .+..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~---~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRK---TGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCC---CCcEEE
Confidence 567789999999999999999899999999986432 222334567999999885 999999999975431 246899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||++ +++.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++. +.+||+|||+++
T Consensus 78 v~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 78 VFELMD-MNLYELIKGRK-----RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred EEecCC-ccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccc
Confidence 999996 58888886542 3689999999999999999999999 9999999999999999 999999999998
Q ss_pred cccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
...... ......+|+.|+|||++. +.++|+||+||+++||+
T Consensus 148 ~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~ 193 (282)
T cd07831 148 GIYSKP---------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEIL 193 (282)
T ss_pred ccccCC---------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHH
Confidence 653221 111245889999999863 57899999999999874
No 366
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=4e-27 Score=252.05 Aligned_cols=188 Identities=24% Similarity=0.522 Sum_probs=161.5
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
.+....++||-|.||.||.|.|+.-...||||.++ ++....++|.+|+.+|+.++|||+|+++|+|.... ..||
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLK-EDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep-----PFYI 340 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP-----PFYI 340 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhh-hcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCC-----CeEE
Confidence 45667789999999999999999888999999986 55667889999999999999999999999987544 6799
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
|.|||.+|+|.+|+++..+ ..++....+.++.||+.|++||..+ ++|||||..+|+|+.++..|||+|||+++
T Consensus 341 iTEfM~yGNLLdYLRecnr----~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsR 413 (1157)
T KOG4278|consen 341 ITEFMCYGNLLDYLRECNR----SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSR 413 (1157)
T ss_pred EEecccCccHHHHHHHhch----hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhh
Confidence 9999999999999987643 4566777889999999999999998 99999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccc
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVH 912 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~ 912 (914)
++..+.+.... +..-...|.|||-+ ++.++|+|+||+.+.|
T Consensus 414 lMtgDTYTAHA-------GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWE 458 (1157)
T KOG4278|consen 414 LMTGDTYTAHA-------GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWE 458 (1157)
T ss_pred hhcCCceeccc-------CccCcccccCcccccccccccchhhHHHHHHHHH
Confidence 98765432211 12234579999998 5799999999998755
No 367
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.93 E-value=2.4e-26 Score=248.13 Aligned_cols=187 Identities=26% Similarity=0.400 Sum_probs=155.8
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
|+..+.||+|++|.||+|++..+++.||+|++.... ....+.+.+|++++++++|||++++++++. .....++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~-----~~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH-----SENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec-----cCCeEEE
Confidence 567789999999999999999899999999987543 233467889999999999999999999854 3357899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||++ ++|.+++..... ..+++..++.++.|+++|++|||+. +++||||+|+||+++.++.+||+|||+++
T Consensus 76 v~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~ 147 (283)
T cd07835 76 VFEFLD-LDLKKYMDSSPL----TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLAR 147 (283)
T ss_pred EEeccC-cCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence 999995 699999876432 3689999999999999999999998 99999999999999999999999999997
Q ss_pred cccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
....... ......+++.|+|||++. +.++|+||+||++++|+
T Consensus 148 ~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~ 194 (283)
T cd07835 148 AFGVPVR--------TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMV 194 (283)
T ss_pred ccCCCcc--------ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHH
Confidence 5432110 111235788999999873 46799999999999873
No 368
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.93 E-value=2.3e-26 Score=244.42 Aligned_cols=189 Identities=23% Similarity=0.350 Sum_probs=158.1
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|+..+.||+|+||.||+|++..++..||+|.+.... ....+.+.+|++++++++|+||+++++++. .....+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQ-----ENGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheec-----cCCeEE
Confidence 4778899999999999999999999999999986542 234467889999999999999999999853 345789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC-cEEEecccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM-VAHVGDFGL 862 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~-~~ki~DFGl 862 (914)
+|+||+++++|.+++..... ..+++..+..++.|+++|++|||+. +++|+||||+||++++++ .+|++|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQRG----VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred EEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEeccccc
Confidence 99999999999999975432 3578999999999999999999999 999999999999999885 579999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........ ......|++.|+|||++. +.++|+||+||++++|+
T Consensus 149 ~~~~~~~~~--------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~ 196 (257)
T cd08225 149 ARQLNDSME--------LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELC 196 (257)
T ss_pred chhccCCcc--------cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHH
Confidence 976543211 111245899999999884 47899999999999874
No 369
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=9.2e-28 Score=246.01 Aligned_cols=277 Identities=22% Similarity=0.213 Sum_probs=148.7
Q ss_pred eEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecC-CCCCCCcCCCCccccCCcchhccC
Q 042766 79 LTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALS-NNSFSGTIPTNLSRCSNLIHFCAS 157 (914)
Q Consensus 79 v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls-~N~l~~~~p~~l~~l~~L~~L~Ls 157 (914)
.++++|..|+++...+.+|..+..||+||||+|+|+..-|++|..|.+|..|-+- +|+|+...-..|+.|..|+.|.+.
T Consensus 69 tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllN 148 (498)
T KOG4237|consen 69 TVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLN 148 (498)
T ss_pred ceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcC
Confidence 3455555555554444445555555555555555555555555555554333332 255553222345555555555555
Q ss_pred CCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCC------------CCCCCCccchhhhcccc
Q 042766 158 NNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENS------------LGGKIPTTLGLLRRLVN 225 (914)
Q Consensus 158 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~------------l~~~~p~~~~~l~~L~~ 225 (914)
-|++.-...++|..+++|..|.+.+|.+...--.+|..+.+++.+.+..|. .....|..++..+...-
T Consensus 149 an~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p 228 (498)
T KOG4237|consen 149 ANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSP 228 (498)
T ss_pred hhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecch
Confidence 555554444555555555555555555552222255555555555555555 22233444444444444
Q ss_pred cccccccccCCCCCccc-cccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCc
Q 042766 226 LNVAENQFSGMFPRSIC-NISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSN 304 (914)
Q Consensus 226 L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 304 (914)
..+.++++....+..|. .+.++..-..+.....++.|...|..+++|++|+|++|+|+++-+.+|..+..++.|.|..|
T Consensus 229 ~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N 308 (498)
T KOG4237|consen 229 YRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRN 308 (498)
T ss_pred HHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcc
Confidence 44555544433333332 12222222233333445566666666677777777777776666666666666777777777
Q ss_pred cCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccC
Q 042766 305 QFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFG 361 (914)
Q Consensus 305 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 361 (914)
+|..+....|.++..|++|+|.+|+|+.+ .|.+|..+.+|.+|.|-.|.+.
T Consensus 309 ~l~~v~~~~f~~ls~L~tL~L~~N~it~~------~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 309 KLEFVSSGMFQGLSGLKTLSLYDNQITTV------APGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred hHHHHHHHhhhccccceeeeecCCeeEEE------ecccccccceeeeeehccCccc
Confidence 66666666666666666666666666665 3334555556666666665553
No 370
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.93 E-value=3.7e-26 Score=253.48 Aligned_cols=190 Identities=23% Similarity=0.324 Sum_probs=157.2
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC-CCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDF-EGV 779 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~ 779 (914)
..++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++..... ...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 4568999999999999999999999899999999985432 2234568899999999999999999998653321 112
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+ +++|.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~-------~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~d 161 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH-------EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILD 161 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 3468999999 7799988864 3578899999999999999999998 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
||+++..... .....|++.|+|||++. +.++|+||+||++++++
T Consensus 162 fg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~ 210 (343)
T cd07880 162 FGLARQTDSE-----------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEML 210 (343)
T ss_pred cccccccccC-----------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 9999754321 11346889999999874 36899999999998864
No 371
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.93 E-value=2.1e-26 Score=254.59 Aligned_cols=194 Identities=25% Similarity=0.314 Sum_probs=161.1
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++...........+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4788899999999999999999889999999987543 34456889999999999999999999986554323334689
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||++ ++|.+++... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++
T Consensus 81 lv~e~~~-~~l~~~l~~~------~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 81 IVTELME-TDLHKVIKSP------QPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred EEecchh-hhHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCce
Confidence 9999997 5899988754 3688999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhhh-----hhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM-----LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~-----~~~Di~s~g~~~~~~f 914 (914)
......... ........||+.|+|||++.+ .++|+||+||++++|+
T Consensus 151 ~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~ 201 (330)
T cd07834 151 RGVDPDEDE-----KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELL 201 (330)
T ss_pred Eeecccccc-----cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHH
Confidence 876543211 011223468999999999853 5899999999999874
No 372
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.93 E-value=3.1e-26 Score=266.59 Aligned_cols=198 Identities=20% Similarity=0.184 Sum_probs=136.4
Q ss_pred HhhcccccCcccCCccEEEEEEEECCC----cEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeec-CCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDD----EMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSS-TDFE 777 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 777 (914)
..++|+..+.||+|+||.||+|++..+ +..||+|++.... ..+....| .++...+.+++.+...+.. ....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~--~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG--AVEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc--hhHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 457899999999999999999999888 8999999875322 11111111 1122222233222211111 1113
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcc--------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCC
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQV--------------EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlk 843 (914)
.....++||||+++++|.+++....... .........+..++.|++.||+|||++ +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 3457899999999999999987542100 001112334567999999999999998 99999999
Q ss_pred CCCeeecC-CCcEEEecccccccccccccccccCCCCccccccCcccccccchhhh------------------------
Q 042766 844 PSNVLLDY-DMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM------------------------ 898 (914)
Q Consensus 844 p~NILl~~-~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~------------------------ 898 (914)
|+|||++. ++.+||+|||+|+.+..... .......||+.|||||++..
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~-------~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~ 355 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGIN-------YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLN 355 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccc-------cCCcccccCCCccChHHhhccCCCCCCccccccccccchhcccc
Confidence 99999986 58999999999986543211 11124679999999997631
Q ss_pred --hhcccCcccccccccC
Q 042766 899 --LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 899 --~~~Di~s~g~~~~~~f 914 (914)
.++||||+||++|||.
T Consensus 356 ~~~k~DVwSlGviL~el~ 373 (566)
T PLN03225 356 LPDRFDIYSAGLIFLQMA 373 (566)
T ss_pred CCCCcccHHHHHHHHHHH
Confidence 2359999999999973
No 373
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.93 E-value=8.3e-26 Score=244.44 Aligned_cols=191 Identities=26% Similarity=0.425 Sum_probs=156.2
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhc---CCCCcceEEeEeecCCCCCCce
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNI---RHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~~~~ 781 (914)
|++.+.||+|+||.||+|+++.+++.||+|+++.... .....+.+|+++++++ +||||+++++++...+......
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 5677899999999999999988899999999974322 2234667788877666 5999999999987655333345
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.+++|||++ +++.+++..... ..+++.+++.++.|++.|++|||+. +++|+|+||+||+++.++.+||+|||
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~----~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK----PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccC
Confidence 899999996 589998875432 3589999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.++.+..... .....++..|+|||++. +.++|+|||||++++|+
T Consensus 153 ~~~~~~~~~~---------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~ 200 (287)
T cd07838 153 LARIYSFEMA---------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELF 200 (287)
T ss_pred cceeccCCcc---------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHH
Confidence 9976543211 11235789999999985 47899999999999874
No 374
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.93 E-value=4.4e-26 Score=252.89 Aligned_cols=188 Identities=24% Similarity=0.341 Sum_probs=154.6
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC-CCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDF-EGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~ 780 (914)
..+|...+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++..... ....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 368999999999999999999998899999999986432 2234568899999999999999999998754321 1223
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||++ .++.++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 94 ~~~lv~e~~~-~~l~~~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~df 161 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG--------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDF 161 (342)
T ss_pred eEEEEecccc-cCHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeC
Confidence 5689999996 47776652 3578889999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+++..... .....||+.|+|||++. +.++|+||+||+++||+
T Consensus 162 g~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~ 209 (342)
T cd07879 162 GLARHADAE-----------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEML 209 (342)
T ss_pred CCCcCCCCC-----------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHH
Confidence 998754211 11346889999999874 36899999999999874
No 375
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.93 E-value=6.6e-26 Score=239.89 Aligned_cols=187 Identities=30% Similarity=0.420 Sum_probs=161.8
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALV 785 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 785 (914)
+|+..+.||+|++|.||+|++..+++.||+|++........+.+.+|++++++++||+++++++++... ...+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKK-----DELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----CeEEEE
Confidence 477889999999999999999888999999999765554667899999999999999999999985433 478999
Q ss_pred EecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 786 FEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 786 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
+||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+..
T Consensus 76 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 147 (253)
T cd05122 76 MEFCSGGSLKDLLKSTN-----QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQ 147 (253)
T ss_pred EecCCCCcHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccc
Confidence 99999999999987643 4689999999999999999999998 999999999999999999999999999976
Q ss_pred ccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 866 LSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
...... .....|+..|+|||++. +.++|+|||||++++|+
T Consensus 148 ~~~~~~---------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~ 191 (253)
T cd05122 148 LSDTKA---------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELA 191 (253)
T ss_pred cccccc---------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHH
Confidence 543211 12356899999999985 47899999999999874
No 376
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.93 E-value=2.8e-26 Score=248.32 Aligned_cols=192 Identities=22% Similarity=0.273 Sum_probs=151.9
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|+..+.||+|+||.||++++..+++.||+|.+.... ......+.+|+.++.++. ||||+++++++.. ....
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-----~~~~ 78 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-----EGDC 78 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEec-----CCcE
Confidence 35666789999999999999999999999999986443 234567889999999996 9999999998543 3467
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
+++|||++ +++.++...... .....+++..+.+++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~~~~e~~~-~~l~~l~~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~ 154 (288)
T cd06616 79 WICMELMD-ISLDKFYKYVYE-VLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGI 154 (288)
T ss_pred EEEEeccc-CCHHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecch
Confidence 89999985 466554321100 01146889999999999999999999742 899999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-------hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~f 914 (914)
++.+.... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 155 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~ 204 (288)
T cd06616 155 SGQLVDSI---------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVA 204 (288)
T ss_pred hHHhccCC---------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHH
Confidence 97654321 111235899999999874 35799999999999874
No 377
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.93 E-value=7e-26 Score=240.18 Aligned_cols=187 Identities=30% Similarity=0.479 Sum_probs=160.7
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|+..+.||+|++|.||+|++..+++.||+|.+..... ...+.+.+|++++++++|||++++++++.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET-----SDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe-----CCEEE
Confidence 47788999999999999999998899999999975543 345688999999999999999999998643 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++... ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~------~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 76 IILEYAENGSLRQIIKKF------GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred EEEecCCCCcHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccc
Confidence 999999999999998754 3688999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........ .....|+..|+|||... +.++|+|++|+++++|+
T Consensus 147 ~~~~~~~~~--------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~ 193 (254)
T cd06627 147 TKLNDVSKD--------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELL 193 (254)
T ss_pred eecCCCccc--------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHH
Confidence 876432211 12346899999999874 47899999999998874
No 378
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.93 E-value=4.2e-26 Score=252.56 Aligned_cols=195 Identities=20% Similarity=0.339 Sum_probs=155.0
Q ss_pred hccc-ccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcc--------------hHHHHHHHHHHHhcCCCCcceEEe
Q 042766 705 SEFS-SSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--------------SKSFVSECEALRNIRHRNLIKIIT 769 (914)
Q Consensus 705 ~~~~-~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~~ 769 (914)
++|. +.+.||+|+||+||+|++..+++.||||+++...... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 3554 4577999999999999999899999999986432211 125789999999999999999999
Q ss_pred EeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee
Q 042766 770 ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 849 (914)
Q Consensus 770 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl 849 (914)
++.. .+..++||||++ |+|.+++... ..+++.....++.|++.|++|||+. +|+||||||+||++
T Consensus 88 ~~~~-----~~~~~lv~e~~~-~~l~~~l~~~------~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill 152 (335)
T PTZ00024 88 VYVE-----GDFINLVMDIMA-SDLKKVVDRK------IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFI 152 (335)
T ss_pred EEec-----CCcEEEEEeccc-cCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEE
Confidence 8643 347899999996 6999998654 3588899999999999999999998 99999999999999
Q ss_pred cCCCcEEEeccccccccccccccc------ccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 850 DYDMVAHVGDFGLAKFLSNHHLDI------ASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 850 ~~~~~~ki~DFGla~~~~~~~~~~------~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+.++.+|++|||+++......... ............+++.|+|||++. +.++|+||+||++++|+
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~ 228 (335)
T PTZ00024 153 NSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELL 228 (335)
T ss_pred CCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHH
Confidence 999999999999998664211100 000011112345788999999884 46799999999999874
No 379
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.93 E-value=5.5e-26 Score=257.31 Aligned_cols=202 Identities=18% Similarity=0.240 Sum_probs=148.7
Q ss_pred HhhcccccCcccCCccEEEEEEEEC----------------CCcEEEEEEEeeccCCcchH--------------HHHHH
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILG----------------DDEMVVAVKVINLKQKGASK--------------SFVSE 752 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~----------------~~~~~vavK~~~~~~~~~~~--------------~~~~E 752 (914)
..++|++.++||+|+||+||+|.+. ..++.||||++........+ ....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 4568999999999999999999752 23467999998654332222 33457
Q ss_pred HHHHHhcCCCCc-----ceEEeEeecCCC---CCCceEeEEEecccCCCHHHHHhccCCc------------------cc
Q 042766 753 CEALRNIRHRNL-----IKIITICSSTDF---EGVDFKALVFEYMENGSLEDWLHQSNDQ------------------VE 806 (914)
Q Consensus 753 ~~~l~~l~h~ni-----v~l~~~~~~~~~---~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------~~ 806 (914)
+.++.+++|.++ ++++++|..... ...+..++||||+++++|.++++..... ..
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777788876654 677777654211 1234579999999999999998753210 01
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccC
Q 042766 807 VRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKG 886 (914)
Q Consensus 807 ~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~G 886 (914)
....++..+..++.|++.|+.|+|+. +|+||||||+||+++.++.+||+|||+++....... .......+
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-------~~~~~g~~ 372 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-------FNPLYGML 372 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-------cCccccCC
Confidence 12356778889999999999999998 999999999999999999999999999975432110 01112345
Q ss_pred cccccccchhhh--------------------------hhcccCcccccccccC
Q 042766 887 TVGYVAPGKFFM--------------------------LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 887 T~~y~APE~~~~--------------------------~~~Di~s~g~~~~~~f 914 (914)
|+.|+|||++.. .+.|+||+||++++|+
T Consensus 373 tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~ 426 (507)
T PLN03224 373 DPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMC 426 (507)
T ss_pred CcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHH
Confidence 899999998732 2369999999999984
No 380
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.93 E-value=3.1e-26 Score=246.80 Aligned_cols=196 Identities=27% Similarity=0.402 Sum_probs=162.3
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCc
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~ 780 (914)
++|...+.||+|+||.||+|+...+++.||+|++... .....+.+.+|++++++++ ||||+++++++ ...+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTF-----QDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHh-----cCCc
Confidence 3688899999999999999999989999999998643 2233467889999999998 99999999874 4455
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++++|.+++... ..+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++++||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df 146 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKY------GSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDF 146 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCC
Confidence 789999999999999999764 3689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccc------------CCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIAS------------KTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~------------~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|++............ ..........|+..|+|||++. +.++|+||+||++++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~ 216 (280)
T cd05581 147 GTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQML 216 (280)
T ss_pred ccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHH
Confidence 999876543211000 0012233457899999999884 47899999999988763
No 381
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.93 E-value=7.6e-26 Score=247.23 Aligned_cols=184 Identities=27% Similarity=0.369 Sum_probs=154.1
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
..|+..+.||+|+||.||+|++..+++.||+|.+.... ....+++.+|+++++.++|+|++++++++... ..
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 89 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE-----HT 89 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC-----Ce
Confidence 34777789999999999999999899999999986432 22345678999999999999999999986543 47
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+. |++.+++.... ..+++.++..++.|++.|+.|||+. +++||||||+||+++.++.+|++|||
T Consensus 90 ~~lv~e~~~-~~l~~~~~~~~-----~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 160 (308)
T cd06634 90 AWLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 160 (308)
T ss_pred eEEEEEccC-CCHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcc
Confidence 899999996 68888775432 3578899999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-------hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~f 914 (914)
++...... ....||+.|+|||++. +.++|+||+||++++|+
T Consensus 161 ~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~ 208 (308)
T cd06634 161 SASIMAPA------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208 (308)
T ss_pred cceeecCc------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHH
Confidence 98754321 1246889999999974 35799999999999874
No 382
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.93 E-value=5.3e-26 Score=249.49 Aligned_cols=185 Identities=22% Similarity=0.181 Sum_probs=146.6
Q ss_pred ccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecccCCCH
Q 042766 717 RFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSL 794 (914)
Q Consensus 717 ~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL 794 (914)
++|.||.++...+++.||||++... .....+.+.+|++++++++||||+++++++. ..+..+++|||+++|++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~-----~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFI-----VDSELYVVSPLMAYGSC 86 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheee-----cCCeEEEEEeccCCCCH
Confidence 3455566666668999999999754 3344568999999999999999999999854 34578999999999999
Q ss_pred HHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccccccccccc
Q 042766 795 EDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIA 874 (914)
Q Consensus 795 ~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~ 874 (914)
.+++..... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.+..........
T Consensus 87 ~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~- 158 (314)
T cd08216 87 EDLLKTHFP----EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ- 158 (314)
T ss_pred HHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccc-
Confidence 999976432 3578889999999999999999999 99999999999999999999999999887654322110
Q ss_pred cCCCCccccccCcccccccchhh------hhhcccCcccccccccC
Q 042766 875 SKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 875 ~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~~~~~~f 914 (914)
...........++..|+|||++. +.++|+||+||+++||+
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~ 204 (314)
T cd08216 159 RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELA 204 (314)
T ss_pred cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHH
Confidence 00111123456888999999973 46899999999999874
No 383
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.93 E-value=1.1e-25 Score=246.43 Aligned_cols=182 Identities=28% Similarity=0.364 Sum_probs=152.7
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC---cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
|...+.||+|+||+||+|++..+++.||+|++..... ...+.+.+|++++++++|||++++++++... ...+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE-----HTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC-----CEEE
Confidence 6667789999999999999998999999999864332 2335678899999999999999999996543 4789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+. |++.+++.... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 98 lv~e~~~-~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~ 168 (313)
T cd06633 98 LVMEYCL-GSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSA 168 (313)
T ss_pred EEEecCC-CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCC
Confidence 9999995 58888776543 4688999999999999999999999 9999999999999999999999999988
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh-------hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~f 914 (914)
..... .....|+..|+|||++. +.++|+||+||++++|+
T Consensus 169 ~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~ 214 (313)
T cd06633 169 SKSSP------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 214 (313)
T ss_pred cccCC------------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHH
Confidence 64211 11346899999999973 46789999999999874
No 384
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.93 E-value=8e-26 Score=240.84 Aligned_cols=178 Identities=23% Similarity=0.318 Sum_probs=146.7
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccCC---cchHHHHHHHHHH-HhcCCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK---GASKSFVSECEAL-RNIRHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||.||+|++..+++.||+|+++.... .....+..|..++ ...+|+|++++++++.. .+..++||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS-----KDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc-----CCeEEEEE
Confidence 568999999999999998999999999864321 1223344555544 45589999999998543 34789999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++++|.+++... ..+++.++..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 77 e~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 77 EYLNGGDCASLIKTL------GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred eccCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 999999999999754 3578889999999999999999998 9999999999999999999999999998754
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.. .....|++.|+|||.+. +.++|+||+|+++|+|+
T Consensus 148 ~~------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~ 187 (260)
T cd05611 148 LE------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFL 187 (260)
T ss_pred cc------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHH
Confidence 32 11246889999999985 46799999999999874
No 385
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.93 E-value=9.8e-26 Score=239.53 Aligned_cols=191 Identities=25% Similarity=0.418 Sum_probs=161.7
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|+..+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|++++++++|||++++++.+.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~-----~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE-----KGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec-----CCEEE
Confidence 47888999999999999999998899999999975433 455678899999999999999999988543 35789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++..... ....+++.++..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 76 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~ 150 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKK--EGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGIS 150 (258)
T ss_pred EEEEecCCCcHHHHHHHhhc--cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccce
Confidence 99999999999999976421 125789999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
....... .......|++.|+|||... +.++|+||+|+++++|+
T Consensus 151 ~~~~~~~--------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~ 197 (258)
T cd08215 151 KVLSSTV--------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELC 197 (258)
T ss_pred eecccCc--------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHH
Confidence 8654321 0112346899999999874 47899999999998874
No 386
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.93 E-value=7.5e-26 Score=244.98 Aligned_cols=188 Identities=21% Similarity=0.270 Sum_probs=155.0
Q ss_pred cccccCcccCCccEEEEEEEEC---CCcEEEEEEEeeccC----CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCC
Q 042766 706 EFSSSNMIGQGRFGTVYKGILG---DDEMVVAVKVINLKQ----KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFE 777 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 777 (914)
+|++.+.||+|+||.||+|++. .+++.||||+++... ....+.+.+|+++++++ +||+|+++++.+ +
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAF-----Q 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheee-----e
Confidence 4778899999999999999864 356889999986432 23345788999999999 599999998874 3
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEE
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHV 857 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki 857 (914)
.....++||||+++|+|.+++... ..+++..+..++.|+++|++|||+. +++||||||+||+++.++.+++
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l 146 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQR------EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVL 146 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhhc------CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEE
Confidence 445789999999999999998753 3578889999999999999999998 9999999999999999999999
Q ss_pred ecccccccccccccccccCCCCccccccCcccccccchhh------hhhcccCcccccccccC
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~~~~~~f 914 (914)
+|||+++....... .......|+..|+|||.+. +.++|+||+||++++|+
T Consensus 147 ~dfg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~ 202 (288)
T cd05583 147 TDFGLSKEFLAEEE-------ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELL 202 (288)
T ss_pred EECccccccccccc-------cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHH
Confidence 99999876543211 1112356899999999984 36899999999999874
No 387
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.4e-26 Score=231.44 Aligned_cols=189 Identities=21% Similarity=0.280 Sum_probs=161.3
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 778 (914)
..++|...++||+|+|++|..++++.+.+.||+|+++++ +..+..-...|-.+..+. +||.+|.++.+ |+.
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhsc-----fqt 322 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSC-----FQT 322 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhh-----hcc
Confidence 346799999999999999999999999999999999754 333444556677777665 79999999877 677
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
....++|.||++||+|.-.+.+. +.++++.+..+..+|+-||.|||++ |||.||+|.+|+|+|..|++|++
T Consensus 323 esrlffvieyv~ggdlmfhmqrq------rklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghiklt 393 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQ------RKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLT 393 (593)
T ss_pred cceEEEEEEEecCcceeeehhhh------hcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeec
Confidence 77999999999999998877765 4789999999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
|+|+++.-- .+......++|||.|+|||+++ |..+|.|++|+..+||
T Consensus 394 dygmcke~l--------~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfem 444 (593)
T KOG0695|consen 394 DYGMCKEGL--------GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEM 444 (593)
T ss_pred ccchhhcCC--------CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHH
Confidence 999997421 1222344689999999999995 6889999999998887
No 388
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.93 E-value=9.6e-26 Score=241.53 Aligned_cols=190 Identities=25% Similarity=0.416 Sum_probs=155.0
Q ss_pred cccccCcccCCccEEEEEEEECC-CcEEEEEEEeeccC----------CcchHHHHHHHHHHHh-cCCCCcceEEeEeec
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGD-DEMVVAVKVINLKQ----------KGASKSFVSECEALRN-IRHRNLIKIITICSS 773 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 773 (914)
+|++.+.||+|+||.||+|++.. +++.+|+|.+.... .....++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999987 67899999886322 1223457788888865 799999999998543
Q ss_pred CCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCcEecCCCCCCeeecCC
Q 042766 774 TDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH-HCQPPMVHGDLKPSNVLLDYD 852 (914)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~-~~~~~ivHrDlkp~NILl~~~ 852 (914)
.+..++||||+++++|.+++..... ....+++..+++++.|++.|+.|||+ . +++||||||+||+++.+
T Consensus 81 -----~~~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~ 150 (269)
T cd08528 81 -----NDRLYIVMDLIEGAPLGEHFNSLKE--KKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGED 150 (269)
T ss_pred -----CCeEEEEEecCCCCcHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCC
Confidence 4578999999999999998854211 12468889999999999999999996 5 89999999999999999
Q ss_pred CcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 853 MVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 853 ~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+.+||+|||.+....... ......|+..|+|||++. +.++|+||+||++++|+
T Consensus 151 ~~~~l~dfg~~~~~~~~~---------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~ 207 (269)
T cd08528 151 DKVTITDFGLAKQKQPES---------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMC 207 (269)
T ss_pred CcEEEecccceeeccccc---------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHH
Confidence 999999999998654321 112356899999999985 47899999999999874
No 389
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.93 E-value=7.5e-26 Score=249.25 Aligned_cols=188 Identities=26% Similarity=0.315 Sum_probs=156.8
Q ss_pred HHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 701 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
....++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|++++++++||||+++++++...
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~---- 81 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP---- 81 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC----
Confidence 34567899999999999999999999999999999988532 223456788999999999999999999986432
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
....++||||+ +++|.++++.. .+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+
T Consensus 82 ~~~~~lv~e~~-~~~L~~~~~~~-------~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~ 150 (328)
T cd07856 82 LEDIYFVTELL-GTDLHRLLTSR-------PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKIC 150 (328)
T ss_pred CCcEEEEeehh-ccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeC
Confidence 24678999999 56999888642 467778888999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|||.++..... .....+++.|+|||++. +.++|+||+||++++|+
T Consensus 151 dfg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~ 200 (328)
T cd07856 151 DFGLARIQDPQ-----------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEML 200 (328)
T ss_pred ccccccccCCC-----------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHH
Confidence 99998753211 11246788999999863 47899999999999874
No 390
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.93 E-value=1.6e-25 Score=237.98 Aligned_cols=191 Identities=26% Similarity=0.417 Sum_probs=162.1
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|+..+.||+|++|.||+|++..+++.|++|++..... ...+.+.+|++++++++||||+++++.+.... ....+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCeEE
Confidence 47778899999999999999998999999999875542 44678899999999999999999999865431 24789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++... ..+++.+++.++.|++.|++|||+. +++|+|++|+||+++.++.+||+|||.+
T Consensus 78 lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKF------GKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred EEEEecCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccE
Confidence 999999999999999764 2689999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
......... .......++..|+|||.+. ..++|+||+||++++|+
T Consensus 149 ~~~~~~~~~------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~ 197 (260)
T cd06606 149 KRLGDIETG------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMA 197 (260)
T ss_pred Eeccccccc------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHH
Confidence 876543210 0122356899999999984 57899999999999874
No 391
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.93 E-value=1.1e-25 Score=238.91 Aligned_cols=189 Identities=24% Similarity=0.374 Sum_probs=159.4
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+|++.+.||+|+||.||+|++..+++.+|+|.+.... ......+.+|++++++++|+||+++++++. .....+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFL-----DGNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhc-----cCCEEE
Confidence 4788899999999999999999899999999987543 233457789999999999999999998853 335789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++.+... ....+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||++
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~ 150 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKK--KRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGIS 150 (256)
T ss_pred EEehhcCCCCHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccch
Confidence 99999999999999876321 124688999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+...... .....|++.|+|||.+. +.++|+||+|+++++|+
T Consensus 151 ~~~~~~~----------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~ 195 (256)
T cd08530 151 KVLKKNM----------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMA 195 (256)
T ss_pred hhhccCC----------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHH
Confidence 8764321 11235889999999985 46899999999998874
No 392
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.92 E-value=1.5e-25 Score=241.98 Aligned_cols=186 Identities=25% Similarity=0.385 Sum_probs=154.9
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCceEeE
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
|++.+.||+|++|+||+|+...+++.||||++..... .......+|+..+++++ ||||+++++++.. .+..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~-----~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE-----NDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc-----CCcEEE
Confidence 5677899999999999999998899999999864432 22234567999999999 9999999998543 457899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+ +|++.+++.... ...+++.+++.++.|++.|+.|||++ +++|+||||+||+++.++.++|+|||.++
T Consensus 76 v~e~~-~~~l~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRK----GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred EEecC-CCCHHHHHHhcc----cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccce
Confidence 99999 789999887643 14679999999999999999999999 99999999999999999999999999997
Q ss_pred cccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
...... ......|+..|+|||++. +.++|+|||||++++|+
T Consensus 148 ~~~~~~---------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~ 193 (283)
T cd07830 148 EIRSRP---------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELY 193 (283)
T ss_pred eccCCC---------CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHH
Confidence 653221 111246889999999873 47899999999998874
No 393
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.92 E-value=1.7e-25 Score=241.34 Aligned_cols=186 Identities=27% Similarity=0.429 Sum_probs=156.3
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
|+..+.||+|+||.||+|+...+++.||+|++.... ....+.+.+|++++++++|+|++++++++.. .+..++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHT-----ERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhc-----CCceEE
Confidence 556788999999999999999899999999997553 3345678899999999999999999998543 357899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||++ ++|.+++.... ..+++..+..++.|++.|++|||++ +|+||||+|+||+++.++.+||+|||.++
T Consensus 76 v~e~~~-~~l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~ 146 (282)
T cd07829 76 VFEYCD-MDLKKYLDKRP-----GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLAR 146 (282)
T ss_pred EecCcC-cCHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCccc
Confidence 999997 59999998643 3688999999999999999999999 99999999999999999999999999998
Q ss_pred cccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
....... ......++..|+|||.+. +.++|+||+||+++|++
T Consensus 147 ~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~ 193 (282)
T cd07829 147 AFGIPLR--------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMI 193 (282)
T ss_pred ccCCCcc--------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHH
Confidence 6543211 111234678899999974 35899999999999863
No 394
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.92 E-value=2.1e-25 Score=242.52 Aligned_cols=189 Identities=21% Similarity=0.295 Sum_probs=153.1
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|++.+.||+|+||.||+|++..+++.||||+++... ......+.+|++++.+.. ||||+++++++.. ...
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~~~ 88 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT-----DSD 88 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeec-----CCe
Confidence 357888999999999999999999889999999997543 233456677887776664 9999999999644 347
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||++ +++.+++.... ..+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||
T Consensus 89 ~~~v~e~~~-~~l~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg 160 (296)
T cd06618 89 VFICMELMS-TCLDKLLKRIQ-----GPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFG 160 (296)
T ss_pred EEEEeeccC-cCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccc
Confidence 899999985 57887776532 36888999999999999999999731 89999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhhh--------hhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM--------LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~--------~~~Di~s~g~~~~~~f 914 (914)
++..+..... .....|++.|+|||++.+ .++|+|||||++++|+
T Consensus 161 ~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~ 212 (296)
T cd06618 161 ISGRLVDSKA---------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELA 212 (296)
T ss_pred cchhccCCCc---------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHH
Confidence 9876532211 112358889999999853 4799999999999874
No 395
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=4.6e-27 Score=247.14 Aligned_cols=188 Identities=22% Similarity=0.287 Sum_probs=162.5
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
..++++....||-|+||.|-.++.......+|+|++++. +....+....|-.+|.+++.|.||++|.- |.+.
T Consensus 418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrT-----frd~ 492 (732)
T KOG0614|consen 418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRT-----FRDS 492 (732)
T ss_pred chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHH-----hccc
Confidence 345666778899999999999998766666899988644 34455678889999999999999999976 5666
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
.+.|+.||-|-||.+...++.++ .++...+..++..+.+|.+|||++ +||.|||||+|.++|.+|-+|+.|
T Consensus 493 kyvYmLmEaClGGElWTiLrdRg------~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVD 563 (732)
T KOG0614|consen 493 KYVYMLMEACLGGELWTILRDRG------SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVD 563 (732)
T ss_pred hhhhhhHHhhcCchhhhhhhhcC------CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEee
Confidence 78999999999999999998764 577788889999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
||+|+.+... ..+..+||||.|.|||++. +.++|.|++|+.+||+
T Consensus 564 FGFAKki~~g---------~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~EL 612 (732)
T KOG0614|consen 564 FGFAKKIGSG---------RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYEL 612 (732)
T ss_pred hhhHHHhccC---------CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHH
Confidence 9999987543 2345689999999999996 4899999999999885
No 396
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.92 E-value=2.2e-25 Score=240.65 Aligned_cols=186 Identities=27% Similarity=0.406 Sum_probs=156.1
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
|+..+.||+|++|.||+|++..+++.+|+|.++.... .....+.+|++++++++|++|+++++++.. ....++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRH-----KGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhcc-----CCCEEE
Confidence 5667899999999999999988999999999864432 345678899999999999999999998543 357899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
||||+++ ++.+++.... ..+++.+++.++.|++.|++|||+. +|+|+||||+||+++.++.+||+|||.+.
T Consensus 76 v~e~~~~-~l~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~ 146 (283)
T cd05118 76 VFEFMDT-DLYKLIKDRQ-----RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLAR 146 (283)
T ss_pred EEeccCC-CHHHHHHhhc-----ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeE
Confidence 9999975 8888887542 4688999999999999999999999 99999999999999999999999999997
Q ss_pred cccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
....... ......++..|+|||.+. +.++|+||+||++++|+
T Consensus 147 ~~~~~~~--------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~ 193 (283)
T cd05118 147 SFGSPVR--------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELL 193 (283)
T ss_pred ecCCCcc--------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHH
Confidence 6643220 111245888999999974 46899999999999874
No 397
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=2e-24 Score=272.53 Aligned_cols=345 Identities=22% Similarity=0.284 Sum_probs=237.2
Q ss_pred CCCCCCCCCCEEEcCCCC------CcccCCcccCCCC-CCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCCh
Q 042766 95 PYVGNLSFLRYINLADNG------FRGDIPQEIGNLF-RLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPK 167 (914)
Q Consensus 95 ~~l~~l~~L~~L~L~~n~------l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 167 (914)
.++..+++|+.|.+..+. +...+|..+..++ +|+.|++.+|.+. .+|..+ ...+|+.|++++|++. .+|.
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~ 628 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWD 628 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccc
Confidence 447788999999886653 3446777777765 5899999988887 788777 5788999999999887 6777
Q ss_pred hccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCcccccccc
Q 042766 168 EIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSV 247 (914)
Q Consensus 168 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 247 (914)
.+..+++|++|+|++|...+.+|+ +..+++|+.|+|++|.....+|..++++++|+.|++++|.....+|..+ ++++|
T Consensus 629 ~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL 706 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSL 706 (1153)
T ss_pred ccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCC
Confidence 888888899999988765556774 7788888888888887666888888888888888888875545666655 67888
Q ss_pred ceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccC
Q 042766 248 ELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQ 327 (914)
Q Consensus 248 ~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 327 (914)
+.|++++|...+.+|. ..++|++|+|++|.+. .+|..+ .+++|+.|++.++...... ..+..+
T Consensus 707 ~~L~Lsgc~~L~~~p~----~~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~-~~~~~l---------- 769 (1153)
T PLN03210 707 YRLNLSGCSRLKSFPD----ISTNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLW-ERVQPL---------- 769 (1153)
T ss_pred CEEeCCCCCCcccccc----ccCCcCeeecCCCccc-cccccc-cccccccccccccchhhcc-cccccc----------
Confidence 8888888765555552 2457777777777776 455544 4667777776654322110 000000
Q ss_pred CcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccC
Q 042766 328 NNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVN 407 (914)
Q Consensus 328 N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 407 (914)
.+......++|+.|+|++|...+.+|.++..+. +|+.|++++|...+.+|..+ ++++|+.|+|++|
T Consensus 770 ------------~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~-~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c 835 (1153)
T PLN03210 770 ------------TPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLH-KLEHLEIENCINLETLPTGI-NLESLESLDLSGC 835 (1153)
T ss_pred ------------chhhhhccccchheeCCCCCCccccChhhhCCC-CCCEEECCCCCCcCeeCCCC-CccccCEEECCCC
Confidence 000112235666666666666556666666655 56677776665444566555 5777777887776
Q ss_pred cccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeC-CcCCCCCCCccCCCCCccccccCCCc
Q 042766 408 QFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGS-NSLQGNIPSSLGNCQNLILFIASYNK 480 (914)
Q Consensus 408 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~l~~N~ 480 (914)
.....+|.. .++|+.|+|++|.++ .+|.++..+++|+.|+|++ |++. .+|..+..+++|+.++++++.
T Consensus 836 ~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 836 SRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred Ccccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 544455543 356778888888877 5677777788888888877 4454 466677777788887777664
No 398
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.92 E-value=3.6e-25 Score=234.25 Aligned_cols=180 Identities=29% Similarity=0.354 Sum_probs=153.2
Q ss_pred ccCCccEEEEEEEECCCcEEEEEEEeeccCC---cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecc
Q 042766 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYM 789 (914)
Q Consensus 713 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 789 (914)
||+|+||.||+|++..+++.||+|+++.... .....+..|++++++++||||+++++.+ +.....++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAF-----QTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHe-----ecCCeeEEEEecC
Confidence 6999999999999988899999999874432 2445788999999999999999999874 4456889999999
Q ss_pred cCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccc
Q 042766 790 ENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNH 869 (914)
Q Consensus 790 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~ 869 (914)
++++|.+++... ..+++..+..++.|++.|+.|+|+. +++|+||||+||+++.++.++|+|||++......
T Consensus 76 ~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 76 PGGELFSHLSKE------GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred CCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 999999999764 3578999999999999999999998 9999999999999999999999999999765432
Q ss_pred ccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 870 HLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 870 ~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
. .......|+..|+|||... +.++|+||+||++++++
T Consensus 147 ~--------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~ 187 (250)
T cd05123 147 G--------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEML 187 (250)
T ss_pred C--------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHH
Confidence 1 1122356899999999985 47899999999998864
No 399
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.92 E-value=1.8e-25 Score=234.43 Aligned_cols=169 Identities=17% Similarity=0.095 Sum_probs=140.9
Q ss_pred CccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecccCCCHH
Q 042766 716 GRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLE 795 (914)
Q Consensus 716 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 795 (914)
|.||.||+|++..+++.||+|+++... .+.+|...+....||||+++++++. ..+..++||||+++|+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIV-----SEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhhee-----cCCeEEEEEecCCCCCHH
Confidence 899999999999999999999986432 2334555556667999999999854 345789999999999999
Q ss_pred HHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccccccccc
Q 042766 796 DWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIAS 875 (914)
Q Consensus 796 ~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~ 875 (914)
+++.+. ..+++..+..++.|++.|++|+|+. +|+||||||+||+++.++.++++|||.+......
T Consensus 74 ~~l~~~------~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~------ 138 (237)
T cd05576 74 SHISKF------LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS------ 138 (237)
T ss_pred HHHHHh------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc------
Confidence 998754 3588999999999999999999998 9999999999999999999999999988654321
Q ss_pred CCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 876 KTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 876 ~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.....++..|||||+.. +.++|+||+||++|||+
T Consensus 139 -----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~ 176 (237)
T cd05576 139 -----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELL 176 (237)
T ss_pred -----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHH
Confidence 11234677899999873 47899999999999873
No 400
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.92 E-value=1.3e-25 Score=249.35 Aligned_cols=190 Identities=23% Similarity=0.337 Sum_probs=157.7
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC-CCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTDF-EGV 779 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~ 779 (914)
..++|++.+.||+|+||.||+|++..+++.||||++... .....+.+.+|+.++++++||||+++++++...+. ...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 356899999999999999999999989999999998643 22334567889999999999999999887543321 222
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++|+||+ +++|.+++.. ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~-------~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~d 161 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC-------QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILD 161 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcc
Confidence 3479999999 6799998864 3588999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
||++...... .....+|..|+|||... +.++|+||+||++++|+
T Consensus 162 fg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell 210 (343)
T cd07851 162 FGLARHTDDE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 210 (343)
T ss_pred cccccccccc-----------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHH
Confidence 9999764321 11346889999999874 47899999999999874
No 401
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.92 E-value=3.3e-26 Score=217.87 Aligned_cols=184 Identities=21% Similarity=0.384 Sum_probs=153.7
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCce
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 781 (914)
..++|++.+++|+|.|++||.|....+.+.++||++++- ..+.+.+|+.+++.+. ||||++++++..++. ...
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~---Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPE---SKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCcc---ccC
Confidence 346899999999999999999999888899999999643 3367889999999997 999999999876544 234
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC-CcEEEecc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDF 860 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~-~~~ki~DF 860 (914)
..+|+||+.+.+...... .++......++.++++||.|+|+. ||+|||+||.|++||.. ...+++|+
T Consensus 110 paLiFE~v~n~Dfk~ly~---------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDW 177 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYP---------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDW 177 (338)
T ss_pred chhHhhhhccccHHHHhh---------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeec
Confidence 679999999888777653 466678888999999999999999 99999999999999965 57999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchh-----hhhhcccCccccccccc
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF-----FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~-----~~~~~Di~s~g~~~~~~ 913 (914)
|+|.++.... .-...+.+.+|.-||.+ +++.-|+|||||.++.|
T Consensus 178 GLAEFYHp~~---------eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~m 226 (338)
T KOG0668|consen 178 GLAEFYHPGK---------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 226 (338)
T ss_pred chHhhcCCCc---------eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHH
Confidence 9999875422 11124567889999998 46889999999998876
No 402
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.92 E-value=1.2e-24 Score=260.07 Aligned_cols=185 Identities=28% Similarity=0.405 Sum_probs=154.9
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|.+.+.||+|+||.||+|++..+++.||||+++... ......+.+|+.+++.++||||+++++++.. ..
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-----~~ 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS-----AN 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE-----CC
Confidence 357999999999999999999999999999999996433 2234678899999999999999999987543 34
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++++|.+++... ..+++..++.|+.||+.||+|||++ +||||||||+|||++.++.+||+||
T Consensus 78 ~~~lVmEy~~g~~L~~li~~~------~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DF 148 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHIY------GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDF 148 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeC
Confidence 789999999999999999754 3578888999999999999999998 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccc
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTN 910 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~ 910 (914)
|+++....... ......||+.|+|||..+ ....++|++|+..
T Consensus 149 Gls~~~~~~~~--------~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~~~ 195 (669)
T cd05610 149 GLSKVTLNREL--------NMMDILTTPSMAKPKNDYSRTPGQVLSLISSLGFNT 195 (669)
T ss_pred CCCccccCCcc--------cccccccCccccCccccccCCCCceeeeeeecCcCC
Confidence 99986543221 122457999999999874 2567777777643
No 403
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=1.6e-24 Score=235.07 Aligned_cols=171 Identities=20% Similarity=0.192 Sum_probs=130.7
Q ss_pred HHHhhcccccCcccCCccEEEEEEEECC-CcEEEEEEEeecc-----CCcchHHHHHHHHHHHhcCCCCcce-EEeEeec
Q 042766 701 SKATSEFSSSNMIGQGRFGTVYKGILGD-DEMVVAVKVINLK-----QKGASKSFVSECEALRNIRHRNLIK-IITICSS 773 (914)
Q Consensus 701 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~ 773 (914)
.....+|...+.||+|+||+||+|+++. +++.||||++... .....+.+.+|++++++++|+|++. ++++
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 3445689999999999999999999875 6788899987532 1223457899999999999999985 4331
Q ss_pred CCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCC-CCCCeeecCC
Q 042766 774 TDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDL-KPSNVLLDYD 852 (914)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDl-kp~NILl~~~ 852 (914)
+..++||||++|++|... ... . ...++.|+++||+|||+. +|+|||| ||+|||++.+
T Consensus 91 ------~~~~LVmE~~~G~~L~~~-~~~---------~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~ 148 (365)
T PRK09188 91 ------GKDGLVRGWTEGVPLHLA-RPH---------G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPD 148 (365)
T ss_pred ------CCcEEEEEccCCCCHHHh-Ccc---------c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCC
Confidence 246899999999999732 110 0 135788999999999999 9999999 9999999999
Q ss_pred CcEEEecccccccccccccccccCCCCccccccCcccccccchh
Q 042766 853 MVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF 896 (914)
Q Consensus 853 ~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~ 896 (914)
+.+||+|||+|+.+..............-....|++.|+|||.+
T Consensus 149 ~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~ 192 (365)
T PRK09188 149 GEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDAL 192 (365)
T ss_pred CCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccC
Confidence 99999999999977543211111111112357899999999998
No 404
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.91 E-value=5e-25 Score=234.67 Aligned_cols=190 Identities=23% Similarity=0.312 Sum_probs=152.2
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeecc-----CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK-----QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
+|.+.+.||+|+||.||+|++..++..+++|+++.. ......++.+|+.++++++||||+++++++. ...
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFL-----ERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHh-----cCC
Confidence 478889999999999999999877666767766421 1223446778999999999999999998853 334
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++++|.+++..... ....+++.+++.++.|++.|+.|||+. +++|+|+||+||+++. +.+|++||
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~ 149 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKH--TGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDF 149 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhh--cccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeeccc
Confidence 68999999999999998865321 124689999999999999999999998 9999999999999975 56999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|.++....... ......|++.|+|||.+. +.++|+||+|+++++|+
T Consensus 150 g~~~~~~~~~~--------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~ 199 (260)
T cd08222 150 GVSRLLMGSCD--------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMC 199 (260)
T ss_pred CceeecCCCcc--------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 99976543211 112345889999999884 35799999999998764
No 405
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=5.5e-24 Score=268.65 Aligned_cols=344 Identities=21% Similarity=0.240 Sum_probs=237.0
Q ss_pred cccCCCCCCCeeecCCCC------CCCcCCCCccccC-CcchhccCCCcccCCCChhccccccccccccccccccCcCCc
Q 042766 119 QEIGNLFRLEKLALSNNS------FSGTIPTNLSRCS-NLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPD 191 (914)
Q Consensus 119 ~~~~~l~~L~~L~Ls~N~------l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 191 (914)
.+|.++++|+.|.+..+. +...+|..+..++ +|+.|++.+|.++ .+|..| ...+|++|+|++|++. .+|.
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~ 628 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWD 628 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccc
Confidence 456778888888886553 3334666666654 5777777777776 667666 4577777888777776 5666
Q ss_pred ccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcc
Q 042766 192 SVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPN 271 (914)
Q Consensus 192 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~ 271 (914)
.+..+++|+.|+|++|...+.+|. ++.+++|++|+|++|.....+|..+.++++|+.|++++|...+.+|... ++++
T Consensus 629 ~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i--~l~s 705 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI--NLKS 705 (1153)
T ss_pred ccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC--CCCC
Confidence 777777777777777654446664 6677777777777776555677777777777777777765444555443 5667
Q ss_pred cceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCc
Q 042766 272 LKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLK 351 (914)
Q Consensus 272 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~ 351 (914)
|+.|+|++|...+.+|.. .++|++|+|++|.++.. |..+ .+++|++|++.++......
T Consensus 706 L~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~l-P~~~-~l~~L~~L~l~~~~~~~l~----------------- 763 (1153)
T PLN03210 706 LYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEEF-PSNL-RLENLDELILCEMKSEKLW----------------- 763 (1153)
T ss_pred CCEEeCCCCCCccccccc---cCCcCeeecCCCccccc-cccc-cccccccccccccchhhcc-----------------
Confidence 777777776544444432 34566666666666532 2222 3455555555443221110
Q ss_pred EEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeeccc
Q 042766 352 VLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNN 431 (914)
Q Consensus 352 ~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 431 (914)
+.+. .++........+|+.|++++|...+.+|..++++++|+.|++++|..-+.+|..+ .+++|+.|++++|
T Consensus 764 ------~~~~-~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c 835 (1153)
T PLN03210 764 ------ERVQ-PLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGC 835 (1153)
T ss_pred ------cccc-ccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCC
Confidence 1111 1222223334579999999999888999999999999999999986555777765 7899999999998
Q ss_pred ccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCC-CccCCCCchhhhcccchhhhhcccCC
Q 042766 432 FLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASY-NKLTGDLPQQLLSITTLSLVLDLSNN 504 (914)
Q Consensus 432 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~~~~l~~~L~Ls~N 504 (914)
.....+|.. .++|+.|+|++|.++ .+|.++..+++|+.|++++ |++. .+|..+..+..+ +.++++++
T Consensus 836 ~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L-~~L~l~~C 903 (1153)
T PLN03210 836 SRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHL-ETVDFSDC 903 (1153)
T ss_pred Ccccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCC-CeeecCCC
Confidence 755556643 368999999999998 6899999999999999998 4555 688777777776 67777665
No 406
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.91 E-value=5.9e-25 Score=245.42 Aligned_cols=186 Identities=30% Similarity=0.403 Sum_probs=145.7
Q ss_pred ccccCcccCCccE-EEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceEeE
Q 042766 707 FSSSNMIGQGRFG-TVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 707 ~~~~~~lg~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
|...+++|.|+.| .||+|... ++.||||++-.+ ......+||..++.- +|||||++|+. .++..+.||
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~-----E~d~qF~YI 580 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE--GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCS-----EQDRQFLYI 580 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC--CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEee-----ccCCceEEE
Confidence 3445678999887 57999984 779999988532 335668999999998 59999999876 344568999
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC---C--CcEEEec
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY---D--MVAHVGD 859 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~---~--~~~ki~D 859 (914)
+.|.| ..+|.+++..... +.........+.+..|+++||++||+. +||||||||.||||+. + .+++|+|
T Consensus 581 alELC-~~sL~dlie~~~~--d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSD 654 (903)
T KOG1027|consen 581 ALELC-ACSLQDLIESSGL--DVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISD 654 (903)
T ss_pred EehHh-hhhHHHHHhcccc--chhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecc
Confidence 99999 5699999987511 111122145577889999999999998 9999999999999976 3 4799999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
||+++.+....... ....+..||-+|+|||++. ..++||+|+||++|+.
T Consensus 655 fglsKkl~~~~sS~-----~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYv 707 (903)
T KOG1027|consen 655 FGLSKKLAGGKSSF-----SRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYV 707 (903)
T ss_pred cccccccCCCcchh-----hcccCCCCcccccCHHHHhccccCcccchhhcCceEEEE
Confidence 99999876543222 2234568999999999996 3889999999999863
No 407
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.91 E-value=4.7e-24 Score=249.33 Aligned_cols=265 Identities=25% Similarity=0.317 Sum_probs=143.0
Q ss_pred CCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccccccccccccc
Q 042766 103 LRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDI 182 (914)
Q Consensus 103 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 182 (914)
-..|+|++|+++ .+|..+.. +|+.|++++|+|+ .+|.. +++|++|+|++|+|+ .+|.. .++|+.|+|++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~~--~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLPA--HITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCC-cCCcchhc--CCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeeccC
Confidence 346666666666 56665542 5666677666666 45532 356666666666666 34432 24555666666
Q ss_pred ccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCccc
Q 042766 183 NYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFP 262 (914)
Q Consensus 183 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 262 (914)
|.++ .+|..+ ++|+.|++++|+++ .+|.. +++|+.|+|++|+|++ +|.. ..
T Consensus 272 N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~l---p~----------------- 322 (788)
T PRK15387 272 NPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPAL---PS----------------- 322 (788)
T ss_pred Cchh-hhhhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CCCC---cc-----------------
Confidence 6655 334322 34555555555555 23331 2345555555555553 2221 12
Q ss_pred ccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhh
Q 042766 263 FDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVI 342 (914)
Q Consensus 263 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 342 (914)
+|+.|++++|+|++ +|.. ..+|++|+|++|+|+++++ . ..+|+.|++++|+|+.++.
T Consensus 323 --------~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~LP~-l---p~~L~~L~Ls~N~L~~LP~------- 379 (788)
T PRK15387 323 --------ELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLASLPT-L---PSELYKLWAYNNRLTSLPA------- 379 (788)
T ss_pred --------cccccccccCcccc-cccc---ccccceEecCCCccCCCCC-C---CcccceehhhccccccCcc-------
Confidence 34444444444442 2321 1245555555555553221 1 1344455555555554321
Q ss_pred cccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccC
Q 042766 343 FLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKN 422 (914)
Q Consensus 343 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 422 (914)
...+|+.|+|++|+|+ .+|... .+|+.|++++|+|++ +|... .+|+.|++++|+|+ .+|..+..+++
T Consensus 380 ---l~~~L~~LdLs~N~Lt-~LP~l~----s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~ 446 (788)
T PRK15387 380 ---LPSGLKELIVSGNRLT-SLPVLP----SELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSS 446 (788)
T ss_pred ---cccccceEEecCCccc-CCCCcc----cCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccC
Confidence 1134566666666665 344321 246666666666664 44432 35677888888887 56777888888
Q ss_pred CceeeecccccccccCccccC
Q 042766 423 LQQLSVFNNFLRGGIPSGLGN 443 (914)
Q Consensus 423 L~~L~L~~N~l~~~~p~~~~~ 443 (914)
|+.|+|++|.|++..+..+..
T Consensus 447 L~~LdLs~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 447 ETTVNLEGNPLSERTLQALRE 467 (788)
T ss_pred CCeEECCCCCCCchHHHHHHH
Confidence 888888888888777665533
No 408
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.90 E-value=5e-24 Score=250.66 Aligned_cols=195 Identities=27% Similarity=0.443 Sum_probs=157.0
Q ss_pred hcccccCcccCCccEEEEEEEEC----C---CcEEEEEEEeecc-CCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILG----D---DEMVVAVKVINLK-QKGASKSFVSECEALRNI-RHRNLIKIITICSSTD 775 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~----~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 775 (914)
++..+.+.+|+|+||.|++|... . ....||||..+.. ...+.+.+..|+++|+.+ +||||+.+.|+|..
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~-- 373 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ-- 373 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc--
Confidence 34456679999999999999753 1 2567999998743 334567899999999998 59999999999865
Q ss_pred CCCCceEeEEEecccCCCHHHHHhccC---Ccc-----cc--cCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCC
Q 042766 776 FEGVDFKALVFEYMENGSLEDWLHQSN---DQV-----EV--RKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPS 845 (914)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~~-----~~--~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~ 845 (914)
....++|+||++.|+|.++++..+ ... .. ..++..+.+.++.|||.|++||++. ++||||+..+
T Consensus 374 ---~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaR 447 (609)
T KOG0200|consen 374 ---DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAAR 447 (609)
T ss_pred ---CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhhh
Confidence 347899999999999999998776 100 01 2488999999999999999999999 9999999999
Q ss_pred CeeecCCCcEEEecccccccccccccccccCCCCccccccC--cccccccchh----hhhhcccCcccccccccC
Q 042766 846 NVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKG--TVGYVAPGKF----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 846 NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~G--T~~y~APE~~----~~~~~Di~s~g~~~~~~f 914 (914)
|||+.++..+||+|||+|+........... ...| ...|||||.+ +..++|+||||+.++|+|
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~y~~~-------~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~Eif 515 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDYYRTK-------SSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIF 515 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCceEec-------CCCCccceeecCHHHhccCcccccchhhHHHHHHHHHh
Confidence 999999999999999999965443322111 1122 2349999998 469999999999999987
No 409
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=5.7e-24 Score=248.58 Aligned_cols=246 Identities=23% Similarity=0.322 Sum_probs=175.6
Q ss_pred cccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeecc
Q 042766 174 KLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLT 253 (914)
Q Consensus 174 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 253 (914)
+|+.|++++|+++ .+|.. +++|++|+|++|+|+ .+|.. .++|+.|+|++|+++. +|..+ .+|+.|+++
T Consensus 223 ~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~~-Lp~lp---~~L~~L~Ls 290 (788)
T PRK15387 223 HITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLTH-LPALP---SGLCKLWIF 290 (788)
T ss_pred CCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeeccCCchhh-hhhch---hhcCEEECc
Confidence 3444444444444 23321 245555555555555 23432 2456666666666663 33322 456677777
Q ss_pred CCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCC
Q 042766 254 ENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTG 333 (914)
Q Consensus 254 ~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 333 (914)
+|+++. +|. ..++|+.|+|++|+|++ +|.. ..+|+.|++++|+|+++++ + ..+|+.|+|++|+|+.+
T Consensus 291 ~N~Lt~-LP~----~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~LP~--l--p~~Lq~LdLS~N~Ls~L 357 (788)
T PRK15387 291 GNQLTS-LPV----LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTSLPT--L--PSGLQELSVSDNQLASL 357 (788)
T ss_pred CCcccc-ccc----cccccceeECCCCcccc-CCCC---cccccccccccCccccccc--c--ccccceEecCCCccCCC
Confidence 887774 343 24689999999999985 4543 2468899999999986442 1 25899999999999986
Q ss_pred CCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccC
Q 042766 334 TANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTI 413 (914)
Q Consensus 334 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 413 (914)
+.. .++|+.|++++|+|+ .+|... .+|+.|++++|+|++ +|.. ..+|+.|++++|++++ +
T Consensus 358 P~l----------p~~L~~L~Ls~N~L~-~LP~l~----~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-I 417 (788)
T PRK15387 358 PTL----------PSELYKLWAYNNRLT-SLPALP----SGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-L 417 (788)
T ss_pred CCC----------Ccccceehhhccccc-cCcccc----cccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-C
Confidence 431 257889999999999 577532 468999999999995 5543 3679999999999995 5
Q ss_pred ChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCC
Q 042766 414 PDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNC 468 (914)
Q Consensus 414 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 468 (914)
|..+ .+|+.|+|++|+|+ .+|..++++++|+.|+|++|+|++..|..+..+
T Consensus 418 P~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 418 PMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred Ccch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 6543 46889999999999 789999999999999999999999888766444
No 410
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.90 E-value=9.3e-24 Score=248.79 Aligned_cols=333 Identities=17% Similarity=0.307 Sum_probs=189.2
Q ss_pred CCCCHhHHHHHHHHHHhcCCCCCCCCC----CCCCCCCCCccc----------------eeecCCCCceEEEecCCCCCc
Q 042766 31 GQTNETDRLALLAIKSQLHDPSGVTSS----WNNTMNFCQWTG----------------VTCGHRHQRLTELNLSSQRIG 90 (914)
Q Consensus 31 ~~~~~~~~~aLl~~k~~~~~~~~~~~~----w~~~~~~c~w~g----------------v~C~~~~~~v~~l~l~~~~l~ 90 (914)
+.+.++|.+.+++..+.+.-| ++..+ |.+++|+|.-.. |.|. +..||.+..-+....
T Consensus 58 ~~~~~~~~~~~~~~~~~l~~p-~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~--~~~vt~l~~~g~~~~ 134 (754)
T PRK15370 58 ETASPEEIKSKFECLRMLAFP-AYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGG--GKSVTYTRVTESEQA 134 (754)
T ss_pred CCCCHHHHHHHHHHHHHhcCC-chhhccccccCCCCcccccCCcchhhheeeecCCceEEecC--CCccccccccccccc
Confidence 345888999999999999644 34444 998899996543 5663 455666665543221
Q ss_pred cccCCCCCCCCCCCEEEc----CCCCCccc----------CCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhcc
Q 042766 91 GVLSPYVGNLSFLRYINL----ADNGFRGD----------IPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCA 156 (914)
Q Consensus 91 ~~~~~~l~~l~~L~~L~L----~~n~l~~~----------~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 156 (914)
.... +.-..-.+-.. ..+.-.+. +..+ -..+.+.|+++++.++ .+|..+. ++|+.|+|
T Consensus 135 ~~~~---~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~C--l~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~L 206 (754)
T PRK15370 135 SSAS---GSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDC--LKNNKTELRLKILGLT-TIPACIP--EQITTLIL 206 (754)
T ss_pred ccCC---CCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhh--cccCceEEEeCCCCcC-cCCcccc--cCCcEEEe
Confidence 1110 00000000000 00000000 0011 1124566666666666 4565543 35666666
Q ss_pred CCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCC
Q 042766 157 SNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGM 236 (914)
Q Consensus 157 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 236 (914)
++|+++ .+|..+. ++|++|+|++|+++ .+|..+. .+|+.|+|++|.++ .+|..+. ++|+.|+|++|+|+ .
T Consensus 207 s~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~ 276 (754)
T PRK15370 207 DNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-C 276 (754)
T ss_pred cCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-c
Confidence 666666 4555443 36667777777666 4555443 35677777777766 5555543 46777777777776 3
Q ss_pred CCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccc
Q 042766 237 FPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSS 316 (914)
Q Consensus 237 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 316 (914)
+|..+. .+|+.|++++|+|++ +|..+. ++|+.|++++|+++. +|..+. ++|+.|++++|.++++ |..+.
T Consensus 277 LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp---~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~L-P~~l~- 345 (754)
T PRK15370 277 LPENLP--EELRYLSVYDNSIRT-LPAHLP---SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTSL-PASLP- 345 (754)
T ss_pred cccccC--CCCcEEECCCCcccc-Ccccch---hhHHHHHhcCCcccc-CCcccc--ccceeccccCCccccC-Chhhc-
Confidence 455443 467777777777764 343322 467777888887773 454432 5788888888888763 44342
Q ss_pred cccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCcc----
Q 042766 317 LKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPG---- 392 (914)
Q Consensus 317 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~---- 392 (914)
++|+.|++++|+|+.++.. + .++|+.|+|++|+++ .+|..+.. .|+.|++++|++. .+|..
T Consensus 346 -~sL~~L~Ls~N~L~~LP~~-------l--p~~L~~LdLs~N~Lt-~LP~~l~~---sL~~LdLs~N~L~-~LP~sl~~~ 410 (754)
T PRK15370 346 -PELQVLDVSKNQITVLPET-------L--PPTITTLDVSRNALT-NLPENLPA---ALQIMQASRNNLV-RLPESLPHF 410 (754)
T ss_pred -CcccEEECCCCCCCcCChh-------h--cCCcCEEECCCCcCC-CCCHhHHH---HHHHHhhccCCcc-cCchhHHHH
Confidence 5788888888887754321 1 257888888888877 45654432 3555566666555 22322
Q ss_pred ccCCCCCcEEEcccCccc
Q 042766 393 IRNLVNLITFTLEVNQFH 410 (914)
Q Consensus 393 ~~~l~~L~~L~L~~N~l~ 410 (914)
++.++++..|++.+|.++
T Consensus 411 ~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 411 RGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred hhcCCCccEEEeeCCCcc
Confidence 222344455555555544
No 411
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.90 E-value=1.1e-24 Score=218.26 Aligned_cols=187 Identities=23% Similarity=0.266 Sum_probs=152.6
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeec--cCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC-CCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINL--KQKGASKSFVSECEALRNIRHRNLIKIITICSSTDF-EGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~~ 781 (914)
.+|.....+|.|+- .|..|-+.-.++.||+|+... ......++..+|..++..++|+||++++.++.-... +....
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46777788999988 777788888889999998742 234456788999999999999999999998653322 22235
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.|+||||| .+++.+.+.. .++-.....|..|++.|++|+|+. +|+||||||+||++..++.+||.|||
T Consensus 96 ~y~v~e~m-~~nl~~vi~~--------elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg 163 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVILM--------ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFG 163 (369)
T ss_pred HHHHHHhh-hhHHHHHHHH--------hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccch
Confidence 78999999 4699998873 355567888999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
+|+.-... -..+..+.|..|.|||++. ...+||||.||+..||
T Consensus 164 ~ar~e~~~---------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEl 210 (369)
T KOG0665|consen 164 LARTEDTD---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEL 210 (369)
T ss_pred hhcccCcc---------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHH
Confidence 99853221 1223468999999999995 4899999999999887
No 412
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.89 E-value=4.1e-24 Score=233.99 Aligned_cols=180 Identities=24% Similarity=0.282 Sum_probs=149.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.+.|.....+|.|+|+.|-++.+..+++..|+|++.... .+..+|+.++... +||||+++.+.+ .+....
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~-----~~~~~~ 391 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVY-----EDGKEI 391 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeeccee-----cCCcee
Confidence 456777788999999999999999999999999996442 2334677766655 699999999984 455689
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee-cCCCcEEEeccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL-DYDMVAHVGDFG 861 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl-~~~~~~ki~DFG 861 (914)
|+|||++.|+-+.+.+...+ ... .++..|+++|+.|+.|||++ ||||||+||+|||+ +..++++|+|||
T Consensus 392 ~~v~e~l~g~ell~ri~~~~------~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG 461 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSKP------EFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFG 461 (612)
T ss_pred eeeehhccccHHHHHHHhcc------hhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEec
Confidence 99999999998888776542 222 67788999999999999998 99999999999999 588999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchh----hhhhcccCccccccccc
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~ 913 (914)
.++..... ....+=|..|.|||+. ++.++|+||+|+++|+|
T Consensus 462 ~a~~~~~~-----------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~M 506 (612)
T KOG0603|consen 462 FWSELERS-----------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEM 506 (612)
T ss_pred hhhhCchh-----------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHH
Confidence 99876532 1123568899999999 56999999999999998
No 413
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.89 E-value=7.2e-24 Score=223.80 Aligned_cols=191 Identities=23% Similarity=0.295 Sum_probs=157.3
Q ss_pred HHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC------CCCcceEEeEeecC
Q 042766 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR------HRNLIKIITICSST 774 (914)
Q Consensus 701 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~~~ 774 (914)
.....+|.+....|+|-|+.|.+|++...|..||||+|... +...+.=.+|+++|++++ ..++++++..
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~---- 502 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRH---- 502 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHH----
Confidence 34457899999999999999999999988899999999733 333455678999999994 3467777765
Q ss_pred CCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC-C
Q 042766 775 DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD-M 853 (914)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~-~ 853 (914)
|....++|+|+|-+ .-+|.++++..+. ...+....+..++.|+.-||..|..+ +|+|.||||+|||+.+. .
T Consensus 503 -F~hknHLClVFE~L-slNLRevLKKyG~---nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~ 574 (752)
T KOG0670|consen 503 -FKHKNHLCLVFEPL-SLNLREVLKKYGR---NVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKN 574 (752)
T ss_pred -hhhcceeEEEehhh-hchHHHHHHHhCc---ccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcc
Confidence 55566999999988 5699999998764 34677788899999999999999988 99999999999999876 5
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.+||||||.|....+.+.. .+.-+..|.|||++. .+..|+||+||++||+|
T Consensus 575 iLKLCDfGSA~~~~eneit----------PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElY 629 (752)
T KOG0670|consen 575 ILKLCDFGSASFASENEIT----------PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELY 629 (752)
T ss_pred eeeeccCcccccccccccc----------HHHHHHhccCcceeecCcccCCccceeeceeeEEee
Confidence 7899999999877654431 233556799999994 58999999999999986
No 414
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.89 E-value=4.8e-23 Score=213.93 Aligned_cols=188 Identities=31% Similarity=0.470 Sum_probs=158.9
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc-chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEE
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG-ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALV 785 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 785 (914)
|...+.||+|++|.||+|++.++++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++... ...+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-----~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDP-----EPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecC-----CceEEE
Confidence 45678899999999999999988899999999765544 567899999999999999999999986433 468899
Q ss_pred EecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 786 FEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 786 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
+||+++++|.+++.... ..+++.....++.+++.++.|+|+. +++|+|++|+||+++.++.++|+|||.+..
T Consensus 76 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~ 147 (225)
T smart00221 76 MEYCEGGDLFDYLRKKG-----GKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARF 147 (225)
T ss_pred EeccCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeE
Confidence 99999999999997643 1178889999999999999999999 999999999999999999999999999987
Q ss_pred ccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 866 LSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
..... ........++..|+|||.+. +.++|+|++||++++|+
T Consensus 148 ~~~~~-------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~ 194 (225)
T smart00221 148 IHRDL-------AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELL 194 (225)
T ss_pred ecCcc-------cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHH
Confidence 64321 00122356888999999872 36899999999998875
No 415
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.89 E-value=1.9e-23 Score=204.18 Aligned_cols=182 Identities=22% Similarity=0.322 Sum_probs=148.3
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+.|.+.+.+|+|.||.+-.|+++++.+.+|+|.++. .....++|.+|..---.+ .|.||+.-|++. |+..+..+
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~-p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~va----Fqt~d~Yv 98 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPR-PQTTQADFVREFHYSFFLSPHQHIIDTYEVA----FQTSDAYV 98 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCc-chhhHHHHHHHhccceeeccchhhhHHHHHH----hhcCceEE
Confidence 478999999999999999999999999999999863 334567899998764445 489999887653 67778889
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec-CC-CcEEEeccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD-YD-MVAHVGDFG 861 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~-~~-~~~ki~DFG 861 (914)
++|||+|.|+|.+-+... .+-+....+++.|+++|+.|||++ .+||||||.+||||- .| .+||++|||
T Consensus 99 F~qE~aP~gdL~snv~~~-------GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG 168 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAA-------GIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFG 168 (378)
T ss_pred EeeccCccchhhhhcCcc-------cccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecc
Confidence 999999999999977653 466778889999999999999999 999999999999994 33 489999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccc
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVH 912 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~ 912 (914)
..+....-. ....-+..|-|||... .+.+|+|.||++++.
T Consensus 169 ~t~k~g~tV-----------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~ 217 (378)
T KOG1345|consen 169 LTRKVGTTV-----------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFY 217 (378)
T ss_pred cccccCcee-----------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeee
Confidence 987543211 0123456789999873 488999999999874
No 416
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.88 E-value=1.7e-22 Score=212.18 Aligned_cols=175 Identities=30% Similarity=0.433 Sum_probs=150.1
Q ss_pred ccEEEEEEEECCCcEEEEEEEeeccCCcc-hHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecccCCCHH
Q 042766 717 RFGTVYKGILGDDEMVVAVKVINLKQKGA-SKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLE 795 (914)
Q Consensus 717 ~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 795 (914)
+||.||+|++..+++.||+|++....... .+.+.+|++.+++++|+||+++++++... ...+++|||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDE-----DKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeC-----CEEEEEEeCCCCCCHH
Confidence 58999999999889999999997554444 68899999999999999999999986543 4789999999999999
Q ss_pred HHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccccccccc
Q 042766 796 DWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIAS 875 (914)
Q Consensus 796 ~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~ 875 (914)
+++.... .+++..+..++.+++.++.|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 76 ~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----- 141 (244)
T smart00220 76 DLLKKRG------RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----- 141 (244)
T ss_pred HHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-----
Confidence 9987542 378899999999999999999999 99999999999999999999999999998654321
Q ss_pred CCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 876 KTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 876 ~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
......|+..|+|||... +.++|+|++|+++++++
T Consensus 142 ----~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~ 180 (244)
T smart00220 142 ----LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELL 180 (244)
T ss_pred ----ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 112346889999999884 58999999999988764
No 417
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=1.6e-22 Score=213.00 Aligned_cols=136 Identities=26% Similarity=0.461 Sum_probs=119.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC-----C---CCcceEEeEeecCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR-----H---RNLIKIITICSSTDF 776 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~~~~~ 776 (914)
.+|.+.++||=|.|++||.|++.+..+.||+|+.+.. +.-.+....||++|++++ | ..||++++.+....
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG- 155 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG- 155 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC-
Confidence 6899999999999999999999999999999998633 334567889999999983 3 35999999987765
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 849 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl 849 (914)
..+.+.++|+|++ |.+|..+|+.... +.++...+.+|++||+.||.|||+.| +|||-||||+|||+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~Y----rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNY----RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCC----CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 4456899999999 8899999987654 67999999999999999999999987 99999999999998
No 418
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.87 E-value=2e-22 Score=237.61 Aligned_cols=259 Identities=19% Similarity=0.359 Sum_probs=179.3
Q ss_pred ccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCcc
Q 042766 67 WTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLS 146 (914)
Q Consensus 67 w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 146 (914)
|.-..|-. ...+.|++++++++. +|..+. +.|+.|+|++|+++ .+|..+. ++|++|+|++|+|+ .+|..+.
T Consensus 170 ~r~~~Cl~--~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~ 240 (754)
T PRK15370 170 QRMRDCLK--NNKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP 240 (754)
T ss_pred HHHHhhcc--cCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh
Confidence 33345633 346789999888874 565553 57899999999998 6776654 58999999999998 6777654
Q ss_pred ccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhccccc
Q 042766 147 RCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNL 226 (914)
Q Consensus 147 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 226 (914)
.+|+.|+|++|++. .+|..+. ++|++|+|++|+++ .+|..+. ++|+.|++++|+|++ +|..+. ++|+.|
T Consensus 241 --~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L 309 (754)
T PRK15370 241 --DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHL 309 (754)
T ss_pred --ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHH
Confidence 47889999999988 7787765 47889999999888 5677654 478888888888884 565443 468888
Q ss_pred ccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccC
Q 042766 227 NVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQF 306 (914)
Q Consensus 227 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 306 (914)
++++|+++. +|..+. ++|+.|++++|.+++ +|..+ .++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|
T Consensus 310 ~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l---~~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~L 379 (754)
T PRK15370 310 NVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASL---PPELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNAL 379 (754)
T ss_pred HhcCCcccc-CCcccc--ccceeccccCCcccc-CChhh---cCcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcC
Confidence 888888884 454432 577888888888775 45433 257777888887776 4565543 5677777777777
Q ss_pred CccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccC
Q 042766 307 KGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFG 361 (914)
Q Consensus 307 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 361 (914)
+.+++ .+. ..|+.|++++|+++.++.. +|.+++.++++..|++.+|.++
T Consensus 380 t~LP~-~l~--~sL~~LdLs~N~L~~LP~s---l~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 380 TNLPE-NLP--AALQIMQASRNNLVRLPES---LPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CCCCH-hHH--HHHHHHhhccCCcccCchh---HHHHhhcCCCccEEEeeCCCcc
Confidence 75433 232 3566777777777655432 3444445555666666666554
No 419
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.87 E-value=1.1e-21 Score=201.16 Aligned_cols=180 Identities=32% Similarity=0.505 Sum_probs=152.0
Q ss_pred ccCCccEEEEEEEECCCcEEEEEEEeeccCCc-chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecccC
Q 042766 713 IGQGRFGTVYKGILGDDEMVVAVKVINLKQKG-ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMEN 791 (914)
Q Consensus 713 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~ 791 (914)
||+|++|.||+|+...+++.+++|++...... ..+.+.+|++.++.++|++|+++++++... ...+++|||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE-----NHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC-----CeEEEEEecCCC
Confidence 68999999999999888999999999754332 346899999999999999999999986443 478999999999
Q ss_pred CCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC-CCcEEEecccccccccccc
Q 042766 792 GSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY-DMVAHVGDFGLAKFLSNHH 870 (914)
Q Consensus 792 gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DFGla~~~~~~~ 870 (914)
++|.+++.... ..+++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++|+|||.+.......
T Consensus 76 ~~l~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 76 GSLKDLLKENE-----GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred CcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence 99999987542 3578899999999999999999999 9999999999999999 8999999999998654321
Q ss_pred cccccCCCCccccccCcccccccchhhh-----hhcccCccccccccc
Q 042766 871 LDIASKTPSSSIGIKGTVGYVAPGKFFM-----LYTHIPSFSCTNVHH 913 (914)
Q Consensus 871 ~~~~~~~~~~~~~~~GT~~y~APE~~~~-----~~~Di~s~g~~~~~~ 913 (914)
. ......+...|++||.+.. .+.|+|++|++++++
T Consensus 148 ~--------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 148 S--------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred c--------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 1 1122457889999999753 889999999998764
No 420
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.87 E-value=3.2e-22 Score=208.63 Aligned_cols=192 Identities=28% Similarity=0.373 Sum_probs=153.5
Q ss_pred HHHHhhcccccCcccCCccEEEEEEEECC---CcEEEEEEEeeccCCcchHHHHHHHHHHHhcC-CCCcceEEeEeecCC
Q 042766 700 LSKATSEFSSSNMIGQGRFGTVYKGILGD---DEMVVAVKVINLKQKGASKSFVSECEALRNIR-HRNLIKIITICSSTD 775 (914)
Q Consensus 700 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 775 (914)
+......|...++||+|+|++||+|.+.. ..+.||+|.+.... ...++..|+++|..+. +.||+++.++
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~----- 103 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGC----- 103 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhh-----
Confidence 34445678899999999999999999876 77899999986443 3467899999999985 9999999988
Q ss_pred CCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC-CCc
Q 042766 776 FEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY-DMV 854 (914)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~-~~~ 854 (914)
+...+...+||||++..+..++.. .++..++..+.+.+..||+++|.+ ||||||+||.|++.+. .+.
T Consensus 104 ~rnnd~v~ivlp~~~H~~f~~l~~---------~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~r 171 (418)
T KOG1167|consen 104 FRNNDQVAIVLPYFEHDRFRDLYR---------SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQR 171 (418)
T ss_pred hccCCeeEEEecccCccCHHHHHh---------cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCC
Confidence 566678999999999999988875 456778889999999999999999 9999999999999985 467
Q ss_pred EEEecccccccccccc------------ccc------------------------ccCCCCccccccCcccccccchhh-
Q 042766 855 AHVGDFGLAKFLSNHH------------LDI------------------------ASKTPSSSIGIKGTVGYVAPGKFF- 897 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~------------~~~------------------------~~~~~~~~~~~~GT~~y~APE~~~- 897 (914)
-.|.|||+|....... ... ....+......+||++|.|||+++
T Consensus 172 g~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k 251 (418)
T KOG1167|consen 172 GVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR 251 (418)
T ss_pred ceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhh
Confidence 8899999997311100 000 011112234668999999999995
Q ss_pred ----hhhcccCcccccc
Q 042766 898 ----MLYTHIPSFSCTN 910 (914)
Q Consensus 898 ----~~~~Di~s~g~~~ 910 (914)
+.++||||.|+++
T Consensus 252 ~~~QttaiDiws~GVI~ 268 (418)
T KOG1167|consen 252 CPRQTTAIDIWSAGVIL 268 (418)
T ss_pred ccCcCCccceeecccee
Confidence 5889999999875
No 421
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.84 E-value=9.8e-21 Score=189.35 Aligned_cols=139 Identities=17% Similarity=0.151 Sum_probs=107.7
Q ss_pred cCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc--c-------h-----------------HHHHHHHHHHHhcCCCC
Q 042766 710 SNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG--A-------S-----------------KSFVSECEALRNIRHRN 763 (914)
Q Consensus 710 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~-------~-----------------~~~~~E~~~l~~l~h~n 763 (914)
.+.||+|+||.||+|++. +|+.||||+++..... . . ....+|++.+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999997 8999999999754211 1 1 12245999999998887
Q ss_pred cceEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHH-HhCCCCCcEecCC
Q 042766 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYL-HHHCQPPMVHGDL 842 (914)
Q Consensus 764 iv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~L-H~~~~~~ivHrDl 842 (914)
+.....+.. ...++||||++|+++....... ..++..++..++.|++.++.|+ |+. +|+||||
T Consensus 81 v~~p~~~~~-------~~~~iVmE~i~g~~l~~~~~~~------~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDl 144 (190)
T cd05147 81 IPCPEPILL-------KSHVLVMEFIGDDGWAAPRLKD------APLSESKARELYLQVIQIMRILYQDC---RLVHADL 144 (190)
T ss_pred CCCCcEEEe-------cCCEEEEEEeCCCCCcchhhhc------CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 644332211 1237999999988776543222 3578889999999999999999 677 9999999
Q ss_pred CCCCeeecCCCcEEEecccccccc
Q 042766 843 KPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 843 kp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+||+++ ++.++++|||+|...
T Consensus 145 kP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 145 SEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred CHHHEEEE-CCcEEEEEccccccC
Confidence 99999998 578999999999754
No 422
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.83 E-value=3.2e-20 Score=203.03 Aligned_cols=196 Identities=21% Similarity=0.283 Sum_probs=154.7
Q ss_pred cccccCcccCCccEEEEEEEECCCc-EEEEEEEeeccCCcchHHHHHHHHHHHhcCC----CCcceEEeEeecCCCCCCc
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDE-MVVAVKVINLKQKGASKSFVSECEALRNIRH----RNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~~~ 780 (914)
+|.+.+.||+|+||.||.|.+..++ +.+|+|............+..|+.++..+.. +++.++++... ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 7999999999999999999987664 6889998865433333378889999998873 57888887742 3445
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC-----CcE
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD-----MVA 855 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~-----~~~ 855 (914)
+.++||+.+ |.+|.++.+... ...++...+.+|+.|++.+|+++|+. |++||||||+|+.+... ..+
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~----~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~ 166 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNP----PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTL 166 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCC----CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceE
Confidence 789999988 889999886554 25799999999999999999999999 99999999999999865 469
Q ss_pred EEeccccccccc--ccccccccCCCCc-cccccCcccccccchh----hhhhcccCcccccccccC
Q 042766 856 HVGDFGLAKFLS--NHHLDIASKTPSS-SIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 856 ki~DFGla~~~~--~~~~~~~~~~~~~-~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~f 914 (914)
.+.|||+|+.+. ...... ...+.. ...+.||..|++++.. .+.+.|+||++.++++++
T Consensus 167 ~llDfGlar~~~~~~~~~~~-~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~ 231 (322)
T KOG1164|consen 167 YLLDFGLARRFKYVGDSGGN-LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELL 231 (322)
T ss_pred EEEecCCCccccccCCCCcc-cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHh
Confidence 999999999333 222111 111112 3456799999999987 469999999998888764
No 423
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.83 E-value=7.4e-21 Score=194.85 Aligned_cols=204 Identities=19% Similarity=0.300 Sum_probs=159.3
Q ss_pred HHHHHHHhhcccccCcccCCccEEEEEEEECCCc-----EEEEEEEeecc-CCcchHHHHHHHHHHHhcCCCCcceEEeE
Q 042766 697 YAELSKATSEFSSSNMIGQGRFGTVYKGILGDDE-----MVVAVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIITI 770 (914)
Q Consensus 697 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 770 (914)
.+++.....+++....+.+|.||.||+|.+++.+ +.|-+|.++.. ++-....+..|.-.+..+.|||+..+.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 3455566667888889999999999999887433 33555655422 23344678899999999999999999999
Q ss_pred eecCCCCCCceEeEEEecccCCCHHHHHhccCC--cccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCee
Q 042766 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSND--QVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVL 848 (914)
Q Consensus 771 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NIL 848 (914)
+.. .....++++.++.-|+|..|+...+. ....+.++..+...++.|++.|++|||++ +|||.||..+|.+
T Consensus 356 ~ie----~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCv 428 (563)
T KOG1024|consen 356 SIE----DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCV 428 (563)
T ss_pred Eee----ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcce
Confidence 854 34567889999999999999983322 22356788889999999999999999999 9999999999999
Q ss_pred ecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchh----hhhhcccCccccccccc
Q 042766 849 LDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 849 l~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~ 913 (914)
||+.-.|||+|=.++|.+-..++..-.. .......|||||.+ ++.++|+||||+++-|+
T Consensus 429 Idd~LqVkltDsaLSRDLFP~DYhcLGD------nEnRPvkWMslEal~n~~yssasDvWsfGVllWEL 491 (563)
T KOG1024|consen 429 IDDQLQVKLTDSALSRDLFPGDYHCLGD------NENRPVKWMSLEALQNSHYSSASDVWSFGVLLWEL 491 (563)
T ss_pred ehhheeEEeccchhccccCcccccccCC------CCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHH
Confidence 9999999999999998654433322221 12345689999999 56999999999988765
No 424
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.82 E-value=7.9e-20 Score=183.80 Aligned_cols=139 Identities=22% Similarity=0.202 Sum_probs=110.2
Q ss_pred cCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcc--------------------------hHHHHHHHHHHHhcCCCC
Q 042766 710 SNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--------------------------SKSFVSECEALRNIRHRN 763 (914)
Q Consensus 710 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~h~n 763 (914)
...||+|+||.||+|++. +|+.||||+++...... ...+.+|++.+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 468999999999999987 89999999997542110 123467899999999998
Q ss_pred cceEEeEeecCCCCCCceEeEEEecccCCCHHHH-HhccCCcccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCcEecC
Q 042766 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLEDW-LHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH-HCQPPMVHGD 841 (914)
Q Consensus 764 iv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~-~~~~~ivHrD 841 (914)
+.....+... ..++||||++|+++... +.. ..++..++..++.|++.++.|+|+ . +|+|||
T Consensus 81 i~~p~~~~~~-------~~~lVmE~~~g~~~~~~~l~~-------~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrD 143 (190)
T cd05145 81 VPVPEPILLK-------KNVLVMEFIGDDGSPAPRLKD-------VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGD 143 (190)
T ss_pred CCCceEEEec-------CCEEEEEEecCCCchhhhhhh-------ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCC
Confidence 7544433211 23799999998865443 322 346778889999999999999999 8 999999
Q ss_pred CCCCCeeecCCCcEEEeccccccccc
Q 042766 842 LKPSNVLLDYDMVAHVGDFGLAKFLS 867 (914)
Q Consensus 842 lkp~NILl~~~~~~ki~DFGla~~~~ 867 (914)
|||+||+++ ++.++|+|||+|+...
T Consensus 144 lkP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 144 LSEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred CChhhEEEE-CCCEEEEEcccceecC
Confidence 999999999 8899999999998654
No 425
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=4.8e-20 Score=185.72 Aligned_cols=174 Identities=16% Similarity=0.153 Sum_probs=130.3
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHH---------HHHHHHHHHhcCCCCcceEEeEeec
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKS---------FVSECEALRNIRHRNLIKIITICSS 773 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~niv~l~~~~~~ 773 (914)
...+|...+.+|+|+||.||.+.. ++..+|+|+++.......+. +.+|+..++++.||+|..+..++..
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 457899999999999999999655 35579999997543333222 6899999999999999999887543
Q ss_pred CCC---CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec
Q 042766 774 TDF---EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 850 (914)
Q Consensus 774 ~~~---~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~ 850 (914)
... ......++||||++|.+|.++.. .+. ....+++.++..+|+. +++|||+||+||+++
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~ 169 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE----------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVS 169 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh----------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEe
Confidence 321 11235789999999999988732 122 2456899999999999 999999999999999
Q ss_pred CCCcEEEecccccccccccccccccCCCCccccccCcccccccchhhhhhcccCcccccccc
Q 042766 851 YDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFMLYTHIPSFSCTNVH 912 (914)
Q Consensus 851 ~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~~~~Di~s~g~~~~~ 912 (914)
.+| ++++|||..+...... +. ...-=|.-++.+.|+|++|+|++.
T Consensus 170 ~~g-i~liDfg~~~~~~e~~---a~-------------d~~vler~y~~~~di~~lg~~~~~ 214 (232)
T PRK10359 170 KNG-LRIIDLSGKRCTAQRK---AK-------------DRIDLERHYGIKNEIKDLGYYLLI 214 (232)
T ss_pred CCC-EEEEECCCcccccchh---hH-------------HHHHHHhHhcccccccceeEeehH
Confidence 998 9999999887543211 00 001122234578999999999764
No 426
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.82 E-value=9.1e-20 Score=183.56 Aligned_cols=189 Identities=21% Similarity=0.335 Sum_probs=155.6
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCceEeE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
.|.+.++||+|.||+++.|+.--+++.||||.-..+++ ..++..|.+..+.+. .+.|...|.|. +.+.+-.+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFG-----qeG~~NiL 101 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFG-----QEGKYNIL 101 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeec-----cccchhhh
Confidence 79999999999999999999998999999998754433 356778888888875 68888887662 33446789
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC-----cEEEec
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM-----VAHVGD 859 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~-----~~ki~D 859 (914)
|||.+ |.+|+|.+.-.+ +.++...+.-+|.|++.-++|+|++ ..|.|||||+|+||...+ .+.|+|
T Consensus 102 VidLL-GPSLEDLFD~Cg-----R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiD 172 (449)
T KOG1165|consen 102 VIDLL-GPSLEDLFDLCG-----RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIID 172 (449)
T ss_pred hhhhh-CcCHHHHHHHhc-----CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEe
Confidence 99998 889999988654 6899999999999999999999999 999999999999997543 588999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccc
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNV 911 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~ 911 (914)
||+|+.+.++.... ..+..+.....||.+||+=..-. +.+.|.-|+|=++.
T Consensus 173 FGmAK~YrDp~Tkq-HIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFm 227 (449)
T KOG1165|consen 173 FGMAKEYRDPKTKQ-HIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFM 227 (449)
T ss_pred ccchhhhcCccccc-cCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhh
Confidence 99999998876432 23344556778999999987764 47888888887644
No 427
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.82 E-value=8.1e-20 Score=175.95 Aligned_cols=192 Identities=23% Similarity=0.327 Sum_probs=152.8
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCC-CCcceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRH-RNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~~~~~ 782 (914)
...|...++||.|+||.+|.|.....|+.||||+-.. .....++..|..+.+.+++ ..|..+..|. ....+-
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~--~a~hpqL~yEskvY~iL~~g~GiP~i~~y~-----~e~~yn 86 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESS--KAKHPQLLYESKVYRILQGGVGIPHIRHYG-----TEKDYN 86 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecc--cCCCcchhHHHHHHHHhccCCCCchhhhhc-----cccccc
Confidence 4679999999999999999999999999999998642 2334567889999999875 4566666553 334577
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC---CcEEEec
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVGD 859 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~---~~~ki~D 859 (914)
.+|||.. |.+|++.+.-. .+.++...++-.|-|++.-++|+|.+ +.|||||||+|+|+.-+ ..+.++|
T Consensus 87 vlVMdLL-GPsLEdLfnfC-----~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LID 157 (341)
T KOG1163|consen 87 VLVMDLL-GPSLEDLFNFC-----SRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLID 157 (341)
T ss_pred eeeeecc-CccHHHHHHHH-----hhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEe
Confidence 8999998 88999988643 25788899999999999999999999 99999999999999644 4688999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccc
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVH 912 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~ 912 (914)
||+|+.+.+...... -+..+.....||.+|.+=... ++.+.|.-|+|.++.+
T Consensus 158 FGLaKky~d~~t~~H-Ipyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmY 213 (341)
T KOG1163|consen 158 FGLAKKYRDIRTRQH-IPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMY 213 (341)
T ss_pred ccchhhhcccccccc-CccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeee
Confidence 999998876543222 223345567899999887655 4688999999987654
No 428
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.80 E-value=5.7e-21 Score=174.38 Aligned_cols=165 Identities=30% Similarity=0.559 Sum_probs=124.0
Q ss_pred cCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccc
Q 042766 121 IGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIE 200 (914)
Q Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 200 (914)
+.++.+.+.|-||+|+++ .+|+.++.+.+|+.|++++|+++ .+|.+++++++|+.|+++.|++. .+|..||.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 445666777777777777 77777888888888888888887 77888888888888888888887 7888888888888
Q ss_pred eeecccCCCC-CCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccC
Q 042766 201 VIRITENSLG-GKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGG 279 (914)
Q Consensus 201 ~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~ 279 (914)
+|||+.|++. ..+|..|..+..|+.|+|++|.+. .+|..++++++|+.|.+.+|.+- .+|.++. .+++|++|++.+
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig-~lt~lrelhiqg 182 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIG-DLTRLRELHIQG 182 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHH-HHHHHHHHhccc
Confidence 8888888876 457888888888888999888887 67777788888877777777765 2454443 566666666666
Q ss_pred ccCCCCCCCcccc
Q 042766 280 NNFVGSIPDSLSN 292 (914)
Q Consensus 280 N~l~~~~p~~~~~ 292 (914)
|+++ .+|..+++
T Consensus 183 nrl~-vlppel~~ 194 (264)
T KOG0617|consen 183 NRLT-VLPPELAN 194 (264)
T ss_pred ceee-ecChhhhh
Confidence 6666 44544443
No 429
>PRK10345 hypothetical protein; Provisional
Probab=99.79 E-value=1.3e-18 Score=175.33 Aligned_cols=142 Identities=18% Similarity=0.337 Sum_probs=109.3
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-----CCCCcceEEeEeecCCCCCCce
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-----RHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~~~~~~~ 781 (914)
+...+.||+|+||.||. +..++.. +||++........+.+.+|+.+++++ +||||++++|++.+.. +.+.
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~--g~g~ 78 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC--GTGY 78 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC--CCeE
Confidence 34567899999999995 6666555 69988765555667899999999999 6799999999975432 2234
Q ss_pred -EeEEEec--ccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHH-HHHHhCCCCCcEecCCCCCCeeecC----CC
Q 042766 782 -KALVFEY--MENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAI-EYLHHHCQPPMVHGDLKPSNVLLDY----DM 853 (914)
Q Consensus 782 -~~lv~e~--~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl-~~LH~~~~~~ivHrDlkp~NILl~~----~~ 853 (914)
..+|||| +++|+|.+++++. .+++. ..++.|++.++ +|||++ +||||||||+|||++. ++
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~-------~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~ 146 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQC-------RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEV 146 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHcc-------cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCC
Confidence 3479999 5579999999753 23443 35677888777 999999 9999999999999974 34
Q ss_pred cEEEec-cccccc
Q 042766 854 VAHVGD-FGLAKF 865 (914)
Q Consensus 854 ~~ki~D-FGla~~ 865 (914)
.++|+| ||.+..
T Consensus 147 ~~~LiDg~G~~~~ 159 (210)
T PRK10345 147 IPVVCDNIGESTF 159 (210)
T ss_pred cEEEEECCCCcce
Confidence 899999 555443
No 430
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.77 E-value=2.6e-21 Score=212.80 Aligned_cols=258 Identities=22% Similarity=0.269 Sum_probs=128.1
Q ss_pred EecCCCCCc-cccCCCCCCCCCCCEEEcCCCCCcc----cCCcccCCCCCCCeeecCCCCCCC------cCCCCccccCC
Q 042766 82 LNLSSQRIG-GVLSPYVGNLSFLRYINLADNGFRG----DIPQEIGNLFRLEKLALSNNSFSG------TIPTNLSRCSN 150 (914)
Q Consensus 82 l~l~~~~l~-~~~~~~l~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~------~~p~~l~~l~~ 150 (914)
|+|..+.++ ......+..++.|++|+++++.++. .++..+...+.|++|+++++.+.+ .++..+..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 566666665 2334445566667777777777643 245555666667777777766652 12233445555
Q ss_pred cchhccCCCcccCCCChhcccccc---ccccccccccccC----cCCcccccc-cccceeecccCCCCCCCCccchhhhc
Q 042766 151 LIHFCASNNKLEGQIPKEIGNLLK---LQRLSVDINYLTG----QLPDSVGNL-SAIEVIRITENSLGGKIPTTLGLLRR 222 (914)
Q Consensus 151 L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~ 222 (914)
|++|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.+++..+.
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~------- 155 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCE------- 155 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHH-------
Confidence 555555555555444444444443 5555555555542 111223333 4444444444444421111
Q ss_pred ccccccccccccCCCCCccccccccceeeccCCcccCccccc---ccccCcccceeeccCccCCCC----CCCccccccc
Q 042766 223 LVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFD---ILLNLPNLKKLGIGGNNFVGS----IPDSLSNASN 295 (914)
Q Consensus 223 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~ 295 (914)
.++..+..+.+|++|++++|.+++..... .+..+++|++|+|++|.+.+. ++..+..+++
T Consensus 156 -------------~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~ 222 (319)
T cd00116 156 -------------ALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKS 222 (319)
T ss_pred -------------HHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCC
Confidence 11222333444555555555554211111 111334566666666655422 2233445566
Q ss_pred cccccccCccCCcccccccc-----ccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccC
Q 042766 296 LELLDLPSNQFKGKVSIDFS-----SLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFG 361 (914)
Q Consensus 296 L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 361 (914)
|++|++++|++++.....+. ..+.|+.|++++|.++..... .+...+..+++|+++++++|.++
T Consensus 223 L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~--~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 223 LEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAK--DLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred CCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHH--HHHHHHhcCCCccEEECCCCCCc
Confidence 77777777766643222221 125666666666666532111 12333445566677777777666
No 431
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.77 E-value=1.3e-20 Score=172.01 Aligned_cols=152 Identities=26% Similarity=0.471 Sum_probs=85.1
Q ss_pred ceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccC
Q 042766 78 RLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCAS 157 (914)
Q Consensus 78 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 157 (914)
.+|.|-|++|.++ .+||.+++|.+|+.|++++|+++ .+|.+++.+++|++|+++-|++. ..|..|+.++.|+.|||+
T Consensus 34 ~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldlt 110 (264)
T KOG0617|consen 34 NITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLT 110 (264)
T ss_pred hhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhcc
Confidence 3455555555553 34555555555555555555555 55555555555555555555555 555555555555555555
Q ss_pred CCcccC-CCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhccccccccccccc
Q 042766 158 NNKLEG-QIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFS 234 (914)
Q Consensus 158 ~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 234 (914)
+|++.. .+|..|..++.|+.|+|+.|.+. .+|..++++++|+.|.+.+|.+- .+|..++.+.+|++|.+.+|+++
T Consensus 111 ynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 111 YNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 555542 34555555555555555555555 55555555555555555555554 45555555555555555555555
No 432
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.77 E-value=1.5e-20 Score=206.71 Aligned_cols=286 Identities=22% Similarity=0.252 Sum_probs=142.7
Q ss_pred eeeccCccCC-CCCCCccccccccccccccCccCCcc----ccccccccccccceeccCCcCCCCCCCCcchhhcccCCC
Q 042766 274 KLGIGGNNFV-GSIPDSLSNASNLELLDLPSNQFKGK----VSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCS 348 (914)
Q Consensus 274 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~ 348 (914)
.|+|+++.++ ...+..+..+++|+.|+++++.++.. ++..+...++|++|+++++.+...+.....++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4566666665 33344455566677777777766432 223334445566666666555421111111223344455
Q ss_pred CCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccc----cCChhhhcc-cCC
Q 042766 349 SLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHG----TIPDVISEL-KNL 423 (914)
Q Consensus 349 ~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l-~~L 423 (914)
+|+.|++++|.+.+..+..+..+.. . ++|++|++++|++++ .+...+..+ ++|
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~---------------------~-~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L 139 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLR---------------------S-SSLQELKLNNNGLGDRGLRLLAKGLKDLPPAL 139 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhc---------------------c-CcccEEEeeCCccchHHHHHHHHHHHhCCCCc
Confidence 5555555555554333333322221 0 124444444444441 112223333 455
Q ss_pred ceeeecccccccc----cCccccCCCCCCeEEeeCCcCCCC----CCCccCCCCCccccccCCCccCCCCchhhhcccch
Q 042766 424 QQLSVFNNFLRGG----IPSGLGNLTKLGSLDLGSNSLQGN----IPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTL 495 (914)
Q Consensus 424 ~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l 495 (914)
+.|++++|.+++. ++..+..+++|++|+|++|.+++. ++..+..+++|+.|++++|.+++....
T Consensus 140 ~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~-------- 211 (319)
T cd00116 140 EKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGAS-------- 211 (319)
T ss_pred eEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHH--------
Confidence 5555555555421 122334444555555555555421 122223334444444444444311110
Q ss_pred hhhhcccCCccCCCccccccccccceeecccCCccccccCccccc-----cccccEEEeeccccc----ccCCcchhccC
Q 042766 496 SLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLST-----CVSLEYLDISINSFY----GVIPLSFRFLK 566 (914)
Q Consensus 496 ~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~----~~~p~~~~~l~ 566 (914)
.++..+..+++|++|++++|++++.....+.. .+.|+.|++++|.++ ..+...+..++
T Consensus 212 -------------~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~ 278 (319)
T cd00116 212 -------------ALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKE 278 (319)
T ss_pred -------------HHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCC
Confidence 11223445667777777777776533333222 367788888887775 22334455667
Q ss_pred CCCEEEccCCccccc----cCcccccc-CCCCeEeCCCCcc
Q 042766 567 SIKALNVSSNNLSGK----IPEFLENL-SFLEFLNLSYNYF 602 (914)
Q Consensus 567 ~L~~L~Ls~N~l~~~----~p~~~~~l-~~L~~L~ls~N~l 602 (914)
+|+.+++++|.++.. ....+... +.|+.+|+.+|+|
T Consensus 279 ~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 279 SLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 788888888888744 44444444 6778888877764
No 433
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.76 E-value=1.8e-19 Score=221.19 Aligned_cols=147 Identities=12% Similarity=0.162 Sum_probs=102.4
Q ss_pred cCC-CCcceEEeEeecCCCC--CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCC
Q 042766 759 IRH-RNLIKIITICSSTDFE--GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQP 835 (914)
Q Consensus 759 l~h-~niv~l~~~~~~~~~~--~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~ 835 (914)
.+| +||.++++++...... .....+.+|||+ +++|.+++.... ..+++.+++.++.||++||+|||++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~--- 99 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD-----RSVDAFECFHVFRQIVEIVNAAHSQ--- 99 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc-----ccccHHHHHHHHHHHHHHHHHHHhC---
Confidence 345 4777777765222211 123467788988 669999997532 4689999999999999999999999
Q ss_pred CcEecCCCCCCeeecCC-------------------CcEEEecccccccccccccc------c-c-cCCCCccccccCcc
Q 042766 836 PMVHGDLKPSNVLLDYD-------------------MVAHVGDFGLAKFLSNHHLD------I-A-SKTPSSSIGIKGTV 888 (914)
Q Consensus 836 ~ivHrDlkp~NILl~~~-------------------~~~ki~DFGla~~~~~~~~~------~-~-~~~~~~~~~~~GT~ 888 (914)
+||||||||+|||++.. +.+|++|||+++........ . . ...+......+||+
T Consensus 100 gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 179 (793)
T PLN00181 100 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMS 179 (793)
T ss_pred CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCc
Confidence 99999999999999654 44556666666532110000 0 0 00001112346899
Q ss_pred cccccchhh----hhhcccCcccccccccC
Q 042766 889 GYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 889 ~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.|||||++. +.++|||||||++|||+
T Consensus 180 ~Y~APE~~~~~~~~~~sDVwSlGviL~ELl 209 (793)
T PLN00181 180 WYTSPEEDNGSSSNCASDVYRLGVLLFELF 209 (793)
T ss_pred ceEChhhhccCCCCchhhhhhHHHHHHHHh
Confidence 999999984 68999999999999985
No 434
>smart00090 RIO RIO-like kinase.
Probab=99.75 E-value=6.3e-18 Score=174.95 Aligned_cols=144 Identities=19% Similarity=0.181 Sum_probs=112.6
Q ss_pred hcccccCcccCCccEEEEEEE-ECCCcEEEEEEEeeccCCc------------------------chHHHHHHHHHHHhc
Q 042766 705 SEFSSSNMIGQGRFGTVYKGI-LGDDEMVVAVKVINLKQKG------------------------ASKSFVSECEALRNI 759 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l 759 (914)
.-|++.+.||+|+||.||+|+ +..+|+.||+|+++..... ....+.+|++.++++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357888999999999999999 6668999999999743210 012356899999999
Q ss_pred CCCC--cceEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC-
Q 042766 760 RHRN--LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPP- 836 (914)
Q Consensus 760 ~h~n--iv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~- 836 (914)
.+.. +.+++++ ...++||||++|+++..+.... ......++..++.|++.+++|+|+. +
T Consensus 108 ~~~~i~~p~~~~~---------~~~~lV~E~~~g~~L~~~~~~~------~~~~~~~~~~i~~qi~~~l~~LH~~---g~ 169 (237)
T smart00090 108 YEAGVPVPKPIAW---------RRNVLVMEFIGGDGLPAPRLKD------VEPEEEEEFELYDDILEEMRKLYKE---GE 169 (237)
T ss_pred HhcCCCCCeeeEe---------cCceEEEEEecCCccccccccc------CCcchHHHHHHHHHHHHHHHHHHhc---CC
Confidence 7633 4444443 1247999999998887654322 2345556788999999999999999 8
Q ss_pred cEecCCCCCCeeecCCCcEEEeccccccccc
Q 042766 837 MVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867 (914)
Q Consensus 837 ivHrDlkp~NILl~~~~~~ki~DFGla~~~~ 867 (914)
|+|||+||+||+++ ++.++++|||.|+...
T Consensus 170 iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 170 LVHGDLSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EEeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence 99999999999999 8899999999998654
No 435
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.74 E-value=1.2e-17 Score=184.32 Aligned_cols=190 Identities=33% Similarity=0.476 Sum_probs=151.8
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc---chHHHHHHHHHHHhcCCC-CcceEEeEeecCCCCCCceE
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG---ASKSFVSECEALRNIRHR-NLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~~~~~ 782 (914)
|...+.+|.|+||.||++.+. ..+|+|.+...... ....+.+|+.+++.+.|+ +|+++++++. .....
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQ-----DEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEe-----cCCEE
Confidence 667788999999999999987 67899998754332 367899999999999988 7999999862 22347
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC-cEEEeccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM-VAHVGDFG 861 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~-~~ki~DFG 861 (914)
+++++|+.++++.+++...... ..++......++.|++.++.|+|+. +++|||+||+||+++..+ .++++|||
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg 147 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRK---GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFG 147 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccC
Confidence 9999999999999777654211 2688889999999999999999999 899999999999999988 79999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-------hhhcccCcccccccc
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVH 912 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~ 912 (914)
.++............ .......||..|+|||... ....|+|++|+++++
T Consensus 148 ~~~~~~~~~~~~~~~--~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~ 203 (384)
T COG0515 148 LAKLLPDPGSTSSIP--ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYE 203 (384)
T ss_pred cceecCCCCcccccc--ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHH
Confidence 998554322111000 1223568999999999774 368999999987765
No 436
>PLN03150 hypothetical protein; Provisional
Probab=99.72 E-value=1.6e-17 Score=195.99 Aligned_cols=151 Identities=31% Similarity=0.498 Sum_probs=114.8
Q ss_pred CCCHhHHHHHHHHHHhcCCCCCCCCCCCCCCCCC----CccceeecCC--C--CceEEEecCCCCCccccCCCCCCCCCC
Q 042766 32 QTNETDRLALLAIKSQLHDPSGVTSSWNNTMNFC----QWTGVTCGHR--H--QRLTELNLSSQRIGGVLSPYVGNLSFL 103 (914)
Q Consensus 32 ~~~~~~~~aLl~~k~~~~~~~~~~~~w~~~~~~c----~w~gv~C~~~--~--~~v~~l~l~~~~l~~~~~~~l~~l~~L 103 (914)
.+.++|..||+++|+++.++.. .+|. +..|| .|.||.|+.. . .+|+.|+|+++++.|.+|+.++.+++|
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~~--~~W~-g~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L 444 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPLR--FGWN-GDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHL 444 (623)
T ss_pred ccCchHHHHHHHHHHhcCCccc--CCCC-CCCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCC
Confidence 4578899999999999975542 4897 43443 7999999532 2 257888888888888888888888888
Q ss_pred CEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccc-cccccccccc
Q 042766 104 RYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNL-LKLQRLSVDI 182 (914)
Q Consensus 104 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~ 182 (914)
++|+|++|.++|.+|..++++++|+.|||++|+++|.+|..++++++|++|+|++|+++|.+|..++.+ .++..+++++
T Consensus 445 ~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~ 524 (623)
T PLN03150 445 QSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTD 524 (623)
T ss_pred CEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecC
Confidence 888888888888888888888888888888888888888878888888888888888877777777653 3555666666
Q ss_pred ccc
Q 042766 183 NYL 185 (914)
Q Consensus 183 N~l 185 (914)
|..
T Consensus 525 N~~ 527 (623)
T PLN03150 525 NAG 527 (623)
T ss_pred Ccc
Confidence 653
No 437
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.70 E-value=1e-16 Score=157.77 Aligned_cols=178 Identities=15% Similarity=0.037 Sum_probs=123.1
Q ss_pred cccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC----cchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCceE
Q 042766 708 SSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK----GASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 708 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.+...|++|+||+||.+.. .+..++.+.+..... .....+.+|+++|+++. |++|++++++ ...
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---------~~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW---------DGR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---------cCE
Confidence 4567899999999997665 566777776653321 11236889999999995 5789999875 235
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCC-CCCCeeecCCCcEEEeccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDL-KPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDl-kp~NILl~~~~~~ki~DFG 861 (914)
+++|||++|.+|.+.... ....++.|++.+++++|++ ||+|||| ||+|||++.++.++|+|||
T Consensus 74 ~lvmeyI~G~~L~~~~~~-------------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG 137 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPPR-------------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQ 137 (218)
T ss_pred EEEEeeecCccHHhhhhh-------------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECC
Confidence 899999999998764321 1134678999999999999 9999999 7999999999999999999
Q ss_pred ccccccccccc---cccCCCC--ccccccCcccccccchhhh------hhcccCcccccccc
Q 042766 862 LAKFLSNHHLD---IASKTPS--SSIGIKGTVGYVAPGKFFM------LYTHIPSFSCTNVH 912 (914)
Q Consensus 862 la~~~~~~~~~---~~~~~~~--~~~~~~GT~~y~APE~~~~------~~~Di~s~g~~~~~ 912 (914)
+|......... .....-. ...-...++.|++|+.... .+.+-.+-|+-+|.
T Consensus 138 ~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~ 199 (218)
T PRK12274 138 LAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYR 199 (218)
T ss_pred CceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHH
Confidence 99854321100 0000000 0112237889999987632 33344455655554
No 438
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.70 E-value=1.3e-16 Score=161.85 Aligned_cols=143 Identities=24% Similarity=0.231 Sum_probs=110.3
Q ss_pred HHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc----------------------chHHHHHHHHHHH
Q 042766 700 LSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG----------------------ASKSFVSECEALR 757 (914)
Q Consensus 700 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~ 757 (914)
+.....-|...+.||+|+||.||+|... +++.||||+++..... ....+.+|+.++.
T Consensus 10 ~~~~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 10 LVKRGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHcCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 3333334778899999999999999885 7899999987643210 1123678899999
Q ss_pred hcCCCC--cceEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCC
Q 042766 758 NIRHRN--LIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQP 835 (914)
Q Consensus 758 ~l~h~n--iv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~ 835 (914)
++.|++ +++.++. ...++||||++|+++.+.... .....++.+++.++.++|+.
T Consensus 89 ~l~~~~i~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~~------------~~~~~~~~~i~~~l~~lh~~--- 144 (198)
T cd05144 89 ALYEEGFPVPKPIDW---------NRHAVVMEYIDGVELYRVRVL------------EDPEEVLDEILEEIVKAYKH--- 144 (198)
T ss_pred HHHHcCCCCCceeec---------CCceEEEEEeCCcchhhcccc------------ccHHHHHHHHHHHHHHHHHC---
Confidence 998874 4444332 235899999999998765321 23456889999999999998
Q ss_pred CcEecCCCCCCeeecCCCcEEEeccccccccc
Q 042766 836 PMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867 (914)
Q Consensus 836 ~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~ 867 (914)
+|+||||||+||++++++.++|+|||+|....
T Consensus 145 gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 145 GIIHGDLSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CCCcCCCCcccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999999999999997543
No 439
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.69 E-value=2.4e-16 Score=162.06 Aligned_cols=135 Identities=21% Similarity=0.339 Sum_probs=109.6
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccCCc--------chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG--------ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
+.||+|++|.||+|++ .+..|++|+....... ....+.+|++++..+.|++|.....++... ...
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP-----ENF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC-----CCC
Confidence 5799999999999988 4567889976533211 124678899999999999887666654322 356
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||++|++|.+++.... + .+..++.+++.++.++|+. +++|||++|+||+++ ++.++++|||.
T Consensus 75 ~lv~e~~~G~~L~~~~~~~~---------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~ 140 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSNG---------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGL 140 (211)
T ss_pred EEEEEEeCCcCHHHHHHhcc---------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCc
Confidence 89999999999999986431 1 7788999999999999999 999999999999999 78999999999
Q ss_pred cccc
Q 042766 863 AKFL 866 (914)
Q Consensus 863 a~~~ 866 (914)
++..
T Consensus 141 a~~~ 144 (211)
T PRK14879 141 AEFS 144 (211)
T ss_pred ccCC
Confidence 9753
No 440
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.67 E-value=4.3e-16 Score=182.27 Aligned_cols=138 Identities=24% Similarity=0.317 Sum_probs=108.6
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CC------cchHHHHHHHHHHHhcCCCCcceEEeEeecCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QK------GASKSFVSECEALRNIRHRNLIKIITICSSTD 775 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 775 (914)
...|...+.||+|+||+||+|++.... +++|+...+ .. ...+++.+|++++++++|++++....++...
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~- 408 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP- 408 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC-
Confidence 344566789999999999999986443 334432211 11 1235688999999999999998877665432
Q ss_pred CCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcE
Q 042766 776 FEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVA 855 (914)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 855 (914)
...++||||++|++|.+++. ....++.|+++++.|+|+. +|+|||+||+||++ .++.+
T Consensus 409 ----~~~~lv~E~~~g~~L~~~l~--------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~ 466 (535)
T PRK09605 409 ----EEKTIVMEYIGGKDLKDVLE--------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRL 466 (535)
T ss_pred ----CCCEEEEEecCCCcHHHHHH--------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcE
Confidence 24679999999999999875 2456899999999999999 99999999999999 57799
Q ss_pred EEecccccccc
Q 042766 856 HVGDFGLAKFL 866 (914)
Q Consensus 856 ki~DFGla~~~ 866 (914)
+|+|||+|+..
T Consensus 467 ~liDFGla~~~ 477 (535)
T PRK09605 467 YLIDFGLGKYS 477 (535)
T ss_pred EEEeCcccccC
Confidence 99999999864
No 441
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.66 E-value=3.8e-17 Score=189.68 Aligned_cols=187 Identities=21% Similarity=0.263 Sum_probs=141.8
Q ss_pred cccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcc----hHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 708 SSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGA----SKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 708 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
...+.+|.|++|.|+.+......+..+.|.++.. .... ...+..|+.+-..+.|||++.....+... ..
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~-----~~ 395 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI-----DG 395 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc-----cc
Confidence 3457899999998888887766666666655321 1111 12255677778888999988766653322 12
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
..-+||||++ +|..++... ..+...++-.+..|++.|++|+|+. ||.|||+|++|++++.+|.+||+|||
T Consensus 396 ~~~~mE~~~~-Dlf~~~~~~------~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg 465 (601)
T KOG0590|consen 396 ILQSMEYCPY-DLFSLVMSN------GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFG 465 (601)
T ss_pred chhhhhcccH-HHHHHHhcc------cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecC
Confidence 2334999999 999998764 2577788889999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCccccccccc
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~ 913 (914)
.+..+.-... .......+++|+..|+|||++. ....||||-|++.+.|
T Consensus 466 ~~~vf~~~~e----~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m 518 (601)
T KOG0590|consen 466 AASVFRYPWE----KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICM 518 (601)
T ss_pred cceeeccCcc----hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEE
Confidence 9987653221 1112345789999999999994 3899999999988766
No 442
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.66 E-value=6.1e-16 Score=157.38 Aligned_cols=131 Identities=25% Similarity=0.375 Sum_probs=102.9
Q ss_pred cccCCccEEEEEEEECCCcEEEEEEEeeccCCc--------chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 712 MIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG--------ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 712 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.||+|+||.||+|.+ ++..|++|+....... ..+++.+|+++++.++|+++.....++... ...+
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP-----DNKT 73 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC-----CCCE
Confidence 489999999999986 4567889986432211 125677899999999988755444333221 2458
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||++|++|.+++.... . .++.|++.++.++|+. +++|||+||+||+++ ++.++++|||++
T Consensus 74 lv~e~~~g~~l~~~~~~~~------~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a 136 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEGN------D-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLG 136 (199)
T ss_pred EEEEEECCccHHHHHhhcH------H-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCC
Confidence 9999999999999875421 0 6889999999999999 999999999999999 889999999998
Q ss_pred ccc
Q 042766 864 KFL 866 (914)
Q Consensus 864 ~~~ 866 (914)
+..
T Consensus 137 ~~~ 139 (199)
T TIGR03724 137 KYS 139 (199)
T ss_pred cCC
Confidence 764
No 443
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.63 E-value=2.4e-17 Score=181.21 Aligned_cols=176 Identities=23% Similarity=0.245 Sum_probs=144.9
Q ss_pred cccCCccEEEEEEEE---CCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCceEeEE
Q 042766 712 MIGQGRFGTVYKGIL---GDDEMVVAVKVINLKQK--GASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGVDFKALV 785 (914)
Q Consensus 712 ~lg~G~~g~Vy~~~~---~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~lv 785 (914)
++|+|+||.|+.++- .+.+..+|+|+.++... +.......|..++..++ ||.+|++... ++.....+++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhya-----fqt~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYA-----FQTDGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeee-----eccccchhHh
Confidence 379999999987643 34677899998875432 11225566888888887 9999998766 5566688999
Q ss_pred EecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 786 FEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 786 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
++|..||++...+... ..+++.....+...++-|++++|+. +|+|||+|++||+++.+|++|+.|||+++.
T Consensus 76 ld~~rgg~lft~l~~~------~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske 146 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLSKE------VMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKE 146 (612)
T ss_pred hhhcccchhhhccccC------CchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhH
Confidence 9999999999888765 4567777888888999999999999 999999999999999999999999999987
Q ss_pred ccccccccccCCCCccccccCcccccccchhhh--hhcccCccccccccc
Q 042766 866 LSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM--LYTHIPSFSCTNVHH 913 (914)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~--~~~Di~s~g~~~~~~ 913 (914)
..+... .|||..|||||++.+ .+.|.||||.+.+||
T Consensus 147 ~v~~~~------------~cgt~eymApEI~~gh~~a~D~ws~gvl~fel 184 (612)
T KOG0603|consen 147 AVKEKI------------ACGTYEYRAPEIINGHLSAADWWSFGVLAFEL 184 (612)
T ss_pred hHhhhh------------cccchhhhhhHhhhccCCcccchhhhhhHHHH
Confidence 654321 289999999999984 899999999998886
No 444
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.60 E-value=5.2e-15 Score=148.87 Aligned_cols=136 Identities=24% Similarity=0.298 Sum_probs=97.5
Q ss_pred cCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcc--hH----------------------HHHHHHHHHHhcCCCC--
Q 042766 710 SNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA--SK----------------------SFVSECEALRNIRHRN-- 763 (914)
Q Consensus 710 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~----------------------~~~~E~~~l~~l~h~n-- 763 (914)
.+.||+|+||.||+|++. +++.||||+++...... .. ....|.+.+.++.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999987 78899999986432111 11 1135666666665443
Q ss_pred cceEEeEeecCCCCCCceEeEEEecccCCCHHH-HHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCcEecC
Q 042766 764 LIKIITICSSTDFEGVDFKALVFEYMENGSLED-WLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH-HCQPPMVHGD 841 (914)
Q Consensus 764 iv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~-~~~~~ivHrD 841 (914)
+.+.+++ ...++||||++++++.. .+... ... .++..++.+++.++.++|. . +|+|||
T Consensus 81 ~~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~~-------~~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~D 140 (187)
T cd05119 81 VPKPIDL---------NRHVLVMEFIGGDGIPAPRLKDV-------RLL-EDPEELYDQILELMRKLYREA---GLVHGD 140 (187)
T ss_pred CCceEec---------CCCEEEEEEeCCCCccChhhhhh-------hhc-ccHHHHHHHHHHHHHHHhhcc---CcCcCC
Confidence 4444432 13589999999854321 11111 001 4567899999999999999 7 999999
Q ss_pred CCCCCeeecCCCcEEEeccccccccc
Q 042766 842 LKPSNVLLDYDMVAHVGDFGLAKFLS 867 (914)
Q Consensus 842 lkp~NILl~~~~~~ki~DFGla~~~~ 867 (914)
+||+||+++ ++.++++|||.|....
T Consensus 141 l~p~Nili~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 141 LSEYNILVD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred CChhhEEEE-CCcEEEEECccccccc
Confidence 999999999 8999999999997543
No 445
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.58 E-value=9.1e-16 Score=152.77 Aligned_cols=94 Identities=22% Similarity=0.241 Sum_probs=80.7
Q ss_pred CCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccccc
Q 042766 792 GSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHL 871 (914)
Q Consensus 792 gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~ 871 (914)
|+|.+++...+ ..+++.+++.|+.|++.||+|||++ + ||+||+++.++.+|+ ||.++.....
T Consensus 1 GsL~~~l~~~~-----~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~-- 62 (176)
T smart00750 1 VSLADILEVRG-----RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPE-- 62 (176)
T ss_pred CcHHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccc--
Confidence 68999997643 4689999999999999999999998 5 999999999999999 9999865321
Q ss_pred ccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 872 DIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 872 ~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
...||+.|||||++. +.++|||||||++|||.
T Consensus 63 -----------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 98 (176)
T smart00750 63 -----------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEAL 98 (176)
T ss_pred -----------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHH
Confidence 125899999999994 58899999999999973
No 446
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.57 E-value=2.6e-15 Score=154.91 Aligned_cols=142 Identities=23% Similarity=0.280 Sum_probs=104.0
Q ss_pred CCCCcceEEeEeecCC----------------------CCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHH
Q 042766 760 RHRNLIKIITICSSTD----------------------FEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMN 817 (914)
Q Consensus 760 ~h~niv~l~~~~~~~~----------------------~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~ 817 (914)
+|||||++.+++.+.- .-.+...|+||.-++ .+|.+++... ..+.....-
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~-------~~s~r~~~~ 345 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR-------HRSYRTGRV 345 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC-------CCchHHHHH
Confidence 6999999988765431 112335789998884 5999998754 345566777
Q ss_pred HHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec--CCC--cEEEecccccccccccccccccCCCCccccccCccccccc
Q 042766 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD--YDM--VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAP 893 (914)
Q Consensus 818 i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~--~~~--~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~AP 893 (914)
+..|+++|+.|||.+ +|.|||+|++|||+. +|+ ...|+|||++-.-..+....+... .....-|-..-|||
T Consensus 346 ~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S--~~Vd~GGNa~lmAP 420 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYES--DEVDLGGNAKLMAP 420 (598)
T ss_pred HHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeecccccccccccc--ccccCCCcceecch
Confidence 899999999999999 999999999999994 444 577899998754332222221111 11233477778999
Q ss_pred chhh----------hhhcccCcccccccccC
Q 042766 894 GKFF----------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 894 E~~~----------~~~~Di~s~g~~~~~~f 914 (914)
|++. -.++|.|+.|...||.|
T Consensus 421 Ei~ta~PGp~avvny~kAD~WA~GalaYEIf 451 (598)
T KOG4158|consen 421 EIATAVPGPNAVVNYEKADTWAAGALAYEIF 451 (598)
T ss_pred hhhhcCCCCceeeccchhhhhhhhhhHHHHh
Confidence 9984 27899999999999987
No 447
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.56 E-value=2.7e-14 Score=138.13 Aligned_cols=135 Identities=22% Similarity=0.289 Sum_probs=109.6
Q ss_pred ccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCC--CCcceEEeEeecCCCCCCceEeEEE
Q 042766 709 SSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRH--RNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 709 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.+.||+|.++.||+++..+ ..+++|....... ...+.+|+.+++.++| ..+++++++.. ..+..+++|
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~-----~~~~~~~v~ 72 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGE-----SDGWSYLLM 72 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcC-----CCCccEEEE
Confidence 34679999999999999854 6789998854332 4678899999999976 48888887743 335689999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
||++++.+..+ +......++.+++++++++|....++++|+|+||+||+++.++.++++|||.++.
T Consensus 73 e~~~g~~~~~~-------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 73 EWIEGETLDEV-------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EecCCeecccC-------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 99988776543 3345667889999999999986445799999999999999989999999999874
No 448
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.56 E-value=4.8e-16 Score=152.29 Aligned_cols=180 Identities=22% Similarity=0.365 Sum_probs=139.5
Q ss_pred ccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 709 SSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 709 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
...+|.+...|+.|+|++.+. .+++|++...+ ....++|..|.-.++-+.||||+.++|.|.++. ...++.
T Consensus 194 l~tkl~e~hsgelwrgrwqgn--divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnspp-----nlv~is 266 (448)
T KOG0195|consen 194 LITKLAESHSGELWRGRWQGN--DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPP-----NLVIIS 266 (448)
T ss_pred hhhhhccCCCcccccccccCc--chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCC-----CceEee
Confidence 345688899999999999754 35667776443 345578999999999999999999999986654 678999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
.||+.|+|+..+++... ..++..++++++.++++|++|||+. +|-|-.--+.+..++||++.+++|+ .+-+++-
T Consensus 267 q~mp~gslynvlhe~t~----vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltaris-mad~kfs 340 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTS----VVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARIS-MADTKFS 340 (448)
T ss_pred eeccchHHHHHHhcCcc----EEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhhee-cccceee
Confidence 99999999999987643 4577789999999999999999997 4445555788999999999988874 1111110
Q ss_pred cccccccccCCCCccccccCcccccccchhhh-------hhcccCccccccccc
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM-------LYTHIPSFSCTNVHH 913 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~-------~~~Di~s~g~~~~~~ 913 (914)
- ...+..-.|.||+||.++. .++|+|||.+.+.|+
T Consensus 341 f------------qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel 382 (448)
T KOG0195|consen 341 F------------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWEL 382 (448)
T ss_pred e------------eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHh
Confidence 0 0112345789999999963 789999999887664
No 449
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.55 E-value=4.8e-14 Score=146.40 Aligned_cols=140 Identities=18% Similarity=0.137 Sum_probs=105.4
Q ss_pred Cccc-CCccEEEEEEEECCCcEEEEEEEeeccC-------------CcchHHHHHHHHHHHhcCCCCc--ceEEeEeecC
Q 042766 711 NMIG-QGRFGTVYKGILGDDEMVVAVKVINLKQ-------------KGASKSFVSECEALRNIRHRNL--IKIITICSST 774 (914)
Q Consensus 711 ~~lg-~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 774 (914)
..|| .|+.|+||+++.. +..+|+|.+.... .....++.+|++++++++|++| ++.+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 5677 8888999998874 5678999885311 1223568899999999998875 6666654322
Q ss_pred CCCCCceEeEEEecccC-CCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC
Q 042766 775 DFEGVDFKALVFEYMEN-GSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM 853 (914)
Q Consensus 775 ~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~ 853 (914)
. ......++||||++| .+|.+++... .++.. .+.+++.++.++|+. ||+||||||+|||++.++
T Consensus 115 ~-~~~~~~~lV~e~l~G~~~L~~~l~~~-------~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~ 179 (239)
T PRK01723 115 H-GLFYRADILIERIEGARDLVALLQEA-------PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDG 179 (239)
T ss_pred c-CcceeeeEEEEecCCCCCHHHHHhcC-------CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCC
Confidence 1 111234699999997 6999988642 23333 356899999999999 999999999999999999
Q ss_pred cEEEeccccccccc
Q 042766 854 VAHVGDFGLAKFLS 867 (914)
Q Consensus 854 ~~ki~DFGla~~~~ 867 (914)
.++|+|||.++...
T Consensus 180 ~v~LIDfg~~~~~~ 193 (239)
T PRK01723 180 KFWLIDFDRGELRT 193 (239)
T ss_pred CEEEEECCCcccCC
Confidence 99999999987643
No 450
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.53 E-value=6.6e-15 Score=153.14 Aligned_cols=191 Identities=21% Similarity=0.270 Sum_probs=120.5
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC---cchHHHHHHHHHHHhcCC----------CCcceEEeEee
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNIRH----------RNLIKIITICS 772 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h----------~niv~l~~~~~ 772 (914)
.+...+.||.|+++.||++++.++++.+|+|++..... ...+++.+|.-....+.+ -.++.-++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 45567899999999999999999999999999964432 233556666544443222 11222222211
Q ss_pred cCC----CCCC---c-----eEeEEEecccCCCHHHHHhc---cCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 042766 773 STD----FEGV---D-----FKALVFEYMENGSLEDWLHQ---SNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPM 837 (914)
Q Consensus 773 ~~~----~~~~---~-----~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~i 837 (914)
... ++.. . ..+++|+-+ -+||.+++.. .... ........++.+..|+++.++++|+. |+
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~--~~~l~~~arl~lT~Q~I~lvA~Lh~~---Gl 166 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQT--HSPLAFAARLSLTVQMIRLVANLHSY---GL 166 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTT--SHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccc--cchhHHHHHHHHHHHHHHHHHHHhhc---ce
Confidence 100 0000 1 125677777 4688887652 2110 12344555677789999999999999 99
Q ss_pred EecCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchh------------hhhhcccCc
Q 042766 838 VHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF------------FMLYTHIPS 905 (914)
Q Consensus 838 vHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~------------~~~~~Di~s 905 (914)
||+||||+|++++.+|.++++||+......+... ....+..|.+||.. ++.+.|.|+
T Consensus 167 VHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~-----------~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~ 235 (288)
T PF14531_consen 167 VHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYR-----------CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQ 235 (288)
T ss_dssp EEST-SGGGEEE-TTS-EEE--GGGEEETTEEEE-----------GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHH
T ss_pred EecccceeeEEEcCCCCEEEcChHHHeecCceee-----------ccCCCcccCChhhhhhhcccCcccceeeeccCHHH
Confidence 9999999999999999999999997765432111 02345779999877 357889999
Q ss_pred cccccccc
Q 042766 906 FSCTNVHH 913 (914)
Q Consensus 906 ~g~~~~~~ 913 (914)
+|+++|.+
T Consensus 236 LG~~ly~l 243 (288)
T PF14531_consen 236 LGITLYSL 243 (288)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
No 451
>PLN03150 hypothetical protein; Provisional
Probab=99.52 E-value=2.1e-14 Score=169.63 Aligned_cols=118 Identities=32% Similarity=0.509 Sum_probs=99.0
Q ss_pred cceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCC
Q 042766 519 NLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLS 598 (914)
Q Consensus 519 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 598 (914)
.++.|+|++|.++|.+|..++.+++|+.|+|++|.++|.+|..++.+++|+.|||++|+++|.+|+.+..+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 36788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCC--CcCCCCCccCccCCCCCCCCccCCCCCCCC
Q 042766 599 YNYFEGEVPVK--GVFSNKTKISLHGNVKLCGGIDELHLPSCP 639 (914)
Q Consensus 599 ~N~l~~~~p~~--~~~~~~~~~~~~~n~~lc~~~~~l~~~~c~ 639 (914)
+|+++|.+|.. .....+..+.+.+|+.+|+.+ . .+.|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p-~--l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP-G--LRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC-C--CCCCc
Confidence 99999998864 122344567889999999852 3 24675
No 452
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.52 E-value=1.2e-14 Score=171.66 Aligned_cols=188 Identities=21% Similarity=0.244 Sum_probs=134.9
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC---CCCcceEEeEeecCCCCC
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR---HRNLIKIITICSSTDFEG 778 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~ 778 (914)
.....|.+.+.||+|+||+||+|...+ |+.||+|+-+.... .+|.-=.+++.+++ -+.|+++...+. +.
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~---~~- 766 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHV---FQ- 766 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHc---cC-
Confidence 344578899999999999999999986 99999998754332 22222223344444 122333322211 22
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC-------
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY------- 851 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~------- 851 (914)
+..++|+||.+.|+|.+++... ..+++..++.++.|++..++.||.. +|||+||||+|.|+..
T Consensus 767 -~~S~lv~ey~~~Gtlld~~N~~------~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~ 836 (974)
T KOG1166|consen 767 -NASVLVSEYSPYGTLLDLINTN------KVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSD 836 (974)
T ss_pred -CcceeeeeccccccHHHhhccC------CCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCc
Confidence 3457999999999999999844 5689999999999999999999999 9999999999999942
Q ss_pred CCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 852 DMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 852 ~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
...++|+|||.+--+.-- .....-.+.++|-.+-.+|+.. .+.+|-+.++-|++-|
T Consensus 837 ~~~l~lIDfG~siDm~lf------p~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~m 896 (974)
T KOG1166|consen 837 SKGLYLIDFGRSIDMKLF------PDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVM 896 (974)
T ss_pred ccceEEEecccceeeeEc------CCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHH
Confidence 246899999988543210 0111234567888999999985 4777777766665543
No 453
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.51 E-value=2.5e-15 Score=173.10 Aligned_cols=187 Identities=23% Similarity=0.262 Sum_probs=136.6
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHH--HHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEA--LRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++...+.+|++.|=+|.+|+++ .|. |+||++-..+ .-..+.+.++++- ..-++|||.+.+..+ .......
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~-----~~t~kAA 96 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKV-----LVTDKAA 96 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHH-----HHhhHHH
Confidence 6777789999999999999997 454 8899986554 3333444444333 555689999987654 3334456
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
|+|=+|.. -+|+|.+..+ .-+...+.+-|+.|++.|+.-+|.. +|+|+|||.|||||+.=.-+.|+||.-
T Consensus 97 ylvRqyvk-hnLyDRlSTR------PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAs 166 (1431)
T KOG1240|consen 97 YLVRQYVK-HNLYDRLSTR------PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFAS 166 (1431)
T ss_pred HHHHHHHh-hhhhhhhccc------hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccc
Confidence 77888884 4899988765 3567778888999999999999999 999999999999999888899999974
Q ss_pred cccccccccccccCCCCcccccc----Ccccccccchhh---------------hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIK----GTVGYVAPGKFF---------------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~----GT~~y~APE~~~---------------~~~~Di~s~g~~~~~~f 914 (914)
-+.. ..+...+..-..+. .-.-|+|||.|. .++-||+|.||++.|+|
T Consensus 167 FKPt-----YLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf 232 (1431)
T KOG1240|consen 167 FKPT-----YLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELF 232 (1431)
T ss_pred cCCc-----cCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHH
Confidence 4321 11122222211111 223499999994 26789999999999986
No 454
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.48 E-value=3.3e-15 Score=161.04 Aligned_cols=177 Identities=26% Similarity=0.438 Sum_probs=141.1
Q ss_pred CCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccce
Q 042766 122 GNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEV 201 (914)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 201 (914)
..|+.-...||+.|++. ++|..+..+-.|+.+.|.+|.+. .+|..+++|..|++|||+.|+++ .+|..++.|+ |+.
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 45666678888888888 88888888888888888888887 78888888888888888888888 7888787776 888
Q ss_pred eecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCcc
Q 042766 202 IRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNN 281 (914)
Q Consensus 202 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~ 281 (914)
|-+++|+++ .+|..++.+..|..||.+.|.+. .+|..++++.+|+.|.+..|++.. +|.++. .| .|..||+|.|+
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~-lp~El~-~L-pLi~lDfScNk 222 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLED-LPEELC-SL-PLIRLDFSCNK 222 (722)
T ss_pred EEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhh-CCHHHh-CC-ceeeeecccCc
Confidence 888888888 77888888888888888888888 677788888888888888888874 455543 23 46777777777
Q ss_pred CCCCCCCccccccccccccccCccCCc
Q 042766 282 FVGSIPDSLSNASNLELLDLPSNQFKG 308 (914)
Q Consensus 282 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 308 (914)
+. .+|-.|.+|+.|++|-|.+|.+..
T Consensus 223 is-~iPv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 223 IS-YLPVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred ee-ecchhhhhhhhheeeeeccCCCCC
Confidence 77 677777777777777777777763
No 455
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.47 E-value=3.9e-15 Score=160.50 Aligned_cols=172 Identities=34% Similarity=0.551 Sum_probs=96.3
Q ss_pred CCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccC
Q 042766 398 NLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIAS 477 (914)
Q Consensus 398 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 477 (914)
.-...||+.|++. .+|..+..+..|+.+.|+.|.+. .+|..++++..|++|||+.|+++ .+|..++.|+ |+.|.++
T Consensus 76 dt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~s 151 (722)
T KOG0532|consen 76 DTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVS 151 (722)
T ss_pred chhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEe
Confidence 3344555555555 55555555555555556555555 45555555555666666666555 4455454443 4555555
Q ss_pred CCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeeccccccc
Q 042766 478 YNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGV 557 (914)
Q Consensus 478 ~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 557 (914)
+|+++ .+|..++...++ ..||.+.|.+. .+|..++++.+|+.|++..|++.. .|..+. .-.|..||+|+|+++ .
T Consensus 152 NNkl~-~lp~~ig~~~tl-~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~-lp~El~-~LpLi~lDfScNkis-~ 225 (722)
T KOG0532|consen 152 NNKLT-SLPEEIGLLPTL-AHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLED-LPEELC-SLPLIRLDFSCNKIS-Y 225 (722)
T ss_pred cCccc-cCCcccccchhH-HHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhh-CCHHHh-CCceeeeecccCcee-e
Confidence 55555 555555533333 45555555555 455556666666666666666653 344444 334556666666665 5
Q ss_pred CCcchhccCCCCEEEccCCccc
Q 042766 558 IPLSFRFLKSIKALNVSSNNLS 579 (914)
Q Consensus 558 ~p~~~~~l~~L~~L~Ls~N~l~ 579 (914)
+|..|..|+.|++|-|.+|.|.
T Consensus 226 iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 226 LPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred cchhhhhhhhheeeeeccCCCC
Confidence 5666666666666666666665
No 456
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.46 E-value=1.3e-14 Score=167.46 Aligned_cols=159 Identities=26% Similarity=0.364 Sum_probs=110.8
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
..++|..++.|..|+||.||.++|+.+.+.+|+|+=+ +.. +++ ||..+-+ ..
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~l-----------ilR-----nilt~a~-----------np 132 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QNL-----------ILR-----NILTFAG-----------NP 132 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhcccc-cch-----------hhh-----ccccccC-----------Cc
Confidence 3468889999999999999999999999999995421 110 111 2333221 12
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
+.| ||=...++..+ +++. +++.+++|+|+. +|+|||+||+|.+|+.=|++|++|||+
T Consensus 133 fvv------gDc~tllk~~g------~lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgL 189 (1205)
T KOG0606|consen 133 FVV------GDCATLLKNIG------PLPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGL 189 (1205)
T ss_pred cee------chhhhhcccCC------CCcc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhh
Confidence 223 34344444322 1221 237889999999 999999999999999999999999999
Q ss_pred cccccc--------cccccccCCCCccccccCcccccccchh----hhhhcccCccccccccc
Q 042766 863 AKFLSN--------HHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 863 a~~~~~--------~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~ 913 (914)
.+.--. .+.. .....-...+.+|||.|+|||++ ||..+|.|++|++.||+
T Consensus 190 sk~GLms~atnl~eg~I~-k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeF 251 (1205)
T KOG0606|consen 190 SKKGLMSLATNLKEGHIE-KDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEF 251 (1205)
T ss_pred hhhhhhhccchhhhcchH-HHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHH
Confidence 875211 1111 11111123467999999999999 57999999999999985
No 457
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.45 E-value=9.4e-14 Score=157.26 Aligned_cols=198 Identities=28% Similarity=0.461 Sum_probs=107.6
Q ss_pred EEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccC-CcchhccCCCcccCCCChhccccccccccccccc
Q 042766 105 YINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCS-NLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDIN 183 (914)
Q Consensus 105 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 183 (914)
.++++.|.+... +..+..++.++.|++.+|.++ .+|.....++ +|+.|++++|++. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 355555555322 223344455555666655555 5555555553 5666666666555 44455555566666666666
Q ss_pred cccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccc
Q 042766 184 YLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPF 263 (914)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 263 (914)
+++ .+|...+.++.|+.|++++|+++ .+|...+.+..|++|++++|++. ..+..+.++.++..+.+.+|++... .
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~--~ 248 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDL--P 248 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeec--c
Confidence 655 44544445555666666666655 44544444555666666666433 3444555555666666666655431 1
Q ss_pred cccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccc
Q 042766 264 DILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSI 312 (914)
Q Consensus 264 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 312 (914)
....++++++.|++++|+++. ++. ++.+.+++.||+++|.+....+.
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred chhccccccceeccccccccc-ccc-ccccCccCEEeccCccccccchh
Confidence 233355566666666666653 222 66666666666666666655443
No 458
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.43 E-value=1.5e-14 Score=156.40 Aligned_cols=122 Identities=26% Similarity=0.425 Sum_probs=100.3
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
+.||.|++|+-.+|.+|+.+.+. ...-++.....++.|++.|+.| + +.+|||+||.||+...+..+||.||
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~---~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDF 400 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT---GEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDF 400 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc---ccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhh
Confidence 57899999999999999975543 2456778889999999999999 5 8999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchh----hhhhcccCccccccccc
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~ 913 (914)
|+.......... .......+...||..||+||++ ++.++||||+|.+++|+
T Consensus 401 gl~ts~~~~~~~--~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL 455 (516)
T KOG1033|consen 401 GLVTSQDKDETV--APAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAEL 455 (516)
T ss_pred hheeecccCCcc--cchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHH
Confidence 999866543311 1112234456899999999999 46999999999998875
No 459
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.41 E-value=1.7e-13 Score=155.11 Aligned_cols=196 Identities=33% Similarity=0.452 Sum_probs=136.2
Q ss_pred CeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccc-cccccccccccccCcCCcccccccccceeeccc
Q 042766 128 EKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLL-KLQRLSVDINYLTGQLPDSVGNLSAIEVIRITE 206 (914)
Q Consensus 128 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 206 (914)
..|+++.|.+. ..+..+..++.++.|++.+|.++ .+|...+.+. +|++|++++|++. .+|..++.+++|+.|++++
T Consensus 96 ~~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 96 PSLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred ceeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 35777777764 23344555677777788877777 6677676664 7888888888777 6666677777888888888
Q ss_pred CCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCC
Q 042766 207 NSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSI 286 (914)
Q Consensus 207 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~ 286 (914)
|+++ .+|...+.++.|+.|++++|+++ .+|........|++|.+++|.+... + ....++.++..|.+++|++. ..
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~-~-~~~~~~~~l~~l~l~~n~~~-~~ 247 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSIIEL-L-SSLSNLKNLSGLELSNNKLE-DL 247 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcceec-c-hhhhhcccccccccCCceee-ec
Confidence 8777 55665557777777888888777 5565555666677777777743211 2 22346677777777777776 33
Q ss_pred CCccccccccccccccCccCCccccccccccccccceeccCCcCCCC
Q 042766 287 PDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTG 333 (914)
Q Consensus 287 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 333 (914)
+..++.+++++.|++++|+++.+.. +..+.+++.|++++|.+...
T Consensus 248 ~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~ 292 (394)
T COG4886 248 PESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNA 292 (394)
T ss_pred cchhccccccceecccccccccccc--ccccCccCEEeccCcccccc
Confidence 6677777778888888887775554 77777778888877777655
No 460
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.39 E-value=1.3e-12 Score=147.46 Aligned_cols=143 Identities=20% Similarity=0.236 Sum_probs=99.0
Q ss_pred cCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcc----------------------------------------hHHH
Q 042766 710 SNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA----------------------------------------SKSF 749 (914)
Q Consensus 710 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~ 749 (914)
.+.||.|++|.||+|+.+ +|+.||||+.++.-... .-++
T Consensus 122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 367999999999999986 68899999986431000 0124
Q ss_pred HHHHHHHHhcC----CCCcceEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHH-
Q 042766 750 VSECEALRNIR----HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS- 824 (914)
Q Consensus 750 ~~E~~~l~~l~----h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~- 824 (914)
.+|++.+.+++ |.+-+.+-.++... ....++||||++|+++.++..... ... ...+++.+++.
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~----~~~~vLvmE~i~G~~L~~~~~~~~-----~~~---~~~~ia~~~~~~ 268 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDR----TSERVLTMEWIDGIPLSDIAALDE-----AGL---DRKALAENLARS 268 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhh----cCCceEEEEeECCcccccHHHHHh-----cCC---CHHHHHHHHHHH
Confidence 55666665552 32223322232211 124689999999999988765321 112 23446666665
Q ss_pred HHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccccc
Q 042766 825 AIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868 (914)
Q Consensus 825 gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~ 868 (914)
.+..+|.. |++|+|+||.||+++.++.++++|||++..+..
T Consensus 269 ~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 269 FLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 46778888 999999999999999999999999999987654
No 461
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.35 E-value=2.6e-12 Score=146.38 Aligned_cols=148 Identities=18% Similarity=0.243 Sum_probs=95.7
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc----------------------------------chH--
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG----------------------------------ASK-- 747 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----------------------------------~~~-- 747 (914)
..+|+. +.||+|++|+||+|+.+++|+.||||+.++.-.. ..+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 445666 7899999999999999987999999999743100 011
Q ss_pred ----HHHHHHHHHHhcC----CCCcceEEeEeecCCCCCCceEeEEEecccCCCHHHHH--hccCCcccccCCCHHHHHH
Q 042766 748 ----SFVSECEALRNIR----HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWL--HQSNDQVEVRKLSLIQRMN 817 (914)
Q Consensus 748 ----~~~~E~~~l~~l~----h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l--~~~~~~~~~~~~~~~~~~~ 817 (914)
++.+|+..+.+++ +...+.+-.++.+. ....++||||++|+.+.++- ...+. ....+....+..
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~----st~~VLvmE~i~G~~l~d~~~l~~~g~--d~~~la~~~v~~ 271 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDY----CSETVMVMERMYGIPVSDVAALRAAGT--DMKLLAERGVEV 271 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeeccc----CCCceEEEeeecCccHHhHHHHHhcCC--CHHHHHHHHHHH
Confidence 2445555555542 33333333332211 13467999999999998753 22110 011222222333
Q ss_pred HHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC----cEEEecccccccccc
Q 042766 818 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM----VAHVGDFGLAKFLSN 868 (914)
Q Consensus 818 i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~----~~ki~DFGla~~~~~ 868 (914)
++.|+ +.. |++|+|+||.||+++.++ .+++.|||++..+..
T Consensus 272 ~~~Qi-------f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 272 FFTQV-------FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHH-------HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 33333 345 999999999999999988 999999999987754
No 462
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.35 E-value=1.3e-13 Score=160.25 Aligned_cols=191 Identities=25% Similarity=0.309 Sum_probs=148.9
Q ss_pred hcccccCcccCCccEEEEEEEEC-CCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCc
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILG-DDEMVVAVKVINLKQ--KGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~ 780 (914)
..|...+.||+|+|+.|-.+... .....+|+|.+.... ....+....|..+-..+. |+|++++++.. ....
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~-----~~~~ 94 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPS-----SSPR 94 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCcc-----CCCc
Confidence 46777788999999999887763 445667778775433 333455566888877776 99999999873 4455
Q ss_pred eEeEEEecccCCCHHHHH-hccCCcccccCCCHHHHHHHHHHHHHHHHHHH-hCCCCCcEecCCCCCCeeecCCC-cEEE
Q 042766 781 FKALVFEYMENGSLEDWL-HQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH-HHCQPPMVHGDLKPSNVLLDYDM-VAHV 857 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l-~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH-~~~~~~ivHrDlkp~NILl~~~~-~~ki 857 (914)
..++++||.+|+++.+.+ .... ...+...+..+..|+..++.|+| .. ++.|||+||+|.+++..+ ..|+
T Consensus 95 ~~~~~~~~s~g~~~f~~i~~~~~-----~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~ 166 (601)
T KOG0590|consen 95 SYLLSLSYSDGGSLFSKISHPDS-----TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKI 166 (601)
T ss_pred ccccccCcccccccccccccCCc-----cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccC
Confidence 789999999999999888 3321 24555667789999999999999 77 999999999999999999 9999
Q ss_pred ecccccccccccccccccCCCCccccccC-cccccccchhh-----hhhcccCccccccccc
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKG-TVGYVAPGKFF-----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~G-T~~y~APE~~~-----~~~~Di~s~g~~~~~~ 913 (914)
+|||+|..+... ..........+| ++.|+|||... +...|+||.|++..-|
T Consensus 167 ~df~~At~~~~~-----~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~ 223 (601)
T KOG0590|consen 167 ADFGLATAYRNK-----NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAM 223 (601)
T ss_pred CCchhhcccccc-----CCcceeeecccCCCCCCCCcccccchhhcCCCccccccccccccc
Confidence 999999876541 112223345678 99999999984 5899999999998755
No 463
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.23 E-value=3.4e-11 Score=118.94 Aligned_cols=131 Identities=18% Similarity=0.161 Sum_probs=95.5
Q ss_pred cCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcc-eEEeEeecCCCCCCceEeEEEec
Q 042766 710 SNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLI-KIITICSSTDFEGVDFKALVFEY 788 (914)
Q Consensus 710 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~~~~~~lv~e~ 788 (914)
.+.++.|.++.||+++.. +..|++|+...... ....+.+|+++++.+.+.+++ +++.+.. ...++||||
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~-------~~~~lv~e~ 72 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP-------ETGVLITEF 72 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC-------CCCeEEEEe
Confidence 356899999999999875 67899998753322 233567899999998765544 4544321 124799999
Q ss_pred ccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCC--CCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 789 MENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHC--QPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 789 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~--~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
++|.++.+. . . ....++.+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.|..
T Consensus 73 i~G~~l~~~-~----------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 73 IEGSELLTE-D----------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cCCCccccc-c----------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 999887643 0 0 11235678999999999982 12359999999999999 66899999999874
No 464
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.21 E-value=7.8e-12 Score=138.60 Aligned_cols=140 Identities=29% Similarity=0.427 Sum_probs=112.4
Q ss_pred HHhcCCCCcceEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCC
Q 042766 756 LRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQP 835 (914)
Q Consensus 756 l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~ 835 (914)
|+.+.|.|+.+++|.+... ...++|.+||+.|+|.+.+.... ..+++.-...+++++++|++|+|..
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~~~-----~~~d~~F~~s~~rdi~~Gl~ylh~s--- 67 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSNED-----IKLDYFFILSFIRDISKGLAYLHNS--- 67 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhccc-----cCccHHHHHHHHHHHHHHHHHHhcC---
Confidence 3578899999999998654 36789999999999999998743 6788999999999999999999987
Q ss_pred Cc-EecCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh-----------hhhccc
Q 042766 836 PM-VHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----------MLYTHI 903 (914)
Q Consensus 836 ~i-vHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----------~~~~Di 903 (914)
+| .|+.+++.|.++|..+.+|++|||+.....+.. .... .....-..-|.|||.+. +.+.|+
T Consensus 68 ~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~-~~~~-----~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdi 141 (484)
T KOG1023|consen 68 PIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETA-EPEA-----HHPIRKALLWTAPELLRGALSQSLESALTQKGDI 141 (484)
T ss_pred cceeeeeeccccceeeeeEEEEechhhhcccccccc-cccc-----cchhHHHHhccCHHHhcccccccccccccccCCe
Confidence 45 999999999999999999999999988764300 0000 01112334599999984 356899
Q ss_pred CcccccccccC
Q 042766 904 PSFSCTNVHHF 914 (914)
Q Consensus 904 ~s~g~~~~~~f 914 (914)
||||++++|++
T Consensus 142 Ys~~ii~~ei~ 152 (484)
T KOG1023|consen 142 YSFGIIMYEIL 152 (484)
T ss_pred ehHHHHHHHHH
Confidence 99999998863
No 465
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.21 E-value=2.2e-10 Score=113.40 Aligned_cols=136 Identities=20% Similarity=0.204 Sum_probs=97.7
Q ss_pred CcccCCccEEEEEEEECC------CcEEEEEEEeeccC-------------C---------cchHHH----HHHHHHHHh
Q 042766 711 NMIGQGRFGTVYKGILGD------DEMVVAVKVINLKQ-------------K---------GASKSF----VSECEALRN 758 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~------~~~~vavK~~~~~~-------------~---------~~~~~~----~~E~~~l~~ 758 (914)
..||.|--+.||.|...+ .+..+|||+.+... . ...+.+ .+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 578999999999998653 35789999986311 0 012233 389999999
Q ss_pred cCC--CCcceEEeEeecCCCCCCceEeEEEecccCCCHHH-HHhccCCcccccCCCHHHHHHHHHHHHHHHHHH-HhCCC
Q 042766 759 IRH--RNLIKIITICSSTDFEGVDFKALVFEYMENGSLED-WLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYL-HHHCQ 834 (914)
Q Consensus 759 l~h--~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~L-H~~~~ 834 (914)
+.. -++.+.+++ ...++||||+.+..+.. .+++ ..++..+...+..+++.++.++ |..
T Consensus 83 l~~~Gv~vP~pi~~---------~~~~lvME~Ig~~~~~~~~Lkd-------~~~~~~~~~~i~~~i~~~l~~l~H~~-- 144 (197)
T cd05146 83 MQKAGIPCPEVVVL---------KKHVLVMSFIGDDQVPAPKLKD-------AKLNDEEMKNAYYQVLSMMKQLYKEC-- 144 (197)
T ss_pred HHHcCCCCCeEEEe---------cCCEEEEEEcCCCCccchhhhc-------cccCHHHHHHHHHHHHHHHHHHHHhC--
Confidence 864 456666654 23579999997654321 2221 1234455667889999999999 777
Q ss_pred CCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 835 PPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 835 ~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
+|||+|+++.||+++ ++.+.|+|||.|-..
T Consensus 145 -glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 145 -NLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred -CeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 999999999999997 468999999988643
No 466
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.18 E-value=3e-12 Score=134.63 Aligned_cols=210 Identities=20% Similarity=0.199 Sum_probs=120.4
Q ss_pred CCCCCCCeeecCCCCCCCcCC--CCccccCCcchhccCCCcccCCCC--hhccccccccccccccccccCcCCcc-cccc
Q 042766 122 GNLFRLEKLALSNNSFSGTIP--TNLSRCSNLIHFCASNNKLEGQIP--KEIGNLLKLQRLSVDINYLTGQLPDS-VGNL 196 (914)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~p--~~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l 196 (914)
.++.+|+...|.+.... ..+ .....+++++.||||+|-|....| .-...|++|+.|+|+.|++.-..... -..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 46777888888777765 333 356678888888888887764322 22446788888888888876322221 2356
Q ss_pred cccceeecccCCCCCCC-CccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCccccee
Q 042766 197 SAIEVIRITENSLGGKI-PTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKL 275 (914)
Q Consensus 197 ~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L 275 (914)
++|+.|.|+.|.|+... -......++|+.|+|+.|...+........+..|+.|||++|++-..-.......++.|..|
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 67777788877776322 22234567777777777754434444555566677777777766533212233356666666
Q ss_pred eccCccCCCC-CCCc-----cccccccccccccCccCCcccc-ccccccccccceeccCCcCCC
Q 042766 276 GIGGNNFVGS-IPDS-----LSNASNLELLDLPSNQFKGKVS-IDFSSLKNLWLLNLEQNNLGT 332 (914)
Q Consensus 276 ~Ls~N~l~~~-~p~~-----~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~ 332 (914)
+++.+.+..+ .|+. ...+++|++|+++.|+|..... ..+..+++|+.|....|.++.
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 6666665532 1222 2344556666666665532111 122334444444444454443
No 467
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.17 E-value=5.7e-12 Score=142.78 Aligned_cols=248 Identities=25% Similarity=0.304 Sum_probs=155.7
Q ss_pred CCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccccccccc
Q 042766 99 NLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRL 178 (914)
Q Consensus 99 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 178 (914)
.+..+..+++..|.+. .+-..+..+++|+.|+|.+|+|. .+...+..+++|++|+||+|+|+.. ..+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhh-hhhcccccccceeeeeccccchh-hcccchhhhhcchheeccccccccc--cchhhccchhhh
Confidence 4566667777777777 34445777778888888888887 4444477788888888888888743 234556668888
Q ss_pred ccccccccCcCCcccccccccceeecccCCCCCCCC-ccchhhhcccccccccccccCCCCCccccccccceeeccCCcc
Q 042766 179 SVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIP-TTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRF 257 (914)
Q Consensus 179 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 257 (914)
++++|.++ .++ .+..+..|+.+++++|.+...-+ . ...+.+++.+++++|.+.. ...+..+..+..+++..|.+
T Consensus 146 ~l~~N~i~-~~~-~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i 220 (414)
T KOG0531|consen 146 NLSGNLIS-DIS-GLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKI 220 (414)
T ss_pred eeccCcch-hcc-CCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccc
Confidence 88888877 322 34457778888888887774433 2 4667778888888887763 23344455555567777777
Q ss_pred cCcccccccccCcc--cceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCC
Q 042766 258 SGIFPFDILLNLPN--LKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTA 335 (914)
Q Consensus 258 ~~~~p~~~~~~l~~--L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 335 (914)
+..-+.. .+.. |+.+++++|.+. ..+..+..+..+..||+++|++..... +.....+..+.+..|.+.....
T Consensus 221 ~~~~~l~---~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 294 (414)
T KOG0531|consen 221 SKLEGLN---ELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLEG--LERLPKLSELWLNDNKLALSEA 294 (414)
T ss_pred eeccCcc---cchhHHHHHHhcccCccc-cccccccccccccccchhhcccccccc--ccccchHHHhccCcchhcchhh
Confidence 6442211 2233 777788888776 334566677777888888887764332 4455666666677766653321
Q ss_pred CCcchhhcccCCCCCcEEeccccccCCC
Q 042766 336 NDLDFVIFLSNCSSLKVLSLSDNQFGGE 363 (914)
Q Consensus 336 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 363 (914)
.. ........+.++...+..|.+...
T Consensus 295 ~~--~~~~~~~~~~~~~~~~~~~~~~~~ 320 (414)
T KOG0531|consen 295 IS--QEYITSAAPTLVTLTLELNPIRKI 320 (414)
T ss_pred hh--ccccccccccccccccccCccccc
Confidence 11 001134455666666666665543
No 468
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.16 E-value=5.5e-12 Score=125.93 Aligned_cols=206 Identities=20% Similarity=0.227 Sum_probs=123.3
Q ss_pred CcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccccccccccccc-ccccCcCCcccccc
Q 042766 118 PQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDI-NYLTGQLPDSVGNL 196 (914)
Q Consensus 118 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l 196 (914)
|-.+.-+++|..+.+|++.-. .|-.-...-+.|+++...+..++ ..|. +-....+..+.-+. .-.+|..-..+...
T Consensus 207 ~f~l~~f~~l~~~~~s~~~~~-~i~~~~~~kptl~t~~v~~s~~~-~~~~-l~pe~~~~D~~~~E~~t~~G~~~~~~dTW 283 (490)
T KOG1259|consen 207 SFNLNAFRNLKTLKFSALSTE-NIVDIELLKPTLQTICVHNTTIQ-DVPS-LLPETILADPSGSEPSTSNGSALVSADTW 283 (490)
T ss_pred ccchHHhhhhheeeeeccchh-heeceeecCchhheeeeeccccc-cccc-ccchhhhcCccCCCCCccCCceEEecchH
Confidence 333444555666666654322 11111122345666665554443 2221 11112222222111 12234444445556
Q ss_pred cccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceee
Q 042766 197 SAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLG 276 (914)
Q Consensus 197 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~ 276 (914)
..|+.+|||+|.++ .+.++..-+++++.|++|+|.|... ..+..+++|+.||||+|.++... ++-.++-|++.|.
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~~~--Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAECV--GWHLKLGNIKTLK 358 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHhhh--hhHhhhcCEeeee
Confidence 67888888888887 6677777788888888888888733 33777888888888888887542 3334778888888
Q ss_pred ccCccCCCCCCCccccccccccccccCccCCcccc-ccccccccccceeccCCcCCCC
Q 042766 277 IGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVS-IDFSSLKNLWLLNLEQNNLGTG 333 (914)
Q Consensus 277 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~ 333 (914)
|+.|.|... ..+..+-+|..||+++|+|..... ..+++++.|+++.|.+|.+...
T Consensus 359 La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 359 LAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 888888632 456777888888888888875432 3456666666666666666554
No 469
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.12 E-value=1.3e-11 Score=139.78 Aligned_cols=151 Identities=26% Similarity=0.349 Sum_probs=67.7
Q ss_pred cccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceee
Q 042766 172 LLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIF 251 (914)
Q Consensus 172 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 251 (914)
+..++.+++..|.+. .+-..+..+.+|+.|++.+|++.. +...+..+++|++|+|++|+|+... .+..+..|+.|+
T Consensus 71 l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhh-hhhcccccccceeeeeccccchhh-cccchhhhhcchheecccccccccc--chhhccchhhhe
Confidence 334444444444444 222234444555555555555542 2222445555555555555555332 233334455555
Q ss_pred ccCCcccCcccccccccCcccceeeccCccCCCCCC-CccccccccccccccCccCCccccccccccccccceeccCCcC
Q 042766 252 LTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIP-DSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNL 330 (914)
Q Consensus 252 L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 330 (914)
+++|.++.. .-+..+++|+.+++++|++...-+ . ...+.+++.+++.+|.+..+. .+..+..+..+++..|.+
T Consensus 147 l~~N~i~~~---~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~--~~~~~~~l~~~~l~~n~i 220 (414)
T KOG0531|consen 147 LSGNLISDI---SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIE--GLDLLKKLVLLSLLDNKI 220 (414)
T ss_pred eccCcchhc---cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhccc--chHHHHHHHHhhcccccc
Confidence 555555432 112234555555555555553322 1 344555555555555554222 222333333344444444
Q ss_pred CC
Q 042766 331 GT 332 (914)
Q Consensus 331 ~~ 332 (914)
+.
T Consensus 221 ~~ 222 (414)
T KOG0531|consen 221 SK 222 (414)
T ss_pred ee
Confidence 43
No 470
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.10 E-value=4.3e-11 Score=116.00 Aligned_cols=109 Identities=28% Similarity=0.384 Sum_probs=32.0
Q ss_pred CCCCCCCCEEEcCCCCCcccCCcccC-CCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhc-ccccc
Q 042766 97 VGNLSFLRYINLADNGFRGDIPQEIG-NLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEI-GNLLK 174 (914)
Q Consensus 97 l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~ 174 (914)
+.+...+++|+|++|+|+ .|. .++ .+++|+.||||+|.++ .++ .+..+++|++|++++|+++ .+++.+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred cccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 344456777777777777 343 354 4677777888877777 343 4666777777777777777 444444 35677
Q ss_pred ccccccccccccCcC-CcccccccccceeecccCCCC
Q 042766 175 LQRLSVDINYLTGQL-PDSVGNLSAIEVIRITENSLG 210 (914)
Q Consensus 175 L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~ 210 (914)
|++|+|++|+|...- -..+..+++|++|+|.+|.++
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 777777777776321 123445566666666666655
No 471
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.09 E-value=6e-11 Score=131.53 Aligned_cols=190 Identities=25% Similarity=0.275 Sum_probs=147.5
Q ss_pred cccccCcccC--CccEEEEEEEE--CCCcEEEEEEEee--ccCCcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCC
Q 042766 706 EFSSSNMIGQ--GRFGTVYKGIL--GDDEMVVAVKVIN--LKQKGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEG 778 (914)
Q Consensus 706 ~~~~~~~lg~--G~~g~Vy~~~~--~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 778 (914)
.|...+.+|+ |.+|.||.++. +.++..+|+|.-+ ........+-.+|+...++++ |++.++.+.. +++
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~-----~e~ 189 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA-----WEG 189 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc-----ccc
Confidence 4566788999 99999999999 8889999999843 333344445567888777775 9999985554 666
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHH----HHHHHHhCCCCCcEecCCCCCCeeecCC-C
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVAS----AIEYLHHHCQPPMVHGDLKPSNVLLDYD-M 853 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~----gl~~LH~~~~~~ivHrDlkp~NILl~~~-~ 853 (914)
.+..++-.|++ +.++.++..... ..++....+.+..+... |+.++|+. +++|-|+||+||+...+ .
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~~~-----~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~ 260 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHTPC-----NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWT 260 (524)
T ss_pred CCcceeeeccc-cchhHHhhhccc-----ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccc
Confidence 77889999998 578888876542 34677777888888888 99999999 99999999999999999 8
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhh---hhhcccCcccccccc
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---MLYTHIPSFSCTNVH 912 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---~~~~Di~s~g~~~~~ 912 (914)
..+.+|||+...+.+..... .........|...|+|||... +...|++++|-++.+
T Consensus 261 s~~~~df~~v~~i~~~~~~~---~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~ 319 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSS---VFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILE 319 (524)
T ss_pred eeecCCcceeEEccCCcccc---ceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHh
Confidence 89999999998877654211 111122335778899999985 589999999987654
No 472
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.08 E-value=4.6e-12 Score=129.92 Aligned_cols=244 Identities=23% Similarity=0.336 Sum_probs=145.9
Q ss_pred CceEEEecCCCCCcc----ccCCCCCCCCCCCEEEcCCC---CCcccCCcc-------cCCCCCCCeeecCCCCCCCcCC
Q 042766 77 QRLTELNLSSQRIGG----VLSPYVGNLSFLRYINLADN---GFRGDIPQE-------IGNLFRLEKLALSNNSFSGTIP 142 (914)
Q Consensus 77 ~~v~~l~l~~~~l~~----~~~~~l~~l~~L~~L~L~~n---~l~~~~p~~-------~~~l~~L~~L~Ls~N~l~~~~p 142 (914)
..++.|+|++|.+.. .+.+.+.+.++|+..++|+- ++...+|+. +...++|++||||+|-|.-.-+
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~ 109 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGI 109 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccch
Confidence 357889999988743 24455778888888888873 233355554 3456688889999988864444
Q ss_pred CC----ccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCC----CC
Q 042766 143 TN----LSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGK----IP 214 (914)
Q Consensus 143 ~~----l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~----~p 214 (914)
+. +.++.+|++|.|.+|.+.-.--..++. .|+.|. .|+. .+.-++|+++...+|++..- +-
T Consensus 110 ~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~kk-------~~~~~~Lrv~i~~rNrlen~ga~~~A 178 (382)
T KOG1909|consen 110 RGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNKK-------AASKPKLRVFICGRNRLENGGATALA 178 (382)
T ss_pred HHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHhc-------cCCCcceEEEEeeccccccccHHHHH
Confidence 43 346788888888888775221112221 233333 1221 11224566666666666522 12
Q ss_pred ccchhhhcccccccccccccC----CCCCccccccccceeeccCCcccCccc---ccccccCcccceeeccCccCCCCCC
Q 042766 215 TTLGLLRRLVNLNVAENQFSG----MFPRSICNISSVELIFLTENRFSGIFP---FDILLNLPNLKKLGIGGNNFVGSIP 287 (914)
Q Consensus 215 ~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~~l~~L~~L~Ls~N~l~~~~p 287 (914)
..|...+.|+.+.++.|.|.. .+...|..+++|+.|||.+|-++..-. ...+..+++|++|++++|.+...-.
T Consensus 179 ~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga 258 (382)
T KOG1909|consen 179 EAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGA 258 (382)
T ss_pred HHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccH
Confidence 234445566666666666541 112345667777777777776653211 2233455677788888877764322
Q ss_pred Ccc-----ccccccccccccCccCCccc----cccccccccccceeccCCcCC
Q 042766 288 DSL-----SNASNLELLDLPSNQFKGKV----SIDFSSLKNLWLLNLEQNNLG 331 (914)
Q Consensus 288 ~~~-----~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~ 331 (914)
.+| ...++|++|.|.+|.|+... .......+.|..|+|++|.+.
T Consensus 259 ~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 259 IAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 222 13578888888888886422 233455788888888888885
No 473
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.08 E-value=1.3e-12 Score=133.88 Aligned_cols=255 Identities=19% Similarity=0.237 Sum_probs=120.6
Q ss_pred cCCCCCCCCCCCEEEcCCCCCcc----cCCcccCCCCCCCeeecCCC---CCCCcCCCCc-------cccCCcchhccCC
Q 042766 93 LSPYVGNLSFLRYINLADNGFRG----DIPQEIGNLFRLEKLALSNN---SFSGTIPTNL-------SRCSNLIHFCASN 158 (914)
Q Consensus 93 ~~~~l~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~N---~l~~~~p~~l-------~~l~~L~~L~Ls~ 158 (914)
+-+.+..+..+++|+||+|.|.- .+...+.+.++|+..++|+= ++...+|+.+ ...++|++||||.
T Consensus 22 v~~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSD 101 (382)
T KOG1909|consen 22 VEEELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSD 101 (382)
T ss_pred HHHHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccc
Confidence 33456677888999999998863 34556777888888888752 2222344433 2344555555555
Q ss_pred CcccCCCChhc----cccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhccccccccccccc
Q 042766 159 NKLEGQIPKEI----GNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFS 234 (914)
Q Consensus 159 N~l~~~~p~~~----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 234 (914)
|.|.-..+..| .++..|++|+|.+|.+.-.--..++. .|..|. .|.. .+.-++|+++..++|++.
T Consensus 102 NA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~kk-------~~~~~~Lrv~i~~rNrle 170 (382)
T KOG1909|consen 102 NAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNKK-------AASKPKLRVFICGRNRLE 170 (382)
T ss_pred cccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHhc-------cCCCcceEEEEeeccccc
Confidence 55543333322 23344555555544443100001110 122221 1111 112245666666776665
Q ss_pred CCC----CCccccccccceeeccCCcccCc---ccccccccCcccceeeccCccCCCC----CCCccccccccccccccC
Q 042766 235 GMF----PRSICNISSVELIFLTENRFSGI---FPFDILLNLPNLKKLGIGGNNFVGS----IPDSLSNASNLELLDLPS 303 (914)
Q Consensus 235 ~~~----p~~~~~l~~L~~L~L~~N~l~~~---~p~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~ 303 (914)
... ...|...+.|+.+.++.|.|... .-...+..+++|++|||..|-++.. +...++.+++|+.|++++
T Consensus 171 n~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~d 250 (382)
T KOG1909|consen 171 NGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGD 250 (382)
T ss_pred cccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccc
Confidence 221 12344455666666666655311 1112233555555555555555421 223344455555555555
Q ss_pred ccCCccccccc-----cccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEecccccc
Q 042766 304 NQFKGKVSIDF-----SSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQF 360 (914)
Q Consensus 304 N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 360 (914)
+.++.....+| ...++|++|.|.+|.|+...... +.......+.|..|+|++|.+
T Consensus 251 cll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~--la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 251 CLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALA--LAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred cccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHH--HHHHHhcchhhHHhcCCcccc
Confidence 55554333222 12345555555555554332221 111223344444444444444
No 474
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.07 E-value=2.5e-11 Score=127.78 Aligned_cols=143 Identities=23% Similarity=0.242 Sum_probs=69.0
Q ss_pred hhhhcccccccccccccCCCCCc-cccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCcccccccc
Q 042766 218 GLLRRLVNLNVAENQFSGMFPRS-ICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNL 296 (914)
Q Consensus 218 ~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 296 (914)
..|++|+.|+|+.|++.....+. -..++.|+.|.|+.|.++..--.++...+|+|+.|+|..|...+........+..|
T Consensus 169 eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L 248 (505)
T KOG3207|consen 169 EQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTL 248 (505)
T ss_pred HhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHH
Confidence 34555555555555554222211 12345555555665555532222333455666666666664333334444455566
Q ss_pred ccccccCccCCcccc-ccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEecccccc
Q 042766 297 ELLDLPSNQFKGKVS-IDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQF 360 (914)
Q Consensus 297 ~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 360 (914)
+.|||++|++-.... ...+.++.|..|+++.+.+..+..-+.+...-....++|++|+++.|++
T Consensus 249 ~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I 313 (505)
T KOG3207|consen 249 QELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNI 313 (505)
T ss_pred hhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCcc
Confidence 666666666553321 2334556666666666655544322211111123344555555555544
No 475
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=2.4e-09 Score=101.72 Aligned_cols=130 Identities=27% Similarity=0.338 Sum_probs=95.1
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccCC--------cchHHHHHHHHHHHhcCCCCcc--eEEeEeecCCCCCCc
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--------GASKSFVSECEALRNIRHRNLI--KIITICSSTDFEGVD 780 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv--~l~~~~~~~~~~~~~ 780 (914)
..+++|+-+.+|.+.+. |..+++|.-.++.- -..++..+|+.++++++-..|. .++.+ +++
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv-------D~~ 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV-------DPD 72 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE-------cCC
Confidence 46889999999999774 33455664332211 1234678899999998755443 33333 123
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
...|+|||++|..|.+.+... ...++..+-.-+.-||.. +|||+|+.++||++..++ +.++||
T Consensus 73 ~~~I~me~I~G~~lkd~l~~~-------------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDf 135 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEEA-------------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDF 135 (204)
T ss_pred CCEEEEEEeCChhHHHHHHhc-------------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEEC
Confidence 467999999999999888643 134666777788899999 999999999999997775 889999
Q ss_pred cccccc
Q 042766 861 GLAKFL 866 (914)
Q Consensus 861 Gla~~~ 866 (914)
|++.+-
T Consensus 136 GLg~~s 141 (204)
T COG3642 136 GLGEFS 141 (204)
T ss_pred Cccccc
Confidence 999853
No 476
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.04 E-value=7.9e-11 Score=114.14 Aligned_cols=57 Identities=28% Similarity=0.463 Sum_probs=8.4
Q ss_pred cccccccccccccCcCCcccc-cccccceeecccCCCCCCCCccchhhhccccccccccccc
Q 042766 174 KLQRLSVDINYLTGQLPDSVG-NLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFS 234 (914)
Q Consensus 174 ~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 234 (914)
++++|+|++|.|+ .+. .++ .+.+|+.|+|++|.++.. + .+..+++|++|++++|+|+
T Consensus 20 ~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~l-~-~l~~L~~L~~L~L~~N~I~ 77 (175)
T PF14580_consen 20 KLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITKL-E-GLPGLPRLKTLDLSNNRIS 77 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---
T ss_pred ccccccccccccc-ccc-chhhhhcCCCEEECCCCCCccc-c-CccChhhhhhcccCCCCCC
Confidence 4455555555554 222 122 244444444444444421 1 2333444444444444444
No 477
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.04 E-value=2.4e-09 Score=100.86 Aligned_cols=143 Identities=23% Similarity=0.271 Sum_probs=101.5
Q ss_pred ccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--------CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 709 SSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--------KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 709 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
....+-||+-+.|+++.+. |+.+.||.-..+. .-..++..+|++.+.++.--.|....-++.+ ..
T Consensus 11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D-----~~ 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFID-----TY 83 (229)
T ss_pred cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEe-----cC
Confidence 5678899999999999984 6666676442221 1123577899999999875554332222221 22
Q ss_pred eEeEEEecccC-CCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC---cEE
Q 042766 781 FKALVFEYMEN-GSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM---VAH 856 (914)
Q Consensus 781 ~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~---~~k 856 (914)
.-.++|||++| .++.+++..... ..........++.+|-+.+.-||.+ +|||+||..+||++..++ .+.
T Consensus 84 ~~~i~ME~~~g~~~vk~~i~~~~~----~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~ 156 (229)
T KOG3087|consen 84 GGQIYMEFIDGASTVKDFILSTME----DESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPI 156 (229)
T ss_pred CCeEEEEeccchhHHHHHHHHHcc----CcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceE
Confidence 35689999977 478888765432 1222223367888899999999999 999999999999997765 468
Q ss_pred Eeccccccc
Q 042766 857 VGDFGLAKF 865 (914)
Q Consensus 857 i~DFGla~~ 865 (914)
++|||++..
T Consensus 157 lIdfgls~~ 165 (229)
T KOG3087|consen 157 LIDFGLSSV 165 (229)
T ss_pred EEeecchhc
Confidence 999999864
No 478
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.02 E-value=4.6e-11 Score=119.41 Aligned_cols=207 Identities=21% Similarity=0.233 Sum_probs=132.7
Q ss_pred CCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeeccc-CCCCCCCCccchh
Q 042766 141 IPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITE-NSLGGKIPTTLGL 219 (914)
Q Consensus 141 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~ 219 (914)
+|-.+.-..+|..+.+|++.-. .+-+-...-+.|+++.+.+..++. .|. +--...+....-+. .-.+|..-..+..
T Consensus 206 l~f~l~~f~~l~~~~~s~~~~~-~i~~~~~~kptl~t~~v~~s~~~~-~~~-l~pe~~~~D~~~~E~~t~~G~~~~~~dT 282 (490)
T KOG1259|consen 206 LSFNLNAFRNLKTLKFSALSTE-NIVDIELLKPTLQTICVHNTTIQD-VPS-LLPETILADPSGSEPSTSNGSALVSADT 282 (490)
T ss_pred cccchHHhhhhheeeeeccchh-heeceeecCchhheeeeecccccc-ccc-ccchhhhcCccCCCCCccCCceEEecch
Confidence 3445556677788888777644 222222334678888887766552 221 11112222221111 2233444445556
Q ss_pred hhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccc
Q 042766 220 LRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELL 299 (914)
Q Consensus 220 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 299 (914)
...|++||||+|.|+ .+.++..-++.++.|++|+|.+..+ +-...+++|+.||||+|.++ .+..+-..+.+.+.|
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v---~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV---QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee---hhhhhcccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 678999999999988 5667777788888888888888743 22446788888888888877 455555667788888
Q ss_pred cccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCC
Q 042766 300 DLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGG 362 (914)
Q Consensus 300 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 362 (914)
.|+.|.|... ..+..+-+|..||+++|+|.... -...+++++-|+.+.|.+|.+.+
T Consensus 358 ~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ld-----eV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 358 KLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELD-----EVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred ehhhhhHhhh--hhhHhhhhheeccccccchhhHH-----HhcccccccHHHHHhhcCCCccc
Confidence 8888877632 23455667778888888876652 23356778888888888888774
No 479
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.01 E-value=3e-11 Score=122.54 Aligned_cols=153 Identities=20% Similarity=0.331 Sum_probs=114.9
Q ss_pred HHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCC
Q 042766 754 EALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHC 833 (914)
Q Consensus 754 ~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~ 833 (914)
.-+-++.|.|+|+++.|+.+..+++.....++.|||+.|++.+++++.+. ....+......+|+-||..||.|||+.
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~--~~~a~~~~~wkkw~tqIlsal~yLhs~- 195 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKK--NQKALFQKAWKKWCTQILSALSYLHSC- 195 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHH--hhhhhhHHHHHHHHHHHHhhhhhhhcc-
Confidence 34556689999999999888777677788899999999999999987542 335677788889999999999999996
Q ss_pred CCCcEecCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccc
Q 042766 834 QPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCT 909 (914)
Q Consensus 834 ~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~ 909 (914)
.|+|+|+++..+-|++..+|-+||.- +....... ..............|-++|.|||.-. ..++|||+||..
T Consensus 196 ~PpiihgnlTc~tifiq~ngLIkig~-~ap~s~h~---s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmc 271 (458)
T KOG1266|consen 196 DPPIIHGNLTCDTIFIQHNGLIKIGS-VAPDSTHP---SVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMC 271 (458)
T ss_pred CCccccCCcchhheeecCCceEEecc-cCccccch---hhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHH
Confidence 88999999999999999999999742 21111110 00001111122235778999999873 589999999977
Q ss_pred cccc
Q 042766 910 NVHH 913 (914)
Q Consensus 910 ~~~~ 913 (914)
.++|
T Consensus 272 Alem 275 (458)
T KOG1266|consen 272 ALEM 275 (458)
T ss_pred HHHH
Confidence 6665
No 480
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.00 E-value=3e-09 Score=110.12 Aligned_cols=145 Identities=23% Similarity=0.303 Sum_probs=106.6
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCC--CcceEEeEeecCCCCCCceEeEEEe
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHR--NLIKIITICSSTDFEGVDFKALVFE 787 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~~~~~~~~~~lv~e 787 (914)
+.++.|.++.||+++..+ |+.+++|+...... .....+.+|+++++.+.+. .+.+++.+..... ..+..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEE
Confidence 568999999999998753 57899998754332 2345788999999999763 4567777643221 1124589999
Q ss_pred cccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------
Q 042766 788 YMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHC---------------------------------- 833 (914)
Q Consensus 788 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~---------------------------------- 833 (914)
|++|.++.+.+.. ..++..+...++.++++++.++|+..
T Consensus 81 ~i~G~~l~~~~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (223)
T cd05154 81 RVDGRVLRDRLLR-------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDE 153 (223)
T ss_pred EeCCEecCCCCCC-------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccc
Confidence 9999888765421 13566667777888888888888521
Q ss_pred -------------------CCCcEecCCCCCCeeecC--CCcEEEeccccccc
Q 042766 834 -------------------QPPMVHGDLKPSNVLLDY--DMVAHVGDFGLAKF 865 (914)
Q Consensus 834 -------------------~~~ivHrDlkp~NILl~~--~~~~ki~DFGla~~ 865 (914)
...++|+|+.|.||+++. ++.+.|+||+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 154 PPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred cHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246899999999999998 67789999998863
No 481
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.94 E-value=2e-09 Score=120.48 Aligned_cols=166 Identities=18% Similarity=0.215 Sum_probs=124.4
Q ss_pred EEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccC
Q 042766 723 KGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSN 802 (914)
Q Consensus 723 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 802 (914)
.|..+.++.+|.|...+...........+-++.++.++||+|++++.. ++..+..|+|+|-+. .|..++++..
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t-----~e~~~~~ylvTErV~--Pl~~~lk~l~ 102 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDT-----TEEEGTLYLVTERVR--PLETVLKELG 102 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhh-----hcccCceEEEeeccc--cHHHHHHHhH
Confidence 466667888999998876655445567778889999999999999976 455568999999884 6888887532
Q ss_pred CcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccc
Q 042766 803 DQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSI 882 (914)
Q Consensus 803 ~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~ 882 (914)
.....--+.||+.||.|||+.| +++|+++.-..|+++..|.-||++|.++....+... +..
T Consensus 103 ---------~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~------~~~-- 163 (690)
T KOG1243|consen 103 ---------KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA------PAK-- 163 (690)
T ss_pred ---------HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc------ccc--
Confidence 4455667889999999999765 999999999999999999999999998865432111 000
Q ss_pred cccCcccccccchhh--hhhcccCcccccccccC
Q 042766 883 GIKGTVGYVAPGKFF--MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 883 ~~~GT~~y~APE~~~--~~~~Di~s~g~~~~~~f 914 (914)
...---.|..||... +...|.|-|||.+.+.|
T Consensus 164 ~~~~~~s~~~P~~~~~s~~s~D~~~Lg~li~el~ 197 (690)
T KOG1243|consen 164 SLYLIESFDDPEEIDPSEWSIDSWGLGCLIEELF 197 (690)
T ss_pred cchhhhcccChhhcCccccchhhhhHHHHHHHHh
Confidence 011122366676653 35789999999988765
No 482
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.92 E-value=1.3e-09 Score=79.41 Aligned_cols=39 Identities=59% Similarity=1.075 Sum_probs=31.2
Q ss_pred HhHHHHHHHHHHhcC-CCCCCCCCCCCC--CCCCCccceeec
Q 042766 35 ETDRLALLAIKSQLH-DPSGVTSSWNNT--MNFCQWTGVTCG 73 (914)
Q Consensus 35 ~~~~~aLl~~k~~~~-~~~~~~~~w~~~--~~~c~w~gv~C~ 73 (914)
++|++||++||+++. +|.+.+.+|+.. .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 679999999999998 577899999976 799999999995
No 483
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.89 E-value=1.3e-09 Score=86.92 Aligned_cols=60 Identities=37% Similarity=0.540 Sum_probs=33.9
Q ss_pred cceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCcc
Q 042766 519 NLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNL 578 (914)
Q Consensus 519 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 578 (914)
+|++|++++|+++.+.+..|.++++|++|++++|+++...|.+|..+++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455555555555555555555555555555555555555555555555555555555543
No 484
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.89 E-value=1.2e-09 Score=131.96 Aligned_cols=131 Identities=24% Similarity=0.300 Sum_probs=82.5
Q ss_pred CCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCC--CCCcCC-CCccccCCcchhccCCCcccCCCChhcccccc
Q 042766 98 GNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNS--FSGTIP-TNLSRCSNLIHFCASNNKLEGQIPKEIGNLLK 174 (914)
Q Consensus 98 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~--l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 174 (914)
.+....|...+.+|.+. .++....+ ++|+.|-+..|. +. .++ ..|..++.|+.||||+|.=-+.+|+.++.|-+
T Consensus 520 ~~~~~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~ 596 (889)
T KOG4658|consen 520 KSWNSVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVH 596 (889)
T ss_pred cchhheeEEEEeccchh-hccCCCCC-CccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhh
Confidence 34456677777777665 44443332 357777777765 33 333 33556777777777766555567777777777
Q ss_pred ccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhccccccccccc
Q 042766 175 LQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQ 232 (914)
Q Consensus 175 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 232 (914)
||+|+|++..++ .+|..+++|..|.+|++..+.-...+|.....|++|++|.+-.-.
T Consensus 597 LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 597 LRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred hhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 777777777776 667777777777777777665544556666666777776665543
No 485
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.85 E-value=2.1e-09 Score=85.63 Aligned_cols=61 Identities=38% Similarity=0.536 Sum_probs=58.2
Q ss_pred ccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCcc
Q 042766 542 VSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYF 602 (914)
Q Consensus 542 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 602 (914)
++|++|++++|+++...+.+|..+++|++|++++|+++...|+.|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5799999999999988889999999999999999999999999999999999999999985
No 486
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.84 E-value=2.3e-08 Score=98.73 Aligned_cols=125 Identities=25% Similarity=0.252 Sum_probs=81.1
Q ss_pred EEEEEEECCCcEEEEEEEeeccC-------------Cc-------------chHHHHHHHHHHHhcCCC--CcceEEeEe
Q 042766 720 TVYKGILGDDEMVVAVKVINLKQ-------------KG-------------ASKSFVSECEALRNIRHR--NLIKIITIC 771 (914)
Q Consensus 720 ~Vy~~~~~~~~~~vavK~~~~~~-------------~~-------------~~~~~~~E~~~l~~l~h~--niv~l~~~~ 771 (914)
.||.|... ++..+|+|+.+... .. ......+|++.|.++... ++.+.+.+.
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 38999885 67799999986311 00 013567899999999766 466766551
Q ss_pred ecCCCCCCceEeEEEeccc--CCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHH-HhCCCCCcEecCCCCCCee
Q 042766 772 SSTDFEGVDFKALVFEYME--NGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVL 848 (914)
Q Consensus 772 ~~~~~~~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~L-H~~~~~~ivHrDlkp~NIL 848 (914)
...+||||++ |..+..+.... ++......++.+++..+..+ |.. ||||+|+.+.||+
T Consensus 80 ---------~~~ivME~I~~~G~~~~~l~~~~--------~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIl 139 (188)
T PF01163_consen 80 ---------RNVIVMEYIGEDGVPLPRLKDVD--------LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNIL 139 (188)
T ss_dssp ---------TTEEEEE--EETTEEGGCHHHCG--------GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEE
T ss_pred ---------CCEEEEEecCCCccchhhHHhcc--------ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEE
Confidence 2469999998 55554433321 11223455677788866664 677 9999999999999
Q ss_pred ecCCCcEEEecccccccc
Q 042766 849 LDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 849 l~~~~~~ki~DFGla~~~ 866 (914)
++++ .+.|+|||.|...
T Consensus 140 v~~~-~~~iIDf~qav~~ 156 (188)
T PF01163_consen 140 VDDG-KVYIIDFGQAVDS 156 (188)
T ss_dssp EETT-CEEE--GTTEEET
T ss_pred eecc-eEEEEecCcceec
Confidence 9988 8999999988643
No 487
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.82 E-value=3.4e-09 Score=128.11 Aligned_cols=132 Identities=20% Similarity=0.304 Sum_probs=107.7
Q ss_pred CCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCc--ccCCCChhccccccccccccccccccCcCCccccccccc
Q 042766 122 GNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNK--LEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAI 199 (914)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~--l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 199 (914)
.+....+...+-+|++. .++.... .++|++|-+..|. +....++.|..++.|++|||++|.=-+.+|+++++|-+|
T Consensus 520 ~~~~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~L 597 (889)
T KOG4658|consen 520 KSWNSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHL 597 (889)
T ss_pred cchhheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhh
Confidence 34467888888888886 5555544 3379999999986 542333457789999999999987777999999999999
Q ss_pred ceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCc
Q 042766 200 EVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENR 256 (914)
Q Consensus 200 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 256 (914)
++|+|++..++ .+|..+++|++|.+||+..+.-...+|.....+++|++|.+..-.
T Consensus 598 ryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 598 RYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred hcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 99999999998 899999999999999999988766678888889999999886554
No 488
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.79 E-value=9.2e-08 Score=100.45 Aligned_cols=146 Identities=14% Similarity=0.044 Sum_probs=99.4
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccCC-----------cchHHHHHHHHHHHhcCCCCc--ceEEeEeecCCCC
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-----------GASKSFVSECEALRNIRHRNL--IKIITICSSTDFE 777 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~~~~ 777 (914)
+.+-+.....|+++.. .|+.|.||....... .....+.+|...+.++...+| ++..++.......
T Consensus 28 e~v~~~~~rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 28 EVFRELEGRRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred cEEecCCCceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 3444444455777665 467899997642220 111247899999888854333 3444443221111
Q ss_pred CCceEeEEEecccCC-CHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC-----
Q 042766 778 GVDFKALVFEYMENG-SLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY----- 851 (914)
Q Consensus 778 ~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~----- 851 (914)
.....++|||++++. +|.+++..... ...+...+..++.+++..+.-||.. ||+|+|+++.|||++.
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~~----~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~ 178 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWAT----NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGR 178 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCC
Confidence 123568999999876 89998853211 2345566778999999999999999 9999999999999985
Q ss_pred --CCcEEEeccccccc
Q 042766 852 --DMVAHVGDFGLAKF 865 (914)
Q Consensus 852 --~~~~ki~DFGla~~ 865 (914)
++.+.++||+.++.
T Consensus 179 ~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 179 EEDLKLSVIDLHRAQI 194 (268)
T ss_pred CCCceEEEEECCcccc
Confidence 46899999998864
No 489
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.70 E-value=1e-07 Score=96.30 Aligned_cols=136 Identities=26% Similarity=0.227 Sum_probs=98.5
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC----------------C------cchHHHHHHHHHHHhcCCC-
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ----------------K------GASKSFVSECEALRNIRHR- 762 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------------~------~~~~~~~~E~~~l~~l~h~- 762 (914)
-..+...||-|--+.||.|... .|.++|||.-+... . .......+|+++|.++.-.
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G 170 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG 170 (304)
T ss_pred HHhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC
Confidence 3456789999999999999987 67889999764210 0 0123578999999999755
Q ss_pred -CcceEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecC
Q 042766 763 -NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGD 841 (914)
Q Consensus 763 -niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrD 841 (914)
.|.+.+++ +...+||||++|-.|...- ++....-.++..|++-+.-.-.. ||||+|
T Consensus 171 ~~VP~P~~~---------nRHaVvMe~ieG~eL~~~r-----------~~~en~~~il~~il~~~~~~~~~---GiVHGD 227 (304)
T COG0478 171 VKVPKPIAW---------NRHAVVMEYIEGVELYRLR-----------LDVENPDEILDKILEEVRKAYRR---GIVHGD 227 (304)
T ss_pred CCCCCcccc---------ccceeeeehcccceeeccc-----------CcccCHHHHHHHHHHHHHHHHHc---CccccC
Confidence 66766654 3568999999986665532 11223334455555555555566 999999
Q ss_pred CCCCCeeecCCCcEEEeccccccc
Q 042766 842 LKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 842 lkp~NILl~~~~~~ki~DFGla~~ 865 (914)
+.+=||++++||.+.++||--+..
T Consensus 228 lSefNIlV~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 228 LSEFNILVTEDGDIVVIDWPQAVP 251 (304)
T ss_pred CchheEEEecCCCEEEEeCccccc
Confidence 999999999999999999976653
No 490
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.68 E-value=1e-08 Score=113.97 Aligned_cols=188 Identities=19% Similarity=0.194 Sum_probs=134.5
Q ss_pred HHHhhcccccCcccCCccEEEEEEEEC-CCcEEEEEEEeeccCCcch--HHHHHHHHHHHhc-CCCCcceEEeEeecCCC
Q 042766 701 SKATSEFSSSNMIGQGRFGTVYKGILG-DDEMVVAVKVINLKQKGAS--KSFVSECEALRNI-RHRNLIKIITICSSTDF 776 (914)
Q Consensus 701 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 776 (914)
.....+|..+..||.|.|+.|+.+..+ .++..||+|.....-.... ..-..|+.+...+ -|.+++.++.. +
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-----W 335 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSS-----W 335 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCC-----c
Confidence 344567888999999999999998766 6788999997753322221 2234566666666 48888776544 2
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC-CcE
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD-MVA 855 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~-~~~ 855 (914)
......++--|||++++........ ..+++...+++..|++.++.++|+. .++|+|+||+||++..+ +..
T Consensus 336 ~~~r~~~ip~e~~~~~s~~l~~~~~------~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~ 406 (524)
T KOG0601|consen 336 SQLRQGYIPLEFCEGGSSSLRSVTS------QMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFS 406 (524)
T ss_pred cccccccCchhhhcCcchhhhhHHH------HhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhh
Confidence 3333567889999999888766322 4567778889999999999999988 99999999999999886 788
Q ss_pred EEecccccccccccccccccCCCCccccccCccccc-ccchh-----hhhhcccCccccccccc
Q 042766 856 HVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYV-APGKF-----FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 856 ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~-APE~~-----~~~~~Di~s~g~~~~~~ 913 (914)
+++|||+++.+.-.. ....++-+++ ++|.. ...+.|++|||.++++.
T Consensus 407 ~~~~~~~~t~~~~~~-----------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~ 459 (524)
T KOG0601|consen 407 KLGDFGCWTRLAFSS-----------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEA 459 (524)
T ss_pred hccccccccccceec-----------ccccccccccccchhhcccccccccccccccccccccc
Confidence 999999986432111 0122333444 24444 35899999999887764
No 491
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.67 E-value=8.2e-10 Score=122.86 Aligned_cols=181 Identities=29% Similarity=0.286 Sum_probs=89.3
Q ss_pred ChhhhcccCCceeeecccccccccCccccCC-CCCCeEEeeCCcCCC---CCCCccCC------CCCccccccCCCccCC
Q 042766 414 PDVISELKNLQQLSVFNNFLRGGIPSGLGNL-TKLGSLDLGSNSLQG---NIPSSLGN------CQNLILFIASYNKLTG 483 (914)
Q Consensus 414 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~---~~p~~~~~------l~~L~~L~l~~N~l~~ 483 (914)
|-.+..+.+|+.|.|.++.|.. ...+..+ .+|+.|-.. |.++. .+....+. .-.|...+.++|.|.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLICH-NSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhhh-ccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-
Confidence 3345566777777777777653 1112211 234444322 22221 11111111 123445556666665
Q ss_pred CCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchh
Q 042766 484 DLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFR 563 (914)
Q Consensus 484 ~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 563 (914)
.+..++.-++.+ +.||||+|+++..- .+..++.|++|||+.|++..++--...++. |+.|+|++|.++... .+.
T Consensus 178 ~mD~SLqll~al-e~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL~--gie 251 (1096)
T KOG1859|consen 178 LMDESLQLLPAL-ESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTLR--GIE 251 (1096)
T ss_pred hHHHHHHHHHHh-hhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhhh--hHH
Confidence 333333333333 56666666665321 455566666666666666643333333443 666666666665322 345
Q ss_pred ccCCCCEEEccCCccccccC-ccccccCCCCeEeCCCCcccc
Q 042766 564 FLKSIKALNVSSNNLSGKIP-EFLENLSFLEFLNLSYNYFEG 604 (914)
Q Consensus 564 ~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~ 604 (914)
+|++|+.||||+|-|++.-. ..+..|..|..|+|.+|++.|
T Consensus 252 ~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred hhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 66666666666666654211 123445556666666666654
No 492
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.66 E-value=1.9e-07 Score=101.38 Aligned_cols=145 Identities=17% Similarity=0.184 Sum_probs=115.2
Q ss_pred EEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEEecccC-CCHHHH
Q 042766 719 GTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVFEYMEN-GSLEDW 797 (914)
Q Consensus 719 g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~-gsL~~~ 797 (914)
.+.|+|....+|..|++|+++............-+++++++.|+|||++.+++....|.+ ...++|++|.|+ ++|.+.
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D-~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGD-LSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCc-ceEEEEEecCCCCchHHHH
Confidence 578999999999999999996444333334455688999999999999999877555433 357899999986 688876
Q ss_pred HhccCC---------cccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccc
Q 042766 798 LHQSND---------QVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867 (914)
Q Consensus 798 l~~~~~---------~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~ 867 (914)
...... ..+....++...|.++.|+..||.++|+. |..-+-+.|.+|+++.+.+++|+..|....+.
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeec
Confidence 543221 12345678899999999999999999999 99999999999999999999998888776554
No 493
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.52 E-value=1.5e-06 Score=88.29 Aligned_cols=111 Identities=26% Similarity=0.295 Sum_probs=84.6
Q ss_pred hHHHHHHHHHHHhcCCCC--cceEEeEeecCCCCCCceEeEEEecccCC-CHHHHHhccCCcccccCCCHHHHHHHHHHH
Q 042766 746 SKSFVSECEALRNIRHRN--LIKIITICSSTDFEGVDFKALVFEYMENG-SLEDWLHQSNDQVEVRKLSLIQRMNIAIDV 822 (914)
Q Consensus 746 ~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~i~~~i 822 (914)
.....+|...+..+.... +.+.+++..... ......++|+|++++. +|.+++.... ..+......++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~-~~~~~s~lite~l~~~~~L~~~~~~~~------~~~~~~~~~ll~~l 127 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRK-GGGYRSYLITEALPGAQDLRDLLQQWE------QLDPSQRRELLRAL 127 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcC-CCceeEEEEEEeCCCcccHHHHHHhhc------ccchhhHHHHHHHH
Confidence 356788999888875333 445555544322 1123568999999884 8999987532 24555677899999
Q ss_pred HHHHHHHHhCCCCCcEecCCCCCCeeecCCC---cEEEecccccccc
Q 042766 823 ASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM---VAHVGDFGLAKFL 866 (914)
Q Consensus 823 ~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~---~~ki~DFGla~~~ 866 (914)
+..++-||+. ||+|+|+++.|||++.++ .+.++||+-++..
T Consensus 128 ~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 128 ARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9999999999 999999999999999887 8999999988754
No 494
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.46 E-value=4.3e-09 Score=117.26 Aligned_cols=125 Identities=24% Similarity=0.292 Sum_probs=51.3
Q ss_pred ccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCC-ccccccccceeecc
Q 042766 175 LQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPR-SICNISSVELIFLT 253 (914)
Q Consensus 175 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~ 253 (914)
|...+.+.|.++ .+..++.-++.|+.|+|++|+++.. +.+..+++|++|||+.|++.. +|. ....+. |+.|.++
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~-vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRH-VPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhcc-ccccchhhhh-heeeeec
Confidence 444444444444 3333444444444444444444422 134444444444444444442 221 111222 4444444
Q ss_pred CCcccCcccccccccCcccceeeccCccCCCCC-CCccccccccccccccCccCC
Q 042766 254 ENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSI-PDSLSNASNLELLDLPSNQFK 307 (914)
Q Consensus 254 ~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~ 307 (914)
+|.++... + ..+|.+|+.|||++|-|.+.- -..+..+..|+.|.|.+|.+-
T Consensus 241 nN~l~tL~--g-ie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTTLR--G-IENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHhhh--h-HHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 44444221 1 124445555555555443211 011333445555555555443
No 495
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.45 E-value=1.5e-08 Score=90.44 Aligned_cols=103 Identities=28% Similarity=0.357 Sum_probs=44.3
Q ss_pred EEEecCCCCCccccCCC---CCCCCCCCEEEcCCCCCcccCCcccC-CCCCCCeeecCCCCCCCcCCCCccccCCcchhc
Q 042766 80 TELNLSSQRIGGVLSPY---VGNLSFLRYINLADNGFRGDIPQEIG-NLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFC 155 (914)
Q Consensus 80 ~~l~l~~~~l~~~~~~~---l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 155 (914)
-.+||+++.+ +.++.. +....+|+..+|++|.|. ..|..|. ..+.++.|+|++|+++ .+|.++..++.|+.|+
T Consensus 30 h~ldLssc~l-m~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 30 HFLDLSSCQL-MYIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhcccccchh-hHHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 3455555554 223322 223334444455555554 3333332 2234444444444444 4444444444444444
Q ss_pred cCCCcccCCCChhcccccccccccccccccc
Q 042766 156 ASNNKLEGQIPKEIGNLLKLQRLSVDINYLT 186 (914)
Q Consensus 156 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 186 (914)
++.|.+. ..|..|..|.+|-.||..+|.+.
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred cccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 4444444 33444444444444444444433
No 496
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.45 E-value=3.3e-08 Score=99.39 Aligned_cols=189 Identities=24% Similarity=0.264 Sum_probs=103.2
Q ss_pred CCCCCCEEEcCCCCCcc--cCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccC-CCChhccccccc
Q 042766 99 NLSFLRYINLADNGFRG--DIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEG-QIPKEIGNLLKL 175 (914)
Q Consensus 99 ~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L 175 (914)
..++++.|||.+|.|+. +|-.-+.+|+.|++|+||.|++...|-..=..+++|++|-|.+..+.- .....+..++.+
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~v 148 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKV 148 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhh
Confidence 34677788888888773 233445677788888888888774332211455677777776666542 223345566777
Q ss_pred cccccccccccCcCCcccccccccceeecccCCCCCCCCc--cchhhhcccccccccccccCCCCCccccccccceeecc
Q 042766 176 QRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPT--TLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLT 253 (914)
Q Consensus 176 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 253 (914)
++|++|.|.+. .+.+..|-.+...|+ .+..++.+..+.++-|++...+| ++..+.+-
T Consensus 149 telHmS~N~~r--------------q~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fp-------nv~sv~v~ 207 (418)
T KOG2982|consen 149 TELHMSDNSLR--------------QLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFP-------NVNSVFVC 207 (418)
T ss_pred hhhhhccchhh--------------hhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcc-------cchheeee
Confidence 77777766433 222333333322221 12233445556666666664443 44555555
Q ss_pred CCcccCcccccccccCcccceeeccCccCCCC-CCCccccccccccccccCccCCc
Q 042766 254 ENRFSGIFPFDILLNLPNLKKLGIGGNNFVGS-IPDSLSNASNLELLDLPSNQFKG 308 (914)
Q Consensus 254 ~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~ 308 (914)
.|.+...-...-+..++.+-.|+|+.|+|..- --+.+..++.|..|.+++|.+..
T Consensus 208 e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 208 EGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred cCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 66554333333333455555666666666421 12345556666666666666553
No 497
>PRK09902 hypothetical protein; Provisional
Probab=98.43 E-value=5.4e-06 Score=82.29 Aligned_cols=145 Identities=19% Similarity=0.120 Sum_probs=103.1
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeecc-C-----CcchHHHHHHHHHHHhcCCCC--cceEEeEeecCCCCCCceE
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLK-Q-----KGASKSFVSECEALRNIRHRN--LIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~-----~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~~~~~ 782 (914)
---|+||-+.|++....+ +.+=+|+-... . +-....|.+|+..+.++...+ +.+.. ++...........
T Consensus 24 pN~~rgG~SgV~r~~~~g--~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA 100 (216)
T PRK09902 24 PNYRRNGMSGVQCVERNG--KKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRA 100 (216)
T ss_pred CCcCCCCcceEEEEEeCC--cEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEE
Confidence 345778888999977643 35677766411 0 234578999999999985332 44444 2221111223346
Q ss_pred eEEEecccC-CCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc--EEEec
Q 042766 783 ALVFEYMEN-GSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV--AHVGD 859 (914)
Q Consensus 783 ~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~--~ki~D 859 (914)
+||+|-++| .+|.+++.+... .+.+..++..+..++++.++-||+. ++.|+|+.+.||+++.++. ++++|
T Consensus 101 ~LVTe~L~g~~~L~~~l~~~~~----~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lID 173 (216)
T PRK09902 101 LLVTEDMAGFISIADWYAQHAV----SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLD 173 (216)
T ss_pred EEEEEeCCCCccHHHHHhcCCc----CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEE
Confidence 899997753 589998865321 3456777788999999999999999 9999999999999987666 99999
Q ss_pred cccccc
Q 042766 860 FGLAKF 865 (914)
Q Consensus 860 FGla~~ 865 (914)
|.-++.
T Consensus 174 lEk~r~ 179 (216)
T PRK09902 174 LEKSRR 179 (216)
T ss_pred hhccch
Confidence 987764
No 498
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.43 E-value=1.9e-08 Score=89.76 Aligned_cols=134 Identities=18% Similarity=0.365 Sum_probs=100.8
Q ss_pred CCEEEcCCCCCcccCCccc---CCCCCCCeeecCCCCCCCcCCCCcc-ccCCcchhccCCCcccCCCChhcccccccccc
Q 042766 103 LRYINLADNGFRGDIPQEI---GNLFRLEKLALSNNSFSGTIPTNLS-RCSNLIHFCASNNKLEGQIPKEIGNLLKLQRL 178 (914)
Q Consensus 103 L~~L~L~~n~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 178 (914)
+..+||+++.+- .+++.. ....+|+..+||+|.|. .+|+.|. ..+-++.|+|++|+++ .+|.++..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 456788888775 566554 45556777799999998 6666665 4468999999999998 889999999999999
Q ss_pred ccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCcc
Q 042766 179 SVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSI 241 (914)
Q Consensus 179 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 241 (914)
+++.|.+. ..|.-+..|.+|..|+..+|.+. .+|..+-.-+..-..++.++.+.+.-+.-+
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~kl 166 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKL 166 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcccc
Confidence 99999998 77888888999999999999887 666654333444445566667766555433
No 499
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.34 E-value=1.8e-06 Score=98.24 Aligned_cols=141 Identities=20% Similarity=0.263 Sum_probs=91.9
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccC----------------------Cc----c--------------hHHHH
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ----------------------KG----A--------------SKSFV 750 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------------------~~----~--------------~~~~~ 750 (914)
+.|+.++-|.||+|+.+ +|+.||||+.++.- .. . .-++.
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 67999999999999998 58999999986421 00 0 01345
Q ss_pred HHHHHHHhcC-----CCCcceEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHH
Q 042766 751 SECEALRNIR-----HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASA 825 (914)
Q Consensus 751 ~E~~~l~~l~-----h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~g 825 (914)
+|+..+.+++ .+.+. +=.+| ++-.....++|||++|-.+.++..... ...+.. .++..++++
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~-VP~V~----we~t~~~VLtmE~i~Gi~i~d~~~l~~-----~g~d~k---~ia~~~~~~ 276 (517)
T COG0661 210 REAANAERFRENFKDDPDVY-VPKVY----WEYTTRRVLTMEWIDGIKISDIAALKS-----AGIDRK---ELAELLVRA 276 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeE-eceee----hhccCCcEEEEEeeCCEecccHHHHHh-----cCCCHH---HHHHHHHHH
Confidence 6666666652 34432 21222 222235689999999988888743221 223322 233333332
Q ss_pred -HHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccccc
Q 042766 826 -IEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSN 868 (914)
Q Consensus 826 -l~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~ 868 (914)
+.-+-.. |+.|.|..|.||+++.+|++.+.|||+...+.+
T Consensus 277 f~~q~~~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 277 FLRQLLRD---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHHHhc---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 1222223 899999999999999999999999999887654
No 500
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.33 E-value=8.3e-08 Score=112.21 Aligned_cols=196 Identities=21% Similarity=0.225 Sum_probs=132.4
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
..+.+.+.+-+.+|+++.++.++-..++...++|+..... ..+.+....+-.+.-...||-++....- +...
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s-----~~~r 876 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS-----FPCR 876 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC-----CCCC
Confidence 4456777888999999999998887777666666553221 1122233333333333445665544322 3344
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||+|..++++...++..+. .+..-+......+..+.+|||.. .++|||+||.|+++..+++.+++|
T Consensus 877 sP~~L~~~~~~~~~~~Skl~~~~~------~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~ 947 (1205)
T KOG0606|consen 877 SPLPLVGHYLNGGDLPSKLHNSGC------LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTD 947 (1205)
T ss_pred CCcchhhHHhccCCchhhhhcCCC------cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCc
Confidence 567899999999999999887652 22223334455678899999998 799999999999999999999999
Q ss_pred cccccccccc----------------cccc-------ccCCCCccccccCcccccccchhh----hhhcccCcccccccc
Q 042766 860 FGLAKFLSNH----------------HLDI-------ASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVH 912 (914)
Q Consensus 860 FGla~~~~~~----------------~~~~-------~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~ 912 (914)
||.......- .... ............||+.|.|||... +..+|.|+.|...+|
T Consensus 948 ~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e 1027 (1205)
T KOG0606|consen 948 FGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFE 1027 (1205)
T ss_pred cccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhh
Confidence 9854332110 0000 000112244678999999999996 489999999988776
Done!