Query 042766
Match_columns 914
No_of_seqs 950 out of 6025
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 16:09:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042766.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042766hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 3.6E-87 1.2E-91 820.2 36.2 609 27-645 3-755 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.5E-68 5.2E-73 655.2 27.6 521 99-632 75-722 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 4.5E-63 1.5E-67 601.1 36.7 549 77-629 25-625 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 1E-60 3.5E-65 580.4 37.1 524 77-608 49-627 (680)
5 3t6q_A CD180 antigen; protein- 100.0 1.2E-60 4.1E-65 572.0 34.3 518 77-609 33-566 (606)
6 4eco_A Uncharacterized protein 100.0 1.1E-61 3.8E-66 580.8 21.1 502 32-604 26-601 (636)
7 3vq2_A TLR4, TOLL-like recepto 100.0 1.4E-59 4.8E-64 562.8 35.1 515 77-610 32-565 (606)
8 3j0a_A TOLL-like receptor 5; m 100.0 2.3E-59 7.9E-64 579.7 37.0 522 65-610 14-567 (844)
9 3t6q_A CD180 antigen; protein- 100.0 2E-59 6.9E-64 561.4 29.1 529 83-629 18-563 (606)
10 4ecn_A Leucine-rich repeat pro 100.0 2.1E-59 7.1E-64 569.3 28.2 507 30-578 263-863 (876)
11 3j0a_A TOLL-like receptor 5; m 100.0 1.4E-57 4.7E-62 563.9 36.1 523 81-629 8-563 (844)
12 3vq2_A TLR4, TOLL-like recepto 100.0 1.2E-57 4.3E-62 545.8 30.1 526 81-629 15-561 (606)
13 2z81_A CD282 antigen, TOLL-lik 100.0 9.5E-55 3.3E-59 514.5 28.2 494 64-608 3-515 (549)
14 2z63_A TOLL-like receptor 4, v 100.0 5.3E-53 1.8E-57 502.0 33.7 494 77-611 28-539 (570)
15 4g8a_A TOLL-like receptor 4; l 100.0 8.3E-51 2.8E-55 489.6 33.6 516 77-609 52-586 (635)
16 4eco_A Uncharacterized protein 100.0 2.5E-52 8.4E-57 499.9 19.5 516 32-629 23-603 (636)
17 2z63_A TOLL-like receptor 4, v 100.0 3.3E-51 1.1E-55 486.6 27.3 504 83-629 13-534 (570)
18 4ecn_A Leucine-rich repeat pro 100.0 1.6E-51 5.6E-56 500.0 24.1 466 101-603 323-864 (876)
19 2z7x_B TOLL-like receptor 1, v 100.0 2.8E-51 9.7E-56 481.2 22.8 458 104-610 3-488 (520)
20 2z81_A CD282 antigen, TOLL-lik 100.0 1.4E-50 4.7E-55 478.9 25.2 483 104-629 8-513 (549)
21 2z7x_B TOLL-like receptor 1, v 100.0 7E-51 2.4E-55 477.9 17.3 456 80-583 3-485 (520)
22 4g8a_A TOLL-like receptor 4; l 100.0 1.5E-48 5.2E-53 469.9 30.0 529 83-629 37-583 (635)
23 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.7E-48 1.9E-52 457.1 23.8 462 102-610 32-517 (562)
24 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.6E-47 8.9E-52 451.4 19.0 456 80-583 34-514 (562)
25 1ogq_A PGIP-2, polygalacturona 100.0 1.6E-46 5.5E-51 409.6 16.9 293 32-329 2-302 (313)
26 1jl5_A Outer protein YOPM; leu 100.0 1.6E-44 5.3E-49 413.5 22.0 401 125-607 11-415 (454)
27 1jl5_A Outer protein YOPM; leu 100.0 7.5E-44 2.6E-48 407.8 21.6 428 94-609 4-435 (454)
28 3v47_A TOLL-like receptor 5B a 100.0 1.4E-43 4.7E-48 408.7 23.8 374 202-609 15-414 (455)
29 3v47_A TOLL-like receptor 5B a 100.0 2.6E-43 9E-48 406.3 25.5 368 101-487 30-413 (455)
30 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.6E-43 5.4E-48 377.7 12.3 189 705-913 32-227 (311)
31 4fih_A Serine/threonine-protei 100.0 2.2E-43 7.5E-48 382.4 12.1 187 705-914 74-264 (346)
32 4b9d_A Serine/threonine-protei 100.0 2.8E-43 9.5E-48 382.3 10.1 190 705-914 24-219 (350)
33 3bz5_A Internalin-J, INLJ; leu 100.0 1.1E-41 3.6E-46 390.4 23.4 363 92-539 33-395 (457)
34 4fie_A Serine/threonine-protei 100.0 1.6E-42 5.6E-47 384.8 13.3 187 705-914 151-341 (423)
35 4asz_A BDNF/NT-3 growth factor 100.0 1.2E-42 4.2E-47 372.3 10.2 196 705-914 13-224 (299)
36 3fpq_A Serine/threonine-protei 100.0 5.9E-42 2E-46 364.1 13.7 190 707-914 28-223 (290)
37 4aoj_A High affinity nerve gro 100.0 4.9E-42 1.7E-46 372.9 12.7 196 705-914 41-254 (329)
38 4g31_A Eukaryotic translation 100.0 7.8E-42 2.7E-46 366.8 13.5 204 704-913 4-223 (299)
39 3omv_A RAF proto-oncogene seri 100.0 4.2E-42 1.4E-46 368.0 11.2 188 704-914 35-231 (307)
40 4g3f_A NF-kappa-beta-inducing 100.0 4E-42 1.4E-46 371.6 10.4 188 704-913 57-249 (336)
41 3hyh_A Carbon catabolite-derep 100.0 8.5E-42 2.9E-46 359.6 11.6 186 704-913 12-205 (275)
42 4gt4_A Tyrosine-protein kinase 100.0 1.6E-41 5.4E-46 365.3 13.5 196 705-914 26-241 (308)
43 3ubd_A Ribosomal protein S6 ki 100.0 4.8E-42 1.6E-46 366.5 6.4 188 705-914 24-220 (304)
44 3bz5_A Internalin-J, INLJ; leu 100.0 2.8E-40 9.7E-45 378.5 20.6 364 137-609 30-393 (457)
45 2id5_A Lingo-1, leucine rich r 100.0 5.2E-40 1.8E-44 381.0 20.4 348 248-631 14-361 (477)
46 1o6v_A Internalin A; bacterial 100.0 3.8E-39 1.3E-43 372.1 25.0 343 78-483 47-389 (466)
47 3hmm_A TGF-beta receptor type- 100.0 1.6E-40 5.6E-45 358.5 12.0 195 705-914 3-212 (303)
48 1o6v_A Internalin A; bacterial 100.0 8.3E-39 2.9E-43 369.2 26.5 344 173-580 46-389 (466)
49 4ase_A Vascular endothelial gr 100.0 3.2E-40 1.1E-44 361.5 10.2 205 697-914 56-281 (353)
50 4b99_A Mitogen-activated prote 100.0 1.6E-39 5.4E-44 362.3 12.4 196 705-914 54-257 (398)
51 2id5_A Lingo-1, leucine rich r 100.0 1.1E-37 3.8E-42 361.4 23.0 349 224-609 14-362 (477)
52 3o6n_A APL1; leucine-rich repe 100.0 1.5E-37 5.2E-42 350.3 20.2 349 55-458 3-352 (390)
53 3v5w_A G-protein coupled recep 100.0 2.8E-38 9.5E-43 366.0 12.9 186 704-913 188-384 (689)
54 3oja_B Anopheles plasmodium-re 100.0 3.3E-37 1.1E-41 366.8 21.3 348 52-457 6-357 (597)
55 4f9c_A Cell division cycle 7-r 100.0 4.6E-38 1.6E-42 346.9 12.5 193 703-914 19-241 (361)
56 4fcg_A Uncharacterized protein 100.0 2E-37 6.7E-42 339.8 12.8 280 32-332 23-315 (328)
57 3uto_A Twitchin; kinase, muscl 100.0 4.9E-37 1.7E-41 359.4 12.7 188 704-913 156-349 (573)
58 3oja_B Anopheles plasmodium-re 100.0 4.3E-36 1.5E-40 357.2 20.9 343 244-638 50-392 (597)
59 1ogq_A PGIP-2, polygalacturona 100.0 5.1E-36 1.7E-40 326.6 17.1 254 374-629 51-307 (313)
60 3o6n_A APL1; leucine-rich repe 100.0 1.1E-35 3.8E-40 335.1 20.4 335 243-629 43-377 (390)
61 4fmz_A Internalin; leucine ric 100.0 1.6E-34 5.3E-39 320.4 23.9 305 99-458 42-346 (347)
62 4fmz_A Internalin; leucine ric 100.0 7.5E-34 2.6E-38 314.9 24.5 308 240-603 39-346 (347)
63 2ft3_A Biglycan; proteoglycan, 100.0 3.4E-34 1.2E-38 315.4 21.2 293 103-432 35-331 (332)
64 2ft3_A Biglycan; proteoglycan, 100.0 1.3E-33 4.6E-38 310.6 22.1 288 126-455 34-330 (332)
65 4aw2_A Serine/threonine-protei 100.0 1.4E-34 4.7E-39 327.9 11.7 197 698-914 67-275 (437)
66 1xku_A Decorin; proteoglycan, 100.0 2.3E-33 7.9E-38 308.5 20.9 291 82-432 36-330 (330)
67 3fxz_A Serine/threonine-protei 100.0 5.1E-34 1.8E-38 308.6 14.6 188 704-914 19-210 (297)
68 1o6l_A RAC-beta serine/threoni 100.0 4E-34 1.4E-38 314.1 13.2 189 704-914 4-199 (337)
69 3v8s_A RHO-associated protein 100.0 1.5E-34 5E-39 325.2 9.8 195 698-914 62-267 (410)
70 2vd5_A DMPK protein; serine/th 100.0 1.4E-34 4.9E-39 325.5 9.7 198 697-914 53-264 (412)
71 3fe3_A MAP/microtubule affinit 100.0 4.6E-34 1.6E-38 312.8 13.4 189 703-914 13-208 (328)
72 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.8E-34 9.5E-39 317.5 11.3 190 703-914 21-218 (353)
73 3s95_A LIMK-1, LIM domain kina 100.0 9.6E-34 3.3E-38 308.7 14.6 198 704-914 9-216 (310)
74 4dc2_A Protein kinase C IOTA t 100.0 6.5E-34 2.2E-38 318.1 13.2 189 704-914 51-247 (396)
75 1xku_A Decorin; proteoglycan, 100.0 6.7E-33 2.3E-37 304.9 20.7 289 102-455 32-329 (330)
76 3zgw_A Maternal embryonic leuc 100.0 6.1E-34 2.1E-38 313.5 11.7 191 703-914 8-204 (347)
77 1z7x_W Ribonuclease inhibitor; 100.0 5.6E-37 1.9E-41 354.0 -13.9 385 198-604 4-441 (461)
78 4fr4_A YANK1, serine/threonine 100.0 8.4E-34 2.9E-38 316.2 12.2 188 704-914 14-211 (384)
79 1xjd_A Protein kinase C, theta 100.0 9.4E-34 3.2E-38 312.0 12.4 192 701-914 13-212 (345)
80 1fot_A TPK1 delta, CAMP-depend 100.0 1E-33 3.5E-38 308.6 12.3 186 704-914 5-197 (318)
81 1z7x_W Ribonuclease inhibitor; 100.0 2.5E-37 8.4E-42 357.0 -17.3 362 78-460 4-413 (461)
82 3rp9_A Mitogen-activated prote 100.0 1.1E-33 3.7E-38 325.7 12.7 200 705-914 53-278 (458)
83 2c30_A Serine/threonine-protei 100.0 3.3E-33 1.1E-37 305.7 15.7 199 693-914 23-235 (321)
84 3a8x_A Protein kinase C IOTA t 100.0 1.8E-33 6.1E-38 310.4 13.5 189 704-914 8-204 (345)
85 3qd2_B Eukaryotic translation 100.0 3.8E-33 1.3E-37 307.1 15.2 206 703-914 4-270 (332)
86 2yab_A Death-associated protei 100.0 2.6E-33 8.8E-38 310.6 13.6 188 704-914 11-212 (361)
87 2i0e_A Protein kinase C-beta I 100.0 1.7E-33 5.8E-38 311.0 11.9 190 703-914 18-215 (353)
88 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.4E-33 8.2E-38 309.8 11.6 186 704-914 40-232 (350)
89 1tki_A Titin; serine kinase, m 100.0 6.1E-33 2.1E-37 303.4 14.1 188 704-914 4-197 (321)
90 4eqm_A Protein kinase; transfe 100.0 3.9E-33 1.3E-37 301.3 12.2 189 705-914 11-206 (294)
91 3tki_A Serine/threonine-protei 100.0 3.6E-33 1.2E-37 305.6 10.9 191 704-914 6-202 (323)
92 2psq_A Fibroblast growth facto 100.0 6.7E-33 2.3E-37 309.3 13.1 197 704-914 80-299 (370)
93 2r5t_A Serine/threonine-protei 100.0 3.1E-33 1.1E-37 311.1 10.1 189 704-914 37-233 (373)
94 3n9x_A Phosphotransferase; mal 100.0 5.8E-33 2E-37 316.5 12.6 201 704-914 25-246 (432)
95 3soa_A Calcium/calmodulin-depe 100.0 9.3E-33 3.2E-37 314.2 13.9 190 702-913 8-206 (444)
96 2y0a_A Death-associated protei 100.0 1.3E-32 4.6E-37 301.6 14.6 188 704-914 10-211 (326)
97 3c0i_A Peripheral plasma membr 100.0 6.4E-33 2.2E-37 307.3 12.2 193 704-914 23-227 (351)
98 2pmi_A Negative RE, cyclin-dep 100.0 8.1E-33 2.8E-37 302.2 12.8 194 704-914 4-203 (317)
99 2bdw_A Hypothetical protein K1 100.0 7.9E-33 2.7E-37 307.5 12.9 189 703-914 27-224 (362)
100 2acx_A G protein-coupled recep 100.0 7E-33 2.4E-37 321.1 12.9 190 704-914 183-379 (576)
101 3ugc_A Tyrosine-protein kinase 100.0 3.5E-33 1.2E-37 302.0 9.6 195 704-914 9-211 (295)
102 3kul_A Ephrin type-A receptor 100.0 6.8E-33 2.3E-37 303.8 11.6 193 704-914 48-248 (325)
103 3o0g_A Cell division protein k 100.0 1.5E-32 5.1E-37 296.5 13.7 188 705-914 2-196 (292)
104 3h4j_B AMPK kdaid, SNF1-like p 100.0 7.5E-33 2.6E-37 303.6 11.4 187 704-914 8-202 (336)
105 1kob_A Twitchin; kinase, intra 100.0 1E-32 3.6E-37 308.5 12.8 189 704-914 50-244 (387)
106 2zv2_A Calcium/calmodulin-depe 100.0 8.4E-33 2.9E-37 299.4 11.6 190 704-914 12-234 (298)
107 2qkw_B Protein kinase; three-h 100.0 4.6E-33 1.6E-37 304.9 8.7 199 699-914 33-235 (321)
108 3g33_A Cell division protein k 100.0 3.1E-32 1E-36 296.5 14.9 195 703-914 7-213 (308)
109 3uim_A Brassinosteroid insensi 100.0 1E-32 3.5E-37 302.9 11.2 207 693-914 18-229 (326)
110 3ork_A Serine/threonine protei 100.0 6.5E-33 2.2E-37 302.2 9.6 196 704-914 11-213 (311)
111 3a62_A Ribosomal protein S6 ki 100.0 1.1E-32 3.7E-37 302.5 11.3 189 704-914 16-215 (327)
112 2z80_A TOLL-like receptor 2, v 100.0 3.1E-32 1.1E-36 302.5 14.9 287 58-365 23-318 (353)
113 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.7E-32 5.8E-37 317.4 13.2 193 704-914 184-383 (543)
114 4euu_A Serine/threonine-protei 100.0 3E-32 1E-36 298.2 14.4 192 705-914 9-217 (319)
115 3gni_B Strad alpha; kinase fol 100.0 2.7E-32 9.1E-37 307.3 13.8 198 704-914 24-231 (389)
116 2izr_A Casein kinase I isoform 100.0 1.9E-32 6.3E-37 301.3 12.0 193 705-914 9-211 (330)
117 2x4f_A Myosin light chain kina 100.0 1.9E-32 6.4E-37 305.6 12.1 186 707-914 91-282 (373)
118 3soc_A Activin receptor type-2 100.0 1.6E-32 5.6E-37 300.5 11.3 194 704-914 23-232 (322)
119 3cbl_A C-FES, proto-oncogene t 100.0 7.9E-33 2.7E-37 309.8 8.9 192 704-914 113-309 (377)
120 3q4u_A Activin receptor type-1 100.0 3.5E-32 1.2E-36 295.0 13.4 191 704-914 7-217 (301)
121 3p86_A Serine/threonine-protei 100.0 2.3E-32 7.8E-37 297.2 11.9 195 699-914 31-233 (309)
122 4ejn_A RAC-alpha serine/threon 100.0 9.7E-33 3.3E-37 316.3 9.2 189 704-914 147-343 (446)
123 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.2E-32 4E-37 307.3 9.5 194 703-914 63-279 (365)
124 3uc3_A Serine/threonine-protei 100.0 2.9E-32 9.8E-37 303.1 12.4 187 704-914 19-212 (361)
125 3vhe_A Vascular endothelial gr 100.0 1.5E-32 5.2E-37 305.9 10.2 207 695-914 12-289 (359)
126 2ac3_A MAP kinase-interacting 100.0 6E-32 2E-36 295.4 14.7 195 705-914 12-220 (316)
127 3niz_A Rhodanese family protei 100.0 3.6E-32 1.2E-36 296.2 12.6 188 704-914 20-214 (311)
128 4hcu_A Tyrosine-protein kinase 100.0 4.6E-32 1.6E-36 289.0 12.8 189 704-914 9-201 (269)
129 3f3z_A Calcium/calmodulin-depe 100.0 7E-32 2.4E-36 288.9 14.3 189 703-914 7-201 (277)
130 3ttj_A Mitogen-activated prote 100.0 2.9E-32 1E-36 312.7 11.9 190 704-914 61-257 (464)
131 3l9p_A Anaplastic lymphoma kin 100.0 1.4E-32 4.8E-37 306.4 9.0 197 704-914 70-280 (367)
132 3oz6_A Mitogen-activated prote 100.0 3.5E-32 1.2E-36 306.1 12.2 199 702-914 6-225 (388)
133 3g2f_A Bone morphogenetic prot 100.0 4.9E-32 1.7E-36 298.8 12.8 199 704-914 12-229 (336)
134 2y94_A 5'-AMP-activated protei 100.0 3.2E-32 1.1E-36 311.7 11.6 188 704-914 15-210 (476)
135 4fvq_A Tyrosine-protein kinase 100.0 1.9E-32 6.5E-37 295.2 9.2 186 704-914 7-212 (289)
136 2w4o_A Calcium/calmodulin-depe 100.0 3.8E-32 1.3E-36 300.7 11.6 186 704-914 52-244 (349)
137 2qr7_A Ribosomal protein S6 ki 100.0 6.6E-32 2.3E-36 297.5 13.4 186 703-914 20-214 (342)
138 2qol_A Ephrin receptor; recept 100.0 1.9E-32 6.4E-37 305.8 9.1 191 705-913 45-243 (373)
139 1u5q_A Serine/threonine protei 100.0 5.1E-32 1.8E-36 299.3 12.2 184 705-914 54-247 (348)
140 3p1a_A MYT1 kinase, membrane-a 100.0 6.1E-32 2.1E-36 294.4 12.2 187 704-913 56-248 (311)
141 3dls_A PAS domain-containing s 100.0 3.3E-32 1.1E-36 299.4 10.1 190 702-914 21-224 (335)
142 3pfq_A PKC-B, PKC-beta, protei 100.0 6.1E-32 2.1E-36 323.4 13.2 190 703-914 339-536 (674)
143 1ob3_A PFPK5, cell division co 100.0 2.9E-32 9.8E-37 293.7 9.3 187 705-914 2-195 (288)
144 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.3E-31 4.5E-36 285.2 14.4 189 704-914 7-199 (268)
145 3poz_A Epidermal growth factor 100.0 4.9E-32 1.7E-36 297.4 11.2 190 705-914 15-213 (327)
146 3op5_A Serine/threonine-protei 100.0 5.1E-32 1.7E-36 302.0 11.2 201 703-914 33-255 (364)
147 3kn6_A Ribosomal protein S6 ki 100.0 8.1E-32 2.8E-36 295.1 12.6 185 705-914 8-203 (325)
148 4fcg_A Uncharacterized protein 100.0 1.3E-32 4.5E-37 301.4 6.1 285 45-361 22-314 (328)
149 1opk_A P150, C-ABL, proto-onco 100.0 5.5E-32 1.9E-36 313.5 11.6 191 704-914 219-413 (495)
150 4eut_A Serine/threonine-protei 100.0 9.3E-32 3.2E-36 303.2 13.0 192 705-914 9-217 (396)
151 3lxl_A Tyrosine-protein kinase 100.0 1E-31 3.6E-36 294.9 13.1 194 705-914 23-224 (327)
152 3gen_A Tyrosine-protein kinase 100.0 1.4E-31 4.8E-36 287.5 13.8 190 703-914 22-215 (283)
153 1nxk_A MAP kinase-activated pr 100.0 6.6E-32 2.2E-36 304.2 11.7 188 705-914 61-257 (400)
154 3llt_A Serine/threonine kinase 100.0 4.9E-32 1.7E-36 301.9 10.3 197 693-914 23-253 (360)
155 2nru_A Interleukin-1 receptor- 100.0 2.3E-31 7.9E-36 289.5 15.3 204 692-914 12-228 (307)
156 2a2a_A Death-associated protei 100.0 1.3E-31 4.4E-36 293.4 13.4 188 704-914 11-212 (321)
157 3qup_A Tyrosine-protein kinase 100.0 4.2E-32 1.4E-36 297.6 9.3 202 703-913 21-232 (323)
158 4e5w_A Tyrosine-protein kinase 100.0 1.5E-31 5.1E-36 290.2 13.6 194 705-914 21-223 (302)
159 4f0f_A Serine/threonine-protei 100.0 1.3E-31 4.6E-36 288.3 12.9 184 705-914 19-222 (287)
160 3mi9_A Cell division protein k 100.0 1.7E-31 5.7E-36 296.4 13.8 198 704-914 16-223 (351)
161 3kex_A Receptor tyrosine-prote 100.0 5.8E-32 2E-36 296.6 9.9 190 705-914 13-211 (325)
162 2z66_A Variable lymphocyte rec 100.0 1E-31 3.6E-36 292.0 11.7 254 63-333 5-263 (306)
163 1luf_A Muscle-specific tyrosin 100.0 8.6E-32 2.9E-36 297.8 11.2 198 703-914 45-270 (343)
164 3hko_A Calcium/calmodulin-depe 100.0 5.9E-32 2E-36 299.3 9.8 204 699-914 20-270 (345)
165 1x8b_A WEE1HU, WEE1-like prote 100.0 2.4E-31 8.1E-36 286.4 14.2 190 703-914 9-225 (289)
166 2y7j_A Phosphorylase B kinase 100.0 3.1E-31 1.1E-35 295.3 15.5 193 699-914 88-299 (365)
167 3is5_A Calcium-dependent prote 100.0 1.5E-31 5.3E-36 287.4 12.5 191 705-914 22-219 (285)
168 3qyz_A Mitogen-activated prote 100.0 2.1E-31 7E-36 297.1 13.9 195 704-914 26-226 (364)
169 3cok_A Serine/threonine-protei 100.0 1.5E-31 5E-36 286.5 11.9 190 704-914 10-206 (278)
170 3gbz_A Kinase, CMGC CDK; ssgci 100.0 6.4E-32 2.2E-36 296.7 9.2 192 700-914 29-232 (329)
171 3lb7_A RAF proto-oncogene seri 100.0 1.3E-31 4.3E-36 291.2 11.4 188 704-914 35-231 (307)
172 1rjb_A FL cytokine receptor; k 100.0 2.7E-31 9.3E-36 293.9 14.1 198 703-914 43-268 (344)
173 2eue_A Carbon catabolite derep 100.0 1.8E-31 6.3E-36 285.3 12.3 186 705-914 13-206 (275)
174 1cm8_A Phosphorylated MAP kina 100.0 9.9E-32 3.4E-36 299.4 10.6 189 704-914 24-220 (367)
175 2ivs_A Proto-oncogene tyrosine 100.0 1.8E-31 6.2E-36 291.3 12.4 197 704-914 22-246 (314)
176 3ogk_B Coronatine-insensitive 100.0 4.4E-34 1.5E-38 340.8 -9.5 459 63-576 40-548 (592)
177 4agu_A Cyclin-dependent kinase 100.0 2E-31 6.9E-36 290.5 12.3 188 705-914 3-197 (311)
178 1mp8_A Focal adhesion kinase 1 100.0 1.1E-31 3.7E-36 288.1 10.0 189 704-913 14-210 (281)
179 3i6u_A CDS1, serine/threonine- 100.0 9.3E-32 3.2E-36 305.1 10.0 189 702-914 132-338 (419)
180 2owb_A Serine/threonine-protei 100.0 2.9E-31 1E-35 292.3 13.6 189 704-914 40-235 (335)
181 1csn_A Casein kinase-1; phosph 100.0 3.1E-31 1.1E-35 287.0 13.7 194 704-914 9-212 (298)
182 1vzo_A Ribosomal protein S6 ki 100.0 1E-31 3.4E-36 298.2 9.9 190 704-914 53-256 (355)
183 1ua2_A CAK, cell division prot 100.0 9.5E-32 3.3E-36 297.6 9.6 191 702-914 7-207 (346)
184 1qcf_A Haematopoetic cell kina 100.0 1.8E-31 6.3E-36 306.2 12.1 189 704-914 187-379 (454)
185 3lij_A Calcium/calmodulin depe 100.0 2.4E-31 8.3E-36 308.7 13.2 188 704-914 36-231 (494)
186 2rku_A Serine/threonine-protei 100.0 3.5E-31 1.2E-35 286.1 13.4 189 704-914 14-209 (294)
187 3brb_A Proto-oncogene tyrosine 100.0 1.6E-31 5.4E-36 291.6 10.9 208 698-914 27-243 (313)
188 2a19_B Interferon-induced, dou 100.0 1.9E-31 6.4E-36 286.6 11.0 192 703-914 9-215 (284)
189 3mwu_A Calmodulin-domain prote 100.0 2.6E-31 9E-36 308.0 13.1 189 703-914 20-216 (486)
190 1zy4_A Serine/threonine-protei 100.0 2.2E-31 7.6E-36 288.8 11.7 203 703-914 4-225 (303)
191 3kfa_A Tyrosine-protein kinase 100.0 5.4E-32 1.8E-36 291.5 6.8 192 703-914 11-206 (288)
192 3fdn_A Serine/threonine-protei 100.0 1.7E-31 5.9E-36 286.2 10.7 188 703-914 7-201 (279)
193 3tt0_A Basic fibroblast growth 100.0 3.5E-31 1.2E-35 297.1 13.6 197 704-914 68-287 (382)
194 3c1x_A Hepatocyte growth facto 100.0 9E-32 3.1E-36 299.9 8.7 194 705-914 89-290 (373)
195 1k9a_A Carboxyl-terminal SRC k 100.0 3.7E-31 1.3E-35 303.1 13.8 185 704-914 192-380 (450)
196 3kk8_A Calcium/calmodulin depe 100.0 4.2E-31 1.4E-35 283.9 13.4 188 704-914 5-201 (284)
197 2yex_A Serine/threonine-protei 100.0 3.8E-31 1.3E-35 283.0 12.9 192 703-914 5-202 (276)
198 1t4h_A Serine/threonine-protei 100.0 4.6E-31 1.6E-35 284.5 13.3 190 705-914 26-223 (290)
199 3mtl_A Cell division protein k 100.0 7.1E-32 2.4E-36 295.7 7.0 188 705-914 2-195 (324)
200 3f66_A Hepatocyte growth facto 100.0 3.5E-31 1.2E-35 286.7 12.4 194 704-913 24-225 (298)
201 2w1i_A JAK2; chromosomal rearr 100.0 4.7E-31 1.6E-35 289.6 13.5 195 704-914 40-242 (326)
202 1t46_A HOMO sapiens V-KIT hard 100.0 3.2E-31 1.1E-35 289.2 12.0 197 704-914 22-241 (313)
203 3nyv_A Calmodulin-domain prote 100.0 2.7E-31 9.2E-36 308.0 11.8 188 704-914 25-221 (484)
204 2b9h_A MAP kinase FUS3, mitoge 100.0 4.4E-31 1.5E-35 293.3 12.8 200 704-914 10-217 (353)
205 3q5i_A Protein kinase; CDPK, m 100.0 5.2E-31 1.8E-35 306.8 13.9 189 703-914 34-241 (504)
206 3gxj_A TGF-beta receptor type- 100.0 6.4E-32 2.2E-36 293.2 5.7 190 705-914 3-212 (303)
207 3bhy_A Death-associated protei 100.0 7.6E-31 2.6E-35 281.8 14.0 188 704-914 4-205 (283)
208 2v62_A Serine/threonine-protei 100.0 3.4E-31 1.2E-35 293.0 11.7 198 705-914 37-254 (345)
209 2j7t_A Serine/threonine-protei 100.0 2E-31 6.8E-36 289.2 9.5 190 704-914 18-216 (302)
210 2zmd_A Dual specificity protei 100.0 4.6E-31 1.6E-35 296.4 12.7 187 705-914 56-261 (390)
211 2jam_A Calcium/calmodulin-depe 100.0 3.1E-31 1E-35 288.0 10.7 187 704-914 8-201 (304)
212 2buj_A Serine/threonine-protei 100.0 1.5E-31 5.2E-36 292.3 8.3 205 704-914 28-240 (317)
213 2z80_A TOLL-like receptor 2, v 100.0 3.2E-31 1.1E-35 294.3 10.9 281 99-460 29-316 (353)
214 3lzb_A Epidermal growth factor 100.0 3.2E-31 1.1E-35 290.7 10.8 190 705-914 15-213 (327)
215 3eb0_A Putative uncharacterize 100.0 4.5E-31 1.5E-35 296.4 12.2 194 702-914 4-236 (383)
216 2h34_A Serine/threonine-protei 100.0 4.9E-31 1.7E-35 287.0 12.1 191 703-914 32-229 (309)
217 2vgo_A Serine/threonine-protei 100.0 5.7E-31 2E-35 282.9 12.4 187 704-914 13-206 (284)
218 2pvf_A Fibroblast growth facto 100.0 6.4E-31 2.2E-35 289.5 12.8 198 703-914 33-253 (334)
219 3dbq_A Dual specificity protei 100.0 5.5E-31 1.9E-35 291.1 12.1 188 704-914 8-214 (343)
220 3t9t_A Tyrosine-protein kinase 100.0 7.4E-31 2.5E-35 279.2 12.5 189 704-914 7-199 (267)
221 2x7f_A TRAF2 and NCK-interacti 100.0 2.6E-31 8.8E-36 291.7 9.2 201 698-914 17-228 (326)
222 1j1b_A Glycogen synthase kinas 100.0 4.4E-31 1.5E-35 299.6 11.4 191 705-914 54-251 (420)
223 3kmu_A ILK, integrin-linked ki 100.0 4E-31 1.4E-35 281.8 10.4 186 704-914 9-205 (271)
224 4aaa_A Cyclin-dependent kinase 100.0 5.3E-31 1.8E-35 289.8 11.6 189 704-914 24-219 (331)
225 1wwl_A Monocyte differentiatio 100.0 8.1E-33 2.8E-37 301.3 -2.9 246 101-362 43-310 (312)
226 3a7i_A MST3 kinase, serine/thr 100.0 1.2E-30 4E-35 283.3 14.1 187 705-914 22-213 (303)
227 2xrw_A Mitogen-activated prote 100.0 6.9E-31 2.4E-35 293.4 12.6 190 704-914 24-220 (371)
228 1phk_A Phosphorylase kinase; g 100.0 9.4E-31 3.2E-35 283.3 13.2 189 703-914 15-223 (298)
229 3pg1_A Mitogen-activated prote 100.0 5.8E-31 2E-35 293.4 11.9 199 697-914 14-228 (362)
230 2fst_X Mitogen-activated prote 100.0 1.8E-31 6.2E-36 297.0 7.7 189 704-914 28-224 (367)
231 3cc6_A Protein tyrosine kinase 100.0 4.5E-31 1.5E-35 283.3 10.5 189 704-913 11-207 (281)
232 1p4o_A Insulin-like growth fac 100.0 1.5E-31 5.1E-36 293.1 6.9 203 698-914 18-234 (322)
233 2clq_A Mitogen-activated prote 100.0 1.2E-30 4.1E-35 282.0 13.8 190 706-914 23-219 (295)
234 2z66_A Variable lymphocyte rec 100.0 9.1E-31 3.1E-35 284.6 12.8 250 104-363 10-263 (306)
235 3eqc_A Dual specificity mitoge 100.0 3E-31 1E-35 295.5 9.2 188 704-914 32-224 (360)
236 2ycf_A Serine/threonine-protei 100.0 5.6E-31 1.9E-35 288.4 11.2 188 703-914 8-213 (322)
237 3byv_A Rhoptry kinase; malaria 100.0 5.6E-32 1.9E-36 303.1 3.1 195 704-914 72-307 (377)
238 2vuw_A Serine/threonine-protei 100.0 7.7E-32 2.6E-36 297.2 4.1 181 704-909 19-265 (336)
239 2h6d_A 5'-AMP-activated protei 100.0 1.1E-30 3.6E-35 279.5 12.6 188 704-914 10-205 (276)
240 3lm5_A Serine/threonine-protei 100.0 5.7E-31 1.9E-35 288.9 10.6 201 693-914 16-227 (327)
241 1qpc_A LCK kinase; alpha beta 100.0 1.3E-30 4.3E-35 279.5 12.8 189 704-914 12-204 (279)
242 2xir_A Vascular endothelial gr 100.0 4.4E-31 1.5E-35 288.4 9.4 206 696-914 18-244 (316)
243 3nsz_A CK II alpha, casein kin 100.0 1.8E-30 6.1E-35 285.5 14.2 183 705-914 36-225 (330)
244 2i6l_A Mitogen-activated prote 100.0 1.2E-30 4.1E-35 285.5 12.7 194 705-914 11-219 (320)
245 3pls_A Macrophage-stimulating 100.0 7.9E-31 2.7E-35 283.9 11.2 193 706-914 22-222 (298)
246 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 5.2E-31 1.8E-35 302.1 10.2 189 704-914 183-375 (452)
247 4hgt_A Casein kinase I isoform 100.0 1E-30 3.5E-35 282.6 12.0 196 703-914 7-209 (296)
248 2w5a_A Serine/threonine-protei 100.0 3.1E-31 1.1E-35 284.2 7.8 195 704-914 5-210 (279)
249 3ll6_A Cyclin G-associated kin 100.0 8.1E-31 2.8E-35 289.1 11.3 204 704-914 27-247 (337)
250 2i1m_A Macrophage colony-stimu 100.0 4.5E-31 1.5E-35 290.7 9.1 200 701-914 42-260 (333)
251 1mqb_A Ephrin type-A receptor 100.0 6.1E-31 2.1E-35 289.4 10.1 191 705-913 44-243 (333)
252 3com_A Serine/threonine-protei 100.0 1.6E-30 5.5E-35 283.8 13.3 189 703-914 27-219 (314)
253 3dtc_A Mitogen-activated prote 100.0 1E-30 3.4E-35 278.9 11.4 187 704-914 6-208 (271)
254 3uzp_A CKI-delta, CKID, casein 100.0 1.6E-30 5.3E-35 281.2 13.0 195 704-914 8-209 (296)
255 3kvw_A DYRK2, dual specificity 100.0 1.3E-30 4.6E-35 296.3 12.9 186 704-914 96-293 (429)
256 2wtk_C Serine/threonine-protei 100.0 1.5E-30 5.2E-35 282.7 12.8 194 704-914 4-207 (305)
257 2eva_A TAK1 kinase - TAB1 chim 100.0 1.3E-30 4.3E-35 283.5 12.1 186 704-914 7-197 (307)
258 1u59_A Tyrosine-protein kinase 100.0 2.2E-30 7.5E-35 278.8 13.8 191 705-914 9-207 (287)
259 3mdy_A Bone morphogenetic prot 100.0 1.9E-30 6.3E-35 286.3 13.0 196 702-914 34-246 (337)
260 3og7_A AKAP9-BRAF fusion prote 100.0 6.5E-31 2.2E-35 283.2 9.1 188 704-914 23-219 (289)
261 3g06_A SSPH2 (leucine-rich rep 100.0 2.8E-30 9.7E-35 304.0 14.9 292 53-444 10-307 (622)
262 3q60_A ROP5B; pseudokinase, tr 100.0 6.9E-31 2.4E-35 293.6 9.1 191 704-914 61-287 (371)
263 1xbb_A Tyrosine-protein kinase 100.0 2.4E-30 8.1E-35 279.1 13.0 191 704-914 15-214 (291)
264 2wqm_A Serine/threonine-protei 100.0 1.5E-30 5E-35 283.5 11.4 193 704-914 31-230 (310)
265 2h8h_A Proto-oncogene tyrosine 100.0 9.9E-31 3.4E-35 305.8 10.7 189 704-914 266-458 (535)
266 4e7w_A Glycogen synthase kinas 100.0 1.6E-30 5.4E-35 292.7 11.6 190 705-914 40-236 (394)
267 2ozo_A Tyrosine-protein kinase 100.0 1.5E-30 5.1E-35 308.6 12.0 190 706-914 336-533 (613)
268 2r3i_A Cell division protein k 100.0 1.6E-30 5.4E-35 281.7 11.2 189 705-914 3-198 (299)
269 3rgf_A Cyclin-dependent kinase 100.0 9.9E-31 3.4E-35 295.9 10.0 196 705-914 20-230 (405)
270 1fvr_A Tyrosine-protein kinase 100.0 1.5E-30 5.1E-35 285.7 11.1 193 705-914 25-235 (327)
271 3lxp_A Non-receptor tyrosine-p 100.0 2E-30 7E-35 283.4 12.0 191 706-914 32-231 (318)
272 2jii_A Serine/threonine-protei 100.0 7E-31 2.4E-35 291.4 8.3 192 705-914 42-262 (352)
273 3ogk_B Coronatine-insensitive 100.0 2.7E-32 9.1E-37 325.3 -3.7 429 116-600 64-548 (592)
274 3e3p_A Protein kinase, putativ 100.0 3.1E-30 1.1E-34 287.3 13.2 201 698-914 16-226 (360)
275 2yfx_A Tyrosine-protein kinase 100.0 1.1E-30 3.8E-35 286.7 9.4 197 704-914 29-239 (327)
276 4fl3_A Tyrosine-protein kinase 100.0 1.5E-30 5.2E-35 309.2 11.0 184 711-914 375-566 (635)
277 2vwi_A Serine/threonine-protei 100.0 4.9E-31 1.7E-35 286.2 6.1 202 702-914 12-221 (303)
278 1blx_A Cyclin-dependent kinase 100.0 3.4E-30 1.2E-34 282.7 12.8 195 703-914 9-213 (326)
279 1b6c_B TGF-B superfamily recep 100.0 7.2E-30 2.5E-34 282.2 15.0 195 700-914 37-251 (342)
280 3zyi_A Leucine-rich repeat-con 100.0 2E-29 6.8E-34 289.6 18.8 246 104-361 57-303 (452)
281 1byg_A CSK, protein (C-termina 100.0 1.7E-30 5.7E-35 278.3 9.0 185 704-914 20-208 (278)
282 3sv0_A Casein kinase I-like; t 100.0 6.4E-30 2.2E-34 293.2 14.3 194 704-914 6-207 (483)
283 1wwl_A Monocyte differentiatio 100.0 5.3E-32 1.8E-36 294.9 -2.9 250 121-387 39-310 (312)
284 3an0_A Dual specificity mitoge 100.0 3.4E-30 1.2E-34 284.5 11.3 192 704-914 50-251 (340)
285 3zyi_A Leucine-rich repeat-con 100.0 3.4E-29 1.2E-33 287.6 19.2 252 351-609 57-309 (452)
286 2pml_X PFPK7, Ser/Thr protein 100.0 2.3E-30 7.9E-35 286.9 8.8 187 704-914 30-246 (348)
287 3zyj_A Leucine-rich repeat-con 100.0 4.1E-29 1.4E-33 285.9 19.4 253 351-610 46-299 (440)
288 1wak_A Serine/threonine-protei 100.0 3.6E-30 1.2E-34 290.8 10.5 191 704-914 36-287 (397)
289 1u46_A ACK-1, activated CDC42 100.0 4.2E-30 1.4E-34 277.1 10.4 191 705-914 18-218 (291)
290 4exu_A Mitogen-activated prote 100.0 4.6E-30 1.6E-34 286.8 10.8 188 704-914 41-236 (371)
291 3fme_A Dual specificity mitoge 100.0 4E-30 1.4E-34 277.2 9.8 191 704-913 6-206 (290)
292 2wei_A Calmodulin-domain prote 100.0 1.1E-29 3.9E-34 273.2 13.1 190 702-914 19-216 (287)
293 3a99_A Proto-oncogene serine/t 100.0 5.1E-30 1.7E-34 280.4 10.0 188 703-914 41-243 (320)
294 1z57_A Dual specificity protei 100.0 6.5E-30 2.2E-34 282.0 10.5 186 704-914 13-228 (339)
295 2iwi_A Serine/threonine-protei 100.0 3.5E-30 1.2E-34 280.8 7.6 191 700-914 26-233 (312)
296 2pzi_A Probable serine/threoni 100.0 5.1E-30 1.8E-34 309.1 9.6 185 705-913 80-269 (681)
297 3zyj_A Leucine-rich repeat-con 100.0 8.4E-29 2.9E-33 283.3 19.0 242 85-361 51-292 (440)
298 3fhr_A MAP kinase-activated pr 100.0 1.4E-29 4.7E-34 278.9 11.9 188 704-914 27-223 (336)
299 1ozn_A Reticulon 4 receptor; N 100.0 2.9E-29 1E-33 269.6 13.7 250 351-629 14-264 (285)
300 2j0j_A Focal adhesion kinase 1 100.0 1.4E-29 4.7E-34 302.2 11.9 190 703-913 388-585 (656)
301 3coi_A Mitogen-activated prote 100.0 7.5E-30 2.6E-34 283.3 8.7 187 705-914 24-218 (353)
302 2vx3_A Dual specificity tyrosi 100.0 1.9E-29 6.5E-34 283.0 11.9 189 703-914 52-252 (382)
303 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.2E-30 1.5E-34 281.1 5.5 193 702-914 30-237 (319)
304 2eu9_A Dual specificity protei 100.0 2.5E-29 8.7E-34 279.2 10.3 186 704-914 18-233 (355)
305 1q8y_A SR protein kinase; tran 100.0 1.8E-29 6.2E-34 282.6 9.0 190 705-914 19-229 (373)
306 3aln_A Dual specificity mitoge 100.0 3.2E-29 1.1E-33 275.1 10.3 193 704-914 21-223 (327)
307 3cek_A Dual specificity protei 100.0 6.1E-29 2.1E-33 271.1 11.3 192 700-914 23-233 (313)
308 3qa8_A MGC80376 protein; kinas 100.0 1.4E-29 4.8E-34 296.1 6.2 196 704-914 13-217 (676)
309 1ozn_A Reticulon 4 receptor; N 100.0 1.5E-28 5.1E-33 264.1 13.6 253 321-609 14-267 (285)
310 3o53_A Protein LRIM1, AGAP0063 100.0 1.1E-29 3.9E-34 277.1 4.7 265 152-438 13-280 (317)
311 2rio_A Serine/threonine-protei 100.0 2.5E-29 8.7E-34 286.4 7.3 192 706-914 16-233 (434)
312 3p23_A Serine/threonine-protei 100.0 4E-29 1.4E-33 283.9 8.1 187 704-913 23-222 (432)
313 2dyl_A Dual specificity mitoge 100.0 8.9E-29 3E-33 270.4 10.4 188 704-914 24-223 (318)
314 4azs_A Methyltransferase WBDD; 100.0 4.9E-29 1.7E-33 291.8 8.4 177 712-913 241-431 (569)
315 3g06_A SSPH2 (leucine-rich rep 100.0 1.8E-27 6E-32 280.3 21.5 268 102-469 41-308 (622)
316 3o53_A Protein LRIM1, AGAP0063 99.9 1.7E-29 5.8E-34 275.7 3.1 258 174-477 11-270 (317)
317 3uqc_A Probable conserved tran 99.9 4.4E-28 1.5E-32 260.1 11.9 163 705-914 31-196 (286)
318 2o6q_A Variable lymphocyte rec 99.9 2.9E-27 9.8E-32 251.8 17.4 216 62-282 2-217 (270)
319 3dzo_A Rhoptry kinase domain; 99.9 2.1E-28 7.3E-33 276.9 7.8 195 704-914 77-311 (413)
320 3oja_A Leucine-rich immune mol 99.9 2.9E-28 1E-32 281.4 7.8 240 97-356 30-270 (487)
321 3oja_A Leucine-rich immune mol 99.9 2.1E-28 7.2E-33 282.6 6.5 215 375-604 36-251 (487)
322 2p1m_B Transport inhibitor res 99.9 7.4E-31 2.5E-35 313.0 -16.6 460 63-579 33-544 (594)
323 2p1m_B Transport inhibitor res 99.9 2.6E-30 9E-35 308.3 -13.0 451 104-604 46-545 (594)
324 2z62_A TOLL-like receptor 4, v 99.9 1.8E-26 6.3E-31 246.5 17.6 228 353-609 12-243 (276)
325 3m2w_A MAP kinase-activated pr 99.9 4.8E-27 1.6E-31 254.2 11.9 171 705-914 17-192 (299)
326 2z62_A TOLL-like receptor 4, v 99.9 5.2E-26 1.8E-30 243.0 15.4 211 93-307 22-237 (276)
327 2o6q_A Variable lymphocyte rec 99.9 5.5E-25 1.9E-29 234.1 18.0 206 375-608 18-223 (270)
328 3m19_A Variable lymphocyte rec 99.9 3E-25 1E-29 233.4 13.8 192 63-260 3-194 (251)
329 1p9a_G Platelet glycoprotein I 99.9 7E-25 2.4E-29 235.4 15.6 207 394-608 7-213 (290)
330 1p9a_G Platelet glycoprotein I 99.9 5.7E-25 2E-29 236.1 14.6 203 97-307 6-208 (290)
331 3rfs_A Internalin B, repeat mo 99.9 7.8E-25 2.7E-29 233.2 14.4 212 97-320 37-248 (272)
332 3rfs_A Internalin B, repeat mo 99.9 6.8E-25 2.3E-29 233.6 13.9 207 78-296 42-248 (272)
333 3goz_A Leucine-rich repeat-con 99.9 1.4E-26 4.9E-31 257.5 -0.0 274 105-418 2-305 (362)
334 3goz_A Leucine-rich repeat-con 99.9 5.7E-27 2E-31 260.7 -3.2 270 81-370 2-306 (362)
335 3en9_A Glycoprotease, O-sialog 99.9 3.7E-25 1.3E-29 257.5 7.9 174 708-908 339-526 (540)
336 2xwt_C Thyrotropin receptor; s 99.9 7.7E-25 2.6E-29 228.5 9.3 181 102-310 32-221 (239)
337 4glp_A Monocyte differentiatio 99.9 8.5E-25 2.9E-29 237.7 9.2 201 150-361 92-307 (310)
338 2ast_B S-phase kinase-associat 99.9 1.7E-26 5.8E-31 254.4 -4.5 268 62-370 34-315 (336)
339 4glp_A Monocyte differentiatio 99.9 1.3E-24 4.4E-29 236.3 9.6 225 101-332 64-308 (310)
340 2xwt_C Thyrotropin receptor; s 99.9 8.9E-24 3.1E-28 220.4 14.7 200 374-601 32-237 (239)
341 2ca6_A RAN GTPase-activating p 99.9 2E-26 7E-31 258.9 -8.8 249 94-364 25-319 (386)
342 3cvr_A Invasion plasmid antige 99.9 2.2E-24 7.6E-29 250.7 7.7 205 56-291 34-251 (571)
343 2ast_B S-phase kinase-associat 99.9 3.2E-25 1.1E-29 244.2 -1.2 257 102-395 48-315 (336)
344 2ca6_A RAN GTPase-activating p 99.9 3.5E-25 1.2E-29 248.8 -1.3 247 340-607 24-320 (386)
345 4ay9_X Follicle-stimulating ho 99.9 3E-23 1E-27 229.4 14.0 203 65-283 9-215 (350)
346 4ay9_X Follicle-stimulating ho 99.9 3.7E-23 1.3E-27 228.7 13.8 240 104-358 12-256 (350)
347 1h6u_A Internalin H; cell adhe 99.9 3.5E-23 1.2E-27 224.4 12.6 194 98-308 38-231 (308)
348 3m19_A Variable lymphocyte rec 99.9 1.1E-22 3.7E-27 213.8 15.6 182 398-607 15-196 (251)
349 1h6u_A Internalin H; cell adhe 99.9 3.2E-23 1.1E-27 224.7 11.6 205 108-361 26-230 (308)
350 1zar_A RIO2 kinase; serine kin 99.9 3.4E-23 1.2E-27 220.7 11.3 151 699-897 84-252 (282)
351 2o6s_A Variable lymphocyte rec 99.9 3E-22 1E-26 204.0 14.2 186 63-295 5-190 (208)
352 2o6s_A Variable lymphocyte rec 99.9 3.9E-22 1.3E-26 203.2 14.2 185 53-246 4-190 (208)
353 3cvr_A Invasion plasmid antige 99.9 5.5E-22 1.9E-26 230.6 12.6 189 102-319 60-255 (571)
354 4b8c_D Glucose-repressible alc 99.9 5.5E-23 1.9E-27 248.1 3.9 218 33-262 129-358 (727)
355 3e6j_A Variable lymphocyte rec 99.8 6.4E-21 2.2E-25 197.1 13.7 163 57-235 11-173 (229)
356 1dce_A Protein (RAB geranylger 99.8 1.3E-23 4.4E-28 245.8 -7.7 207 122-355 346-567 (567)
357 2v70_A SLIT-2, SLIT homolog 2 99.8 4.4E-21 1.5E-25 196.9 7.2 159 424-610 14-173 (220)
358 1m9s_A Internalin B; cell inva 99.8 1.9E-20 6.4E-25 220.3 12.0 196 104-316 24-219 (605)
359 1dce_A Protein (RAB geranylger 99.8 2.6E-22 9E-27 234.7 -3.9 206 146-380 346-567 (567)
360 2v9t_B SLIT homolog 2 protein 99.8 7.7E-21 2.6E-25 195.1 7.4 159 424-610 14-172 (220)
361 1h6t_A Internalin B; cell adhe 99.8 1.5E-20 5.2E-25 201.8 10.0 171 99-308 44-214 (291)
362 2v70_A SLIT-2, SLIT homolog 2 99.8 4.6E-20 1.6E-24 189.3 11.8 151 81-234 15-166 (220)
363 2v9t_B SLIT homolog 2 protein 99.8 6.9E-20 2.3E-24 188.0 11.8 146 86-234 20-165 (220)
364 1h6t_A Internalin B; cell adhe 99.8 5.8E-20 2E-24 197.2 11.5 168 77-258 46-213 (291)
365 2xot_A Amphoterin-induced prot 99.8 3.1E-20 1E-24 206.1 9.0 181 400-608 21-207 (361)
366 2xot_A Amphoterin-induced prot 99.8 5.3E-20 1.8E-24 204.2 10.0 126 82-210 23-149 (361)
367 1m9s_A Internalin B; cell inva 99.8 1E-19 3.5E-24 214.0 13.0 195 219-461 19-213 (605)
368 3e6j_A Variable lymphocyte rec 99.8 3.8E-19 1.3E-23 183.7 14.0 154 104-261 22-175 (229)
369 4b8c_D Glucose-repressible alc 99.8 4.4E-20 1.5E-24 222.7 5.8 192 101-304 173-369 (727)
370 1zth_A RIO1 serine protein kin 99.8 3.2E-19 1.1E-23 187.7 10.8 138 706-866 48-219 (258)
371 1w8a_A SLIT protein; signaling 99.8 2.1E-19 7.1E-24 180.2 7.0 136 497-632 32-168 (192)
372 1xeu_A Internalin C; cellular 99.8 3E-19 1E-23 188.6 6.8 163 81-258 23-185 (263)
373 1xeu_A Internalin C; cellular 99.8 2.1E-19 7.1E-24 189.8 5.2 151 145-309 37-187 (263)
374 4ezg_A Putative uncharacterize 99.8 4.1E-19 1.4E-23 179.0 6.9 105 100-208 43-147 (197)
375 4ezg_A Putative uncharacterize 99.7 1.1E-18 3.6E-23 176.0 7.1 154 122-307 41-194 (197)
376 3sb4_A Hypothetical leucine ri 99.7 2.3E-18 8E-23 188.5 10.3 101 373-475 226-327 (329)
377 1w8a_A SLIT protein; signaling 99.7 3.6E-18 1.2E-22 171.1 9.5 129 104-235 11-140 (192)
378 2wfh_A SLIT homolog 2 protein 99.7 9.4E-18 3.2E-22 168.1 8.5 113 497-610 34-146 (193)
379 3sb4_A Hypothetical leucine ri 99.7 8.1E-18 2.8E-22 184.1 8.6 287 148-452 24-328 (329)
380 2ell_A Acidic leucine-rich nuc 99.7 2.7E-17 9.2E-22 161.0 8.0 133 100-234 23-160 (168)
381 2je0_A Acidic leucine-rich nuc 99.7 2.8E-17 9.7E-22 157.3 7.2 128 100-229 16-148 (149)
382 2ell_A Acidic leucine-rich nuc 99.7 8.9E-17 3E-21 157.3 7.8 83 149-233 24-107 (168)
383 2wfh_A SLIT homolog 2 protein 99.7 1.8E-16 6.2E-21 158.7 10.1 108 101-209 31-138 (193)
384 2je0_A Acidic leucine-rich nuc 99.6 4.9E-17 1.7E-21 155.7 4.6 128 124-253 16-148 (149)
385 2o6r_A Variable lymphocyte rec 99.6 3.4E-16 1.2E-20 154.5 9.7 112 497-608 31-142 (177)
386 2o6r_A Variable lymphocyte rec 99.6 6E-16 2.1E-20 152.8 10.4 136 63-213 5-140 (177)
387 4gyi_A RIO2 kinase; protein ki 99.6 3.3E-16 1.1E-20 170.5 7.9 136 705-865 95-264 (397)
388 4fdw_A Leucine rich hypothetic 99.6 5.5E-15 1.9E-19 165.2 16.9 253 190-481 129-382 (401)
389 1ds9_A Outer arm dynein; leuci 99.6 1.7E-17 5.8E-22 167.2 -3.2 111 168-283 43-153 (198)
390 1ds9_A Outer arm dynein; leuci 99.6 1.2E-17 4.1E-22 168.4 -5.0 154 123-283 16-185 (198)
391 4fdw_A Leucine rich hypothetic 99.6 1E-14 3.5E-19 162.9 18.2 256 285-603 127-383 (401)
392 1a9n_A U2A', U2A'; complex (nu 99.6 1.6E-15 5.6E-20 149.5 6.6 132 97-234 15-153 (176)
393 4fs7_A Uncharacterized protein 99.6 9E-14 3.1E-18 155.9 20.3 326 168-569 66-391 (394)
394 3g39_A Variable lymphocyte rec 99.6 6.3E-15 2.2E-19 144.2 9.0 109 497-608 12-120 (170)
395 1a9n_A U2A', U2A'; complex (nu 99.5 2.3E-15 7.8E-20 148.5 4.4 133 120-258 14-153 (176)
396 4fs7_A Uncharacterized protein 99.5 2.9E-13 1E-17 151.7 20.9 329 94-473 64-392 (394)
397 2r9u_A Variable lymphocyte rec 99.5 1.7E-14 5.7E-19 141.6 9.0 108 497-607 15-122 (174)
398 2r9u_A Variable lymphocyte rec 99.5 8.2E-14 2.8E-18 136.7 10.3 103 81-186 16-118 (174)
399 3g39_A Variable lymphocyte rec 99.5 9E-14 3.1E-18 135.9 10.3 102 82-186 14-115 (170)
400 2ifg_A High affinity nerve gro 99.4 6.6E-13 2.2E-17 146.3 8.8 109 498-609 12-122 (347)
401 2ifg_A High affinity nerve gro 99.3 1.9E-12 6.6E-17 142.5 9.1 108 65-186 8-116 (347)
402 3un9_A NLR family member X1; l 99.3 4.8E-14 1.6E-18 156.0 -5.3 66 516-581 181-254 (372)
403 4gt6_A Cell surface protein; l 99.3 5.4E-11 1.8E-15 133.2 18.0 85 167-253 57-145 (394)
404 4gt6_A Cell surface protein; l 99.3 1.6E-10 5.6E-15 129.3 21.3 294 264-602 81-390 (394)
405 3un9_A NLR family member X1; l 99.2 2.4E-13 8.2E-18 150.4 -4.2 161 420-605 71-254 (372)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 3.8E-11 1.3E-15 126.5 12.7 148 700-865 9-213 (263)
407 1nd4_A Aminoglycoside 3'-phosp 99.0 3E-10 1E-14 119.3 7.6 138 705-865 20-214 (264)
408 3rw6_A Nuclear RNA export fact 99.0 1.4E-12 4.6E-17 135.5 -12.6 79 171-251 168-257 (267)
409 4h09_A Hypothetical leucine ri 99.0 1.6E-08 5.5E-13 112.4 19.6 165 394-589 191-355 (379)
410 2ra8_A Uncharacterized protein 98.9 7.7E-11 2.6E-15 129.0 -0.7 104 75-181 105-227 (362)
411 2ra8_A Uncharacterized protein 98.9 1.6E-10 5.6E-15 126.4 -0.2 111 101-229 107-227 (362)
412 3dxp_A Putative acyl-COA dehyd 98.9 3.7E-09 1.3E-13 116.6 9.4 145 709-865 42-248 (359)
413 4h09_A Hypothetical leucine ri 98.9 4.6E-08 1.6E-12 108.7 18.3 147 389-565 209-355 (379)
414 3r70_A Aminoglycoside phosphot 98.5 2.8E-07 9.5E-12 99.7 11.8 136 706-865 38-237 (320)
415 3sg8_A APH(2'')-ID; antibiotic 98.5 1.3E-07 4.3E-12 101.6 8.9 139 710-865 25-223 (304)
416 3rw6_A Nuclear RNA export fact 98.5 9.9E-09 3.4E-13 106.4 -0.1 92 169-262 137-237 (267)
417 1io0_A Tropomodulin; LRR prote 98.5 5E-09 1.7E-13 103.5 -4.5 94 93-186 28-136 (185)
418 3tdw_A Gentamicin resistance p 98.3 2.5E-06 8.4E-11 91.5 12.1 137 710-865 24-224 (306)
419 4gkh_A Aminoglycoside 3'-phosp 98.3 3.5E-06 1.2E-10 88.6 12.7 136 712-865 31-223 (272)
420 3d1u_A Putative fructosamine-3 98.3 1.7E-06 5.9E-11 91.6 10.2 77 708-794 18-97 (288)
421 1io0_A Tropomodulin; LRR prote 98.3 3.6E-08 1.2E-12 97.3 -2.8 95 116-210 27-136 (185)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.3E-05 4.4E-10 87.9 11.5 77 708-795 44-122 (362)
423 3ats_A Putative uncharacterize 98.0 1.2E-05 4.1E-10 88.3 8.4 84 710-795 25-121 (357)
424 2olc_A MTR kinase, methylthior 97.9 1.6E-05 5.5E-10 88.6 9.4 76 710-792 35-120 (397)
425 2q83_A YTAA protein; 2635576, 97.5 0.00033 1.1E-08 76.1 10.7 149 711-865 38-252 (346)
426 3e4g_A ATP synthase subunit S, 97.5 4.2E-05 1.4E-09 73.3 2.6 84 518-601 61-150 (176)
427 3e4g_A ATP synthase subunit S, 97.4 1.6E-05 5.3E-10 76.3 -0.8 82 126-207 62-149 (176)
428 3jr1_A Putative fructosamine-3 97.4 0.0008 2.7E-08 71.6 11.6 150 710-872 41-241 (312)
429 3f7w_A Putative fructosamine-3 97.3 0.001 3.5E-08 70.2 12.0 78 706-793 16-96 (288)
430 3rfe_A Platelet glycoprotein I 97.2 0.00036 1.2E-08 63.7 5.8 62 546-609 12-74 (130)
431 3dxq_A Choline/ethanolamine ki 97.2 0.00095 3.2E-08 71.0 9.6 72 709-794 22-95 (301)
432 2pyw_A Uncharacterized protein 97.1 0.00076 2.6E-08 75.5 8.8 31 834-865 231-261 (420)
433 2ppq_A HSK, HK, homoserine kin 96.9 0.0041 1.4E-07 66.7 11.3 169 693-865 5-217 (322)
434 1zyl_A Hypothetical protein YI 96.8 0.0085 2.9E-07 64.3 12.8 167 693-865 9-223 (328)
435 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00027 9.3E-09 69.0 -0.0 15 347-361 97-111 (197)
436 1nw1_A Choline kinase (49.2 KD 96.7 0.0035 1.2E-07 70.1 8.8 73 710-793 78-158 (429)
437 3feg_A Choline/ethanolamine ki 96.6 0.0043 1.5E-07 67.8 8.9 144 711-865 56-254 (379)
438 2qg7_A Ethanolamine kinase PV0 96.6 0.011 3.6E-07 66.5 12.0 75 710-794 113-188 (458)
439 3rfe_A Platelet glycoprotein I 96.5 0.0023 7.8E-08 58.3 5.2 56 522-579 12-68 (130)
440 3csv_A Aminoglycoside phosphot 96.4 0.023 7.8E-07 61.1 12.9 32 834-865 182-217 (333)
441 1pgv_A TMD-1, tropomodulin TMD 96.3 0.00053 1.8E-08 67.0 -0.5 89 393-481 66-169 (197)
442 3c5i_A Choline kinase; choline 96.1 0.0081 2.8E-07 65.7 7.7 73 711-793 39-120 (369)
443 3i1a_A Spectinomycin phosphotr 96.0 0.023 8E-07 61.2 10.4 31 835-865 206-236 (339)
444 3f2s_A CK, chetk-alpha, cholin 95.6 0.039 1.3E-06 60.5 10.3 32 834-865 243-280 (401)
445 3mes_A Choline kinase; malaria 94.0 0.11 3.8E-06 57.4 8.5 73 711-793 76-156 (424)
446 3g15_A CK, chetk-alpha, cholin 88.5 1.2 4E-05 48.9 9.2 30 836-865 245-280 (401)
447 2yle_A Protein spire homolog 1 86.2 0.35 1.2E-05 47.4 2.8 93 792-912 33-128 (229)
448 3cxl_A N-chimerin; SH2, RHO-GA 79.6 0.19 6.5E-06 56.4 -2.4 62 709-773 146-215 (463)
449 4ano_A ESSB; membrane protein, 57.5 14 0.00048 36.1 5.8 52 809-865 81-133 (219)
450 4ann_A ESSB; membrane protein, 47.3 12 0.00041 36.4 3.4 53 808-865 76-128 (215)
451 2lz0_A Uncharacterized protein 37.7 58 0.002 27.2 5.8 45 385-430 8-52 (100)
452 2lz0_A Uncharacterized protein 32.3 47 0.0016 27.8 4.4 42 285-327 11-52 (100)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.6e-87 Score=820.19 Aligned_cols=609 Identities=29% Similarity=0.452 Sum_probs=412.6
Q ss_pred cccCCCCCHhHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccceeecCCCCceEEEecCCCCCccc---cC---------
Q 042766 27 SFSAGQTNETDRLALLAIKSQLHDPSGVTSSWNNTMNFCQWTGVTCGHRHQRLTELNLSSQRIGGV---LS--------- 94 (914)
Q Consensus 27 ~~~~~~~~~~~~~aLl~~k~~~~~~~~~~~~w~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~---~~--------- 94 (914)
.++++++.++|++|||+||+++.||. .+++|+.++|||.|.||+|+ +++|++|||+++++.|. ++
T Consensus 3 ~~~~~~~~~~~~~all~~k~~~~~~~-~l~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L 79 (768)
T 3rgz_A 3 QASPSQSLYREIHQLISFKDVLPDKN-LLPDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGL 79 (768)
T ss_dssp -----CCHHHHHHHHHHHHTTCSCTT-SSTTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTC
T ss_pred cCccccCCHHHHHHHHHHHhhCCCcc-cccCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcc
Confidence 34556678999999999999999888 89999988899999999998 68999999999999886 44
Q ss_pred --------------CCCCCCCCCCEEEcCCCCCcccCCc--ccCCCCCCCeeecCCCCCCCcCCCCc-cccCCcchhccC
Q 042766 95 --------------PYVGNLSFLRYINLADNGFRGDIPQ--EIGNLFRLEKLALSNNSFSGTIPTNL-SRCSNLIHFCAS 157 (914)
Q Consensus 95 --------------~~l~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~Ls 157 (914)
+.++.+++|++|||++|.++|.+|. .++++++|++|||++|.+++.+|..+ +++++|++|||+
T Consensus 80 ~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls 159 (768)
T 3rgz_A 80 ESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159 (768)
T ss_dssp CEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECC
T ss_pred cccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECC
Confidence 5788889999999999999998888 88899999999999888888777665 455555555555
Q ss_pred CCcccCCCChh---c----------------------cccccccccccccccccCcCCcccccccccceeecccCCCCCC
Q 042766 158 NNKLEGQIPKE---I----------------------GNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGK 212 (914)
Q Consensus 158 ~N~l~~~~p~~---~----------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 212 (914)
+|++++..|.. + +.+++|++|+|++|++++.+|. ++++++|++|+|++|.+++.
T Consensus 160 ~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~ 238 (768)
T 3rgz_A 160 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGD 238 (768)
T ss_dssp SSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSC
T ss_pred CCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCc
Confidence 55544333322 1 2334444444444444444443 44444444444444444444
Q ss_pred CCccchhhhc----------------------ccccccccccccCCCCCccccc-cccceeeccCCcccCcccccccccC
Q 042766 213 IPTTLGLLRR----------------------LVNLNVAENQFSGMFPRSICNI-SSVELIFLTENRFSGIFPFDILLNL 269 (914)
Q Consensus 213 ~p~~~~~l~~----------------------L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~~l 269 (914)
+|..++.+++ |++|+|++|++++.+|..+... ++|++|+|++|++++.+|.. +.++
T Consensus 239 ~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~-~~~l 317 (768)
T 3rgz_A 239 FSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPF-FGSC 317 (768)
T ss_dssp HHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGG-GGGC
T ss_pred ccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchH-HhcC
Confidence 4444443333 3333344444444555555553 66777777777776665543 3466
Q ss_pred cccceeeccCccCCCCCCCc-cccccccccccccCccCCccccccccccc-cccceeccCCcCCCCCCCCc---------
Q 042766 270 PNLKKLGIGGNNFVGSIPDS-LSNASNLELLDLPSNQFKGKVSIDFSSLK-NLWLLNLEQNNLGTGTANDL--------- 338 (914)
Q Consensus 270 ~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~--------- 338 (914)
++|++|+|++|++++.+|.. +..+++|++|+|++|++++.+|..+..++ +|++|++++|.+++.....+
T Consensus 318 ~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~ 397 (768)
T 3rgz_A 318 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 397 (768)
T ss_dssp TTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCC
T ss_pred CCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCcc
Confidence 66777777777666666654 66666666666666666666666666665 66666666666543211000
Q ss_pred -----------chhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccC
Q 042766 339 -----------DFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVN 407 (914)
Q Consensus 339 -----------~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 407 (914)
.+|..+.++++|++|+|++|++++.+|..+..+. +|+.|++++|++++.+|..|..+++|++|+|++|
T Consensus 398 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 476 (768)
T 3rgz_A 398 ELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFN 476 (768)
T ss_dssp EEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCT-TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred EEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCC-CCCEEECCCCcccCcCCHHHcCCCCceEEEecCC
Confidence 1334455555555555555555555555555544 4555555555555555555555555555555555
Q ss_pred cccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCch
Q 042766 408 QFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQ 487 (914)
Q Consensus 408 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 487 (914)
++++.+|..+..+++|++|+|++|++++.+|.+++.+++|++|+|++|+++|.+|..++++++|+.|++++|+++|.+|.
T Consensus 477 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~ 556 (768)
T 3rgz_A 477 DLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556 (768)
T ss_dssp CCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCG
T ss_pred cccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCCh
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred hhhcccchh---------------------------------------------hhhcccCCccCCCcccccccccccee
Q 042766 488 QLLSITTLS---------------------------------------------LVLDLSNNLLNGSLPLQVGNLKNLVM 522 (914)
Q Consensus 488 ~~~~~~~l~---------------------------------------------~~L~Ls~N~l~~~~p~~~~~l~~L~~ 522 (914)
.++....+. ..++++.|.+.|.+|..++.+++|+.
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~ 636 (768)
T 3rgz_A 557 AMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 636 (768)
T ss_dssp GGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCE
T ss_pred HHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccE
Confidence 444322110 11233335555555666677889999
Q ss_pred ecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCcc
Q 042766 523 LDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYF 602 (914)
Q Consensus 523 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 602 (914)
||||+|+++|.+|.+|+.+++|+.|+|++|+++|.+|.+|+.+++|+.|||++|+++|.+|..+..+++|++||||+|++
T Consensus 637 LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l 716 (768)
T 3rgz_A 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716 (768)
T ss_dssp EECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEE
T ss_pred EECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcCCCCCccCccCCCCCCCCccCCCCCCCCCCCCCC
Q 042766 603 EGEVPVKGVFSNKTKISLHGNVKLCGGIDELHLPSCPSKGSRK 645 (914)
Q Consensus 603 ~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~l~~~~c~~~~s~~ 645 (914)
+|.||..+++.++...++.||+++||. ++ +.|+......
T Consensus 717 ~g~iP~~~~~~~~~~~~~~gN~~Lcg~--~l--~~C~~~~~~~ 755 (768)
T 3rgz_A 717 SGPIPEMGQFETFPPAKFLNNPGLCGY--PL--PRCDPSNADG 755 (768)
T ss_dssp EEECCSSSSGGGSCGGGGCSCTEEEST--TS--CCCCSCC---
T ss_pred cccCCCchhhccCCHHHhcCCchhcCC--CC--cCCCCCccCC
Confidence 999999999999999999999999997 34 3787555443
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.5e-68 Score=655.17 Aligned_cols=521 Identities=35% Similarity=0.521 Sum_probs=435.9
Q ss_pred CCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCC--CccccCCcchhccCCCcccCCCChhc-cccccc
Q 042766 99 NLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPT--NLSRCSNLIHFCASNNKLEGQIPKEI-GNLLKL 175 (914)
Q Consensus 99 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~l~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L 175 (914)
+|++|+.++++.|++. .+|..++++++|++|||++|.++|.+|. .++++++|++|||++|.+++.+|..+ .++++|
T Consensus 75 ~L~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L 153 (768)
T 3rgz_A 75 SLTGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSL 153 (768)
T ss_dssp TCTTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTC
T ss_pred ccCcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCC
Confidence 3556666666666655 4668999999999999999999999998 99999999999999999999998876 789999
Q ss_pred cccccccccccCcCCcc-------------------------cccccccceeecccCCCCCCCCccchhhhccccccccc
Q 042766 176 QRLSVDINYLTGQLPDS-------------------------VGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAE 230 (914)
Q Consensus 176 ~~L~L~~N~l~~~~p~~-------------------------~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 230 (914)
++|+|++|++++..|.. +.++++|++|+|++|.+++.+|. ++++++|++|+|++
T Consensus 154 ~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~ 232 (768)
T 3rgz_A 154 EVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISG 232 (768)
T ss_dssp SEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCS
T ss_pred CEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcC
Confidence 99999999988766544 25678899999999999998888 99999999999999
Q ss_pred ccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccc-cccccccccCccCCcc
Q 042766 231 NQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNA-SNLELLDLPSNQFKGK 309 (914)
Q Consensus 231 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~ 309 (914)
|++++.+|..|.++++|++|++++|.+++.+|.. .+++|++|+|++|++++.+|..+... ++|++|+|++|++++.
T Consensus 233 n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~---~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~ 309 (768)
T 3rgz_A 233 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL---PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 309 (768)
T ss_dssp SCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC---CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEEC
T ss_pred CcCCCcccHHHhcCCCCCEEECCCCcccCccCcc---ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCc
Confidence 9999999999999999999999999998877753 67888888888888888888877765 8888888888888888
Q ss_pred ccccccccccccceeccCCcCCCCCCCCcchhh-cccCCCCCcEEeccccccCCCcCchhhccc----------------
Q 042766 310 VSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVI-FLSNCSSLKVLSLSDNQFGGELPHSIANLS---------------- 372 (914)
Q Consensus 310 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~-~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~---------------- 372 (914)
+|..|..+++|++|++++|.+++. +|. .+..+++|++|+|++|++++.+|..+..+.
T Consensus 310 ~p~~~~~l~~L~~L~L~~n~l~~~------ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~ 383 (768)
T 3rgz_A 310 VPPFFGSCSLLESLALSSNNFSGE------LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGP 383 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSEEEEE------CCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEE
T ss_pred cchHHhcCCCccEEECCCCcccCc------CCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCC
Confidence 888888888888888888877632 222 256666666666666666666666555443
Q ss_pred ----------cccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCcccc
Q 042766 373 ----------LKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLG 442 (914)
Q Consensus 373 ----------~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 442 (914)
.+|++|++++|++++.+|..|+++++|++|+|++|++++.+|..+..+++|++|+|++|.+++.+|..+.
T Consensus 384 ~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~ 463 (768)
T 3rgz_A 384 ILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM 463 (768)
T ss_dssp CCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGG
T ss_pred cChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHc
Confidence 2467777777777777888888888888888888888888888888888888888888888888888888
Q ss_pred CCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCcccccccccccee
Q 042766 443 NLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVM 522 (914)
Q Consensus 443 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~ 522 (914)
.+++|++|+|++|++++.+|..+.++++|+.|++++|++++.+|.++..++.+ ++|+|++|+++|.+|..++++++|++
T Consensus 464 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-~~L~L~~N~l~~~~p~~l~~l~~L~~ 542 (768)
T 3rgz_A 464 YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL-AILKLSNNSFSGNIPAELGDCRSLIW 542 (768)
T ss_dssp GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTC-CEEECCSSCCEEECCGGGGGCTTCCE
T ss_pred CCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCC-CEEECCCCcccCcCCHHHcCCCCCCE
Confidence 88888888888888888888888888899999999999988888888888887 78899999998888888999999999
Q ss_pred ecccCCccccccCccc----------------------------------------------------------------
Q 042766 523 LDISSNQFSGVIPVTL---------------------------------------------------------------- 538 (914)
Q Consensus 523 L~Ls~N~l~~~~p~~~---------------------------------------------------------------- 538 (914)
|||++|+++|.+|..+
T Consensus 543 L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g 622 (768)
T 3rgz_A 543 LDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGG 622 (768)
T ss_dssp EECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEE
T ss_pred EECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecc
Confidence 9999988887777543
Q ss_pred ------cccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCC-Cc
Q 042766 539 ------STCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVK-GV 611 (914)
Q Consensus 539 ------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~ 611 (914)
+.+++|++|||++|+++|.+|.+|+.++.|+.|||++|+++|.+|+.++++++|+.||||+|+++|.+|.. ..
T Consensus 623 ~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~ 702 (768)
T 3rgz_A 623 HTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 702 (768)
T ss_dssp ECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGG
T ss_pred cCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhC
Confidence 33567889999999999999999999999999999999999999999999999999999999999999865 55
Q ss_pred CCCCCccCccCCCCCCCCccC
Q 042766 612 FSNKTKISLHGNVKLCGGIDE 632 (914)
Q Consensus 612 ~~~~~~~~~~~n~~lc~~~~~ 632 (914)
+..+..+++++| .+.|.+|.
T Consensus 703 l~~L~~L~ls~N-~l~g~iP~ 722 (768)
T 3rgz_A 703 LTMLTEIDLSNN-NLSGPIPE 722 (768)
T ss_dssp CCCCSEEECCSS-EEEEECCS
T ss_pred CCCCCEEECcCC-cccccCCC
Confidence 677888888888 45666543
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.5e-63 Score=601.13 Aligned_cols=549 Identities=21% Similarity=0.198 Sum_probs=471.5
Q ss_pred CceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhcc
Q 042766 77 QRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCA 156 (914)
Q Consensus 77 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 156 (914)
.+++.|+|++|.+++..+..++++++|++|+|++|.+++..|..++++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 57999999999999877778999999999999999999999999999999999999999999555557999999999999
Q ss_pred CCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccch--hhhccccccccccccc
Q 042766 157 SNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLG--LLRRLVNLNVAENQFS 234 (914)
Q Consensus 157 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~ 234 (914)
++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|++++|.+++..|..++ .+++|++|++++|+++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999987788999999999999999999999999999999999999999999988887765 4589999999999999
Q ss_pred CCCCCcccccc---------------------------ccceeeccCCcccCcccccccccCcc--cceeeccCccCCCC
Q 042766 235 GMFPRSICNIS---------------------------SVELIFLTENRFSGIFPFDILLNLPN--LKKLGIGGNNFVGS 285 (914)
Q Consensus 235 ~~~p~~~~~l~---------------------------~L~~L~L~~N~l~~~~p~~~~~~l~~--L~~L~Ls~N~l~~~ 285 (914)
+..|..|..+. +|+.|++++|.+++..|.. +.+++. |++|+|++|++++.
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~-~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT-FLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTT-TGGGGGSCCCEEECTTSCCCEE
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhH-hhccCcCCCCEEECCCCCcCcc
Confidence 99888877654 5667777777777665543 345544 88899999988888
Q ss_pred CCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhh----cccCCCCCcEEeccccccC
Q 042766 286 IPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVI----FLSNCSSLKVLSLSDNQFG 361 (914)
Q Consensus 286 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~----~l~~l~~L~~L~Ls~N~l~ 361 (914)
.|..|..+++|++|+|++|++++..+..|.++++|++|++++|....... ...+|. .+..+++|++|++++|+++
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~-~~~lp~i~~~~~~~l~~L~~L~l~~n~l~ 342 (680)
T 1ziw_A 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSIS-LASLPKIDDFSFQWLKCLEHLNMEDNDIP 342 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC-------CCEECTTTTTTCTTCCEEECCSCCBC
T ss_pred CcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccc-cccccccChhhcccCCCCCEEECCCCccC
Confidence 88888888889999999998888888888888889988888775442100 000121 4678899999999999999
Q ss_pred CCcCchhhccccccEEEEeecccccc--cCCccccCC--CCCcEEEcccCcccccCChhhhcccCCceeeeccccccccc
Q 042766 362 GELPHSIANLSLKMIELSVGRNQISG--TIPPGIRNL--VNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGI 437 (914)
Q Consensus 362 ~~~p~~~~~~~~~L~~L~L~~N~l~~--~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 437 (914)
+..|..+..+. +|++|++++|.+.. ..+..|..+ ++|+.|++++|++++..|..|..+++|++|+|++|.+++.+
T Consensus 343 ~~~~~~~~~l~-~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 421 (680)
T 1ziw_A 343 GIKSNMFTGLI-NLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 421 (680)
T ss_dssp CCCTTTTTTCT-TCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEEC
T ss_pred CCChhHhcccc-CCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCcccc
Confidence 87777777776 69999999987543 333445544 58999999999999999999999999999999999998876
Q ss_pred C-ccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccC--CCCchhhhcccchhhhhcccCCccCCCccccc
Q 042766 438 P-SGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLT--GDLPQQLLSITTLSLVLDLSNNLLNGSLPLQV 514 (914)
Q Consensus 438 p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~ 514 (914)
| ..|.++++|++|+|++|++++..+..|..+++|+.|++++|.++ +.+|..+..+..+ ++|++++|++++..|..|
T Consensus 422 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L-~~L~Ls~N~l~~i~~~~~ 500 (680)
T 1ziw_A 422 TGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNL-TILDLSNNNIANINDDML 500 (680)
T ss_dssp CSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTC-CEEECCSSCCCCCCTTTT
T ss_pred CcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCC-CEEECCCCCCCcCChhhh
Confidence 6 67899999999999999999889999999999999999999987 6788889888888 899999999998888889
Q ss_pred cccccceeecccCCccccccC--------ccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccc
Q 042766 515 GNLKNLVMLDISSNQFSGVIP--------VTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFL 586 (914)
Q Consensus 515 ~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 586 (914)
.++++|++|+|++|++++..+ ..|.++++|++|+|++|+++...+..|..+++|+.|+|++|+|++..+..|
T Consensus 501 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~ 580 (680)
T 1ziw_A 501 EGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVF 580 (680)
T ss_dssp TTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred ccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHh
Confidence 999999999999999987633 237889999999999999997666789999999999999999998888888
Q ss_pred cccCCCCeEeCCCCccccccCCC-C-cCCCCCccCccCCCCCCCC
Q 042766 587 ENLSFLEFLNLSYNYFEGEVPVK-G-VFSNKTKISLHGNVKLCGG 629 (914)
Q Consensus 587 ~~l~~L~~L~ls~N~l~~~~p~~-~-~~~~~~~~~~~~n~~lc~~ 629 (914)
..+++|+.|+|++|++++..|.. . .+.++..+.+.+||+.|..
T Consensus 581 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 581 NNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp TTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred CCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCC
Confidence 99999999999999999876643 2 4678888999999999964
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1e-60 Score=580.39 Aligned_cols=524 Identities=21% Similarity=0.228 Sum_probs=466.3
Q ss_pred CceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhcc
Q 042766 77 QRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCA 156 (914)
Q Consensus 77 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 156 (914)
.+++.|+|++|.+.+..|..++++++|++|+|++|.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 46899999999999888888999999999999999999655557999999999999999999777789999999999999
Q ss_pred CCCcccCCCChhccccccccccccccccccCcCCcccc--cccccceeecccCCCCCCCCccchhh--------------
Q 042766 157 SNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVG--NLSAIEVIRITENSLGGKIPTTLGLL-------------- 220 (914)
Q Consensus 157 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l-------------- 220 (914)
++|++++..|..++++++|++|+|++|.+++..|..++ .+++|+.|++++|.+++..|..|+.+
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~ 208 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLG 208 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCH
T ss_pred CCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccC
Confidence 99999999899999999999999999999987777665 45899999999999999888887765
Q ss_pred -------------hcccccccccccccCCCCCccccccc--cceeeccCCcccCcccccccccCcccceeeccCccCCCC
Q 042766 221 -------------RRLVNLNVAENQFSGMFPRSICNISS--VELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGS 285 (914)
Q Consensus 221 -------------~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~ 285 (914)
++|+.|++++|++++..|..|.+++. |+.|++++|++++..| ..+..+++|++|+|++|++.+.
T Consensus 209 ~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~ 287 (680)
T 1ziw_A 209 PSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGN-DSFAWLPQLEYFFLEYNNIQHL 287 (680)
T ss_dssp HHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSCCBSEE
T ss_pred hhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCc-ccccCcccccEeeCCCCccCcc
Confidence 45778888999999999999998876 9999999999997655 4566999999999999999999
Q ss_pred CCCccccccccccccccCccCCc---------cccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEecc
Q 042766 286 IPDSLSNASNLELLDLPSNQFKG---------KVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLS 356 (914)
Q Consensus 286 ~p~~~~~l~~L~~L~Ls~N~l~~---------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls 356 (914)
.|..|.++++|++|++++|...+ +....|..+++|++|++++|.+++. .+..+.++++|++|+++
T Consensus 288 ~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~------~~~~~~~l~~L~~L~Ls 361 (680)
T 1ziw_A 288 FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGI------KSNMFTGLINLKYLSLS 361 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCC------CTTTTTTCTTCCEEECT
T ss_pred ChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCC------ChhHhccccCCcEEECC
Confidence 99999999999999999986553 2233788999999999999999987 34467899999999999
Q ss_pred ccccCCC-cCc-hhhccc-cccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCC-hhhhcccCCceeeecccc
Q 042766 357 DNQFGGE-LPH-SIANLS-LKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIP-DVISELKNLQQLSVFNNF 432 (914)
Q Consensus 357 ~N~l~~~-~p~-~~~~~~-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~ 432 (914)
+|.+... ++. .+..+. .+++.|++++|++++..|.+|..+++|++|+|++|++++.+| ..|.++++|++|++++|+
T Consensus 362 ~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~ 441 (680)
T 1ziw_A 362 NSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNK 441 (680)
T ss_dssp TCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCS
T ss_pred CCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCC
Confidence 9986533 232 232222 369999999999999999999999999999999999997665 789999999999999999
Q ss_pred cccccCccccCCCCCCeEEeeCCcCC--CCCCCccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCc
Q 042766 433 LRGGIPSGLGNLTKLGSLDLGSNSLQ--GNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSL 510 (914)
Q Consensus 433 l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~ 510 (914)
+.+..+..|..+++|+.|++++|.++ +.+|..|.++++|+.|++++|++++..|..+..+..+ ++|++++|++++..
T Consensus 442 l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~~L~Ls~N~l~~~~ 520 (680)
T 1ziw_A 442 YLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKL-EILDLQHNNLARLW 520 (680)
T ss_dssp EEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCGGGG
T ss_pred cceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcccccc-CEEeCCCCCccccc
Confidence 99999999999999999999999997 5789999999999999999999997666678888888 89999999998643
Q ss_pred c--------ccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCcccccc
Q 042766 511 P--------LQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKI 582 (914)
Q Consensus 511 p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 582 (914)
+ ..|.++++|++|+|++|+++.+++..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|+|++..
T Consensus 521 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~ 600 (680)
T 1ziw_A 521 KHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVE 600 (680)
T ss_dssp STTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCC
T ss_pred hhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccC
Confidence 2 24789999999999999999777778999999999999999999988888999999999999999999998
Q ss_pred Ccccc-ccCCCCeEeCCCCccccccCC
Q 042766 583 PEFLE-NLSFLEFLNLSYNYFEGEVPV 608 (914)
Q Consensus 583 p~~~~-~l~~L~~L~ls~N~l~~~~p~ 608 (914)
|..+. .+++|+.|++++|+|.|.|+.
T Consensus 601 ~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 601 KKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp HHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred hhHhcccccccCEEEccCCCcccCCcc
Confidence 88887 789999999999999999986
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.2e-60 Score=572.01 Aligned_cols=518 Identities=20% Similarity=0.165 Sum_probs=417.6
Q ss_pred CceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhcc
Q 042766 77 QRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCA 156 (914)
Q Consensus 77 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 156 (914)
..++.|||++|.+++..|..++++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 35778888888887766777888888888888888888777777888888888888888887777778888888888888
Q ss_pred CCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhccc--cccccccccc
Q 042766 157 SNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLV--NLNVAENQFS 234 (914)
Q Consensus 157 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~--~L~Ls~N~l~ 234 (914)
++|++++..|..++++++|++|+|++|++++..+..+..+++|++|++++|.+++..|..|+.+++|+ .|++++|+++
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 88888766567777888888888888888764433444478888888888888877777788888877 7788888888
Q ss_pred CCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCC-----CCCCCcccccc--ccccccccCccCC
Q 042766 235 GMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFV-----GSIPDSLSNAS--NLELLDLPSNQFK 307 (914)
Q Consensus 235 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~--~L~~L~Ls~N~l~ 307 (914)
+..|..|.. .+|+.|++++|.. ++ ..+..+.++....+..+.+. ...+..|..+. +|+.|++++|+++
T Consensus 193 ~~~~~~~~~-~~L~~L~l~~~~~---~~-~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~ 267 (606)
T 3t6q_A 193 GIEPGAFDS-AVFQSLNFGGTQN---LL-VIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFF 267 (606)
T ss_dssp EECTTTTTT-CEEEEEECTTCSC---HH-HHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCS
T ss_pred ccChhHhhh-ccccccccCCchh---HH-HHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccC
Confidence 776666554 5778888877752 11 12223443333333222222 12233444443 7889999999999
Q ss_pred ccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccc
Q 042766 308 GKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISG 387 (914)
Q Consensus 308 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~ 387 (914)
+..+..|..+++|++|++++|.++.+ |..+.++++|++|++++|++++..|..+..++ +|++|++++|.+.+
T Consensus 268 ~~~~~~~~~l~~L~~L~l~~n~l~~l-------p~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~~~~ 339 (606)
T 3t6q_A 268 NISSNTFHCFSGLQELDLTATHLSEL-------PSGLVGLSTLKKLVLSANKFENLCQISASNFP-SLTHLSIKGNTKRL 339 (606)
T ss_dssp SCCTTTTTTCTTCSEEECTTSCCSCC-------CSSCCSCTTCCEEECTTCCCSBGGGGCGGGCT-TCSEEECCSCSSCC
T ss_pred ccCHHHhccccCCCEEeccCCccCCC-------ChhhcccccCCEEECccCCcCcCchhhhhccC-cCCEEECCCCCccc
Confidence 88888899999999999999988854 44577888999999999999877777777776 69999999998887
Q ss_pred cCCc-cccCCCCCcEEEcccCcccccC--ChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCC-
Q 042766 388 TIPP-GIRNLVNLITFTLEVNQFHGTI--PDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPS- 463 (914)
Q Consensus 388 ~~p~-~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~- 463 (914)
.+|. .+..+++|++|++++|++++.. +..+..+++|++|++++|.+.+..|..|..+++|++|++++|++++..|.
T Consensus 340 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 419 (606)
T 3t6q_A 340 ELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQS 419 (606)
T ss_dssp BCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCC
T ss_pred ccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccch
Confidence 6665 4889999999999999998776 77888999999999999999988888899999999999999999877654
Q ss_pred ccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCC---ccccccccccceeecccCCccccccCccccc
Q 042766 464 SLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGS---LPLQVGNLKNLVMLDISSNQFSGVIPVTLST 540 (914)
Q Consensus 464 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 540 (914)
.+.++++|+.|++++|.+++..|..+..++.+ ++|++++|++++. .+..+..+++|++|+|++|++++.+|..|+.
T Consensus 420 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 498 (606)
T 3t6q_A 420 PFQNLHLLKVLNLSHSLLDISSEQLFDGLPAL-QHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTS 498 (606)
T ss_dssp TTTTCTTCCEEECTTCCCBTTCTTTTTTCTTC-CEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTT
T ss_pred hhhCcccCCEEECCCCccCCcCHHHHhCCCCC-CEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhcc
Confidence 48889999999999999988888888888887 7899999998863 3367899999999999999999999999999
Q ss_pred cccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCC
Q 042766 541 CVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVK 609 (914)
Q Consensus 541 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 609 (914)
+++|++|+|++|++++.+|..|..++.| .|+|++|++++.+|..+..+++|+.|++++|++.|.|+..
T Consensus 499 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 566 (606)
T 3t6q_A 499 LKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNI 566 (606)
T ss_dssp CTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGH
T ss_pred ccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcH
Confidence 9999999999999999999999999999 9999999999999999999999999999999999999854
No 6
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.1e-61 Score=580.81 Aligned_cols=502 Identities=22% Similarity=0.276 Sum_probs=377.1
Q ss_pred CCCHhHHHHHHHHHHhcCCC-CC-------CCCCCCCCCCCCCc---cceeecCCCCceEEEecCCCCCccccCCCCCCC
Q 042766 32 QTNETDRLALLAIKSQLHDP-SG-------VTSSWNNTMNFCQW---TGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNL 100 (914)
Q Consensus 32 ~~~~~~~~aLl~~k~~~~~~-~~-------~~~~w~~~~~~c~w---~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l 100 (914)
+....|+.||.+||+++.++ .. ...+|+.+.|||.| .||+|+.. ++|+.|+|+++++.|.+|+++++|
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L 104 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQL 104 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGC
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcC
Confidence 44667999999999998643 22 23489988999999 99999765 899999999999999999999999
Q ss_pred CCCCEEEcCCCCC------cc------cCCcccCCCCCCCeeecCCCCCCCcCCCCccc-cCCcchhccCCCcccCCCCh
Q 042766 101 SFLRYINLADNGF------RG------DIPQEIGNLFRLEKLALSNNSFSGTIPTNLSR-CSNLIHFCASNNKLEGQIPK 167 (914)
Q Consensus 101 ~~L~~L~L~~n~l------~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~-l~~L~~L~Ls~N~l~~~~p~ 167 (914)
++|++|+|++|.+ .| .+|... +..|+ +++++|.+.+.+|..++. +..+..+++....+..
T Consensus 105 ~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~---- 177 (636)
T 4eco_A 105 TELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK---- 177 (636)
T ss_dssp TTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC----
T ss_pred ccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc----
Confidence 9999999999977 33 455544 55677 888888888888877763 4456666666544431
Q ss_pred hccccccccccccc--cccccCcCCcccccccccceeecccCCCCCC-----------------CCccch--hhhccccc
Q 042766 168 EIGNLLKLQRLSVD--INYLTGQLPDSVGNLSAIEVIRITENSLGGK-----------------IPTTLG--LLRRLVNL 226 (914)
Q Consensus 168 ~~~~l~~L~~L~L~--~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L 226 (914)
.....++.+++. .|+++| +|.+|+++++|++|+|++|.+++. +|..++ ++++|++|
T Consensus 178 --~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L 254 (636)
T 4eco_A 178 --SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDV 254 (636)
T ss_dssp --CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE
T ss_pred --ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEE
Confidence 122344444443 688888 888899999999999999998885 888888 99999999
Q ss_pred ccccccccCCCCCccccccccceeeccCCc-ccC-cccccccccC------cccceeeccCccCCCCCCC--cccccccc
Q 042766 227 NVAENQFSGMFPRSICNISSVELIFLTENR-FSG-IFPFDILLNL------PNLKKLGIGGNNFVGSIPD--SLSNASNL 296 (914)
Q Consensus 227 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~~l------~~L~~L~Ls~N~l~~~~p~--~~~~l~~L 296 (914)
+|++|++.+.+|..|+++++|++|++++|+ ++| .+|..+. ++ ++|++|+|++|+++ .+|. .++++++|
T Consensus 255 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~-~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L 332 (636)
T 4eco_A 255 EVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQ-ALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKL 332 (636)
T ss_dssp EEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHH-HHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTC
T ss_pred EecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHH-hhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCC
Confidence 999999999999999999999999999998 888 7786654 44 89999999999999 7888 89999999
Q ss_pred ccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCC-CcEEeccccccCCCcCchhhccc-cc
Q 042766 297 ELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSS-LKVLSLSDNQFGGELPHSIANLS-LK 374 (914)
Q Consensus 297 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~-L~~L~Ls~N~l~~~~p~~~~~~~-~~ 374 (914)
++|+|++|+++|.+| .|..+++|++|++++|.++. +|..+..+++ |++|++++|+++ .+|..+.... .+
T Consensus 333 ~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~-------lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~ 403 (636)
T 4eco_A 333 GMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITE-------IPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSV 403 (636)
T ss_dssp CEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEE-------CCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSC
T ss_pred CEEeCcCCcCccchh-hhCCCCCCCEEECCCCcccc-------ccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCc
Confidence 999999999998888 89999999999999999884 4555788888 999999999998 7887766553 26
Q ss_pred cEEEEeecccccccCCcccc-------CCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCcc-ccCCC-
Q 042766 375 MIELSVGRNQISGTIPPGIR-------NLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSG-LGNLT- 445 (914)
Q Consensus 375 L~~L~L~~N~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~- 445 (914)
|+.|++++|++++.+|..|. .+.+|++|+|++|++++..+..+..+++|++|+|++|+++ .+|.. +....
T Consensus 404 L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~ 482 (636)
T 4eco_A 404 MSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENE 482 (636)
T ss_dssp EEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTE
T ss_pred cCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccc
Confidence 88888888888888888887 7778888888888888655556667888888888888888 44543 33222
Q ss_pred ------CCCeEEeeCCcCCCCCCCccC--CCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCcccccccc
Q 042766 446 ------KLGSLDLGSNSLQGNIPSSLG--NCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNL 517 (914)
Q Consensus 446 ------~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l 517 (914)
+|++|+|++|+++ .+|..+. .+++|+.|++++|+++ + +|..+.++
T Consensus 483 ~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~-------------------------~-ip~~~~~l 535 (636)
T 4eco_A 483 NFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFS-------------------------K-FPTQPLNS 535 (636)
T ss_dssp ECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCS-------------------------S-CCCGGGGC
T ss_pred cccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCC-------------------------C-cChhhhcC
Confidence 6777777777776 4555554 5555555555555444 3 34445555
Q ss_pred ccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeC
Q 042766 518 KNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNL 597 (914)
Q Consensus 518 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 597 (914)
++|+.|+|++|+ ++++|++.+.+|..|..+++|++|+|++|++ +.+|..+. ++|+.|||
T Consensus 536 ~~L~~L~Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~L 594 (636)
T 4eco_A 536 STLKGFGIRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDI 594 (636)
T ss_dssp SSCCEEECCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEEC
T ss_pred CCCCEEECCCCc------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEEC
Confidence 666666665544 3345556666666666666666666666666 35555544 56666666
Q ss_pred CCCcccc
Q 042766 598 SYNYFEG 604 (914)
Q Consensus 598 s~N~l~~ 604 (914)
++|++.+
T Consensus 595 s~N~l~~ 601 (636)
T 4eco_A 595 KDNPNIS 601 (636)
T ss_dssp CSCTTCE
T ss_pred cCCCCcc
Confidence 6666553
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.4e-59 Score=562.75 Aligned_cols=515 Identities=21% Similarity=0.228 Sum_probs=455.8
Q ss_pred CceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhcc
Q 042766 77 QRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCA 156 (914)
Q Consensus 77 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 156 (914)
.+++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 57899999999998887888999999999999999999888889999999999999999999888999999999999999
Q ss_pred CCCcccCCCChhccccccccccccccccccC-cCCcccccccccceeecccCCCCCCCCccchhhhccc----ccccccc
Q 042766 157 SNNKLEGQIPKEIGNLLKLQRLSVDINYLTG-QLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLV----NLNVAEN 231 (914)
Q Consensus 157 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~Ls~N 231 (914)
++|++++..|..|+++++|++|+|++|++++ .+|..|+++++|++|++++|.+++..|..|+.+++|+ +|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 9999997777889999999999999999986 6799999999999999999999998899999998876 7999999
Q ss_pred cccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCC------CCCcccccc--ccccccc-c
Q 042766 232 QFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGS------IPDSLSNAS--NLELLDL-P 302 (914)
Q Consensus 232 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~------~p~~~~~l~--~L~~L~L-s 302 (914)
++++..+..+... +|+.|++++|.+++......+.++++|+.+++..+.+.+. .+..+..+. +++.+++ .
T Consensus 192 ~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 192 PIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred CcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence 9997777666655 8999999999998655556667899999988876655431 122222222 4666777 7
Q ss_pred CccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeec
Q 042766 303 SNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGR 382 (914)
Q Consensus 303 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~ 382 (914)
.|.+++..|. |..+++|+.|++++|.+...+ .+..+++|+.|++++|++ +.+|. + .+. +|+.|++++
T Consensus 271 ~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~--------~l~~~~~L~~L~l~~n~l-~~lp~-~-~l~-~L~~L~l~~ 337 (606)
T 3vq2_A 271 TNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE--------DVPKHFKWQSLSIIRCQL-KQFPT-L-DLP-FLKSLTLTM 337 (606)
T ss_dssp CTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC--------CCCTTCCCSEEEEESCCC-SSCCC-C-CCS-SCCEEEEES
T ss_pred cccccccccc-cccCCCCCEEEecCccchhhh--------hccccccCCEEEcccccC-ccccc-C-CCC-ccceeeccC
Confidence 8889988887 999999999999999997763 467889999999999999 58884 4 444 799999999
Q ss_pred ccccccCCccccCCCCCcEEEcccCccccc--CChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCC
Q 042766 383 NQISGTIPPGIRNLVNLITFTLEVNQFHGT--IPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGN 460 (914)
Q Consensus 383 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 460 (914)
|...+.. .+..+++|++|++++|++++. .|..+..+++|++|++++|.+++ +|..|..+++|+.|++++|++++.
T Consensus 338 n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~ 414 (606)
T 3vq2_A 338 NKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRV 414 (606)
T ss_dssp CSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEEST
T ss_pred CcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCc
Confidence 9766544 678999999999999999977 48999999999999999999995 668899999999999999999988
Q ss_pred CC-CccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCC-CccccccccccceeecccCCccccccCccc
Q 042766 461 IP-SSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNG-SLPLQVGNLKNLVMLDISSNQFSGVIPVTL 538 (914)
Q Consensus 461 ~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 538 (914)
.| ..+.++++|+.|++++|++++..|..+..+..+ ++|++++|.+++ .+|..|+.+++|+.|+|++|++++.+|..|
T Consensus 415 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 493 (606)
T 3vq2_A 415 TEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSL-NTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVF 493 (606)
T ss_dssp TTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC-CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cChhhhhccccCCEEECcCCCCCccchhhhcCCCCC-CEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhh
Confidence 88 789999999999999999999999999999888 899999999998 478999999999999999999999999999
Q ss_pred cccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccC-CCCeEeCCCCccccccCCCC
Q 042766 539 STCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLS-FLEFLNLSYNYFEGEVPVKG 610 (914)
Q Consensus 539 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~~~~p~~~ 610 (914)
+.+++|++|+|++|++++.+|..|..+++|++|+|++|+|+ .+|..+..++ +|++|++++|++.|.++..+
T Consensus 494 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~ 565 (606)
T 3vq2_A 494 DTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQK 565 (606)
T ss_dssp TTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTHH
T ss_pred cccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccHH
Confidence 99999999999999999999999999999999999999999 6777798887 59999999999999999753
No 8
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-59 Score=579.75 Aligned_cols=522 Identities=20% Similarity=0.179 Sum_probs=455.2
Q ss_pred CCccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccC-CcccCCCCCCCeeecCCCCCCCcCCC
Q 042766 65 CQWTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDI-PQEIGNLFRLEKLALSNNSFSGTIPT 143 (914)
Q Consensus 65 c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~ 143 (914)
|.|..|-+ ...+++.|||++|.+++..+..+.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|++++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 57888877 4578999999999999988999999999999999999877777 78899999999999999999988899
Q ss_pred CccccCCcchhccCCCcccCCCChh--ccccccccccccccccccCcCC-cccccccccceeecccCCCCCCCCccchhh
Q 042766 144 NLSRCSNLIHFCASNNKLEGQIPKE--IGNLLKLQRLSVDINYLTGQLP-DSVGNLSAIEVIRITENSLGGKIPTTLGLL 220 (914)
Q Consensus 144 ~l~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 220 (914)
.|+++++|++|+|++|.+++.+|.. |+++++|++|+|++|++++..| ..|+++++|++|+|++|.+++..|..++.+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 9999999999999999999877775 9999999999999999998765 579999999999999999999999999988
Q ss_pred --hcccccccccccccCCCCCccccccc------cceeeccCCcccCcccccccccC--cccceeeccC---------cc
Q 042766 221 --RRLVNLNVAENQFSGMFPRSICNISS------VELIFLTENRFSGIFPFDILLNL--PNLKKLGIGG---------NN 281 (914)
Q Consensus 221 --~~L~~L~Ls~N~l~~~~p~~~~~l~~------L~~L~L~~N~l~~~~p~~~~~~l--~~L~~L~Ls~---------N~ 281 (914)
++|+.|+|++|.+.+..|..+..+.+ |+.|++++|.+++..|..+...+ ++++.|.++. |+
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 89999999999999999888877766 99999999999988776655332 5677888773 34
Q ss_pred CCCCCCCccccc--cccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccc
Q 042766 282 FVGSIPDSLSNA--SNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQ 359 (914)
Q Consensus 282 l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~ 359 (914)
+.+..+..|..+ ++|+.|+|++|.+++..+..|..+++|+.|+|++|++++. .+..+.++++|++|+|++|+
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~------~~~~~~~l~~L~~L~Ls~N~ 325 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKI------ADEAFYGLDNLQVLNLSYNL 325 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEE------CTTTTTTCSSCCEEEEESCC
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCC------ChHHhcCCCCCCEEECCCCC
Confidence 444445556655 7899999999999999999999999999999999999877 34457899999999999999
Q ss_pred cCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCc
Q 042766 360 FGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPS 439 (914)
Q Consensus 360 l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 439 (914)
+++..|..+..++ +|+.|++++|++.+..+..|.++++|++|+|++|.+++... +++|+.|++++|+++ .+|.
T Consensus 326 l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~-----~~~L~~L~l~~N~l~-~l~~ 398 (844)
T 3j0a_A 326 LGELYSSNFYGLP-KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHF-----IPSIPDIFLSGNKLV-TLPK 398 (844)
T ss_dssp CSCCCSCSCSSCT-TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSS-----CCSCSEEEEESCCCC-CCCC
T ss_pred CCccCHHHhcCCC-CCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccC-----CCCcchhccCCCCcc-cccc
Confidence 9988888888877 79999999999999888999999999999999999985432 789999999999998 5554
Q ss_pred cccCCCCCCeEEeeCCcCCCCC-CCccCCCCCccccccCCCccCCCCchh-hhcccchhhhhcccCCccC-----CCccc
Q 042766 440 GLGNLTKLGSLDLGSNSLQGNI-PSSLGNCQNLILFIASYNKLTGDLPQQ-LLSITTLSLVLDLSNNLLN-----GSLPL 512 (914)
Q Consensus 440 ~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~l~~~L~Ls~N~l~-----~~~p~ 512 (914)
. ..+++.|++++|++++.. +..+.++++|+.|++++|++++..+.. +..+..+ +.|+|++|.++ +..|.
T Consensus 399 ~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L-~~L~Ls~N~l~~~~~~~~~~~ 474 (844)
T 3j0a_A 399 I---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSL-EQLFLGENMLQLAWETELCWD 474 (844)
T ss_dssp C---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTC-CBCEEESCCCSSSCCSCCCSS
T ss_pred c---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCcc-ccccCCCCccccccccccchh
Confidence 3 467999999999998642 234568999999999999998655443 3334555 89999999997 45567
Q ss_pred cccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCC
Q 042766 513 QVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFL 592 (914)
Q Consensus 513 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 592 (914)
.|.++++|+.|+|++|++++.+|..|..+++|+.|+|++|+|++.+|..+. ++|+.|||++|+|++.+|+.+. +|
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L 549 (844)
T 3j0a_A 475 VFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SL 549 (844)
T ss_dssp CSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SC
T ss_pred hhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---Cc
Confidence 789999999999999999999999999999999999999999998888776 8999999999999999998764 68
Q ss_pred CeEeCCCCccccccCCCC
Q 042766 593 EFLNLSYNYFEGEVPVKG 610 (914)
Q Consensus 593 ~~L~ls~N~l~~~~p~~~ 610 (914)
+.|++++|++.|.|+..+
T Consensus 550 ~~l~l~~Np~~C~c~~~~ 567 (844)
T 3j0a_A 550 SVLDITHNKFICECELST 567 (844)
T ss_dssp CEEEEEEECCCCSSSCCS
T ss_pred CEEEecCCCcccccccHH
Confidence 999999999999998653
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2e-59 Score=561.37 Aligned_cols=529 Identities=19% Similarity=0.200 Sum_probs=460.8
Q ss_pred ecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCccc
Q 042766 83 NLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLE 162 (914)
Q Consensus 83 ~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 162 (914)
+..+.+++ .+|..+.. .+++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|+++
T Consensus 18 ~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~ 94 (606)
T 3t6q_A 18 NCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLI 94 (606)
T ss_dssp ECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCS
T ss_pred ECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCccc
Confidence 34444553 45655543 7899999999999888999999999999999999999888999999999999999999999
Q ss_pred CCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccc
Q 042766 163 GQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSIC 242 (914)
Q Consensus 163 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 242 (914)
+..|..|+++++|++|+|++|++++..|..++++++|++|++++|.+++..+..+..+++|++|++++|++++..|..|.
T Consensus 95 ~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 174 (606)
T 3t6q_A 95 FMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMS 174 (606)
T ss_dssp EECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHH
T ss_pred ccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhh
Confidence 88899999999999999999999987788899999999999999999975544555599999999999999998899999
Q ss_pred cccccc--eeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccC-----Ccccccccc
Q 042766 243 NISSVE--LIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQF-----KGKVSIDFS 315 (914)
Q Consensus 243 ~l~~L~--~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-----~~~~~~~~~ 315 (914)
.+++|+ .|++++|.+++..|. .+ ...+|++|++++|. .++..+..+.++....+..+.+ ..+.+..|.
T Consensus 175 ~l~~L~~l~L~l~~n~l~~~~~~-~~-~~~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~ 249 (606)
T 3t6q_A 175 SLQQATNLSLNLNGNDIAGIEPG-AF-DSAVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFE 249 (606)
T ss_dssp TTTTCCSEEEECTTCCCCEECTT-TT-TTCEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGG
T ss_pred hhcccceeEEecCCCccCccChh-Hh-hhccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhHhc
Confidence 999999 899999999987654 44 55789999999997 3445555555444433333222 233445555
Q ss_pred ccc--cccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccc
Q 042766 316 SLK--NLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGI 393 (914)
Q Consensus 316 ~l~--~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~ 393 (914)
++. +|+.|++++|.++..+ +..+..+++|++|++++|+++ .+|..+..+. +|++|++++|.+++..|..+
T Consensus 250 ~l~~~~L~~L~l~~n~l~~~~------~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~-~L~~L~l~~n~l~~~~~~~~ 321 (606)
T 3t6q_A 250 GLCEMSVESINLQKHYFFNIS------SNTFHCFSGLQELDLTATHLS-ELPSGLVGLS-TLKKLVLSANKFENLCQISA 321 (606)
T ss_dssp GGGGSEEEEEECTTCCCSSCC------TTTTTTCTTCSEEECTTSCCS-CCCSSCCSCT-TCCEEECTTCCCSBGGGGCG
T ss_pred hhhcCceeEEEeecCccCccC------HHHhccccCCCEEeccCCccC-CCChhhcccc-cCCEEECccCCcCcCchhhh
Confidence 555 7999999999999874 345789999999999999999 8898888776 79999999999999999999
Q ss_pred cCCCCCcEEEcccCcccccCCh-hhhcccCCceeeeccccccccc--CccccCCCCCCeEEeeCCcCCCCCCCccCCCCC
Q 042766 394 RNLVNLITFTLEVNQFHGTIPD-VISELKNLQQLSVFNNFLRGGI--PSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQN 470 (914)
Q Consensus 394 ~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 470 (914)
..+++|++|++++|++.+.+|. .+..+++|++|++++|.+++.. |..+..+++|++|++++|++++..|..|.++++
T Consensus 322 ~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 401 (606)
T 3t6q_A 322 SNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQ 401 (606)
T ss_dssp GGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTT
T ss_pred hccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCcc
Confidence 9999999999999999976655 5999999999999999999776 788999999999999999999999999999999
Q ss_pred ccccccCCCccCCCCchh-hhcccchhhhhcccCCccCCCccccccccccceeecccCCccccc---cCccccccccccE
Q 042766 471 LILFIASYNKLTGDLPQQ-LLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGV---IPVTLSTCVSLEY 546 (914)
Q Consensus 471 L~~L~l~~N~l~~~~p~~-~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~ 546 (914)
|+.|++++|++++..|.. +..+..+ ++|++++|.+++..|..++.+++|++|+|++|++++. .+..+..+++|++
T Consensus 402 L~~L~l~~n~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~ 480 (606)
T 3t6q_A 402 LELLDLAFTRLKVKDAQSPFQNLHLL-KVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEI 480 (606)
T ss_dssp CSEEECTTCCEECCTTCCTTTTCTTC-CEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCE
T ss_pred CCeEECCCCcCCCcccchhhhCcccC-CEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccE
Confidence 999999999999887765 6677777 8999999999999999999999999999999999873 3367999999999
Q ss_pred EEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCC-CcCCCCCccCccCCCC
Q 042766 547 LDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVK-GVFSNKTKISLHGNVK 625 (914)
Q Consensus 547 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~ 625 (914)
|+|++|++++.+|.+|..+++|++|+|++|++++.+|+.+..++.| .|++++|++++.+|.. ..+..+..+.+.+||+
T Consensus 481 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 559 (606)
T 3t6q_A 481 LVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPL 559 (606)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCE
T ss_pred EECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCc
Confidence 9999999999999999999999999999999999999999999999 9999999999877753 4567788899999999
Q ss_pred CCCC
Q 042766 626 LCGG 629 (914)
Q Consensus 626 lc~~ 629 (914)
.|..
T Consensus 560 ~c~c 563 (606)
T 3t6q_A 560 DCTC 563 (606)
T ss_dssp ECSG
T ss_pred cccC
Confidence 8843
No 10
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.1e-59 Score=569.29 Aligned_cols=507 Identities=19% Similarity=0.204 Sum_probs=360.2
Q ss_pred CCCCCHhHHHHHHHHHHhcCCCCCCCCCCCCCC-----CC--CCc------------cceeecCCCCceEEEecCCCCCc
Q 042766 30 AGQTNETDRLALLAIKSQLHDPSGVTSSWNNTM-----NF--CQW------------TGVTCGHRHQRLTELNLSSQRIG 90 (914)
Q Consensus 30 ~~~~~~~~~~aLl~~k~~~~~~~~~~~~w~~~~-----~~--c~w------------~gv~C~~~~~~v~~l~l~~~~l~ 90 (914)
++++..+|+.||++||+++.+| +|+.+. +| |.| .||+|+. +++|+.|+|+++++.
T Consensus 263 ~~~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~ 336 (876)
T 4ecn_A 263 ETAEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAK 336 (876)
T ss_dssp CCCHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCE
T ss_pred ccccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCC
Confidence 3345678999999999999776 786543 55 999 9999976 689999999999999
Q ss_pred cccCCCCCCCCCCCEEEc-CCCCCcccCCcccCCCC-CCCe--------------eec-CCCCCC-----------CcCC
Q 042766 91 GVLSPYVGNLSFLRYINL-ADNGFRGDIPQEIGNLF-RLEK--------------LAL-SNNSFS-----------GTIP 142 (914)
Q Consensus 91 ~~~~~~l~~l~~L~~L~L-~~n~l~~~~p~~~~~l~-~L~~--------------L~L-s~N~l~-----------~~~p 142 (914)
|.+|+++++|++|++|+| ++|.++|..|....... .+.. ++. ....++ ...+
T Consensus 337 G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 337 GRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp EEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred CcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 999999999999999999 89999988654322110 0000 000 000000 0111
Q ss_pred CCccccCCcchhccCC--CcccCCCChhccccccccccccccccccC-----------------cCCcccc--cccccce
Q 042766 143 TNLSRCSNLIHFCASN--NKLEGQIPKEIGNLLKLQRLSVDINYLTG-----------------QLPDSVG--NLSAIEV 201 (914)
Q Consensus 143 ~~l~~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~L~~ 201 (914)
........++.+.+.. |++++ +|..|+++++|++|+|++|+++| .+|+.++ ++++|++
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~ 495 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTD 495 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred cccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCE
Confidence 1222333445555544 66766 67777777777777777777776 3777776 8888888
Q ss_pred eecccCCCCCCCCccchhhhccccccccccc-ccC-CCCCcccccc-------ccceeeccCCcccCcccc-cccccCcc
Q 042766 202 IRITENSLGGKIPTTLGLLRRLVNLNVAENQ-FSG-MFPRSICNIS-------SVELIFLTENRFSGIFPF-DILLNLPN 271 (914)
Q Consensus 202 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~-~~~~~l~~ 271 (914)
|+|++|.+.+.+|..|+++++|++|+|++|+ ++| .+|..+++++ +|++|+|++|+++ .+|. ..+.++++
T Consensus 496 L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~ 574 (876)
T 4ecn_A 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVK 574 (876)
T ss_dssp EEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTT
T ss_pred EECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCC
Confidence 8888888877888888888888888888887 777 6777666655 8888888888887 5665 24557888
Q ss_pred cceeeccCccCCCCCCCccccccccccccccCccCCcccccccccccc-ccceeccCCcCCCCCCCCcchhhcccCCC--
Q 042766 272 LKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKN-LWLLNLEQNNLGTGTANDLDFVIFLSNCS-- 348 (914)
Q Consensus 272 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~~~~l~~l~-- 348 (914)
|++|+|++|+++ .+| .|+.+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|.++.+ |..+..++
T Consensus 575 L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~l-------p~~~~~~~~~ 644 (876)
T 4ecn_A 575 LGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYI-------PNIFNAKSVY 644 (876)
T ss_dssp CCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSC-------CSCCCTTCSS
T ss_pred CCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcC-------chhhhccccC
Confidence 888888888887 677 7888888888888888888 66667888887 88888888887754 33344444
Q ss_pred CCcEEeccccccCCCcCchh---hcc-ccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhc-----
Q 042766 349 SLKVLSLSDNQFGGELPHSI---ANL-SLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISE----- 419 (914)
Q Consensus 349 ~L~~L~Ls~N~l~~~~p~~~---~~~-~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~----- 419 (914)
+|+.|+|++|++++.+|... ..+ ..+|+.|++++|+++...+..+..+++|+.|+|++|+++...+..+..
T Consensus 645 ~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l 724 (876)
T 4ecn_A 645 VMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNY 724 (876)
T ss_dssp CEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCC
T ss_pred CCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccc
Confidence 48888888888887665432 111 126888999999988443344568899999999999998433333332
Q ss_pred --ccCCceeeecccccccccCcccc--CCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCchhhhcccch
Q 042766 420 --LKNLQQLSVFNNFLRGGIPSGLG--NLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTL 495 (914)
Q Consensus 420 --l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l 495 (914)
+++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+.++++|+.|++++|+
T Consensus 725 ~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~--------------- 787 (876)
T 4ecn_A 725 KNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR--------------- 787 (876)
T ss_dssp TTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB---------------
T ss_pred cccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC---------------
Confidence 338999999999999 7888887 89999999999999997 78888899999888888776
Q ss_pred hhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccC
Q 042766 496 SLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSS 575 (914)
Q Consensus 496 ~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 575 (914)
++++|++.+.+|..|.++++|+.|+|++|++ +.+|..+. ++|+.|||++|++....+..|.....+..+.|++
T Consensus 788 ----~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~ 860 (876)
T 4ecn_A 788 ----DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLY 860 (876)
T ss_dssp ----CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEEC
T ss_pred ----CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecC
Confidence 4556666666666666677777777777776 45555544 4666666666666555555554444444444444
Q ss_pred Ccc
Q 042766 576 NNL 578 (914)
Q Consensus 576 N~l 578 (914)
|++
T Consensus 861 n~~ 863 (876)
T 4ecn_A 861 DKT 863 (876)
T ss_dssp CTT
T ss_pred CCc
Confidence 443
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-57 Score=563.88 Aligned_cols=523 Identities=19% Similarity=0.172 Sum_probs=456.0
Q ss_pred EEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcC-CCCccccCCcchhccCCC
Q 042766 81 ELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTI-PTNLSRCSNLIHFCASNN 159 (914)
Q Consensus 81 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~Ls~N 159 (914)
..|.++++++. +|. -.++|++|||++|.+++..|..|+++++|++|||++|.+.+.+ |..|+++++|++|+|++|
T Consensus 8 ~~dcs~~~L~~-vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLTQ-VPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSSC-CCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCCC-CCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 34556777764 555 4589999999999999999999999999999999999877777 788999999999999999
Q ss_pred cccCCCChhccccccccccccccccccCcCCcc--cccccccceeecccCCCCCCCC-ccchhhhcccccccccccccCC
Q 042766 160 KLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDS--VGNLSAIEVIRITENSLGGKIP-TTLGLLRRLVNLNVAENQFSGM 236 (914)
Q Consensus 160 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ 236 (914)
++++..|+.|+++++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..| ..|+++++|++|+|++|++++.
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~ 163 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV 163 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC
T ss_pred cCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee
Confidence 999889999999999999999999999877765 9999999999999999998765 5899999999999999999999
Q ss_pred CCCccccc--cccceeeccCCcccCcccccccccCc------ccceeeccCccCCCCCCCccccc---ccccccccc---
Q 042766 237 FPRSICNI--SSVELIFLTENRFSGIFPFDILLNLP------NLKKLGIGGNNFVGSIPDSLSNA---SNLELLDLP--- 302 (914)
Q Consensus 237 ~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~~l~------~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls--- 302 (914)
.|..+..+ ++|+.|+++.|.+.+..|..+. .++ +|++|+|++|++++..|..+... ++++.|+++
T Consensus 164 ~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~-~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~ 242 (844)
T 3j0a_A 164 CEHELEPLQGKTLSFFSLAANSLYSRVSVDWG-KCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHI 242 (844)
T ss_dssp CSGGGHHHHHCSSCCCEECCSBSCCCCCCCCC-SSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSC
T ss_pred CHHHcccccCCccceEECCCCccccccccchh-hcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccc
Confidence 99999988 8999999999999988776543 444 49999999999998888877654 567777776
Q ss_pred ------CccCCcccccccccc--ccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccc
Q 042766 303 ------SNQFKGKVSIDFSSL--KNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLK 374 (914)
Q Consensus 303 ------~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 374 (914)
.|.+.+.....|.++ ++|+.|++++|.+... .+..+..+++|+.|+|++|++++..|..+..+. +
T Consensus 243 ~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~------~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~-~ 315 (844)
T 3j0a_A 243 MGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSL------NSRVFETLKDLKVLNLAYNKINKIADEAFYGLD-N 315 (844)
T ss_dssp CBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEE------CSCCSSSCCCCCEEEEESCCCCEECTTTTTTCS-S
T ss_pred ccccccccccCCCChhhhhccccCCccEEECCCCccccc------ChhhhhcCCCCCEEECCCCcCCCCChHHhcCCC-C
Confidence 455566666677776 7899999999999876 345678999999999999999988888888776 7
Q ss_pred cEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeC
Q 042766 375 MIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGS 454 (914)
Q Consensus 375 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 454 (914)
|++|++++|++++..|..|.++++|++|+|++|++.+..+..|..+++|++|+|++|.+++. + .+++|+.|++++
T Consensus 316 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-~----~~~~L~~L~l~~ 390 (844)
T 3j0a_A 316 LQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-H----FIPSIPDIFLSG 390 (844)
T ss_dssp CCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-S----SCCSCSEEEEES
T ss_pred CCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-c----CCCCcchhccCC
Confidence 99999999999999999999999999999999999998888999999999999999999853 2 378999999999
Q ss_pred CcCCCCCCCccCCCCCccccccCCCccCCCC-chhhhcccchhhhhcccCCccCCCccc-cccccccceeecccCCccc-
Q 042766 455 NSLQGNIPSSLGNCQNLILFIASYNKLTGDL-PQQLLSITTLSLVLDLSNNLLNGSLPL-QVGNLKNLVMLDISSNQFS- 531 (914)
Q Consensus 455 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~~~~l~~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~- 531 (914)
|+++ .+|.. ..+++.+++++|++++.- +..+..++.+ +.|+|++|++++..+. .+..+++|+.|+|++|.++
T Consensus 391 N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~ 465 (844)
T 3j0a_A 391 NKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHL-QILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQL 465 (844)
T ss_dssp CCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTC-CEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSS
T ss_pred CCcc-ccccc---ccccceeecccCccccCchhhhhhcCCcc-ceeeCCCCcccccccccccccCCccccccCCCCcccc
Confidence 9998 55654 467889999999998532 2334467777 8999999999976543 4567899999999999997
Q ss_pred ----cccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccC
Q 042766 532 ----GVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVP 607 (914)
Q Consensus 532 ----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 607 (914)
+..|..|.++++|+.|+|++|++++.+|..|..+++|+.|+|++|+|++..|..+. ++|+.|||++|++++.+|
T Consensus 466 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~ 543 (844)
T 3j0a_A 466 AWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNP 543 (844)
T ss_dssp SCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCS
T ss_pred ccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCCh
Confidence 45567789999999999999999999999999999999999999999988887776 899999999999999988
Q ss_pred CCCcCCCCCccCccCCCCCCCC
Q 042766 608 VKGVFSNKTKISLHGNVKLCGG 629 (914)
Q Consensus 608 ~~~~~~~~~~~~~~~n~~lc~~ 629 (914)
.. +..+..+++.+||+.|..
T Consensus 544 ~~--~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 544 DV--FVSLSVLDITHNKFICEC 563 (844)
T ss_dssp CC--CSSCCEEEEEEECCCCSS
T ss_pred hH--hCCcCEEEecCCCccccc
Confidence 54 668888999999999953
No 12
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.2e-57 Score=545.84 Aligned_cols=526 Identities=19% Similarity=0.179 Sum_probs=458.6
Q ss_pred EEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCc
Q 042766 81 ELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNK 160 (914)
Q Consensus 81 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 160 (914)
.++.++++++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|+
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 4566677775 4666554 889999999999998888899999999999999999998889999999999999999999
Q ss_pred ccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCC-CCCccchhhhcccccccccccccCCCCC
Q 042766 161 LEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGG-KIPTTLGLLRRLVNLNVAENQFSGMFPR 239 (914)
Q Consensus 161 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 239 (914)
+++..|..|+++++|++|+|++|++++..|..++++++|++|++++|.+++ .+|..|+++++|++|+|++|++++..|.
T Consensus 92 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred ccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 998889999999999999999999998887899999999999999999986 6799999999999999999999999999
Q ss_pred ccccccccc----eeeccCCcccCcccccccccCcccceeeccCccCC-CCCCCccccccccccccccCccCCcc-----
Q 042766 240 SICNISSVE----LIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFV-GSIPDSLSNASNLELLDLPSNQFKGK----- 309 (914)
Q Consensus 240 ~~~~l~~L~----~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~----- 309 (914)
.|..+.+|+ +|++++|.+++. |...+.. .+|++|++++|.+. +..|..+.++++|+.+++..+.+.+.
T Consensus 172 ~~~~l~~L~~~l~~L~l~~n~l~~~-~~~~~~~-~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~ 249 (606)
T 3vq2_A 172 DLQFLRENPQVNLSLDMSLNPIDFI-QDQAFQG-IKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEI 249 (606)
T ss_dssp TTHHHHHCTTCCCEEECTTCCCCEE-CTTTTTT-CEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSC
T ss_pred hhhhhhccccccceeeccCCCccee-CcccccC-ceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccc
Confidence 999988876 799999999865 5455544 49999999999987 46778899999999999877665432
Q ss_pred -ccccccccc--cccceec-cCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccc
Q 042766 310 -VSIDFSSLK--NLWLLNL-EQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQI 385 (914)
Q Consensus 310 -~~~~~~~l~--~L~~L~L-~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l 385 (914)
.+..+.++. +++.+++ ..|.+.+. .|. +..+++|+.|++++|.+. .+| .+..+. +|+.|++++|.+
T Consensus 250 ~~~~~~~~l~~l~l~~l~l~~~~~~~~~------~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~-~L~~L~l~~n~l 319 (606)
T 3vq2_A 250 FEPSIMEGLCDVTIDEFRLTYTNDFSDD------IVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHF-KWQSLSIIRCQL 319 (606)
T ss_dssp CCGGGGTTGGGSEEEEEEECCCTTCCGG------GGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTC-CCSEEEEESCCC
T ss_pred cChHHhhhhhhccHhheecccccccccc------ccc-cccCCCCCEEEecCccch-hhh-hccccc-cCCEEEcccccC
Confidence 233333333 3445555 55666554 444 788999999999999997 567 666655 799999999999
Q ss_pred cccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccc--cCccccCCCCCCeEEeeCCcCCCCCCC
Q 042766 386 SGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGG--IPSGLGNLTKLGSLDLGSNSLQGNIPS 463 (914)
Q Consensus 386 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 463 (914)
+.+| .+ .+++|++|++++|+..+.. .+..+++|++|++++|.+++. +|..+..+++|++|+|++|.+++ +|.
T Consensus 320 -~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~ 393 (606)
T 3vq2_A 320 -KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSA 393 (606)
T ss_dssp -SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECC
T ss_pred -cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chh
Confidence 6788 55 9999999999999766544 577999999999999999976 48889999999999999999985 678
Q ss_pred ccCCCCCccccccCCCccCCCCc-hhhhcccchhhhhcccCCccCCCccccccccccceeecccCCcccc-ccCcccccc
Q 042766 464 SLGNCQNLILFIASYNKLTGDLP-QQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSG-VIPVTLSTC 541 (914)
Q Consensus 464 ~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l 541 (914)
.+.++++|+.|++++|++++..| ..+..+..+ ++|++++|.+.+..|..++++++|++|+|++|++++ .+|..|+.+
T Consensus 394 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l 472 (606)
T 3vq2_A 394 NFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKL-LYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANT 472 (606)
T ss_dssp CCTTCTTCCEEECTTSEEESTTTTTTTTTCTTC-CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTC
T ss_pred hccCCCCCCeeECCCCccCCccChhhhhccccC-CEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccC
Confidence 99999999999999999998887 577778887 899999999999999999999999999999999998 589999999
Q ss_pred ccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCC-CcCC-CCCccC
Q 042766 542 VSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVK-GVFS-NKTKIS 619 (914)
Q Consensus 542 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~-~~~~~~ 619 (914)
++|++|+|++|++++.+|..|..+++|++|+|++|++++.+|..+..+++|+.||+++|+++. +|.. ..+. ++..+.
T Consensus 473 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~ 551 (606)
T 3vq2_A 473 TNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFN 551 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEE
T ss_pred CCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999994 5543 3443 578889
Q ss_pred ccCCCCCCCC
Q 042766 620 LHGNVKLCGG 629 (914)
Q Consensus 620 ~~~n~~lc~~ 629 (914)
+.+|++.|..
T Consensus 552 l~~N~~~c~c 561 (606)
T 3vq2_A 552 LTNNSVACIC 561 (606)
T ss_dssp CCSCCCCCSS
T ss_pred ccCCCcccCC
Confidence 9999999854
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=9.5e-55 Score=514.51 Aligned_cols=494 Identities=17% Similarity=0.163 Sum_probs=381.9
Q ss_pred CCCccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCC
Q 042766 64 FCQWTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPT 143 (914)
Q Consensus 64 ~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 143 (914)
.|.|.|| |+. ++++++ .+|+.+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|.
T Consensus 3 ~C~~~~~-c~~----------~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CDG----------RSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EEC----------TTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EEC----------CCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 5999998 854 345554 4666654 7999999999999998899999999999999999999988889
Q ss_pred CccccCCcchhccCCCcccCCCChhccccccccccccccccccC-cCCcccccccccceeecccCCCCCCCC-ccchhhh
Q 042766 144 NLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTG-QLPDSVGNLSAIEVIRITENSLGGKIP-TTLGLLR 221 (914)
Q Consensus 144 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~ 221 (914)
.|+++++|++|+|++|++++..|..|+++++|++|+|++|++++ ..|..++++++|++|++++|.+.+.+| ..|++++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~ 148 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT 148 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccc
Confidence 99999999999999999998888889999999999999999997 467889999999999999999554554 6899999
Q ss_pred cccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCC--C-Ccccccccccc
Q 042766 222 RLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSI--P-DSLSNASNLEL 298 (914)
Q Consensus 222 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~--p-~~~~~l~~L~~ 298 (914)
+|++|++++|++++..|..+..+++|++|+++.|.+. .+|...+..+++|++|++++|++++.. | .....+++|+.
T Consensus 149 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~ 227 (549)
T 2z81_A 149 SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKK 227 (549)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCE
T ss_pred ccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccc
Confidence 9999999999999999999999999999999999986 456666667999999999999999752 2 23456789999
Q ss_pred ccccCccCCccccc----cccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcC----chhhc
Q 042766 299 LDLPSNQFKGKVSI----DFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELP----HSIAN 370 (914)
Q Consensus 299 L~Ls~N~l~~~~~~----~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p----~~~~~ 370 (914)
|++++|++++..+. .+..+++|+.+++++|.+.+...-.......+..+++|+.|+++++.+..... ..+..
T Consensus 228 L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~ 307 (549)
T 2z81_A 228 LAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYS 307 (549)
T ss_dssp EEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHH
T ss_pred eeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhh
Confidence 99999999876543 34667889999999998877533211122335677888888888887653110 01112
Q ss_pred cccccEEEEeecccccccCCccc-cCCCCCcEEEcccCcccccCChh---hhcccCCceeeecccccccccC--ccccCC
Q 042766 371 LSLKMIELSVGRNQISGTIPPGI-RNLVNLITFTLEVNQFHGTIPDV---ISELKNLQQLSVFNNFLRGGIP--SGLGNL 444 (914)
Q Consensus 371 ~~~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~---~~~l~~L~~L~L~~N~l~~~~p--~~~~~l 444 (914)
...+++.|++++|++. .+|..+ .++++|++|+|++|++++.+|.. +..+++|++|+|++|++++..+ ..+..+
T Consensus 308 ~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l 386 (549)
T 2z81_A 308 LLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTL 386 (549)
T ss_dssp HSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGC
T ss_pred hcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcC
Confidence 2235666666666665 344443 45666666666666666555332 5556666666666666664322 345666
Q ss_pred CCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeec
Q 042766 445 TKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLD 524 (914)
Q Consensus 445 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 524 (914)
++|++|+|++|+++ .+|..+..+++|+.|++++|+++ . +|..+ .++|++||
T Consensus 387 ~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~-------------------------l~~~~--~~~L~~L~ 437 (549)
T 2z81_A 387 KNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-V-------------------------VKTCI--PQTLEVLD 437 (549)
T ss_dssp TTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-C-------------------------CCTTS--CTTCSEEE
T ss_pred CCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-c-------------------------ccchh--cCCceEEE
Confidence 66666666666666 45656666666666666666554 1 22222 14789999
Q ss_pred ccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCcccc
Q 042766 525 ISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEG 604 (914)
Q Consensus 525 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 604 (914)
|++|++++.+ ..+++|++|+|++|+++ .+|. ...+++|++|||++|++++.+|..+..+++|+.|++++|++.|
T Consensus 438 Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 511 (549)
T 2z81_A 438 VSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 511 (549)
T ss_dssp CCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCC
T ss_pred CCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccC
Confidence 9999998753 57889999999999998 5665 5679999999999999999999999999999999999999999
Q ss_pred ccCC
Q 042766 605 EVPV 608 (914)
Q Consensus 605 ~~p~ 608 (914)
.||.
T Consensus 512 ~~~~ 515 (549)
T 2z81_A 512 SCPR 515 (549)
T ss_dssp CHHH
T ss_pred CCcc
Confidence 9984
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.3e-53 Score=502.03 Aligned_cols=494 Identities=20% Similarity=0.207 Sum_probs=384.2
Q ss_pred CceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhcc
Q 042766 77 QRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCA 156 (914)
Q Consensus 77 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 156 (914)
.+++.|||++|.+++..+..+.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+.+++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46888899998888777778888999999999999888777788888899999999999888777788888999999999
Q ss_pred CCCcccCCCChhccccccccccccccccccC-cCCcccccccccceeecccCCCCCCCCccchhhhcc----cccccccc
Q 042766 157 SNNKLEGQIPKEIGNLLKLQRLSVDINYLTG-QLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRL----VNLNVAEN 231 (914)
Q Consensus 157 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L----~~L~Ls~N 231 (914)
++|++++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|.+++..|..++.+++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9998886555578888899999999998886 468888888999999999998888888888888888 78889999
Q ss_pred cccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCC------CCCCCcccccc--ccccccccC
Q 042766 232 QFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFV------GSIPDSLSNAS--NLELLDLPS 303 (914)
Q Consensus 232 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~------~~~p~~~~~l~--~L~~L~Ls~ 303 (914)
.+++..|..|... +|+.|++++|......-...+.++++++.+.+..+.+. ......+..++ .++.+++++
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 8888888777766 78888888886543322334456777776665543332 12222333333 356677777
Q ss_pred c-cCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeec
Q 042766 304 N-QFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGR 382 (914)
Q Consensus 304 N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~ 382 (914)
| .+.+..+..|..+++|++|++++|.++.+ |..+..+ +|+.|++++|.+. .+|.. .+ .+|+.|++++
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l-------~~~~~~~-~L~~L~l~~n~~~-~l~~~--~l-~~L~~L~l~~ 334 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIERV-------KDFSYNF-GWQHLELVNCKFG-QFPTL--KL-KSLKRLTFTS 334 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEECSC-------CBCCSCC-CCSEEEEESCBCS-SCCBC--BC-SSCCEEEEES
T ss_pred chhhhhhchhhhcCcCcccEEEecCccchhh-------hhhhccC-CccEEeeccCccc-ccCcc--cc-cccCEEeCcC
Confidence 7 67777777788888888888888877653 3345566 7888888888877 55552 22 3577777777
Q ss_pred ccccccCCccccCCCCCcEEEcccCcccccC--ChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCC
Q 042766 383 NQISGTIPPGIRNLVNLITFTLEVNQFHGTI--PDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGN 460 (914)
Q Consensus 383 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 460 (914)
|.+.+..+. ..+++|++|++++|++++.. |..+..+++|++|++++|.+.+..+. +..+++|++|++++|.+++.
T Consensus 335 n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~ 411 (570)
T 2z63_A 335 NKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQM 411 (570)
T ss_dssp CBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESC
T ss_pred Ccccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccc
Confidence 777766554 66777788888877777554 66777777777777777777754443 77777777777777777765
Q ss_pred CC-CccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccc-cccCccc
Q 042766 461 IP-SSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFS-GVIPVTL 538 (914)
Q Consensus 461 ~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~ 538 (914)
.| ..+.++++|+.|++++|+ +.+..|..|.++++|++|+|++|+++ +.+|..+
T Consensus 412 ~~~~~~~~l~~L~~L~l~~n~-------------------------l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~ 466 (570)
T 2z63_A 412 SEFSVFLSLRNLIYLDISHTH-------------------------TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF 466 (570)
T ss_dssp TTSCTTTTCTTCCEEECTTSC-------------------------CEECCTTTTTTCTTCCEEECTTCEEGGGEECSCC
T ss_pred cchhhhhcCCCCCEEeCcCCc-------------------------ccccchhhhhcCCcCcEEECcCCcCccccchhhh
Confidence 54 456666666555555554 44456677888999999999999998 6789999
Q ss_pred cccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCCCc
Q 042766 539 STCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVKGV 611 (914)
Q Consensus 539 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 611 (914)
..+++|++|+|++|++++..|..|..+++|++|++++|++++.+|..+..+++|+.|++++|+++|.||..+.
T Consensus 467 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~ 539 (570)
T 2z63_A 467 TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 539 (570)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHH
T ss_pred hcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHH
Confidence 9999999999999999999999999999999999999999999899999999999999999999999997643
No 15
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=8.3e-51 Score=489.62 Aligned_cols=516 Identities=21% Similarity=0.210 Sum_probs=421.4
Q ss_pred CceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhcc
Q 042766 77 QRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCA 156 (914)
Q Consensus 77 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 156 (914)
..++.|||++|.+++..+.+|.++++|++|||++|+|++..|.+|++|++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36788999998888766677888999999999999888777778888999999999999888666667888899999999
Q ss_pred CCCcccCCCChhccccccccccccccccccC-cCCcccccccccceeecccCCCCCCCCccchhhhccc----ccccccc
Q 042766 157 SNNKLEGQIPKEIGNLLKLQRLSVDINYLTG-QLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLV----NLNVAEN 231 (914)
Q Consensus 157 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~Ls~N 231 (914)
++|++++..+..|+++++|++|+|++|++++ ..|..++.+++|++|+|++|++++..|..|..+.+++ .++++.|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 9998887666778888899999999998875 4677888888899999999988888888888887765 4678888
Q ss_pred cccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCcc------CCCCCCCccccccccccccccCcc
Q 042766 232 QFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNN------FVGSIPDSLSNASNLELLDLPSNQ 305 (914)
Q Consensus 232 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~------l~~~~p~~~~~l~~L~~L~Ls~N~ 305 (914)
.++...+..+. ...++.+++++|..+..++...+..++.++...+..+. +....+..+..+..+...++..+.
T Consensus 212 ~l~~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 212 PMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCEECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred cccccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 88865555444 44667788888877655555666677777776665443 333344556667777777776665
Q ss_pred CCcc---ccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeec
Q 042766 306 FKGK---VSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGR 382 (914)
Q Consensus 306 l~~~---~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~ 382 (914)
.... ....+..+.+++.+++.+|.+.... .+....+|+.|++++|.+.+..+..+ ..++.+++..
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--------~~~~~~~L~~L~l~~~~~~~~~~~~l----~~L~~l~l~~ 358 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--------DFSYNFGWQHLELVNCKFGQFPTLKL----KSLKRLTFTS 358 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECG--------GGGSCCCCSEEEEESCEESSCCCCBC----TTCCEEEEES
T ss_pred hcccccchhhhhhhhccccccccccccccccc--------ccccchhhhhhhcccccccCcCcccc----hhhhhccccc
Confidence 4432 3345677788999999998876542 24567889999999999985544332 2578899999
Q ss_pred ccccccCCccccCCCCCcEEEcccCccc--ccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCC
Q 042766 383 NQISGTIPPGIRNLVNLITFTLEVNQFH--GTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGN 460 (914)
Q Consensus 383 N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 460 (914)
|.+.... .+..+++|+.|++++|.+. +..+..+..+.+|+.|+++.|.+.+ .+..+..+++|+.++++.|.....
T Consensus 359 n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~ 435 (635)
T 4g8a_A 359 NKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQM 435 (635)
T ss_dssp CCSCCBC--CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEEST
T ss_pred ccCCCCc--ccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccc
Confidence 9876543 4567899999999999986 4567788899999999999999884 566788999999999999887655
Q ss_pred C-CCccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCcc-CCCccccccccccceeecccCCccccccCccc
Q 042766 461 I-PSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLL-NGSLPLQVGNLKNLVMLDISSNQFSGVIPVTL 538 (914)
Q Consensus 461 ~-p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 538 (914)
. +..+.++++++.++++.|.+.+..|..+..+..+ +.|++++|.+ .+..|..|..+++|++|||++|+|++++|.+|
T Consensus 436 ~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L-~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f 514 (635)
T 4g8a_A 436 SEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL-EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 514 (635)
T ss_dssp TSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC-CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred ccccccccccccccccccccccccccccccccchhh-hhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHH
Confidence 4 4568899999999999999998888777777777 8999999975 45678899999999999999999999999999
Q ss_pred cccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCcccccc-CCCCeEeCCCCccccccCCC
Q 042766 539 STCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENL-SFLEFLNLSYNYFEGEVPVK 609 (914)
Q Consensus 539 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~ls~N~l~~~~p~~ 609 (914)
+++++|++|+|++|+|++.+|..|..+++|++|||++|+|++.+|+.+..+ ++|++|+|++|+|.|+|...
T Consensus 515 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~ 586 (635)
T 4g8a_A 515 NSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQ 586 (635)
T ss_dssp TTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGH
T ss_pred cCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcH
Confidence 999999999999999999999999999999999999999999999999988 68999999999999999854
No 16
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.5e-52 Score=499.89 Aligned_cols=516 Identities=19% Similarity=0.263 Sum_probs=316.2
Q ss_pred CCCHhHHHHHHHHHHhcCCCCCCCCCCCCCCC----CCCccce--eecCCC-CceEEEecCCCCCccccCCCCCCCCCCC
Q 042766 32 QTNETDRLALLAIKSQLHDPSGVTSSWNNTMN----FCQWTGV--TCGHRH-QRLTELNLSSQRIGGVLSPYVGNLSFLR 104 (914)
Q Consensus 32 ~~~~~~~~aLl~~k~~~~~~~~~~~~w~~~~~----~c~w~gv--~C~~~~-~~v~~l~l~~~~l~~~~~~~l~~l~~L~ 104 (914)
...+.+...-.++++-...-.+ ..|....+ .|.|..- .|.|.. ..|+. ... .+++
T Consensus 23 ~~~~~~~~d~~aL~~~~~~~~~--~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C---~~~-------------~~V~ 84 (636)
T 4eco_A 23 SRTAEYIKDYLALKEIWDALNG--KNWSQQGFGTQPGANWNFNKELDMWGAQPGVSL---NSN-------------GRVT 84 (636)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTG--GGCCCCC------CCCCCSSCGGGTTCCTTEEE---CTT-------------CCEE
T ss_pred hhhhhHHHHHHHHHHHHHHcCC--CCcccCCcCCccCCCCCCCCCcccccCCCCeEE---cCC-------------CCEE
Confidence 3456666777777766543333 47874332 3479632 355511 12331 000 3688
Q ss_pred EEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccccccccccccccc
Q 042766 105 YINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINY 184 (914)
Q Consensus 105 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 184 (914)
.|+|++|+++|.+|+++++|++|++|||++|.+.. .+..++... +...+|... +.+|+ ++++.|.
T Consensus 85 ~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~-~~~~~~~~~-----------~~~~~~~~~--~~~l~-l~l~~~~ 149 (636)
T 4eco_A 85 GLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKV-NERLFGPKG-----------ISANMSDEQ--KQKMR-MHYQKTF 149 (636)
T ss_dssp EEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGG-TCCSBSTTS-----------BCTTCCHHH--HHHHH-THHHHHH
T ss_pred EEEecCcccCCcCChHHhcCccceEEECcCCcccc-CCccccccc-----------cccCchHHH--HHHHH-hhHHHhh
Confidence 99999999999999999999999999999998731 111111000 011344444 45566 6777777
Q ss_pred ccCcCCccccc-ccccceeecccCCCCCCCCccchhhhcccccccc--cccccCCCCCccccccccceeeccCCcccCc-
Q 042766 185 LTGQLPDSVGN-LSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVA--ENQFSGMFPRSICNISSVELIFLTENRFSGI- 260 (914)
Q Consensus 185 l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls--~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~- 260 (914)
+.+.+|..+.. +..+..+++....+.. .....++.+.+. .|+++| +|..|+++++|++|+|++|++++.
T Consensus 150 l~~~~~~~~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~ 222 (636)
T 4eco_A 150 VDYDPREDFSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAEN 222 (636)
T ss_dssp TCCCGGGGSCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGG
T ss_pred hccCchhhHHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccc
Confidence 76666665542 3344444544433321 111233333333 467776 677777777777777777777763
Q ss_pred ----------------cccccc-ccCcccceeeccCccCCCCCCCccccccccccccccCcc-CCc-ccccccccc----
Q 042766 261 ----------------FPFDIL-LNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQ-FKG-KVSIDFSSL---- 317 (914)
Q Consensus 261 ----------------~p~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~~~~~~~l---- 317 (914)
+|..+. .++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..+..+
T Consensus 223 ~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~ 302 (636)
T 4eco_A 223 ICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAP 302 (636)
T ss_dssp BSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSG
T ss_pred ccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccc
Confidence 554331 266777777777777777777777777777777777776 776 666665554
Q ss_pred --ccccceeccCCcCCCCCCCCcchhh--cccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccc
Q 042766 318 --KNLWLLNLEQNNLGTGTANDLDFVI--FLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGI 393 (914)
Q Consensus 318 --~~L~~L~L~~N~l~~~~~~~~~~~~--~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~ 393 (914)
++|++|++++|+++. +|. .++++++|++|+|++|+++|.+| .|
T Consensus 303 ~l~~L~~L~L~~n~l~~-------ip~~~~l~~l~~L~~L~L~~N~l~g~ip--------------------------~~ 349 (636)
T 4eco_A 303 VGEKIQIIYIGYNNLKT-------FPVETSLQKMKKLGMLECLYNQLEGKLP--------------------------AF 349 (636)
T ss_dssp GGGTCCEEECCSSCCSS-------CCCHHHHTTCTTCCEEECCSCCCEEECC--------------------------CC
T ss_pred cCCCCCEEECCCCcCCc-------cCchhhhccCCCCCEEeCcCCcCccchh--------------------------hh
Confidence 555555555555552 233 34555555555555555554444 44
Q ss_pred cCCCCCcEEEcccCcccccCChhhhcccC-CceeeecccccccccCccccCCC--CCCeEEeeCCcCCCCCCCccC----
Q 042766 394 RNLVNLITFTLEVNQFHGTIPDVISELKN-LQQLSVFNNFLRGGIPSGLGNLT--KLGSLDLGSNSLQGNIPSSLG---- 466 (914)
Q Consensus 394 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~---- 466 (914)
+.+++|++|+|++|+++ .+|..+..+++ |++|++++|.++ .+|..+..++ +|++|+|++|++++.+|..+.
T Consensus 350 ~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~ 427 (636)
T 4eco_A 350 GSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDP 427 (636)
T ss_dssp EEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCS
T ss_pred CCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhccccc
Confidence 44444444444444444 34444444444 444444444444 3444443332 444555555555444444444
Q ss_pred ---CCCCccccccCCCccCCCCchhhhc-ccchhhhhcccCCccCCCcccc-c-------cccccceeecccCCcccccc
Q 042766 467 ---NCQNLILFIASYNKLTGDLPQQLLS-ITTLSLVLDLSNNLLNGSLPLQ-V-------GNLKNLVMLDISSNQFSGVI 534 (914)
Q Consensus 467 ---~l~~L~~L~l~~N~l~~~~p~~~~~-~~~l~~~L~Ls~N~l~~~~p~~-~-------~~l~~L~~L~Ls~N~l~~~~ 534 (914)
.+++|+.|++++|+++ .+|..++. ++.+ ++|+|++|+++ .+|.. + .++++|+.|+|++|+++ .+
T Consensus 428 ~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L-~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l 503 (636)
T 4eco_A 428 TPFKGINVSSINLSNNQIS-KFPKELFSTGSPL-SSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KL 503 (636)
T ss_dssp SCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCC-SEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BC
T ss_pred ccccCCCCCEEECcCCccC-cCCHHHHccCCCC-CEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-cc
Confidence 4444555555555554 34443332 3333 45555555555 33322 2 23448888999999888 56
Q ss_pred Ccccc--ccccccEEEeecccccccCCcchhccCCCCEEEc------cCCccccccCccccccCCCCeEeCCCCcccccc
Q 042766 535 PVTLS--TCVSLEYLDISINSFYGVIPLSFRFLKSIKALNV------SSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEV 606 (914)
Q Consensus 535 p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 606 (914)
|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+| ++|++.+.+|..+..+++|+.|+|++|++ +.+
T Consensus 504 p~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~i 581 (636)
T 4eco_A 504 SDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKV 581 (636)
T ss_dssp CGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBC
T ss_pred ChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-Ccc
Confidence 77776 88899999999999887 7888888999999988 57889999999999999999999999999 788
Q ss_pred CCCCcCCCCCccCccCCCCCCCC
Q 042766 607 PVKGVFSNKTKISLHGNVKLCGG 629 (914)
Q Consensus 607 p~~~~~~~~~~~~~~~n~~lc~~ 629 (914)
|.. ....+..+.+++|+..|-.
T Consensus 582 p~~-~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 582 NEK-ITPNISVLDIKDNPNISID 603 (636)
T ss_dssp CSC-CCTTCCEEECCSCTTCEEE
T ss_pred CHh-HhCcCCEEECcCCCCcccc
Confidence 876 3478889999999888754
No 17
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-51 Score=486.65 Aligned_cols=504 Identities=20% Similarity=0.201 Sum_probs=358.7
Q ss_pred ecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCccc
Q 042766 83 NLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLE 162 (914)
Q Consensus 83 ~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 162 (914)
+.++.+++ .+|..+. +++++|+|++|++++..|..|.++++|++|||++|++++..|..|+++++|++|+|++|+++
T Consensus 13 ~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~ 89 (570)
T 2z63_A 13 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89 (570)
T ss_dssp ECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCC
Confidence 33444443 3555443 57899999999999888888999999999999999999777788999999999999999998
Q ss_pred CCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCC-CCCccchhhhcccccccccccccCCCCCcc
Q 042766 163 GQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGG-KIPTTLGLLRRLVNLNVAENQFSGMFPRSI 241 (914)
Q Consensus 163 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 241 (914)
+..|..|+++++|++|++++|++++..+..++++++|++|++++|.+++ .+|..|+++++|++|++++|++++..|..+
T Consensus 90 ~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~ 169 (570)
T 2z63_A 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 169 (570)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGG
T ss_pred ccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHc
Confidence 7777889999999999999999986666678999999999999999886 468889999999999999999988878888
Q ss_pred cccccc----ceeeccCCcccCcccccccccCcccceeeccCccCCC-CCCCccccccccccccccCccCC------ccc
Q 042766 242 CNISSV----ELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVG-SIPDSLSNASNLELLDLPSNQFK------GKV 310 (914)
Q Consensus 242 ~~l~~L----~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~------~~~ 310 (914)
..+++| +.|++++|.+++..| ..+.. .+|++|++++|.... .+|..+..+++++.+++..+.+. ...
T Consensus 170 ~~l~~L~~~~~~L~l~~n~l~~~~~-~~~~~-~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~ 247 (570)
T 2z63_A 170 RVLHQMPLLNLSLDLSLNPMNFIQP-GAFKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFD 247 (570)
T ss_dssp HHHHTCTTCCCEEECTTCCCCEECT-TTTTT-CEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECC
T ss_pred cchhccchhhhhcccCCCCceecCH-HHhcc-CcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcc
Confidence 888888 788888888876544 34433 378888888774331 23444555666665555433222 122
Q ss_pred cccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEecccc-ccCCCcCchhhccccccEEEEeecccccccC
Q 042766 311 SIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDN-QFGGELPHSIANLSLKMIELSVGRNQISGTI 389 (914)
Q Consensus 311 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N-~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~ 389 (914)
...|.+++++ .++.+++++| .+.+.+|..+..+. +++.|++++|.++ .+
T Consensus 248 ~~~~~~l~~l----------------------------~l~~l~l~~~~~~~~~~~~~~~~l~-~L~~L~l~~~~l~-~l 297 (570)
T 2z63_A 248 KSALEGLCNL----------------------------TIEEFRLAYLDYYLDDIIDLFNCLT-NVSSFSLVSVTIE-RV 297 (570)
T ss_dssp TTTTGGGGGS----------------------------EEEEEEEEETTEEESCSTTTTGGGT-TCSEEEEESCEEC-SC
T ss_pred hhhhcccccc----------------------------chhhhhhhcchhhhhhchhhhcCcC-cccEEEecCccch-hh
Confidence 2222222221 2344444444 44444444444443 3555555555554 34
Q ss_pred CccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCC--CCccCC
Q 042766 390 PPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNI--PSSLGN 467 (914)
Q Consensus 390 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~ 467 (914)
|..+..+ +|++|++++|++. .+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. |..+.+
T Consensus 298 ~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~ 371 (570)
T 2z63_A 298 KDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFG 371 (570)
T ss_dssp CBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHT
T ss_pred hhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccc
Confidence 4445555 5555555555555 3332 2455555555555555544333 44555555555555555332 444555
Q ss_pred CCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCcc-ccccccccceeecccCCccccccCccccccccccE
Q 042766 468 CQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLP-LQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEY 546 (914)
Q Consensus 468 l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 546 (914)
+++|+.|++++|++++ +|..+..+..+ +.|++++|.+.+..| ..+.++++|++|++++|++++.+|..|.++++|++
T Consensus 372 ~~~L~~L~l~~n~l~~-~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 449 (570)
T 2z63_A 372 TTSLKYLDLSFNGVIT-MSSNFLGLEQL-EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 449 (570)
T ss_dssp CSCCCEEECCSCSEEE-EEEEEETCTTC-CEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred cCccCEEECCCCcccc-ccccccccCCC-CEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcE
Confidence 5555555555555553 23334444444 566666666665555 46788999999999999999999999999999999
Q ss_pred EEeeccccc-ccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCC-CcCCCCCccCccCCC
Q 042766 547 LDISINSFY-GVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVK-GVFSNKTKISLHGNV 624 (914)
Q Consensus 547 L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~ 624 (914)
|+|++|.++ +.+|..|..+++|++|++++|++++..|..+..+++|++|++++|++++.+|.. ..+..+..+.+.+|+
T Consensus 450 L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 529 (570)
T 2z63_A 450 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNP 529 (570)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCc
Confidence 999999998 689999999999999999999999999999999999999999999999877653 456788889999998
Q ss_pred CCCCC
Q 042766 625 KLCGG 629 (914)
Q Consensus 625 ~lc~~ 629 (914)
..|..
T Consensus 530 ~~~~~ 534 (570)
T 2z63_A 530 WDCSC 534 (570)
T ss_dssp BCCCT
T ss_pred ccCCC
Confidence 87753
No 18
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.6e-51 Score=500.00 Aligned_cols=466 Identities=19% Similarity=0.219 Sum_probs=347.7
Q ss_pred CCCCEEEcCCCCCcccCCcccCCCCCCCeeec-CCCCCCCcCCCCcccc----CCcchhccC------------CCcccC
Q 042766 101 SFLRYINLADNGFRGDIPQEIGNLFRLEKLAL-SNNSFSGTIPTNLSRC----SNLIHFCAS------------NNKLEG 163 (914)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L-s~N~l~~~~p~~l~~l----~~L~~L~Ls------------~N~l~~ 163 (914)
.+++.|+|++|+++|.+|++|++|++|++||| ++|.++|..|-..... +..+...+. ...+++
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999999999999999999999 9999988755332111 110000000 001110
Q ss_pred -----------CCChhcccccccccccccc--ccccCcCCcccccccccceeecccCCCCC-----------------CC
Q 042766 164 -----------QIPKEIGNLLKLQRLSVDI--NYLTGQLPDSVGNLSAIEVIRITENSLGG-----------------KI 213 (914)
Q Consensus 164 -----------~~p~~~~~l~~L~~L~L~~--N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~ 213 (914)
..+........++.+.+.. |+++| +|..|+++++|++|+|++|.+++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 1111112334566666665 99998 89999999999999999999998 38
Q ss_pred Cccch--hhhcccccccccccccCCCCCccccccccceeeccCCc-ccC-ccccccc------ccCcccceeeccCccCC
Q 042766 214 PTTLG--LLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENR-FSG-IFPFDIL------LNLPNLKKLGIGGNNFV 283 (914)
Q Consensus 214 p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~------~~l~~L~~L~Ls~N~l~ 283 (914)
|..++ ++++|++|+|++|++.+.+|..|.++++|+.|+|++|+ ++| .+|..+. ..+++|++|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 99987 99999999999999999999999999999999999998 998 7786543 24459999999999999
Q ss_pred CCCCC--ccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCC-CcEEecccccc
Q 042766 284 GSIPD--SLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSS-LKVLSLSDNQF 360 (914)
Q Consensus 284 ~~~p~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~-L~~L~Ls~N~l 360 (914)
.+|. .|+++++|+.|+|++|+++ .+| .|..+++|+.|+|++|.++. +|..+..+++ |+.|+|++|++
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~-------lp~~l~~l~~~L~~L~Ls~N~L 631 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEE-------IPEDFCAFTDQVEGLGFSHNKL 631 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSC-------CCTTSCEECTTCCEEECCSSCC
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCcccc-------chHHHhhccccCCEEECcCCCC
Confidence 8898 9999999999999999999 666 89999999999999999985 4556788998 99999999999
Q ss_pred CCCcCchhhccc-cccEEEEeecccccccCCccc---c--CCCCCcEEEcccCcccccCChhhhcccCCceeeecccccc
Q 042766 361 GGELPHSIANLS-LKMIELSVGRNQISGTIPPGI---R--NLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLR 434 (914)
Q Consensus 361 ~~~~p~~~~~~~-~~L~~L~L~~N~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 434 (914)
+ .+|..+.... .+|+.|++++|++.+.+|... . .+.+|+.|+|++|+++...+..+..+++|+.|+|++|+|+
T Consensus 632 ~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~ 710 (876)
T 4ecn_A 632 K-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT 710 (876)
T ss_dssp C-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS
T ss_pred C-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC
Confidence 9 8888776654 248999999999988766432 2 3347888888888888443344557888888888888888
Q ss_pred cccCccccCC--------CCCCeEEeeCCcCCCCCCCccC--CCCCccccccCCCccCCCCchhhhcccchhhhhcccCC
Q 042766 435 GGIPSGLGNL--------TKLGSLDLGSNSLQGNIPSSLG--NCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNN 504 (914)
Q Consensus 435 ~~~p~~~~~l--------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N 504 (914)
.+|..+... ++|+.|+|++|+|+ .+|..+. .+++|+.|++++|++++ +|..+..+..+ +.|+|++|
T Consensus 711 -~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L-~~L~Ls~N 786 (876)
T 4ecn_A 711 -SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQL-KAFGIRHQ 786 (876)
T ss_dssp -CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTC-CEEECCCC
T ss_pred -ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCC-CEEECCCC
Confidence 555543322 27777777777777 5666665 66666666666666653 44444433333 33444333
Q ss_pred ccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCc
Q 042766 505 LLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPE 584 (914)
Q Consensus 505 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 584 (914)
+ ++++|++.+.+|..|..+++|+.|+|++|++ +.+|..+. ++|+.|||++|++....+.
T Consensus 787 ~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~ 845 (876)
T 4ecn_A 787 R------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVT 845 (876)
T ss_dssp B------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECG
T ss_pred C------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChH
Confidence 3 3344777777777777777777777777777 56666654 5777777777777766666
Q ss_pred cccccCCCCeEeCCCCccc
Q 042766 585 FLENLSFLEFLNLSYNYFE 603 (914)
Q Consensus 585 ~~~~l~~L~~L~ls~N~l~ 603 (914)
.+.....+..+.|++|++.
T Consensus 846 ~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 846 SVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp GGHHHHHTTCCEEECCTTS
T ss_pred HccccccchheeecCCCcc
Confidence 6665555666666666654
No 19
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.8e-51 Score=481.20 Aligned_cols=458 Identities=19% Similarity=0.225 Sum_probs=339.2
Q ss_pred CEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccc
Q 042766 104 RYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDIN 183 (914)
Q Consensus 104 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 183 (914)
++||+++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57888888888 6777666 78888888888888666677788888888888888888777777888888888888888
Q ss_pred cccCcCCcccccccccceeecccCCCCC-CCCccchhhhcccccccccccccCCCCCcccccccc--ceeeccCCcc--c
Q 042766 184 YLTGQLPDSVGNLSAIEVIRITENSLGG-KIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSV--ELIFLTENRF--S 258 (914)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~ 258 (914)
+++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|++++|++++ ..+..+++| ++|++++|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 877 55655 67777777777777776 466777777777777777777764 345555555 6666666666 4
Q ss_pred CcccccccccCc-ccceeeccCccCCCCCCC-ccccccccccccccCcc-------CCccccccccccccccceeccCCc
Q 042766 259 GIFPFDILLNLP-NLKKLGIGGNNFVGSIPD-SLSNASNLELLDLPSNQ-------FKGKVSIDFSSLKNLWLLNLEQNN 329 (914)
Q Consensus 259 ~~~p~~~~~~l~-~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~-------l~~~~~~~~~~l~~L~~L~L~~N~ 329 (914)
+..|..+ ..+. +...+++++|++.+.+++ .+..+++|+.|++++|+ +.+.++
T Consensus 154 ~~~~~~l-~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~------------------ 214 (520)
T 2z7x_B 154 KEDPEGL-QDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA------------------ 214 (520)
T ss_dssp SCCTTTT-TTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH------------------
T ss_pred ccccccc-cccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh------------------
Confidence 4444322 1222 222344555554443332 34445555555555554 222222
Q ss_pred CCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhcc--ccccEEEEeecccccccCCccc-----cCCCCCcEE
Q 042766 330 LGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANL--SLKMIELSVGRNQISGTIPPGI-----RNLVNLITF 402 (914)
Q Consensus 330 l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~--~~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L 402 (914)
.++.+++|+.|++++|.+++..+..+... ..+|++|++++|+++|.+|..+ .++++|+.+
T Consensus 215 -------------~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l 281 (520)
T 2z7x_B 215 -------------KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIH 281 (520)
T ss_dssp -------------GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEE
T ss_pred -------------hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEec
Confidence 34556666666666666654332222210 1257788888888888888877 889999999
Q ss_pred EcccCcccccCC-hhhhcc---cCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCC
Q 042766 403 TLEVNQFHGTIP-DVISEL---KNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASY 478 (914)
Q Consensus 403 ~L~~N~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 478 (914)
++++|.+ .+| ..+..+ .+|+.|++++|.+.+.. .+..+++|++|+|++|++++.+|..++++++|+.|++++
T Consensus 282 ~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 357 (520)
T 2z7x_B 282 QVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQM 357 (520)
T ss_dssp EEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCS
T ss_pred cccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccC
Confidence 9999998 445 666666 67999999999887432 126788999999999999988999999999999999999
Q ss_pred CccCC--CCchhhhcccchhhhhcccCCccCCCccc-cccccccceeecccCCccccccCccccccccccEEEeeccccc
Q 042766 479 NKLTG--DLPQQLLSITTLSLVLDLSNNLLNGSLPL-QVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFY 555 (914)
Q Consensus 479 N~l~~--~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 555 (914)
|++++ .+|..+..++.+ ++|++++|.+++.+|. .+..+++|+.|+|++|++++.+|..+. ++|++|+|++|+++
T Consensus 358 N~l~~l~~~~~~~~~l~~L-~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 358 NQLKELSKIAEMTTQMKSL-QQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp SCCCBHHHHHHHHTTCTTC-CEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred CccCccccchHHHhhCCCC-CEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc
Confidence 99986 566778888888 8999999999985665 488899999999999999988887765 79999999999998
Q ss_pred ccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCCC
Q 042766 556 GVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVKG 610 (914)
Q Consensus 556 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 610 (914)
.+|..+..+++|++|+|++|+|++..+..+..+++|+.|++++|+++|.|+..+
T Consensus 435 -~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~ 488 (520)
T 2z7x_B 435 -SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 488 (520)
T ss_dssp -CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHHHH
T ss_pred -ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCchH
Confidence 788888899999999999999995444459999999999999999999988543
No 20
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.4e-50 Score=478.91 Aligned_cols=483 Identities=20% Similarity=0.231 Sum_probs=327.4
Q ss_pred CEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccc
Q 042766 104 RYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDIN 183 (914)
Q Consensus 104 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 183 (914)
...|+++|+++ .+|..+. ++|++|||++|++++..|..|+++++|++|+|++|++++..|.+|+++++|++|+|++|
T Consensus 8 ~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n 84 (549)
T 2z81_A 8 GVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDN 84 (549)
T ss_dssp SEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred ceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCC
Confidence 34677778887 6776654 67888888888888767777777888888888888777666677777777777777777
Q ss_pred cccCcCCcccccccccceeecccCCCCC-CCCccchhhhcccccccccccccCCC-CCccccccccceeeccCCcccCcc
Q 042766 184 YLTGQLPDSVGNLSAIEVIRITENSLGG-KIPTTLGLLRRLVNLNVAENQFSGMF-PRSICNISSVELIFLTENRFSGIF 261 (914)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~ 261 (914)
++++..|..|+++++|++|+|++|.+++ ..|..++++++|++|++++|++.+.+ +..|.++++|++|++++|++++
T Consensus 85 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~-- 162 (549)
T 2z81_A 85 HLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN-- 162 (549)
T ss_dssp CCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE--
T ss_pred ccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccc--
Confidence 7776666667777777777777777765 24556666666666666666533233 2445555555555555555554
Q ss_pred cccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchh
Q 042766 262 PFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFV 341 (914)
Q Consensus 262 p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 341 (914)
..|..+..+++|++|++++|.+....+..+..+++|++|++++|++++......
T Consensus 163 -----------------------~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~--- 216 (549)
T 2z81_A 163 -----------------------YQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPL--- 216 (549)
T ss_dssp -----------------------ECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCC---
T ss_pred -----------------------cChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcccccccccc---
Confidence 444444444444444444444443322223334455555555555444321110
Q ss_pred hcccCCCCCcEEeccccccCCCcCchhhcc---ccccEEEEeecccccccC------CccccCCCCCcEEEcccCcccc-
Q 042766 342 IFLSNCSSLKVLSLSDNQFGGELPHSIANL---SLKMIELSVGRNQISGTI------PPGIRNLVNLITFTLEVNQFHG- 411 (914)
Q Consensus 342 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~---~~~L~~L~L~~N~l~~~~------p~~~~~l~~L~~L~L~~N~l~~- 411 (914)
.....+++|+.|++++|.+++..+..+... ..+++.+++++|.+.+.. ...+..+.+|+.|++.++.+..
T Consensus 217 ~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~ 296 (549)
T 2z81_A 217 PVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQF 296 (549)
T ss_dssp SSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCG
T ss_pred chhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchh
Confidence 012234555555555555554333332211 124556666666555421 2345667778888888777653
Q ss_pred ----cCChhhhcccCCceeeecccccccccCccc-cCCCCCCeEEeeCCcCCCCCC---CccCCCCCccccccCCCccCC
Q 042766 412 ----TIPDVISELKNLQQLSVFNNFLRGGIPSGL-GNLTKLGSLDLGSNSLQGNIP---SSLGNCQNLILFIASYNKLTG 483 (914)
Q Consensus 412 ----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~~ 483 (914)
..+..+...++|+.|++++|.+. .+|..+ ..+++|++|+|++|++++.+| ..++.+++|+.|++++|++++
T Consensus 297 ~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 375 (549)
T 2z81_A 297 YLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRS 375 (549)
T ss_dssp GGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCC
T ss_pred hhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccc
Confidence 23444556678888888888887 566655 578888888888888887653 447788888888888888874
Q ss_pred CCc--hhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcc
Q 042766 484 DLP--QQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLS 561 (914)
Q Consensus 484 ~~p--~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 561 (914)
..+ ..+..+..+ ++|++++|+++ .+|..+..+++|++|+|++|++++. |..+ .++|++|+|++|++++.+
T Consensus 376 ~~~~~~~~~~l~~L-~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l-~~~~--~~~L~~L~Ls~N~l~~~~--- 447 (549)
T 2z81_A 376 MQKTGEILLTLKNL-TSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVV-KTCI--PQTLEVLDVSNNNLDSFS--- 447 (549)
T ss_dssp HHHHHHHGGGCTTC-CEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCC-CTTS--CTTCSEEECCSSCCSCCC---
T ss_pred cccchhhhhcCCCC-CEEECCCCCCc-cCChhhcccccccEEECCCCCcccc-cchh--cCCceEEECCCCChhhhc---
Confidence 322 346667777 78999999998 6788899999999999999999854 4433 268999999999999754
Q ss_pred hhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCC-CcCCCCCccCccCCCCCCCC
Q 042766 562 FRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVK-GVFSNKTKISLHGNVKLCGG 629 (914)
Q Consensus 562 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~ 629 (914)
..+++|++|+|++|+|+ .+|+ ...+++|++|||++|++++.+|.. ..+..+..+.+.+|++.|..
T Consensus 448 -~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 448 -LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp -CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred -ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 57899999999999999 6676 467999999999999999987763 56778889999999988753
No 21
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=7e-51 Score=477.86 Aligned_cols=456 Identities=16% Similarity=0.184 Sum_probs=368.8
Q ss_pred EEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCC
Q 042766 80 TELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNN 159 (914)
Q Consensus 80 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 159 (914)
+.||+++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|||++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 46899999998 5787776 89999999999999888889999999999999999999888999999999999999999
Q ss_pred cccCCCChhccccccccccccccccccC-cCCcccccccccceeecccCCCCCCCCccchhhhcc--cccccccccc--c
Q 042766 160 KLEGQIPKEIGNLLKLQRLSVDINYLTG-QLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRL--VNLNVAENQF--S 234 (914)
Q Consensus 160 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~ 234 (914)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|.+++ ..++.+++| ++|++++|++ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 999 67776 89999999999999997 578999999999999999999986 567888888 9999999999 8
Q ss_pred CCCCCcccccc-ccceeeccCCcccCcccccccccCcccceeeccCcc-------CCCCCCCccccccccccccccCccC
Q 042766 235 GMFPRSICNIS-SVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNN-------FVGSIPDSLSNASNLELLDLPSNQF 306 (914)
Q Consensus 235 ~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~-------l~~~~p~~~~~l~~L~~L~Ls~N~l 306 (914)
+..|..+..+. +...+++++|++.+.++...+.++++|+.|++++|. +.+.+| .++.+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 88899988877 455678999999998888888899999999999998 776666 789999999999999998
Q ss_pred Ccccccccc---ccccccceeccCCcCCCCCCCCcchhhcc-----cCCCCCcEEeccccccCCCcC-chhhccc--ccc
Q 042766 307 KGKVSIDFS---SLKNLWLLNLEQNNLGTGTANDLDFVIFL-----SNCSSLKVLSLSDNQFGGELP-HSIANLS--LKM 375 (914)
Q Consensus 307 ~~~~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~l-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~~~--~~L 375 (914)
++..+..+. ..++|++|++++|++++. +|..+ ..+++|+.+++++|.+ .+| ..+..+. .++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~------~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L 304 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQ------LDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNI 304 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESC------CCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCC
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCc------cccchhhcccccCceeEeccccccce--ecchhhhhcccccCce
Confidence 865433221 235788888888888743 33344 7788888888888888 456 4444431 247
Q ss_pred EEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeeccccccc--ccCccccCCCCCCeEEee
Q 042766 376 IELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRG--GIPSGLGNLTKLGSLDLG 453 (914)
Q Consensus 376 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls 453 (914)
+.|++++|.+.+.. .+..+++|++|++++|++++.+|..+..+++|++|+|++|++++ .+|..+..+++|++|+|+
T Consensus 305 ~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls 382 (520)
T 2z7x_B 305 KNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDIS 382 (520)
T ss_dssp SEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECC
T ss_pred eEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECC
Confidence 88888888776432 12577778888888888887777778888888888888888876 455667778888888888
Q ss_pred CCcCCCCCCC-ccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCcccc
Q 042766 454 SNSLQGNIPS-SLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSG 532 (914)
Q Consensus 454 ~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 532 (914)
+|++++.+|. .+..+++|+.|++++|++++ ..|..+. ++|+.|||++|+++
T Consensus 383 ~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~-------------------------~~~~~l~--~~L~~L~Ls~N~l~- 434 (520)
T 2z7x_B 383 QNSVSYDEKKGDCSWTKSLLSLNMSSNILTD-------------------------TIFRCLP--PRIKVLDLHSNKIK- 434 (520)
T ss_dssp SSCCBCCGGGCSCCCCTTCCEEECCSSCCCG-------------------------GGGGSCC--TTCCEEECCSSCCC-
T ss_pred CCcCCcccccchhccCccCCEEECcCCCCCc-------------------------chhhhhc--ccCCEEECCCCccc-
Confidence 8888764554 36666777666666666653 3333332 57889999999998
Q ss_pred ccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccC
Q 042766 533 VIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIP 583 (914)
Q Consensus 533 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 583 (914)
.+|..+..+++|++|+|++|++++..+..|..+++|++|++++|++++..+
T Consensus 435 ~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 435 SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 677777789999999999999985444458899999999999999987544
No 22
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.5e-48 Score=469.88 Aligned_cols=529 Identities=18% Similarity=0.157 Sum_probs=431.4
Q ss_pred ecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCccc
Q 042766 83 NLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLE 162 (914)
Q Consensus 83 ~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 162 (914)
+-++.+|+ .+|+.+- +.+++|||++|+|++..|.+|.++++|++|||++|+|++..|.+|.++++|++|+|++|+++
T Consensus 37 ~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 37 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp ECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred ECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC
Confidence 33444554 4565442 47899999999999877889999999999999999999777788999999999999999999
Q ss_pred CCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCC-CCCccchhhhcccccccccccccCCCCCcc
Q 042766 163 GQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGG-KIPTTLGLLRRLVNLNVAENQFSGMFPRSI 241 (914)
Q Consensus 163 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 241 (914)
+..|..|.++++|++|+|++|++++..+..|+++++|++|+|++|.+++ .+|..++.+++|++|+|++|++++..|..|
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 193 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 193 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccc
Confidence 7777789999999999999999998777889999999999999999986 468899999999999999999999999988
Q ss_pred ccccccc----eeeccCCcccCcccccccccCcccceeeccCccCCC-CCCCccccccccccccccCcc------CCccc
Q 042766 242 CNISSVE----LIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVG-SIPDSLSNASNLELLDLPSNQ------FKGKV 310 (914)
Q Consensus 242 ~~l~~L~----~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~------l~~~~ 310 (914)
..+.+++ .++++.|.++...+ ..+ ....++.+++++|.... ..+..+..++.++..++..+. +....
T Consensus 194 ~~L~~l~~~~~~~~ls~n~l~~i~~-~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~ 271 (635)
T 4g8a_A 194 RVLHQMPLLNLSLDLSLNPMNFIQP-GAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFD 271 (635)
T ss_dssp HHHHTCTTCCCEEECTTCCCCEECT-TTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCC
T ss_pred cchhhhhhhhhhhhcccCcccccCc-ccc-cchhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccc
Confidence 8877654 58899999986543 444 45567889999987653 233456667777776665443 33344
Q ss_pred cccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCC
Q 042766 311 SIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIP 390 (914)
Q Consensus 311 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p 390 (914)
...+..+..+...++..+........ .+..+..+.+++.+++.+|.+....+ +... ..++.|++.+|.+.+..+
T Consensus 272 ~~~~~~~~~l~~~~l~~~~~~~~~~~---~~~~~~~~~~l~~l~~~~~~~~~~~~--~~~~-~~L~~L~l~~~~~~~~~~ 345 (635)
T 4g8a_A 272 KSALEGLCNLTIEEFRLAYLDYYLDG---IIDLFNCLTNVSSFSLVSVTIERVKD--FSYN-FGWQHLELVNCKFGQFPT 345 (635)
T ss_dssp TTTTGGGGGSEEEEEEEECCCSCEEE---CTTTTGGGTTCSEEEEESCEEEECGG--GGSC-CCCSEEEEESCEESSCCC
T ss_pred ccccccccchhhhhhhhhhhcccccc---hhhhhhhhcccccccccccccccccc--cccc-hhhhhhhcccccccCcCc
Confidence 45566677777777666554332111 22345677889999999998874332 2222 368999999999987655
Q ss_pred ccccCCCCCcEEEcccCcccccCChhhhcccCCceeeeccccccc--ccCccccCCCCCCeEEeeCCcCCCCCCCccCCC
Q 042766 391 PGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRG--GIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNC 468 (914)
Q Consensus 391 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 468 (914)
. .+..|+.++++.|.+....+ ...+++|+.|++++|.+.. ..+..+..+.+|+.|+++.|.+. ..+..+..+
T Consensus 346 ~---~l~~L~~l~l~~n~~~~~~~--~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l 419 (635)
T 4g8a_A 346 L---KLKSLKRLTFTSNKGGNAFS--EVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGL 419 (635)
T ss_dssp C---BCTTCCEEEEESCCSCCBCC--CCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTC
T ss_pred c---cchhhhhcccccccCCCCcc--cccccccccchhhccccccccccccchhhhhhhhhhhccccccc-ccccccccc
Confidence 4 46778999999999875443 4578999999999999864 45667788999999999999987 456678899
Q ss_pred CCccccccCCCccCCCCchh-hhcccchhhhhcccCCccCCCccccccccccceeecccCCcc-ccccCccccccccccE
Q 042766 469 QNLILFIASYNKLTGDLPQQ-LLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQF-SGVIPVTLSTCVSLEY 546 (914)
Q Consensus 469 ~~L~~L~l~~N~l~~~~p~~-~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~ 546 (914)
++|+.++++.|+.....+.. +..+..+ +.+++++|.+.+..|..+..++.|+.|+|++|++ .+.+|..|..+++|++
T Consensus 420 ~~L~~l~l~~~~~~~~~~~~~~~~l~~l-~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~ 498 (635)
T 4g8a_A 420 EQLEHLDFQHSNLKQMSEFSVFLSLRNL-IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 498 (635)
T ss_dssp TTCCEEECTTSEEESTTSSCTTTTCTTC-CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred ccccchhhhhcccccccccccccccccc-ccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCE
Confidence 99999999999887766654 4445555 8999999999999999999999999999999985 4568899999999999
Q ss_pred EEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCC-CcC-CCCCccCccCCC
Q 042766 547 LDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVK-GVF-SNKTKISLHGNV 624 (914)
Q Consensus 547 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~-~~~~~~~~~~n~ 624 (914)
|||++|+|++.+|.+|.++++|++|+|++|+|++..|..|.++++|++|||++|++++.+|.. ..+ .++..+.+.+||
T Consensus 499 L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np 578 (635)
T 4g8a_A 499 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQND 578 (635)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCC
T ss_pred EECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCC
Confidence 999999999999999999999999999999999999999999999999999999999988864 223 578889999999
Q ss_pred CCCCC
Q 042766 625 KLCGG 629 (914)
Q Consensus 625 ~lc~~ 629 (914)
+.|..
T Consensus 579 ~~C~C 583 (635)
T 4g8a_A 579 FACTC 583 (635)
T ss_dssp BCCSG
T ss_pred CcccC
Confidence 99953
No 23
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.7e-48 Score=457.09 Aligned_cols=462 Identities=19% Similarity=0.217 Sum_probs=339.6
Q ss_pred CCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccc
Q 042766 102 FLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVD 181 (914)
Q Consensus 102 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 181 (914)
..+++|+++|+++ .+|..+. ++|++|||++|++++..|..|+++++|++|+|++|++++..|++|+++++|++|+|+
T Consensus 32 ~~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 32 LESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp -CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 3488999999998 4787665 789999999999987777788888888888888888887778888888888888888
Q ss_pred cccccCcCCcccccccccceeecccCCCCC-CCCccchhhhcccccccccccccCCCCCcccccccc--ceeeccCCcc-
Q 042766 182 INYLTGQLPDSVGNLSAIEVIRITENSLGG-KIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSV--ELIFLTENRF- 257 (914)
Q Consensus 182 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~L~~N~l- 257 (914)
+|+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++. .+..+++| ++|++++|.+
T Consensus 109 ~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 109 HNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp TSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCC
T ss_pred CCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccc
Confidence 88888 56665 78888888888888876 3467777788888888888777642 34444444 6666666666
Q ss_pred -cCcccccccccCcccceeeccCccCCCCCCCcccccc--ccccccccCccCCcccc-ccccccccccceeccCCcCCCC
Q 042766 258 -SGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNAS--NLELLDLPSNQFKGKVS-IDFSSLKNLWLLNLEQNNLGTG 333 (914)
Q Consensus 258 -~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~ 333 (914)
++..| ..+..+. .+ .+++++|.+.+.++ ..+..+++|+.|++++|.....
T Consensus 183 ~~~~~~-------------------------~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 236 (562)
T 3a79_B 183 IKGGET-------------------------ESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQ 236 (562)
T ss_dssp CCSSSC-------------------------CEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHH
T ss_pred ccccCc-------------------------ccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccc
Confidence 44444 3333322 12 23444444443222 2334455555555555431100
Q ss_pred CCCCcchhhcccCCCCCcEEeccccccCCCc----CchhhccccccEEEEeecccccccCCccc-----cCCCCCcEEEc
Q 042766 334 TANDLDFVIFLSNCSSLKVLSLSDNQFGGEL----PHSIANLSLKMIELSVGRNQISGTIPPGI-----RNLVNLITFTL 404 (914)
Q Consensus 334 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~----p~~~~~~~~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L 404 (914)
. -...+..+..+++|+.|+++++.+.+.. +..+. ..+|++|++++|+++|.+|..+ ..+++|+.+++
T Consensus 237 ~--l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~--~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~ 312 (562)
T 3a79_B 237 R--LMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFW--PRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHV 312 (562)
T ss_dssp H--HHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHT--TSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEE
T ss_pred h--HHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhh--cccccEEEEeccEeeccccchhhhcccccchheehhhc
Confidence 0 0001223556667777777766665321 22211 1268888888888888888877 78888888888
Q ss_pred ccCcccccCC-hhhhcc---cCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCc
Q 042766 405 EVNQFHGTIP-DVISEL---KNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNK 480 (914)
Q Consensus 405 ~~N~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 480 (914)
+.|.+ .+| ..+..+ .+|++|++++|.+.... ....+++|++|+|++|++++.+|..++++++|+.|++++|+
T Consensus 313 ~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 388 (562)
T 3a79_B 313 KNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNG 388 (562)
T ss_dssp EECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSC
T ss_pred cccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCC
Confidence 88887 445 444443 67999999999886432 12678999999999999998899999999999999999999
Q ss_pred cCC--CCchhhhcccchhhhhcccCCccCCCccc-cccccccceeecccCCccccccCccccccccccEEEeeccccccc
Q 042766 481 LTG--DLPQQLLSITTLSLVLDLSNNLLNGSLPL-QVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGV 557 (914)
Q Consensus 481 l~~--~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 557 (914)
+++ .+|..+..+..+ ++|++++|++++.+|. .+..+++|++|+|++|++++.+|..+. ++|++|+|++|+++ .
T Consensus 389 l~~~~~~~~~~~~l~~L-~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ 464 (562)
T 3a79_B 389 LKNFFKVALMTKNMSSL-ETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-S 464 (562)
T ss_dssp CCBTTHHHHTTTTCTTC-CEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-C
T ss_pred cCCcccchhhhcCCCCC-CEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-c
Confidence 985 334567777877 8999999999985554 588899999999999999988877665 79999999999998 6
Q ss_pred CCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCCC
Q 042766 558 IPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVKG 610 (914)
Q Consensus 558 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 610 (914)
+|..+..+++|++|+|++|+|++..+..+..+++|+.|++++|+|+|+||..+
T Consensus 465 ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~ 517 (562)
T 3a79_B 465 IPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIR 517 (562)
T ss_dssp CCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHHHH
T ss_pred cChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcchHH
Confidence 77777799999999999999995444449999999999999999999998654
No 24
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.6e-47 Score=451.38 Aligned_cols=456 Identities=18% Similarity=0.179 Sum_probs=334.2
Q ss_pred EEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCC
Q 042766 80 TELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNN 159 (914)
Q Consensus 80 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 159 (914)
+.+|++++++++ +|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|||++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 689999999986 777664 89999999999999888889999999999999999999888999999999999999999
Q ss_pred cccCCCChhccccccccccccccccccC-cCCcccccccccceeecccCCCCCCCCccchhhhcc--cccccccccc--c
Q 042766 160 KLEGQIPKEIGNLLKLQRLSVDINYLTG-QLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRL--VNLNVAENQF--S 234 (914)
Q Consensus 160 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~ 234 (914)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|.+++ ..+..+++| ++|++++|++ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc---CchhhhhhceeeEEEeeccccccc
Confidence 999 67776 89999999999999997 457899999999999999999986 356666666 9999999999 8
Q ss_pred CCCCCcccccc-ccceeeccCCcccCcccccccccCcccceeeccCcc-----CCCCCCCccccccccccccccCccCCc
Q 042766 235 GMFPRSICNIS-SVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNN-----FVGSIPDSLSNASNLELLDLPSNQFKG 308 (914)
Q Consensus 235 ~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~-----l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 308 (914)
+..|..|..+. +.-.++++.|.+.+.++...+.++++|+.|++++|+ +.+ .+..+..+++|+.|+|+++.+++
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECH
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcH
Confidence 88999888865 222568899999988888778889999999999985 221 12346667778888887777664
Q ss_pred ccccc---ccccccccceeccCCcCCCCCCCCcchhhcc-----cCCCCCcEEeccccccCCCcC-chhhcc--ccccEE
Q 042766 309 KVSID---FSSLKNLWLLNLEQNNLGTGTANDLDFVIFL-----SNCSSLKVLSLSDNQFGGELP-HSIANL--SLKMIE 377 (914)
Q Consensus 309 ~~~~~---~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~~--~~~L~~ 377 (914)
..... ....++|++|++++|.+++. +|..+ ..++.|+.++++.|.+ .+| ..+..+ ..+++.
T Consensus 264 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~------ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~ 335 (562)
T 3a79_B 264 KCSVKLFQFFWPRPVEYLNIYNLTITER------IDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKM 335 (562)
T ss_dssp HHHHHHHHHHTTSSEEEEEEEEEEECSC------CCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSE
T ss_pred HHHHHHHHhhhcccccEEEEeccEeecc------ccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceE
Confidence 32111 11223677777777777633 22222 5556666666666665 344 222222 124666
Q ss_pred EEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeeccccccc--ccCccccCCCCCCeEEeeCC
Q 042766 378 LSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRG--GIPSGLGNLTKLGSLDLGSN 455 (914)
Q Consensus 378 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N 455 (914)
|++++|.+.... ....+++|++|++++|++++.+|..+..+++|++|+|++|++++ .+|..|.++++|++|+|++|
T Consensus 336 L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N 413 (562)
T 3a79_B 336 LSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLN 413 (562)
T ss_dssp EEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTS
T ss_pred EEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCC
Confidence 677766664322 12456666666666666666666666666666666666666664 22345666666666666666
Q ss_pred cCCCCCCC-ccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCcccccc
Q 042766 456 SLQGNIPS-SLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVI 534 (914)
Q Consensus 456 ~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 534 (914)
++++.+|. .+..+++|+.|++++|+++ +..|..+. ++|++|+|++|+++ .+
T Consensus 414 ~l~~~~~~~~~~~l~~L~~L~l~~n~l~-------------------------~~~~~~l~--~~L~~L~L~~N~l~-~i 465 (562)
T 3a79_B 414 SLNSHAYDRTCAWAESILVLNLSSNMLT-------------------------GSVFRCLP--PKVKVLDLHNNRIM-SI 465 (562)
T ss_dssp CCBSCCSSCCCCCCTTCCEEECCSSCCC-------------------------GGGGSSCC--TTCSEEECCSSCCC-CC
T ss_pred cCCCccChhhhcCcccCCEEECCCCCCC-------------------------cchhhhhc--CcCCEEECCCCcCc-cc
Confidence 66653333 3555566655555555554 34443333 57899999999998 56
Q ss_pred CccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccC
Q 042766 535 PVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIP 583 (914)
Q Consensus 535 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 583 (914)
|..+..+++|++|+|++|++++..+..|..+++|+.|++++|++.+..|
T Consensus 466 p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 466 PKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred ChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 6666689999999999999985444448899999999999999987654
No 25
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.6e-46 Score=409.56 Aligned_cols=293 Identities=29% Similarity=0.469 Sum_probs=276.7
Q ss_pred CCCHhHHHHHHHHHHhcCCCCCCCCCCCCCCCCCC--ccceeecCCC--CceEEEecCCCCCcc--ccCCCCCCCCCCCE
Q 042766 32 QTNETDRLALLAIKSQLHDPSGVTSSWNNTMNFCQ--WTGVTCGHRH--QRLTELNLSSQRIGG--VLSPYVGNLSFLRY 105 (914)
Q Consensus 32 ~~~~~~~~aLl~~k~~~~~~~~~~~~w~~~~~~c~--w~gv~C~~~~--~~v~~l~l~~~~l~~--~~~~~l~~l~~L~~ 105 (914)
.|.++|++||++||+++.||. .+.+|..+.|||. |.||+|+..+ ++|+.|+|+++.+.| .+|+.++++++|++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~ 80 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF 80 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSE
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCe
Confidence 478999999999999998776 7889988889998 9999998655 899999999999999 89999999999999
Q ss_pred EEcCC-CCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccccccccccccccc
Q 042766 106 INLAD-NGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINY 184 (914)
Q Consensus 106 L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 184 (914)
|+|++ |.+++.+|..|+++++|++|+|++|++++.+|..++++++|++|+|++|++++.+|..++.+++|++|+|++|+
T Consensus 81 L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred eeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 99995 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcCCccccccc-ccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccc
Q 042766 185 LTGQLPDSVGNLS-AIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPF 263 (914)
Q Consensus 185 l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 263 (914)
++|.+|..++.++ +|++|++++|++++.+|..++.++ |++|+|++|++++..|..|..+++|++|+|++|++++.+|.
T Consensus 161 l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 239 (313)
T 1ogq_A 161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK 239 (313)
T ss_dssp CEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG
T ss_pred ccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc
Confidence 9999999999998 999999999999999999999997 99999999999999999999999999999999999987765
Q ss_pred cccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCc
Q 042766 264 DILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNN 329 (914)
Q Consensus 264 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 329 (914)
+..+++|++|+|++|++++.+|..|..+++|++|+|++|++++.+|.. ..+++|+.|++++|.
T Consensus 240 --~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 240 --VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp --CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred --ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 558899999999999999999999999999999999999999888876 888999999999887
No 26
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.6e-44 Score=413.48 Aligned_cols=401 Identities=22% Similarity=0.288 Sum_probs=182.3
Q ss_pred CCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeec
Q 042766 125 FRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRI 204 (914)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 204 (914)
++|++|++++|.+ |.+|.+++++++|++|++++|+++|.+|..++++++|+.++++.+.. .++++|++
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L~l 78 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHELEL 78 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEEEC
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEEEe
Confidence 4455555555555 45555555555555555555555555555555555554444444331 23444455
Q ss_pred ccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCC
Q 042766 205 TENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVG 284 (914)
Q Consensus 205 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~ 284 (914)
++|.+++ +|.. .++|++|++++|++++ +|.. +++|++|++++|++++. |. ..++|++|++++|++++
T Consensus 79 ~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~----~~~~L~~L~L~~n~l~~ 145 (454)
T 1jl5_A 79 NNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SD----LPPLLEYLGVSNNQLEK 145 (454)
T ss_dssp TTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CS----CCTTCCEEECCSSCCSS
T ss_pred cCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cC----CCCCCCEEECcCCCCCC
Confidence 5554443 2221 1345555555555554 3322 24455555555555432 11 11455555555555553
Q ss_pred CCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCc
Q 042766 285 SIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGEL 364 (914)
Q Consensus 285 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 364 (914)
+| .|+++++|++|++++|+++++ |.. .++|++|++++|++++.+ .++++++|++|++++|++++ +
T Consensus 146 -lp-~~~~l~~L~~L~l~~N~l~~l-p~~---~~~L~~L~L~~n~l~~l~--------~~~~l~~L~~L~l~~N~l~~-l 210 (454)
T 1jl5_A 146 -LP-ELQNSSFLKIIDVDNNSLKKL-PDL---PPSLEFIAAGNNQLEELP--------ELQNLPFLTAIYADNNSLKK-L 210 (454)
T ss_dssp -CC-CCTTCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSSCC--------CCTTCTTCCEEECCSSCCSS-C
T ss_pred -Cc-ccCCCCCCCEEECCCCcCccc-CCC---cccccEEECcCCcCCcCc--------cccCCCCCCEEECCCCcCCc-C
Confidence 44 355555555555555555542 222 135555555555555431 14555566666666666553 3
Q ss_pred CchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCC
Q 042766 365 PHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNL 444 (914)
Q Consensus 365 p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 444 (914)
|... .+|++|++++|+++ .+| .|+.+++|++|++++|++++ +|.. +++|++|++++|++++ +|.. .
T Consensus 211 ~~~~----~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~ 276 (454)
T 1jl5_A 211 PDLP----LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---P 276 (454)
T ss_dssp CCCC----TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---C
T ss_pred CCCc----CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---c
Confidence 3221 24566666666665 344 36666666666666666664 3322 3566666666666664 3432 2
Q ss_pred CCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeec
Q 042766 445 TKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLD 524 (914)
Q Consensus 445 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 524 (914)
++|+.|++++|++++ +|.. .++|+.|++++|++++ ++ ....-+++|++++|++++ +|.. +++|++|+
T Consensus 277 ~~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~ 343 (454)
T 1jl5_A 277 QSLTFLDVSENIFSG-LSEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLI 343 (454)
T ss_dssp TTCCEEECCSSCCSE-ESCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEE
T ss_pred CcCCEEECcCCccCc-ccCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEE
Confidence 566666666666664 2211 1456666666666653 22 111112566666666664 4433 35667777
Q ss_pred ccCCccccccCccccccccccEEEeecccccc--cCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCcc
Q 042766 525 ISSNQFSGVIPVTLSTCVSLEYLDISINSFYG--VIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYF 602 (914)
Q Consensus 525 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 602 (914)
+++|++++ +|. .+++|++|+|++|++++ .+|.++..+ +.|++.+.+|.. +++|+.||+++|++
T Consensus 344 L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i~~~---~~~L~~L~ls~N~l 408 (454)
T 1jl5_A 344 ASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAEVPEL---PQNLKQLHVETNPL 408 (454)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC-------------------------
T ss_pred CCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhcccccccccc---cCcCCEEECCCCcC
Confidence 77777764 343 35667777777777766 555554432 335555555543 35667777777777
Q ss_pred cc--ccC
Q 042766 603 EG--EVP 607 (914)
Q Consensus 603 ~~--~~p 607 (914)
+| .+|
T Consensus 409 ~~~~~iP 415 (454)
T 1jl5_A 409 REFPDIP 415 (454)
T ss_dssp -------
T ss_pred Cccccch
Confidence 66 555
No 27
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=7.5e-44 Score=407.84 Aligned_cols=428 Identities=21% Similarity=0.249 Sum_probs=205.6
Q ss_pred CCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccc
Q 042766 94 SPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLL 173 (914)
Q Consensus 94 ~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 173 (914)
.|.-...++|++|++++|.+ |.+|.+++++++|++|++++|+++|.+|.+++++++|+.++++.|.. .
T Consensus 4 ~p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~ 71 (454)
T 1jl5_A 4 NPRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------R 71 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------H
T ss_pred cccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------c
Confidence 34444568899999999999 79999999999999999999999999999999988886555554432 3
Q ss_pred cccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeecc
Q 042766 174 KLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLT 253 (914)
Q Consensus 174 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 253 (914)
+|++|++++|.+++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|++++. |.. .++|++|+++
T Consensus 72 ~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~ 139 (454)
T 1jl5_A 72 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVS 139 (454)
T ss_dssp TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECC
T ss_pred CCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECc
Confidence 45555555555553 3331 2455555666665554 4432 24555566666655532 211 1455666666
Q ss_pred CCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCC
Q 042766 254 ENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTG 333 (914)
Q Consensus 254 ~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 333 (914)
+|++++ +| + +.++++|++|++++|++++ +|..+ ++|++|++++|++++. | .|.++++|++|++++|.++++
T Consensus 140 ~n~l~~-lp-~-~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l-~-~~~~l~~L~~L~l~~N~l~~l 210 (454)
T 1jl5_A 140 NNQLEK-LP-E-LQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEEL-P-ELQNLPFLTAIYADNNSLKKL 210 (454)
T ss_dssp SSCCSS-CC-C-CTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSSC
T ss_pred CCCCCC-Cc-c-cCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcC-c-cccCCCCCCEEECCCCcCCcC
Confidence 666654 34 2 4455666666666666553 34332 3566666666666552 2 355666666666666665543
Q ss_pred CCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccC
Q 042766 334 TANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTI 413 (914)
Q Consensus 334 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 413 (914)
+.. .++|++|++++|+++ .+|. +..+. +|++|++++|++++ +|.. +++|++|++++|++++ +
T Consensus 211 ~~~----------~~~L~~L~l~~n~l~-~lp~-~~~l~-~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l 272 (454)
T 1jl5_A 211 PDL----------PLSLESIVAGNNILE-ELPE-LQNLP-FLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-L 272 (454)
T ss_dssp CCC----------CTTCCEEECCSSCCS-SCCC-CTTCT-TCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-C
T ss_pred CCC----------cCcccEEECcCCcCC-cccc-cCCCC-CCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-c
Confidence 211 135666666666665 4553 44433 46666666666654 3322 2566666666666664 3
Q ss_pred ChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCchhhhccc
Q 042766 414 PDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSIT 493 (914)
Q Consensus 414 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 493 (914)
|.. .++|++|++++|++++. |.. .++|+.|++++|++++ ++.. .++|+.|++++|++++ +|..+ .
T Consensus 273 ~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~~~---~~~L~~L~Ls~N~l~~-lp~~~---~ 337 (454)
T 1jl5_A 273 PEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LCDL---PPSLEELNVSNNKLIE-LPALP---P 337 (454)
T ss_dssp CCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-ECCC---CTTCCEEECCSSCCSC-CCCCC---T
T ss_pred Ccc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-ccCC---cCcCCEEECCCCcccc-ccccC---C
Confidence 332 35666677777666652 211 1466677777776664 2211 1366677777777764 55432 3
Q ss_pred chhhhhcccCCccCCCccccccccccceeecccCCcccc--ccCccccccccccEEEeecccccccCCcchhccCCCCEE
Q 042766 494 TLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSG--VIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKAL 571 (914)
Q Consensus 494 ~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 571 (914)
.+ ++|++++|+++ .+|. .+++|++|+|++|++++ .+|.++.. |+.|.+.+.+|.. +++|+.|
T Consensus 338 ~L-~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L 401 (454)
T 1jl5_A 338 RL-ERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQL 401 (454)
T ss_dssp TC-CEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC------------------
T ss_pred cC-CEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEE
Confidence 33 67788888887 4555 46889999999999998 66766543 4568888888864 5789999
Q ss_pred EccCCcccc--ccCccccccCCCCeEeCCCCccccccCCC
Q 042766 572 NVSSNNLSG--KIPEFLENLSFLEFLNLSYNYFEGEVPVK 609 (914)
Q Consensus 572 ~Ls~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 609 (914)
|+++|++++ .+|.+ ++.|.+.+|.+.+.+|..
T Consensus 402 ~ls~N~l~~~~~iP~s------l~~L~~~~~~~~~~~~~~ 435 (454)
T 1jl5_A 402 HVETNPLREFPDIPES------VEDLRMNSERVVDPYEFA 435 (454)
T ss_dssp ----------------------------------------
T ss_pred ECCCCcCCccccchhh------HhheeCcCcccCCccccC
Confidence 999999997 66654 566778999998877654
No 28
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.4e-43 Score=408.69 Aligned_cols=374 Identities=19% Similarity=0.227 Sum_probs=262.7
Q ss_pred eecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCcc
Q 042766 202 IRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNN 281 (914)
Q Consensus 202 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~ 281 (914)
++.+++.++ .+|. + .++|++|+|++|++++..|..|.++++|++|+|++|.+.+.++...+.++++|++|+|++|+
T Consensus 15 ~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~ 90 (455)
T 3v47_A 15 AICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQ 90 (455)
T ss_dssp EECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCT
T ss_pred cCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCc
Confidence 444444444 3333 1 14555666666666555555666666666666666666555555555566666666666666
Q ss_pred CCCCCCCccccccccccccccCccCCcccccc--ccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccc
Q 042766 282 FVGSIPDSLSNASNLELLDLPSNQFKGKVSID--FSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQ 359 (914)
Q Consensus 282 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~ 359 (914)
+++..|..|.++++|++|+|++|++++..+.. |..+++|++|+|++|.+++.... ..+.++++|++|++++|+
T Consensus 91 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 91 FLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPA-----SFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp TCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCC-----GGGGGCTTCCEEECTTCC
T ss_pred cCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcc-----cccCCCCcccEEeCCCCc
Confidence 66666666666777777777777766543333 66667777777777766655211 125666777777777777
Q ss_pred cCCCcCchhhccc-cccEEEEeecccccccCCcc--------ccCCCCCcEEEcccCcccccCChhhhcc---cCCceee
Q 042766 360 FGGELPHSIANLS-LKMIELSVGRNQISGTIPPG--------IRNLVNLITFTLEVNQFHGTIPDVISEL---KNLQQLS 427 (914)
Q Consensus 360 l~~~~p~~~~~~~-~~L~~L~L~~N~l~~~~p~~--------~~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~ 427 (914)
+++..|..+..+. .+++.|++++|.+.+..+.. +..+++|++|++++|++++..|..+... ++|+.|+
T Consensus 166 l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~ 245 (455)
T 3v47_A 166 VKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLI 245 (455)
T ss_dssp BSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEE
T ss_pred ccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEe
Confidence 7766666665542 35777777777777655443 3356788888999988888888877765 7888888
Q ss_pred eccccccccc----------CccccC--CCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCchhhhcccch
Q 042766 428 VFNNFLRGGI----------PSGLGN--LTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTL 495 (914)
Q Consensus 428 L~~N~l~~~~----------p~~~~~--l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l 495 (914)
+++|.+.+.. +..+.. .++|+.|++++|++++.+|..++.+++|+
T Consensus 246 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~----------------------- 302 (455)
T 3v47_A 246 LSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLE----------------------- 302 (455)
T ss_dssp CTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCC-----------------------
T ss_pred eccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCC-----------------------
Confidence 8888665421 111221 13555666666666555555555555554
Q ss_pred hhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccC
Q 042766 496 SLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSS 575 (914)
Q Consensus 496 ~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 575 (914)
+|++++|++++..|..|+++++|++|+|++|++++.+|..|+.+++|++|+|++|++++..|.+|..+++|++|+|++
T Consensus 303 --~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 380 (455)
T 3v47_A 303 --QLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDT 380 (455)
T ss_dssp --EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred --EEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCC
Confidence 455555555556677888899999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCccccccCCCCeEeCCCCccccccCCC
Q 042766 576 NNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVK 609 (914)
Q Consensus 576 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 609 (914)
|++++..+..+..+++|+.|++++|+++|.||..
T Consensus 381 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 381 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CccccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 9999888888899999999999999999999964
No 29
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.6e-43 Score=406.29 Aligned_cols=368 Identities=17% Similarity=0.219 Sum_probs=306.2
Q ss_pred CCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcC-CCCccccCCcchhccCCCcccCCCChhccccccccccc
Q 042766 101 SFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTI-PTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLS 179 (914)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 179 (914)
++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 67889999999998888888889999999999999887666 45688899999999999998887888888899999999
Q ss_pred cccccccCcCCcc--cccccccceeecccCCCCCCCCcc-chhhhcccccccccccccCCCCCccccc--cccceeeccC
Q 042766 180 VDINYLTGQLPDS--VGNLSAIEVIRITENSLGGKIPTT-LGLLRRLVNLNVAENQFSGMFPRSICNI--SSVELIFLTE 254 (914)
Q Consensus 180 L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~L~~ 254 (914)
|++|++++..|.. |+++++|++|+|++|.+++..|.. ++++++|++|++++|++++..|..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999988755544 888889999999999998887776 7888999999999999988888888776 6888999999
Q ss_pred CcccCcccccc-------cccCcccceeeccCccCCCCCCCccccc---cccccccccCccCCcccccccccccccccee
Q 042766 255 NRFSGIFPFDI-------LLNLPNLKKLGIGGNNFVGSIPDSLSNA---SNLELLDLPSNQFKGKVSIDFSSLKNLWLLN 324 (914)
Q Consensus 255 N~l~~~~p~~~-------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 324 (914)
|.+.+..+..+ +..+++|++|+|++|++.+..|..+... ++|+.|++++|.+.+...
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~------------- 256 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF------------- 256 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT-------------
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc-------------
Confidence 98886543321 2256789999999999988888777665 889999999998764321
Q ss_pred ccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEc
Q 042766 325 LEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTL 404 (914)
Q Consensus 325 L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 404 (914)
..+.+.......+ .-...++|+.|++++|++++..|..+..+. +|++|++++|++++..|..|.++++|++|+|
T Consensus 257 -~~~~~~~~~~~~~----~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 330 (455)
T 3v47_A 257 -GHTNFKDPDNFTF----KGLEASGVKTCDLSKSKIFALLKSVFSHFT-DLEQLTLAQNEINKIDDNAFWGLTHLLKLNL 330 (455)
T ss_dssp -TCCSSCCCCTTTT----GGGTTSCCCEEECCSSCCCEECTTTTTTCT-TCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred -chhhhccCccccc----ccccccCceEEEecCccccccchhhcccCC-CCCEEECCCCcccccChhHhcCcccCCEEEC
Confidence 1222222211110 011346899999999999988888887776 6999999999999999999999999999999
Q ss_pred ccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCC
Q 042766 405 EVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGD 484 (914)
Q Consensus 405 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 484 (914)
++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|+.|++++|++++.
T Consensus 331 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 331 SQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp CSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC
Confidence 99999998899999999999999999999998899999999999999999999987778889999999999999999988
Q ss_pred Cch
Q 042766 485 LPQ 487 (914)
Q Consensus 485 ~p~ 487 (914)
.|.
T Consensus 411 ~~~ 413 (455)
T 3v47_A 411 CPR 413 (455)
T ss_dssp TTT
T ss_pred CCc
Confidence 873
No 30
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.6e-43 Score=377.73 Aligned_cols=189 Identities=23% Similarity=0.374 Sum_probs=166.9
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|++.+.||+|+||+||+|+++.+++.||||+++.. +....+.+.+|++++++++|||||++++++ +..+.
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-----~~~~~ 106 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF-----QDDEK 106 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCCE
Confidence 5799999999999999999999999999999999743 344567899999999999999999999995 44558
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.|+|||||+||+|.+++.+. ..+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||
T Consensus 107 ~yivmEy~~gG~L~~~i~~~------~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFG 177 (311)
T 4aw0_A 107 LYFGLSYAKNGELLKYIRKI------GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFG 177 (311)
T ss_dssp EEEEECCCTTEEHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcC
Confidence 99999999999999999865 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
+|+.+..... .......+||+.|||||++. +.++||||+||++|||
T Consensus 178 la~~~~~~~~------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyem 227 (311)
T 4aw0_A 178 TAKVLSPESK------QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 227 (311)
T ss_dssp TCEECCTTTT------CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred CceecCCCCC------cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHH
Confidence 9997653221 11223568999999999995 5899999999999998
No 31
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.2e-43 Score=382.45 Aligned_cols=187 Identities=23% Similarity=0.346 Sum_probs=166.8
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
+.|+..+.||+|+||+||+|+++.+|+.||||+++.......+.+.+|++++++++|||||++++++.. .+..|+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-----~~~~~i 148 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-----GDELWV 148 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEE-----TTEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-----CCEEEE
Confidence 469999999999999999999999999999999987766667789999999999999999999999644 458999
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
|||||+||+|.+++.+ ..+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+
T Consensus 149 vmEy~~gg~L~~~l~~-------~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~ 218 (346)
T 4fih_A 149 VMEFLEGGALTDIVTH-------TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 218 (346)
T ss_dssp EECCCTTEEHHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCce
Confidence 9999999999999875 3589999999999999999999999 99999999999999999999999999998
Q ss_pred cccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~f 914 (914)
.+.... ......+||+.|||||++ ++.++||||+||++|||.
T Consensus 219 ~~~~~~--------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml 264 (346)
T 4fih_A 219 QVSKEV--------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 264 (346)
T ss_dssp ECCSSS--------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred ecCCCC--------CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHH
Confidence 764321 122346899999999999 468999999999999983
No 32
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.8e-43 Score=382.25 Aligned_cols=190 Identities=21% Similarity=0.317 Sum_probs=160.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|++.+.||+|+||+||+|+++.+++.||||+++... ....+.+.+|++++++++|||||++++++. ..+..
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~-----~~~~~ 98 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFE-----ENGSL 98 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEE-----ECCEE
Confidence 58999999999999999999999999999999997543 234568999999999999999999999954 34589
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
|+|||||+||+|.+++...+. ..+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+
T Consensus 99 yiVmEy~~gg~L~~~i~~~~~----~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGl 171 (350)
T 4b9d_A 99 YIVMDYCEGGDLFKRINAQKG----VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGI 171 (350)
T ss_dssp EEEEECCTTCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTE
T ss_pred EEEEeCCCCCcHHHHHHHcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEccccc
Confidence 999999999999999976532 4678999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+.+.... ......+||+.|||||++. +.++||||+||++|||.
T Consensus 172 a~~~~~~~--------~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyeml 219 (350)
T 4b9d_A 172 ARVLNSTV--------ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELC 219 (350)
T ss_dssp ESCCCHHH--------HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ceeecCCc--------ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHH
Confidence 98764321 1122468999999999994 58999999999999983
No 33
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.1e-41 Score=390.36 Aligned_cols=363 Identities=18% Similarity=0.194 Sum_probs=272.6
Q ss_pred ccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccc
Q 042766 92 VLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGN 171 (914)
Q Consensus 92 ~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 171 (914)
..+..++++++|++|++++|.+++ +| .++.+++|++|+|++|++++ +| ++.+++|++|++++|++++. | +++
T Consensus 33 ~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~ 104 (457)
T 3bz5_A 33 TDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTP 104 (457)
T ss_dssp TSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTT
T ss_pred ccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCC
Confidence 334456677778888888888875 35 57778888888888888875 34 77788888888888888753 3 777
Q ss_pred cccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceee
Q 042766 172 LLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIF 251 (914)
Q Consensus 172 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 251 (914)
+++|++|++++|++++ +| ++.+++|++|++++|++++. | ++.+++|++|++++|+..+.+ .+..+++|++|+
T Consensus 105 l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 176 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLD 176 (457)
T ss_dssp CTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEE
Confidence 8888888888888875 34 77788888888888888763 3 777788888888888655554 477788888888
Q ss_pred ccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCC
Q 042766 252 LTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLG 331 (914)
Q Consensus 252 L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 331 (914)
+++|++++. | +..+++|++|++++|++++. .++.+++|++|+|++|+++++ | +..+++|++|++++|+++
T Consensus 177 ls~n~l~~l-~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~~N~l~ 246 (457)
T 3bz5_A 177 CSFNKITEL-D---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCSVNPLT 246 (457)
T ss_dssp CCSSCCCCC-C---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCS
T ss_pred CCCCcccee-c---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--ccccCCCCEEEeeCCcCC
Confidence 888888763 4 45778888888888888864 377888888888888888874 3 778888888888888887
Q ss_pred CCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccc
Q 042766 332 TGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHG 411 (914)
Q Consensus 332 ~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 411 (914)
+.+ +..+++|+.|+++.|++ +.|++++|.+.+.+| ++.+++|+.|++++|++.+
T Consensus 247 ~~~---------~~~l~~L~~L~l~~n~L---------------~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~ 300 (457)
T 3bz5_A 247 ELD---------VSTLSKLTTLHCIQTDL---------------LEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLY 300 (457)
T ss_dssp CCC---------CTTCTTCCEEECTTCCC---------------SCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCC
T ss_pred CcC---------HHHCCCCCEEeccCCCC---------------CEEECCCCccCCccc--ccccccCCEEECCCCcccc
Confidence 753 34677888888887754 356777888777776 4678889999999998877
Q ss_pred cCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCchhhhc
Q 042766 412 TIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLS 491 (914)
Q Consensus 412 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 491 (914)
.+|. ..++|+.|++++| ++|++|+|++|++++. + ++++++|+.|++++|++++ +
T Consensus 301 ~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~-l------ 354 (457)
T 3bz5_A 301 LLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD-F------ 354 (457)
T ss_dssp EEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB-C------
T ss_pred eecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC-c------
Confidence 7774 3466777766655 6788999999999874 3 8888899999999888885 2
Q ss_pred ccchhhhhcccCCccCCCccccccccccceeecccCCccccccCcccc
Q 042766 492 ITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLS 539 (914)
Q Consensus 492 ~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 539 (914)
..+ ..|++++|.++|. +.+..|..+++++|+++|.+|..+.
T Consensus 355 -~~L-~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~ 395 (457)
T 3bz5_A 355 -SSV-GKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLL 395 (457)
T ss_dssp -TTG-GGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCB
T ss_pred -ccc-ccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHh
Confidence 223 5677888888765 3556777888888888888876543
No 34
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=384.84 Aligned_cols=187 Identities=23% Similarity=0.346 Sum_probs=167.3
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
+.|+..+.||+|+||+||+|+++.+|+.||||+++.......+.+.+|+++|++++|||||++++++.. .+..|+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-----~~~~~i 225 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-----GDELWV 225 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE-----TTEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEE-----CCEEEE
Confidence 569999999999999999999999999999999987766667789999999999999999999999654 458999
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAK 864 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~ 864 (914)
|||||+||+|.++++. ..+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+
T Consensus 226 VmEy~~gG~L~~~i~~-------~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~ 295 (423)
T 4fie_A 226 VMEFLEGGALTDIVTH-------TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 295 (423)
T ss_dssp EEECCTTEEHHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHhc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccce
Confidence 9999999999999964 3589999999999999999999999 99999999999999999999999999998
Q ss_pred cccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~f 914 (914)
.+.... ......+||+.|||||++ ++.++||||+||++|||+
T Consensus 296 ~~~~~~--------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml 341 (423)
T 4fie_A 296 QVSKEV--------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 341 (423)
T ss_dssp ECCSSC--------CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred ECCCCC--------ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHH
Confidence 764321 122356899999999999 469999999999999983
No 35
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.2e-42 Score=372.31 Aligned_cols=196 Identities=25% Similarity=0.421 Sum_probs=163.5
Q ss_pred hcccccCcccCCccEEEEEEEEC-----CCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILG-----DDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
++|.+.+.||+|+||+||+|++. .+++.||||+++.......++|.+|++++++++|||||+++|+|...
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~----- 87 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG----- 87 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC-----
Confidence 57888999999999999999975 35789999999766656678899999999999999999999997543
Q ss_pred ceEeEEEecccCCCHHHHHhccCC-------cccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC
Q 042766 780 DFKALVFEYMENGSLEDWLHQSND-------QVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD 852 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~ 852 (914)
+..++|||||++|+|.++++..+. ......+++.++++|+.||+.||+|||++ +||||||||+|||++.+
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 164 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCC
Confidence 478999999999999999976431 11235799999999999999999999999 99999999999999999
Q ss_pred CcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 853 MVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 853 ~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++||+|||+|+......... ......||+.|||||++. +.++|||||||++|||+
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~~------~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ell 224 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYYR------VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIF 224 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCEE------ETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred CcEEECCcccceecCCCCcee------ecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHH
Confidence 999999999998764432111 112356999999999995 59999999999999984
No 36
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=5.9e-42 Score=364.14 Aligned_cols=190 Identities=25% Similarity=0.409 Sum_probs=160.7
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
|+..+.||+|+||+||+|+++.+++.||+|++.... ....+++.+|++++++++|||||++++++.... ......++
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-~~~~~~~l 106 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIVL 106 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE-TTEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc-CCCcEEEE
Confidence 366678999999999999999999999999997443 334567999999999999999999999875421 23456899
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC-CCcEEEeccccc
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY-DMVAHVGDFGLA 863 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DFGla 863 (914)
|||||+||+|.+++++. ..+++..+..|+.||+.||+|||++ .++||||||||+|||++. +|.+||+|||+|
T Consensus 107 vmEy~~gg~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla 179 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRF------KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEECCCSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEeCCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCC
Confidence 99999999999999865 4689999999999999999999998 123999999999999984 799999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh---hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---~~~~Di~s~g~~~~~~f 914 (914)
+..... .....+||+.|||||++. +.++||||+||++|||.
T Consensus 180 ~~~~~~----------~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyell 223 (290)
T 3fpq_A 180 TLKRAS----------FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMA 223 (290)
T ss_dssp GGCCTT----------SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHH
T ss_pred EeCCCC----------ccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHH
Confidence 854221 123468999999999995 58999999999999973
No 37
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.9e-42 Score=372.87 Aligned_cols=196 Identities=26% Similarity=0.430 Sum_probs=158.4
Q ss_pred hcccccCcccCCccEEEEEEEEC-----CCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILG-----DDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
++|...++||+|+||+||+|+++ .+++.||||+++.......++|.+|++++++++|||||+++|+|...
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~----- 115 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEG----- 115 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----
Confidence 46788899999999999999975 36789999999766666678899999999999999999999997543
Q ss_pred ceEeEEEecccCCCHHHHHhccCCc---------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQ---------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 850 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~ 850 (914)
...++|||||++|+|.++++..+.. ....++++.++++|+.||+.||+|||++ +||||||||+|||++
T Consensus 116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVG 192 (329)
T ss_dssp SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEEC
Confidence 4789999999999999999865321 1224699999999999999999999999 999999999999999
Q ss_pred CCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 851 YDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 851 ~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.++++||+|||+|+........ ......+||+.|||||++. +.++|||||||++|||+
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~------~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ell 254 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDYY------RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254 (329)
T ss_dssp TTTEEEECCCC----------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEcccccceeccCCCcc------eecCcccccccccChhhhcCCCCCccccccchHHHHHHHH
Confidence 9999999999999876432211 1122457999999999994 58999999999999984
No 38
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=7.8e-42 Score=366.84 Aligned_cols=204 Identities=23% Similarity=0.396 Sum_probs=156.6
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCC------
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDF------ 776 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 776 (914)
.++|++.+.||+|+||+||+|+++.+++.||||+++.... ...+.+.+|++++++++|||||++++++...+.
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 3579999999999999999999999999999999975443 345688999999999999999999998754331
Q ss_pred -CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcE
Q 042766 777 -EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVA 855 (914)
Q Consensus 777 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 855 (914)
....+.|+|||||++|+|.+++..... ....++..++.|+.||+.||+|||++ +||||||||+|||++.++.+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~v 157 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCT---IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVV 157 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCS---GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCC---CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcE
Confidence 123357999999999999999986542 13356677889999999999999999 99999999999999999999
Q ss_pred EEeccccccccccccccccc----CCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 856 HVGDFGLAKFLSNHHLDIAS----KTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 856 ki~DFGla~~~~~~~~~~~~----~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
||+|||+|+.+......... .........+||+.|||||++. +.++||||+||++|||
T Consensus 158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyel 223 (299)
T 4g31_A 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223 (299)
T ss_dssp EECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHH
Confidence 99999999987543221110 1112234568999999999994 5899999999999998
No 39
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.2e-42 Score=367.96 Aligned_cols=188 Identities=30% Similarity=0.462 Sum_probs=155.8
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.+++++.+.||+|+||+||+|++++ .||||+++... ....++|.+|++++++++|||||+++|+|.. +.
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~------~~ 105 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------DN 105 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC------Ce
Confidence 3577888999999999999999763 48999987443 2345689999999999999999999998642 24
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++|||||+||+|.+++...+ ..+++.++++|+.|||.||+|||++ +||||||||+|||+++++++||+|||
T Consensus 106 ~~iVmEy~~gGsL~~~l~~~~-----~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFG 177 (307)
T 3omv_A 106 LAIVTQWCEGSSLYKHLHVQE-----TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFG 177 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCS
T ss_pred EEEEEEcCCCCCHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeecc
Confidence 689999999999999997653 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-------hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~f 914 (914)
+|+........ ......+||+.|||||++. +.++|||||||++|||+
T Consensus 178 la~~~~~~~~~------~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Ell 231 (307)
T 3omv_A 178 LATVKSRWSGS------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELM 231 (307)
T ss_dssp SCBC------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHH
T ss_pred CceecccCCcc------eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHH
Confidence 99875432211 1123468999999999984 46899999999999984
No 40
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4e-42 Score=371.56 Aligned_cols=188 Identities=26% Similarity=0.290 Sum_probs=158.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
...|+..++||+|+||+||+|+++.+|+.||||+++.+.. ..+|++++++++|||||++++++.. .+..|
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~-----~~~~~ 126 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVRE-----GPWVN 126 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEE-----TTEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEE-----CCEEE
Confidence 3568888999999999999999999999999999975432 2469999999999999999999644 45899
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC-cEEEecccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM-VAHVGDFGL 862 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~-~~ki~DFGl 862 (914)
+|||||+||+|.+++++. ..+++.++..|+.||+.||+|||++ +||||||||+|||++.+| ++||+|||+
T Consensus 127 ivmEy~~gg~L~~~l~~~------~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGl 197 (336)
T 4g3f_A 127 IFMELLEGGSLGQLIKQM------GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGH 197 (336)
T ss_dssp EEECCCTTCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTT
T ss_pred EEEeccCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCC
Confidence 999999999999999865 3689999999999999999999999 999999999999999998 699999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
|+.+....... ........+||+.|||||++. +.++||||+||++|||
T Consensus 198 a~~~~~~~~~~---~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyem 249 (336)
T 4g3f_A 198 ALCLQPDGLGK---SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHM 249 (336)
T ss_dssp CEEC---------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred CeEccCCCccc---ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHH
Confidence 99765432111 111223468999999999995 5889999999999998
No 41
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.5e-42 Score=359.60 Aligned_cols=186 Identities=28% Similarity=0.386 Sum_probs=150.2
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|++.+.||+|+||+||+|+++.+++.||||+++... ....+++.+|++++++++|||||++++++. ..+
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~-----~~~ 86 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-----SKD 86 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSS
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-----ECC
Confidence 368999999999999999999999999999999997442 334568999999999999999999999954 445
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..|+||||+ +|+|.+++.+. ..+++.++..++.||+.||+|||++ +|+||||||+|||++.++++||+||
T Consensus 87 ~~~ivmEy~-~g~L~~~l~~~------~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DF 156 (275)
T 3hyh_A 87 EIIMVIEYA-GNELFDYIVQR------DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADF 156 (275)
T ss_dssp EEEEEEECC-CEEHHHHHHHS------CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCS
T ss_pred EEEEEEeCC-CCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeec
Confidence 899999999 67999999765 4689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCccccccccc
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~ 913 (914)
|+|+...+.. .....+||+.|||||++. +.++||||+||++|||
T Consensus 157 Gla~~~~~~~---------~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~l 205 (275)
T 3hyh_A 157 GLSNIMTDGN---------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM 205 (275)
T ss_dssp SCC------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHH
T ss_pred CCCeecCCCC---------ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHH
Confidence 9998654321 122468999999999994 3689999999999997
No 42
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.6e-41 Score=365.29 Aligned_cols=196 Identities=22% Similarity=0.346 Sum_probs=162.2
Q ss_pred hcccccCcccCCccEEEEEEEEC-----CCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILG-----DDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
+++++.+.||+|+||+||+|++. .+++.||||+++... ....++|.+|+.++++++|||||+++|+|...
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~---- 101 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD---- 101 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEEC----
Confidence 45677889999999999999974 356899999997443 33457899999999999999999999997543
Q ss_pred CceEeEEEecccCCCHHHHHhccCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCee
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQ----------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVL 848 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NIL 848 (914)
+..++|||||++|+|.+++...... .....+++.++++|+.|||.||+|||++ +||||||||+|||
T Consensus 102 -~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NIL 177 (308)
T 4gt4_A 102 -QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVL 177 (308)
T ss_dssp -SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred -CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceE
Confidence 3679999999999999999754311 1235689999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 849 LDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 849 l~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++++++||+|||+|+........ ......+||+.|||||++. +.++|||||||+++|||
T Consensus 178 l~~~~~~Ki~DFGlar~~~~~~~~------~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~ 241 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYAADYY------KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 241 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGGGGCB------CSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ECCCCCEEECCcccceeccCCCce------eEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHH
Confidence 999999999999999876443211 1122457999999999994 59999999999999975
No 43
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.8e-42 Score=366.50 Aligned_cols=188 Identities=24% Similarity=0.308 Sum_probs=155.7
Q ss_pred hcccccCcccCCccEEEEEEEEC---CCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILG---DDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
++|++.+.||+|+||+||+|++. .+++.||||+++... .....++.+|++++++++|||||++++++.. .
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-----~ 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT-----E 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE-----T
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-----C
Confidence 58999999999999999999984 467899999997432 2234578899999999999999999999543 4
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
+..|+|||||+||+|.+++.+. ..+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|
T Consensus 99 ~~~~ivmEy~~gg~L~~~l~~~------~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~D 169 (304)
T 3ubd_A 99 GKLYLILDFLRGGDLFTRLSKE------VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTD 169 (304)
T ss_dssp TEEEEEECCCTTCEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEES
T ss_pred CEEEEEEEcCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecc
Confidence 5899999999999999999865 4689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+|+...+.. ......+||+.|||||++. +.++||||+||++|||.
T Consensus 170 FGla~~~~~~~--------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyeml 220 (304)
T 3ubd_A 170 FGLSKESIDHE--------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 220 (304)
T ss_dssp SEEEEC-------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHH
T ss_pred cccceeccCCC--------ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHH
Confidence 99998654321 1123468999999999994 58999999999999983
No 44
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.8e-40 Score=378.53 Aligned_cols=364 Identities=20% Similarity=0.203 Sum_probs=222.8
Q ss_pred CCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCcc
Q 042766 137 FSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTT 216 (914)
Q Consensus 137 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 216 (914)
..+..+..++++++|++|++++|.+++ +| .++.+++|++|+|++|++++. | ++.+++|++|++++|.+++. |
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--
T ss_pred cCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--
Confidence 333444455666666666666666664 24 456666666666666666642 3 55666666666666666543 2
Q ss_pred chhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCcccccccc
Q 042766 217 LGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNL 296 (914)
Q Consensus 217 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 296 (914)
++.+++|++|++++|++++. | +..+++|++|++++|++++. + +.++++|++|++++|+..+.+ .+..+++|
T Consensus 102 ~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~---l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L 172 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D---VSHNTQLTELDCHLNKKITKL--DVTPQTQL 172 (457)
T ss_dssp CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C---CTTCTTCCEEECTTCSCCCCC--CCTTCTTC
T ss_pred cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c---cccCCcCCEEECCCCCccccc--ccccCCcC
Confidence 55566666666666666542 2 55555555555555555543 2 234555555555555433333 24455555
Q ss_pred ccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccE
Q 042766 297 ELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMI 376 (914)
Q Consensus 297 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~ 376 (914)
++|++++|++++.. +..+++|+.|++++|++++. .++.+++|++|++++|
T Consensus 173 ~~L~ls~n~l~~l~---l~~l~~L~~L~l~~N~l~~~---------~l~~l~~L~~L~Ls~N------------------ 222 (457)
T 3bz5_A 173 TTLDCSFNKITELD---VSQNKLLNRLNCDTNNITKL---------DLNQNIQLTFLDCSSN------------------ 222 (457)
T ss_dssp CEEECCSSCCCCCC---CTTCTTCCEEECCSSCCSCC---------CCTTCTTCSEEECCSS------------------
T ss_pred CEEECCCCccceec---cccCCCCCEEECcCCcCCee---------ccccCCCCCEEECcCC------------------
Confidence 55555555555421 44455555555555555443 0233444444444444
Q ss_pred EEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCc
Q 042766 377 ELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNS 456 (914)
Q Consensus 377 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 456 (914)
++++ +| +..+++|++|++++|++++.. +..+++|+.|++++| +|+.|++++|.
T Consensus 223 -------~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~ 275 (457)
T 3bz5_A 223 -------KLTE-ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNT 275 (457)
T ss_dssp -------CCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCT
T ss_pred -------cccc-cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------CCCEEECCCCc
Confidence 4443 23 455666666666666666543 334556666666554 34566777777
Q ss_pred CCCCCCCccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCc
Q 042766 457 LQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPV 536 (914)
Q Consensus 457 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 536 (914)
+.+.+| ++.+++|+.|++++|.+.+.+|.... .+ +.|+++ ++++|++|+|++|+|++. +
T Consensus 276 ~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~---~L-~~L~l~-------------~~~~L~~L~L~~N~l~~l-~- 334 (457)
T 3bz5_A 276 QLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAA---GI-TELDLS-------------QNPKLVYLYLNNTELTEL-D- 334 (457)
T ss_dssp TCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTC---CC-SCCCCT-------------TCTTCCEEECTTCCCSCC-C-
T ss_pred cCCccc--ccccccCCEEECCCCcccceeccCCC---cc-eEechh-------------hcccCCEEECCCCccccc-c-
Confidence 666665 45677777777777777766664322 22 334444 346899999999999985 3
Q ss_pred cccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCC
Q 042766 537 TLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVK 609 (914)
Q Consensus 537 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 609 (914)
++.+++|+.|++++|++++ ++.|+.|++++|+++|. ..+..|+.+++++|+++|.+|..
T Consensus 335 -l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 335 -VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp -CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred -cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 8899999999999999986 24667778999999986 34566888999999999999965
No 45
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.2e-40 Score=380.99 Aligned_cols=348 Identities=22% Similarity=0.236 Sum_probs=271.8
Q ss_pred ceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccC
Q 042766 248 ELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQ 327 (914)
Q Consensus 248 ~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 327 (914)
+.++.+++.++. +|..+. +++++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~~-ip~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 14 RAVLCHRKRFVA-VPEGIP---TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TEEECCSCCCSS-CCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-CCCCCC---CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 578888888874 565443 5889999999999988888999999999999999999988888999999999999999
Q ss_pred CcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccC
Q 042766 328 NNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVN 407 (914)
Q Consensus 328 N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 407 (914)
|.++.++. ..|.++++|++|+|++|++++..|..+..+. +|++|++++|.+++..+..|.++++|++|+|++|
T Consensus 90 n~l~~~~~------~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 162 (477)
T 2id5_A 90 NRLKLIPL------GVFTGLSNLTKLDISENKIVILLDYMFQDLY-NLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC 162 (477)
T ss_dssp SCCCSCCT------TSSTTCTTCCEEECTTSCCCEECTTTTTTCT-TCCEEEECCTTCCEECTTSSTTCTTCCEEEEESC
T ss_pred CcCCccCc------ccccCCCCCCEEECCCCccccCChhHccccc-cCCEEECCCCccceeChhhccCCCCCCEEECCCC
Confidence 99887643 3467788888888888888766666665554 5666777777666666666666666666666666
Q ss_pred cccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCch
Q 042766 408 QFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQ 487 (914)
Q Consensus 408 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 487 (914)
++++..+..|..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.+|.......+|
T Consensus 163 ~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L---------------- 226 (477)
T 2id5_A 163 NLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNL---------------- 226 (477)
T ss_dssp CCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCC----------------
T ss_pred cCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccc----------------
Confidence 6666555566666666666666666666555566666666666666666555554443333333
Q ss_pred hhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCC
Q 042766 488 QLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKS 567 (914)
Q Consensus 488 ~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 567 (914)
+.|++++|++++..+..|.++++|+.|+|++|++++..+..|..+++|++|+|++|++++..|.+|..+++
T Consensus 227 ---------~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 297 (477)
T 2id5_A 227 ---------TSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 297 (477)
T ss_dssp ---------SEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTT
T ss_pred ---------cEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCccc
Confidence 45666666666444467888999999999999999998999999999999999999999999999999999
Q ss_pred CCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCCCcCCCCCccCccCCCCCCCCcc
Q 042766 568 IKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVKGVFSNKTKISLHGNVKLCGGID 631 (914)
Q Consensus 568 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~ 631 (914)
|+.|+|++|+|++..+..|..+++|+.|+|++|+|.|.++..+.+.......+.++...|..+.
T Consensus 298 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 298 LRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp CCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred CCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 9999999999998888889999999999999999999998777666555567778888887643
No 46
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=3.8e-39 Score=372.10 Aligned_cols=343 Identities=28% Similarity=0.398 Sum_probs=227.2
Q ss_pred ceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccC
Q 042766 78 RLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCAS 157 (914)
Q Consensus 78 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 157 (914)
+++.|++.++++.. +| .+..+++|++|+|++|.+++. |. ++++++|++|+|++|++++..| ++++++|++|+++
T Consensus 47 ~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~ 120 (466)
T 1o6v_A 47 QVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLF 120 (466)
T ss_dssp TCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred cccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCEEECC
Confidence 57778888877754 43 477788888888888888754 33 7888888888888888875444 7888888888888
Q ss_pred CCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCC
Q 042766 158 NNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMF 237 (914)
Q Consensus 158 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 237 (914)
+|++++. |. +..+++|++|++++|.+++ +| .++.+++|++|+++ |.+.+..+ ++++++|++|++++|++++.
T Consensus 121 ~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~~~- 192 (466)
T 1o6v_A 121 NNQITDI-DP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSDI- 192 (466)
T ss_dssp SSCCCCC-GG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCCCC-
T ss_pred CCCCCCC-hH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCCCC-
Confidence 8888754 33 7778888888888888774 33 37777888888875 44543322 77777777777777777653
Q ss_pred CCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCcccccccccc
Q 042766 238 PRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSL 317 (914)
Q Consensus 238 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 317 (914)
..+..+++|++|++++|.+++..| +..+++|++|++++|++++. ..+..+++|++|++++|++++..+ +..+
T Consensus 193 -~~l~~l~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l 264 (466)
T 1o6v_A 193 -SVLAKLTNLESLIATNNQISDITP---LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGL 264 (466)
T ss_dssp -GGGGGCTTCSEEECCSSCCCCCGG---GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred -hhhccCCCCCEEEecCCccccccc---ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcC
Confidence 246677777777777777776544 34567777777777777643 346666777777777777766554 6666
Q ss_pred ccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCC
Q 042766 318 KNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLV 397 (914)
Q Consensus 318 ~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~ 397 (914)
++|++|++++|.+++. .+ +..+++|+.|+|++|++++. .+ +..++
T Consensus 265 ~~L~~L~l~~n~l~~~------~~--~~~l~~L~~L~L~~n~l~~~-------------------------~~--~~~l~ 309 (466)
T 1o6v_A 265 TKLTELKLGANQISNI------SP--LAGLTALTNLELNENQLEDI-------------------------SP--ISNLK 309 (466)
T ss_dssp TTCSEEECCSSCCCCC------GG--GTTCTTCSEEECCSSCCSCC-------------------------GG--GGGCT
T ss_pred CCCCEEECCCCccCcc------cc--ccCCCccCeEEcCCCcccCc-------------------------hh--hcCCC
Confidence 6666666666666553 11 45566666666666665532 22 44555
Q ss_pred CCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccC
Q 042766 398 NLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIAS 477 (914)
Q Consensus 398 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 477 (914)
+|+.|+|++|++++..| +..+++|++|++++|.+++. ..+.++++|+.|++++|++++..| +..+++|+.|+++
T Consensus 310 ~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~ 383 (466)
T 1o6v_A 310 NLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN 383 (466)
T ss_dssp TCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECC
T ss_pred CCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEecc
Confidence 66666666666665544 55666666666666666643 345666666666666666665555 5666666666666
Q ss_pred CCccCC
Q 042766 478 YNKLTG 483 (914)
Q Consensus 478 ~N~l~~ 483 (914)
+|.+++
T Consensus 384 ~n~~~~ 389 (466)
T 1o6v_A 384 DQAWTN 389 (466)
T ss_dssp CEEEEC
T ss_pred CCcccC
Confidence 666663
No 47
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.6e-40 Score=358.54 Aligned_cols=195 Identities=26% Similarity=0.322 Sum_probs=154.2
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
.+|.+.+.||+|+||+||+|++ +|+.||||+++.... ....+..|+..+.+++|||||+++++|.... ......++
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEEEE
Confidence 4678889999999999999998 478999999864322 1223344555667889999999999986543 12236799
Q ss_pred EEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH-----CQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~-----~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
|||||++|+|.++++.. .+++.++.+++.|++.||+|||++ +.++||||||||+|||++.++++||+|
T Consensus 79 V~Ey~~~gsL~~~l~~~-------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D 151 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEECCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EecCCCCCcHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence 99999999999999753 589999999999999999999976 246899999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----------hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----------~~~~Di~s~g~~~~~~f 914 (914)
||+|+......... .......+||+.|||||++. +.++|||||||++|||+
T Consensus 152 FGla~~~~~~~~~~----~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~ 212 (303)
T 3hmm_A 152 LGLAVRHDSATDTI----DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212 (303)
T ss_dssp CTTCEEEETTTTEE----SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccccCCCCce----eeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHH
Confidence 99998764322110 11122467999999999983 46899999999999973
No 48
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=8.3e-39 Score=369.25 Aligned_cols=344 Identities=26% Similarity=0.385 Sum_probs=164.0
Q ss_pred ccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeec
Q 042766 173 LKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFL 252 (914)
Q Consensus 173 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 252 (914)
++|+.|++++|.++ .+|. +..+++|++|+|++|.+++..| ++++++|++|++++|++++..| +.++++|++|++
T Consensus 46 ~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 46 DQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp HTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred ccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 33444444444443 2222 3334444444444444443222 4444444444444444443322 444444444444
Q ss_pred cCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCC
Q 042766 253 TENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGT 332 (914)
Q Consensus 253 ~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 332 (914)
++|.+++..+ +.++++|++|++++|.+.+. + .+..+++|++|+++ |.+.+..+ +..+++|++|++++|.++.
T Consensus 120 ~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 120 FNNQITDIDP---LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CSSCCCCCGG---GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCChH---HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCCC
Confidence 4444443211 23444444444444444421 1 24444444444443 23332222 4444444444444444433
Q ss_pred CCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCccccc
Q 042766 333 GTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGT 412 (914)
Q Consensus 333 ~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 412 (914)
. ..+..+++|++|++++|++++..| +..+. +|+.|++++|++++. +.+..+++|++|++++|++++.
T Consensus 192 ~--------~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~-~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~ 258 (466)
T 1o6v_A 192 I--------SVLAKLTNLESLIATNNQISDITP--LGILT-NLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNL 258 (466)
T ss_dssp C--------GGGGGCTTCSEEECCSSCCCCCGG--GGGCT-TCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred C--------hhhccCCCCCEEEecCCccccccc--ccccC-CCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccc
Confidence 2 113444555555555555443322 11111 344444444444332 2345555566666666655544
Q ss_pred CChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCchhhhcc
Q 042766 413 IPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSI 492 (914)
Q Consensus 413 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 492 (914)
.| +..+++|++|++++|.+++..+ +..+++|+.|+|++|++++..| +..+++|+.|++++|+++
T Consensus 259 ~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~---------- 322 (466)
T 1o6v_A 259 AP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNIS---------- 322 (466)
T ss_dssp GG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCS----------
T ss_pred hh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCC----------
Confidence 33 5555556666666665554332 5555556666666665554332 445555555554444444
Q ss_pred cchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEE
Q 042766 493 TTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALN 572 (914)
Q Consensus 493 ~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 572 (914)
+..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++.+| +..+++|+.|+
T Consensus 323 ---------------~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 381 (466)
T 1o6v_A 323 ---------------DISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLG 381 (466)
T ss_dssp ---------------CCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEE
T ss_pred ---------------Cchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEe
Confidence 3333 44556666666666666654 345666666666666666666555 56666666666
Q ss_pred ccCCcccc
Q 042766 573 VSSNNLSG 580 (914)
Q Consensus 573 Ls~N~l~~ 580 (914)
+++|++++
T Consensus 382 l~~n~~~~ 389 (466)
T 1o6v_A 382 LNDQAWTN 389 (466)
T ss_dssp CCCEEEEC
T ss_pred ccCCcccC
Confidence 66666665
No 49
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.2e-40 Score=361.47 Aligned_cols=205 Identities=21% Similarity=0.327 Sum_probs=167.8
Q ss_pred HHHHHHHhhcccccCcccCCccEEEEEEEECC-----CcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCC-CCcceEEe
Q 042766 697 YAELSKATSEFSSSNMIGQGRFGTVYKGILGD-----DEMVVAVKVINLKQK-GASKSFVSECEALRNIRH-RNLIKIIT 769 (914)
Q Consensus 697 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~l~~ 769 (914)
.+++....++|++.+.||+|+||+||+|++.. +++.||||+++.... ...+++.+|++++++++| ||||+++|
T Consensus 56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 34444556789999999999999999999854 347899999974432 345679999999999976 89999999
Q ss_pred EeecCCCCCCceEeEEEecccCCCHHHHHhccCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEe
Q 042766 770 ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQ----------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVH 839 (914)
Q Consensus 770 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivH 839 (914)
+|... ....++|||||++|+|.++++..+.. .....+++.+++.|+.|||.||+|||++ +|||
T Consensus 136 ~~~~~----~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiH 208 (353)
T 4ase_A 136 ACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIH 208 (353)
T ss_dssp EECCT----TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred EEEec----CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---Ceec
Confidence 97543 24679999999999999999764321 1124589999999999999999999999 9999
Q ss_pred cCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 840 GDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 840 rDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||||+|||+++++++||+|||+|+.+...... ......+||+.|||||++. +.++|||||||++||||
T Consensus 209 RDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~------~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~ 281 (353)
T 4ase_A 209 RDLAARNILLSEKNVVKICDFGLARDIYKDPDY------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 281 (353)
T ss_dssp SCCSGGGEEECGGGCEEECCCGGGSCTTTCTTS------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHT
T ss_pred CccCccceeeCCCCCEEECcchhhhhcccCCCc------eeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHH
Confidence 999999999999999999999999876432211 1223467999999999995 59999999999999986
No 50
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=362.32 Aligned_cols=196 Identities=25% Similarity=0.349 Sum_probs=164.5
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecC-CCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSST-DFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~~~~ 781 (914)
++|++.+.||+|+||+||+|+++.+|+.||||+++... ....+.+.+|+++|++++|||||++++++... .+.....
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 47999999999999999999999999999999996443 23346788999999999999999999987543 2445567
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.|+|||||+ |+|.+++... ..+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~------~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFG 203 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS------QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFG 203 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEeCCC-CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecc
Confidence 899999996 6899999765 4699999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+|+.+...... ........+||+.|||||++. +.++||||+||++|||+
T Consensus 204 la~~~~~~~~~----~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell 257 (398)
T 4b99_A 204 MARGLCTSPAE----HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML 257 (398)
T ss_dssp TCBCC-----------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred eeeecccCccc----cccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHH
Confidence 99876432211 111233578999999999974 57899999999999983
No 51
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=361.44 Aligned_cols=349 Identities=19% Similarity=0.177 Sum_probs=299.3
Q ss_pred cccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccC
Q 042766 224 VNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPS 303 (914)
Q Consensus 224 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 303 (914)
+.++.++++++ .+|..+. ++++.|+|++|++++..| ..+.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQ-DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECT-TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECH-hHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 56888999998 5666554 689999999999997654 5567999999999999999998899999999999999999
Q ss_pred ccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecc
Q 042766 304 NQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRN 383 (914)
Q Consensus 304 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N 383 (914)
|+++++.+..|.++++|++|+|++|.++.. .+..+.++++|+.|+|++|++++..|..+..+. +|+.|++++|
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n 162 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISENKIVIL------LDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN-SLEQLTLEKC 162 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTTSCCCEE------CTTTTTTCTTCCEEEECCTTCCEECTTSSTTCT-TCCEEEEESC
T ss_pred CcCCccCcccccCCCCCCEEECCCCccccC------ChhHccccccCCEEECCCCccceeChhhccCCC-CCCEEECCCC
Confidence 999998888999999999999999999876 344678999999999999999988788888776 7999999999
Q ss_pred cccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCC
Q 042766 384 QISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPS 463 (914)
Q Consensus 384 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 463 (914)
++++..+..|.++++|+.|+|++|++.+..+..|..+++|+.|++++|.+.+.+|.......+|+.|+|++|++++..+.
T Consensus 163 ~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 242 (477)
T 2id5_A 163 NLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYL 242 (477)
T ss_dssp CCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHH
T ss_pred cCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHH
Confidence 99988888899999999999999999999999999999999999999998888888877778999999999999965556
Q ss_pred ccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCcccccccc
Q 042766 464 SLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVS 543 (914)
Q Consensus 464 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 543 (914)
.+.++++|+.|++++|+++ +..+..|.++++|+.|+|++|++++..|..|..+++
T Consensus 243 ~~~~l~~L~~L~Ls~n~l~-------------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 297 (477)
T 2id5_A 243 AVRHLVYLRFLNLSYNPIS-------------------------TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 297 (477)
T ss_dssp HHTTCTTCCEEECCSSCCC-------------------------EECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTT
T ss_pred HhcCccccCeeECCCCcCC-------------------------ccChhhccccccCCEEECCCCccceECHHHhcCccc
Confidence 7888888877777776665 344456778889999999999999988999999999
Q ss_pred ccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCC
Q 042766 544 LEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVK 609 (914)
Q Consensus 544 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 609 (914)
|++|+|++|++++..+..|..+++|+.|+|++|.+.+.-+. ..-...+..+++.++...|..|..
T Consensus 298 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~-~~~~~~~~~~~~~~~~~~C~~p~~ 362 (477)
T 2id5_A 298 LRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRL-LWVFRRRWRLNFNRQQPTCATPEF 362 (477)
T ss_dssp CCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGG-HHHHTTTTSSCCTTCCCBEEESGG
T ss_pred CCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccch-HhHHhhhhccccCccCceeCCchH
Confidence 99999999999988888889999999999999999864332 112233455667788888777753
No 52
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-37 Score=350.34 Aligned_cols=349 Identities=16% Similarity=0.150 Sum_probs=204.3
Q ss_pred CCCCCCCCCCCC-ccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecC
Q 042766 55 TSSWNNTMNFCQ-WTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALS 133 (914)
Q Consensus 55 ~~~w~~~~~~c~-w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 133 (914)
+++|..+.+||. |.+..|.....++ ............-..++++++|++++|.++...+..+.++++|++|+|+
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~i-----~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~ 77 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVHI-----DMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLN 77 (390)
T ss_dssp ----CCEECBCC------EEEESCEE-----CSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECT
T ss_pred cCCCCCccceehhhhhhccceeeeee-----ecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECC
Confidence 468987778875 4444442111111 2111112222333456788888888888884444446788888888888
Q ss_pred CCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCC
Q 042766 134 NNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKI 213 (914)
Q Consensus 134 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 213 (914)
+|++++..|..++.+++|++|+|++|++++..|..|+++++|++|+|++|+++...+..|+++++|++|++++|.+++..
T Consensus 78 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~ 157 (390)
T 3o6n_A 78 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE 157 (390)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC
T ss_pred CCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccC
Confidence 88888666678888888888888888888777777788888888888888877444444577777777777777777666
Q ss_pred CccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccc
Q 042766 214 PTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNA 293 (914)
Q Consensus 214 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 293 (914)
|..|+.+++|++|++++|++++. .+..+++|+.|++++|.+++. ...
T Consensus 158 ~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~------------------------------~~~ 204 (390)
T 3o6n_A 158 DDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL------------------------------AIP 204 (390)
T ss_dssp TTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE------------------------------ECC
T ss_pred hhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc------------------------------CCC
Confidence 66666777777777777766643 234445555555555555431 112
Q ss_pred cccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhcccc
Q 042766 294 SNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSL 373 (914)
Q Consensus 294 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 373 (914)
++|+.|++++|+++..... ..++|+.|++++|.++.. .++..+++|++|+|++|++++..|..+..+.
T Consensus 205 ~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~--------~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~- 272 (390)
T 3o6n_A 205 IAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT--------AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQ- 272 (390)
T ss_dssp SSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCC--------GGGGGCTTCSEEECCSSCCCEEESGGGTTCS-
T ss_pred CcceEEECCCCeeeecccc---ccccccEEECCCCCCccc--------HHHcCCCCccEEECCCCcCCCcChhHccccc-
Confidence 3455555555555433221 124555566666655543 1345666666666666666644444444433
Q ss_pred ccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEee
Q 042766 374 KMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLG 453 (914)
Q Consensus 374 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 453 (914)
+|++|++++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|.+++. | +..+++|+.|+++
T Consensus 273 ~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~ 347 (390)
T 3o6n_A 273 RLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLS 347 (390)
T ss_dssp SCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECC
T ss_pred cCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcC
Confidence 34444444444443 2334455566666666666666 3444455666666666666666532 2 4455556666666
Q ss_pred CCcCC
Q 042766 454 SNSLQ 458 (914)
Q Consensus 454 ~N~l~ 458 (914)
+|+++
T Consensus 348 ~N~~~ 352 (390)
T 3o6n_A 348 HNDWD 352 (390)
T ss_dssp SSCEE
T ss_pred CCCcc
Confidence 66554
No 53
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.8e-38 Score=366.00 Aligned_cols=186 Identities=25% Similarity=0.322 Sum_probs=159.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHH---HHHHHhcCCCCcceEEeEeecCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSE---CEALRNIRHRNLIKIITICSSTDFE 777 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E---~~~l~~l~h~niv~l~~~~~~~~~~ 777 (914)
.++|++.++||+|+||+||+|+++.+|+.||||+++... ........+| +.+++.++|||||++++++ +
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f-----~ 262 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----H 262 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEE-----E
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEE-----E
Confidence 468999999999999999999999999999999996432 2223334444 5667778999999999984 4
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEE
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHV 857 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki 857 (914)
..+..|+|||||+||+|.+++.+. ..+++.++..|+.||+.||+|||++ +||||||||+|||++.+|++||
T Consensus 263 ~~~~lylVmEy~~GGdL~~~l~~~------~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL 333 (689)
T 3v5w_A 263 TPDKLSFILDLMNGGDLHYHLSQH------GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRI 333 (689)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEE
T ss_pred ECCEEEEEEecCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEe
Confidence 456899999999999999999865 4689999999999999999999999 9999999999999999999999
Q ss_pred ecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCccccccccc
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~ 913 (914)
+|||+|+.+.... ....+||+.|||||++. +.++|+||+||++|||
T Consensus 334 ~DFGlA~~~~~~~----------~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEm 384 (689)
T 3v5w_A 334 SDLGLACDFSKKK----------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384 (689)
T ss_dssp CCCTTCEECSSCC----------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHH
T ss_pred cccceeeecCCCC----------CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 9999998764321 22468999999999983 4789999999999998
No 54
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.3e-37 Score=366.76 Aligned_cols=348 Identities=16% Similarity=0.155 Sum_probs=202.1
Q ss_pred CCCCCCCCCCCCCCC----ccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCC
Q 042766 52 SGVTSSWNNTMNFCQ----WTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRL 127 (914)
Q Consensus 52 ~~~~~~w~~~~~~c~----w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 127 (914)
...+++|.++.+||. |.++.|+. .++-..... .....-..+++++.|++++|.+++..+..++++++|
T Consensus 6 ~~~l~~~~~~~~C~~~~~~~~c~~~~~------~i~~~~~~~--~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L 77 (597)
T 3oja_B 6 RYNVKPRQPEYKCIDSNLQYDCVFYDV------HIDMQTQDV--YFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQV 77 (597)
T ss_dssp -----CCCSEECCCCC--CCSEEECSC------EECSSCCCC--EESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCC
T ss_pred cccccCCCCCCcCcccCcCceeEecCc------eeccccccc--ccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCC
Confidence 345678998878874 77666641 112111111 112222356788888888888886555567888888
Q ss_pred CeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccC
Q 042766 128 EKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITEN 207 (914)
Q Consensus 128 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 207 (914)
++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|++|
T Consensus 78 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N 157 (597)
T 3oja_B 78 ELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNN 157 (597)
T ss_dssp SEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCC
Confidence 88888888888777778888888888888888888777777788888888888888887555555677777777777777
Q ss_pred CCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCC
Q 042766 208 SLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIP 287 (914)
Q Consensus 208 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p 287 (914)
.+++..|..|+.+++|++|+|++|++++.. +..+++|+.|++++|.+++.
T Consensus 158 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l--------------------------- 207 (597)
T 3oja_B 158 NLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL--------------------------- 207 (597)
T ss_dssp CCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEE---------------------------
T ss_pred cCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccc---------------------------
Confidence 777777777777777777777777776532 34445555555555555432
Q ss_pred CccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCch
Q 042766 288 DSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHS 367 (914)
Q Consensus 288 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 367 (914)
...++|+.|++++|.++...+..+ ++|+.|+|++|.+++. .++..+++|+.|+|++|.+++..|..
T Consensus 208 ---~~~~~L~~L~ls~n~l~~~~~~~~---~~L~~L~L~~n~l~~~--------~~l~~l~~L~~L~Ls~N~l~~~~~~~ 273 (597)
T 3oja_B 208 ---AIPIAVEELDASHNSINVVRGPVN---VELTILKLQHNNLTDT--------AWLLNYPGLVEVDLSYNELEKIMYHP 273 (597)
T ss_dssp ---ECCTTCSEEECCSSCCCEEECSCC---SCCCEEECCSSCCCCC--------GGGGGCTTCSEEECCSSCCCEEESGG
T ss_pred ---cCCchhheeeccCCcccccccccC---CCCCEEECCCCCCCCC--------hhhccCCCCCEEECCCCccCCCCHHH
Confidence 122344455555555443332221 3555566666655542 23556666677766666666444444
Q ss_pred hhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCC
Q 042766 368 IANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKL 447 (914)
Q Consensus 368 ~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 447 (914)
+..+. +|+.|+|++|.+++ +|..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|.+++. | +..+++|
T Consensus 274 ~~~l~-~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L 347 (597)
T 3oja_B 274 FVKMQ-RLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTL 347 (597)
T ss_dssp GTTCS-SCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCC
T ss_pred hcCcc-CCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCC
Confidence 33332 23333333333332 2333344445555555555554 2333444444444444444444422 1 3333444
Q ss_pred CeEEeeCCcC
Q 042766 448 GSLDLGSNSL 457 (914)
Q Consensus 448 ~~L~Ls~N~l 457 (914)
+.|+|++|.+
T Consensus 348 ~~L~l~~N~~ 357 (597)
T 3oja_B 348 KNLTLSHNDW 357 (597)
T ss_dssp SEEECCSSCE
T ss_pred CEEEeeCCCC
Confidence 4444444443
No 55
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.6e-38 Score=346.89 Aligned_cols=193 Identities=22% Similarity=0.296 Sum_probs=157.5
Q ss_pred HhhcccccCcccCCccEEEEEEEEC---CCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILG---DDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 778 (914)
..++|++.+.||+|+||+||+|+++ .+++.||||++... ....++.+|+++++.+ +|||||++++++. .
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~-----~ 91 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFR-----K 91 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEE-----E
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEE-----E
Confidence 4567999999999999999999874 46889999998543 3446788999999998 6999999999854 4
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC-CcEEE
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHV 857 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~-~~~ki 857 (914)
.++.++||||++||+|.+++. .+++.++..++.|++.||+|||++ +||||||||+|||++.+ +.+||
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~~---------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl 159 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDILN---------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYAL 159 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHHT---------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEE
T ss_pred CCEEEEEEeCCCcccHHHHHc---------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEE
Confidence 458999999999999999984 478899999999999999999999 99999999999999877 89999
Q ss_pred ecccccccccccccccc--------------------cCCCCccccccCcccccccchhh-----hhhcccCcccccccc
Q 042766 858 GDFGLAKFLSNHHLDIA--------------------SKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVH 912 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~--------------------~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~ 912 (914)
+|||+|+...+...... ..........+||+.|||||++. +.++||||+||++||
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~e 239 (361)
T 4f9c_A 160 VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLS 239 (361)
T ss_dssp CCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHH
T ss_pred CcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHH
Confidence 99999986543221100 00011223468999999999984 478899999999999
Q ss_pred cC
Q 042766 913 HF 914 (914)
Q Consensus 913 ~f 914 (914)
|+
T Consensus 240 ll 241 (361)
T 4f9c_A 240 LL 241 (361)
T ss_dssp HH
T ss_pred HH
Confidence 73
No 56
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=2e-37 Score=339.75 Aligned_cols=280 Identities=16% Similarity=0.218 Sum_probs=171.9
Q ss_pred CCCHhHHHHHHHHHHhcC-CCCCCCCCC----CCCCCCCCccceeecC--------CCCceEEEecCCCCCccccCCCCC
Q 042766 32 QTNETDRLALLAIKSQLH-DPSGVTSSW----NNTMNFCQWTGVTCGH--------RHQRLTELNLSSQRIGGVLSPYVG 98 (914)
Q Consensus 32 ~~~~~~~~aLl~~k~~~~-~~~~~~~~w----~~~~~~c~w~gv~C~~--------~~~~v~~l~l~~~~l~~~~~~~l~ 98 (914)
.+..+|++||++||+++. |+.+.+.+| ..+.++|.|.||+|+. ...+|+.|+|+++.++ .+|+.++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 346789999999999995 787778899 4567899999999952 2356667777776665 5666666
Q ss_pred CCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccccccccc
Q 042766 99 NLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRL 178 (914)
Q Consensus 99 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 178 (914)
.+++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..++..
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~------ 173 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST------ 173 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE------
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc------
Confidence 6666666666666666 66666666666666666666666 566666666666666666666666666555430
Q ss_pred ccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCccc
Q 042766 179 SVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFS 258 (914)
Q Consensus 179 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 258 (914)
.++..|+++++|++|+|++|.++ .+|..++.+++|++|+|++|++++ +|..+..+++|++|+|++|++.
T Consensus 174 ---------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~ 242 (328)
T 4fcg_A 174 ---------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTAL 242 (328)
T ss_dssp ---------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTC
T ss_pred ---------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcch
Confidence 00011223555555555555555 445555555555555555555553 3334555555555555555555
Q ss_pred CcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCC
Q 042766 259 GIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGT 332 (914)
Q Consensus 259 ~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 332 (914)
+.+|.. +.++++|++|+|++|++.+.+|..+.++++|++|+|++|++.+.+|..+..+++|+.+++..|.+..
T Consensus 243 ~~~p~~-~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 243 RNYPPI-FGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp CBCCCC-TTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC
T ss_pred hhhHHH-hcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHH
Confidence 554432 2355555555555555555566666666666666666666666666666666666666666555443
No 57
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4.9e-37 Score=359.39 Aligned_cols=188 Identities=21% Similarity=0.300 Sum_probs=166.0
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||+||+|+++.+|+.||+|++........+.+.+|+++|++++|||||++++++ +.....+
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~-----~~~~~~~ 230 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF-----EDDNEMV 230 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEE-----ECSSEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECCEEE
Confidence 36899999999999999999999999999999999766655667899999999999999999999995 4455899
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC--CcEEEeccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD--MVAHVGDFG 861 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~--~~~ki~DFG 861 (914)
+|||||+||+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||
T Consensus 231 iv~E~~~gg~L~~~i~~~~-----~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG 302 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADEH-----NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFG 302 (573)
T ss_dssp EEEECCCCCBHHHHHTCTT-----SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCS
T ss_pred EEEeecCCCcHHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeecc
Confidence 9999999999999997543 3688999999999999999999999 99999999999999854 899999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
+|+.+.... .....+||+.|||||++. +.++||||+||++|||
T Consensus 303 ~a~~~~~~~---------~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyem 349 (573)
T 3uto_A 303 LTAHLDPKQ---------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 349 (573)
T ss_dssp SCEECCTTS---------EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHH
T ss_pred ceeEccCCC---------ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 998764321 123468999999999994 5899999999999997
No 58
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=4.3e-36 Score=357.19 Aligned_cols=343 Identities=20% Similarity=0.207 Sum_probs=246.3
Q ss_pred ccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccce
Q 042766 244 ISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLL 323 (914)
Q Consensus 244 l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 323 (914)
+.+++.|++++|.+.. +|..++.++++|++|+|++|.+++..|..|+.+++|++|+|++|.|++.+|..|.++++|++|
T Consensus 50 l~~l~~l~l~~~~l~~-lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GCCCSEEEESSCEESE-ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCCCCC-cCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 5566777777777653 455556667777777777777776666677777777777777777776666666666666666
Q ss_pred eccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEE
Q 042766 324 NLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFT 403 (914)
Q Consensus 324 ~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 403 (914)
+|++|.++.++. ..|+++++|++|+|++|.++ +..|..|+++++|++|+
T Consensus 129 ~L~~n~l~~l~~------~~~~~l~~L~~L~Ls~N~l~-------------------------~~~~~~~~~l~~L~~L~ 177 (597)
T 3oja_B 129 VLERNDLSSLPR------GIFHNTPKLTTLSMSNNNLE-------------------------RIEDDTFQATTSLQNLQ 177 (597)
T ss_dssp ECCSSCCCCCCT------TTTTTCTTCCEEECCSSCCC-------------------------BCCTTTTTTCTTCCEEE
T ss_pred EeeCCCCCCCCH------HHhccCCCCCEEEeeCCcCC-------------------------CCChhhhhcCCcCcEEE
Confidence 666666665422 22345555555555555554 45555666667777777
Q ss_pred cccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCC
Q 042766 404 LEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTG 483 (914)
Q Consensus 404 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 483 (914)
|++|++++.. +..+++|+.|++++|.+++ +....+|+.|++++|.++...+. + .++|+.|++++|.+++
T Consensus 178 L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~ 246 (597)
T 3oja_B 178 LSSNRLTHVD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD 246 (597)
T ss_dssp CTTSCCSBCC---GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC
T ss_pred CcCCCCCCcC---hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC
Confidence 7777776542 4456677777777777664 23345677777777777643322 2 2567777777777775
Q ss_pred CCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchh
Q 042766 484 DLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFR 563 (914)
Q Consensus 484 ~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 563 (914)
+..+..++.+ +.|+|++|.+++..|..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+.
T Consensus 247 --~~~l~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~ 321 (597)
T 3oja_B 247 --TAWLLNYPGL-VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQP 321 (597)
T ss_dssp --CGGGGGCTTC-SEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHH
T ss_pred --ChhhccCCCC-CEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccc
Confidence 3556666666 788888888888889999999999999999999997 4677788999999999999998 5788899
Q ss_pred ccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCCCcCCCCCccCccCCCCCCCCccCCCCCCC
Q 042766 564 FLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVKGVFSNKTKISLHGNVKLCGGIDELHLPSC 638 (914)
Q Consensus 564 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~l~~~~c 638 (914)
.+++|+.|+|++|++++.. +..++.|+.|++++|+|+|.++. ..+..+....+.++...|+.........|
T Consensus 322 ~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~~~~~~~~c 392 (597)
T 3oja_B 322 QFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDYQLEHGLC 392 (597)
T ss_dssp HHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTTCEEETTEE
T ss_pred cCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcchhccCCcc
Confidence 9999999999999998653 66788999999999999998654 34566666778889999987444333334
No 59
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5.1e-36 Score=326.55 Aligned_cols=254 Identities=27% Similarity=0.442 Sum_probs=217.4
Q ss_pred ccEEEEeecccccc--cCCccccCCCCCcEEEccc-CcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeE
Q 042766 374 KMIELSVGRNQISG--TIPPGIRNLVNLITFTLEV-NQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSL 450 (914)
Q Consensus 374 ~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 450 (914)
+++.|++++|.+++ .+|..|.++++|++|+|++ |++.+.+|..|..+++|++|+|++|.+++.+|..|.++++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 46677777777776 6777777777788888874 77777777777778888888888888877777777778888888
Q ss_pred EeeCCcCCCCCCCccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCcc
Q 042766 451 DLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQF 530 (914)
Q Consensus 451 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 530 (914)
+|++|++++.+|..+.++++|+.|++++|+++|.+|..+..+...+++|++++|++++.+|..+..++ |++|+|++|++
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 88888887777777777888888888888887777877777773337888888888888888898887 99999999999
Q ss_pred ccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCCC
Q 042766 531 SGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVKG 610 (914)
Q Consensus 531 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 610 (914)
++.+|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|+|++|+++|.+|..+
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~ 288 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCc
Confidence 999999999999999999999999988776 8899999999999999999999999999999999999999999999988
Q ss_pred cCCCCCccCccCCCCCCCC
Q 042766 611 VFSNKTKISLHGNVKLCGG 629 (914)
Q Consensus 611 ~~~~~~~~~~~~n~~lc~~ 629 (914)
.+..+..+.+.+|+++||.
T Consensus 289 ~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 289 NLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp TGGGSCGGGTCSSSEEEST
T ss_pred cccccChHHhcCCCCccCC
Confidence 8889999999999999997
No 60
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-35 Score=335.12 Aligned_cols=335 Identities=19% Similarity=0.209 Sum_probs=237.5
Q ss_pred cccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccc
Q 042766 243 NISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWL 322 (914)
Q Consensus 243 ~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 322 (914)
.+.+++.|++++|.++. +|...+..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++
T Consensus 43 ~l~~l~~l~l~~~~l~~-l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGCCCSEEEEESCEESE-ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCceEEEecCCchhh-CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 35667777777777663 45555666777777777777777666667777777777777777777666666666666666
Q ss_pred eeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEE
Q 042766 323 LNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITF 402 (914)
Q Consensus 323 L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 402 (914)
|++++|.++.++.. .+.++++|++|++++|+++ +..|..|.++++|++|
T Consensus 122 L~L~~n~l~~l~~~------~~~~l~~L~~L~L~~n~l~-------------------------~~~~~~~~~l~~L~~L 170 (390)
T 3o6n_A 122 LVLERNDLSSLPRG------IFHNTPKLTTLSMSNNNLE-------------------------RIEDDTFQATTSLQNL 170 (390)
T ss_dssp EECCSSCCCCCCTT------TTTTCTTCCEEECCSSCCC-------------------------BCCTTTTSSCTTCCEE
T ss_pred EECCCCccCcCCHH------HhcCCCCCcEEECCCCccC-------------------------ccChhhccCCCCCCEE
Confidence 66666666654222 2345555555555555554 4445556666666666
Q ss_pred EcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccC
Q 042766 403 TLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLT 482 (914)
Q Consensus 403 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 482 (914)
++++|++++.. +..+++|+.|++++|.+++. ...++|+.|++++|.++.. |... .++|+.|++++|+++
T Consensus 171 ~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~~--~~~L~~L~l~~n~l~ 239 (390)
T 3o6n_A 171 QLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLT 239 (390)
T ss_dssp ECCSSCCSBCC---GGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECCC--CSSCCEEECCSSCCC
T ss_pred ECCCCcCCccc---cccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-cccc--cccccEEECCCCCCc
Confidence 66666666442 45566677777777766532 2335677777777777643 3222 356777777777776
Q ss_pred CCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcch
Q 042766 483 GDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSF 562 (914)
Q Consensus 483 ~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 562 (914)
+. ..+..++.+ ++|++++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+
T Consensus 240 ~~--~~l~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~ 314 (390)
T 3o6n_A 240 DT--AWLLNYPGL-VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQ 314 (390)
T ss_dssp CC--GGGGGCTTC-SEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGH
T ss_pred cc--HHHcCCCCc-cEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccc
Confidence 43 355566666 778888888888888899999999999999999996 4667788999999999999998 567778
Q ss_pred hccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCCCcCCCCCccCccCCCCCCCC
Q 042766 563 RFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVKGVFSNKTKISLHGNVKLCGG 629 (914)
Q Consensus 563 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~ 629 (914)
..+++|+.|+|++|+++.. | +..+++|+.|++++|+++|.+.. ..+..+....+.+++..|..
T Consensus 315 ~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 315 PQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp HHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCT
T ss_pred cccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceecc
Confidence 9999999999999999865 3 67788999999999999997653 34555666667778777865
No 61
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.6e-34 Score=320.37 Aligned_cols=305 Identities=24% Similarity=0.335 Sum_probs=162.1
Q ss_pred CCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccccccccc
Q 042766 99 NLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRL 178 (914)
Q Consensus 99 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 178 (914)
.+++|++|++++|.++ .+| .+..+++|++|+|++|++++ +|. +..+++|++|++++|++++ + +.+..+++|++|
T Consensus 42 ~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L 115 (347)
T 4fmz_A 42 ELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLREL 115 (347)
T ss_dssp HHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEE
T ss_pred hcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEE
Confidence 4556666666666666 344 36666677777777776663 333 6666666666666666653 3 246666666666
Q ss_pred ccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCccc
Q 042766 179 SVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFS 258 (914)
Q Consensus 179 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 258 (914)
++++|.+++. |. +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.++
T Consensus 116 ~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~ 190 (347)
T 4fmz_A 116 YLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIE 190 (347)
T ss_dssp ECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCC
T ss_pred ECcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccc
Confidence 6666666632 32 5566666666666664443332 25556666666666666554332 555555555555555555
Q ss_pred CcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCc
Q 042766 259 GIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDL 338 (914)
Q Consensus 259 ~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 338 (914)
+..+ +..+++|++|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|++|++++|.++..
T Consensus 191 ~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~----- 258 (347)
T 4fmz_A 191 DISP---LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI----- 258 (347)
T ss_dssp CCGG---GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-----
T ss_pred cccc---ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-----
Confidence 4322 3345555555555555553322 4555555555555555554333 44444444444444444432
Q ss_pred chhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhh
Q 042766 339 DFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVIS 418 (914)
Q Consensus 339 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 418 (914)
..+..+++|++|++++|+++ +. +.+..+++|++|++++|++++..|..+.
T Consensus 259 ---~~~~~l~~L~~L~l~~n~l~-------------------------~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 308 (347)
T 4fmz_A 259 ---NAVKDLTKLKMLNVGSNQIS-------------------------DI--SVLNNLSQLNSLFLNNNQLGNEDMEVIG 308 (347)
T ss_dssp ---GGGTTCTTCCEEECCSSCCC-------------------------CC--GGGGGCTTCSEEECCSSCCCGGGHHHHH
T ss_pred ---hhHhcCCCcCEEEccCCccC-------------------------CC--hhhcCCCCCCEEECcCCcCCCcChhHhh
Confidence 11333444444444444433 11 2244455555555555555555555555
Q ss_pred cccCCceeeecccccccccCccccCCCCCCeEEeeCCcCC
Q 042766 419 ELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQ 458 (914)
Q Consensus 419 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 458 (914)
.+++|++|++++|.+++..| +..+++|++|++++|.|+
T Consensus 309 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 309 GLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp TCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 55555555555555554433 455555555555555543
No 62
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=7.5e-34 Score=314.87 Aligned_cols=308 Identities=25% Similarity=0.366 Sum_probs=207.8
Q ss_pred ccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCcccccccccccc
Q 042766 240 SICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKN 319 (914)
Q Consensus 240 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 319 (914)
.+..+++|+.|++++|.+... |. +..+++|++|++++|++++..+ +..+++|++|+|++|++++. ..|..+++
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~~-~~--~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~ 111 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVASI-QG--IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTN 111 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCCC-TT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTT
T ss_pred cchhcccccEEEEeCCccccc-hh--hhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCc
Confidence 345677888888888888753 32 4577888888888888875433 77888888888888888764 25777888
Q ss_pred ccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCC
Q 042766 320 LWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNL 399 (914)
Q Consensus 320 L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 399 (914)
|++|++++|.++..+ . +..+++|+.|++++|.....++. +..+. +|++|++++|.+.+..+ +..+++|
T Consensus 112 L~~L~l~~n~i~~~~-------~-~~~l~~L~~L~l~~n~~~~~~~~-~~~l~-~L~~L~l~~~~~~~~~~--~~~l~~L 179 (347)
T 4fmz_A 112 LRELYLNEDNISDIS-------P-LANLTKMYSLNLGANHNLSDLSP-LSNMT-GLNYLTVTESKVKDVTP--IANLTDL 179 (347)
T ss_dssp CSEEECTTSCCCCCG-------G-GTTCTTCCEEECTTCTTCCCCGG-GTTCT-TCCEEECCSSCCCCCGG--GGGCTTC
T ss_pred CCEEECcCCcccCch-------h-hccCCceeEEECCCCCCcccccc-hhhCC-CCcEEEecCCCcCCchh--hccCCCC
Confidence 888888888776641 1 56777777777777755433332 33333 45555555555554332 4555555
Q ss_pred cEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCC
Q 042766 400 ITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYN 479 (914)
Q Consensus 400 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 479 (914)
++|++++|++.+..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|+
T Consensus 180 ~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~------- 246 (347)
T 4fmz_A 180 YSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLT------- 246 (347)
T ss_dssp SEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCC-------
T ss_pred CEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCC-------
Confidence 555555555553322 4555555555555555553322 4455555555555555553222 44444444
Q ss_pred ccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCC
Q 042766 480 KLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIP 559 (914)
Q Consensus 480 ~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 559 (914)
+|++++|.+++. ..+..+++|++|++++|++++. ..+..+++|+.|+|++|++++..|
T Consensus 247 ------------------~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~ 304 (347)
T 4fmz_A 247 ------------------WLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDM 304 (347)
T ss_dssp ------------------EEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGH
T ss_pred ------------------EEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcCh
Confidence 455555555432 3567788999999999999875 468899999999999999999999
Q ss_pred cchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccc
Q 042766 560 LSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFE 603 (914)
Q Consensus 560 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 603 (914)
..|..+++|+.|++++|++++..| +..+++|++|++++|+++
T Consensus 305 ~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 305 EVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999999999999999998766 888999999999999875
No 63
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.4e-34 Score=315.36 Aligned_cols=293 Identities=22% Similarity=0.255 Sum_probs=173.9
Q ss_pred CCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccccccccccccc
Q 042766 103 LRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDI 182 (914)
Q Consensus 103 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 182 (914)
++.+++++++++ .+|..+. ++|++|+|++|++++..|..++++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 344444444444 3444332 3455555555555544444455555555555555555544455555555555555555
Q ss_pred ccccCcCCcccccccccceeecccCCCCCCCCccchhhhccccccccccccc--CCCCCccccccccceeeccCCcccCc
Q 042766 183 NYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFS--GMFPRSICNISSVELIFLTENRFSGI 260 (914)
Q Consensus 183 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~ 260 (914)
|+++ .+|..+. ++|++|++++|.+++..+..|+.+++|++|++++|+++ +..|..+..+ +|++|++++|++++
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~- 186 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG- 186 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-
Confidence 5555 3443333 45555555555555444445555666666666666654 3455556655 66666666666664
Q ss_pred ccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcch
Q 042766 261 FPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDF 340 (914)
Q Consensus 261 ~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 340 (914)
+|..++ ++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|++|++++|+++.+
T Consensus 187 l~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l------- 256 (332)
T 2ft3_A 187 IPKDLP---ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRV------- 256 (332)
T ss_dssp CCSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBC-------
T ss_pred cCcccc---CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeec-------
Confidence 343332 5777778888887777777788888888888888888877777777777888888887777643
Q ss_pred hhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCccc--ccCChhhh
Q 042766 341 VIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFH--GTIPDVIS 418 (914)
Q Consensus 341 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~ 418 (914)
|..+..+++|++|++++|++++..+..+..... -....+|+.|++++|.+. +..|..|.
T Consensus 257 p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~-------------------~~~~~~l~~L~l~~N~~~~~~~~~~~~~ 317 (332)
T 2ft3_A 257 PAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGF-------------------GVKRAYYNGISLFNNPVPYWEVQPATFR 317 (332)
T ss_dssp CTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSC-------------------CSSSCCBSEEECCSSSSCGGGSCGGGGT
T ss_pred ChhhhcCccCCEEECCCCCCCccChhHcccccc-------------------ccccccccceEeecCcccccccCccccc
Confidence 334667777777777777777443333332210 011345777777777776 56667777
Q ss_pred cccCCceeeecccc
Q 042766 419 ELKNLQQLSVFNNF 432 (914)
Q Consensus 419 ~l~~L~~L~L~~N~ 432 (914)
.+++|+.+++++|+
T Consensus 318 ~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 318 CVTDRLAIQFGNYK 331 (332)
T ss_dssp TBCCSTTEEC----
T ss_pred ccchhhhhhccccc
Confidence 77888888877764
No 64
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.3e-33 Score=310.62 Aligned_cols=288 Identities=21% Similarity=0.276 Sum_probs=181.1
Q ss_pred CCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecc
Q 042766 126 RLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRIT 205 (914)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 205 (914)
+++.+++++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 6899999999988 7887764 688889999998887777788888888888888888887778888888888888888
Q ss_pred cCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccC-cccccccccCcccceeeccCccCCC
Q 042766 206 ENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSG-IFPFDILLNLPNLKKLGIGGNNFVG 284 (914)
Q Consensus 206 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~ 284 (914)
+|.++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++. ..+...+..+ +|++|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 88888 4555544 678888888888876666667777777777777777752 1222333344 66666666666664
Q ss_pred CCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCc
Q 042766 285 SIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGEL 364 (914)
Q Consensus 285 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 364 (914)
+|..+. ++|++|+|++|++++..+..|..+++|++|++++|.++... +..+..+++|++|+|++|+++
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~------~~~~~~l~~L~~L~L~~N~l~--- 254 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIE------NGSLSFLPTLRELHLDNNKLS--- 254 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCC------TTGGGGCTTCCEEECCSSCCC---
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCC------hhHhhCCCCCCEEECCCCcCe---
Confidence 444433 56666666666666655555555555555555555555431 112334444444444444433
Q ss_pred CchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcc------cCCceeeecccccc--cc
Q 042766 365 PHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISEL------KNLQQLSVFNNFLR--GG 436 (914)
Q Consensus 365 p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~--~~ 436 (914)
.+|..+..+++|++|++++|++++..+..|... .+|+.|++++|.+. +.
T Consensus 255 -----------------------~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~ 311 (332)
T 2ft3_A 255 -----------------------RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEV 311 (332)
T ss_dssp -----------------------BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGS
T ss_pred -----------------------ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccccccc
Confidence 233444455555555555555555444444332 34455555555544 33
Q ss_pred cCccccCCCCCCeEEeeCC
Q 042766 437 IPSGLGNLTKLGSLDLGSN 455 (914)
Q Consensus 437 ~p~~~~~l~~L~~L~Ls~N 455 (914)
.|.+|..+++|+.++|++|
T Consensus 312 ~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 312 QPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp CGGGGTTBCCSTTEEC---
T ss_pred Ccccccccchhhhhhcccc
Confidence 4444445555555555444
No 65
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.4e-34 Score=327.93 Aligned_cols=197 Identities=22% Similarity=0.273 Sum_probs=167.6
Q ss_pred HHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecC
Q 042766 698 AELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSST 774 (914)
Q Consensus 698 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 774 (914)
.++....++|++.++||+|+||+||+|+++.+++.||+|+++.. .....+.+.+|+.+++.++||||+++++++..
T Consensus 67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~- 145 (437)
T 4aw2_A 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD- 145 (437)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC-
T ss_pred hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-
Confidence 34445568999999999999999999999999999999999642 22333458899999999999999999998644
Q ss_pred CCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc
Q 042766 775 DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV 854 (914)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~ 854 (914)
....++||||++||+|.+++.+.. ..+++..+..++.|++.||+|||+. +||||||||+|||++.++.
T Consensus 146 ----~~~~~lV~Ey~~gg~L~~~l~~~~-----~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~ 213 (437)
T 4aw2_A 146 ----DNNLYLVMDYYVGGDLLTLLSKFE-----DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGH 213 (437)
T ss_dssp ----SSEEEEEECCCTTCBHHHHHHTTT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred ----CCEEEEEEecCCCCcHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCC
Confidence 457899999999999999998643 4689999999999999999999999 9999999999999999999
Q ss_pred EEEecccccccccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccccC
Q 042766 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~~f 914 (914)
+||+|||+|+....... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 214 vkL~DFGla~~~~~~~~-------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~ell 275 (437)
T 4aw2_A 214 IRLADFGSCLKLMEDGT-------VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEML 275 (437)
T ss_dssp EEECCCTTCEECCTTSC-------EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHH
T ss_pred EEEcchhhhhhcccCCC-------cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHH
Confidence 99999999986543221 1122357999999999985 46899999999999973
No 66
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.3e-33 Score=308.54 Aligned_cols=291 Identities=19% Similarity=0.193 Sum_probs=170.9
Q ss_pred EecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcc
Q 042766 82 LNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKL 161 (914)
Q Consensus 82 l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 161 (914)
+++++++++ .+|..+. +.|++|+|++|++++..+..|+++++|++|+|++|++++..|..++.+++|++|+|++|++
T Consensus 36 l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 112 (330)
T 1xku_A 36 VQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 112 (330)
T ss_dssp EECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCC
T ss_pred EEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcC
Confidence 344444443 3444432 5677777777777766666777777777777777777766677777777777777777777
Q ss_pred cCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCC--CCCccchhhhcccccccccccccCCCCC
Q 042766 162 EGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGG--KIPTTLGLLRRLVNLNVAENQFSGMFPR 239 (914)
Q Consensus 162 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 239 (914)
+ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++. ..+..+..+++|++|++++|+++
T Consensus 113 ~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~----- 184 (330)
T 1xku_A 113 K-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT----- 184 (330)
T ss_dssp S-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-----
T ss_pred C-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-----
Confidence 6 4555443 566666666666665555556666666666666666542 44444555555555555555544
Q ss_pred ccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCcccccccccccc
Q 042766 240 SICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKN 319 (914)
Q Consensus 240 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 319 (914)
. +|...+ ++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++
T Consensus 185 -------------------~-l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 241 (330)
T 1xku_A 185 -------------------T-IPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPH 241 (330)
T ss_dssp -------------------S-CCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTT
T ss_pred -------------------c-CCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCC
Confidence 2 232221 45666666666666555566666666666666666666665556666666
Q ss_pred ccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCC
Q 042766 320 LWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNL 399 (914)
Q Consensus 320 L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 399 (914)
|++|+|++|.++.+ |..+..+++|++|++++|++++..+..+.... ......+|
T Consensus 242 L~~L~L~~N~l~~l-------p~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~-------------------~~~~~~~l 295 (330)
T 1xku_A 242 LRELHLNNNKLVKV-------PGGLADHKYIQVVYLHNNNISAIGSNDFCPPG-------------------YNTKKASY 295 (330)
T ss_dssp CCEEECCSSCCSSC-------CTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS-------------------CCTTSCCC
T ss_pred CCEEECCCCcCccC-------ChhhccCCCcCEEECCCCcCCccChhhcCCcc-------------------cccccccc
Confidence 66666666666533 33355666666666666666643333332211 00123456
Q ss_pred cEEEcccCcccc--cCChhhhcccCCceeeecccc
Q 042766 400 ITFTLEVNQFHG--TIPDVISELKNLQQLSVFNNF 432 (914)
Q Consensus 400 ~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~ 432 (914)
+.|++++|.+.. ..|..|..+.+++.++|++|+
T Consensus 296 ~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 296 SGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cceEeecCcccccccCccccccccceeEEEecccC
Confidence 666666666642 455666677777777777664
No 67
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=5.1e-34 Score=308.57 Aligned_cols=188 Identities=24% Similarity=0.356 Sum_probs=166.0
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|+..+.||+|+||+||+|++..+++.||||++........+.+.+|+.++++++||||+++++++... +..+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~~ 93 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-----DELW 93 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEEC-----CEEE
Confidence 45799999999999999999999999999999999877666678899999999999999999999996543 4789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++|+|.+++... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|
T Consensus 94 lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 163 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (297)
T ss_dssp EEEECCTTCBHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEECCCCCCHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 999999999999999753 588999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+....... ......||+.|+|||++. +.++||||+||++|||+
T Consensus 164 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 210 (297)
T 3fxz_A 164 AQITPEQS--------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210 (297)
T ss_dssp EECCSTTC--------CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHH
T ss_pred eecCCccc--------ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHH
Confidence 86543221 122457999999999984 58999999999999873
No 68
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4e-34 Score=314.12 Aligned_cols=189 Identities=25% Similarity=0.294 Sum_probs=164.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|++.+.||+|+||+||+|+++.+++.||+|+++.. .....+.+.+|++++++++||||+++++++.. .+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-----~~ 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-----HD 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-----SS
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-----CC
Confidence 46899999999999999999999999999999999743 23455678999999999999999999998543 45
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||++||+|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+||
T Consensus 79 ~~~lv~E~~~gg~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DF 149 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLSRE------RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDF 149 (337)
T ss_dssp EEEEEEECCTTCBHHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEeCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeec
Confidence 889999999999999999754 4688999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+|+...... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 150 G~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 199 (337)
T 1o6l_A 150 GLCKEGISDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199 (337)
T ss_dssp TTCBCSCCTT--------CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHH
T ss_pred cchhhcccCC--------CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHh
Confidence 9998532211 1123468999999999984 58999999999999973
No 69
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.5e-34 Score=325.24 Aligned_cols=195 Identities=19% Similarity=0.260 Sum_probs=166.2
Q ss_pred HHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecC
Q 042766 698 AELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSST 774 (914)
Q Consensus 698 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 774 (914)
.++....++|++.+.||+|+||+||+|+++.+++.||+|+++.. .....+.+.+|+++++.++||||+++++++..
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~- 140 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD- 140 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE-
Confidence 34445567899999999999999999999999999999999642 23344568899999999999999999999643
Q ss_pred CCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc
Q 042766 775 DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV 854 (914)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~ 854 (914)
....++||||++||+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+|||++.+|+
T Consensus 141 ----~~~~~lV~E~~~gg~L~~~l~~~-------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ 206 (410)
T 3v8s_A 141 ----DRYLYMVMEYMPGGDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGH 206 (410)
T ss_dssp ----SSEEEEEECCCTTEEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred ----CCEEEEEEeCCCCCcHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCC
Confidence 45899999999999999998753 588999999999999999999999 9999999999999999999
Q ss_pred EEEecccccccccccccccccCCCCccccccCcccccccchhh--------hhhcccCcccccccccC
Q 042766 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF--------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~--------~~~~Di~s~g~~~~~~f 914 (914)
+||+|||+|+....... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 207 ikL~DFG~a~~~~~~~~-------~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell 267 (410)
T 3v8s_A 207 LKLADFGTCMKMNKEGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267 (410)
T ss_dssp EEECCCTTCEECCTTSE-------EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHH
T ss_pred EEEeccceeEeeccCCc-------ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHH
Confidence 99999999986543221 1122468999999999984 36899999999999973
No 70
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=325.53 Aligned_cols=198 Identities=23% Similarity=0.286 Sum_probs=168.2
Q ss_pred HHHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeec
Q 042766 697 YAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSS 773 (914)
Q Consensus 697 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 773 (914)
.++.....++|++.+.||+|+||+||+|+++.+++.||||+++... ....+.+.+|+.++.+++||||+++++++..
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444456689999999999999999999999999999999996432 2334568899999999999999999998543
Q ss_pred CCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC
Q 042766 774 TDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM 853 (914)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~ 853 (914)
....++||||++||+|.+++.+.+ ..+++..+..++.||+.||+|||++ +||||||||+|||++.++
T Consensus 133 -----~~~~~lVmE~~~gg~L~~~l~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g 199 (412)
T 2vd5_A 133 -----ENYLYLVMEYYVGGDLLTLLSKFG-----ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCG 199 (412)
T ss_dssp -----SSEEEEEECCCCSCBHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTS
T ss_pred -----CCEEEEEEcCCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCC
Confidence 458999999999999999997643 3689999999999999999999999 999999999999999999
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhh-----------hhhcccCcccccccccC
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----------~~~~Di~s~g~~~~~~f 914 (914)
++||+|||+|+....... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 200 ~vkL~DFGla~~~~~~~~-------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyell 264 (412)
T 2vd5_A 200 HIRLADFGSCLKLRADGT-------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMF 264 (412)
T ss_dssp CEEECCCTTCEECCTTSC-------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHH
T ss_pred CEEEeechhheeccCCCc-------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHH
Confidence 999999999987543211 1122458999999999985 47899999999999973
No 71
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.6e-34 Score=312.79 Aligned_cols=189 Identities=23% Similarity=0.327 Sum_probs=164.4
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
..++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-----~~ 87 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-----EK 87 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----CC
Confidence 3468999999999999999999999999999999997543 2345678899999999999999999999643 44
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++|+|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DF 158 (328)
T 3fe3_A 88 TLYLIMEYASGGEVFDYLVAH------GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADF 158 (328)
T ss_dssp EEEEEECCCTTCBHHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECST
T ss_pred EEEEEEECCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeec
Confidence 789999999999999999765 3688999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+|+...... .....+||+.|+|||++. +.++||||+||++|+|+
T Consensus 159 G~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 208 (328)
T 3fe3_A 159 GFSNEFTVGG---------KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 208 (328)
T ss_dssp TCCGGGSSSC---------GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHH
T ss_pred cCceecCCCC---------ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHH
Confidence 9998654321 123457999999999995 37899999999999873
No 72
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=317.52 Aligned_cols=190 Identities=23% Similarity=0.296 Sum_probs=160.1
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 778 (914)
..++|++.+.||+|+||+||+|+++.+++.||||+++.. .....+.+.+|.++++.+ +||||+++++++. .
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~-----~ 95 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQ-----T 95 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----C
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEE-----e
Confidence 357899999999999999999999999999999999743 233456788999999988 6999999999954 3
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
....++||||++||+|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.++++||+
T Consensus 96 ~~~~~lv~E~~~gg~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~ 166 (353)
T 3txo_A 96 PDRLFFVMEFVNGGDLMFHIQKS------RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLA 166 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred CCEEEEEEeCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEc
Confidence 45799999999999999999765 4689999999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||+|+...... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 167 DFG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 218 (353)
T 3txo_A 167 DFGMCKEGICNG--------VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEML 218 (353)
T ss_dssp CCTTCBCSCC-----------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHH
T ss_pred cccceeecccCC--------ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHH
Confidence 999998533211 1223468999999999984 58999999999999973
No 73
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.6e-34 Score=308.72 Aligned_cols=198 Identities=22% Similarity=0.373 Sum_probs=166.2
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|...+.||+|+||+||+|++..+++.||+|++...+....+.+.+|++++++++||||+++++++... ...+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~~ 83 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD-----KRLN 83 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-----TEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecC-----CeeE
Confidence 36899999999999999999999999999999998765666678899999999999999999999997543 4789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++|+|.++++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 84 lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 155 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKSMD-----SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLA 155 (310)
T ss_dssp EEEECCTTCBHHHHHHHCC-----TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccc
Confidence 9999999999999998643 4689999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccc------CCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIAS------KTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~------~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........... ..........||+.|+|||++. +.++||||+||++|||+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 216 (310)
T 3s95_A 156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216 (310)
T ss_dssp EECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred eecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHh
Confidence 876543221100 0111122467999999999995 58899999999999873
No 74
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=6.5e-34 Score=318.13 Aligned_cols=189 Identities=21% Similarity=0.275 Sum_probs=162.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 779 (914)
.++|++.+.||+|+||+||+|+++.+++.||+|+++... ....+.+.+|..+++++ +||||+++++++. ..
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~-----~~ 125 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-----TE 125 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEE-----CS
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEE-----EC
Confidence 468999999999999999999999999999999997542 33345688999999887 8999999999854 34
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||++||+|.+++.+. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 126 ~~~~lV~E~~~gg~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~D 196 (396)
T 4dc2_A 126 SRLFFVIEYVNGGDLMFHMQRQ------RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTD 196 (396)
T ss_dssp SEEEEEEECCTTCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred CEEEEEEEcCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEee
Confidence 5899999999999999999764 4689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+|+...... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 197 FGla~~~~~~~--------~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell 247 (396)
T 4dc2_A 197 YGMCKEGLRPG--------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 247 (396)
T ss_dssp CTTCBCCCCTT--------CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred cceeeecccCC--------CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHH
Confidence 99998532211 1223468999999999995 58999999999999973
No 75
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=6.7e-33 Score=304.86 Aligned_cols=289 Identities=21% Similarity=0.298 Sum_probs=163.7
Q ss_pred CCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccc
Q 042766 102 FLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVD 181 (914)
Q Consensus 102 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 181 (914)
+++.++++++.++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 5778888888877 5666554 577788888888776555567777777777777777776666667777777777777
Q ss_pred cccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccC-c
Q 042766 182 INYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSG-I 260 (914)
Q Consensus 182 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~ 260 (914)
+|+++ .+|..+. ++|++|++++|.++ +..+..|.++++|++|++++|.++. .
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~------------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~ 161 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEIT------------------------KVRKSVFNGLNQMIVVELGTNPLKSSG 161 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCC------------------------BBCHHHHTTCTTCCEEECCSSCCCGGG
T ss_pred CCcCC-ccChhhc--ccccEEECCCCccc------------------------ccCHhHhcCCccccEEECCCCcCCccC
Confidence 77666 4444332 34444444444444 4334444444455555555554432 0
Q ss_pred ccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcch
Q 042766 261 FPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDF 340 (914)
Q Consensus 261 ~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 340 (914)
.....+.++++|++|++++|+++. +|..+. ++|++|+|++|++++..+..|..+++|++|++++|.+++..
T Consensus 162 ~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~------ 232 (330)
T 1xku_A 162 IENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVD------ 232 (330)
T ss_dssp BCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEEC------
T ss_pred cChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeC------
Confidence 122334567778888888888773 455443 67777777777777766666666666666666666655432
Q ss_pred hhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcc
Q 042766 341 VIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISEL 420 (914)
Q Consensus 341 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 420 (914)
+..+..+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+..|...
T Consensus 233 ~~~~~~l~~L~~L~L~~N~l~--------------------------~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~ 286 (330)
T 1xku_A 233 NGSLANTPHLRELHLNNNKLV--------------------------KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPP 286 (330)
T ss_dssp TTTGGGSTTCCEEECCSSCCS--------------------------SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCS
T ss_pred hhhccCCCCCCEEECCCCcCc--------------------------cCChhhccCCCcCEEECCCCcCCccChhhcCCc
Confidence 112344444444444444443 233344445555555555555554444444322
Q ss_pred ------cCCceeeeccccccc--ccCccccCCCCCCeEEeeCC
Q 042766 421 ------KNLQQLSVFNNFLRG--GIPSGLGNLTKLGSLDLGSN 455 (914)
Q Consensus 421 ------~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N 455 (914)
+.|+.|++++|.+.. ..|..|..+..++.++|++|
T Consensus 287 ~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 287 GYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp SCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred ccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 344444444444431 22334444444444444444
No 76
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.1e-34 Score=313.54 Aligned_cols=191 Identities=23% Similarity=0.293 Sum_probs=158.1
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
..++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-----~~~ 82 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLET-----ANK 82 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEEC-----SSE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEe-----CCE
Confidence 3468999999999999999999999999999999997543 2334678999999999999999999999643 447
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 83 ~~lv~E~~~gg~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG 153 (347)
T 3zgw_A 83 IFMVLEYCPGGELFDYIISQ------DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFG 153 (347)
T ss_dssp EEEEEECCTTCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEEeCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEecc
Confidence 89999999999999999754 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+|+....... ......+||+.|+|||++. +.++||||+||++|+|+
T Consensus 154 ~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell 204 (347)
T 3zgw_A 154 LCAKPKGNKD-------YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLM 204 (347)
T ss_dssp TCBC---------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHH
T ss_pred CcccccCCCC-------ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHH
Confidence 9976533211 1122457999999999984 46799999999999873
No 77
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=5.6e-37 Score=354.02 Aligned_cols=385 Identities=16% Similarity=0.134 Sum_probs=196.8
Q ss_pred ccceeecccCCCCCCCCc-cchhhhcccccccccccccC----CCCCccccccccceeeccCCcccCcccccccccCc--
Q 042766 198 AIEVIRITENSLGGKIPT-TLGLLRRLVNLNVAENQFSG----MFPRSICNISSVELIFLTENRFSGIFPFDILLNLP-- 270 (914)
Q Consensus 198 ~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~-- 270 (914)
+|++|+|++|+++..... .+..+++|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..++..++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 344444444444322211 14445555555555555442 22344555556666666666655433333333444
Q ss_pred --ccceeeccCccCCC----CCCCccccccccccccccCccCCcccccccc-----ccccccceeccCCcCCCCCCCCcc
Q 042766 271 --NLKKLGIGGNNFVG----SIPDSLSNASNLELLDLPSNQFKGKVSIDFS-----SLKNLWLLNLEQNNLGTGTANDLD 339 (914)
Q Consensus 271 --~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~~~~~~~ 339 (914)
+|++|+|++|+++. .+|..+..+++|++|+|++|++++..+..+. ..++|++|++++|.++..... .
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~--~ 161 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE--P 161 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH--H
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH--H
Confidence 57777777777663 3466677777777777777777654443332 244677777777766543211 1
Q ss_pred hhhcccCCCCCcEEeccccccCCCcCchhhcc----ccccEEEEeeccccccc----CCccccCCCCCcEEEcccCcccc
Q 042766 340 FVIFLSNCSSLKVLSLSDNQFGGELPHSIANL----SLKMIELSVGRNQISGT----IPPGIRNLVNLITFTLEVNQFHG 411 (914)
Q Consensus 340 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~----~~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~ 411 (914)
++..+..+++|++|+|++|.+++..+..+... ..+|++|++++|.+++. ++..+..+++|++|++++|++++
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 34445566777777777777654333333221 11344444444444432 23334444444444444444432
Q ss_pred cCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCC----CCCccCCCCCccccccCCCccCCCCch
Q 042766 412 TIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGN----IPSSLGNCQNLILFIASYNKLTGDLPQ 487 (914)
Q Consensus 412 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~ 487 (914)
.....+. +..+..+++|++|+|++|++++. ++..+.++++|+.|++++|.+++..+.
T Consensus 242 ~~~~~l~-------------------~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 242 VGMAELC-------------------PGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHHHHH-------------------HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHHHHHH-------------------HHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 2111110 11112344444444444444432 333344444444444444444322222
Q ss_pred hhhcc-----cchhhhhcccCCccCCC----ccccccccccceeecccCCccccccCccccc-----cccccEEEeeccc
Q 042766 488 QLLSI-----TTLSLVLDLSNNLLNGS----LPLQVGNLKNLVMLDISSNQFSGVIPVTLST-----CVSLEYLDISINS 553 (914)
Q Consensus 488 ~~~~~-----~~l~~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~ 553 (914)
.+... ..+ +.|++++|.+++. ++..+..+++|++|||++|++++..+..+.. .++|++|+|++|.
T Consensus 303 ~l~~~l~~~~~~L-~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 303 LLCETLLEPGCQL-ESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHHHHHTSTTCCC-CEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHhccCCccc-eeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCC
Confidence 22111 122 3444444444432 3445556677777777777777655554443 5677777777777
Q ss_pred ccc----cCCcchhccCCCCEEEccCCccccccCcccc-----ccCCCCeEeCCCCcccc
Q 042766 554 FYG----VIPLSFRFLKSIKALNVSSNNLSGKIPEFLE-----NLSFLEFLNLSYNYFEG 604 (914)
Q Consensus 554 l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~ls~N~l~~ 604 (914)
+++ .+|..+..+++|++|++++|++++.....+. ....|+.|++.+|.+..
T Consensus 382 i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~ 441 (461)
T 1z7x_W 382 VSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 441 (461)
T ss_dssp CCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred CChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCH
Confidence 775 6677777777777777777777654222221 12346666666666554
No 78
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=8.4e-34 Score=316.17 Aligned_cols=188 Identities=23% Similarity=0.355 Sum_probs=164.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|++++++++||||+++++++.. ..
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-----~~ 88 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD-----EE 88 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----CC
Confidence 36899999999999999999999999999999999643 23455788999999999999999999998643 44
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||++||+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.+|.+||+||
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DF 159 (384)
T 4fr4_A 89 DMFMVVDLLLGGDLRYHLQQN------VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDF 159 (384)
T ss_dssp EEEEEECCCTTEEHHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEEecCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEecc
Confidence 789999999999999999864 4689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-------hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~f 914 (914)
|+|+...... .....+||+.|||||++. +.++|+||+||++|||+
T Consensus 160 G~a~~~~~~~---------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~ell 211 (384)
T 4fr4_A 160 NIAAMLPRET---------QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELL 211 (384)
T ss_dssp TTCEECCTTC---------CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHH
T ss_pred ceeeeccCCC---------ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHH
Confidence 9998654321 123467999999999983 57899999999999873
No 79
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=9.4e-34 Score=312.02 Aligned_cols=192 Identities=22% Similarity=0.319 Sum_probs=163.8
Q ss_pred HHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCC
Q 042766 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNI-RHRNLIKIITICSSTDF 776 (914)
Q Consensus 701 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 776 (914)
....++|++.+.||+|+||.||+|+++.+++.||||+++... ....+.+.+|.++++.+ +||||+++++++..
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~--- 89 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT--- 89 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC---
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe---
Confidence 345678999999999999999999999999999999997432 34456788999999887 89999999998543
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEE
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAH 856 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 856 (914)
....++||||++||+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.+|.+|
T Consensus 90 --~~~~~lv~E~~~gg~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vk 158 (345)
T 1xjd_A 90 --KENLFFVMEYLNGGDLMYHIQSC------HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIK 158 (345)
T ss_dssp --SSEEEEEEECCTTCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEE
T ss_pred --CCEEEEEEeCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEE
Confidence 45799999999999999999764 3689999999999999999999999 999999999999999999999
Q ss_pred EecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 857 VGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 857 i~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+|||+|+...... ......+||+.|+|||++. +.++|+||+||++|||+
T Consensus 159 L~DFG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 212 (345)
T 1xjd_A 159 IADFGMCKENMLGD--------AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 212 (345)
T ss_dssp ECCCTTCBCCCCTT--------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred EeEChhhhhcccCC--------CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHh
Confidence 99999998543211 1123468999999999984 58899999999999873
No 80
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1e-33 Score=308.60 Aligned_cols=186 Identities=25% Similarity=0.334 Sum_probs=163.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|++.+.||+|+||+||+|+++.+++.||+|+++.. .....+.+.+|+.+++.++||||+++++++.. ..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-----~~ 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD-----AQ 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-----SS
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe-----CC
Confidence 46899999999999999999999999999999999743 23445678899999999999999999998543 45
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||++||+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.+|.+||+||
T Consensus 80 ~~~lv~e~~~gg~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Df 150 (318)
T 1fot_A 80 QIFMIMDYIEGGELFSLLRKS------QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDF 150 (318)
T ss_dssp EEEEEECCCCSCBHHHHHHHT------SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEeCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeec
Confidence 789999999999999999764 3688999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+|+..... ....+||+.|+|||++. +.++|+||+||++|||+
T Consensus 151 g~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 197 (318)
T 1fot_A 151 GFAKYVPDV-----------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML 197 (318)
T ss_dssp SSCEECSSC-----------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHH
T ss_pred CcceecCCc-----------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHH
Confidence 999865321 12357999999999985 58899999999999873
No 81
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=2.5e-37 Score=357.02 Aligned_cols=362 Identities=16% Similarity=0.134 Sum_probs=202.5
Q ss_pred ceEEEecCCCCCccccCCC-CCCCCCCCEEEcCCCCCcc----cCCcccCCCCCCCeeecCCCCCCCcCCCCcc-ccC--
Q 042766 78 RLTELNLSSQRIGGVLSPY-VGNLSFLRYINLADNGFRG----DIPQEIGNLFRLEKLALSNNSFSGTIPTNLS-RCS-- 149 (914)
Q Consensus 78 ~v~~l~l~~~~l~~~~~~~-l~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~-- 149 (914)
+++.|||+++.++...... +..+++|++|+|++|++++ .+|..+..+++|++|||++|.+++..+..+. .++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 4556666666554332222 4455556666666665553 2344455555566666655555433222222 122
Q ss_pred --CcchhccCCCcccC----CCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcc
Q 042766 150 --NLIHFCASNNKLEG----QIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRL 223 (914)
Q Consensus 150 --~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 223 (914)
+|++|+|++|+++. .+|..+..+++|++|+|++|.+++..+..+... .+...++|
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~-------------------l~~~~~~L 144 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEG-------------------LLDPQCRL 144 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHH-------------------HTSTTCCC
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHH-------------------HhcCCCcc
Confidence 35555555555542 234444455555555555555443222222110 00012245
Q ss_pred cccccccccccCCC----CCccccccccceeeccCCcccCcccccccc----cCcccceeeccCccCCCC----CCCccc
Q 042766 224 VNLNVAENQFSGMF----PRSICNISSVELIFLTENRFSGIFPFDILL----NLPNLKKLGIGGNNFVGS----IPDSLS 291 (914)
Q Consensus 224 ~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~----~l~~L~~L~Ls~N~l~~~----~p~~~~ 291 (914)
++|+|++|++++.. +..+..+++|++|++++|.+++..+..+.. ..++|++|+|++|++++. ++..+.
T Consensus 145 ~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~ 224 (461)
T 1z7x_W 145 EKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVA 224 (461)
T ss_dssp CEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHH
T ss_pred eEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHH
Confidence 55555555554322 334444555666666666554332222211 244677777777776643 455666
Q ss_pred cccccccccccCccCCccc-----cccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCc
Q 042766 292 NASNLELLDLPSNQFKGKV-----SIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPH 366 (914)
Q Consensus 292 ~l~~L~~L~Ls~N~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 366 (914)
.+++|++|+|++|++++.. +..+..+++|++|++++|.++..... .++..+..+++|++|+|++|.+++..+.
T Consensus 225 ~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~--~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 225 SKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG--DLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHH--HHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred hCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHH--HHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 6777777777777776533 22333567777777777776543111 1344556677888888888877654443
Q ss_pred hhhcc----ccccEEEEeeccccccc----CCccccCCCCCcEEEcccCcccccCChhhhc-----ccCCceeeeccccc
Q 042766 367 SIANL----SLKMIELSVGRNQISGT----IPPGIRNLVNLITFTLEVNQFHGTIPDVISE-----LKNLQQLSVFNNFL 433 (914)
Q Consensus 367 ~~~~~----~~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l 433 (914)
.+... ..+|++|++++|.+++. ++..+..+++|++|+|++|++++..+..+.. .++|++|+|++|.+
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 44332 23577777777777654 4556667778888888888877665555543 56788888888888
Q ss_pred cc----ccCccccCCCCCCeEEeeCCcCCCC
Q 042766 434 RG----GIPSGLGNLTKLGSLDLGSNSLQGN 460 (914)
Q Consensus 434 ~~----~~p~~~~~l~~L~~L~Ls~N~l~~~ 460 (914)
++ .+|..+..+++|++|+|++|++++.
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 75 6677777778888888888887643
No 82
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-33 Score=325.68 Aligned_cols=200 Identities=23% Similarity=0.336 Sum_probs=155.5
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|++.+.||+|+||+||+|++..+++.||||++... +....+++.+|++++++++||||+++++++.....+.....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 6899999999999999999999999999999999643 23345688999999999999999999999876665666789
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
|+||||+ +++|.+++... ..+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 133 ~lv~e~~-~~~L~~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTP------VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp EEEECCC-SEEHHHHHHSS------CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEecc-ccchhhhcccC------CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeeccccc
Confidence 9999998 57999999754 4689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccc-------------------CCCCccccccCcccccccchh-----hhhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIAS-------------------KTPSSSIGIKGTVGYVAPGKF-----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~-------------------~~~~~~~~~~GT~~y~APE~~-----~~~~~Di~s~g~~~~~~f 914 (914)
|+........... .........+||+.|||||++ ++.++||||+||++|||+
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ell 278 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHH
Confidence 9876432211000 000123456899999999986 358999999999999974
No 83
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.3e-33 Score=305.69 Aligned_cols=199 Identities=23% Similarity=0.319 Sum_probs=170.4
Q ss_pred CccCHHHHHHHhhc----------ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCC
Q 042766 693 PMVSYAELSKATSE----------FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHR 762 (914)
Q Consensus 693 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 762 (914)
+.++.+++..++.. |+..+.||+|+||.||+|++..+|+.||||+++.......+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 44666777666643 67778999999999999999989999999999877666678899999999999999
Q ss_pred CcceEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCC
Q 042766 763 NLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDL 842 (914)
Q Consensus 763 niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDl 842 (914)
||+++++++... ...++||||+++++|.+++.. ..+++.++..++.|++.||+|||+. +|+||||
T Consensus 103 niv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~-------~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dl 167 (321)
T 2c30_A 103 NVVEMYKSYLVG-----EELWVLMEFLQGGALTDIVSQ-------VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDI 167 (321)
T ss_dssp TBCCEEEEEEET-----TEEEEEECCCCSCBHHHHHTT-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred CcceEEEEEEEC-----CEEEEEEecCCCCCHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence 999999997543 478999999999999999864 3589999999999999999999999 9999999
Q ss_pred CCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 843 KPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 843 kp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+||+++.++.+||+|||+++....... ......||+.|+|||++. +.++|+||+||+++||+
T Consensus 168 kp~NIll~~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 235 (321)
T 2c30_A 168 KSDSILLTLDGRVKLSDFGFCAQISKDVP--------KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMV 235 (321)
T ss_dssp SGGGEEECTTCCEEECCCTTCEECCSSSC--------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred CHHHEEECCCCcEEEeeeeeeeecccCcc--------ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHH
Confidence 99999999999999999999986543211 122457999999999994 57899999999999873
No 84
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.8e-33 Score=310.39 Aligned_cols=189 Identities=21% Similarity=0.280 Sum_probs=162.9
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 779 (914)
.++|++.+.||+|+||.||+|+++.+++.||+|+++... ....+.+.+|+.+++++ +||||+++++++.. .
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-----~ 82 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-----E 82 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----S
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-----C
Confidence 358999999999999999999999999999999997543 22345688999999988 89999999998543 4
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++++||+|
T Consensus 83 ~~~~lv~e~~~gg~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~D 153 (345)
T 3a8x_A 83 SRLFFVIEYVNGGDLMFHMQRQ------RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTD 153 (345)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred CEEEEEEeCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEe
Confidence 5889999999999999999764 3689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+|+...... ......+||+.|+|||++. +.++|+||+||++|||+
T Consensus 154 FG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 204 (345)
T 3a8x_A 154 YGMCKEGLRPG--------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 204 (345)
T ss_dssp GGGCBCSCCTT--------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred ccccccccCCC--------CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHH
Confidence 99998532211 1223468999999999985 58899999999999873
No 85
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.8e-33 Score=307.05 Aligned_cols=206 Identities=24% Similarity=0.388 Sum_probs=164.9
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC-----
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDF----- 776 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 776 (914)
..++|++.+.||+|+||.||+|+++.+++.||||+++... ....+.+.+|++++++++||||+++++++.....
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 3568999999999999999999999999999999997543 3455789999999999999999999998754321
Q ss_pred -----------------------------------------------CCCceEeEEEecccCCCHHHHHhccCCcccccC
Q 042766 777 -----------------------------------------------EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRK 809 (914)
Q Consensus 777 -----------------------------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~ 809 (914)
....+.++||||+++|+|.+++..... ...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~ 160 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS---LED 160 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS---GGG
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC---ccc
Confidence 112247999999999999999987543 234
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccccccccc----CCCCcccccc
Q 042766 810 LSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIAS----KTPSSSIGIK 885 (914)
Q Consensus 810 ~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~----~~~~~~~~~~ 885 (914)
.++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+........... ..........
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 57778899999999999999999 9999999999999999999999999999876543211100 0011223457
Q ss_pred Ccccccccchhh----hhhcccCcccccccccC
Q 042766 886 GTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 886 GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+.|+|||++. +.++|+||+||+++||+
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 270 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHH
T ss_pred CCcCccChHHhcCCCCcchhhHHHHHHHHHHHH
Confidence 999999999985 58999999999999873
No 86
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.6e-33 Score=310.57 Aligned_cols=188 Identities=25% Similarity=0.320 Sum_probs=163.1
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc------chHHHHHHHHHHHhcCCCCcceEEeEeecCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG------ASKSFVSECEALRNIRHRNLIKIITICSSTDFE 777 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 777 (914)
.++|++.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---- 86 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN---- 86 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe----
Confidence 45799999999999999999999999999999999754321 34688999999999999999999999643
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC----
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM---- 853 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~---- 853 (914)
....++||||++||+|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 87 -~~~~~lv~e~~~gg~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~ 156 (361)
T 2yab_A 87 -RTDVVLILELVSGGELFDFLAQK------ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIP 156 (361)
T ss_dssp -SSEEEEEEECCCSCBHHHHHTTC------SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSC
T ss_pred -CCEEEEEEEcCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCcc
Confidence 45789999999999999999754 4689999999999999999999999 999999999999998877
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.+||+|||+++...... .....+||+.|+|||++. +.++|+||+||++|+|+
T Consensus 157 ~vkl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll 212 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGV---------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 212 (361)
T ss_dssp CEEECCCSSCEECCTTC---------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred CEEEEecCCceEcCCCC---------ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHH
Confidence 79999999998764321 112357999999999984 57899999999999873
No 87
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.7e-33 Score=311.03 Aligned_cols=190 Identities=21% Similarity=0.260 Sum_probs=163.8
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 778 (914)
..++|++.+.||+|+||.||+|+++.+++.||||+++.. .....+.+.+|..+++.+ +||+|+++++++. .
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~-----~ 92 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-----T 92 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEE-----C
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEE-----c
Confidence 457899999999999999999999999999999999743 234556788999999988 7999999999854 3
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
.+..++||||++||+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+|||++.+|.+||+
T Consensus 93 ~~~~~lv~E~~~gg~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~ 163 (353)
T 2i0e_A 93 MDRLYFVMEYVNGGDLMYHIQQV------GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIA 163 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred CCEEEEEEeCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEE
Confidence 45899999999999999999764 3689999999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||+|+...... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 164 DFG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 215 (353)
T 2i0e_A 164 DFGMCKENIWDG--------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 215 (353)
T ss_dssp CCTTCBCCCCTT--------CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHH
T ss_pred eCCcccccccCC--------cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHH
Confidence 999998532211 1223468999999999984 58999999999999973
No 88
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.4e-33 Score=309.84 Aligned_cols=186 Identities=22% Similarity=0.270 Sum_probs=163.6
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|+..+.||+|+||.||+|++..+++.||+|+++.. .....+.+.+|++++++++||||+++++++.. ..
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~ 114 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-----NS 114 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SS
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-----CC
Confidence 36899999999999999999999999999999999643 23445688899999999999999999998543 45
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||++||+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 115 ~~~lv~e~~~gg~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DF 185 (350)
T 1rdq_E 115 NLYMVMEYVAGGEMFSHLRRI------GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDF 185 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEEcCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEccc
Confidence 789999999999999999764 3589999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+|+..... ....+||+.|+|||++. +.++|+||+||++|||+
T Consensus 186 g~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 232 (350)
T 1rdq_E 186 GFAKRVKGR-----------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232 (350)
T ss_dssp TTCEECSSC-----------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred ccceeccCC-----------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHh
Confidence 999865321 12357999999999984 58999999999999873
No 89
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=6.1e-33 Score=303.38 Aligned_cols=188 Identities=19% Similarity=0.275 Sum_probs=163.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++..+++.||+|++... ....+.+.+|+++++.++||||+++++++.. ....+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-----~~~~~ 77 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFES-----MEELV 77 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-----TTEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEec-----CCEEE
Confidence 46899999999999999999999999999999998643 3345678899999999999999999999644 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC--CCcEEEeccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY--DMVAHVGDFG 861 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~--~~~~ki~DFG 861 (914)
+||||+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 78 lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg 149 (321)
T 1tki_A 78 MIFEFISGLDIFERINTSA-----FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp EEECCCCCCBHHHHHTSSS-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred EEEEeCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECC
Confidence 9999999999999997643 4689999999999999999999999 9999999999999987 7899999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++...... ......||+.|+|||++. +.++|+||+||++|+|+
T Consensus 150 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll 197 (321)
T 1tki_A 150 QARQLKPGD---------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLL 197 (321)
T ss_dssp TCEECCTTC---------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHH
T ss_pred CCeECCCCC---------ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHH
Confidence 998764321 122457999999999984 58999999999999873
No 90
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.98 E-value=3.9e-33 Score=301.30 Aligned_cols=189 Identities=27% Similarity=0.396 Sum_probs=158.5
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC---cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|++.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|+.++++++||||+++++++.. .+.
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-----~~~ 85 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE-----DDC 85 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC-----SSE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee-----CCe
Confidence 579999999999999999999999999999999864432 234678999999999999999999999543 457
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++++|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 86 ~~lv~e~~~g~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg 156 (294)
T 4eqm_A 86 YYLVMEYIEGPTLSEYIESH------GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFG 156 (294)
T ss_dssp EEEEEECCCSCBHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCS
T ss_pred EEEEEeCCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCC
Confidence 89999999999999999764 3689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++....... .......||+.|+|||++. +.++|+||+||++|+|+
T Consensus 157 ~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll 206 (294)
T 4eqm_A 157 IAKALSETSL-------TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEML 206 (294)
T ss_dssp SSTTC--------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHH
T ss_pred Cccccccccc-------cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHH
Confidence 9986543221 1122357999999999995 47899999999999873
No 91
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.98 E-value=3.6e-33 Score=305.61 Aligned_cols=191 Identities=23% Similarity=0.325 Sum_probs=161.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.++|++.+.||+|+||+||+|++..+++.||||++..... ...+.+.+|+.++++++||||+++++++.. ....
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-----~~~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-----GNIQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC-----SSEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec-----CCeE
Confidence 3689999999999999999999999999999999975432 334678899999999999999999999654 3478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~ 151 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIEPD------IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGL 151 (323)
T ss_dssp EEEEECCTTEEGGGGSBTT------TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeec
Confidence 9999999999999988654 3689999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
++.+...... ......+||+.|+|||++. +.++||||+||++|+|+
T Consensus 152 a~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll 202 (323)
T 3tki_A 152 ATVFRYNNRE------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202 (323)
T ss_dssp CEECEETTEE------CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHH
T ss_pred cceeccCCcc------cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHH
Confidence 9865432211 1112457999999999984 46899999999999873
No 92
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.98 E-value=6.7e-33 Score=309.27 Aligned_cols=197 Identities=24% Similarity=0.415 Sum_probs=162.7
Q ss_pred hhcccccCcccCCccEEEEEEEEC-------CCcEEEEEEEeeccC-CcchHHHHHHHHHHHhc-CCCCcceEEeEeecC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILG-------DDEMVVAVKVINLKQ-KGASKSFVSECEALRNI-RHRNLIKIITICSST 774 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 774 (914)
.++|++.+.||+|+||.||+|++. .++..||||+++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~- 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS-
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc-
Confidence 368999999999999999999874 356789999997543 23456789999999999 89999999999643
Q ss_pred CCCCCceEeEEEecccCCCHHHHHhccCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCC
Q 042766 775 DFEGVDFKALVFEYMENGSLEDWLHQSNDQ----------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKP 844 (914)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp 844 (914)
.+..++||||+++|+|.+++...+.. .....+++.+++.++.||+.||+|||++ +|+||||||
T Consensus 159 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp 231 (370)
T 2psq_A 159 ----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 231 (370)
T ss_dssp ----SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred ----CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccch
Confidence 34689999999999999999865321 1124588999999999999999999999 999999999
Q ss_pred CCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 845 SNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 845 ~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+|||++.++.+||+|||+|+........ .......||+.|||||++. +.++|||||||++|||+
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ell 299 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 299 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCTT------CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred hhEEECCCCCEEEccccCCcccCcccce------ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999866432211 1122346889999999984 58899999999999874
No 93
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.98 E-value=3.1e-33 Score=311.14 Aligned_cols=189 Identities=30% Similarity=0.387 Sum_probs=153.9
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHH-HHhcCCCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEA-LRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.++|++.+.||+|+||+||+|+++.+++.||||+++... ....+.+.+|..+ ++.++||||+++++++.. .
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~-----~ 111 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-----A 111 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC-----S
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe-----C
Confidence 368999999999999999999999999999999997543 2234556677776 577899999999998543 4
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
+..++||||++||+|.+++.+. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.+|++||+|
T Consensus 112 ~~~~lv~E~~~gg~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~D 182 (373)
T 2r5t_A 112 DKLYFVLDYINGGELFYHLQRE------RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTD 182 (373)
T ss_dssp SEEEEEEECCCSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred CEEEEEEeCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEee
Confidence 5899999999999999999764 3688899999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+|+...... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 183 FG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 233 (373)
T 2r5t_A 183 FGLCKENIEHN--------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233 (373)
T ss_dssp CCBCGGGBCCC--------CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred CccccccccCC--------CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHH
Confidence 99998533211 1223468999999999984 58899999999999973
No 94
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.98 E-value=5.8e-33 Score=316.53 Aligned_cols=201 Identities=22% Similarity=0.305 Sum_probs=164.2
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|++.+.||+|+||.||+|++..+++.||||++... .....+++.+|++++++++||||+++++++....+.....
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 36899999999999999999999999999999999643 2334568899999999999999999999987655545567
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||++ |+|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~------~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP------IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecCC-cCHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCC
Confidence 899999996 5999999764 4689999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccccccc--------------CCCCccccccCcccccccchh-----hhhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIAS--------------KTPSSSIGIKGTVGYVAPGKF-----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~--------------~~~~~~~~~~GT~~y~APE~~-----~~~~~Di~s~g~~~~~~f 914 (914)
+|+........... .........+||+.|+|||++ ++.++||||+||++|||+
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell 246 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHH
Confidence 99876543211000 000122456899999999987 468999999999999873
No 95
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.98 E-value=9.3e-33 Score=314.19 Aligned_cols=190 Identities=22% Similarity=0.283 Sum_probs=162.1
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
...++|++.+.||+|+||+||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++++.. .
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-----~ 82 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-----E 82 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC-----S
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE-----C
Confidence 345789999999999999999999999999999999975432 334678999999999999999999999643 4
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec---CCCcEE
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---YDMVAH 856 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~---~~~~~k 856 (914)
+..++||||++||+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+|||++ .++.+|
T Consensus 83 ~~~~lv~E~~~gg~L~~~i~~~------~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vk 153 (444)
T 3soa_A 83 GHHYLIFDLVTGGELFEDIVAR------EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVK 153 (444)
T ss_dssp SEEEEEECCCBCCBHHHHHHHC------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEE
T ss_pred CEEEEEEEeCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEE
Confidence 5889999999999999998765 4689999999999999999999999 999999999999998 467899
Q ss_pred EecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 857 VGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 857 i~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
|+|||+|+...... ......+||+.|||||++. +.++||||+||++|+|
T Consensus 154 L~DFG~a~~~~~~~--------~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel 206 (444)
T 3soa_A 154 LADFGLAIEVEGEQ--------QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYIL 206 (444)
T ss_dssp ECCCSSCBCCCTTC--------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred EccCceeEEecCCC--------ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHH
Confidence 99999998654321 1122467999999999984 5899999999999987
No 96
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.98 E-value=1.3e-32 Score=301.55 Aligned_cols=188 Identities=23% Similarity=0.313 Sum_probs=162.7
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC------cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK------GASKSFVSECEALRNIRHRNLIKIITICSSTDFE 777 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 777 (914)
.++|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---- 85 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN---- 85 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe----
Confidence 3579999999999999999999999999999999975432 135789999999999999999999999643
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC----
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM---- 853 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~---- 853 (914)
....++||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 86 -~~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~ 155 (326)
T 2y0a_A 86 -KTDVILILELVAGGELFDFLAEK------ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKP 155 (326)
T ss_dssp -SSEEEEEEECCCSCBHHHHHTTS------SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSC
T ss_pred -CCEEEEEEEcCCCCCHHHHHHhc------CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCC
Confidence 34789999999999999999754 4689999999999999999999999 999999999999999887
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.+||+|||+|+...... ......||+.|+|||++. +.++|+||+||++|+|+
T Consensus 156 ~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll 211 (326)
T 2y0a_A 156 RIKIIDFGLAHKIDFGN---------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211 (326)
T ss_dssp CEEECCCTTCEECCTTS---------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCeECCCCC---------ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHH
Confidence 89999999998754221 112357999999999985 47899999999999873
No 97
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.98 E-value=6.4e-33 Score=307.33 Aligned_cols=193 Identities=21% Similarity=0.293 Sum_probs=162.2
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-----CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-----KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
.++|++.+.||+|+||+||+|+++.+++.||||+++... ....+.+.+|++++++++||||+++++++..
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~----- 97 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS----- 97 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----
Confidence 357999999999999999999999999999999996421 2245789999999999999999999999654
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc---E
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV---A 855 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~---~ 855 (914)
.+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +
T Consensus 98 ~~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~v 172 (351)
T 3c0i_A 98 DGMLYMVFEFMDGADLCFEIVKRAD--AGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPV 172 (351)
T ss_dssp TTEEEEEEECCSSCBHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCE
T ss_pred CCEEEEEEeCCCCCCHHHHHHHhcc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcE
Confidence 3478999999999999988764321 123589999999999999999999999 9999999999999987654 9
Q ss_pred EEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 856 HVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 856 ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+|||+++....... .....+||+.|+|||++. +.++||||+||++|+|+
T Consensus 173 kl~Dfg~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll 227 (351)
T 3c0i_A 173 KLGGFGVAIQLGESGL--------VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILL 227 (351)
T ss_dssp EECCCTTCEECCTTSC--------BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred EEecCcceeEecCCCe--------eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHH
Confidence 9999999987643221 112357999999999984 58899999999999873
No 98
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.98 E-value=8.1e-33 Score=302.23 Aligned_cols=194 Identities=24% Similarity=0.422 Sum_probs=150.0
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|++++++++||||+++++++. ..+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIH-----TENKL 78 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEEC-----CTTEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEE-----ECCeE
Confidence 468999999999999999999999999999999997543 334578899999999999999999999954 34578
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||++ |+|.+++...........+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 154 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGL 154 (317)
T ss_dssp EEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSS
T ss_pred EEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcc
Confidence 99999997 59999987543222234689999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
++...... .......||+.|+|||++. +.++||||+||++|||+
T Consensus 155 ~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~ 203 (317)
T 2pmi_A 155 ARAFGIPV--------NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMI 203 (317)
T ss_dssp CEETTSCC--------CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred ceecCCCc--------ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHH
Confidence 98654221 1112357999999999984 47899999999999873
No 99
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.98 E-value=7.9e-33 Score=307.52 Aligned_cols=189 Identities=23% Similarity=0.350 Sum_probs=162.6
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
..++|++.+.||+|+||.||+|+++.+++.||+|++..... ...+.+.+|++++++++||||+++++++.. ..
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-----~~ 101 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-----ES 101 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----CC
Confidence 35689999999999999999999999999999999975432 334678899999999999999999999643 34
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC---CcEEE
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHV 857 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~---~~~ki 857 (914)
..++||||+++|+|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.+ +.+||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl 172 (362)
T 2bdw_A 102 FHYLVFDLVTGGELFEDIVAR------EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKL 172 (362)
T ss_dssp EEEEEECCCCSCBHHHHHTTC------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEE
T ss_pred EEEEEEecCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEE
Confidence 789999999999999998754 3689999999999999999999999 99999999999999865 45999
Q ss_pred ecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+|||+|+...... .....+||+.|+|||++. +.++||||+||++|+|+
T Consensus 173 ~DfG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll 224 (362)
T 2bdw_A 173 ADFGLAIEVNDSE---------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 224 (362)
T ss_dssp CCCTTCBCCTTCC---------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred eecCcceEecCCc---------ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 9999998654321 112357999999999984 57999999999999873
No 100
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.98 E-value=7e-33 Score=321.11 Aligned_cols=190 Identities=23% Similarity=0.349 Sum_probs=164.8
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|+..+.||+|+||.||+|+++.+++.||||++... .......+.+|++++++++||||+++++++.. .+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-----~~ 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-----KD 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-----CC
Confidence 46799999999999999999999999999999999643 23445678899999999999999999998543 45
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||++||+|.+++...+. ..+++..+..++.||+.||+|||++ +||||||||+|||++.+|.+||+||
T Consensus 258 ~l~lVmEy~~gg~L~~~l~~~~~----~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DF 330 (576)
T 2acx_A 258 ALCLVLTLMNGGDLKFHIYHMGQ----AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDL 330 (576)
T ss_dssp EEEEEECCCCSCBHHHHHHSSSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEEcCCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEec
Confidence 89999999999999999976532 4589999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+|+...... .....+||+.|||||++. +.++|+||+||++|||+
T Consensus 331 Gla~~~~~~~---------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLl 379 (576)
T 2acx_A 331 GLAVHVPEGQ---------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI 379 (576)
T ss_dssp TTCEECCTTC---------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHH
T ss_pred ccceecccCc---------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHH
Confidence 9998654321 112357999999999984 58899999999999973
No 101
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.98 E-value=3.5e-33 Score=301.99 Aligned_cols=195 Identities=25% Similarity=0.404 Sum_probs=161.0
Q ss_pred hhcccccCcccCCccEEEEEEE----ECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGI----LGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.++|++.+.||+|+||.||+|+ +..+++.||||++........+.+.+|++++++++||||+++++++...+ .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---R 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH---H
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---C
Confidence 3689999999999999999999 45688999999997665556678999999999999999999999875322 2
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++|+|.+++...+ ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~D 157 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHK-----ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 157 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCG-----GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred CceEEEEEeCCCCCHHHHHHhcc-----cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEcc
Confidence 35789999999999999998653 4589999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++........ ........||+.|+|||++. +.++||||+||+++||+
T Consensus 158 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~ 211 (295)
T 3ugc_A 158 FGLTKVLPQDKEF-----FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211 (295)
T ss_dssp CCSCC------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred CcccccccCCcce-----eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHH
Confidence 9999876432211 11122345888999999985 58999999999999873
No 102
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.98 E-value=6.8e-33 Score=303.80 Aligned_cols=193 Identities=27% Similarity=0.441 Sum_probs=159.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCC---cEEEEEEEeecc-CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDD---EMVVAVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.++|++.+.||+|+||.||+|++..+ +..||||+++.. .....+.+.+|++++++++||||+++++++. ..
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~ 122 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT-----RG 122 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----GG
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----eC
Confidence 35789999999999999999999754 456999999754 2334568999999999999999999999964 34
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 194 (325)
T 3kul_A 123 RLAMIVTEYMENGSLDTFLRTHD-----GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSD 194 (325)
T ss_dssp GCCEEEEECCTTCBHHHHHHTTT-----TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred CccEEEeeCCCCCcHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECC
Confidence 47899999999999999997543 4689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++........ ........||+.|+|||++. +.++||||+||++|||+
T Consensus 195 fg~a~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell 248 (325)
T 3kul_A 195 FGLSRVLEDDPDA-----AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248 (325)
T ss_dssp CSSCEECC----C-----CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred CCcccccccCccc-----eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHH
Confidence 9999876543211 11122345788999999995 48999999999999863
No 103
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.98 E-value=1.5e-32 Score=296.55 Aligned_cols=188 Identities=23% Similarity=0.394 Sum_probs=160.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|++.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.. ....
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-----DKKL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TTEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe-----CCEE
Confidence 57999999999999999999999999999999997543 2334688899999999999999999999654 3478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++ ++.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 77 ~lv~e~~~~-~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~ 147 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFDSCN-----GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp EEEEECCSE-EHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEecCCC-CHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 999999975 6666665432 4689999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+...... .......||+.|+|||++. +.++||||+||++++|+
T Consensus 148 ~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~ 196 (292)
T 3o0g_A 148 ARAFGIPV--------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196 (292)
T ss_dssp CEECCSCC--------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHT
T ss_pred ceecCCcc--------ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHH
Confidence 98654221 1122357999999999984 57899999999999874
No 104
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.98 E-value=7.5e-33 Score=303.63 Aligned_cols=187 Identities=25% Similarity=0.373 Sum_probs=161.8
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|.+.+.||+|+||.||+|++..+++.||||++... .....+.+.+|+++++.++||||+++++++.. ..
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-----~~ 82 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT-----PT 82 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SS
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----CC
Confidence 36899999999999999999999999999999999643 23344688999999999999999999999654 34
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+ +|+|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+||
T Consensus 83 ~~~lv~E~~-~g~l~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DF 152 (336)
T 3h4j_B 83 DIVMVIEYA-GGELFDYIVEK------KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADF 152 (336)
T ss_dssp EEEEEECCC-CEEHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCS
T ss_pred EEEEEEECC-CCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEe
Confidence 789999999 78999988754 4689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+++...... .....+||+.|+|||++. +.++||||+||++|+|+
T Consensus 153 G~s~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll 202 (336)
T 3h4j_B 153 GLSNIMTDGN---------FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVML 202 (336)
T ss_dssp SCTBTTTTSB---------TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHH
T ss_pred ccceeccCCc---------ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHH
Confidence 9998654321 112357999999999984 47899999999999873
No 105
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.97 E-value=1e-32 Score=308.46 Aligned_cols=189 Identities=21% Similarity=0.296 Sum_probs=163.8
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++..+++.||+|++..........+.+|++++++++||||+++++++.. ....+
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-----~~~~~ 124 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-----KYEMV 124 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-----SSEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe-----CCEEE
Confidence 3579999999999999999999999999999999976554455688999999999999999999999643 45789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC--CCcEEEeccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY--DMVAHVGDFG 861 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~--~~~~ki~DFG 861 (914)
+||||+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 125 lv~E~~~gg~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG 196 (387)
T 1kob_A 125 LILEFLSGGELFDRIAAED-----YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFG 196 (387)
T ss_dssp EEEECCCCCBHHHHTTCTT-----CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred EEEEcCCCCcHHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecc
Confidence 9999999999999997543 4689999999999999999999999 9999999999999974 4789999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+|+...... ......||+.|+|||++. +.++||||+||++|||+
T Consensus 197 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 244 (387)
T 1kob_A 197 LATKLNPDE---------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLL 244 (387)
T ss_dssp TCEECCTTS---------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHH
T ss_pred cceecCCCc---------ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHH
Confidence 998754321 112347999999999994 58999999999999873
No 106
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.97 E-value=8.4e-33 Score=299.43 Aligned_cols=190 Identities=24% Similarity=0.364 Sum_probs=157.6
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--------------------------cchHHHHHHHHHHH
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--------------------------GASKSFVSECEALR 757 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 757 (914)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999964321 12356889999999
Q ss_pred hcCCCCcceEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 042766 758 NIRHRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPM 837 (914)
Q Consensus 758 ~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~i 837 (914)
+++||||+++++++... .....++||||+++++|.+++.. ..+++.++..++.|++.||+|||++ +|
T Consensus 92 ~l~h~~iv~~~~~~~~~---~~~~~~lv~e~~~~~~l~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i 158 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDP---NEDHLYMVFELVNQGPVMEVPTL-------KPLSEDQARFYFQDLIKGIEYLHYQ---KI 158 (298)
T ss_dssp TCCCTTBCCEEEEEECS---SSSEEEEEEECCTTCBSCCSSCS-------SCCCHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hCCCCCCCeEEEEEEcC---CCCEEEEEEecCCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---Ce
Confidence 99999999999997542 23578999999999999876432 4689999999999999999999999 99
Q ss_pred EecCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh-------hhhcccCcccccc
Q 042766 838 VHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTN 910 (914)
Q Consensus 838 vHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~ 910 (914)
+||||||+||+++.++.+||+|||+++....... ......||+.|+|||++. +.++|+||+||++
T Consensus 159 vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l 230 (298)
T 2zv2_A 159 IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA--------LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230 (298)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECSSSSC--------EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHH
T ss_pred eccCCCHHHEEECCCCCEEEecCCCccccccccc--------cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHH
Confidence 9999999999999999999999999987543211 112357999999999984 4678999999999
Q ss_pred cccC
Q 042766 911 VHHF 914 (914)
Q Consensus 911 ~~~f 914 (914)
|+|+
T Consensus 231 ~~l~ 234 (298)
T 2zv2_A 231 YCFV 234 (298)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9873
No 107
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.97 E-value=4.6e-33 Score=304.93 Aligned_cols=199 Identities=34% Similarity=0.550 Sum_probs=167.6
Q ss_pred HHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 699 ELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 699 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
++....++|+..+.||+|+||.||+|++. +++.||||++........+.+.+|++++++++||||+++++++. .
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~ 106 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD-----E 106 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECC-----C
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-----C
Confidence 33446679999999999999999999975 68899999987666666788999999999999999999999954 3
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
.+..++||||+++|+|.+++..... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~ 181 (321)
T 2qkw_B 107 RNEMILIYKYMENGNLKRHLYGSDL--PTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKIT 181 (321)
T ss_dssp TTCCEEEEECCTTCBTGGGSSSSCC--CSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEEC
T ss_pred CCeEEEEEEcCCCCcHHHHHhccCC--CccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEe
Confidence 4478999999999999999875432 124689999999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||+++....... ........||+.|+|||++. +.++||||+||++|||+
T Consensus 182 Dfg~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell 235 (321)
T 2qkw_B 182 DFGISKKGTELDQ------THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235 (321)
T ss_dssp CCTTCEECSSSSC------CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHH
T ss_pred ecccccccccccc------cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHH
Confidence 9999986432211 11122356999999999984 58899999999999873
No 108
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.97 E-value=3.1e-32 Score=296.53 Aligned_cols=195 Identities=27% Similarity=0.429 Sum_probs=162.6
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-----CcchHHHHHHHHHHHhcC---CCCcceEEeEeecC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-----KGASKSFVSECEALRNIR---HRNLIKIITICSST 774 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 774 (914)
..++|++.+.||+|+||+||+|++..+++.||||+++... ......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4578999999999999999999999999999999997432 223457788888887775 99999999998765
Q ss_pred CCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc
Q 042766 775 DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV 854 (914)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~ 854 (914)
........++||||++ |+|.+++..... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP----PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT----TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCC
Confidence 5444446899999996 699999986542 3489999999999999999999999 9999999999999999999
Q ss_pred EEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+||+|||+|+...... ......||+.|+|||++. +.++||||+||++|+|+
T Consensus 159 ~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~ 213 (308)
T 3g33_A 159 VKLADFGLARIYSYQM---------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213 (308)
T ss_dssp EEECSCSCTTTSTTCC---------CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTT
T ss_pred EEEeeCccccccCCCc---------ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHH
Confidence 9999999998653221 123457999999999994 58899999999999985
No 109
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.97 E-value=1e-32 Score=302.92 Aligned_cols=207 Identities=34% Similarity=0.598 Sum_probs=173.6
Q ss_pred CccCHHHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEe
Q 042766 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITIC 771 (914)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 771 (914)
..++..++....++|+..+.||+|+||.||+|++. +++.||||++.... ......+.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 45788899999999999999999999999999865 68899999997543 22334789999999999999999999996
Q ss_pred ecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC
Q 042766 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY 851 (914)
Q Consensus 772 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~ 851 (914)
.. ....++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+++.++|+||||||+||+++.
T Consensus 97 ~~-----~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~ 169 (326)
T 3uim_A 97 MT-----PTERLLVYPYMANGSVASCLRERPE--SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE 169 (326)
T ss_dssp CC-----SSCCEEEEECCTTCBHHHHHHCCST--TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECT
T ss_pred ec-----CCceEEEEEeccCCCHHHHHHhccc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECC
Confidence 54 3467899999999999999986542 2245899999999999999999999987778999999999999999
Q ss_pred CCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 852 DMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 852 ~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++.+||+|||+|+....... .......||+.|+|||++. +.++||||+||++|+|+
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 229 (326)
T 3uim_A 170 EFEAVVGDFGLAKLMDYKDT-------HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 229 (326)
T ss_dssp TCCEEECCCSSCEECCSSSS-------CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHH
T ss_pred CCCEEeccCccccccCcccc-------cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHH
Confidence 99999999999987643221 1122356999999999984 58999999999999873
No 110
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.97 E-value=6.5e-33 Score=302.21 Aligned_cols=196 Identities=19% Similarity=0.341 Sum_probs=157.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC---cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|++.+.||+|+||.||+|++..+++.||||+++.... .....+.+|++++++++||||+++++++.... ....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CCCc
Confidence 3579999999999999999999999999999999975432 23457889999999999999999999875433 1223
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++++|.+++... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 160 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTE------GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDF 160 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCC
T ss_pred ccEEEEecCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeec
Confidence 458999999999999999754 3689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++.+...... ........||+.|+|||++. +.++||||+||++|+|+
T Consensus 161 g~a~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll 213 (311)
T 3ork_A 161 GIARAIADSGNS-----VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213 (311)
T ss_dssp SCC-----------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred cCcccccccccc-----cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHH
Confidence 999876432211 11222457999999999985 47899999999999873
No 111
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.97 E-value=1.1e-32 Score=302.45 Aligned_cols=189 Identities=20% Similarity=0.276 Sum_probs=152.8
Q ss_pred hhcccccCcccCCccEEEEEEEEC---CCcEEEEEEEeeccC----CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILG---DDEMVVAVKVINLKQ----KGASKSFVSECEALRNIRHRNLIKIITICSSTDF 776 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 776 (914)
.++|++.+.||+|+||.||+|++. .+++.||+|+++... ......+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 92 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT--- 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC---
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc---
Confidence 468999999999999999999985 688999999997432 2334567899999999999999999999644
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEE
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAH 856 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 856 (914)
.+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 93 --~~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~k 161 (327)
T 3a62_A 93 --GGKLYLILEYLSGGELFMQLERE------GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVK 161 (327)
T ss_dssp --SSCEEEEEECCTTEEHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEE
T ss_pred --CCEEEEEEeCCCCCcHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEE
Confidence 34789999999999999999764 3588899999999999999999999 999999999999999999999
Q ss_pred EecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 857 VGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 857 i~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+|||+++...... ......+||+.|+|||++. +.++|+||+||++|+|+
T Consensus 162 l~Dfg~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 215 (327)
T 3a62_A 162 LTDFGLCKESIHDG--------TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215 (327)
T ss_dssp ECCCSCC------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHH
T ss_pred EEeCCcccccccCC--------ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHH
Confidence 99999997543211 1122457999999999984 58899999999999874
No 112
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.1e-32 Score=302.47 Aligned_cols=287 Identities=16% Similarity=0.185 Sum_probs=234.0
Q ss_pred CCCCCCCCCccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCC
Q 042766 58 WNNTMNFCQWTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSF 137 (914)
Q Consensus 58 w~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 137 (914)
|.....+|.|.|+ |+. ++++++ .+|..+. ++|++|+|++|++++..+..++++++|++|+|++|++
T Consensus 23 ~~~~~~~C~~~~~-c~~----------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 88 (353)
T 2z80_A 23 SNQASLSCDRNGI-CKG----------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGI 88 (353)
T ss_dssp ----CCEECTTSE-EEC----------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred CCccCCCCCCCeE-eeC----------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCcc
Confidence 5445678999988 753 455554 4566554 5899999999999977777899999999999999999
Q ss_pred CCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCC-cccccccccceeecccC-CCCCCCCc
Q 042766 138 SGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLP-DSVGNLSAIEVIRITEN-SLGGKIPT 215 (914)
Q Consensus 138 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~ 215 (914)
++..|..++++++|++|+|++|++++..+..|+++++|++|+|++|++++..+ ..+.++++|++|++++| .+++..|.
T Consensus 89 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 168 (353)
T 2z80_A 89 NTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRK 168 (353)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTT
T ss_pred CccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHH
Confidence 98888899999999999999999996555569999999999999999995433 47999999999999999 57777788
Q ss_pred cchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccc---c
Q 042766 216 TLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLS---N 292 (914)
Q Consensus 216 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~ 292 (914)
.|+++++|++|++++|++++..|..|..+++|++|++++|.++ .+|...+..+++|++|+|++|++++..+..+. .
T Consensus 169 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~ 247 (353)
T 2z80_A 169 DFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGET 247 (353)
T ss_dssp TTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC------C
T ss_pred HccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccccccccccccc
Confidence 9999999999999999999999999999999999999999996 45666666799999999999999976655443 3
Q ss_pred ccccccccccCccCCc----cccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcC
Q 042766 293 ASNLELLDLPSNQFKG----KVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELP 365 (914)
Q Consensus 293 l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 365 (914)
.+.++.++|++|.+++ .+|..+..+++|++|++++|+++.++.. .+..+++|++|+|++|++.+..|
T Consensus 248 ~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~------~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 248 NSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDG------IFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTT------TTTTCTTCCEEECCSSCBCCCHH
T ss_pred cchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHH------HHhcCCCCCEEEeeCCCccCcCC
Confidence 5667777888887765 3456677888888888888888765332 24677888888888888876554
No 113
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.97 E-value=1.7e-32 Score=317.37 Aligned_cols=193 Identities=22% Similarity=0.329 Sum_probs=165.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|...+.||+|+||+||+|+++.+++.||+|++.... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-----~~ 258 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET-----KT 258 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-----CC
Confidence 367999999999999999999999999999999996432 3345678999999999999999999998543 45
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||++||+|.+++..... ....+++..+..++.||+.||+|||++ +|+||||||+|||++.+|.+||+||
T Consensus 259 ~l~lVmE~~~gg~L~~~l~~~~~--~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DF 333 (543)
T 3c4z_A 259 DLCLVMTIMNGGDIRYHIYNVDE--DNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDL 333 (543)
T ss_dssp EEEEEECCCTTCBHHHHHHTSST--TSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEEeccCCCHHHHHHHhhc--ccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeec
Confidence 78999999999999999976431 124689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+|+.+..... .....+||+.|||||++. +.++|+||+||++|||+
T Consensus 334 Gla~~~~~~~~--------~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyell 383 (543)
T 3c4z_A 334 GLAVELKAGQT--------KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMI 383 (543)
T ss_dssp TTCEECCTTCC--------CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred ceeeeccCCCc--------ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHH
Confidence 99987543211 122358999999999994 58899999999999973
No 114
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.97 E-value=3e-32 Score=298.17 Aligned_cols=192 Identities=25% Similarity=0.370 Sum_probs=163.4
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.... ....+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~~~ 85 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT---TRHKV 85 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---TCCEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCC---CceEE
Confidence 57999999999999999999999999999999997433 334577889999999999999999999875432 34679
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee----cCCCcEEEec
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL----DYDMVAHVGD 859 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl----~~~~~~ki~D 859 (914)
+||||+++++|.+++..... ...+++.+++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 86 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~D 159 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSN---AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTD 159 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGG---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECC
T ss_pred EEEeCCCCCCHHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEcc
Confidence 99999999999999986531 23489999999999999999999999 99999999999999 7788899999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh------------hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------------~~~~Di~s~g~~~~~~f 914 (914)
||+|+...... ......||+.|+|||++. +.++||||+||+++||+
T Consensus 160 fg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~ 217 (319)
T 4euu_A 160 FGAARELEDDE---------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAA 217 (319)
T ss_dssp CTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHH
T ss_pred CCCceecCCCC---------ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHH
Confidence 99998764321 112357999999999875 36899999999999873
No 115
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.97 E-value=2.7e-32 Score=307.28 Aligned_cols=198 Identities=18% Similarity=0.157 Sum_probs=165.7
Q ss_pred hhcccccCcccCC--ccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQG--RFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G--~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.++|++.+.||+| +||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.. .
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~ 98 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-----D 98 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----T
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE-----C
Confidence 4689999999999 99999999999999999999997543 2334678899999999999999999999654 3
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~d 171 (389)
T 3gni_B 99 NELWVVTSFMAYGSAKDLICTHFM----DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSG 171 (389)
T ss_dssp TEEEEEEECCTTCBHHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECC
T ss_pred CEEEEEEEccCCCCHHHHHhhhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcc
Confidence 478999999999999999976532 4689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh------hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~~~~~~f 914 (914)
||.+........... ..........||+.|+|||++. +.++||||+||++|||+
T Consensus 172 fg~~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~ 231 (389)
T 3gni_B 172 LRSNLSMISHGQRQR-VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELA 231 (389)
T ss_dssp GGGCEECEETTEECS-CBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHH
T ss_pred cccceeecccccccc-ccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHH
Confidence 999876543221111 1111223357999999999984 47899999999999873
No 116
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.97 E-value=1.9e-32 Score=301.30 Aligned_cols=193 Identities=22% Similarity=0.319 Sum_probs=162.5
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
++|++.+.||+|+||.||+|++..+++.||||++..... .+.+.+|+++++++ +||||+++++++.. ....+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-----~~~~~ 81 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPC-----GKYNA 81 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEE-----TTEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEec-----CCccE
Confidence 579999999999999999999999999999999864432 34688999999999 99999999998654 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc-----EEEe
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV-----AHVG 858 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~-----~ki~ 858 (914)
+||||+ +++|.+++...+ ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 82 lv~e~~-~~~L~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~ 152 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLCD-----RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHII 152 (330)
T ss_dssp EEEECC-CCBHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEEC
T ss_pred EEEEeC-CCCHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEE
Confidence 999999 999999998643 4789999999999999999999999 9999999999999998887 9999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||+|+.+....... ...........||+.|+|||++. +.++|+|||||++|||+
T Consensus 153 DFg~a~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell 211 (330)
T 2izr_A 153 DFALAKEYIDPETKK-HIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFL 211 (330)
T ss_dssp CCTTCEESBCTTTCC-BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred EcccceeeecCCCCc-cccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHh
Confidence 999998765432111 11111233568999999999995 57999999999999873
No 117
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.97 E-value=1.9e-32 Score=305.63 Aligned_cols=186 Identities=24% Similarity=0.327 Sum_probs=155.2
Q ss_pred ccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 707 FSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 707 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+...+.||+|+||.||+|++..+++.||+|+++.......+.+.+|++++++++||||+++++++.. ....++||
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-----~~~~~lv~ 165 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFES-----KNDIVLVM 165 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SSEEEEEE
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-----CCEEEEEE
Confidence 3346789999999999999999999999999986655566789999999999999999999999654 34789999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee--cCCCcEEEecccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL--DYDMVAHVGDFGLAK 864 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl--~~~~~~ki~DFGla~ 864 (914)
||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 166 E~~~~~~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~ 237 (373)
T 2x4f_A 166 EYVDGGELFDRIIDES-----YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLAR 237 (373)
T ss_dssp ECCTTCEEHHHHHHTG-----GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCE
T ss_pred eCCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCce
Confidence 9999999999887543 4689999999999999999999999 99999999999999 567899999999998
Q ss_pred cccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.+.... ......||+.|+|||++. +.++|+||+||+++||+
T Consensus 238 ~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 282 (373)
T 2x4f_A 238 RYKPRE---------KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLL 282 (373)
T ss_dssp ECCTTC---------BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHH
T ss_pred ecCCcc---------ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHH
Confidence 764321 112346999999999984 47899999999999874
No 118
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.97 E-value=1.6e-32 Score=300.52 Aligned_cols=194 Identities=27% Similarity=0.347 Sum_probs=160.1
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++. ++.||||+++... .......+|+.++++++||||+++++++.... ......+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGT-SVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCC-CCCceEE
Confidence 468999999999999999999986 7899999996433 23445677999999999999999999976543 1234579
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhC-------CCCCcEecCCCCCCeeecCCCcEE
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH-------CQPPMVHGDLKPSNVLLDYDMVAH 856 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~-------~~~~ivHrDlkp~NILl~~~~~~k 856 (914)
+||||+++|+|.++++.. .+++..++.++.|++.||+|||+. +.++|+||||||+||+++.++.+|
T Consensus 99 lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~k 171 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKAN-------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171 (322)
T ss_dssp EEEECCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEE
T ss_pred EEEecCCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEE
Confidence 999999999999999753 589999999999999999999975 134899999999999999999999
Q ss_pred EecccccccccccccccccCCCCccccccCcccccccchhhh---------hhcccCcccccccccC
Q 042766 857 VGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM---------LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 857 i~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~---------~~~Di~s~g~~~~~~f 914 (914)
|+|||+|+....... ........||+.|+|||++.+ .++|||||||++|||+
T Consensus 172 L~DFg~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~ 232 (322)
T 3soc_A 172 IADFGLALKFEAGKS------AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELA 232 (322)
T ss_dssp ECCCTTCEEECTTSC------CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EccCCcccccccccC------ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHH
Confidence 999999987654321 111223579999999999753 5779999999999873
No 119
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.97 E-value=7.9e-33 Score=309.78 Aligned_cols=192 Identities=23% Similarity=0.382 Sum_probs=161.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.++|.+.+.||+|+||.||+|++..+++.||||+++... ....+++.+|++++++++||||+++++++.. ....
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~~ 187 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-----KQPI 187 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS-----SSSC
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec-----CCCc
Confidence 358899999999999999999999899999999986432 2233578899999999999999999999643 3467
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++|+|.+++...+ ..+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 188 ~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~ 259 (377)
T 3cbl_A 188 YIVMELVQGGDFLTFLRTEG-----ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGM 259 (377)
T ss_dssp EEEEECCTTCBHHHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred EEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCC
Confidence 99999999999999997543 4688999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+...+...... .....+|+.|+|||++. +.++|||||||+++||+
T Consensus 260 s~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~ 309 (377)
T 3cbl_A 260 SREEADGVYAAS------GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETF 309 (377)
T ss_dssp CEECTTSEEECC------SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHH
T ss_pred ceecCCCceeec------CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHH
Confidence 986543221110 11224678899999985 58999999999999874
No 120
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.97 E-value=3.5e-32 Score=294.98 Aligned_cols=191 Identities=26% Similarity=0.383 Sum_probs=157.2
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHh--cCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRN--IRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|++.+.||+|+||.||+|++ +++.||||++... ..+.+.+|.+++.. ++||||+++++++.... .....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~-~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSR-HSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE-TTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeecccc-CCCce
Confidence 46899999999999999999998 5889999998643 34566677777766 79999999999875432 33456
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCcEecCCCCCCeeecCCC
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH--------HHCQPPMVHGDLKPSNVLLDYDM 853 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH--------~~~~~~ivHrDlkp~NILl~~~~ 853 (914)
.++||||+++|+|.++++. ..+++..++.++.|++.|++||| +. +|+||||||+||+++.++
T Consensus 81 ~~lv~e~~~~g~L~~~l~~-------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~ 150 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQL-------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNG 150 (301)
T ss_dssp EEEEECCCTTCBHHHHHTT-------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTS
T ss_pred eEEehhhccCCCHHHHHhh-------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCC
Confidence 8999999999999999964 35899999999999999999999 76 999999999999999999
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhhh----------hhcccCcccccccccC
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM----------LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~----------~~~Di~s~g~~~~~~f 914 (914)
.+||+|||+|+.......... .......||+.|+|||++.+ .++||||+||+++||+
T Consensus 151 ~~kl~Dfg~a~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~ 217 (301)
T 3q4u_A 151 QCCIADLGLAVMHSQSTNQLD----VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217 (301)
T ss_dssp CEEECCCTTCEEEETTTTEEE----CCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEeeCCCeeeccccccccc----ccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHH
Confidence 999999999986544321110 11123479999999999853 5899999999999873
No 121
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.97 E-value=2.3e-32 Score=297.23 Aligned_cols=195 Identities=28% Similarity=0.418 Sum_probs=154.3
Q ss_pred HHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhcCCCCcceEEeEeecCCC
Q 042766 699 ELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRHRNLIKIITICSSTDF 776 (914)
Q Consensus 699 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 776 (914)
++.....+|++.+.||+|+||+||+|++ +++.||||++..... ...+.+.+|++++++++||||+++++++..
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 105 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ--- 105 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE---
Confidence 3334457899999999999999999988 478899999865432 334678999999999999999999999643
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC--cEecCCCCCCeeecCCCc
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPP--MVHGDLKPSNVLLDYDMV 854 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~--ivHrDlkp~NILl~~~~~ 854 (914)
....++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ + |+||||||+||+++.++.
T Consensus 106 --~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~ 177 (309)
T 3p86_A 106 --PPNLSIVTEYLSRGSLYRLLHKSGA---REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYT 177 (309)
T ss_dssp --TTCCEEEEECCTTCBHHHHHHSTTH---HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCC
T ss_pred --CCceEEEEecCCCCcHHHHHhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCc
Confidence 3468999999999999999986431 23589999999999999999999998 7 999999999999999999
Q ss_pred EEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+||+|||+++...... .......||+.|+|||++. +.++||||+||++|+|+
T Consensus 178 ~kL~Dfg~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 233 (309)
T 3p86_A 178 VKVCDFGLSRLKASTF--------LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELA 233 (309)
T ss_dssp EEECCCC-------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred EEECCCCCCccccccc--------cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHH
Confidence 9999999998543221 1122457999999999995 47999999999999873
No 122
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.97 E-value=9.7e-33 Score=316.33 Aligned_cols=189 Identities=25% Similarity=0.289 Sum_probs=153.8
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|++.+.||+|+||.||+|++..+++.||||+++.. .......+.+|++++++++||||+++++++... +
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~-----~ 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH-----D 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEET-----T
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeC-----C
Confidence 46899999999999999999999999999999999743 333446778999999999999999999996543 4
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH-HCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~-~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|
T Consensus 222 ~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~D 292 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLSRE------RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITD 292 (446)
T ss_dssp EEEEEECCCSSCBHHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECC
T ss_pred EEEEEEeeCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEcc
Confidence 789999999999999999764 468999999999999999999998 7 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+|+...... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 293 FG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 343 (446)
T 4ejn_A 293 FGLCKEGIKDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 343 (446)
T ss_dssp CCCCCTTCC-------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHH
T ss_pred CCCceeccCCC--------cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHh
Confidence 99998543221 1122467999999999995 58999999999999873
No 123
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.97 E-value=1.2e-32 Score=307.34 Aligned_cols=194 Identities=15% Similarity=0.182 Sum_probs=159.1
Q ss_pred HhhcccccCcccCCccEEEEEEE-----ECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC---CCCcceEEeEeecC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGI-----LGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR---HRNLIKIITICSST 774 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 774 (914)
..++|.+.+.||+|+||+||+|+ +..+++.||||+++.. ....+.+|++++++++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34689999999999999999994 5667889999998643 4467888888888887 99999999996543
Q ss_pred CCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC---
Q 042766 775 DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY--- 851 (914)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~--- 851 (914)
+..++||||+++|+|.+++...+.. ....+++.+++.|+.|++.||+|||++ +||||||||+|||++.
T Consensus 140 -----~~~~lv~e~~~~g~L~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~ 210 (365)
T 3e7e_A 140 -----NGSVLVGELYSYGTLLNAINLYKNT-PEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFL 210 (365)
T ss_dssp -----SCEEEEECCCCSCBHHHHHHHHHTS-TTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGT
T ss_pred -----CCcEEEEeccCCCcHHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEeccccc
Confidence 3679999999999999999753211 125699999999999999999999999 9999999999999998
Q ss_pred --------CCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 852 --------DMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 852 --------~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++.+||+|||+|+.+..... .......+||+.|||||++. +.++||||+||++|||+
T Consensus 211 ~~~~~~~~~~~~kl~DFG~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 279 (365)
T 3e7e_A 211 EQDDEDDLSAGLALIDLGQSIDMKLFPK------GTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCML 279 (365)
T ss_dssp CC------CTTEEECCCTTCEEGGGSCT------TEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHH
T ss_pred CccccccccCCEEEeeCchhhhhhccCC------CceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHH
Confidence 89999999999976542111 11223467999999999994 58999999999999873
No 124
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.97 E-value=2.9e-32 Score=303.07 Aligned_cols=187 Identities=24% Similarity=0.294 Sum_probs=153.7
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||+||+|++..+++.||||++.... ...+.+.+|+.++++++||||+++++++.. ....+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~~~ 92 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILT-----PTHLA 92 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SSEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEee-----CCEEE
Confidence 468999999999999999999999999999999997433 334678899999999999999999999654 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc--EEEeccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV--AHVGDFG 861 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~--~ki~DFG 861 (914)
+||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||
T Consensus 93 lv~e~~~~~~L~~~l~~~------~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg 163 (361)
T 3uc3_A 93 IIMEYASGGELYERICNA------GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFG 163 (361)
T ss_dssp EEEECCCSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCC
T ss_pred EEEEeCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecC
Confidence 999999999999999754 3689999999999999999999999 9999999999999987765 9999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+|+...... ......||+.|+|||++. +.++||||+||++|+|+
T Consensus 164 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 212 (361)
T 3uc3_A 164 YSKSSVLHS---------QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVML 212 (361)
T ss_dssp CC------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccC---------CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHH
Confidence 997432211 112357999999999985 34589999999999873
No 125
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.97 E-value=1.5e-32 Score=305.85 Aligned_cols=207 Identities=21% Similarity=0.328 Sum_probs=167.9
Q ss_pred cCHHHHHHHhhcccccCcccCCccEEEEEEE-----ECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhc-CCCCcceE
Q 042766 695 VSYAELSKATSEFSSSNMIGQGRFGTVYKGI-----LGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNI-RHRNLIKI 767 (914)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l 767 (914)
+...++....++|++.+.||+|+||.||+|+ ...+++.||||+++... ....+.+.+|+++++++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 3445555667899999999999999999999 55677999999997543 23346799999999999 79999999
Q ss_pred EeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcc------------------------------------------
Q 042766 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQV------------------------------------------ 805 (914)
Q Consensus 768 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------------------------------ 805 (914)
++++... ....++||||+++|+|.+++.......
T Consensus 92 ~~~~~~~----~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (359)
T 3vhe_A 92 LGACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGF 167 (359)
T ss_dssp EEEECST----TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------
T ss_pred eeeeecC----CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccc
Confidence 9997543 245789999999999999998653210
Q ss_pred ------------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccc
Q 042766 806 ------------------EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLS 867 (914)
Q Consensus 806 ------------------~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~ 867 (914)
....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 244 (359)
T 3vhe_A 168 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY 244 (359)
T ss_dssp ----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred ccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeec
Confidence 012289999999999999999999999 99999999999999999999999999998654
Q ss_pred ccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 868 NHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
..... .......||+.|||||++. +.++||||+||++|||+
T Consensus 245 ~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell 289 (359)
T 3vhe_A 245 KDPDY------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 289 (359)
T ss_dssp SCTTC------EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHT
T ss_pred ccccc------hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHH
Confidence 32211 1122456899999999984 58999999999999874
No 126
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.97 E-value=6e-32 Score=295.39 Aligned_cols=195 Identities=24% Similarity=0.303 Sum_probs=157.5
Q ss_pred hccccc-CcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSS-NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
+.|++. +.||+|+||.||+|++..+++.||||+++.......+.+.+|+++++++ +||||+++++++.. .+..
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-----~~~~ 86 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-----EDRF 86 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEee-----CCEE
Confidence 467774 7899999999999999989999999999866666678899999999985 79999999999654 3478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc---EEEec
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV---AHVGD 859 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~---~ki~D 859 (914)
++||||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++. +||+|
T Consensus 87 ~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~D 157 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHKR------RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICD 157 (316)
T ss_dssp EEEEECCTTCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECC
T ss_pred EEEEEcCCCCcHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEE
Confidence 9999999999999999764 3688999999999999999999999 9999999999999998775 99999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~~f 914 (914)
||+++........... ........+||+.|+|||++. +.++||||+||++|||+
T Consensus 158 fg~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~ 220 (316)
T 2ac3_A 158 FDLGSGIKLNGDCSPI-STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL 220 (316)
T ss_dssp TTCCC--------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred ccCccccccCCccccc-cccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHH
Confidence 9999865432111000 111122456999999999874 47899999999999873
No 127
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.97 E-value=3.6e-32 Score=296.19 Aligned_cols=188 Identities=27% Similarity=0.411 Sum_probs=157.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|++.+.||+|+||+||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++. ....
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~ 93 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH-----SERC 93 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----CSSC
T ss_pred HhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEc-----cCCE
Confidence 468999999999999999999996 58899999996443 233467889999999999999999999954 3457
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++ ++.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~lv~e~~~~-~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 164 (311)
T 3niz_A 94 LTLVFEFMEK-DLKKVLDENK-----TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFG 164 (311)
T ss_dssp EEEEEECCSE-EHHHHHHTCT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEcCCCC-CHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCc
Confidence 8999999974 8888887643 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+|+...... .......||+.|+|||++. +.++||||+||++|+|+
T Consensus 165 ~a~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll 214 (311)
T 3niz_A 165 LARAFGIPV--------RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMI 214 (311)
T ss_dssp TCEETTSCC--------C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHH
T ss_pred CceecCCCc--------ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHH
Confidence 998654221 1122357899999999984 47899999999999873
No 128
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=4.6e-32 Score=289.01 Aligned_cols=189 Identities=29% Similarity=0.470 Sum_probs=161.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ...+++.+|++++++++||||+++++++.. ....+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 81 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-----QAPIC 81 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECS-----SSSEE
T ss_pred hhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEec-----CCceE
Confidence 368999999999999999999997 46779999997433 345789999999999999999999999643 34689
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++.... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 82 lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 153 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRTQR-----GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMT 153 (269)
T ss_dssp EEEECCTTCBHHHHHHTTT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGG
T ss_pred EEEEeCCCCcHHHHHHhcC-----cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccc
Confidence 9999999999999997643 4689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........ ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 154 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll 201 (269)
T 4hcu_A 154 RFVLDDQYT-------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 201 (269)
T ss_dssp GGBCCHHHH-------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccc-------cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHh
Confidence 866443211 112345788999999995 58999999999999873
No 129
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.97 E-value=7e-32 Score=288.87 Aligned_cols=189 Identities=25% Similarity=0.258 Sum_probs=165.9
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
..++|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|++++++++||||+++++++.. ....
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 81 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED-----NTDI 81 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SSEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-----CCeE
Confidence 34689999999999999999999999999999999986666667889999999999999999999999653 3478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee---cCCCcEEEec
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGD 859 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl---~~~~~~ki~D 859 (914)
++||||+++++|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|
T Consensus 82 ~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~D 152 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVHK------RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLID 152 (277)
T ss_dssp EEEEECCCSCBHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred EEEEeccCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEe
Confidence 9999999999999998764 4689999999999999999999999 99999999999999 7889999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh---hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---~~~~Di~s~g~~~~~~f 914 (914)
||+++...... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 153 fg~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~ 201 (277)
T 3f3z_A 153 FGLAARFKPGK---------MMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLL 201 (277)
T ss_dssp CTTCEECCTTS---------CBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHH
T ss_pred cccceeccCcc---------chhccCCCCCccChHHhcccCCchhhehhHHHHHHHHH
Confidence 99998654321 112356999999999985 58999999999999873
No 130
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.97 E-value=2.9e-32 Score=312.69 Aligned_cols=190 Identities=23% Similarity=0.287 Sum_probs=156.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCC-CCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTD-FEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~ 780 (914)
.++|++.+.||+|+||+||+|++..+++.||||++... .....+++.+|+++++.++||||+++++++.... .+...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46899999999999999999999999999999999743 3344568889999999999999999999976443 23445
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++ ++.+.+. ..+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 141 ~~~lv~E~~~~-~l~~~~~--------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DF 208 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ--------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 208 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT--------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeCCCC-CHHHHHh--------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEE
Confidence 78999999975 5777664 2478899999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+|+...... .....+||+.|+|||++. +.++||||+||++|||+
T Consensus 209 G~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 257 (464)
T 3ttj_A 209 GLARTAGTSF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257 (464)
T ss_dssp CCC-----CC---------CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred EeeeecCCCc---------ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence 9998654321 122467999999999995 48999999999999873
No 131
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.4e-32 Score=306.41 Aligned_cols=197 Identities=23% Similarity=0.391 Sum_probs=160.1
Q ss_pred hhcccccCcccCCccEEEEEEEE-----CCCcEEEEEEEeecc-CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGIL-----GDDEMVVAVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFE 777 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 777 (914)
.++|++.+.||+|+||+||+|++ ..+++.||||+++.. .......+.+|+.++++++||||+++++++..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---- 145 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ---- 145 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 35799999999999999999995 456789999998643 23344578899999999999999999999643
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCc-ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC---
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQ-VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM--- 853 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~--- 853 (914)
....++||||+++|+|.+++...+.. .....+++.+++.++.|++.||+|||++ +|+||||||+|||++.++
T Consensus 146 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~ 221 (367)
T 3l9p_A 146 -SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 221 (367)
T ss_dssp -SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred -CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCc
Confidence 34679999999999999999865321 1224689999999999999999999999 999999999999999555
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.+||+|||+|+........ .......||+.|||||++. +.++|||||||+++||+
T Consensus 222 ~~kL~DFG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ell 280 (367)
T 3l9p_A 222 VAKIGDFGMARDIYRAGYY------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280 (367)
T ss_dssp CEEECCCHHHHHHHHHSSC------TTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred eEEECCCcccccccccccc------ccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHH
Confidence 5999999999865432211 1122356899999999984 58999999999999874
No 132
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=3.5e-32 Score=306.14 Aligned_cols=199 Identities=24% Similarity=0.357 Sum_probs=154.1
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCC
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEG 778 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 778 (914)
...++|++.+.||+|+||.||+|++..+++.||||++... .....+++.+|+.+++++. ||||+++++++... .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~---~ 82 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD---N 82 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT---T
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC---C
Confidence 3457899999999999999999999999999999998533 2334567889999999997 99999999997542 2
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
....++||||++ ++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 83 ~~~~~lv~e~~~-~~L~~~~~~-------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~ 151 (388)
T 3oz6_A 83 DRDVYLVFDYME-TDLHAVIRA-------NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVA 151 (388)
T ss_dssp SSCEEEEEECCS-EEHHHHHHH-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred CCEEEEEecccC-cCHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEec
Confidence 346899999997 599999875 3588899999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccc-------------cCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIA-------------SKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~-------------~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|||+|+.+........ ..........+||+.|+|||++. +.++||||+||+++||+
T Consensus 152 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell 225 (388)
T 3oz6_A 152 DFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL 225 (388)
T ss_dssp CCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred CCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHH
Confidence 9999987643111000 00111223468999999999984 47899999999999873
No 133
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.97 E-value=4.9e-32 Score=298.85 Aligned_cols=199 Identities=29% Similarity=0.451 Sum_probs=157.1
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHH--HHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEA--LRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|++.+.||+|+||.||+|++ +++.||||++.... ...+..|.++ ++.++||||+++++++.....++...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 46899999999999999999987 57899999996432 2344445554 44589999999998766555556667
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCC------CCCcEecCCCCCCeeecCCCcE
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHC------QPPMVHGDLKPSNVLLDYDMVA 855 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~------~~~ivHrDlkp~NILl~~~~~~ 855 (914)
.++||||+++|+|.+++... ..++..+..++.|++.||+|||+.+ .++|+||||||+|||++.++.+
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLH-------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred EEEEEecCCCCcHHHHHhhc-------ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 89999999999999999754 3588899999999999999999863 3389999999999999999999
Q ss_pred EEecccccccccccccccccCCCCccccccCcccccccchhhh-----------hhcccCcccccccccC
Q 042766 856 HVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM-----------LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 856 ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~-----------~~~Di~s~g~~~~~~f 914 (914)
||+|||+|+.+...................||+.|+|||++.+ .++|||||||++|||+
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell 229 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHH
Confidence 9999999987654322111111222334579999999999853 6899999999999873
No 134
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.97 E-value=3.2e-32 Score=311.72 Aligned_cols=188 Identities=28% Similarity=0.391 Sum_probs=163.6
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|.+.+.||+|+||.||+|++..+|+.||||+++... ....+.+.+|+++++.++||||+++++++.. ..
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~-----~~ 89 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST-----PS 89 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SS
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-----CC
Confidence 357999999999999999999999999999999996432 2345688999999999999999999999654 34
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 90 ~~~lv~E~~~gg~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DF 160 (476)
T 2y94_A 90 DIFMVMEYVSGGELFDYICKN------GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADF 160 (476)
T ss_dssp EEEEEEECCSSEEHHHHTTSS------SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred EEEEEEeCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEec
Confidence 789999999999999999754 3689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+|+...... .....+||+.|+|||++. +.++||||+||++|+|+
T Consensus 161 G~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell 210 (476)
T 2y94_A 161 GLSNMMSDGE---------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALL 210 (476)
T ss_dssp SSCEECCTTC---------CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHH
T ss_pred cchhhccccc---------cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHh
Confidence 9998754321 112357999999999985 47899999999999873
No 135
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.97 E-value=1.9e-32 Score=295.22 Aligned_cols=186 Identities=22% Similarity=0.383 Sum_probs=161.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCc-------EEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDE-------MVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDF 776 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 776 (914)
.++|++.+.||+|+||.||+|++..++ ..||+|+++.......+.+.+|++++++++||||+++++++..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC--- 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC---
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe---
Confidence 358999999999999999999987655 5799999976666677889999999999999999999999654
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc--
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV-- 854 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~-- 854 (914)
.+..++||||+++|+|.+++...+ ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 84 --~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 153 (289)
T 4fvq_A 84 --GDENILVQEFVKFGSLDTYLKKNK-----NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRK 153 (289)
T ss_dssp --TTCCEEEEECCTTCBHHHHHHHTG-----GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGG
T ss_pred --CCCCEEEEECCCCCCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccc
Confidence 346789999999999999998653 3589999999999999999999999 9999999999999998887
Q ss_pred ------EEEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 855 ------AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ------~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+||+|||+++..... ....||+.|+|||++. +.++||||+||+++||+
T Consensus 154 ~~~~~~~kl~Dfg~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~ 212 (289)
T 4fvq_A 154 TGNPPFIKLSDPGISITVLPK------------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEIC 212 (289)
T ss_dssp GTBCCEEEECCCCSCTTTSCH------------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHH
T ss_pred ccccceeeeccCcccccccCc------------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHH
Confidence 999999999754321 1245899999999884 47899999999999873
No 136
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.97 E-value=3.8e-32 Score=300.70 Aligned_cols=186 Identities=26% Similarity=0.337 Sum_probs=146.9
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++..+++.||||+++... ..+.+.+|++++++++||||+++++++.. ....+
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~ 124 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFET-----PTEIS 124 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEEC-----SSEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEec-----CCeEE
Confidence 467999999999999999999999999999999997432 34678899999999999999999999654 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC---CCcEEEecc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY---DMVAHVGDF 860 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~---~~~~ki~DF 860 (914)
+||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 125 lv~e~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Df 195 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVEK------GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADF 195 (349)
T ss_dssp EEECCCCSCBHHHHHTTC------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEeCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccC
Confidence 999999999999999764 3589999999999999999999999 9999999999999975 889999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++...... ......||+.|+|||++. +.++||||+||++|||+
T Consensus 196 g~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 244 (349)
T 2w4o_A 196 GLSKIVEHQV---------LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILL 244 (349)
T ss_dssp C-------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred ccccccCccc---------ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHH
Confidence 9998654321 112357999999999985 57999999999999873
No 137
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.97 E-value=6.6e-32 Score=297.46 Aligned_cols=186 Identities=26% Similarity=0.325 Sum_probs=157.5
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCce
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 781 (914)
..++|++.+.||+|+||+||+|+++.+++.||||+++.... ...+|++++.++ +||||+++++++. ....
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~-----~~~~ 90 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYD-----DGKY 90 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEE-----CSSE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEE-----cCCE
Confidence 45689999999999999999999999999999999975433 235688888888 7999999999954 3458
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC----CcEEE
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD----MVAHV 857 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~----~~~ki 857 (914)
.++||||++||+|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+||++..+ +.+||
T Consensus 91 ~~lv~E~~~gg~L~~~i~~~------~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl 161 (342)
T 2qr7_A 91 VYVVTELMKGGELLDKILRQ------KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRI 161 (342)
T ss_dssp EEEEECCCCSCBHHHHHHTC------TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEE
T ss_pred EEEEEeCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEE
Confidence 89999999999999999765 3689999999999999999999999 99999999999998543 35999
Q ss_pred ecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+|||+|+....... .....+||+.|+|||++. +.++|+||+||++|||+
T Consensus 162 ~Dfg~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 214 (342)
T 2qr7_A 162 CDFGFAKQLRAENG--------LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTML 214 (342)
T ss_dssp CCCTTCEECBCTTC--------CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCcccCcCCCC--------ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHh
Confidence 99999986543211 122357999999999984 58999999999999873
No 138
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.97 E-value=1.9e-32 Score=305.82 Aligned_cols=191 Identities=26% Similarity=0.469 Sum_probs=150.1
Q ss_pred hcccccCcccCCccEEEEEEEEC---CCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILG---DDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
++|++.+.||+|+||.||+|++. .++..||||+++... ....+++.+|++++++++||||+++++++.. ..
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~ 119 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK-----SK 119 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----SS
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-----CC
Confidence 57999999999999999999986 467789999997543 3345689999999999999999999999643 34
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++|+|.+++...+ ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 120 ~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 191 (373)
T 2qol_A 120 PVMIVTEYMENGSLDSFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 191 (373)
T ss_dssp SCEEEEECCTTCBHHHHHHTTT-----TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred ceEEEEeCCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcC
Confidence 6899999999999999997653 4689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
|+++........ ........+|+.|+|||++. +.++|||||||+++|+
T Consensus 192 g~a~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~el 243 (373)
T 2qol_A 192 GLGRVLEDDPEA-----AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243 (373)
T ss_dssp ---------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ccccccccCCcc-----ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHH
Confidence 999876532211 01112234678999999995 5889999999999985
No 139
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.97 E-value=5.1e-32 Score=299.27 Aligned_cols=184 Identities=28% Similarity=0.376 Sum_probs=158.9
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC---cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
+.|+..+.||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++... ..
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~ 128 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE-----HT 128 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-----Ce
Confidence 468999999999999999999999999999999975432 2235788999999999999999999996543 47
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||++ |++.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 129 ~~lv~e~~~-g~l~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 199 (348)
T 1u5q_A 129 AWLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 199 (348)
T ss_dssp EEEEEECCS-EEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCT
T ss_pred EEEEEecCC-CCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeecc
Confidence 899999997 68888886433 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-------hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~f 914 (914)
+++..... ....||+.|+|||++. +.++|||||||+++||+
T Consensus 200 ~a~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell 247 (348)
T 1u5q_A 200 SASIMAPA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247 (348)
T ss_dssp TCBSSSSB------------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHH
T ss_pred CceecCCC------------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHH
Confidence 99765321 1357999999999983 47899999999999873
No 140
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.97 E-value=6.1e-32 Score=294.39 Aligned_cols=187 Identities=22% Similarity=0.236 Sum_probs=155.7
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|+..+.||+|+||+||+|++..+++.||||++..... .......+|+..+.++ +||||+++++++.. ..
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-----~~ 130 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-----GG 130 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TT
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-----CC
Confidence 3689999999999999999999999999999999864332 2334555666666555 89999999999654 34
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+ +++|.+++...+ ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DF 201 (311)
T 3p1a_A 131 ILYLQTELC-GPSLQQHCEAWG-----ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDF 201 (311)
T ss_dssp EEEEEEECC-CCBHHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCC
T ss_pred EEEEEEecc-CCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccc
Confidence 789999999 779999887653 4689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh---hhhcccCccccccccc
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---~~~~Di~s~g~~~~~~ 913 (914)
|+|+...... ......||+.|+|||++. +.++||||+||+++||
T Consensus 202 G~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el 248 (311)
T 3p1a_A 202 GLLVELGTAG---------AGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEV 248 (311)
T ss_dssp TTCEECC---------------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHH
T ss_pred eeeeecccCC---------CCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHH
Confidence 9998654321 112346999999999985 5899999999999987
No 141
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.97 E-value=3.3e-32 Score=299.42 Aligned_cols=190 Identities=24% Similarity=0.351 Sum_probs=162.8
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--------cchHHHHHHHHHHHhcCCCCcceEEeEeec
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--------GASKSFVSECEALRNIRHRNLIKIITICSS 773 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 773 (914)
...++|++.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++++..
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 345789999999999999999999999999999999975431 123467789999999999999999999643
Q ss_pred CCCCCCceEeEEEecccCC-CHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC
Q 042766 774 TDFEGVDFKALVFEYMENG-SLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD 852 (914)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~ 852 (914)
....++||||+.+| +|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 101 -----~~~~~lv~e~~~~g~~l~~~~~~~------~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 166 (335)
T 3dls_A 101 -----QGFFQLVMEKHGSGLDLFAFIDRH------PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAED 166 (335)
T ss_dssp -----SSEEEEEEECCTTSCBHHHHHHTC------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred -----CCEEEEEEEeCCCCccHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCC
Confidence 44789999999776 999999765 3689999999999999999999999 99999999999999999
Q ss_pred CcEEEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 853 MVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 853 ~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+.+||+|||+++...... ......||+.|+|||++. +.++||||+||++|+|+
T Consensus 167 ~~~kL~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~ 224 (335)
T 3dls_A 167 FTIKLIDFGSAAYLERGK---------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224 (335)
T ss_dssp SCEEECCCTTCEECCTTC---------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHH
T ss_pred CcEEEeecccceECCCCC---------ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHH
Confidence 999999999998754321 122357999999999984 56789999999999873
No 142
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.97 E-value=6.1e-32 Score=323.43 Aligned_cols=190 Identities=22% Similarity=0.276 Sum_probs=164.6
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 778 (914)
..++|++.+.||+|+||+||+|+++.+++.||||+++.. .....+.+..|.++++.+ +||+|++++++ ++.
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~-----~~~ 413 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC-----FQT 413 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEE-----CBC
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE-----EEe
Confidence 456899999999999999999999999999999999743 234557788999999988 69999999998 455
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
.+..|+||||++||+|.+++... ..+++.++..|+.||+.||+|||++ +||||||||+|||++.++++||+
T Consensus 414 ~~~~~lV~E~~~gg~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~ 484 (674)
T 3pfq_A 414 MDRLYFVMEYVNGGDLMYHIQQV------GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIA 484 (674)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEEC
T ss_pred CCEEEEEEeCcCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEe
Confidence 56899999999999999999865 3689999999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||+|+...... ......+||+.|||||++. +.++|+||+||++|||+
T Consensus 485 DFGla~~~~~~~--------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyell 536 (674)
T 3pfq_A 485 DFGMCKENIWDG--------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 536 (674)
T ss_dssp CCTTCEECCCTT--------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHH
T ss_pred ecceeeccccCC--------cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHH
Confidence 999998543211 1223468999999999994 68999999999999984
No 143
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.97 E-value=2.9e-32 Score=293.68 Aligned_cols=187 Identities=25% Similarity=0.408 Sum_probs=156.3
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|++++++++||||+++++++.. .+..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 75 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-----KKRL 75 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-----SSCE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc-----CCeE
Confidence 4789999999999999999999 578899999996443 2334788899999999999999999999654 3478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++ +|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~lv~e~~~~-~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 146 (288)
T 1ob3_A 76 VLVFEHLDQ-DLKKLLDVCE-----GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGL 146 (288)
T ss_dssp EEEEECCSE-EHHHHHHTST-----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTH
T ss_pred EEEEEecCC-CHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECcc
Confidence 999999975 9999987643 4688999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+...... .......||+.|+|||++. +.++|+||+||++|||+
T Consensus 147 ~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~ 195 (288)
T 1ob3_A 147 ARAFGIPV--------RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195 (288)
T ss_dssp HHHHCC-----------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHH
T ss_pred ccccCccc--------cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHH
Confidence 98654211 1112346899999999984 57899999999999873
No 144
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.97 E-value=1.3e-31 Score=285.24 Aligned_cols=189 Identities=28% Similarity=0.467 Sum_probs=161.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++. ++..||+|+++... ...+++.+|++++++++||||+++++++. .....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 79 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCS-----KEYPIY 79 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SSSSEE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEc-----cCCceE
Confidence 468999999999999999999887 56789999996443 34567899999999999999999999964 334689
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++...+ ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 80 lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~ 151 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRSHG-----KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMT 151 (268)
T ss_dssp EEEECCTTCBHHHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCE
T ss_pred EEEEccCCCcHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccc
Confidence 9999999999999997643 4689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........ ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 152 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 199 (268)
T 3sxs_A 152 RYVLDDQYV-------SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVF 199 (268)
T ss_dssp EECCTTCEE-------ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHH
T ss_pred eecchhhhh-------cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHH
Confidence 876443211 122345788999999985 48999999999999873
No 145
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.97 E-value=4.9e-32 Score=297.37 Aligned_cols=190 Identities=25% Similarity=0.421 Sum_probs=153.5
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEE----EEEEEeecc-CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMV----VAVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
++|+..+.||+|+||.||+|++..+++. ||+|.++.. .....+.+.+|++++++++||||++++++|...
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 89 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 89 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-----
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----
Confidence 5799999999999999999999877665 577777533 234557899999999999999999999997642
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 90 -~~~~v~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~D 160 (327)
T 3poz_A 90 -TVQLITQLMPFGCLLDYVREHK-----DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 160 (327)
T ss_dssp -SEEEEEECCTTCBHHHHHHHST-----TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECC
T ss_pred -CeEEEEEecCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEcc
Confidence 3678999999999999998654 4689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+|+........ .......||+.|+|||++. +.++|||||||+++||+
T Consensus 161 fg~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell 213 (327)
T 3poz_A 161 FGLAKLLGAEEKE------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213 (327)
T ss_dssp TTHHHHHTTTCC-------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred CcceeEccCCccc------ccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHH
Confidence 9999876433211 1122346789999999985 58999999999999863
No 146
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.97 E-value=5.1e-32 Score=301.98 Aligned_cols=201 Identities=18% Similarity=0.291 Sum_probs=159.9
Q ss_pred HhhcccccCcccCCccEEEEEEEECCC-----cEEEEEEEeeccCCc-----------chHHHHHHHHHHHhcCCCCcce
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDD-----EMVVAVKVINLKQKG-----------ASKSFVSECEALRNIRHRNLIK 766 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~ 766 (914)
..++|++.+.||+|+||.||+|++..+ ++.||||++...... ....+.+|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 345899999999999999999999764 578999998644311 1123445666777888999999
Q ss_pred EEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCC
Q 042766 767 IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSN 846 (914)
Q Consensus 767 l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~N 846 (914)
+++++.... .+..+.++||||+ +++|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+|
T Consensus 113 ~~~~~~~~~-~~~~~~~lv~e~~-g~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~N 182 (364)
T 3op5_A 113 YWGSGLHDK-NGKSYRFMIMDRF-GSDLQKIYEANA-----KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASN 182 (364)
T ss_dssp EEEEEEEEE-TTEEEEEEEEECE-EEEHHHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred EEeeeeecc-CCcceEEEEEeCC-CCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHH
Confidence 999976532 2335689999999 999999997643 4689999999999999999999999 99999999999
Q ss_pred eeec--CCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 847 VLLD--YDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 847 ILl~--~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||++ .++.+||+|||+|+.+......... .........||+.|||||++. +.++|||||||++|||+
T Consensus 183 ill~~~~~~~~kl~DFG~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 255 (364)
T 3op5_A 183 LLLNYKNPDQVYLVDYGLAYRYCPEGVHKAY-AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWL 255 (364)
T ss_dssp EEEESSCTTCEEECCCTTCEESSGGGCCCCS-SCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCeEEEEECCcceecccCCccccc-ccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHH
Confidence 9999 8899999999999877543321111 111223457999999999995 48999999999999874
No 147
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.97 E-value=8.1e-32 Score=295.10 Aligned_cols=185 Identities=22% Similarity=0.293 Sum_probs=142.4
Q ss_pred hccccc---CcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCc
Q 042766 705 SEFSSS---NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 705 ~~~~~~---~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~ 780 (914)
++|++. +.||+|+||.||+|++..+++.||||++... ....+.+|+++++++. ||||+++++++.. ..
T Consensus 8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-----~~ 79 (325)
T 3kn6_A 8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHD-----QL 79 (325)
T ss_dssp HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----SS
T ss_pred hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-----CC
Confidence 345543 7899999999999999999999999998633 3467789999999997 9999999999643 34
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC---cEEE
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM---VAHV 857 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~---~~ki 857 (914)
..++||||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+||
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl 150 (325)
T 3kn6_A 80 HTFLVMELLNGGELFERIKKK------KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKI 150 (325)
T ss_dssp EEEEEECCCCSCBHHHHHHHC------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEE
T ss_pred EEEEEEEccCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEE
Confidence 789999999999999999865 4689999999999999999999999 999999999999998766 8999
Q ss_pred ecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+|||+|+....... .....+||+.|+|||++. +.++||||+||++|+|+
T Consensus 151 ~Dfg~a~~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll 203 (325)
T 3kn6_A 151 IDFGFARLKPPDNQ--------PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTML 203 (325)
T ss_dssp CCCTTCEECCC------------------------------CCCCHHHHHHHHHHHHHHHH
T ss_pred eccccceecCCCCC--------cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHH
Confidence 99999986543211 112357899999999984 58899999999999873
No 148
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=1.3e-32 Score=301.39 Aligned_cols=285 Identities=15% Similarity=0.218 Sum_probs=233.2
Q ss_pred HHhcCCCCCCCCCCCC--CCCCCCccceeecCCCCceEEEecCCCCCccc----cCCCC--CCCCCCCEEEcCCCCCccc
Q 042766 45 KSQLHDPSGVTSSWNN--TMNFCQWTGVTCGHRHQRLTELNLSSQRIGGV----LSPYV--GNLSFLRYINLADNGFRGD 116 (914)
Q Consensus 45 k~~~~~~~~~~~~w~~--~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~----~~~~l--~~l~~L~~L~L~~n~l~~~ 116 (914)
|..+.|+..++.+|+. ..|+|.|.++.|....... .-+...|. ++..+ ...+.+++|+|++|+++ .
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~-----~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~ 95 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNP-----QIETRTGRALKATADLLEDATQPGRVALELRSVPLP-Q 95 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCT-----TSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-S
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccc-----cccccCCcchhhhHHHHhcccccceeEEEccCCCch-h
Confidence 3445566667788974 3489999999884221100 00111111 11111 23477889999999998 8
Q ss_pred CCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccc
Q 042766 117 IPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNL 196 (914)
Q Consensus 117 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 196 (914)
+|..++++++|++|+|++|+++ .+|..++++++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..++..
T Consensus 96 lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~ 173 (328)
T 4fcg_A 96 FPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST 173 (328)
T ss_dssp CCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE
T ss_pred cChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc
Confidence 8888888999999999999998 88888899999999999999888 788888888888888888888888888766541
Q ss_pred cccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceee
Q 042766 197 SAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLG 276 (914)
Q Consensus 197 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~ 276 (914)
..+..|+++++|++|+|++|+++ .+|..+.++++|++|+|++|++++. |.. +..+++|++|+
T Consensus 174 ---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l-~~~-l~~l~~L~~L~ 235 (328)
T 4fcg_A 174 ---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSAL-GPA-IHHLPKLEELD 235 (328)
T ss_dssp ---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCC-CGG-GGGCTTCCEEE
T ss_pred ---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcC-chh-hccCCCCCEEE
Confidence 23345778999999999999999 7899999999999999999999974 544 56899999999
Q ss_pred ccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEecc
Q 042766 277 IGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLS 356 (914)
Q Consensus 277 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls 356 (914)
|++|++.+.+|..+..+++|++|+|++|++.+.+|..|..+++|++|+|++|++.+. +|..+.++++|+.+++.
T Consensus 236 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~------iP~~l~~L~~L~~l~l~ 309 (328)
T 4fcg_A 236 LRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSR------LPSLIAQLPANCIILVP 309 (328)
T ss_dssp CTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCC------CCGGGGGSCTTCEEECC
T ss_pred CcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhh------ccHHHhhccCceEEeCC
Confidence 999999999999999999999999999999999999999999999999999998876 78889999999999999
Q ss_pred ccccC
Q 042766 357 DNQFG 361 (914)
Q Consensus 357 ~N~l~ 361 (914)
.|.+.
T Consensus 310 ~~~~~ 314 (328)
T 4fcg_A 310 PHLQA 314 (328)
T ss_dssp GGGSC
T ss_pred HHHHH
Confidence 88776
No 149
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.97 E-value=5.5e-32 Score=313.51 Aligned_cols=191 Identities=24% Similarity=0.488 Sum_probs=164.0
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
..+|++.+.||+|+||.||+|++..++..||||+++... ...+.+.+|++++++++||||++++++|... ...+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~~ 292 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-----PPFY 292 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SSCE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecC-----CcEE
Confidence 357899999999999999999999889999999996443 3467899999999999999999999996543 3679
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|
T Consensus 293 lv~E~~~~g~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 365 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLS 365 (495)
T ss_dssp EEEECCTTCBHHHHHHHSCT----TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred EEEEccCCCCHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccc
Confidence 99999999999999986432 4688999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........ ......+|+.|+|||++. +.++|||||||+++||+
T Consensus 366 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~ 413 (495)
T 1opk_A 366 RLMTGDTYT-------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 413 (495)
T ss_dssp ECCTTCCEE-------CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred eeccCCcee-------ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHH
Confidence 876432211 112345788999999985 58999999999999874
No 150
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.97 E-value=9.3e-32 Score=303.20 Aligned_cols=192 Identities=25% Similarity=0.370 Sum_probs=163.1
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
++|.+.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.... ....+
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~---~~~~~ 85 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT---TRHKV 85 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---TCCEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCC---CCeeE
Confidence 57999999999999999999999999999999997433 334577889999999999999999999875432 34679
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee----cCCCcEEEec
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL----DYDMVAHVGD 859 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl----~~~~~~ki~D 859 (914)
+||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 86 lv~e~~~~g~L~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~D 159 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSN---AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTD 159 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGG---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECC
T ss_pred EEEecCCCCCHHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEec
Confidence 99999999999999976431 13489999999999999999999999 99999999999999 7778899999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh------------hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------------~~~~Di~s~g~~~~~~f 914 (914)
||+|+...... ......||+.|+|||++. +.++||||+||++|||+
T Consensus 160 FG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~ 217 (396)
T 4eut_A 160 FGAARELEDDE---------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAA 217 (396)
T ss_dssp GGGCEECCCGG---------GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEccCCC---------ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHH
Confidence 99998764322 112357999999999874 47899999999999873
No 151
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.97 E-value=1e-31 Score=294.94 Aligned_cols=194 Identities=23% Similarity=0.347 Sum_probs=165.5
Q ss_pred hcccccCcccCCccEEEEEEEE----CCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 705 SEFSSSNMIGQGRFGTVYKGIL----GDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
++|++.+.||+|+||.||+|++ ..+++.||||++........+.+.+|++++++++||||+++++++... ...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP---GRQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS---SSC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC---CCc
Confidence 5899999999999999999994 568899999999766655667899999999999999999999987532 345
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++++|.+++...+ ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 171 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRHR-----ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADF 171 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCG
T ss_pred eEEEEEeecCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccc
Confidence 7899999999999999997643 3689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++......... .......||+.|+|||++. +.++||||+||++++|+
T Consensus 172 g~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll 224 (327)
T 3lxl_A 172 GLAKLLPLDKDYY-----VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224 (327)
T ss_dssp GGCEECCTTCSEE-----ECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHH
T ss_pred ccceecccCCccc-----eeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHH
Confidence 9998764322111 1112346899999999985 58999999999999873
No 152
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.97 E-value=1.4e-31 Score=287.51 Aligned_cols=190 Identities=26% Similarity=0.460 Sum_probs=159.3
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
..++|++.+.||+|+||.||+|++. ++..||+|+++... ...+++.+|++++++++||||+++++++.. ....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 94 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-----QRPI 94 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECS-----SSSE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEec-----CCCe
Confidence 3468999999999999999999987 67789999997443 345789999999999999999999999643 3478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++++|.+++.... ..+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~ 166 (283)
T 3gen_A 95 FIITEYMANGCLLNYLREMR-----HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGL 166 (283)
T ss_dssp EEEECCCTTCBHHHHHHCGG-----GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTG
T ss_pred EEEEeccCCCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccc
Confidence 99999999999999997643 4689999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++........ ......||+.|+|||++. +.++|+||+||++|+|+
T Consensus 167 ~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~ 215 (283)
T 3gen_A 167 SRYVLDDEYT-------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 215 (283)
T ss_dssp GGGBCCHHHH-------STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHH
T ss_pred cccccccccc-------cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHH
Confidence 9876443211 112345788999999985 58999999999999873
No 153
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.97 E-value=6.6e-32 Score=304.21 Aligned_cols=188 Identities=21% Similarity=0.301 Sum_probs=151.5
Q ss_pred hccccc-CcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHH-hcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSS-NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALR-NIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|.+. +.||+|+||+||+|++..+++.||||+++. ...+.+|++++. ..+||||+++++++... +.+....
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENL-YAGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCcEE
Confidence 466665 789999999999999999999999999852 246778999874 45899999999986532 2234578
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC---CCcEEEec
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY---DMVAHVGD 859 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~---~~~~ki~D 859 (914)
++||||++||+|.+++..... ..+++.++..|+.||+.||+|||+. +|+||||||+|||++. ++.+||+|
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC-------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred EEEEEeCCCCcHHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEe
Confidence 999999999999999986532 4689999999999999999999999 9999999999999997 78999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+|+...... .....+||+.|||||++. +.++||||+||++|||+
T Consensus 208 FG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 257 (400)
T 1nxk_A 208 FGFAKETTSHN---------SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 257 (400)
T ss_dssp CTTCEECC--------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHH
T ss_pred cccccccCCCC---------ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHH
Confidence 99998654221 112457999999999983 58999999999999873
No 154
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.97 E-value=4.9e-32 Score=301.88 Aligned_cols=197 Identities=27% Similarity=0.346 Sum_probs=166.6
Q ss_pred CccCHHHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC-----CCCcceE
Q 042766 693 PMVSYAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR-----HRNLIKI 767 (914)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l 767 (914)
..+++.+.....++|++.+.||+|+||.||+|++..+++.||||+++. .....+.+.+|++++++++ ||||+++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 344555555667899999999999999999999999999999999863 2334567788999999996 9999999
Q ss_pred EeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCe
Q 042766 768 ITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNV 847 (914)
Q Consensus 768 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NI 847 (914)
++++... +..++||||+ +++|.+++..... ..+++.++..++.|++.||+|||++ +|+||||||+||
T Consensus 102 ~~~~~~~-----~~~~lv~e~~-~~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NI 168 (360)
T 3llt_A 102 HGKFMYY-----DHMCLIFEPL-GPSLYEIITRNNY----NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENI 168 (360)
T ss_dssp EEEEEET-----TEEEEEECCC-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred cceeeEC-----CeeEEEEcCC-CCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccE
Confidence 9996543 4789999999 9999999986532 3589999999999999999999999 999999999999
Q ss_pred eecC-------------------------CCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----h
Q 042766 848 LLDY-------------------------DMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----M 898 (914)
Q Consensus 848 Ll~~-------------------------~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~ 898 (914)
|++. ++.+||+|||+|+..... .....||+.|+|||++. +
T Consensus 169 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~ 237 (360)
T 3llt_A 169 LLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----------HGSIINTRQYRAPEVILNLGWD 237 (360)
T ss_dssp EESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----------CCSCCSCGGGCCHHHHTTCCCC
T ss_pred EEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC-----------CcCccCcccccCcHHHcCCCCC
Confidence 9975 789999999999864321 11357999999999985 5
Q ss_pred hhcccCcccccccccC
Q 042766 899 LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 899 ~~~Di~s~g~~~~~~f 914 (914)
.++||||+||++|+|+
T Consensus 238 ~~~DiwslG~il~ell 253 (360)
T 3llt_A 238 VSSDMWSFGCVLAELY 253 (360)
T ss_dssp TTHHHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHH
Confidence 8999999999999874
No 155
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.97 E-value=2.3e-31 Score=289.47 Aligned_cols=204 Identities=33% Similarity=0.495 Sum_probs=170.9
Q ss_pred cCccCHHHHHHHhhccccc------CcccCCccEEEEEEEECCCcEEEEEEEeecc----CCcchHHHHHHHHHHHhcCC
Q 042766 692 FPMVSYAELSKATSEFSSS------NMIGQGRFGTVYKGILGDDEMVVAVKVINLK----QKGASKSFVSECEALRNIRH 761 (914)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h 761 (914)
...+++.++..++.+|... +.||+|+||.||+|++ +++.||||++... .....+.+.+|++++++++|
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 4567889999999998877 8999999999999987 4678999998643 23345789999999999999
Q ss_pred CCcceEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecC
Q 042766 762 RNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGD 841 (914)
Q Consensus 762 ~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrD 841 (914)
|||+++++++.. .+..++||||+++++|.+++.... ....+++..++.++.|++.||+|||++ +|+|||
T Consensus 90 ~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~d 158 (307)
T 2nru_A 90 ENLVELLGFSSD-----GDDLCLVYVYMPNGSLLDRLSCLD---GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRD 158 (307)
T ss_dssp TTBCCEEEEECS-----SSSCEEEEECCTTCBHHHHHHTGG---GCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred CCeEEEEEEEec-----CCceEEEEEecCCCcHHHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCC
Confidence 999999999643 346899999999999999997542 124689999999999999999999999 999999
Q ss_pred CCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh---hhhcccCcccccccccC
Q 042766 842 LKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 842 lkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---~~~~Di~s~g~~~~~~f 914 (914)
|||+||+++.++.+||+|||+++........ .......||+.|+|||++. +.++|+||+||++++|+
T Consensus 159 lkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~ 228 (307)
T 2nru_A 159 IKSANILLDEAFTAKISDFGLARASEKFAQT------VMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEII 228 (307)
T ss_dssp CCGGGEEECTTCCEEECCCTTCEECCSCSSC------EECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHH
T ss_pred CCHHHEEEcCCCcEEEeeccccccccccccc------ccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHH
Confidence 9999999999999999999999865432111 1122357999999999985 47999999999999873
No 156
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.97 E-value=1.3e-31 Score=293.36 Aligned_cols=188 Identities=25% Similarity=0.322 Sum_probs=162.8
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc------chHHHHHHHHHHHhcCCCCcceEEeEeecCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG------ASKSFVSECEALRNIRHRNLIKIITICSSTDFE 777 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 777 (914)
.++|++.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|++++++++||||+++++++..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 86 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN---- 86 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec----
Confidence 46799999999999999999999999999999999754321 35689999999999999999999999643
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC----
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM---- 853 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~---- 853 (914)
....++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 87 -~~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~ 156 (321)
T 2a2a_A 87 -RTDVVLILELVSGGELFDFLAQK------ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIP 156 (321)
T ss_dssp -SSEEEEEECCCCSCBHHHHHHTC------SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSC
T ss_pred -CCEEEEEEEcCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcC
Confidence 34789999999999999999764 3578999999999999999999999 999999999999999888
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.+||+|||+++...... ......||+.|+|||++. +.++|+||+||++|+|+
T Consensus 157 ~~kl~Dfg~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 212 (321)
T 2a2a_A 157 HIKLIDFGLAHEIEDGV---------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 212 (321)
T ss_dssp CEEECCCTTCEECCTTC---------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred CEEEccCccceecCccc---------cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHH
Confidence 79999999998654321 112356999999999985 47899999999999873
No 157
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.97 E-value=4.2e-32 Score=297.64 Aligned_cols=202 Identities=23% Similarity=0.402 Sum_probs=148.5
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcE---EEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEM---VVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFE 777 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 777 (914)
..++|++.+.||+|+||.||+|++..++. .||||+++.. .....+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 34689999999999999999999876664 8999999754 344567899999999999999999999997654321
Q ss_pred C-CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEE
Q 042766 778 G-VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAH 856 (914)
Q Consensus 778 ~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 856 (914)
+ ....++||||+++|+|.+++...........+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEE
Confidence 1 112489999999999999997543222223689999999999999999999999 999999999999999999999
Q ss_pred EecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 857 VGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 857 i~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
|+|||+|+........ .......||+.|+|||++. +.++||||+||++|||
T Consensus 178 l~Dfg~a~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 232 (323)
T 3qup_A 178 VADFGLSRKIYSGDYY------RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEI 232 (323)
T ss_dssp ECCCCC-----------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred Eeeccccccccccccc------cccccccCcccccCchhhcCCCCCCccchhhHHHHHHHH
Confidence 9999999876432211 1122345788999999985 5899999999999986
No 158
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.97 E-value=1.5e-31 Score=290.19 Aligned_cols=194 Identities=26% Similarity=0.404 Sum_probs=160.9
Q ss_pred hcccccCcccCCccEEEEEEE----ECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGI----LGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.+|+..+.||+|+||.||+|+ +..+++.||+|+++... ....+.+.+|++++++++||||+++++++.... .
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG---G 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC---C
Confidence 468999999999999999999 45688999999997443 344578999999999999999999999976432 3
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 169 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNK-----NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGD 169 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHT-----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred ceEEEEEEeCCCCcHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECc
Confidence 45789999999999999996543 4689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++......... .......||+.|+|||++. +.++|+||+||++++|+
T Consensus 170 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 223 (302)
T 4e5w_A 170 FGLTKAIETDKEYY-----TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223 (302)
T ss_dssp CTTCEECCTTCCEE-----ECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCcce-----eccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHH
Confidence 99998765432110 1122356899999999985 47899999999999873
No 159
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.97 E-value=1.3e-31 Score=288.28 Aligned_cols=184 Identities=27% Similarity=0.445 Sum_probs=157.6
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcc-------hHHHHHHHHHHHhcCCCCcceEEeEeecCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGA-------SKSFVSECEALRNIRHRNLIKIITICSSTDFE 777 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 777 (914)
++|++.+.||+|+||.||+|++..+++.||+|++....... .+.+.+|++++++++||||+++++++...
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 95 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--- 95 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT---
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC---
Confidence 68999999999999999999999999999999996443221 26789999999999999999999986432
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC--cEecCCCCCCeeecCCCc-
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPP--MVHGDLKPSNVLLDYDMV- 854 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~--ivHrDlkp~NILl~~~~~- 854 (914)
.++||||+++|+|.+++.... ..+++..++.++.|++.|++|||++ + |+||||||+||+++.++.
T Consensus 96 ----~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~ 163 (287)
T 4f0f_A 96 ----PRMVMEFVPCGDLYHRLLDKA-----HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDEN 163 (287)
T ss_dssp ----TEEEEECCTTCBHHHHHHCTT-----SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTT
T ss_pred ----CeEEEEecCCCCHHHHHhccc-----CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCC
Confidence 269999999999999887653 4689999999999999999999998 7 999999999999988776
Q ss_pred ----EEEecccccccccccccccccCCCCccccccCcccccccchh------hhhhcccCcccccccccC
Q 042766 855 ----AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF------FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ----~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~------~~~~~Di~s~g~~~~~~f 914 (914)
+||+|||+|+..... .....||+.|+|||++ ++.++|+||+||++|+|+
T Consensus 164 ~~~~~kl~Dfg~~~~~~~~-----------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~ 222 (287)
T 4f0f_A 164 APVCAKVADFGLSQQSVHS-----------VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL 222 (287)
T ss_dssp CSCCEEECCCTTCBCCSSC-----------EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHH
T ss_pred CceeEEeCCCCcccccccc-----------ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHH
Confidence 999999999743221 1235799999999998 257899999999999873
No 160
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.97 E-value=1.7e-31 Score=296.41 Aligned_cols=198 Identities=25% Similarity=0.383 Sum_probs=163.2
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC---CC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDF---EG 778 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~~ 778 (914)
.++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++..... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 368999999999999999999999999999999986443 3335678899999999999999999999765431 11
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
....++||||+++ ++.+.+.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 166 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVL-----VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLA 166 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred CceEEEEEeccCC-CHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEc
Confidence 3468999999975 8888776543 4689999999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|||+|+.+...... .........||+.|+|||++. +.++||||+||++|+|+
T Consensus 167 Dfg~a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 223 (351)
T 3mi9_A 167 DFGLARAFSLAKNS----QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 223 (351)
T ss_dssp CCTTCEECCCCSSS----SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHH
T ss_pred cchhcccccccccc----cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHH
Confidence 99999876532211 112223467999999999884 57899999999999873
No 161
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.97 E-value=5.8e-32 Score=296.62 Aligned_cols=190 Identities=26% Similarity=0.395 Sum_probs=156.6
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEE----EEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMV----VAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
++|++.+.||+|+||.||+|++..+++. ||+|.+.... ....+.+.+|+.++++++||||+++++++..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 86 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG------ 86 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB------
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC------
Confidence 5789999999999999999999877765 7777775332 3334567889999999999999999998632
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++|+|.+++...+ ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 87 ~~~~~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~D 158 (325)
T 3kex_A 87 SSLQLVTQYLPLGSLLDHVRQHR-----GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVAD 158 (325)
T ss_dssp SSEEEEEECCTTCBSHHHHHSSG-----GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECS
T ss_pred CccEEEEEeCCCCCHHHHHHHcc-----ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECC
Confidence 35789999999999999997643 4688889999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+|+........ .......||+.|+|||++. +.++|+||+||++|+|+
T Consensus 159 fg~a~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 211 (325)
T 3kex_A 159 FGVADLLPPDDKQ------LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 211 (325)
T ss_dssp CSGGGGSCCCTTC------CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred CCcccccCccccc------ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHH
Confidence 9999876543211 1122356888999999995 58999999999999863
No 162
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1e-31 Score=291.98 Aligned_cols=254 Identities=19% Similarity=0.239 Sum_probs=193.8
Q ss_pred CCCCccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCC--Cc
Q 042766 63 NFCQWTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFS--GT 140 (914)
Q Consensus 63 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~ 140 (914)
..|.|.+|.|+.. +++ .+|..+. ++|++|+|++|+++...+..|+++++|++|+|++|+++ +.
T Consensus 5 C~C~~~~l~c~~~------------~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 69 (306)
T 2z66_A 5 CSCSGTEIRCNSK------------GLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGC 69 (306)
T ss_dssp CEEETTEEECCSS------------CCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEE
T ss_pred CeeCCCEEEcCCC------------Ccc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccC
Confidence 4488999988642 232 3444332 68899999999998444445789999999999999987 33
Q ss_pred CCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCC-cccccccccceeecccCCCCCCCCccchh
Q 042766 141 IPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLP-DSVGNLSAIEVIRITENSLGGKIPTTLGL 219 (914)
Q Consensus 141 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 219 (914)
+|..+..+++|++|+|++|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..|..|..
T Consensus 70 ~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 148 (306)
T 2z66_A 70 CSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 148 (306)
T ss_dssp EEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT
T ss_pred cccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc
Confidence 4667778889999999999888 577778888889999999988886554 57888888888888888888888888888
Q ss_pred hhcccccccccccccC-CCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCcccccccccc
Q 042766 220 LRRLVNLNVAENQFSG-MFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLEL 298 (914)
Q Consensus 220 l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 298 (914)
+++|++|++++|++++ ..|..+..+++|++|++++|++++..| ..+..+++|++|+|++|++++..+..+..+++|++
T Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 227 (306)
T 2z66_A 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP-TAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 227 (306)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCE
T ss_pred CcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCH-HHhcCCCCCCEEECCCCccCccChhhccCcccCCE
Confidence 8888888888888876 567778888888888888888876544 34457777888888888777666667777777777
Q ss_pred ccccCccCCccccccccccc-cccceeccCCcCCCC
Q 042766 299 LDLPSNQFKGKVSIDFSSLK-NLWLLNLEQNNLGTG 333 (914)
Q Consensus 299 L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~ 333 (914)
|||++|++++..+..+..++ +|++|+|++|.++..
T Consensus 228 L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 228 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp EECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred eECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 77777777777777777663 677777777776553
No 163
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.97 E-value=8.6e-32 Score=297.77 Aligned_cols=198 Identities=23% Similarity=0.407 Sum_probs=163.0
Q ss_pred HhhcccccCcccCCccEEEEEEEEC-----CCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILG-----DDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDF 776 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 776 (914)
..++|++.+.||+|+||.||+|++. .+++.||||+++... ....+.+.+|++++++++||||+++++++..
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 121 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV--- 121 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS---
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc---
Confidence 4578999999999999999999996 456899999997543 2335678999999999999999999999643
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcc------------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcE
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQV------------------EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMV 838 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~iv 838 (914)
....++||||+++|+|.+++....... ....+++.+++.++.|++.||+|||++ +|+
T Consensus 122 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~iv 196 (343)
T 1luf_A 122 --GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFV 196 (343)
T ss_dssp --SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred --CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 346899999999999999998643110 125689999999999999999999999 999
Q ss_pred ecCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 839 HGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 839 HrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||||||+||+++.++.+||+|||+++........ .......||+.|+|||++. +.++|+||+||++|||+
T Consensus 197 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 270 (343)
T 1luf_A 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYY------KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270 (343)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCB------C----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceEEECCCCeEEEeecCCCcccccCccc------cccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHH
Confidence 9999999999999999999999999866432211 1122356899999999985 58999999999999874
No 164
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=5.9e-32 Score=299.35 Aligned_cols=204 Identities=23% Similarity=0.269 Sum_probs=162.3
Q ss_pred HHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc-----CCcchHHHHHHHHHHHhcCCCCcceEEeEeec
Q 042766 699 ELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK-----QKGASKSFVSECEALRNIRHRNLIKIITICSS 773 (914)
Q Consensus 699 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 773 (914)
++....++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|++++++++||||+++++++..
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 3455677899999999999999999999999999999999643 23455789999999999999999999999644
Q ss_pred CCCCCCceEeEEEecccCCCHHHHHhccCCc----------------------------------ccccCCCHHHHHHHH
Q 042766 774 TDFEGVDFKALVFEYMENGSLEDWLHQSNDQ----------------------------------VEVRKLSLIQRMNIA 819 (914)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------------------------~~~~~~~~~~~~~i~ 819 (914)
....++||||+++|+|.+++...... .....+++..+..++
T Consensus 100 -----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 174 (345)
T 3hko_A 100 -----EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM 174 (345)
T ss_dssp -----SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHH
T ss_pred -----CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHH
Confidence 34789999999999999998631100 001234567788999
Q ss_pred HHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC--cEEEecccccccccccccccccCCCCccccccCcccccccchhh
Q 042766 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM--VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF 897 (914)
Q Consensus 820 ~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~--~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~ 897 (914)
.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+|+.+...... .........||+.|+|||++.
T Consensus 175 ~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~ 247 (345)
T 3hko_A 175 RQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG----EYYGMTTKAGTPYFVAPEVLN 247 (345)
T ss_dssp HHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC------------CCCGGGCCHHHHT
T ss_pred HHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCcc----ccccccccCCCccccCchhhc
Confidence 9999999999999 999999999999998776 8999999999865432111 111123457999999999984
Q ss_pred ------hhhcccCcccccccccC
Q 042766 898 ------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 898 ------~~~~Di~s~g~~~~~~f 914 (914)
+.++||||+||+++||+
T Consensus 248 ~~~~~~~~~~DiwslG~il~el~ 270 (345)
T 3hko_A 248 TTNESYGPKCDAWSAGVLLHLLL 270 (345)
T ss_dssp CSSSCCCTHHHHHHHHHHHHHHH
T ss_pred cCCCCCCcHHHHHHHHHHHHHHH
Confidence 36999999999999873
No 165
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.97 E-value=2.4e-31 Score=286.38 Aligned_cols=190 Identities=22% Similarity=0.338 Sum_probs=160.5
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 779 (914)
..++|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|+..+.++ +||||+++++++...
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~----- 83 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAED----- 83 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEET-----
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecC-----
Confidence 4578999999999999999999999999999999997542 33456788999999999 999999999996543
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC-------
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD------- 852 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~------- 852 (914)
+..++||||+++++|.+++..... ....+++.++..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~ 158 (289)
T 1x8b_A 84 DHMLIQNEYCNGGSLADAISENYR--IMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAAS 158 (289)
T ss_dssp TEEEEEEECCTTCBHHHHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------
T ss_pred CeEEEEEEecCCCcHHHHHHhhcc--cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccc
Confidence 478999999999999999975421 114589999999999999999999999 99999999999999844
Q ss_pred ------------CcEEEecccccccccccccccccCCCCccccccCcccccccchhhh-----hhcccCcccccccccC
Q 042766 853 ------------MVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM-----LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 853 ------------~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~-----~~~Di~s~g~~~~~~f 914 (914)
..+||+|||.++...... ...||+.|+|||++.+ .++||||+||++++|+
T Consensus 159 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~ 225 (289)
T 1x8b_A 159 EEGDEDDWASNKVMFKIGDLGHVTRISSPQ------------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAA 225 (289)
T ss_dssp -----------CCCEEECCCTTCEETTCSC------------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHT
T ss_pred cccccccccCCceEEEEcccccccccCCcc------------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHh
Confidence 479999999998654211 2359999999999853 6899999999999874
No 166
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.97 E-value=3.1e-31 Score=295.33 Aligned_cols=193 Identities=26% Similarity=0.388 Sum_probs=164.8
Q ss_pred HHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc--------chHHHHHHHHHHHhc-CCCCcceEEe
Q 042766 699 ELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG--------ASKSFVSECEALRNI-RHRNLIKIIT 769 (914)
Q Consensus 699 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~l~~ 769 (914)
......++|++.+.||+|+||.||+|++..+|+.||||+++..... ..+.+.+|+++++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 3345567899999999999999999999989999999999754321 135678999999999 7999999999
Q ss_pred EeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee
Q 042766 770 ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 849 (914)
Q Consensus 770 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl 849 (914)
++.. ....++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||++
T Consensus 168 ~~~~-----~~~~~lv~e~~~g~~L~~~l~~~------~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~ 233 (365)
T 2y7j_A 168 SYES-----SSFMFLVFDLMRKGELFDYLTEK------VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILL 233 (365)
T ss_dssp EEEB-----SSEEEEEECCCTTCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred EEee-----CCEEEEEEEeCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 8644 34789999999999999999754 4689999999999999999999999 99999999999999
Q ss_pred cCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----------hhhcccCcccccccccC
Q 042766 850 DYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 850 ~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----------~~~~Di~s~g~~~~~~f 914 (914)
+.++.+||+|||+++.+.... ......||+.|+|||++. +.++||||+||++|+|+
T Consensus 234 ~~~~~ikl~DfG~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell 299 (365)
T 2y7j_A 234 DDNMQIRLSDFGFSCHLEPGE---------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL 299 (365)
T ss_dssp CTTCCEEECCCTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEecCcccccCCCc---------ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHH
Confidence 999999999999998654321 112357999999999985 35899999999999874
No 167
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.97 E-value=1.5e-31 Score=287.45 Aligned_cols=191 Identities=26% Similarity=0.344 Sum_probs=159.5
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. ....+
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~~ 96 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED-----YHNMY 96 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SSEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec-----CCeEE
Confidence 57999999999999999999999999999999997543 3456789999999999999999999999643 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee---cCCCcEEEecc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDF 860 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl---~~~~~~ki~DF 860 (914)
+||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+||
T Consensus 97 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Df 171 (285)
T 3is5_A 97 IVMETCEGGELLERIVSAQA--RGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDF 171 (285)
T ss_dssp EEECCCSCCBHHHHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EEEEeCCCCcHHHHHHhhhh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEee
Confidence 99999999999998864321 124689999999999999999999999 99999999999999 45688999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh---hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---~~~~Di~s~g~~~~~~f 914 (914)
|+|+...... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 172 g~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll 219 (285)
T 3is5_A 172 GLAELFKSDE---------HSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLL 219 (285)
T ss_dssp CCCCC-------------------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred ecceecCCcc---------cCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHH
Confidence 9998654321 112357999999999985 58999999999999873
No 168
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.97 E-value=2.1e-31 Score=297.08 Aligned_cols=195 Identities=25% Similarity=0.329 Sum_probs=165.8
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
..+|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.....+.....
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 358999999999999999999999999999999997433 2334678999999999999999999999876665555678
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||++ |+|.+++.. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 106 ~iv~e~~~-~~L~~~l~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKT-------QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp EEEEECCS-EEHHHHHHH-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEcccC-cCHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcc
Confidence 99999996 599999865 3588999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+........ .......+||+.|+|||++. +.++||||+||++|+|+
T Consensus 175 a~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 226 (364)
T 3qyz_A 175 ARVADPDHDH-----TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226 (364)
T ss_dssp CEECCGGGCB-----CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHH
T ss_pred eEecCCCCCc-----cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHH
Confidence 9876532211 11122457999999999873 57899999999999873
No 169
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.97 E-value=1.5e-31 Score=286.55 Aligned_cols=190 Identities=25% Similarity=0.429 Sum_probs=148.6
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 84 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED-----SN 84 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC-----SS
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc-----CC
Confidence 468999999999999999999998899999999996432 2345788999999999999999999999644 34
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++++|.+++.... ..+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~df 156 (278)
T 3cok_A 85 YVYLVLEMCHNGEMNRYLKNRV-----KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADF 156 (278)
T ss_dssp EEEEEEECCTTEEHHHHHHTCS-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEecCCCCcHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEee
Confidence 7899999999999999998643 4689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++....... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 157 g~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 206 (278)
T 3cok_A 157 GLATQLKMPHE--------KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLL 206 (278)
T ss_dssp TTCEECC------------------------------------CTHHHHHHHHHHHHH
T ss_pred cceeeccCCCC--------cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHH
Confidence 99986542211 112357999999999984 47999999999999873
No 170
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.97 E-value=6.4e-32 Score=296.73 Aligned_cols=192 Identities=25% Similarity=0.420 Sum_probs=153.3
Q ss_pred HHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCC
Q 042766 700 LSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFE 777 (914)
Q Consensus 700 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 777 (914)
.....++|++.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++..
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 104 (329)
T 3gbz_A 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH---- 104 (329)
T ss_dssp ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE----
T ss_pred cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec----
Confidence 3455678999999999999999999999999999999996443 2234577899999999999999999999654
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec-----CC
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD-----YD 852 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~-----~~ 852 (914)
....++||||++ |+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++ .+
T Consensus 105 -~~~~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 173 (329)
T 3gbz_A 105 -NHRLHLIFEYAE-NDLKKYMDKN------PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASET 173 (329)
T ss_dssp -TTEEEEEEECCS-EEHHHHHHHC------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----C
T ss_pred -CCEEEEEEecCC-CCHHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCcc
Confidence 347899999997 5999999765 3588999999999999999999999 999999999999994 45
Q ss_pred CcEEEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 853 MVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 853 ~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+.+||+|||+|+...... .......||+.|+|||++. +.++||||+||++|||+
T Consensus 174 ~~~kl~Dfg~a~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 232 (329)
T 3gbz_A 174 PVLKIGDFGLARAFGIPI--------RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232 (329)
T ss_dssp CEEEECCTTHHHHHC-------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred ceEEECcCCCccccCCcc--------cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHH
Confidence 569999999998654321 1122356899999999984 57899999999999873
No 171
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.97 E-value=1.3e-31 Score=291.20 Aligned_cols=188 Identities=30% Similarity=0.462 Sum_probs=154.0
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|.+.+.||+|+||.||+|++.. .+|+|+++... ....+.+.+|++++++++||||+++++++.. +.
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~~ 105 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------DN 105 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred ccceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc------Cc
Confidence 3678999999999999999998753 48888886433 2344688999999999999999999998532 24
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++++|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 106 ~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg 177 (307)
T 3lb7_A 106 LAIVTQWCEGSSLYKHLHVQE-----TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFG 177 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCC
T ss_pred EEEEEecCCCCcHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCC
Confidence 689999999999999997543 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-------hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~f 914 (914)
+|+....... ........||+.|+|||++. +.++||||+||+++||+
T Consensus 178 ~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~ell 231 (307)
T 3lb7_A 178 LATVKSRWSG------SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELM 231 (307)
T ss_dssp SSCC------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHH
T ss_pred Cceecccccc------cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHH
Confidence 9986542111 11122357999999999984 46899999999999873
No 172
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=2.7e-31 Score=293.89 Aligned_cols=198 Identities=24% Similarity=0.408 Sum_probs=160.9
Q ss_pred HhhcccccCcccCCccEEEEEEEE-----CCCcEEEEEEEeecc-CCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGIL-----GDDEMVVAVKVINLK-QKGASKSFVSECEALRNI-RHRNLIKIITICSSTD 775 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 775 (914)
..++|++.+.||+|+||.||+|++ ..+++.||||+++.. .....+.+.+|+++++++ +||||+++++++..
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-- 120 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL-- 120 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee--
Confidence 457899999999999999999997 346789999999743 234457899999999999 89999999999643
Q ss_pred CCCCceEeEEEecccCCCHHHHHhccCCcc-----------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcE
Q 042766 776 FEGVDFKALVFEYMENGSLEDWLHQSNDQV-----------------EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMV 838 (914)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----------------~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~iv 838 (914)
.+..++||||+++|+|.+++....... ....+++..++.++.|++.||+|||++ +|+
T Consensus 121 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iv 194 (344)
T 1rjb_A 121 ---SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCV 194 (344)
T ss_dssp ---SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ---CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 346899999999999999998653210 113478999999999999999999999 999
Q ss_pred ecCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 839 HGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 839 HrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||||||+||+++.++.+||+|||+++....... ........||+.|+|||++. +.++||||+||++++|+
T Consensus 195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 268 (344)
T 1rjb_A 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSN------YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268 (344)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHT
T ss_pred cCCCChhhEEEcCCCcEEeCCCccCcccccCcc------ceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHH
Confidence 999999999999999999999999986543221 11122356889999999984 58899999999999875
No 173
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.97 E-value=1.8e-31 Score=285.30 Aligned_cols=186 Identities=28% Similarity=0.383 Sum_probs=143.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 87 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-----KDE 87 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SSC
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-----CCe
Confidence 57999999999999999999999999999999996432 3345688999999999999999999999654 347
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+ ++++.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 88 ~~lv~e~~-~~~l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 157 (275)
T 2eue_A 88 IIMVIEYA-GNELFDYIVQR------DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp EEEEEECC-CEEHHHHHHTS------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSS
T ss_pred EEEEehhc-CCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecc
Confidence 89999999 67888888754 3589999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+++...... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 158 ~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~ 206 (275)
T 2eue_A 158 LSNIMTDGN---------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 206 (275)
T ss_dssp CC------------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHH
T ss_pred cceeccCcc---------cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHH
Confidence 998654321 112346999999999984 47899999999999873
No 174
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=9.9e-32 Score=299.43 Aligned_cols=189 Identities=23% Similarity=0.349 Sum_probs=154.9
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCC-CCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTD-FEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~ 780 (914)
.++|+..+.||+|+||.||+|++..+++.||||++.... ....+++.+|++++++++||||+++++++.... .....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 357999999999999999999999999999999985432 233567889999999999999999999976442 12224
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+ +++|.+++.. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-------~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 172 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH-------EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 172 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEecC-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEee
Confidence 569999999 8899999875 3588999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+|+..... ....+||+.|+|||++. +.++|+||+||+++||+
T Consensus 173 g~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 220 (367)
T 1cm8_A 173 GLARQADSE-----------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMI 220 (367)
T ss_dssp TTCEECCSS-----------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHH
T ss_pred ecccccccc-----------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHH
Confidence 999864321 12357999999999984 47899999999999873
No 175
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.97 E-value=1.8e-31 Score=291.27 Aligned_cols=197 Identities=23% Similarity=0.364 Sum_probs=162.6
Q ss_pred hhcccccCcccCCccEEEEEEEE-----CCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGIL-----GDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFE 777 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 777 (914)
.++|.+.+.||+|+||.||+|++ +.+++.||||+++... ....+.+.+|++++++++||||+++++++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---- 97 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ---- 97 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS----
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec----
Confidence 46899999999999999999998 3456899999997443 2344678999999999999999999999643
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcc------------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEe
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQV------------------EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVH 839 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivH 839 (914)
.+..++||||+++|+|.+++....... ....+++.+++.++.|++.||+|||++ +|+|
T Consensus 98 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH 173 (314)
T 2ivs_A 98 -DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVH 173 (314)
T ss_dssp -SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred -CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcc
Confidence 346899999999999999998653210 123488999999999999999999999 9999
Q ss_pred cCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 840 GDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 840 rDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||||+||+++.++.+||+|||+++......... ......||+.|+|||++. +.++||||+||++|||+
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 246 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV------KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSCEE------CSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred cccchheEEEcCCCCEEEccccccccccccccce------eccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999998664322111 112346889999999985 58999999999999873
No 176
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=4.4e-34 Score=340.79 Aligned_cols=459 Identities=16% Similarity=0.114 Sum_probs=246.6
Q ss_pred CCCCccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCC---cccCCcccC------------CCCCC
Q 042766 63 NFCQWTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGF---RGDIPQEIG------------NLFRL 127 (914)
Q Consensus 63 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l---~~~~p~~~~------------~l~~L 127 (914)
-|++|.++.+.. .. .+.+.. .+...++..+..+++|++|+|+++.. .+.+|..++ ++++|
T Consensus 40 vck~W~~~~~~~-~~---~l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L 114 (592)
T 3ogk_B 40 VCRRWFKIDSET-RE---HVTMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQL 114 (592)
T ss_dssp SCHHHHHHHHHH-CC---EEEESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HhHHHHHhhhcc-cc---EEEEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCC
Confidence 455899885422 11 223332 22233344466788899999987532 245555444 57778
Q ss_pred CeeecCCCCCCCcCCCCcccc--CCcchhccCCCc-ccC-CCChhccccccccccccccccccCc----CCccccccccc
Q 042766 128 EKLALSNNSFSGTIPTNLSRC--SNLIHFCASNNK-LEG-QIPKEIGNLLKLQRLSVDINYLTGQ----LPDSVGNLSAI 199 (914)
Q Consensus 128 ~~L~Ls~N~l~~~~p~~l~~l--~~L~~L~Ls~N~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L 199 (914)
++|+|++|.+++..+..++.. .+|++|+|++|. ++. .++....++++|++|+|++|.+++. ++..+.++++|
T Consensus 115 ~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L 194 (592)
T 3ogk_B 115 KSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSL 194 (592)
T ss_dssp CEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCC
T ss_pred CeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCc
Confidence 888888887776666666553 347777777765 211 1222233567777777777777655 33344566777
Q ss_pred ceeecccCCCCC----CCCccchhhhcccccccccccccCCCCCccccccccceeeccCCccc---CcccccccccCccc
Q 042766 200 EVIRITENSLGG----KIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFS---GIFPFDILLNLPNL 272 (914)
Q Consensus 200 ~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~p~~~~~~l~~L 272 (914)
+.|++++|.+++ .++..+.++++|++|++++|.+.+ +|..+..+++|+.|+++.+... +..+ ..+..+++|
T Consensus 195 ~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~-~~l~~~~~L 272 (592)
T 3ogk_B 195 EVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKY-MNLVFPRKL 272 (592)
T ss_dssp CEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSS-SCCCCCTTC
T ss_pred cEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHH-HHhhccccc
Confidence 777777777652 233344556667777777666664 4555666666666666542221 0111 112244555
Q ss_pred ceeeccCccCCCCCCCccccccccccccccCccCCcccc-ccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCc
Q 042766 273 KKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVS-IDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLK 351 (914)
Q Consensus 273 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~ 351 (914)
+.|+++++... .+|..+..+++|++|+|++|.+++... ..+..+++|++|+++ |.+... .++.....+++|+
T Consensus 273 ~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~-----~l~~~~~~~~~L~ 345 (592)
T 3ogk_B 273 CRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDR-----GLEVLAQYCKQLK 345 (592)
T ss_dssp CEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHH-----HHHHHHHHCTTCC
T ss_pred cccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHH-----HHHHHHHhCCCCC
Confidence 55555554222 344455555555555555555443222 123444555555554 222111 0222223344444
Q ss_pred EEeccc---cccCCCcCchhhccccccEEEEeeccccccc-CCccccCCCCCcEEEcccCcccccCChhhhc-ccCCcee
Q 042766 352 VLSLSD---NQFGGELPHSIANLSLKMIELSVGRNQISGT-IPPGIRNLVNLITFTLEVNQFHGTIPDVISE-LKNLQQL 426 (914)
Q Consensus 352 ~L~Ls~---N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L 426 (914)
+|+|++ +..... ..|.+++. ++..+..+++|++|+++.|++++..+..+.. +++|+.|
T Consensus 346 ~L~L~~g~~~~~~~~-----------------~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L 408 (592)
T 3ogk_B 346 RLRIERGADEQGMED-----------------EEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDF 408 (592)
T ss_dssp EEEEECCCCSSTTSS-----------------TTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEE
T ss_pred EEEeecCcccccccc-----------------ccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEE
Confidence 444441 000000 02333322 1122344667777777777776665555554 6777777
Q ss_pred eec----ccccccc-----cCccccCCCCCCeEEeeCC--cCCCCCCCccC-CCCCccccccCCCccCCCCchhhhcccc
Q 042766 427 SVF----NNFLRGG-----IPSGLGNLTKLGSLDLGSN--SLQGNIPSSLG-NCQNLILFIASYNKLTGDLPQQLLSITT 494 (914)
Q Consensus 427 ~L~----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~~~~ 494 (914)
+++ .|.+++. ++..+.++++|++|+|+++ .+++..+..+. .+++|+.|++++|++++.
T Consensus 409 ~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~---------- 478 (592)
T 3ogk_B 409 RLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDE---------- 478 (592)
T ss_dssp EEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHH----------
T ss_pred EEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHH----------
Confidence 775 5566642 2333556777777777643 35544333333 266677777666665521
Q ss_pred hhhhhcccCCccCCCccccccccccceeecccCCccccc-cCccccccccccEEEeecccccccCCcch-hccCCCCEEE
Q 042766 495 LSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGV-IPVTLSTCVSLEYLDISINSFYGVIPLSF-RFLKSIKALN 572 (914)
Q Consensus 495 l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ 572 (914)
.++..+.++++|++|+|++|++++. ++..+..+++|++|+|++|++++.--..+ ..++.+....
T Consensus 479 --------------~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~ 544 (592)
T 3ogk_B 479 --------------GLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIEL 544 (592)
T ss_dssp --------------HHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEE
T ss_pred --------------HHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEE
Confidence 1122334566777777877777654 33334567778888888888765433333 2456665555
Q ss_pred ccCC
Q 042766 573 VSSN 576 (914)
Q Consensus 573 Ls~N 576 (914)
+..+
T Consensus 545 ~~~~ 548 (592)
T 3ogk_B 545 IPSR 548 (592)
T ss_dssp ECCC
T ss_pred ecCc
Confidence 5443
No 177
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.97 E-value=2e-31 Score=290.51 Aligned_cols=188 Identities=23% Similarity=0.347 Sum_probs=156.9
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++.. ....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 77 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-----KRRL 77 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec-----CCeE
Confidence 579999999999999999999999999999999864432 234678899999999999999999999654 3478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 78 ~lv~e~~~~~~l~~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 148 (311)
T 4agu_A 78 HLVFEYCDHTVLHELDRYQ------RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGF 148 (311)
T ss_dssp EEEEECCSEEHHHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEeCCCchHHHHHhhh------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCC
Confidence 9999999999999988754 3589999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+....... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 149 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~ 197 (311)
T 4agu_A 149 ARLLTGPSD--------YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELL 197 (311)
T ss_dssp CEECC--------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHH
T ss_pred chhccCccc--------ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHH
Confidence 987543211 112357999999999984 47899999999999873
No 178
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.97 E-value=1.1e-31 Score=288.08 Aligned_cols=189 Identities=22% Similarity=0.384 Sum_probs=149.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCC---cEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDD---EMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.++|++.+.||+|+||.||+|++..+ +..||+|+++... ....+.+.+|+.++++++||||+++++++..
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 87 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE------ 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS------
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc------
Confidence 46899999999999999999998643 5679999986433 2345678999999999999999999998632
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
+..++||||+++|+|.+++...+ ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 159 (281)
T 1mp8_A 88 NPVWIIMELCTLGELRSFLQVRK-----YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGD 159 (281)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTT-----TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred CccEEEEecCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECc
Confidence 34689999999999999997643 4689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
||+++........ ......||+.|+|||++. +.++|+||+||++|||
T Consensus 160 fg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 210 (281)
T 1mp8_A 160 FGLSRYMEDSTYY-------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 210 (281)
T ss_dssp --------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHH
T ss_pred cccccccCccccc-------ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHH
Confidence 9999876432211 112345788999999985 4789999999999986
No 179
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.97 E-value=9.3e-32 Score=305.10 Aligned_cols=189 Identities=25% Similarity=0.346 Sum_probs=153.4
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--------CcchHHHHHHHHHHHhcCCCCcceEEeEeec
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--------KGASKSFVSECEALRNIRHRNLIKIITICSS 773 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 773 (914)
...++|.+.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34578999999999999999999999999999999997432 1122357899999999999999999998532
Q ss_pred CCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC-
Q 042766 774 TDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD- 852 (914)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~- 852 (914)
...++||||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+|||++.+
T Consensus 212 ------~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~ 276 (419)
T 3i6u_A 212 ------EDYYIVLELMEGGELFDKVVGN------KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQE 276 (419)
T ss_dssp ------SEEEEEEECCTTCBGGGGTSSS------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSS
T ss_pred ------CceEEEEEcCCCCcHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCC
Confidence 2468999999999999988754 4689999999999999999999999 99999999999999754
Q ss_pred --CcEEEecccccccccccccccccCCCCccccccCcccccccchhh-------hhhcccCcccccccccC
Q 042766 853 --MVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 853 --~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~f 914 (914)
+.+||+|||+|+...... .....+||+.|||||++. +.++|+||+||++|+|+
T Consensus 277 ~~~~~kl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~ll 338 (419)
T 3i6u_A 277 EDCLIKITDFGHSKILGETS---------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 338 (419)
T ss_dssp SSCCEEECCSSTTTSCC--------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEeecccceecCCCc---------cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHH
Confidence 459999999998754321 112357999999999973 47999999999999873
No 180
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.97 E-value=2.9e-31 Score=292.28 Aligned_cols=189 Identities=21% Similarity=0.329 Sum_probs=163.6
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.. .+
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~ 114 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-----ND 114 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----CC
Confidence 368999999999999999999999999999999997442 2345678899999999999999999999654 34
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++++|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 115 ~~~lv~e~~~~~~L~~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 185 (335)
T 2owb_A 115 FVFVVLELCRRRSLLELHKRR------KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 185 (335)
T ss_dssp EEEEEECCCTTCBHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEecCCCCCHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeec
Confidence 789999999999999998754 4689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++....... ......||+.|+|||++. +.++|+||+||++|+|+
T Consensus 186 g~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 235 (335)
T 2owb_A 186 GLATKVEYDGE--------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 235 (335)
T ss_dssp TTCEECCSTTC--------CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHH
T ss_pred cCceecccCcc--------cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHH
Confidence 99986542211 122357999999999995 47899999999999874
No 181
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.97 E-value=3.1e-31 Score=287.02 Aligned_cols=194 Identities=19% Similarity=0.281 Sum_probs=162.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+++++++ +|++++++++++.. ....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-----~~~~ 81 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-----GLHN 81 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-----TTEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCC-----Ccee
Confidence 357999999999999999999999999999999986432 335678999999999 79999999998643 3478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc-----EEE
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV-----AHV 857 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~-----~ki 857 (914)
++||||+ +++|.+++...+ ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++. +||
T Consensus 82 ~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl 152 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLCG-----RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYV 152 (298)
T ss_dssp EEEEECC-CCBHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEE
T ss_pred EEEEEec-CCCHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEE
Confidence 9999999 999999998653 4689999999999999999999999 9999999999999987776 999
Q ss_pred ecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+|||+|+......... ...........||+.|+|||++. +.++||||+||++|||+
T Consensus 153 ~Dfg~~~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 212 (298)
T 1csn_A 153 VDFGMVKFYRDPVTKQ-HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFL 212 (298)
T ss_dssp CCCTTCEESBCTTTCC-BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred EECccccccccccccc-cccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHH
Confidence 9999998765432211 11112234567999999999985 58999999999999874
No 182
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1e-31 Score=298.21 Aligned_cols=190 Identities=21% Similarity=0.270 Sum_probs=160.9
Q ss_pred hhcccccCcccCCccEEEEEEEEC---CCcEEEEEEEeeccC----CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILG---DDEMVVAVKVINLKQ----KGASKSFVSECEALRNI-RHRNLIKIITICSSTD 775 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 775 (914)
.++|++.+.||+|+||.||+|++. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 130 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-- 130 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE--
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee--
Confidence 368999999999999999999984 578999999986432 23345677899999999 69999999998644
Q ss_pred CCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcE
Q 042766 776 FEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVA 855 (914)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 855 (914)
....++||||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+
T Consensus 131 ---~~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 198 (355)
T 1vzo_A 131 ---ETKLHLILDYINGGELFTHLSQR------ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHV 198 (355)
T ss_dssp ---TTEEEEEECCCCSCBHHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred ---CceEEEEeecCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcE
Confidence 34789999999999999999764 3688999999999999999999999 99999999999999999999
Q ss_pred EEecccccccccccccccccCCCCccccccCcccccccchhh------hhhcccCcccccccccC
Q 042766 856 HVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 856 ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~~~~~~f 914 (914)
||+|||+++.+..... ......+||+.|+|||++. +.++|||||||++|||+
T Consensus 199 kl~DfG~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell 256 (355)
T 1vzo_A 199 VLTDFGLSKEFVADET-------ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELL 256 (355)
T ss_dssp EESCSSEEEECCGGGG-------GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHH
T ss_pred EEeeCCCCeecccCCC-------CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHH
Confidence 9999999986543221 1122457999999999985 36899999999999873
No 183
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=9.5e-32 Score=297.58 Aligned_cols=191 Identities=28% Similarity=0.444 Sum_probs=155.0
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-----cchHHHHHHHHHHHhcCCCCcceEEeEeecCCC
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-----GASKSFVSECEALRNIRHRNLIKIITICSSTDF 776 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 776 (914)
...++|++.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++++..
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 83 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH--- 83 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC---
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee---
Confidence 345789999999999999999999998999999999964321 123578899999999999999999999643
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEE
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAH 856 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 856 (914)
....++||||+++ +|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 84 --~~~~~lv~e~~~~-~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 152 (346)
T 1ua2_A 84 --KSNISLVFDFMET-DLEVIIKDNS-----LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLK 152 (346)
T ss_dssp --TTCCEEEEECCSE-EHHHHHTTCC-----SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred --CCceEEEEEcCCC-CHHHHHHhcC-----cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEE
Confidence 3478999999976 8999887643 4578888999999999999999999 999999999999999999999
Q ss_pred EecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 857 VGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 857 i~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+|||+|+.+.... .......||+.|+|||++. +.++||||+||++|||+
T Consensus 153 l~Dfg~a~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 207 (346)
T 1ua2_A 153 LADFGLAKSFGSPN--------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207 (346)
T ss_dssp ECCCGGGSTTTSCC--------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHH
T ss_pred EEecccceeccCCc--------ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHH
Confidence 99999998654321 1122357999999999984 47899999999999873
No 184
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.97 E-value=1.8e-31 Score=306.16 Aligned_cols=189 Identities=22% Similarity=0.442 Sum_probs=160.6
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++. ++..||||+++... ...+.+.+|++++++++||||+++++++.. ...+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~------~~~~ 258 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPIY 258 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECS------SSCE
T ss_pred hHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC------CccE
Confidence 467899999999999999999996 46789999997543 456789999999999999999999998642 3578
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++|+|.+++...+ ...+++.+++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|
T Consensus 259 lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a 331 (454)
T 1qcf_A 259 IITEFMAKGSLLDFLKSDE----GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLA 331 (454)
T ss_dssp EEECCCTTCBHHHHHHSHH----HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGG
T ss_pred EEEeecCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCc
Confidence 9999999999999997542 24688899999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+......... .....+|+.|+|||++. +.++|||||||+++||+
T Consensus 332 ~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~ 379 (454)
T 1qcf_A 332 RVIEDNEYTA-------REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 379 (454)
T ss_dssp GGBCCHHHHT-------TCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred eEcCCCceec-------cCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHH
Confidence 8764322111 11245788999999985 58999999999999874
No 185
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.97 E-value=2.4e-31 Score=308.74 Aligned_cols=188 Identities=24% Similarity=0.349 Sum_probs=158.1
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|++.+.||+|+||+||+|+++.+++.||+|+++... ......+.+|++++++++||||+++++++.. ...
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~ 110 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED-----KRN 110 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SSE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----CCE
Confidence 457999999999999999999999999999999997543 3345788999999999999999999999644 347
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC---CcEEEe
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAHVG 858 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~---~~~ki~ 858 (914)
.++||||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.. +.+||+
T Consensus 111 ~~lv~e~~~~g~L~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~ 181 (494)
T 3lij_A 111 YYLVMECYKGGELFDEIIHR------MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIV 181 (494)
T ss_dssp EEEEEECCCSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred EEEEEecCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEE
Confidence 89999999999999988754 4689999999999999999999999 99999999999999764 569999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh---hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---~~~~Di~s~g~~~~~~f 914 (914)
|||+|+...... .....+||+.|+|||++. +.++||||+||++|+|+
T Consensus 182 DfG~a~~~~~~~---------~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll 231 (494)
T 3lij_A 182 DFGLSAVFENQK---------KMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILL 231 (494)
T ss_dssp CCTTCEECBTTB---------CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHH
T ss_pred ECCCCeECCCCc---------cccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHH
Confidence 999998764321 122357999999999984 58999999999999873
No 186
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.97 E-value=3.5e-31 Score=286.13 Aligned_cols=189 Identities=21% Similarity=0.329 Sum_probs=163.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. .+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~ 88 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-----ND 88 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-----CC
Confidence 368999999999999999999999999999999997542 2345678899999999999999999999654 34
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++++|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 159 (294)
T 2rku_A 89 FVFVVLELCRRRSLLELHKRR------KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 159 (294)
T ss_dssp EEEEEEECCTTCBHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEEecCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEec
Confidence 789999999999999998754 4688999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++....... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 160 g~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~ 209 (294)
T 2rku_A 160 GLATKVEYDGE--------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 209 (294)
T ss_dssp TTCEECCSTTC--------CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHH
T ss_pred cCceecccCcc--------ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHH
Confidence 99986542211 122357999999999985 47999999999999873
No 187
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.97 E-value=1.6e-31 Score=291.59 Aligned_cols=208 Identities=24% Similarity=0.411 Sum_probs=157.1
Q ss_pred HHHHHHhhcccccCcccCCccEEEEEEEECC---CcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEee
Q 042766 698 AELSKATSEFSSSNMIGQGRFGTVYKGILGD---DEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICS 772 (914)
Q Consensus 698 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 772 (914)
.++....++|.+.+.||+|+||.||+|++.. +++.||+|+++... ....+.+.+|++++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 3334456789999999999999999998754 56789999997543 233467899999999999999999999987
Q ss_pred cCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC
Q 042766 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD 852 (914)
Q Consensus 773 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~ 852 (914)
..........++||||+++|+|.+++...........+++.+++.++.|++.||.|||++ +|+||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCC
Confidence 654333345699999999999999986443222335789999999999999999999999 99999999999999999
Q ss_pred CcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 853 MVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 853 ~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+.+||+|||+++........ .......||+.|+|||++. +.++|+||+||++|+|+
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 243 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYY------RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA 243 (313)
T ss_dssp SCEEECSCSCC----------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHH
T ss_pred CcEEEeecCcceeccccccc------CcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHH
Confidence 99999999999866432211 1112346889999999995 57899999999999873
No 188
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.97 E-value=1.9e-31 Score=286.61 Aligned_cols=192 Identities=23% Similarity=0.421 Sum_probs=162.9
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC------
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDF------ 776 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 776 (914)
...+|+..+.||+|+||.||+|++..+++.||+|+++... +.+.+|++++++++||||+++++++....+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4468999999999999999999999899999999997443 356789999999999999999998754211
Q ss_pred -----CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC
Q 042766 777 -----EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY 851 (914)
Q Consensus 777 -----~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~ 851 (914)
......++||||+++|+|.+++.... ...+++..++.++.|++.|+.|||++ +|+||||||+||+++.
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR----GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVD 157 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGG----GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhcc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcC
Confidence 12345799999999999999997542 24689999999999999999999999 9999999999999999
Q ss_pred CCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 852 DMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 852 ~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++.+||+|||+++...... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 215 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDG---------KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215 (284)
T ss_dssp TTEEEECCCTTCEESSCCS---------CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHH
T ss_pred CCCEEECcchhheeccccc---------cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHH
Confidence 9999999999998764321 112346999999999985 57899999999999873
No 189
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.97 E-value=2.6e-31 Score=307.97 Aligned_cols=189 Identities=28% Similarity=0.360 Sum_probs=162.0
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc--CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK--QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
..++|++.+.||+|+||+||+|++..+++.||||++... .......+.+|++++++++||||+++++++.. ..
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~ 94 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-----SS 94 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc-----CC
Confidence 346899999999999999999999999999999999643 23456788999999999999999999999644 44
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec---CCCcEEE
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---YDMVAHV 857 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~---~~~~~ki 857 (914)
..++||||+++|+|.+++... ..+++.++..++.|++.||.|||++ +|+||||||+||+++ .++.+||
T Consensus 95 ~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 165 (486)
T 3mwu_A 95 SFYIVGELYTGGELFDEIIKR------KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKI 165 (486)
T ss_dssp EEEEEECCCCSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEE
T ss_pred EEEEEEEcCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEE
Confidence 789999999999999988754 4689999999999999999999999 999999999999995 4568999
Q ss_pred ecccccccccccccccccCCCCccccccCcccccccchhh---hhhcccCcccccccccC
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---~~~~Di~s~g~~~~~~f 914 (914)
+|||+|+...... .....+||+.|+|||++. +.++||||+||++|+|+
T Consensus 166 ~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll 216 (486)
T 3mwu_A 166 IDFGLSTCFQQNT---------KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILL 216 (486)
T ss_dssp CSCSCTTTBCCC-------------CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHH
T ss_pred EECCcCeECCCCC---------ccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHH
Confidence 9999998654321 112357999999999995 48899999999999873
No 190
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.97 E-value=2.2e-31 Score=288.80 Aligned_cols=203 Identities=24% Similarity=0.321 Sum_probs=159.9
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCC-------
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTD------- 775 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 775 (914)
..++|++.+.||+|+||.||+|++..+++.||||+++.. ....+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 356899999999999999999999989999999999643 334567899999999999999999999875421
Q ss_pred -CCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc
Q 042766 776 -FEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV 854 (914)
Q Consensus 776 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~ 854 (914)
.+.....++||||+++|+|.+++.... ..+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSEN-----LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSC-----GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccc-----cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 123457899999999999999998643 4678889999999999999999999 9999999999999999999
Q ss_pred EEEeccccccccccccccc------ccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 855 AHVGDFGLAKFLSNHHLDI------ASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~------~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+||+|||+++......... ............||+.|+|||++. +.++|+||+||++|+|+
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~ 225 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHH
Confidence 9999999998654321000 000011223457999999999984 47899999999999873
No 191
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.97 E-value=5.4e-32 Score=291.53 Aligned_cols=192 Identities=24% Similarity=0.489 Sum_probs=165.1
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
..++|++.+.||+|+||.||+|++..+++.||+|++... ....+.+.+|++++++++||||+++++++.. ....
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 84 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-----EPPF 84 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----SSSE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-----CCCE
Confidence 457899999999999999999999989999999999643 3456789999999999999999999999643 3468
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++++|.+++..... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~ 157 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL 157 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCCT----TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCG
T ss_pred EEEEEcCCCCcHHHHHHhccc----CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCcc
Confidence 999999999999999986432 4689999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++....... .......||+.|+|||++. +.++|+||+||++++|+
T Consensus 158 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll 206 (288)
T 3kfa_A 158 SRLMTGDTY-------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206 (288)
T ss_dssp GGTSCSSSS-------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ceeccCCcc-------ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHH
Confidence 986543221 1222356788999999985 57999999999999873
No 192
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.97 E-value=1.7e-31 Score=286.15 Aligned_cols=188 Identities=23% Similarity=0.380 Sum_probs=160.1
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
+.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. .
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 81 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-----A 81 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----S
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec-----C
Confidence 3468999999999999999999999999999999986432 2345678999999999999999999999643 3
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~------~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~D 152 (279)
T 3fdn_A 82 TRVYLILEYAPLGTVYRELQKL------SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIAD 152 (279)
T ss_dssp SEEEEEECCCTTEEHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECS
T ss_pred CEEEEEEecCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEe
Confidence 4789999999999999999764 3688999999999999999999998 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||++...... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 153 fg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 201 (279)
T 3fdn_A 153 FGWSVHAPSS----------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 201 (279)
T ss_dssp CCEESCC------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred ccccccCCcc----------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHH
Confidence 9998654321 112357999999999985 47899999999999873
No 193
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.97 E-value=3.5e-31 Score=297.11 Aligned_cols=197 Identities=25% Similarity=0.389 Sum_probs=162.4
Q ss_pred hhcccccCcccCCccEEEEEEEEC-------CCcEEEEEEEeeccC-CcchHHHHHHHHHHHhc-CCCCcceEEeEeecC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILG-------DDEMVVAVKVINLKQ-KGASKSFVSECEALRNI-RHRNLIKIITICSST 774 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 774 (914)
.++|.+.+.||+|+||.||+|++. ..+..||||+++... ....+++.+|+++++++ +||||+++++++..
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~- 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc-
Confidence 368999999999999999999974 344689999997543 23346789999999999 89999999999643
Q ss_pred CCCCCceEeEEEecccCCCHHHHHhccCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCC
Q 042766 775 DFEGVDFKALVFEYMENGSLEDWLHQSNDQ----------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKP 844 (914)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp 844 (914)
.+..++||||+++|+|.+++...... .....+++.+++.++.|++.||+|||+. +|+||||||
T Consensus 147 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 219 (382)
T 3tt0_A 147 ----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 219 (382)
T ss_dssp ----SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred ----CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCc
Confidence 34689999999999999999865321 1124589999999999999999999999 999999999
Q ss_pred CCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 845 SNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 845 ~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+||+++.++.+||+|||+|+........ .......||+.|+|||++. +.++||||+||++++|+
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ell 287 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDYY------KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 287 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCTT------CCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHH
T ss_pred ceEEEcCCCcEEEcccCccccccccccc------ccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHH
Confidence 9999999999999999999866432211 1122346899999999985 57999999999999873
No 194
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=9e-32 Score=299.95 Aligned_cols=194 Identities=25% Similarity=0.445 Sum_probs=150.1
Q ss_pred hcccccCcccCCccEEEEEEEECCC---cEEEEEEEeecc-CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDD---EMVVAVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
..|+..+.||+|+||.||+|++..+ +..||||.++.. .....+++.+|+.++++++||||++++++|.. ..+
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~----~~~ 164 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SEG 164 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECC----CSS
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEc----CCC
Confidence 3577788999999999999997432 357899998643 33455789999999999999999999998743 234
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 165 ~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DF 236 (373)
T 3c1x_A 165 SPLVVLPYMKHGDLRNFIRNET-----HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADF 236 (373)
T ss_dssp CCEEEEECCTTCBHHHHHHCTT-----CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred CeEEEEECCCCCCHHHHHhhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeec
Confidence 6789999999999999997653 4578889999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+|+......... ........||+.|+|||++. +.++|||||||++|||+
T Consensus 237 G~a~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ell 290 (373)
T 3c1x_A 237 GLARDMYDKEFDS----VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 290 (373)
T ss_dssp -------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccc----ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHH
Confidence 9998664332111 11223456889999999985 58999999999999874
No 195
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.97 E-value=3.7e-31 Score=303.13 Aligned_cols=185 Identities=31% Similarity=0.417 Sum_probs=157.7
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++. ++.||||+++... ..+.+.+|++++++++||||+++++++... ....+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~~~ 263 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGGLY 263 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECT----TSCEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcC----CCceE
Confidence 467899999999999999999985 6789999996433 557899999999999999999999997543 23689
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++|+|.+++...+. ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|
T Consensus 264 iv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a 336 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 336 (450)
T ss_dssp EEEECCTTCBHHHHHHHHCT----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCc
Confidence 99999999999999986532 3478899999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+...... ....+|+.|+|||++. +.++|||||||+++||+
T Consensus 337 ~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~ 380 (450)
T 1k9a_A 337 KEASSTQ-----------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 380 (450)
T ss_dssp EECC-----------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccc-----------cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHH
Confidence 8542110 1235789999999994 58999999999999874
No 196
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.97 E-value=4.2e-31 Score=283.92 Aligned_cols=188 Identities=23% Similarity=0.356 Sum_probs=161.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 79 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-----ESF 79 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SSE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-----CCE
Confidence 468999999999999999999999999999999997543 2334678899999999999999999999643 347
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc---EEEe
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV---AHVG 858 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~---~ki~ 858 (914)
.++||||+++++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++. +||+
T Consensus 80 ~~~v~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~ 150 (284)
T 3kk8_A 80 HYLVFDLVTGGELFEDIVAR------EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLA 150 (284)
T ss_dssp EEEEECCCCSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEEC
T ss_pred EEEEEecCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEe
Confidence 89999999999999988754 4689999999999999999999999 9999999999999987655 9999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||+++...... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 151 Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~ 201 (284)
T 3kk8_A 151 DFGLAIEVNDSE---------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 201 (284)
T ss_dssp CCTTCEECCSSC---------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred eceeeEEcccCc---------cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHH
Confidence 999997654321 112357999999999985 47899999999999873
No 197
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.97 E-value=3.8e-31 Score=282.97 Aligned_cols=192 Identities=22% Similarity=0.317 Sum_probs=164.3
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
..++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 79 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-----GNI 79 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-----CCE
Confidence 4578999999999999999999999899999999997543 3445788999999999999999999999654 347
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++++|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 150 (276)
T 2yex_A 80 QYLFLEYCSGGELFDRIEPD------IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFG 150 (276)
T ss_dssp EEEEEECCTTEEGGGGSBTT------TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EEEEEEecCCCcHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCC
Confidence 89999999999999988653 4688999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
.++........ .......||+.|+|||++. +.++|+||+||++++|+
T Consensus 151 ~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~ 202 (276)
T 2yex_A 151 LATVFRYNNRE------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202 (276)
T ss_dssp TCEECEETTEE------CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHH
T ss_pred CccccCCCcch------hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHH
Confidence 99865432111 1112357999999999984 46899999999999874
No 198
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.97 E-value=4.6e-31 Score=284.54 Aligned_cols=190 Identities=24% Similarity=0.377 Sum_probs=162.1
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
..|.+.+.||+|+||.||+|++..++..||+|++.... ....+.+.+|++++++++||||+++++++.... ......
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES-SSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc-CCCceE
Confidence 35788889999999999999999999999999997443 334567899999999999999999999875432 334578
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC--cEecCCCCCCeeec-CCCcEEEec
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPP--MVHGDLKPSNVLLD-YDMVAHVGD 859 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~--ivHrDlkp~NILl~-~~~~~ki~D 859 (914)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. + |+||||||+||+++ .++.+||+|
T Consensus 105 ~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~D 175 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRF------KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGD 175 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECC
T ss_pred EEEEEecCCCCHHHHHHHc------cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEee
Confidence 9999999999999999764 4688999999999999999999998 7 99999999999998 789999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh---hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---~~~~Di~s~g~~~~~~f 914 (914)
||+++..... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 176 fg~~~~~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~ 223 (290)
T 1t4h_A 176 LGLATLKRAS----------FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMA 223 (290)
T ss_dssp TTGGGGCCTT----------SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHH
T ss_pred CCCccccccc----------ccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHH
Confidence 9999754321 112356999999999985 58999999999999873
No 199
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.97 E-value=7.1e-32 Score=295.69 Aligned_cols=188 Identities=24% Similarity=0.398 Sum_probs=153.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
++|++.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|++++++++||||+++++++.. ....+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-----EKSLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEEC-----SSCEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEee-----CCEEE
Confidence 579999999999999999999999999999999964432 222345679999999999999999999654 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||++ |+|.+++...+ ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 77 lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 147 (324)
T 3mtl_A 77 LVFEYLD-KDLKQYLDDCG-----NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLA 147 (324)
T ss_dssp EEEECCS-EEHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEE
T ss_pred EEecccc-cCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCccc
Confidence 9999997 59999987653 4688999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+...... .......||+.|+|||++. +.++||||+||++|+|+
T Consensus 148 ~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~ 195 (324)
T 3mtl_A 148 RAKSIPT--------KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMA 195 (324)
T ss_dssp ECC--------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred ccccCCc--------cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHH
Confidence 8643221 1122357899999999984 47899999999999873
No 200
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.97 E-value=3.5e-31 Score=286.66 Aligned_cols=194 Identities=25% Similarity=0.437 Sum_probs=158.8
Q ss_pred hhcccccCcccCCccEEEEEEEECCC---cEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDD---EMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
..+|++.+.||+|+||.||+|++..+ ...||+|.+.... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~ 99 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SE 99 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC----SS
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEc----CC
Confidence 35788899999999999999997543 3468999986433 3345678999999999999999999998643 23
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 100 ~~~~~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 171 (298)
T 3f66_A 100 GSPLVVLPYMKHGDLRNFIRNET-----HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVAD 171 (298)
T ss_dssp SCCEEEEECCTTCBHHHHHHCTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECS
T ss_pred CceEEEEeCCCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECc
Confidence 46789999999999999997643 4678999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
||+|+........ .........||+.|+|||++. +.++|+||+||++++|
T Consensus 172 fg~a~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 225 (298)
T 3f66_A 172 FGLARDMYDKEYY----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 225 (298)
T ss_dssp CGGGCCCSCGGGC----BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ccccccccccchh----ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHH
Confidence 9999876543221 111223457899999999995 4889999999999986
No 201
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.97 E-value=4.7e-31 Score=289.56 Aligned_cols=195 Identities=25% Similarity=0.414 Sum_probs=163.6
Q ss_pred hhcccccCcccCCccEEEEEEEE----CCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGIL----GDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.++|++.+.||+|+||.||+|++ ..+++.||||++........+.+.+|++++++++||||+++++++.... .
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---R 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC---C
Confidence 35789999999999999999994 5678999999997666666678999999999999999999999865322 2
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++++|.+++...+ ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~D 188 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHK-----ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 188 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHST-----TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECC
T ss_pred CceEEEEECCCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEec
Confidence 35789999999999999998653 3589999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++.......... ......||+.|+|||++. +.++||||+||+++||+
T Consensus 189 fg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 242 (326)
T 2w1i_A 189 FGLTKVLPQDKEYYK-----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 242 (326)
T ss_dssp CTTCEECCSSCSEEE-----CSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH
T ss_pred Ccchhhccccccccc-----cccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHH
Confidence 999987653221100 112345888999999985 58999999999999874
No 202
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.97 E-value=3.2e-31 Score=289.18 Aligned_cols=197 Identities=24% Similarity=0.389 Sum_probs=162.8
Q ss_pred hhcccccCcccCCccEEEEEEEE-----CCCcEEEEEEEeeccCC-cchHHHHHHHHHHHhc-CCCCcceEEeEeecCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGIL-----GDDEMVVAVKVINLKQK-GASKSFVSECEALRNI-RHRNLIKIITICSSTDF 776 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 776 (914)
.++|++.+.||+|+||.||+|++ ..+++.||||+++.... ...+.+.+|+++++++ +||||+++++++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~--- 98 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI--- 98 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec---
Confidence 46899999999999999999985 45788999999975432 3457889999999999 99999999999643
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCc------------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCC
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQ------------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKP 844 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp 844 (914)
.+..++||||+++|+|.+++...... .....+++.+++.++.|++.||+|||++ +|+||||||
T Consensus 99 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp 173 (313)
T 1t46_A 99 --GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAA 173 (313)
T ss_dssp --SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred --CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCcc
Confidence 34679999999999999999865321 1123589999999999999999999999 999999999
Q ss_pred CCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 845 SNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 845 ~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+||+++.++.+||+|||+++........ .......||+.|+|||++. +.++||||+||++++|+
T Consensus 174 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell 241 (313)
T 1t46_A 174 RNILLTHGRITKICDFGLARDIKNDSNY------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241 (313)
T ss_dssp GGEEEETTTEEEECCCGGGSCTTSCTTS------EECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ceEEEcCCCCEEEccccccccccccccc------eeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHH
Confidence 9999999999999999999876432211 1112346889999999984 58899999999999873
No 203
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.97 E-value=2.7e-31 Score=307.97 Aligned_cols=188 Identities=27% Similarity=0.369 Sum_probs=163.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~ 99 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED-----KG 99 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SS
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----CC
Confidence 458999999999999999999999999999999996442 3456789999999999999999999999644 45
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee---cCCCcEEE
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHV 857 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl---~~~~~~ki 857 (914)
..++||||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||++ +.++.+||
T Consensus 100 ~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 170 (484)
T 3nyv_A 100 YFYLVGEVYTGGELFDEIISR------KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRI 170 (484)
T ss_dssp EEEEEECCCCSCBHHHHHHTC------SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEE
T ss_pred EEEEEEecCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEE
Confidence 889999999999999998765 3688999999999999999999999 99999999999999 46789999
Q ss_pred ecccccccccccccccccCCCCccccccCcccccccchhh---hhhcccCcccccccccC
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---~~~~Di~s~g~~~~~~f 914 (914)
+|||+|+.+.... .....+||+.|+|||++. +.++||||+||++|+|+
T Consensus 171 ~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll 221 (484)
T 3nyv_A 171 IDFGLSTHFEASK---------KMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILL 221 (484)
T ss_dssp CCTTHHHHBCCCC---------SHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHH
T ss_pred EeeeeeEEccccc---------ccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHH
Confidence 9999998654321 122457999999999985 58899999999999873
No 204
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.97 E-value=4.4e-31 Score=293.34 Aligned_cols=200 Identities=25% Similarity=0.359 Sum_probs=164.1
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++....++.....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 368999999999999999999999999999999996433 2334678899999999999999999999876666666788
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||++ ++|.+++.. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 90 ~lv~e~~~-~~L~~~~~~-------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST-------QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp EEEECCCS-EEHHHHHHH-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEeccC-ccHHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 99999996 699999875 3588999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccc--cCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIA--SKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~--~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+.......... ...........||+.|+|||++. +.++|+||+||++++|+
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~ 217 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHH
Confidence 987654321111 01111123457999999999874 47899999999999873
No 205
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.97 E-value=5.2e-31 Score=306.79 Aligned_cols=189 Identities=26% Similarity=0.360 Sum_probs=160.4
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-------------cchHHHHHHHHHHHhcCCCCcceEEe
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-------------GASKSFVSECEALRNIRHRNLIKIIT 769 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~ 769 (914)
..++|.+.+.||+|+||+||+|+++.+++.||||++..... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 34689999999999999999999999999999999974321 33567899999999999999999999
Q ss_pred EeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee
Q 042766 770 ICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 849 (914)
Q Consensus 770 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl 849 (914)
++.. ....++||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||++
T Consensus 114 ~~~~-----~~~~~lv~e~~~gg~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~ 179 (504)
T 3q5i_A 114 VFED-----KKYFYLVTEFYEGGELFEQIINR------HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILL 179 (504)
T ss_dssp EEEC-----SSEEEEEEECCTTCBHHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred EEEc-----CCEEEEEEecCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEE
Confidence 9643 45789999999999999998754 4689999999999999999999999 99999999999999
Q ss_pred cCCC---cEEEecccccccccccccccccCCCCccccccCcccccccchhh---hhhcccCcccccccccC
Q 042766 850 DYDM---VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 850 ~~~~---~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---~~~~Di~s~g~~~~~~f 914 (914)
+.++ .+||+|||+|+...... .....+||+.|+|||++. +.++||||+||++|+|+
T Consensus 180 ~~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll 241 (504)
T 3q5i_A 180 ENKNSLLNIKIVDFGLSSFFSKDY---------KLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILL 241 (504)
T ss_dssp SSTTCCSSEEECCCTTCEECCTTS---------CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHH
T ss_pred ecCCCCccEEEEECCCCEEcCCCC---------ccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHH
Confidence 8776 69999999998764321 122357999999999985 58999999999999873
No 206
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.97 E-value=6.4e-32 Score=293.17 Aligned_cols=190 Identities=26% Similarity=0.360 Sum_probs=143.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHh--cCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRN--IRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|++.+.||+|+||.||+|++. ++.||||+++.. ....+.+|.+++.. ++||||+++++++.... ......
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~ 76 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQL 76 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT--TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSSEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc--CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCC-Ccccee
Confidence 57999999999999999999874 778999998532 34567788888887 79999999999976443 122368
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCcEecCCCCCCeeecCCCc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH--------HHCQPPMVHGDLKPSNVLLDYDMV 854 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH--------~~~~~~ivHrDlkp~NILl~~~~~ 854 (914)
++||||+++|+|.+++... .+++.+++.++.|++.|++||| +. +|+||||||+||+++.++.
T Consensus 77 ~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~ 146 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGT 146 (303)
T ss_dssp EEEEECCTTCCHHHHHHHC-------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCC
T ss_pred EEEEeccCCCCHHHHHhcc-------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCC
Confidence 9999999999999999653 4677788999999999999999 76 9999999999999999999
Q ss_pred EEEecccccccccccccccccCCCCccccccCcccccccchhhh----------hhcccCcccccccccC
Q 042766 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM----------LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~----------~~~Di~s~g~~~~~~f 914 (914)
+||+|||+|+......... ........||+.|+|||++.+ .++|||||||++|||+
T Consensus 147 ~kl~DFg~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~ 212 (303)
T 3gxj_A 147 CCIADLGLAVRHDSATDTI----DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212 (303)
T ss_dssp C-BCCCCC-CCEETTTTEE----SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTG
T ss_pred EEEeecCcceeccCCCccc----ccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHH
Confidence 9999999997654322111 011223479999999999854 5799999999999984
No 207
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.97 E-value=7.6e-31 Score=281.77 Aligned_cols=188 Identities=24% Similarity=0.323 Sum_probs=160.1
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC------cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK------GASKSFVSECEALRNIRHRNLIKIITICSSTDFE 777 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 777 (914)
.++|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.+|++++++++||||+++++++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---- 79 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN---- 79 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC----
Confidence 3579999999999999999999999999999999975421 235789999999999999999999999654
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC----
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM---- 853 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~---- 853 (914)
....++||||+++++|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 80 -~~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~ 149 (283)
T 3bhy_A 80 -KTDVVLILELVSGGELFDFLAEK------ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNP 149 (283)
T ss_dssp -SSEEEEEEECCCSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSC
T ss_pred -CCeEEEEEeecCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCC
Confidence 34789999999999999999754 4689999999999999999999999 999999999999999877
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.+||+|||+++...... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 150 ~~kl~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 205 (283)
T 3bhy_A 150 RIKLIDFGIAHKIEAGN---------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 205 (283)
T ss_dssp CEEECCCTTCEECC-----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred ceEEEecccceeccCCC---------cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHH
Confidence 89999999998654321 112346999999999985 47899999999999873
No 208
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.97 E-value=3.4e-31 Score=292.96 Aligned_cols=198 Identities=18% Similarity=0.296 Sum_probs=157.3
Q ss_pred hcccccCcccCCccEEEEEEEECC---CcEEEEEEEeeccCCc-----------chHHHHHHHHHHHhcCCCCcceEEeE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGD---DEMVVAVKVINLKQKG-----------ASKSFVSECEALRNIRHRNLIKIITI 770 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~~ 770 (914)
++|++.+.||+|+||.||+|++.. ++..||||++...... ..+.+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 689999999999999999999987 7889999998754321 12356788899999999999999999
Q ss_pred eecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec
Q 042766 771 CSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 850 (914)
Q Consensus 771 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~ 850 (914)
+... ++.....++||||+ +++|.+++... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 117 ~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~ 185 (345)
T 2v62_A 117 GLTE-FKGRSYRFMVMERL-GIDLQKISGQN------GTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLG 185 (345)
T ss_dssp EEEE-SSSCEEEEEEEECE-EEEHHHHCBGG------GBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred cccc-cCCCcEEEEEEecc-CCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEc
Confidence 7653 23456889999999 99999998754 3689999999999999999999999 999999999999999
Q ss_pred CCC--cEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 851 YDM--VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 851 ~~~--~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.++ .+||+|||+|+.+....... ...........||+.|+|||++. +.++|||||||++|||+
T Consensus 186 ~~~~~~~kL~Dfg~a~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell 254 (345)
T 2v62_A 186 YKNPDQVYLADYGLSYRYCPNGNHK-QYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWL 254 (345)
T ss_dssp SSSTTSEEECCCTTCEESSGGGCCC-CCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCcEEEEeCCCceecccccccc-cchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHH
Confidence 887 99999999998765432111 11111223567999999999985 58999999999999873
No 209
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.97 E-value=2e-31 Score=289.23 Aligned_cols=190 Identities=22% Similarity=0.322 Sum_probs=159.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|++++++++||||+++++++... ...+
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 92 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHD-----GKLW 92 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC------CEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeC-----CeEE
Confidence 36899999999999999999999999999999999766666678899999999999999999999996543 4789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++.... ..+++.++..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 93 lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 164 (302)
T 2j7t_A 93 IMIEFCPGGAVDAIMLELD-----RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVS 164 (302)
T ss_dssp EEEECCTTEEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHH
T ss_pred EEEEeCCCCcHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCC
Confidence 9999999999999987543 4689999999999999999999999 9999999999999999999999999998
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~~f 914 (914)
........ ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 165 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~ 216 (302)
T 2j7t_A 165 AKNLKTLQ--------KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 216 (302)
T ss_dssp HHHHHHHH--------C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHH
T ss_pred cccccccc--------ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHh
Confidence 64322110 112346999999999983 46899999999999873
No 210
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.97 E-value=4.6e-31 Score=296.40 Aligned_cols=187 Identities=22% Similarity=0.368 Sum_probs=154.1
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcC--CCCcceEEeEeecCCCCCCc
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIR--HRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~~~ 780 (914)
.+|++.+.||+|+||.||+|++.. ++.||||++.... ....+.+.+|++++++++ ||||+++++++... +
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~-----~ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-----Q 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----S
T ss_pred CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC-----C
Confidence 469999999999999999999875 8899999997543 234568899999999997 59999999986543 4
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||| +.+++|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+|||++ ++.+||+||
T Consensus 130 ~~~lv~E-~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DF 198 (390)
T 2zmd_A 130 YIYMVME-CGNIDLNSWLKKK------KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDF 198 (390)
T ss_dssp EEEEEEE-CCSEEHHHHHHHC------SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCC
T ss_pred EEEEEEe-cCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEec
Confidence 7899999 5588999999865 3678889999999999999999999 999999999999995 589999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh---------------hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------------~~~~Di~s~g~~~~~~f 914 (914)
|+|+.+...... ......+||+.|||||++. +.++||||+||++|||+
T Consensus 199 G~a~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell 261 (390)
T 2zmd_A 199 GIANQMQPDTTS------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261 (390)
T ss_dssp SSSCCC---------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHH
T ss_pred CccccccCCCcc------ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHH
Confidence 999876432211 1112357999999999974 46899999999999873
No 211
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.97 E-value=3.1e-31 Score=288.04 Aligned_cols=187 Identities=26% Similarity=0.334 Sum_probs=159.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|.+.+.||+|+||.||+|++..+++.||+|+++.......+.+.+|++++++++||||+++++++.. ....+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 82 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES-----TTHYY 82 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEEC-----SSEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhccc-----CCEEE
Confidence 4689999999999999999999999999999999986554455678999999999999999999999643 34789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee---cCCCcEEEecc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDF 860 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl---~~~~~~ki~DF 860 (914)
+||||+++++|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||++ +.++.+||+||
T Consensus 83 lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Df 153 (304)
T 2jam_A 83 LVMQLVSGGELFDRILER------GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDF 153 (304)
T ss_dssp EEECCCCSCBHHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSC
T ss_pred EEEEcCCCccHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccC
Confidence 999999999999998754 3688999999999999999999999 99999999999999 77899999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++..... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 154 g~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 201 (304)
T 2jam_A 154 GLSKMEQNG----------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILL 201 (304)
T ss_dssp STTCCCCCB----------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHH
T ss_pred CcceecCCC----------ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHH
Confidence 999754321 112346999999999984 57999999999999873
No 212
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.97 E-value=1.5e-31 Score=292.34 Aligned_cols=205 Identities=20% Similarity=0.233 Sum_probs=165.2
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++..+++.||||++........+.+.+|++++++++||||+++++++.... ......+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER-GAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE-TTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc-CCCceeE
Confidence 468999999999999999999999899999999997666666678999999999999999999999875321 2334789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++|+|.+++..... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 107 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKD--KGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EEEEeCCCCcHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 99999999999999876321 125689999999999999999999999 9999999999999999999999999998
Q ss_pred ccccccccccc-cCCCCccccccCcccccccchhh-------hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIA-SKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~-~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~f 914 (914)
+.......... ...........||+.|+|||++. +.++||||+||++++|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~ 240 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM 240 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHH
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHH
Confidence 76532111000 00000112346899999999984 57999999999999873
No 213
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.2e-31 Score=294.34 Aligned_cols=281 Identities=19% Similarity=0.237 Sum_probs=140.7
Q ss_pred CCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccccccccc
Q 042766 99 NLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRL 178 (914)
Q Consensus 99 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 178 (914)
.++.....++++|+++ .+|..+. ++|++|+|++|++++..+..+.++++|++|+|++|++++..|..|+++++|++|
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 3344445666666666 5565444 366666666666664444455556666666665555554444455555555555
Q ss_pred ccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCC-CccccccccceeeccCCc-
Q 042766 179 SVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFP-RSICNISSVELIFLTENR- 256 (914)
Q Consensus 179 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~- 256 (914)
+|++|++++..+..|+++++|++|+|++|+++ +..+ ..|.++++|++|++++|+
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~------------------------~l~~~~~~~~l~~L~~L~l~~n~~ 161 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK------------------------TLGETSLFSHLTKLQILRVGNMDT 161 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS------------------------SSCSSCSCTTCTTCCEEEEEESSS
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCc------------------------ccCchhhhccCCCCcEEECCCCcc
Confidence 55555555332233444444444444444444 2222 234444444444444442
Q ss_pred ccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCC
Q 042766 257 FSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTAN 336 (914)
Q Consensus 257 l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 336 (914)
++ .++...+.++++|++|++++|++++..|..+..+++|++|++++|+++...+..+..+++|++|++++|.+++..
T Consensus 162 ~~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~-- 238 (353)
T 2z80_A 162 FT-KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFH-- 238 (353)
T ss_dssp CC-EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCC--
T ss_pred cc-ccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccc--
Confidence 22 222223334445555555555555444555555555555555555554433333333444444444444444332
Q ss_pred CcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccc----c
Q 042766 337 DLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHG----T 412 (914)
Q Consensus 337 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~----~ 412 (914)
+..+.. ......++.++|++|.+++ .
T Consensus 239 ----------------------------~~~l~~----------------------~~~~~~l~~l~L~~~~l~~~~l~~ 268 (353)
T 2z80_A 239 ----------------------------FSELST----------------------GETNSLIKKFTFRNVKITDESLFQ 268 (353)
T ss_dssp ----------------------------CC----------------------------CCCCCCEEEEESCBCCHHHHHH
T ss_pred ----------------------------cccccc----------------------ccccchhhccccccccccCcchhh
Confidence 111110 0112223344444444432 3
Q ss_pred CChhhhcccCCceeeecccccccccCcc-ccCCCCCCeEEeeCCcCCCC
Q 042766 413 IPDVISELKNLQQLSVFNNFLRGGIPSG-LGNLTKLGSLDLGSNSLQGN 460 (914)
Q Consensus 413 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~ 460 (914)
+|..+..+++|++|+|++|+++. +|.. |.++++|++|+|++|.+++.
T Consensus 269 l~~~l~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 269 VMKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp HHHHHHTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred hHHHHhcccCCCEEECCCCCCCc-cCHHHHhcCCCCCEEEeeCCCccCc
Confidence 55666777777777777777773 4433 56777777777777777653
No 214
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.97 E-value=3.2e-31 Score=290.71 Aligned_cols=190 Identities=25% Similarity=0.421 Sum_probs=153.1
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEE----EEEEeecc-CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVV----AVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v----avK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.+|++.+.||+|+||.||+|++..+++.| |+|.+... .....+.+.+|++++++++||||+++++++...
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----- 89 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 89 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-----
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-----
Confidence 57999999999999999999998777654 66666432 344567899999999999999999999997542
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 90 -~~~~v~~~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~D 160 (327)
T 3lzb_A 90 -TVQLITQLMPFGCLLDYVREHK-----DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 160 (327)
T ss_dssp -SEEEEECCCSSCBHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECC
T ss_pred -CceEEEEecCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEcc
Confidence 3678999999999999998654 4689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+|+........ .......||+.|+|||++. +.++||||+||++|||+
T Consensus 161 fG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell 213 (327)
T 3lzb_A 161 FGLAKLLGAEEKE------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213 (327)
T ss_dssp TTC----------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred CcceeEccCcccc------ccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHH
Confidence 9999876432211 1122345788999999985 58999999999999863
No 215
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=4.5e-31 Score=296.38 Aligned_cols=194 Identities=21% Similarity=0.280 Sum_probs=156.1
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC-----
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDF----- 776 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 776 (914)
...++|++.+.||+|+||+||+|++..+++.||||++...... ..+|+++++.++||||+++++++.....
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 4457899999999999999999999999999999998644322 2379999999999999999999754321
Q ss_pred ----------------------------CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHH
Q 042766 777 ----------------------------EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEY 828 (914)
Q Consensus 777 ----------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~ 828 (914)
....+.++||||++ |+|.+.+..... ....+++..+..++.|++.||+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR--SGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHH
Confidence 23345889999997 588887764211 12578999999999999999999
Q ss_pred HHhCCCCCcEecCCCCCCeeec-CCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcc
Q 042766 829 LHHHCQPPMVHGDLKPSNVLLD-YDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTH 902 (914)
Q Consensus 829 LH~~~~~~ivHrDlkp~NILl~-~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~D 902 (914)
||++ +|+||||||+||+++ .++.+||+|||+|+...... ......||+.|+|||++. +.++|
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~D 224 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---------PSVAYICSRFYRAPELMLGATEYTPSID 224 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---------CCCCCCCCSSCCCHHHHTTCSSCCTHHH
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---------CCcCcccCCCccCHHHhcCCCCCCcchh
Confidence 9999 999999999999998 68999999999998654322 112357899999999874 47899
Q ss_pred cCcccccccccC
Q 042766 903 IPSFSCTNVHHF 914 (914)
Q Consensus 903 i~s~g~~~~~~f 914 (914)
|||+||++|||+
T Consensus 225 iwslG~il~ell 236 (383)
T 3eb0_A 225 LWSIGCVFGELI 236 (383)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhhHHHHHHHHH
Confidence 999999999873
No 216
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=4.9e-31 Score=287.03 Aligned_cols=191 Identities=20% Similarity=0.299 Sum_probs=156.1
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC---cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
..++|++.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++++.. .
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-----~ 106 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI-----D 106 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----T
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-----C
Confidence 35789999999999999999999999999999999964432 234678999999999999999999999654 3
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
+..++||||+++++|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~D 177 (309)
T 2h34_A 107 GQLYVDMRLINGVDLAAMLRRQ------GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVD 177 (309)
T ss_dssp TEEEEEEECCCCEEHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECS
T ss_pred CeEEEEEEecCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEec
Confidence 4789999999999999999764 3689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++....... .......||+.|+|||++. +.++|+||+||++++|+
T Consensus 178 fg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 229 (309)
T 2h34_A 178 FGIASATTDEKL-------TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECL 229 (309)
T ss_dssp CCC-----------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHH
T ss_pred CccCcccccccc-------ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHH
Confidence 999986543221 1112356999999999984 57899999999999874
No 217
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.97 E-value=5.7e-31 Score=282.91 Aligned_cols=187 Identities=21% Similarity=0.382 Sum_probs=162.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|++++++++||||+++++++.. ..
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 87 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD-----RK 87 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc-----CC
Confidence 36899999999999999999999999999999999643 23345688999999999999999999999653 34
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Df 158 (284)
T 2vgo_A 88 RIYLMLEFAPRGELYKELQKH------GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADF 158 (284)
T ss_dssp EEEEEECCCTTEEHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCC
T ss_pred EEEEEEEeCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecc
Confidence 789999999999999999764 3588999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|++....... .....||+.|+|||++. +.++|+||+||++++|+
T Consensus 159 g~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 206 (284)
T 2vgo_A 159 GWSVHAPSLR----------RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFL 206 (284)
T ss_dssp TTCEECSSSC----------BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHH
T ss_pred cccccCcccc----------cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHH
Confidence 9987543211 12357999999999985 47899999999999863
No 218
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.97 E-value=6.4e-31 Score=289.52 Aligned_cols=198 Identities=24% Similarity=0.416 Sum_probs=160.5
Q ss_pred HhhcccccCcccCCccEEEEEEEEC-------CCcEEEEEEEeeccC-CcchHHHHHHHHHHHhc-CCCCcceEEeEeec
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILG-------DDEMVVAVKVINLKQ-KGASKSFVSECEALRNI-RHRNLIKIITICSS 773 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 773 (914)
..++|++.+.||+|+||.||+|++. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3478999999999999999999985 356789999997443 23456789999999999 89999999999643
Q ss_pred CCCCCCceEeEEEecccCCCHHHHHhccCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCC
Q 042766 774 TDFEGVDFKALVFEYMENGSLEDWLHQSNDQ----------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLK 843 (914)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlk 843 (914)
.+..++||||+++|+|.+++...... .....+++.+++.++.|++.||+|||++ +|+|||||
T Consensus 113 -----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlk 184 (334)
T 2pvf_A 113 -----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLA 184 (334)
T ss_dssp -----SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCS
T ss_pred -----CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCc
Confidence 34789999999999999999865321 0123589999999999999999999999 99999999
Q ss_pred CCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 844 PSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 844 p~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+||+++.++.+||+|||+++........ .......||+.|+|||++. +.++||||+||+++||+
T Consensus 185 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell 253 (334)
T 2pvf_A 185 ARNVLVTENNVMKIADFGLARDINNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253 (334)
T ss_dssp GGGEEECTTCCEEECCCTTCEECTTTSSE------ECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred cceEEEcCCCCEEEccccccccccccccc------cccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHH
Confidence 99999999999999999999866432211 1112346889999999985 48899999999999873
No 219
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.97 E-value=5.5e-31 Score=291.07 Aligned_cols=188 Identities=23% Similarity=0.363 Sum_probs=154.0
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--cchHHHHHHHHHHHhcCC--CCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--GASKSFVSECEALRNIRH--RNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~~ 779 (914)
..+|++.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|++++++++| |||+++++++.. .
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-----~ 81 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-----D 81 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----S
T ss_pred cCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee-----C
Confidence 357999999999999999999985 688999999975432 234678999999999987 999999999654 3
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++|||| .+++|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+|||++ ++.+||+|
T Consensus 82 ~~~~lv~e~-~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~D 150 (343)
T 3dbq_A 82 QYIYMVMEC-GNIDLNSWLKKK------KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLID 150 (343)
T ss_dssp SEEEEEECC-CSEEHHHHHHHS------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECC
T ss_pred CEEEEEEeC-CCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEee
Confidence 478999995 588999999865 4688999999999999999999999 999999999999997 67899999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh---------------hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------------~~~~Di~s~g~~~~~~f 914 (914)
||+|+........ ......+||+.|+|||++. +.++||||+||++|||+
T Consensus 151 FG~a~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell 214 (343)
T 3dbq_A 151 FGIANQMQPDTTS------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 214 (343)
T ss_dssp CSSSCCC------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHH
T ss_pred cccccccCccccc------ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHH
Confidence 9999876432211 1122457999999999984 36899999999999873
No 220
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=7.4e-31 Score=279.25 Aligned_cols=189 Identities=28% Similarity=0.458 Sum_probs=161.0
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++. +++.||+|++..... ..+.+.+|++++++++||||+++++++.. .+..+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 79 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE-----QAPIC 79 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECS-----SSSCE
T ss_pred hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcc-----CCCeE
Confidence 368999999999999999999997 567899999975433 44789999999999999999999999643 34689
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 80 lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~ 151 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQR-----GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMT 151 (267)
T ss_dssp EEECCCTTCBHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGG
T ss_pred EEEeCCCCCcHHHHHhhCc-----ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccc
Confidence 9999999999999997653 4688999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........ ......||+.|+|||++. +.++|+||+||++|+|+
T Consensus 152 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 199 (267)
T 3t9t_A 152 RFVLDDQYT-------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 199 (267)
T ss_dssp GGBCCHHHH-------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccc-------ccccccccccccChhhhcCCCccchhchhhhHHHHHHHh
Confidence 865432211 112346888999999985 47899999999999873
No 221
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.97 E-value=2.6e-31 Score=291.71 Aligned_cols=201 Identities=23% Similarity=0.325 Sum_probs=163.1
Q ss_pred HHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCC
Q 042766 698 AELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSSTDF 776 (914)
Q Consensus 698 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 776 (914)
.++....++|++.+.||+|+||.||+|++..+++.||||++.... ...+.+.+|+.+++++ +||||+++++++.....
T Consensus 17 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (326)
T 2x7f_A 17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95 (326)
T ss_dssp CCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred hhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence 334445678999999999999999999999899999999997543 3457889999999999 79999999999765322
Q ss_pred C-CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcE
Q 042766 777 E-GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVA 855 (914)
Q Consensus 777 ~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 855 (914)
. .....++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 96 PGMDDQLWLVMEFCGAGSVTDLIKNTK----GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp -CCCCEEEEEEECCTTEEHHHHHHHSG----GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCE
T ss_pred ccccceEEEEEEcCCCCcHHHHHHhcc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCE
Confidence 1 1357899999999999999998643 24688999999999999999999999 99999999999999999999
Q ss_pred EEecccccccccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccccC
Q 042766 856 HVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 856 ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~~f 914 (914)
||+|||+++...... .......||+.|+|||++. +.++|+||+||++++|+
T Consensus 169 kl~Dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~ 228 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTV--------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228 (326)
T ss_dssp EECCCTTTC---------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHH
T ss_pred EEeeCcCceecCcCc--------cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHH
Confidence 999999998653211 1112357999999999984 47899999999999873
No 222
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.97 E-value=4.4e-31 Score=299.63 Aligned_cols=191 Identities=24% Similarity=0.375 Sum_probs=154.6
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC-CCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDF-EGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~~~~ 783 (914)
.+|+..+.||+|+||+||+|++..+++.||||++..... ...+|++++++++||||+++++++..... ....+.+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 478999999999999999999999999999999864322 23479999999999999999998754321 2334577
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC-CcEEEecccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD-MVAHVGDFGL 862 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~-~~~ki~DFGl 862 (914)
+||||+++ ++.+.+.... .....+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+
T Consensus 130 lv~e~~~~-~l~~~~~~~~--~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYS--RAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEECCCE-EHHHHHHHHH--HTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred eehhcccc-cHHHHHHHHh--hccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 99999975 6776665321 1125789999999999999999999999 99999999999999965 6789999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+.+.... ......||+.|+|||++. +.++||||+||++|||+
T Consensus 204 a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell 251 (420)
T 1j1b_A 204 AKQLVRGE---------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251 (420)
T ss_dssp CEECCTTC---------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred hhhcccCC---------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHH
Confidence 98654321 112357999999999984 47899999999999974
No 223
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.97 E-value=4e-31 Score=281.84 Aligned_cols=186 Identities=22% Similarity=0.341 Sum_probs=158.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|++.+.||+|+||.||+|++. ++.||||+++... ....+.+.+|++++++++||||+++++++.... ...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP---APH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT---SSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCC---CCC
Confidence 358999999999999999999985 7889999997543 234467999999999999999999999975432 246
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC--cEecCCCCCCeeecCCCcEEEec
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPP--MVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~--ivHrDlkp~NILl~~~~~~ki~D 859 (914)
.++||||+++|+|.+++..... ..+++.+++.++.|++.|++|||++ + |+||||||+||+++.++.++|+|
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~ 156 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGTN----FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISM 156 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCSS----CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEG
T ss_pred eEeeecccCCCcHHHHHhhccc----CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEe
Confidence 7899999999999999986532 3689999999999999999999998 7 99999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhhh-------hhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM-------LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~-------~~~Di~s~g~~~~~~f 914 (914)
||++..... ....||+.|+|||++.+ .++||||+||+++||+
T Consensus 157 ~~~~~~~~~-------------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~ 205 (271)
T 3kmu_A 157 ADVKFSFQS-------------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 205 (271)
T ss_dssp GGSCCTTSC-------------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred ccceeeecc-------------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHH
Confidence 998764321 12468999999999953 2699999999999874
No 224
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.97 E-value=5.3e-31 Score=289.78 Aligned_cols=189 Identities=24% Similarity=0.381 Sum_probs=157.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc--chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG--ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+.+|++++++++||||+++++++.. ...
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~ 98 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK-----KKR 98 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-----CCE
Confidence 36899999999999999999999999999999998644332 34567899999999999999999999654 347
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||++++++.++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 169 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLELFP------NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFG 169 (331)
T ss_dssp EEEEEECCSEEHHHHHHHST------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCcchHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCC
Confidence 89999999999999887644 3589999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+++....... ......||+.|+|||++. +.++||||+||++|+|+
T Consensus 170 ~~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~ 219 (331)
T 4aaa_A 170 FARTLAAPGE--------VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMF 219 (331)
T ss_dssp TC--------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHH
T ss_pred CceeecCCcc--------ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHH
Confidence 9986543211 112346999999999984 47899999999999873
No 225
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.97 E-value=8.1e-33 Score=301.30 Aligned_cols=246 Identities=17% Similarity=0.192 Sum_probs=141.0
Q ss_pred CCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCC-CCcCCCCcc-------ccCCcchhccCCCcccCCCChhc--c
Q 042766 101 SFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSF-SGTIPTNLS-------RCSNLIHFCASNNKLEGQIPKEI--G 170 (914)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~l~-------~l~~L~~L~Ls~N~l~~~~p~~~--~ 170 (914)
++|++|++++|.+ .+|..+... |++|+|++|++ .+.+|..+. ++++|++|+|++|++++.+|..+ +
T Consensus 43 ~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 118 (312)
T 1wwl_A 43 RSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEA 118 (312)
T ss_dssp EECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSC
T ss_pred CCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHh
Confidence 3455555555555 455444433 55555555555 233444443 45555555555555555555544 5
Q ss_pred ccccccccccccccccCcCCcccccc-----cccceeecccCCCCCCCCccchhhhcccccccccccccCC--CCCcc--
Q 042766 171 NLLKLQRLSVDINYLTGQLPDSVGNL-----SAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGM--FPRSI-- 241 (914)
Q Consensus 171 ~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~-- 241 (914)
.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+.+++|++|+|++|++.+. .|..+
T Consensus 119 ~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 197 (312)
T 1wwl_A 119 TGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCP 197 (312)
T ss_dssp CSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCT
T ss_pred cCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHh
Confidence 555555555555555544 5555555 5566666666666655555666666666666666665443 22222
Q ss_pred ccccccceeeccCCcccC--cccccccccCcccceeeccCccCCCCCC-CccccccccccccccCccCCccccccccccc
Q 042766 242 CNISSVELIFLTENRFSG--IFPFDILLNLPNLKKLGIGGNNFVGSIP-DSLSNASNLELLDLPSNQFKGKVSIDFSSLK 318 (914)
Q Consensus 242 ~~l~~L~~L~L~~N~l~~--~~p~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 318 (914)
..+++|++|+|++|++++ .++..++.++++|++|+|++|++++..| ..+..+++|++|+|++|+|+ .+|..+. +
T Consensus 198 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~ 274 (312)
T 1wwl_A 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--A 274 (312)
T ss_dssp TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--S
T ss_pred ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--C
Confidence 566666666666666653 2333444566677777777777766554 34555667777777777776 3344443 6
Q ss_pred cccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCC
Q 042766 319 NLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGG 362 (914)
Q Consensus 319 ~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 362 (914)
+|++|+|++|+|++.+ . +..+++|++|+|++|++++
T Consensus 275 ~L~~L~Ls~N~l~~~p-------~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 275 KLSVLDLSYNRLDRNP-------S-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp EEEEEECCSSCCCSCC-------C-TTTSCEEEEEECTTCTTTC
T ss_pred CceEEECCCCCCCCCh-------h-HhhCCCCCEEeccCCCCCC
Confidence 6777777777766541 1 4566777777777777664
No 226
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.97 E-value=1.2e-30 Score=283.27 Aligned_cols=187 Identities=27% Similarity=0.370 Sum_probs=163.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
+.|+..+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++... ...+
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 96 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-----TKLW 96 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----CeEE
Confidence 56899999999999999999999999999999997554 34557899999999999999999999996543 4789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++.. ..+++.++..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 97 lv~e~~~~~~L~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~ 166 (303)
T 3a7i_A 97 IIMEYLGGGSALDLLEP-------GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA 166 (303)
T ss_dssp EEEECCTTEEHHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEeCCCCcHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccc
Confidence 99999999999999864 3588999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+....... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 167 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 213 (303)
T 3a7i_A 167 GQLTDTQI--------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 213 (303)
T ss_dssp EECBTTBC--------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred eecCcccc--------ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHc
Confidence 87643221 112357999999999984 47899999999999873
No 227
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.97 E-value=6.9e-31 Score=293.45 Aligned_cols=190 Identities=23% Similarity=0.280 Sum_probs=152.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCC-CCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTD-FEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~ 780 (914)
.++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.+++.++||||+++++++.... .+...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 368999999999999999999999999999999997432 233467889999999999999999999976432 23334
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||++ |+|.+++. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 104 ~~~lv~e~~~-~~l~~~~~--------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 171 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQ--------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 171 (371)
T ss_dssp EEEEEEECCS-EEHHHHHH--------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCC
T ss_pred ceEEEEEcCC-CCHHHHHh--------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEe
Confidence 7899999997 47888875 2478889999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+|+...... ......||+.|+|||++. +.++||||+||++|+|+
T Consensus 172 g~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 220 (371)
T 2xrw_A 172 GLARTAGTSF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 220 (371)
T ss_dssp CC-------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred eccccccccc---------ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHH
Confidence 9998653211 112357999999999985 58899999999999873
No 228
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.97 E-value=9.4e-31 Score=283.31 Aligned_cols=189 Identities=27% Similarity=0.348 Sum_probs=162.6
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC---------cchHHHHHHHHHHHhcC-CCCcceEEeEee
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK---------GASKSFVSECEALRNIR-HRNLIKIITICS 772 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 772 (914)
..++|++.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 45689999999999999999999999999999999975431 22357889999999996 999999999964
Q ss_pred cCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC
Q 042766 773 STDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD 852 (914)
Q Consensus 773 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~ 852 (914)
. ....++||||+++++|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 95 ~-----~~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~ 160 (298)
T 1phk_A 95 T-----NTFFFLVFDLMKKGELFDYLTEK------VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDD 160 (298)
T ss_dssp C-----SSEEEEEEECCTTCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred c-----CCeEEEEEeccCCCcHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCC
Confidence 3 45789999999999999999754 4689999999999999999999999 99999999999999999
Q ss_pred CcEEEecccccccccccccccccCCCCccccccCcccccccchhh----------hhhcccCcccccccccC
Q 042766 853 MVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 853 ~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----------~~~~Di~s~g~~~~~~f 914 (914)
+.+||+|||+++...... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 161 ~~~kl~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~ 223 (298)
T 1phk_A 161 MNIKLTDFGFSCQLDPGE---------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 223 (298)
T ss_dssp CCEEECCCTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHH
T ss_pred CcEEEecccchhhcCCCc---------ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHH
Confidence 999999999998654321 112357999999999985 36899999999999873
No 229
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.97 E-value=5.8e-31 Score=293.40 Aligned_cols=199 Identities=23% Similarity=0.288 Sum_probs=160.4
Q ss_pred HHHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc-----------chHHHHHHHHHHHhcCCCCcc
Q 042766 697 YAELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG-----------ASKSFVSECEALRNIRHRNLI 765 (914)
Q Consensus 697 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv 765 (914)
.+++....++|++.+.||+|+||.||+|++.. ++.||||++...... ..+.+.+|++++++++||||+
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 56677788999999999999999999999864 889999998643211 126889999999999999999
Q ss_pred eEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCC
Q 042766 766 KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPS 845 (914)
Q Consensus 766 ~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~ 845 (914)
++++++...........++||||++ |++.+++...+ ..+++..+..++.|++.||+|||++ +|+||||||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~ 163 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR-----IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPG 163 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGG
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChH
Confidence 9999986654445557899999997 68988887543 4689999999999999999999999 9999999999
Q ss_pred CeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 846 NVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 846 NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
||+++.++.+||+|||+|+...... ......||+.|+|||++. +.++||||+||++|+|+
T Consensus 164 NIl~~~~~~~kl~Dfg~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~ 228 (362)
T 3pg1_A 164 NILLADNNDITICDFNLAREDTADA---------NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228 (362)
T ss_dssp GEEECTTCCEEECCTTC------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHH
T ss_pred HEEEcCCCCEEEEecCccccccccc---------ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHH
Confidence 9999999999999999997543221 122357999999999874 47899999999999873
No 230
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.97 E-value=1.8e-31 Score=297.00 Aligned_cols=189 Identities=23% Similarity=0.353 Sum_probs=144.7
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecC-CCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSST-DFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~~~ 780 (914)
.++|+..+.||+|+||.||+|++..+++.||||++.... ....+++.+|++++++++||||+++++++... ..+...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 368999999999999999999999999999999986432 23456788999999999999999999997543 122334
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+ +++|.+++.. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DF 176 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC-------QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF 176 (367)
T ss_dssp CCEEEEECC-CEECC------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-
T ss_pred eEEEEeccc-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeec
Confidence 679999999 7899998864 3588999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+|+..... .....||+.|+|||++. +.++||||+||+++||+
T Consensus 177 G~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 224 (367)
T 2fst_X 177 GLARHTADE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224 (367)
T ss_dssp -------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHH
T ss_pred ccccccccc-----------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHH
Confidence 999864321 12357999999999984 47899999999999874
No 231
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.97 E-value=4.5e-31 Score=283.28 Aligned_cols=189 Identities=21% Similarity=0.415 Sum_probs=156.8
Q ss_pred hhcccccCcccCCccEEEEEEEECC---CcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGD---DEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.++|.+.+.||+|+||.||+|++.. ++..||+|+++... ....+.+.+|++++++++||||+++++++..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------ 84 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE------ 84 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS------
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC------
Confidence 4689999999999999999998643 45679999987543 3345788999999999999999999998642
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
+..++||||+++++|.+++...+ ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|
T Consensus 85 ~~~~~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 156 (281)
T 3cc6_A 85 EPTWIIMELYPYGELGHYLERNK-----NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGD 156 (281)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHT-----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECC
T ss_pred CCCEEEEecCCCCCHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCc
Confidence 23589999999999999997643 4688999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
||+++........ ......||+.|+|||++. +.++|+||+||++++|
T Consensus 157 fg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 207 (281)
T 3cc6_A 157 FGLSRYIEDEDYY-------KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI 207 (281)
T ss_dssp CCGGGCC----------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred cCCCccccccccc-------ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHH
Confidence 9999866432211 112345789999999985 4789999999999987
No 232
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.97 E-value=1.5e-31 Score=293.07 Aligned_cols=203 Identities=22% Similarity=0.376 Sum_probs=164.6
Q ss_pred HHHHHHhhcccccCcccCCccEEEEEEEEC-----CCcEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEe
Q 042766 698 AELSKATSEFSSSNMIGQGRFGTVYKGILG-----DDEMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITIC 771 (914)
Q Consensus 698 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~ 771 (914)
+++....++|++.+.||+|+||.||+|++. .+++.||||++..... .....+.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344455678999999999999999999886 3578899999964432 3345788999999999999999999996
Q ss_pred ecCCCCCCceEeEEEecccCCCHHHHHhccCCc----ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCe
Q 042766 772 SSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQ----VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNV 847 (914)
Q Consensus 772 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NI 847 (914)
.. ....++||||+++|+|.+++...+.. .....+++..++.++.|++.||+|||++ +|+||||||+||
T Consensus 98 ~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NI 169 (322)
T 1p4o_A 98 SQ-----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNC 169 (322)
T ss_dssp CS-----SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGE
T ss_pred cc-----CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceE
Confidence 43 34679999999999999999753211 0113568899999999999999999999 999999999999
Q ss_pred eecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 848 LLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 848 Ll~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+++.++.+||+|||+++......... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 170 li~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 234 (322)
T 1p4o_A 170 MVAEDFTVKIGDFGMTRDIYETDYYR------KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234 (322)
T ss_dssp EECTTCCEEECCTTCCCGGGGGGCEE------GGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred EEcCCCeEEECcCccccccccccccc------cccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHH
Confidence 99999999999999998654322111 112346789999999985 48899999999999873
No 233
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.97 E-value=1.2e-30 Score=282.02 Aligned_cols=190 Identities=25% Similarity=0.362 Sum_probs=158.4
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALV 785 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 785 (914)
+|.....||+|+||.||+|++..+++.||||++........+.+.+|+.++++++||||+++++++... +..++|
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv 97 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN-----GFIKIF 97 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEET-----TEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeC-----CcEEEE
Confidence 344556999999999999999999999999999866666678899999999999999999999996543 478999
Q ss_pred EecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC-CCcEEEecccccc
Q 042766 786 FEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY-DMVAHVGDFGLAK 864 (914)
Q Consensus 786 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DFGla~ 864 (914)
|||+++++|.+++..... ...+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||+++
T Consensus 98 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~ 171 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKWG---PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 171 (295)
T ss_dssp EECCSEEEHHHHHHHTTC---CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCE
T ss_pred EEeCCCCCHHHHHHhhcc---CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeeccccc
Confidence 999999999999976431 23567888999999999999999999 9999999999999987 8999999999998
Q ss_pred cccccccccccCCCCccccccCcccccccchhh------hhhcccCcccccccccC
Q 042766 865 FLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~~~~~~f 914 (914)
....... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 172 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~ 219 (295)
T 2clq_A 172 RLAGINP--------CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMA 219 (295)
T ss_dssp ESCC-------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHH
T ss_pred ccCCCCC--------cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHH
Confidence 6543211 112357999999999984 36899999999999873
No 234
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=9.1e-31 Score=284.58 Aligned_cols=250 Identities=21% Similarity=0.276 Sum_probs=209.0
Q ss_pred CEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccC--CCChhccccccccccccc
Q 042766 104 RYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEG--QIPKEIGNLLKLQRLSVD 181 (914)
Q Consensus 104 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~ 181 (914)
+.+++++++++ .+|..+. ++|++|+|++|+++...+..++++++|++|+|++|+++. ..|..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 57889999998 7887664 689999999999994444457999999999999999983 347788889999999999
Q ss_pred cccccCcCCcccccccccceeecccCCCCCCCC-ccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCc
Q 042766 182 INYLTGQLPDSVGNLSAIEVIRITENSLGGKIP-TTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGI 260 (914)
Q Consensus 182 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 260 (914)
+|.++ .+|..+..+++|++|++++|.+++..+ ..+..+++|++|++++|++++..|..|..+++|++|++++|.+++.
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 99998 577789999999999999999987665 6789999999999999999988888899999999999999999873
Q ss_pred ccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcch
Q 042766 261 FPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDF 340 (914)
Q Consensus 261 ~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 340 (914)
.....+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|++|++++|.+++. .
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~------~ 239 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS------K 239 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBC------S
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCccc------C
Confidence 3334556888999999999999888788888889999999999999888777888888888888888888776 3
Q ss_pred hhcccCC-CCCcEEeccccccCCC
Q 042766 341 VIFLSNC-SSLKVLSLSDNQFGGE 363 (914)
Q Consensus 341 ~~~l~~l-~~L~~L~Ls~N~l~~~ 363 (914)
+..+..+ ++|++|+|++|.+++.
T Consensus 240 ~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 240 KQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp SSSCCCCCTTCCEEECTTCCEECS
T ss_pred HHHHHhhhccCCEEEccCCCeecc
Confidence 3345666 3788888888888754
No 235
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.97 E-value=3e-31 Score=295.46 Aligned_cols=188 Identities=22% Similarity=0.342 Sum_probs=161.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|++++++++||||+++++++... ...
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 106 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEI 106 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEET-----TEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEEC-----CEE
Confidence 357999999999999999999999999999999997543 33456889999999999999999999996543 478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++++|.+++... ..+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||+
T Consensus 107 ~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 178 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKKA------GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGV 178 (360)
T ss_dssp EEEECCCTTCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCC
T ss_pred EEEEECCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCC
Confidence 9999999999999999764 36889999999999999999999831 799999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++...... .....||+.|+|||++. +.++||||+||++|+|+
T Consensus 179 ~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 224 (360)
T 3eqc_A 179 SGQLIDSM----------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 224 (360)
T ss_dssp CHHHHHHC--------------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHH
T ss_pred Cccccccc----------ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHH
Confidence 97653211 11357999999999985 57899999999999873
No 236
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.97 E-value=5.6e-31 Score=288.44 Aligned_cols=188 Identities=26% Similarity=0.336 Sum_probs=156.8
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--------CcchHHHHHHHHHHHhcCCCCcceEEeEeecC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--------KGASKSFVSECEALRNIRHRNLIKIITICSST 774 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 774 (914)
..++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3468999999999999999999999999999999986432 12234588999999999999999999986432
Q ss_pred CCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc
Q 042766 775 DFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV 854 (914)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~ 854 (914)
..++||||+++++|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 88 ------~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~ 152 (322)
T 2ycf_A 88 ------DYYIVLELMEGGELFDKVVGN------KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEE 152 (322)
T ss_dssp ------SEEEEEECCTTEETHHHHSTT------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSS
T ss_pred ------ceEEEEecCCCCcHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCC
Confidence 378999999999999998754 4688999999999999999999999 9999999999999987654
Q ss_pred ---EEEecccccccccccccccccCCCCccccccCcccccccchhh-------hhhcccCcccccccccC
Q 042766 855 ---AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ---~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~f 914 (914)
+||+|||+++...... ......||+.|+|||++. +.++||||+||++|+|+
T Consensus 153 ~~~~kl~Dfg~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~ 213 (322)
T 2ycf_A 153 DCLIKITDFGHSKILGETS---------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 213 (322)
T ss_dssp SCCEEECCCTTCEECCCCH---------HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHH
T ss_pred CCeEEEccCccceeccccc---------ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHH
Confidence 9999999998654321 112356999999999973 47899999999999873
No 237
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.97 E-value=5.6e-32 Score=303.11 Aligned_cols=195 Identities=14% Similarity=0.149 Sum_probs=151.8
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHH---HHHhcCCCCcceEE-------eE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECE---ALRNIRHRNLIKII-------TI 770 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~h~niv~l~-------~~ 770 (914)
.++|++.+.||+|+||+||+|++..+++.||||++... .....+.+.+|++ .+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46799999999999999999999889999999999743 3345578899994 55566899999998 44
Q ss_pred eecCC-------CCCCc-----eEeEEEecccCCCHHHHHhccCCccc-ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 042766 771 CSSTD-------FEGVD-----FKALVFEYMENGSLEDWLHQSNDQVE-VRKLSLIQRMNIAIDVASAIEYLHHHCQPPM 837 (914)
Q Consensus 771 ~~~~~-------~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~-~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~i 837 (914)
+.... ++... ..++||||+ +|+|.+++...+...+ ...+++..++.|+.|++.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 33221 00111 268999999 6899999986421111 12344578889999999999999999 99
Q ss_pred EecCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhhh---------------hhcc
Q 042766 838 VHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM---------------LYTH 902 (914)
Q Consensus 838 vHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~---------------~~~D 902 (914)
+||||||+|||++.++.+||+|||+|+.... .....+| +.|+|||++.+ .++|
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~D 295 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFD 295 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----------cccCCCC-cCccChhhhcccccccccccccccCChhhh
Confidence 9999999999999999999999999985322 1123568 99999999854 4899
Q ss_pred cCcccccccccC
Q 042766 903 IPSFSCTNVHHF 914 (914)
Q Consensus 903 i~s~g~~~~~~f 914 (914)
||||||++|||+
T Consensus 296 vwSlG~il~ell 307 (377)
T 3byv_A 296 AWALGLVIYWIW 307 (377)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999874
No 238
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=7.7e-32 Score=297.16 Aligned_cols=181 Identities=19% Similarity=0.216 Sum_probs=149.8
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--------CcchHHHHHHHHHHHhcC---------CCCcce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--------KGASKSFVSECEALRNIR---------HRNLIK 766 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~ 766 (914)
.++|++.+.||+|+||+||+|++ +++.||||+++... ....+.+.+|++++++++ ||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 46799999999999999999998 57999999997543 223378899999999886 888888
Q ss_pred EEeEeecCC-------------------------CCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHH
Q 042766 767 IITICSSTD-------------------------FEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAID 821 (914)
Q Consensus 767 l~~~~~~~~-------------------------~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ 821 (914)
+.+++.... +......++||||+++|++.+.+.+ ..+++.++..++.|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-------~~~~~~~~~~i~~q 169 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-------KLSSLATAKSILHQ 169 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-------TCCCHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-------cCCCHHHHHHHHHH
Confidence 877653211 1124678999999999977666643 35789999999999
Q ss_pred HHHHHHHHH-hCCCCCcEecCCCCCCeeecCCC--------------------cEEEecccccccccccccccccCCCCc
Q 042766 822 VASAIEYLH-HHCQPPMVHGDLKPSNVLLDYDM--------------------VAHVGDFGLAKFLSNHHLDIASKTPSS 880 (914)
Q Consensus 822 i~~gl~~LH-~~~~~~ivHrDlkp~NILl~~~~--------------------~~ki~DFGla~~~~~~~~~~~~~~~~~ 880 (914)
|+.||+||| ++ +|+||||||+|||++.++ .+||+|||+|+...+.
T Consensus 170 i~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----------- 235 (336)
T 2vuw_A 170 LTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----------- 235 (336)
T ss_dssp HHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----------
T ss_pred HHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----------
Confidence 999999999 88 999999999999999887 9999999999865421
Q ss_pred cccccCcccccccchhh---hhhcccCccccc
Q 042766 881 SIGIKGTVGYVAPGKFF---MLYTHIPSFSCT 909 (914)
Q Consensus 881 ~~~~~GT~~y~APE~~~---~~~~Di~s~g~~ 909 (914)
..+||+.|||||++. +.++||||++++
T Consensus 236 --~~~gt~~y~aPE~~~g~~~~~~Diwsl~~~ 265 (336)
T 2vuw_A 236 --IVVFCDVSMDEDLFTGDGDYQFDIYRLMKK 265 (336)
T ss_dssp --EEECCCCTTCSGGGCCCSSHHHHHHHHHHH
T ss_pred --cEEEeecccChhhhcCCCccceehhhhhCC
Confidence 247999999999995 478999999887
No 239
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.97 E-value=1.1e-30 Score=279.53 Aligned_cols=188 Identities=28% Similarity=0.394 Sum_probs=155.7
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|++.+.||+|+||.||+|++..+++.||||++... .....+.+.+|++++++++||||+++++++.. ..
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST-----PT 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec-----CC
Confidence 36899999999999999999999989999999999643 23345688999999999999999999999654 34
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++++|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~df 155 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICKH------GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADF 155 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeccCCCcHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeec
Confidence 789999999999999999764 3588999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+++...... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 156 g~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~ 205 (276)
T 2h6d_A 156 GLSNMMSDGE---------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL 205 (276)
T ss_dssp CGGGCCCC----------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCc---------ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHH
Confidence 9998654321 112346999999999984 47899999999999873
No 240
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.97 E-value=5.7e-31 Score=288.92 Aligned_cols=201 Identities=18% Similarity=0.270 Sum_probs=165.1
Q ss_pred CccCHHHHHHHhhccccc-CcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcC-CCCcceEE
Q 042766 693 PMVSYAELSKATSEFSSS-NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIR-HRNLIKII 768 (914)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~ 768 (914)
+.+.++......++|.+. +.||+|+||.||+|++..+++.||+|+++... ......+.+|+.++++++ ||||++++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 344455556666778877 89999999999999999999999999997443 334578899999999995 69999999
Q ss_pred eEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCee
Q 042766 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVL 848 (914)
Q Consensus 769 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NIL 848 (914)
+++.. ....++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||++ +|+||||||+||+
T Consensus 96 ~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl 163 (327)
T 3lm5_A 96 EVYEN-----TSEIILILEYAAGGEIFSLCLPEL----AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNIL 163 (327)
T ss_dssp EEEEC-----SSEEEEEEECCTTEEGGGGGSSCC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred EEEEe-----CCeEEEEEEecCCCcHHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEE
Confidence 99643 447899999999999999986532 25689999999999999999999999 9999999999999
Q ss_pred ecC---CCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 849 LDY---DMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 849 l~~---~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++. ++.+||+|||+++...... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 164 ~~~~~~~~~~kL~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll 227 (327)
T 3lm5_A 164 LSSIYPLGDIKIVDFGMSRKIGHAC---------ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLL 227 (327)
T ss_dssp ESCBTTBCCEEECCGGGCEEC------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred EecCCCCCcEEEeeCccccccCCcc---------ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHH
Confidence 998 7899999999998654321 112357999999999985 47999999999999873
No 241
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.97 E-value=1.3e-30 Score=279.45 Aligned_cols=189 Identities=23% Similarity=0.474 Sum_probs=160.0
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++. ++..||+|+++... ...+.+.+|++++++++||||+++++++.. +..+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~ 83 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ------EPIY 83 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC------CCcE
Confidence 468999999999999999999986 56789999986443 346789999999999999999999998642 2468
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++.... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 84 ~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 156 (279)
T 1qpc_A 84 IITEYMENGSLVDFLKTPS----GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLA 156 (279)
T ss_dssp EEEECCTTCBHHHHTTSHH----HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHhcCC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCccc
Confidence 9999999999999997532 13689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........ ......||+.|+|||++. +.++|+||+||+++||+
T Consensus 157 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 204 (279)
T 1qpc_A 157 RLIEDNEYT-------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204 (279)
T ss_dssp EECSSSCEE-------CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred ccccCcccc-------cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHH
Confidence 876543211 112345788999999985 47899999999999873
No 242
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.97 E-value=4.4e-31 Score=288.43 Aligned_cols=206 Identities=21% Similarity=0.332 Sum_probs=166.2
Q ss_pred CHHHHHHHhhcccccCcccCCccEEEEEEEE-----CCCcEEEEEEEeeccCC-cchHHHHHHHHHHHhc-CCCCcceEE
Q 042766 696 SYAELSKATSEFSSSNMIGQGRFGTVYKGIL-----GDDEMVVAVKVINLKQK-GASKSFVSECEALRNI-RHRNLIKII 768 (914)
Q Consensus 696 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~ 768 (914)
.........++|++.+.||+|+||.||+|++ ..+++.||||+++.... ...+.+.+|+++++++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3344445567899999999999999999985 35779999999975432 2346789999999999 699999999
Q ss_pred eEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcc----------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcE
Q 042766 769 TICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQV----------EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMV 838 (914)
Q Consensus 769 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~iv 838 (914)
+++... ....++||||+++|+|.+++....... ....+++.+++.++.|++.||+|||++ +|+
T Consensus 98 ~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~ 170 (316)
T 2xir_A 98 GACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCI 170 (316)
T ss_dssp EEECCT----TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred EEEecC----CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 997533 245789999999999999998654210 012378999999999999999999999 999
Q ss_pred ecCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 839 HGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 839 HrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||||||+||+++.++.+||+|||+++....... ........||+.|+|||++. +.++||||+||++++|+
T Consensus 171 H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 244 (316)
T 2xir_A 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244 (316)
T ss_dssp CSCCSGGGEEECGGGCEEECCCGGGSCTTTCTT------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred cccCccceEEECCCCCEEECCCccccccccCcc------ceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHH
Confidence 999999999999999999999999986543211 11122356899999999985 48999999999999873
No 243
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.97 E-value=1.8e-30 Score=285.54 Aligned_cols=183 Identities=22% Similarity=0.336 Sum_probs=158.1
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
++|++.+.||+|+||.||+|++..+++.||||+++. ...+.+.+|++++++++ ||||+++++++.... ....+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~---~~~~~ 109 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPV---SRTPA 109 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT---TCCEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCC---CCceE
Confidence 689999999999999999999999999999999863 33578899999999997 999999999976422 34679
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC-cEEEecccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM-VAHVGDFGL 862 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~-~~ki~DFGl 862 (914)
+||||+++++|.+++. .+++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+
T Consensus 110 lv~e~~~~~~l~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~ 177 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQ---------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGL 177 (330)
T ss_dssp EEEECCCCCCHHHHGG---------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEeccCchhHHHHHH---------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCC
Confidence 9999999999999874 377889999999999999999999 999999999999999777 899999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+...... ......||+.|+|||++. +.++||||+||++++|+
T Consensus 178 a~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll 225 (330)
T 3nsz_A 178 AEFYHPGQ---------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 225 (330)
T ss_dssp CEECCTTC---------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred ceEcCCCC---------ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHH
Confidence 98654321 112347999999999984 47899999999999873
No 244
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.97 E-value=1.2e-30 Score=285.50 Aligned_cols=194 Identities=25% Similarity=0.375 Sum_probs=156.2
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCC---------
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTD--------- 775 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--------- 775 (914)
++|++.+.||+|+||.||+|++..+++.||+|++...+....+.+.+|++++++++||||+++++++....
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 57999999999999999999999999999999998666666678999999999999999999999874321
Q ss_pred CCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec-CCCc
Q 042766 776 FEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD-YDMV 854 (914)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~-~~~~ 854 (914)
+......++||||++ |+|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+||+++ .++.
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 159 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ-------GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLV 159 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT-------CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTE
T ss_pred ccccCceeEEeeccC-CCHHHHhhc-------CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCe
Confidence 233457899999997 699999864 3588899999999999999999999 999999999999997 5679
Q ss_pred EEEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+||+|||+++........ ........||+.|+|||++. +.++|+||+||+++||+
T Consensus 160 ~kl~Dfg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~ 219 (320)
T 2i6l_A 160 LKIGDFGLARIMDPHYSH-----KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML 219 (320)
T ss_dssp EEECCCTTCBCC-------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHH
T ss_pred EEEccCccccccCCCccc-----ccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHH
Confidence 999999999876432111 11122356899999999874 47899999999999873
No 245
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=7.9e-31 Score=283.87 Aligned_cols=193 Identities=24% Similarity=0.397 Sum_probs=159.2
Q ss_pred cccccCcccCCccEEEEEEEECCC---cEEEEEEEeeccCC-cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDD---EMVVAVKVINLKQK-GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.|...+.||+|+||.||+|++..+ +..||+|++..... ...+.+.+|++++++++||||+++++++.... ..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE----GL 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS----SC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCC----CC
Confidence 566778999999999999997543 44799999864332 34568899999999999999999999975332 34
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg 169 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSPQ-----RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFG 169 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCTT-----CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTT
T ss_pred cEEEEecccCCCHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCC
Confidence 589999999999999997643 4678899999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+|+........ .........||+.|+|||.+. +.++|+||+||++|+|+
T Consensus 170 ~~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 222 (298)
T 3pls_A 170 LARDILDREYY----SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELL 222 (298)
T ss_dssp SSCTTTTGGGG----CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CcccccCCccc----ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHh
Confidence 99866543211 111223457899999999985 58899999999999873
No 246
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.97 E-value=5.2e-31 Score=302.07 Aligned_cols=189 Identities=27% Similarity=0.475 Sum_probs=155.0
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|+..+.||+|+||.||+|++.. +..||||+++... ...+.+.+|++++++++||||+++++++.. ...+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------~~~~ 254 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIY 254 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred hhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC------CceE
Confidence 3578899999999999999999975 4679999997543 345789999999999999999999998643 3478
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++|+|.+++.... ...+++.+++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 255 iv~e~~~~gsL~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a 327 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGET----GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 327 (452)
T ss_dssp EEECCCTTCBHHHHHSHHH----HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTT
T ss_pred EEehhhcCCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccc
Confidence 9999999999999997532 24588999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........ ......||+.|+|||++. +.++|||||||+++||+
T Consensus 328 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~ 375 (452)
T 1fmk_A 328 RLIEDNEYT-------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375 (452)
T ss_dssp C---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred eecCCCcee-------cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHH
Confidence 876432211 112345788999999985 58999999999999874
No 247
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.97 E-value=1e-30 Score=282.63 Aligned_cols=196 Identities=24% Similarity=0.346 Sum_probs=158.6
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
..++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++|++++..++++.. .....
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----~~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGA----EGDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEE----ETTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecC----CCCce
Confidence 4468999999999999999999999999999999875433 23457889999999999988887777643 23578
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee---cCCCcEEEec
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGD 859 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl---~~~~~~ki~D 859 (914)
++||||+ +++|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~D 151 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCS-----RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECC
T ss_pred EEEEEcc-CCCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEec
Confidence 9999999 999999997543 4689999999999999999999999 99999999999999 7889999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+|+.......... ..........||+.|+|||++. +.++||||+||++|+|+
T Consensus 152 fg~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 209 (296)
T 4hgt_A 152 FGLAKKYRDARTHQH-IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFN 209 (296)
T ss_dssp CTTCEECBCTTTCCB-CCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CccceeccCcccCcc-CCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHh
Confidence 999987654322111 1111223467999999999985 47899999999999873
No 248
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.97 E-value=3.1e-31 Score=284.20 Aligned_cols=195 Identities=25% Similarity=0.368 Sum_probs=162.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++... ....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR---TNTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG---GGTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC---CCce
Confidence 468999999999999999999999999999999997543 23456789999999999999999999986432 2357
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC-----cEecCCCCCCeeecCCCcEE
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPP-----MVHGDLKPSNVLLDYDMVAH 856 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~-----ivHrDlkp~NILl~~~~~~k 856 (914)
.++||||+++++|.+++..... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+|
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~k 156 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKGTK--ERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVK 156 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEE
T ss_pred EEEEEeCCCCCCHHHHHHhhcc--cCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEE
Confidence 8999999999999999975421 124589999999999999999999998 7 99999999999999999999
Q ss_pred EecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 857 VGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 857 i~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+|||+++...... .......||+.|+|||++. +.++|+||+||++++|+
T Consensus 157 l~dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 210 (279)
T 2w5a_A 157 LGDFGLARILNHDT--------SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210 (279)
T ss_dssp ECCCCHHHHC---C--------HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHH
T ss_pred EecCchheeecccc--------ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHH
Confidence 99999998654321 0112356999999999985 58899999999999873
No 249
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.97 E-value=8.1e-31 Score=289.05 Aligned_cols=204 Identities=20% Similarity=0.223 Sum_probs=151.8
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCC---CCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR-HRNLIKIITICSSTDF---EGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~---~~~ 779 (914)
..+|++.+.||+|+||.||+|++..+++.||||++........+.+.+|+.+++++. ||||+++++++..... ...
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 358999999999999999999999999999999997666556678899999999996 9999999999753221 344
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC--cEecCCCCCCeeecCCCcEEE
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPP--MVHGDLKPSNVLLDYDMVAHV 857 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~--ivHrDlkp~NILl~~~~~~ki 857 (914)
...++||||++ |+|.+++.... ....+++.+++.++.|++.||+|||+. + |+||||||+||+++.++.+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKME---SRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHH---TTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred ceEEEEEEecC-CCHHHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 56899999995 79999887522 124689999999999999999999998 7 999999999999999999999
Q ss_pred eccccccccccccccccc----CCCCccccccCcccccccchh-------hhhhcccCcccccccccC
Q 042766 858 GDFGLAKFLSNHHLDIAS----KTPSSSIGIKGTVGYVAPGKF-------FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~----~~~~~~~~~~GT~~y~APE~~-------~~~~~Di~s~g~~~~~~f 914 (914)
+|||+++........... ..........||+.|+|||++ ++.++||||+||++|+|+
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~ 247 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLC 247 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHH
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHH
Confidence 999999876542211000 000112245699999999998 247999999999999873
No 250
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.97 E-value=4.5e-31 Score=290.71 Aligned_cols=200 Identities=22% Similarity=0.352 Sum_probs=162.9
Q ss_pred HHHhhcccccCcccCCccEEEEEEEECCCc-----EEEEEEEeeccCC-cchHHHHHHHHHHHhc-CCCCcceEEeEeec
Q 042766 701 SKATSEFSSSNMIGQGRFGTVYKGILGDDE-----MVVAVKVINLKQK-GASKSFVSECEALRNI-RHRNLIKIITICSS 773 (914)
Q Consensus 701 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 773 (914)
....++|+..+.||+|+||.||+|++..++ +.||+|+++.... ...+.+.+|+++++++ +||||+++++++..
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 344578999999999999999999997655 3799999975432 3456789999999999 89999999999643
Q ss_pred CCCCCCceEeEEEecccCCCHHHHHhccCCcc--------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCC
Q 042766 774 TDFEGVDFKALVFEYMENGSLEDWLHQSNDQV--------EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPS 845 (914)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~ 845 (914)
.+..++||||+++|+|.+++....... ....+++..++.++.|++.||+|||++ +|+||||||+
T Consensus 122 -----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~ 193 (333)
T 2i1m_A 122 -----GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAAR 193 (333)
T ss_dssp -----SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred -----CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccc
Confidence 346899999999999999997542100 123578999999999999999999999 9999999999
Q ss_pred CeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 846 NVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 846 NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+++.++.+||+|||+++........ .......||+.|+|||++. +.++||||+||+++||+
T Consensus 194 NIl~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 260 (333)
T 2i1m_A 194 NVLLTNGHVAKIGDFGLARDIMNDSNY------IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260 (333)
T ss_dssp GCEEEGGGEEEBCCCGGGCCGGGCTTS------EECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHT
T ss_pred eEEECCCCeEEECccccccccccccce------eecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHH
Confidence 999999999999999999865432211 1112346789999999984 58999999999999875
No 251
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=6.1e-31 Score=289.37 Aligned_cols=191 Identities=28% Similarity=0.479 Sum_probs=152.4
Q ss_pred hcccccCcccCCccEEEEEEEECCC----cEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDD----EMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
++|+..+.||+|+||.||+|++..+ +..||||+++... ......+.+|++++++++||||+++++++.. .
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~ 118 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK-----Y 118 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-----S
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec-----C
Confidence 4678889999999999999998644 3569999997443 2334578999999999999999999999643 4
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 119 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~D 190 (333)
T 1mqb_A 119 KPMMIITEYMENGALDKFLREKD-----GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSD 190 (333)
T ss_dssp SSEEEEEECCTTEEHHHHHHHTT-----TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECC
T ss_pred CCcEEEEeCCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECC
Confidence 47899999999999999997643 4689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
||+++........ ........||+.|+|||++. +.++|+||+||+++||
T Consensus 191 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 243 (333)
T 1mqb_A 191 FGLSRVLEDDPEA-----TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEV 243 (333)
T ss_dssp CCC----------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHH
T ss_pred CCcchhhcccccc-----ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHH
Confidence 9999876532211 11112345788999999985 5789999999999986
No 252
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=283.78 Aligned_cols=189 Identities=24% Similarity=0.354 Sum_probs=158.1
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ..+.+.+|++++++++||||+++++++... ...
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 99 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKN-----TDL 99 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEET-----TEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeC-----CEE
Confidence 4568999999999999999999999999999999996533 457789999999999999999999996543 478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||+++++|.+++.... ..+++.++..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 100 ~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 171 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRLRN-----KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGV 171 (314)
T ss_dssp EEEEECCTTEEHHHHHHHHT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEeecCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeeccc
Confidence 99999999999999987432 4689999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++....... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 172 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 219 (314)
T 3com_A 172 AGQLTDTMA--------KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMA 219 (314)
T ss_dssp CEECBTTBS--------CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHH
T ss_pred chhhhhhcc--------ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHH
Confidence 986543211 122357999999999984 57899999999999873
No 253
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.97 E-value=1e-30 Score=278.89 Aligned_cols=187 Identities=25% Similarity=0.396 Sum_probs=147.7
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC----CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ----KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.++|+..+.||+|+||.||+|++. ++.||||+++... ....+.+.+|++++++++||||+++++++.. .
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 78 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK-----E 78 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC-----C
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-----C
Confidence 357999999999999999999985 7889999986432 2334688999999999999999999999643 3
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC--------
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY-------- 851 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~-------- 851 (914)
...++||||+++++|.+++.. ..+++.++..++.|++.|++|||++...+|+||||||+||+++.
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~-------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~ 151 (271)
T 3dtc_A 79 PNLCLVMEFARGGPLNRVLSG-------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLS 151 (271)
T ss_dssp --CEEEEECCTTEEHHHHHTS-------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCS
T ss_pred CceEEEEEcCCCCCHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccccccc
Confidence 468999999999999999864 36889999999999999999999992122999999999999986
Q ss_pred CCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 852 DMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 852 ~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++.+||+|||+++...... .....||+.|+|||++. +.++|+||+||++++|+
T Consensus 152 ~~~~kl~Dfg~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~ 208 (271)
T 3dtc_A 152 NKILKITDFGLAREWHRTT----------KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELL 208 (271)
T ss_dssp SCCEEECCCCC-----------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHH
T ss_pred CcceEEccCCccccccccc----------ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHH
Confidence 6789999999998654321 11346999999999985 57899999999999873
No 254
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.97 E-value=1.6e-30 Score=281.25 Aligned_cols=195 Identities=25% Similarity=0.349 Sum_probs=161.4
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++|++++..++++.. .....+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----~~~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGA----EGDYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEE----ETTEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccC----CCCceE
Confidence 468999999999999999999999999999999986443 33568899999999999988777766543 235789
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee---cCCCcEEEecc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGDF 860 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl---~~~~~~ki~DF 860 (914)
+||||+ +++|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++ +.++.+||+||
T Consensus 82 lv~e~~-~~~L~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 152 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCS-----RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred EEEEec-CCCHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeC
Confidence 999999 999999997543 4689999999999999999999999 99999999999999 48889999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++......... ...........||+.|+|||++. +.++||||+||+++||+
T Consensus 153 g~~~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 209 (296)
T 3uzp_A 153 GLAKKYRDARTHQ-HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFN 209 (296)
T ss_dssp TTCEECBCTTTCC-BCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCccccccccccc-ccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHH
Confidence 9998765432211 01111223567999999999985 47999999999999873
No 255
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.96 E-value=1.3e-30 Score=296.34 Aligned_cols=186 Identities=22% Similarity=0.306 Sum_probs=158.1
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc------CCCCcceEEeEeecCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI------RHRNLIKIITICSSTDFE 777 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~ 777 (914)
..+|++.+.||+|+||.||+|++..+++.||||+++.. ....+.+.+|+++++.+ +|+||+++++++...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~--- 171 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR--- 171 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET---
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC---
Confidence 35799999999999999999999999999999999632 23446778899988887 577999999986543
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc--E
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV--A 855 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~--~ 855 (914)
...++||||++ ++|.+++..... ..+++..+..++.||+.||+|||++ +||||||||+|||++.++. +
T Consensus 172 --~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~v 241 (429)
T 3kvw_A 172 --NHICMTFELLS-MNLYELIKKNKF----QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGI 241 (429)
T ss_dssp --TEEEEEECCCC-CBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCE
T ss_pred --CeEEEEEeccC-CCHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcce
Confidence 47899999995 699999986542 4589999999999999999999999 9999999999999999987 9
Q ss_pred EEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 856 HVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 856 ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+|||+|+..... ....+||+.|||||++. +.++||||+||++|||+
T Consensus 242 kL~DFG~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 293 (429)
T 3kvw_A 242 KVIDFGSSCYEHQR-----------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELL 293 (429)
T ss_dssp EECCCTTCEETTCC-----------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHH
T ss_pred EEeecccceecCCc-----------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHH
Confidence 99999999754321 12357999999999985 58999999999999874
No 256
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.96 E-value=1.5e-30 Score=282.65 Aligned_cols=194 Identities=22% Similarity=0.365 Sum_probs=160.8
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC----CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ----KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|++++++++||||+++++++.. +..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 80 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN---EEK 80 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC---C--
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc---CCC
Confidence 468999999999999999999999999999999996432 3445789999999999999999999998743 223
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||++++ +.+++..... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 81 ~~~~lv~e~~~~~-l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~d 152 (305)
T 2wtk_C 81 QKMYMVMEYCVCG-MQEMLDSVPE----KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISA 152 (305)
T ss_dssp -CEEEEEECCSEE-HHHHHHHSTT----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred CeEEEEehhccCC-HHHHHHhCcc----cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeec
Confidence 4689999999876 7777765432 5689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh------hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~~~~~~f 914 (914)
||+++........ .......||+.|+|||++. +.++|+||+||++++|+
T Consensus 153 fg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~ 207 (305)
T 2wtk_C 153 LGVAEALHPFAAD------DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNIT 207 (305)
T ss_dssp CTTCEECCTTCSS------CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHH
T ss_pred cccccccCccccc------cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHH
Confidence 9999865432111 1122356999999999985 46899999999999873
No 257
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.3e-30 Score=283.45 Aligned_cols=186 Identities=28% Similarity=0.426 Sum_probs=150.6
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++. ++.||||++.. ....+.+.+|++++++++||||+++++++.. ..+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~ 75 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACLN-------PVC 75 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSS--TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT-------TTE
T ss_pred HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecC--hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-------CcE
Confidence 357899999999999999999985 67899999853 3455789999999999999999999998532 358
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc-EEEecccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV-AHVGDFGL 862 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~-~ki~DFGl 862 (914)
+||||+++|+|.+++..... ...+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||+
T Consensus 76 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~ 152 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAEP---LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT 152 (307)
T ss_dssp EEEECCTTCBHHHHHHCSSS---EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC
T ss_pred EEEEcCCCCCHHHHHhccCC---CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccc
Confidence 99999999999999986532 235788899999999999999999932228999999999999998886 79999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
++...... ....||+.|+|||++. +.++|||||||+++||+
T Consensus 153 ~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 197 (307)
T 2eva_A 153 ACDIQTHM-----------TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI 197 (307)
T ss_dssp -----------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHH
T ss_pred cccccccc-----------ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHH
Confidence 97543211 1246999999999985 47999999999999873
No 258
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=2.2e-30 Score=278.80 Aligned_cols=191 Identities=23% Similarity=0.389 Sum_probs=158.6
Q ss_pred hcccccC-cccCCccEEEEEEEEC--CCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 705 SEFSSSN-MIGQGRFGTVYKGILG--DDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 705 ~~~~~~~-~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
++|.+.+ .||+|+||.||+|++. .++..||||+++... ....+.+.+|++++++++||||+++++++.. +
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~ 82 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------E 82 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES------S
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC------C
Confidence 4666666 9999999999999864 467889999997543 3345688999999999999999999999732 2
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++++|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Df 154 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGKR-----EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDF 154 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTCT-----TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCC
T ss_pred CcEEEEEeCCCCCHHHHHHhCC-----ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcc
Confidence 4799999999999999997543 4689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++......... .......||+.|+|||++. +.++|+||+||+++||+
T Consensus 155 g~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell 207 (287)
T 1u59_A 155 GLSKALGADDSYY-----TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL 207 (287)
T ss_dssp TTCEECTTCSCEE-----CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred cceeeeccCccee-----eccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHH
Confidence 9998764322111 1112345789999999985 58999999999999873
No 259
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.9e-30 Score=286.28 Aligned_cols=196 Identities=26% Similarity=0.348 Sum_probs=154.9
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc--CCCCcceEEeEeecCCCCCC
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI--RHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~~~~~ 779 (914)
...++|++.+.||+|+||.||+|++. ++.||||++... ....+.+|.+++... +||||+++++++.... ...
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~ 107 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGT-GSW 107 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC-GGG
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC-CCC
Confidence 34578999999999999999999985 789999998533 234455666666554 8999999999976542 122
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCcEecCCCCCCeeecCCCc
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHC-----QPPMVHGDLKPSNVLLDYDMV 854 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~-----~~~ivHrDlkp~NILl~~~~~ 854 (914)
...++||||+++|+|.++++.. .+++.+++.++.|++.||+|||+++ .++|+||||||+||+++.++.
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST-------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CceEEEEeccCCCcHHHHhhcc-------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence 4789999999999999999653 5889999999999999999999752 348999999999999999999
Q ss_pred EEEecccccccccccccccccCCCCccccccCcccccccchhhh----h------hcccCcccccccccC
Q 042766 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM----L------YTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~----~------~~Di~s~g~~~~~~f 914 (914)
+||+|||+|+.+........ .......||+.|+|||++.+ . ++|||||||++|||+
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~ 246 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVD----IPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246 (337)
T ss_dssp EEECCCTTCEECC-------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCceeecccccccc----CCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHH
Confidence 99999999986643321111 11123579999999999853 2 489999999999873
No 260
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.96 E-value=6.5e-31 Score=283.20 Aligned_cols=188 Identities=29% Similarity=0.460 Sum_probs=148.2
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|++.+.||+|+||.||+|++.. .||+|+++... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~~ 93 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA------PQ 93 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC------Cc
Confidence 4689999999999999999998753 49999997543 2334678999999999999999999997432 24
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg 165 (289)
T 3og7_A 94 LAIVTQWCEGSSLYHHLHASE-----TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFG 165 (289)
T ss_dssp CEEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC
T ss_pred cEEEEEecCCCcHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccce
Confidence 689999999999999997543 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-------hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~f 914 (914)
+++........ .......||+.|+|||++. +.++||||+||++++|+
T Consensus 166 ~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~ 219 (289)
T 3og7_A 166 LATEKSRWSGS------HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 219 (289)
T ss_dssp ------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHH
T ss_pred ecccccccccc------ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHH
Confidence 99865432111 1122357999999999984 36899999999999873
No 261
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=2.8e-30 Score=304.04 Aligned_cols=292 Identities=21% Similarity=0.271 Sum_probs=163.2
Q ss_pred CCCCCCCCCCCCCCccceee------cCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCC
Q 042766 53 GVTSSWNNTMNFCQWTGVTC------GHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFR 126 (914)
Q Consensus 53 ~~~~~w~~~~~~c~w~gv~C------~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 126 (914)
...++|..+.+||.|.|..| ......++.|++++++++ .+|..+. ++|++|+|++|.++ .+|. .+++
T Consensus 10 ~~w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~ 82 (622)
T 3g06_A 10 AVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPE 82 (622)
T ss_dssp CHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTT
T ss_pred HHHHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCC
Confidence 34567877778999977532 111234667777777775 5566554 67777777777776 4554 4566
Q ss_pred CCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeeccc
Q 042766 127 LEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITE 206 (914)
Q Consensus 127 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 206 (914)
|++|+|++|+|+ .+|. .+++|++|+|++|++++ +|. .+++|++|++++|++++ +|.. +++|++|+|++
T Consensus 83 L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~ 150 (622)
T 3g06_A 83 LRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSD 150 (622)
T ss_dssp CCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCS
T ss_pred CCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcC
Confidence 777777777776 4554 55666666666666663 333 34556666666666552 3432 24455555555
Q ss_pred CCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCC
Q 042766 207 NSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSI 286 (914)
Q Consensus 207 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~ 286 (914)
|.+++ +|. .+.+|+.|++++|.+++ +| ..+++|++|+|++|+|++ +
T Consensus 151 N~l~~-l~~---------------------------~~~~L~~L~L~~N~l~~-l~----~~~~~L~~L~Ls~N~l~~-l 196 (622)
T 3g06_A 151 NQLAS-LPA---------------------------LPSELCKLWAYNNQLTS-LP----MLPSGLQELSVSDNQLAS-L 196 (622)
T ss_dssp SCCSC-CCC---------------------------CCTTCCEEECCSSCCSC-CC----CCCTTCCEEECCSSCCSC-C
T ss_pred CcCCC-cCC---------------------------ccCCCCEEECCCCCCCC-Cc----ccCCCCcEEECCCCCCCC-C
Confidence 55542 222 12345555555555553 23 234566666666666653 3
Q ss_pred CCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCc
Q 042766 287 PDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPH 366 (914)
Q Consensus 287 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 366 (914)
|.. +++|+.|++++|+|+.+.. .+++|++|+|++|+|+.++ ..+++|+.|+|++|+|+ .+|.
T Consensus 197 ~~~---~~~L~~L~L~~N~l~~l~~----~~~~L~~L~Ls~N~L~~lp----------~~l~~L~~L~Ls~N~L~-~lp~ 258 (622)
T 3g06_A 197 PTL---PSELYKLWAYNNRLTSLPA----LPSGLKELIVSGNRLTSLP----------VLPSELKELMVSGNRLT-SLPM 258 (622)
T ss_dssp CCC---CTTCCEEECCSSCCSSCCC----CCTTCCEEECCSSCCSCCC----------CCCTTCCEEECCSSCCS-CCCC
T ss_pred CCc---cchhhEEECcCCcccccCC----CCCCCCEEEccCCccCcCC----------CCCCcCcEEECCCCCCC-cCCc
Confidence 332 3556666666666664332 1355666666666665542 23355666666666665 2332
Q ss_pred hhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCC
Q 042766 367 SIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNL 444 (914)
Q Consensus 367 ~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 444 (914)
.+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+++..|..+..+
T Consensus 259 ----------------------------~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 259 ----------------------------LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp ----------------------------CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred ----------------------------ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 2344555555555555 445555555555555555555555555544433
No 262
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.96 E-value=6.9e-31 Score=293.64 Aligned_cols=191 Identities=11% Similarity=0.029 Sum_probs=142.0
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC---cchHHHHHHHHHHHhc--CCCCcceEE-------eEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNI--RHRNLIKII-------TIC 771 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~ 771 (914)
..+|+..+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+++++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 3468999999999999999999999999999999986543 2345677885554444 699988755 332
Q ss_pred ecCCCC------------CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHH------HHHHHHHHHHHHHHHhCC
Q 042766 772 SSTDFE------------GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQR------MNIAIDVASAIEYLHHHC 833 (914)
Q Consensus 772 ~~~~~~------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~------~~i~~~i~~gl~~LH~~~ 833 (914)
...... .....++||||++ |+|.+++...+ ..+++..+ ..++.|++.||+|||++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~- 213 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-----FVYVFRGDEGILALHILTAQLIRLAANLQSK- 213 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-----HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-----cccchhhhhhhhhHHHHHHHHHHHHHHHHHC-
Confidence 211100 0134799999998 89999998642 23344445 67789999999999999
Q ss_pred CCCcEecCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh------hhhcccCccc
Q 042766 834 QPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFS 907 (914)
Q Consensus 834 ~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g 907 (914)
+|+||||||+|||++.++.+||+|||+|+...... ....||+.|||||++. +.++||||+|
T Consensus 214 --~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG 280 (371)
T 3q60_A 214 --GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG-----------PASSVPVTYAPREFLNASTATFTHALNAWQLG 280 (371)
T ss_dssp --TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEE-----------EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHH
T ss_pred --CCccCcCCHHHEEECCCCCEEEEecceeeecCCCc-----------cCccCCcCCcChhhccCCCCCcCccccHHHHH
Confidence 99999999999999999999999999998653211 1245779999999984 4899999999
Q ss_pred ccccccC
Q 042766 908 CTNVHHF 914 (914)
Q Consensus 908 ~~~~~~f 914 (914)
|++|||+
T Consensus 281 ~il~ell 287 (371)
T 3q60_A 281 LSIYRVW 287 (371)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
No 263
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.96 E-value=2.4e-30 Score=279.13 Aligned_cols=191 Identities=26% Similarity=0.384 Sum_probs=157.1
Q ss_pred hhcccccC-cccCCccEEEEEEEE--CCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 704 TSEFSSSN-MIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 704 ~~~~~~~~-~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
.++|.+.+ .||+|+||.||+|++ ..+++.||||+++... ....+.+.+|++++++++||||+++++++..
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 89 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA----- 89 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-----
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-----
Confidence 45788888 999999999999954 5678999999997543 2335689999999999999999999999722
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
+..++||||+++++|.+++... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 90 -~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~ 159 (291)
T 1xbb_A 90 -ESWMLVMEMAELGPLNKYLQQN------RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKIS 159 (291)
T ss_dssp -SSEEEEEECCTTEEHHHHHHHC------TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEEC
T ss_pred -CCcEEEEEeCCCCCHHHHHHhC------cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEc
Confidence 3578999999999999999764 3588999999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||+++......... .......||+.|+|||++. +.++|+||+||++++|+
T Consensus 160 Dfg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 214 (291)
T 1xbb_A 160 DFGLSKALRADENYY-----KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 214 (291)
T ss_dssp CCTTCEECCTTCSEE-----EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH
T ss_pred cCCcceeeccCCCcc-----cccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHH
Confidence 999998764322111 1112235789999999995 47899999999999873
No 264
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.96 E-value=1.5e-30 Score=283.53 Aligned_cols=193 Identities=24% Similarity=0.407 Sum_probs=152.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC---CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ---KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++... +
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~ 105 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED-----N 105 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----T
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-----C
Confidence 457999999999999999999999899999999997532 23456788999999999999999999997543 4
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++++|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Df 180 (310)
T 2wqm_A 106 ELNIVLELADAGDLSRMIKHFKK--QKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDL 180 (310)
T ss_dssp EEEEEEECCCSCBHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred cEEEEEecCCCCCHHHHHHHhcc--cccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEec
Confidence 78999999999999999875321 124688999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++....... ......||+.|+|||++. +.++|+|||||++++|+
T Consensus 181 g~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~ 230 (310)
T 2wqm_A 181 GLGRFFSSKTT--------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA 230 (310)
T ss_dssp --------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred cceeeecCCCc--------cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHH
Confidence 99986543211 112356999999999984 58999999999999873
No 265
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.96 E-value=9.9e-31 Score=305.77 Aligned_cols=189 Identities=27% Similarity=0.475 Sum_probs=160.1
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++.. +..||||+++... ...+.+.+|++++++++||||+++++++.. ...+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~~~ 337 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIY 337 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred hhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee------ccce
Confidence 4578899999999999999999975 4679999997543 345789999999999999999999998643 3478
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++|+|.+++.... ...+++.+++.++.||+.||+|||++ +||||||||+|||++.++.+||+|||++
T Consensus 338 lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 410 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGET----GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 410 (535)
T ss_dssp EEECCCTTEEHHHHHSHHH----HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTST
T ss_pred EeeehhcCCcHHHHHhhcC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccc
Confidence 9999999999999997532 14588999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+........ ......+|..|||||++. +.++|||||||+++||+
T Consensus 411 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~ 458 (535)
T 2h8h_A 411 RLIEDNEYT-------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458 (535)
T ss_dssp TTCCCHHHH-------TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHT
T ss_pred eecCCCcee-------cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHH
Confidence 876532211 111345788999999984 58999999999999985
No 266
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.96 E-value=1.6e-30 Score=292.66 Aligned_cols=190 Identities=23% Similarity=0.338 Sum_probs=151.6
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC-CCCceEe
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDF-EGVDFKA 783 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~~~~ 783 (914)
.+|+..+.||+|+||+||+|++..+++ ||+|++...... ..+|+++++.++||||+++++++..... ....+.+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 479999999999999999999987766 888877533222 2369999999999999999999765432 3344578
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec-CCCcEEEecccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD-YDMVAHVGDFGL 862 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~-~~~~~ki~DFGl 862 (914)
+||||++++ +.+.+.... .....+++..+..++.|++.||+|||++ +|+||||||+|||++ .++.+||+|||+
T Consensus 115 lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 115 LVLEYVPET-VYRASRHYA--KLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEECCSEE-HHHHHHHHH--HTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeeccCcc-HHHHHHHHH--hhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 999999764 444333211 0125689999999999999999999999 999999999999999 789999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+...... ......||+.|+|||++. +.++||||+||++|||+
T Consensus 189 a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell 236 (394)
T 4e7w_A 189 AKILIAGE---------PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELM 236 (394)
T ss_dssp CEECCTTC---------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred cccccCCC---------CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence 98754321 112357999999999984 47899999999999873
No 267
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.96 E-value=1.5e-30 Score=308.61 Aligned_cols=190 Identities=22% Similarity=0.385 Sum_probs=153.9
Q ss_pred cccccC-cccCCccEEEEEEEEC--CCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 706 EFSSSN-MIGQGRFGTVYKGILG--DDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 706 ~~~~~~-~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++.+.+ .||+|+||.||+|+++ .++..||||+++... ....+.+.+|++++++++|||||+++++|.. +.
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~~ 409 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EA 409 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------SS
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------CC
Confidence 344444 7999999999999875 456789999997543 3456789999999999999999999999753 24
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++|+|.+++...+ ..+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 410 ~~lv~E~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFG 481 (613)
T 2ozo_A 410 LMLVMEMAGGGPLHKFLVGKR-----EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFG 481 (613)
T ss_dssp EEEEEECCTTCBHHHHHTTCT-----TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCS
T ss_pred eEEEEEeCCCCcHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeecc
Confidence 799999999999999997543 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+|+......... .......+|+.|||||++. +.++|||||||+++||+
T Consensus 482 la~~~~~~~~~~-----~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ell 533 (613)
T 2ozo_A 482 LSKALGADDSYY-----TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL 533 (613)
T ss_dssp TTTTCC-------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred CcccccCCCcee-----eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHH
Confidence 998764322110 1112234678999999995 58999999999999874
No 268
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.96 E-value=1.6e-30 Score=281.68 Aligned_cols=189 Identities=25% Similarity=0.412 Sum_probs=158.6
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|+..+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++... +..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 77 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-----NKL 77 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET-----TEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecC-----Cce
Confidence 57999999999999999999999999999999986443 23346888999999999999999999996543 478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
++||||++ ++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 78 ~lv~e~~~-~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~ 149 (299)
T 2r3i_A 78 YLVFEFLH-QDLKKFMDASAL----TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 149 (299)
T ss_dssp EEEEECCS-EEHHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTH
T ss_pred EEEEEccc-CCHHHHHHhhhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchh
Confidence 99999997 699999976532 4588899999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
++....... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 150 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~ 198 (299)
T 2r3i_A 150 ARAFGVPVR--------TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMV 198 (299)
T ss_dssp HHHHCCCSB--------CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred hhhccCCcc--------ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHH
Confidence 986542211 112346899999999984 47899999999999873
No 269
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.96 E-value=9.9e-31 Score=295.92 Aligned_cols=196 Identities=24% Similarity=0.313 Sum_probs=144.7
Q ss_pred hcccc-cCcccCCccEEEEEEEEC--CCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSS-SNMIGQGRFGTVYKGILG--DDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~-~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
+.|++ .++||+|+||.||+|+++ .+++.||||++... ...+.+.+|++++++++||||+++++++... ....
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~---~~~~ 94 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSH---ADRK 94 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEET---TTTE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecC---CCCe
Confidence 45665 558999999999999976 46789999998633 3346788999999999999999999997532 2457
Q ss_pred EeEEEecccCCCHHHHHhccCCc---ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee----cCCCc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQ---VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL----DYDMV 854 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~---~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl----~~~~~ 854 (914)
.++||||++ |+|.+++...+.. .....+++..+..++.||+.||+|||++ +|+||||||+|||+ +.++.
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCc
Confidence 899999996 5888887643210 1123589999999999999999999999 99999999999999 67789
Q ss_pred EEEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+||+|||+|+.+..... ........+||+.|+|||++. +.++||||+||++|||+
T Consensus 171 ~kl~Dfg~a~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell 230 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLK-----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 230 (405)
T ss_dssp EEECCTTCCC---------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCceecCCCCc-----ccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHH
Confidence 99999999987643211 111223467999999999984 47899999999999873
No 270
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.96 E-value=1.5e-30 Score=285.73 Aligned_cols=193 Identities=26% Similarity=0.404 Sum_probs=157.2
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEE--EEEEeecc-CCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCc
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVV--AVKVINLK-QKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v--avK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 780 (914)
++|++.+.||+|+||.||+|++..++..+ |+|.++.. .....+.+.+|+++++++ +||||+++++++.. .+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-----~~ 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-----RG 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-----TT
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee-----CC
Confidence 57999999999999999999998888755 99988643 233456789999999999 89999999999654 34
Q ss_pred eEeEEEecccCCCHHHHHhccCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQ----------VEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 850 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~ 850 (914)
..++||||+++|+|.+++...+.. .....+++.+++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG 176 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEc
Confidence 789999999999999999765310 0124689999999999999999999999 999999999999999
Q ss_pred CCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 851 YDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 851 ~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.++.+||+|||+++...... ......+|+.|+|||++. +.++|+||+||+++||+
T Consensus 177 ~~~~~kL~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell 235 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQEVYV---------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235 (327)
T ss_dssp GGGCEEECCTTCEESSCEEC---------CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEcccCcCccccccc---------cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHH
Confidence 99999999999997432211 112245789999999985 58999999999999873
No 271
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.96 E-value=2e-30 Score=283.35 Aligned_cols=191 Identities=28% Similarity=0.403 Sum_probs=158.1
Q ss_pred cccccCcccCCccEEEEEEEE----CCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 706 EFSSSNMIGQGRFGTVYKGIL----GDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
.|++.+.||+|+||.||+|.+ ..+++.||||+++... ....+.+.+|++++++++||||+++++++.... ..
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~ 108 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG---AA 108 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT---TT
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC---Cc
Confidence 348999999999999988765 3478999999997543 234567899999999999999999999976432 35
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||+++|+|.+++... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Df 178 (318)
T 3lxp_A 109 SLQLVMEYVPLGSLRDYLPRH-------SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDF 178 (318)
T ss_dssp EEEEEECCCTTCBHHHHGGGS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCG
T ss_pred eEEEEEecccCCcHHHHHhhC-------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCc
Confidence 789999999999999999753 488999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+++......... .......||+.|+|||++. +.++||||+||++++|+
T Consensus 179 g~a~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll 231 (318)
T 3lxp_A 179 GLAKAVPEGHEYY-----RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231 (318)
T ss_dssp GGCEECCTTCSEE-----EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccc-----ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHH
Confidence 9998765422110 1122346899999999995 47899999999999873
No 272
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.96 E-value=7e-31 Score=291.42 Aligned_cols=192 Identities=15% Similarity=0.213 Sum_probs=157.2
Q ss_pred hcccccCcccCCccEEEEEEEECC--------CcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcce----------
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGD--------DEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIK---------- 766 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 766 (914)
++|++.+.||+|+||.||+|++.. .++.||+|++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 689999999999999999999987 3789999998643 46789999999999999998
Q ss_pred -----EEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecC
Q 042766 767 -----IITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGD 841 (914)
Q Consensus 767 -----l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrD 841 (914)
+++++.. .....++||||+ +++|.+++.... ...+++.+++.++.|++.||+|||++ +|+|||
T Consensus 117 ~~i~~~~~~~~~----~~~~~~lv~e~~-~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~D 184 (352)
T 2jii_A 117 LAIPTCMGFGVH----QDKYRFLVLPSL-GRSLQSALDVSP----KHVLSERSVLQVACRLLDALEFLHEN---EYVHGN 184 (352)
T ss_dssp CSCCCCCEEEEE----TTTEEEEEEECC-CEEHHHHHHHSG----GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSC
T ss_pred cCccchhhcccc----CCcEEEEEecCC-CcCHHHHHHhCC----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCC
Confidence 4555432 235789999999 999999998652 25789999999999999999999999 999999
Q ss_pred CCCCCeeecCCC--cEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 842 LKPSNVLLDYDM--VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 842 lkp~NILl~~~~--~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||+||+++.++ .+||+|||+|+.+........ ..........||+.|+|||++. +.++|||||||++|||+
T Consensus 185 ikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 262 (352)
T 2jii_A 185 VTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVA-YVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWL 262 (352)
T ss_dssp CCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCC-CCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHEEEcCCCCceEEEecCcceeeccCCCcccc-ccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 999999999998 999999999987654322111 1111223457999999999985 48999999999999873
No 273
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=2.7e-32 Score=325.33 Aligned_cols=429 Identities=15% Similarity=0.093 Sum_probs=233.3
Q ss_pred cCCcccCCCCCCCeeecCCCCC---CCcCCCCcc------------ccCCcchhccCCCcccCCCChhcccc--cccccc
Q 042766 116 DIPQEIGNLFRLEKLALSNNSF---SGTIPTNLS------------RCSNLIHFCASNNKLEGQIPKEIGNL--LKLQRL 178 (914)
Q Consensus 116 ~~p~~~~~l~~L~~L~Ls~N~l---~~~~p~~l~------------~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L 178 (914)
.++..+..+++|++|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+..++.. .+|++|
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L 143 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETL 143 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEE
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEE
Confidence 3344556788899999987532 244554444 45566666666665554444444442 236666
Q ss_pred cccccc-ccC-cCCcccccccccceeecccCCCCCC----CCccchhhhcccccccccccccC----CCCCccccccccc
Q 042766 179 SVDINY-LTG-QLPDSVGNLSAIEVIRITENSLGGK----IPTTLGLLRRLVNLNVAENQFSG----MFPRSICNISSVE 248 (914)
Q Consensus 179 ~L~~N~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~ 248 (914)
+|++|. ++. .++....++++|++|+|++|.+++. ++..+..+++|++|++++|.+++ .++..+.
T Consensus 144 ~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~------ 217 (592)
T 3ogk_B 144 KLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR------ 217 (592)
T ss_dssp EEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHH------
T ss_pred ECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHh------
Confidence 665554 110 1112223445555555555554433 22223344445555555554441 1222233
Q ss_pred eeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCC---ccccccccccccccceec
Q 042766 249 LIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFK---GKVSIDFSSLKNLWLLNL 325 (914)
Q Consensus 249 ~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~---~~~~~~~~~l~~L~~L~L 325 (914)
++++|++|+|++|.+.+ +|..+..+++|+.|+++++... +..+..+..+++|+.|++
T Consensus 218 -------------------~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l 277 (592)
T 3ogk_B 218 -------------------NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGL 277 (592)
T ss_dssp -------------------HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEE
T ss_pred -------------------hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCc
Confidence 34444444444444442 3344444444444444432211 112223344445555555
Q ss_pred cCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcc
Q 042766 326 EQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLE 405 (914)
Q Consensus 326 ~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 405 (914)
+++.... +|..+..+++|++|+|++|.+++.....+....++|+.|+++++...+.++..+..+++|++|+|+
T Consensus 278 ~~~~~~~-------l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 278 SYMGPNE-------MPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp TTCCTTT-------GGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred cccchhH-------HHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEee
Confidence 4432111 333444555555555555554432222211222245555555222222233334566778888887
Q ss_pred -----------cCccccc-CChhhhcccCCceeeecccccccccCccccC-CCCCCeEEee----CCcCCCC-----CCC
Q 042766 406 -----------VNQFHGT-IPDVISELKNLQQLSVFNNFLRGGIPSGLGN-LTKLGSLDLG----SNSLQGN-----IPS 463 (914)
Q Consensus 406 -----------~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~p~ 463 (914)
.|.+++. ++..+..+++|++|+++.|.+++..+..++. +++|+.|+|+ .|.+++. ++.
T Consensus 351 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~ 430 (592)
T 3ogk_B 351 RGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRS 430 (592)
T ss_dssp CCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHH
T ss_pred cCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHH
Confidence 3566543 2333456788888888778877766666654 7778888886 5666643 222
Q ss_pred ccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCcccccc-ccccceeecccCCcccc-ccCcccccc
Q 042766 464 SLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVG-NLKNLVMLDISSNQFSG-VIPVTLSTC 541 (914)
Q Consensus 464 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~-~~p~~~~~l 541 (914)
.+.++++|+.|+++++. +.+++..+..++ .+++|++|+|++|++++ .++..+.++
T Consensus 431 ~~~~~~~L~~L~L~~~~-----------------------~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 487 (592)
T 3ogk_B 431 LLIGCKKLRRFAFYLRQ-----------------------GGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGC 487 (592)
T ss_dssp HHHHCTTCCEEEEECCG-----------------------GGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCC
T ss_pred HHHhCCCCCEEEEecCC-----------------------CCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcC
Confidence 34456666666665322 112222222332 37889999999999987 345556789
Q ss_pred ccccEEEeeccccccc-CCcchhccCCCCEEEccCCccccccCccc-cccCCCCeEeCCCC
Q 042766 542 VSLEYLDISINSFYGV-IPLSFRFLKSIKALNVSSNNLSGKIPEFL-ENLSFLEFLNLSYN 600 (914)
Q Consensus 542 ~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ls~N 600 (914)
++|++|+|++|.+++. ++..+..+++|++|+|++|++++.-...+ ..++.+....+..+
T Consensus 488 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 488 PNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp TTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred cccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 9999999999998765 34445689999999999999987644444 35666666655554
No 274
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.96 E-value=3.1e-30 Score=287.26 Aligned_cols=201 Identities=24% Similarity=0.282 Sum_probs=151.7
Q ss_pred HHHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC-
Q 042766 698 AELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDF- 776 (914)
Q Consensus 698 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 776 (914)
.......++|++.+.||+|+||.||+|++..+++.||||++... ........+|++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 44566778999999999999999999999999999999998643 3334567788899999999999999999865332
Q ss_pred -CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHH--hCCCCCcEecCCCCCCeeecC-C
Q 042766 777 -EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH--HHCQPPMVHGDLKPSNVLLDY-D 852 (914)
Q Consensus 777 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH--~~~~~~ivHrDlkp~NILl~~-~ 852 (914)
....+.++||||+++ ++.+.+..... ....+++..+..++.|++.|+.||| +. +|+||||||+||+++. +
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYR--RQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTT
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCC
Confidence 223357899999976 55554432110 1246888999999999999999999 77 9999999999999997 8
Q ss_pred CcEEEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 853 MVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 853 ~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+.+||+|||+|+...... ......||+.|+|||++. +.++||||+||++|+|+
T Consensus 169 ~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell 226 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSE---------PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM 226 (360)
T ss_dssp TEEEECCCTTCBCCCTTS---------CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred CcEEEeeCCCceecCCCC---------CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence 999999999998664321 112357999999999983 57899999999999873
No 275
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.96 E-value=1.1e-30 Score=286.73 Aligned_cols=197 Identities=23% Similarity=0.383 Sum_probs=155.7
Q ss_pred hhcccccCcccCCccEEEEEEE-----ECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGI-----LGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFE 777 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 777 (914)
.++|++.+.||+|+||.||+|+ ...+++.||||++.... .....++.+|+.++++++||||+++++++..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 104 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ---- 104 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC----
Confidence 4689999999999999999999 44567899999996432 3345678999999999999999999999643
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcc-cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC---CC
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQV-EVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY---DM 853 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~---~~ 853 (914)
....++||||+++|+|.+++....... ....+++.+++.++.|++.||.|||++ +|+||||||+||+++. +.
T Consensus 105 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~ 180 (327)
T 2yfx_A 105 -SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 180 (327)
T ss_dssp -SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred -CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcc
Confidence 346799999999999999998654211 124589999999999999999999999 9999999999999984 44
Q ss_pred cEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 854 VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 854 ~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
.+||+|||+++........ .......||+.|+|||++. +.++||||+||++++|+
T Consensus 181 ~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell 239 (327)
T 2yfx_A 181 VAKIGDFGMARDIYRASYY------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239 (327)
T ss_dssp CEEECCCHHHHHHHC------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred eEEECcccccccccccccc------ccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHH
Confidence 6999999999865332211 1122356899999999984 58999999999999873
No 276
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.96 E-value=1.5e-30 Score=309.20 Aligned_cols=184 Identities=27% Similarity=0.394 Sum_probs=151.0
Q ss_pred CcccCCccEEEEEEEE--CCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEeEEE
Q 042766 711 NMIGQGRFGTVYKGIL--GDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
+.||+|+||.||+|.+ ..+++.||||+++... ....+++.+|++++++++|||||++++++.. +..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA------ESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES------SSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------CCEEEEE
Confidence 4799999999999965 4567899999997542 3345789999999999999999999999742 2468999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
||+++|+|.+++... ..+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+
T Consensus 449 E~~~~g~L~~~l~~~------~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~ 519 (635)
T 4fl3_A 449 EMAELGPLNKYLQQN------RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519 (635)
T ss_dssp ECCTTEEHHHHHHHC------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHT
T ss_pred EccCCCCHHHHHhhC------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCcccc
Confidence 999999999999754 4688999999999999999999999 9999999999999999999999999999876
Q ss_pred cccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 867 SNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
...... ........||+.|+|||++. +.++|||||||++|||+
T Consensus 520 ~~~~~~-----~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ell 566 (635)
T 4fl3_A 520 RADENY-----YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 566 (635)
T ss_dssp TC------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ccCccc-----cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHH
Confidence 543211 11122345789999999995 58999999999999874
No 277
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.96 E-value=4.9e-31 Score=286.22 Aligned_cols=202 Identities=24% Similarity=0.313 Sum_probs=144.4
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCc
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 780 (914)
...++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++... +
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 86 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVK-----D 86 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESS-----S
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeec-----C
Confidence 34568999999999999999999998889999999986443 33456788999999999999999999996543 3
Q ss_pred eEeEEEecccCCCHHHHHhccCC--cccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 781 FKALVFEYMENGSLEDWLHQSND--QVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
..++||||+++++|.+++..... ......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 163 (303)
T 2vwi_A 87 ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIA 163 (303)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEE
Confidence 68999999999999999874210 01124689999999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|||+++........ ..........||+.|+|||++. +.++|+||+||++++|+
T Consensus 164 dfg~~~~~~~~~~~---~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~ 221 (303)
T 2vwi_A 164 DFGVSAFLATGGDI---TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELA 221 (303)
T ss_dssp CCHHHHHCC------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHH
T ss_pred eccchheeccCCCc---cchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHH
Confidence 99999865432110 0111122457999999999984 47899999999999873
No 278
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.96 E-value=3.4e-30 Score=282.72 Aligned_cols=195 Identities=25% Similarity=0.440 Sum_probs=161.9
Q ss_pred HhhcccccCcccCCccEEEEEEEEC-CCcEEEEEEEeeccC--CcchHHHHHHHHHHHhc---CCCCcceEEeEeecCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILG-DDEMVVAVKVINLKQ--KGASKSFVSECEALRNI---RHRNLIKIITICSSTDF 776 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~ 776 (914)
..++|++.+.||+|+||.||+|++. .+++.||+|+++... ......+.+|+++++++ +||||+++++++.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 4578999999999999999999995 678999999997433 22334677888887776 89999999999764333
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEE
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAH 856 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 856 (914)
+.....++||||++ |+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~k 160 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIK 160 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT----TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEE
Confidence 34567899999997 699999976532 3589999999999999999999999 999999999999999999999
Q ss_pred EecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 857 VGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 857 i~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+|||+++...... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 161 l~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 213 (326)
T 1blx_A 161 LADFGLARIYSFQM---------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213 (326)
T ss_dssp ECSCCSCCCCCGGG---------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred EecCcccccccCCC---------CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHH
Confidence 99999998654321 112357999999999984 58899999999999874
No 279
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.96 E-value=7.2e-30 Score=282.21 Aligned_cols=195 Identities=26% Similarity=0.350 Sum_probs=160.3
Q ss_pred HHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHh--cCCCCcceEEeEeecCCCC
Q 042766 700 LSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRN--IRHRNLIKIITICSSTDFE 777 (914)
Q Consensus 700 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~ 777 (914)
.....++|++.+.||+|+||.||+|++ +++.||||++... ..+.+.+|+++++. ++||||+++++++.... .
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~-~ 110 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-G 110 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC-S
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC-C
Confidence 344567899999999999999999998 4889999998533 34677889999887 78999999999976543 1
Q ss_pred CCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCcEecCCCCCCeee
Q 042766 778 GVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH--------HHCQPPMVHGDLKPSNVLL 849 (914)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH--------~~~~~~ivHrDlkp~NILl 849 (914)
.....++||||+++|+|.+++... .+++.+++.++.|++.|++||| +. +|+||||||+||++
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll 180 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILV 180 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEE
T ss_pred ccceeEEEEeecCCCcHHHHHhcc-------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEE
Confidence 123689999999999999999753 5889999999999999999999 66 99999999999999
Q ss_pred cCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhhh----------hhcccCcccccccccC
Q 042766 850 DYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM----------LYTHIPSFSCTNVHHF 914 (914)
Q Consensus 850 ~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~----------~~~Di~s~g~~~~~~f 914 (914)
+.++.+||+|||+++.......... .......||+.|+|||++.+ .++|||||||++|||+
T Consensus 181 ~~~~~~kL~Dfg~~~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~ 251 (342)
T 1b6c_B 181 KKNGTCCIADLGLAVRHDSATDTID----IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251 (342)
T ss_dssp CTTSCEEECCCTTCEEEETTTTEEE----ECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCceeccccccccc----cccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHH
Confidence 9999999999999986543221100 01123579999999999854 5899999999999873
No 280
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2e-29 Score=289.57 Aligned_cols=246 Identities=20% Similarity=0.221 Sum_probs=141.9
Q ss_pred CEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccc
Q 042766 104 RYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDIN 183 (914)
Q Consensus 104 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 183 (914)
+.++.++++++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 44455555554 4444333 35555555555555444555555555555555555555444455555555555555555
Q ss_pred cccCcCCcccccccccceeecccCCCCCCCCccchhhhccccccccc-ccccCCCCCccccccccceeeccCCcccCccc
Q 042766 184 YLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAE-NQFSGMFPRSICNISSVELIFLTENRFSGIFP 262 (914)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 262 (914)
++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++ |.+....+..|.++++|++|+|++|++++. |
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~ 212 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P 212 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c
Confidence 55544444455555555555555555544444555555555555555 333333334555666666666666666543 2
Q ss_pred ccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhh
Q 042766 263 FDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVI 342 (914)
Q Consensus 263 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 342 (914)
. +..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|+++..+. .
T Consensus 213 ~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~------~ 284 (452)
T 3zyi_A 213 N--LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPH------D 284 (452)
T ss_dssp C--CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT------T
T ss_pred c--ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccCh------H
Confidence 1 3356666677777776666666667777777777777777776666666666777777777776665532 2
Q ss_pred cccCCCCCcEEeccccccC
Q 042766 343 FLSNCSSLKVLSLSDNQFG 361 (914)
Q Consensus 343 ~l~~l~~L~~L~Ls~N~l~ 361 (914)
.+..+++|+.|+|++|.+.
T Consensus 285 ~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 285 LFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp SSTTCTTCCEEECCSSCEE
T ss_pred HhccccCCCEEEccCCCcC
Confidence 3455666666666666654
No 281
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.96 E-value=1.7e-30 Score=278.32 Aligned_cols=185 Identities=31% Similarity=0.414 Sum_probs=151.1
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceEe
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
.++|++.+.||+|+||.||+|++. ++.||||+++.. ...+.+.+|++++++++||||+++++++.. .....+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECC----C--CCE
T ss_pred hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEc----CCCceE
Confidence 468999999999999999999984 789999998643 355789999999999999999999998643 234678
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccc
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLA 863 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla 863 (914)
+||||+++++|.+++.... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 92 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 164 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRSRG----RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 164 (278)
T ss_dssp EEECCCTTEEHHHHHHHHH----HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred EEEecCCCCCHHHHHHhcc----cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccc
Confidence 9999999999999997542 13478899999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 864 KFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+...... ....+|+.|+|||++. +.++|+||+||++++|+
T Consensus 165 ~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 208 (278)
T 1byg_A 165 KEASSTQ-----------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 208 (278)
T ss_dssp ----------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccc-----------cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHH
Confidence 7543211 1235789999999985 58999999999999873
No 282
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.96 E-value=6.4e-30 Score=293.20 Aligned_cols=194 Identities=24% Similarity=0.349 Sum_probs=157.8
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCc-ceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNL-IKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~~~~~ 782 (914)
.++|++.+.||+|+||.||+|++..+++.||||++..... .+.+.+|+++++.++|++. ..+..++. .....
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~-----~~~~~ 78 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGV-----EGDYN 78 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEE-----ETTEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEe-----eCCEE
Confidence 3689999999999999999999999999999998864432 3457899999999987554 44444432 23478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee---cCCCcEEEec
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DYDMVAHVGD 859 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl---~~~~~~ki~D 859 (914)
++||||+ +++|.+++.... ..+++.+++.|+.||+.||+|||++ +||||||||+|||+ +.++.+||+|
T Consensus 79 ~lvme~~-g~sL~~ll~~~~-----~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~D 149 (483)
T 3sv0_A 79 VLVMDLL-GPSLEDLFNFCS-----RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIID 149 (483)
T ss_dssp EEEEECC-CCBHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECC
T ss_pred EEEEECC-CCCHHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEe
Confidence 9999999 999999997543 4689999999999999999999999 99999999999999 6889999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
||+|+.+....... ...........||+.|+|||++. +.++|||||||++|||+
T Consensus 150 FGla~~~~~~~~~~-~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~ell 207 (483)
T 3sv0_A 150 FGLAKKYRDTSTHQ-HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFL 207 (483)
T ss_dssp CTTCEECBCTTTCC-BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCcceeccCCcccc-ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHH
Confidence 99998765432111 11112223568999999999995 57899999999999874
No 283
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=5.3e-32 Score=294.88 Aligned_cols=250 Identities=19% Similarity=0.186 Sum_probs=187.5
Q ss_pred cCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcc-cCCCChhcc-------ccccccccccccccccCcCCcc
Q 042766 121 IGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKL-EGQIPKEIG-------NLLKLQRLSVDINYLTGQLPDS 192 (914)
Q Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~ 192 (914)
++..++|++|++++|.+ .+|..+... |++|+|++|++ .+.+|..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45667788888888888 677766655 88888888888 456777665 6788888888888888888877
Q ss_pred c--ccccccceeecccCCCCCCCCccchhh-----hcccccccccccccCCCCCccccccccceeeccCCcccCcc--cc
Q 042766 193 V--GNLSAIEVIRITENSLGGKIPTTLGLL-----RRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIF--PF 263 (914)
Q Consensus 193 ~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~ 263 (914)
+ +.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|..+++|++|+|++|++.+.+ |.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 5 7888888888888888876 7778877 78888888888888877788888888888888888876642 22
Q ss_pred c-ccccCcccceeeccCccCCCC---CCCccccccccccccccCccCCcccc-ccccccccccceeccCCcCCCCCCCCc
Q 042766 264 D-ILLNLPNLKKLGIGGNNFVGS---IPDSLSNASNLELLDLPSNQFKGKVS-IDFSSLKNLWLLNLEQNNLGTGTANDL 338 (914)
Q Consensus 264 ~-~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~ 338 (914)
. .+.++++|++|+|++|++++. ....+..+++|++|+|++|+|++.+| ..+..+++|++|+|++|.|+.++.
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~--- 270 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPK--- 270 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCS---
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhh---
Confidence 2 235778888888888888731 12334567788888888888887764 456667888888888888875432
Q ss_pred chhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccc
Q 042766 339 DFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISG 387 (914)
Q Consensus 339 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~ 387 (914)
.+. ++|++|+|++|++++. |. +..+. +|++|++++|.+++
T Consensus 271 ----~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~-~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 271 ----GLP--AKLSVLDLSYNRLDRN-PS-PDELP-QVGNLSLKGNPFLD 310 (312)
T ss_dssp ----SCC--SEEEEEECCSSCCCSC-CC-TTTSC-EEEEEECTTCTTTC
T ss_pred ----hcc--CCceEEECCCCCCCCC-hh-HhhCC-CCCEEeccCCCCCC
Confidence 233 6788888888888855 55 55554 68888888888775
No 284
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.96 E-value=3.4e-30 Score=284.52 Aligned_cols=192 Identities=22% Similarity=0.300 Sum_probs=157.0
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC-CcchHHHHHHHHH-HHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ-KGASKSFVSECEA-LRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|+..+.||+|+||.||+|++..+++.||||+++... .....++..|..+ ++.++||||+++++++... +.
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~-----~~ 124 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE-----GD 124 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECS-----SC
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeC-----Cc
Confidence 467899999999999999999999999999999997543 2334456666665 7788999999999996543 47
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++ +|.+++..... ....+++..+..++.|++.||+|||++. +|+||||||+||+++.++.+||+|||
T Consensus 125 ~~lv~e~~~~-~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg 199 (340)
T 3an0_A 125 VWICMELMDT-SLDKFYKQVID--KGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFG 199 (340)
T ss_dssp EEEEECCCSE-EHHHHHHHHHH--TSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCS
T ss_pred EEEEHHHhhC-cHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCC
Confidence 8999999975 99998864210 1257899999999999999999999742 89999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchh--------hhhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF--------FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~--------~~~~~Di~s~g~~~~~~f 914 (914)
+++...... ......||+.|+|||++ ++.++||||+||++|||+
T Consensus 200 ~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~ 251 (340)
T 3an0_A 200 ISGYLVDSV---------AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 251 (340)
T ss_dssp HHHHHSCHH---------HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHH
T ss_pred Cceeccccc---------ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHH
Confidence 998654321 11224699999999996 357999999999999873
No 285
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3.4e-29 Score=287.60 Aligned_cols=252 Identities=21% Similarity=0.228 Sum_probs=182.0
Q ss_pred cEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecc
Q 042766 351 KVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFN 430 (914)
Q Consensus 351 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 430 (914)
..++.+++.++ .+|..+. .+++.|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 57 ~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP---SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred cEEEECCCCcC-ccCCCCC---CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 34444444444 3443332 2455566666666665666666666666666666666666666666666666666666
Q ss_pred cccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCchh-hhcccchhhhhcccCCccCCC
Q 042766 431 NFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQ-LLSITTLSLVLDLSNNLLNGS 509 (914)
Q Consensus 431 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~l~~~L~Ls~N~l~~~ 509 (914)
|+|++..+..|..+++|++|+|++|++++..+..|.++++|+.|++++|+..+.+|.. +..+..+ ++|+|++|++++.
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L-~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNL-KYLNLGMCNIKDM 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTC-CEEECTTSCCSSC
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCC-CEEECCCCccccc
Confidence 6666555555666666666666666666555556666666666666664333344443 3444444 6667777777643
Q ss_pred ccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCcccccc
Q 042766 510 LPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENL 589 (914)
Q Consensus 510 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 589 (914)
| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..++.+..+
T Consensus 212 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 212 -P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp -C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred -c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 3 47788999999999999999999999999999999999999999999999999999999999999998888899999
Q ss_pred CCCCeEeCCCCccccccCCC
Q 042766 590 SFLEFLNLSYNYFEGEVPVK 609 (914)
Q Consensus 590 ~~L~~L~ls~N~l~~~~p~~ 609 (914)
++|+.|+|++|+|.|+|...
T Consensus 290 ~~L~~L~L~~Np~~CdC~~~ 309 (452)
T 3zyi_A 290 RYLVELHLHHNPWNCDCDIL 309 (452)
T ss_dssp TTCCEEECCSSCEECSTTTH
T ss_pred cCCCEEEccCCCcCCCCCch
Confidence 99999999999999998865
No 286
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.96 E-value=2.3e-30 Score=286.91 Aligned_cols=187 Identities=22% Similarity=0.346 Sum_probs=159.2
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc---ch--------------HHHHHHHHHHHhcCCCCcce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG---AS--------------KSFVSECEALRNIRHRNLIK 766 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~--------------~~~~~E~~~l~~l~h~niv~ 766 (914)
.++|++.+.||+|+||.||+|++ +++.||||++...... .. +.+.+|++++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 46899999999999999999999 7899999999743211 11 78999999999999999999
Q ss_pred EEeEeecCCCCCCceEeEEEecccCCCHHHH------HhccCCcccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCcEe
Q 042766 767 IITICSSTDFEGVDFKALVFEYMENGSLEDW------LHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH-HCQPPMVH 839 (914)
Q Consensus 767 l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~-~~~~~ivH 839 (914)
+++++.. .+..++||||+++|+|.++ +.... ...+++..+..++.|++.|++|||+ . +|+|
T Consensus 108 ~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H 175 (348)
T 2pml_X 108 CEGIITN-----YDEVYIIYEYMENDSILKFDEYFFVLDKNY----TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICH 175 (348)
T ss_dssp CSEEEES-----SSEEEEEEECCTTCBSSEESSSEESSCSSS----CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred EEEEEee-----CCeEEEEEeccCCCcHHHHHHHhhhhhhcc----ccCCCHHHHHHHHHHHHHHHHHHhccC---CEee
Confidence 9999654 3478999999999999998 44321 2578999999999999999999999 8 9999
Q ss_pred cCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhhh------hhcccCccccccccc
Q 042766 840 GDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM------LYTHIPSFSCTNVHH 913 (914)
Q Consensus 840 rDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~------~~~Di~s~g~~~~~~ 913 (914)
|||||+||+++.++.+||+|||.++..... ......||+.|+|||++.+ .++|+||+||+++||
T Consensus 176 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l 245 (348)
T 2pml_X 176 RDVKPSNILMDKNGRVKLSDFGESEYMVDK----------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM 245 (348)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCEECBTT----------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHH
T ss_pred cCCChHhEEEcCCCcEEEeccccccccccc----------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHH
Confidence 999999999999999999999999865432 1123569999999999853 389999999999987
Q ss_pred C
Q 042766 914 F 914 (914)
Q Consensus 914 f 914 (914)
+
T Consensus 246 ~ 246 (348)
T 2pml_X 246 F 246 (348)
T ss_dssp H
T ss_pred H
Confidence 3
No 287
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=4.1e-29 Score=285.95 Aligned_cols=253 Identities=21% Similarity=0.217 Sum_probs=191.5
Q ss_pred cEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecc
Q 042766 351 KVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFN 430 (914)
Q Consensus 351 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 430 (914)
+.++.+++.++ .+|..+. .+++.|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 46 ~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS---TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC---TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CEEEeCCCCcC-cCCCCCC---CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 44555555555 4554433 2456666666666666666677777777777777777766666677777777777777
Q ss_pred cccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCch-hhhcccchhhhhcccCCccCCC
Q 042766 431 NFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQ-QLLSITTLSLVLDLSNNLLNGS 509 (914)
Q Consensus 431 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~l~~~L~Ls~N~l~~~ 509 (914)
|+|++..+..|..+++|++|+|++|++++..+..|.++++|+.|++++|+..+.+|. .+..+..+ ++|+|++|.++ .
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L-~~L~L~~n~l~-~ 199 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNL-RYLNLAMCNLR-E 199 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSC-CEEECTTSCCS-S
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhccccc-CeecCCCCcCc-c
Confidence 777755555666777777777777777666666667777777777776444334444 34445555 67777777777 3
Q ss_pred ccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCcccccc
Q 042766 510 LPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENL 589 (914)
Q Consensus 510 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 589 (914)
+| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|+|++..+..+..+
T Consensus 200 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 200 IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 44 47889999999999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred CCCCeEeCCCCccccccCCCC
Q 042766 590 SFLEFLNLSYNYFEGEVPVKG 610 (914)
Q Consensus 590 ~~L~~L~ls~N~l~~~~p~~~ 610 (914)
++|+.|+|++|+|.|+|...+
T Consensus 279 ~~L~~L~L~~Np~~CdC~l~~ 299 (440)
T 3zyj_A 279 HHLERIHLHHNPWNCNCDILW 299 (440)
T ss_dssp TTCCEEECCSSCEECSSTTHH
T ss_pred cCCCEEEcCCCCccCCCCchH
Confidence 999999999999999987653
No 288
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.96 E-value=3.6e-30 Score=290.78 Aligned_cols=191 Identities=23% Similarity=0.347 Sum_probs=158.0
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC--------CCCcceEEeEeecCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR--------HRNLIKIITICSSTD 775 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~~~~ 775 (914)
.++|++.+.||+|+||+||+|++..+++.||||+++.. ....+.+.+|++++++++ |+||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 36799999999999999999999999999999999633 334567889999999985 788999999865321
Q ss_pred CCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCC--
Q 042766 776 FEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDM-- 853 (914)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~-- 853 (914)
......++||||+ ++++.+++..... ..+++.+++.++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 115 -~~~~~~~lv~e~~-~~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 115 -VNGTHICMVFEVL-GHHLLKWIIKSNY----QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp -TTEEEEEEEECCC-CCBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHH
T ss_pred -CCCceEEEEEecc-CccHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchh
Confidence 1345789999999 6677776654421 46899999999999999999999853 799999999999999775
Q ss_pred -----------------------------------------------cEEEecccccccccccccccccCCCCccccccC
Q 042766 854 -----------------------------------------------VAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKG 886 (914)
Q Consensus 854 -----------------------------------------------~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~G 886 (914)
.+||+|||+|+..... ....+|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----------~~~~~g 255 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----------FTEDIQ 255 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----------SCSCCS
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----------CccCCC
Confidence 7999999999865321 113479
Q ss_pred cccccccchhh----hhhcccCcccccccccC
Q 042766 887 TVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 887 T~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|+.|||||++. +.++||||+||++|||+
T Consensus 256 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell 287 (397)
T 1wak_A 256 TRQYRSLEVLIGSGYNTPADIWSTACMAFELA 287 (397)
T ss_dssp CGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHH
T ss_pred CCcccCChhhcCCCCCcHHHHHHHHHHHHHHh
Confidence 99999999995 58899999999999873
No 289
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.96 E-value=4.2e-30 Score=277.12 Aligned_cols=191 Identities=27% Similarity=0.374 Sum_probs=149.8
Q ss_pred hcccccCcccCCccEEEEEEEECC-C--cEEEEEEEeecc---CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGD-D--EMVVAVKVINLK---QKGASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~-~--~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
++|++.+.||+|+||.||+|++.. + +..||||+++.. .....+.+.+|++++++++||||+++++++...
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 93 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP---- 93 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC----
Confidence 589999999999999999998642 2 347999998644 233457889999999999999999999986432
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
..++||||+++++|.+++.... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+
T Consensus 94 --~~~~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~ 163 (291)
T 1u46_A 94 --PMKMVTELAPLGSLLDRLRKHQ-----GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIG 163 (291)
T ss_dssp --SCEEEEECCTTCBHHHHHHHHG-----GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEEC
T ss_pred --CceeeEecccCCCHHHHHHhcc-----CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEc
Confidence 2689999999999999997643 4688999999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||+++......... .......||+.|+|||++. +.++|+||+||++++|+
T Consensus 164 Dfg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 218 (291)
T 1u46_A 164 DFGLMRALPQNDDHY-----VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 218 (291)
T ss_dssp CCTTCEECCC-CCEE-----EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccch-----hhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHH
Confidence 999998764322110 1112346888999999995 47899999999999873
No 290
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.96 E-value=4.6e-30 Score=286.78 Aligned_cols=188 Identities=23% Similarity=0.321 Sum_probs=155.3
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC-CCCc
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDF-EGVD 780 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~ 780 (914)
.++|...+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++..... ....
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 358999999999999999999999999999999997433 2234688899999999999999999999764431 1112
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..++||||++ ++|.+++. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 121 ~~~lv~e~~~-~~l~~~~~--------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Df 188 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG--------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDF 188 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT--------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECST
T ss_pred eEEEEEcccc-ccHHHHhh--------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEec
Confidence 3489999996 68888774 3488999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
|+|+..... .....||+.|+|||++. +.++|+||+||++++|+
T Consensus 189 g~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~ 236 (371)
T 4exu_A 189 GLARHADAE-----------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML 236 (371)
T ss_dssp TCC-------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHH
T ss_pred CcccccccC-----------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHH
Confidence 999854321 12357899999999874 57899999999999873
No 291
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.96 E-value=4e-30 Score=277.18 Aligned_cols=191 Identities=21% Similarity=0.276 Sum_probs=146.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-c-chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-G-ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|++.+.||+|+||.||+|++..+++.||+|+++.... . ..+.+.+|...++.++||||+++++++.. .+.
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-----~~~ 80 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-----EGD 80 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SSS
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec-----cCC
Confidence 4689999999999999999999999999999999964422 1 22334455556888899999999999654 346
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||++ |+|.+++..... ....+++..+..++.|++.|++|||+++ +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T 3fme_A 81 VWICMELMD-TSLDKFYKQVID--KGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFG 155 (290)
T ss_dssp EEEEEECCS-EEHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-
T ss_pred EEEEEehhc-cchHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecC
Confidence 899999997 588887764211 1257899999999999999999999842 89999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchh--------hhhhcccCccccccccc
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF--------FMLYTHIPSFSCTNVHH 913 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~--------~~~~~Di~s~g~~~~~~ 913 (914)
+|+...... ......||+.|+|||++ ++.++|+||+||++++|
T Consensus 156 ~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l 206 (290)
T 3fme_A 156 ISGYLVDDV---------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206 (290)
T ss_dssp -----------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHH
T ss_pred Ccccccccc---------cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHH
Confidence 998654321 11224699999999996 25799999999999987
No 292
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.96 E-value=1.1e-29 Score=273.21 Aligned_cols=190 Identities=27% Similarity=0.349 Sum_probs=162.1
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
...++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. .
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 93 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-----S 93 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----S
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC-----C
Confidence 34568999999999999999999999899999999997442 3456789999999999999999999999654 3
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC---CcEE
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD---MVAH 856 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~---~~~k 856 (914)
...++||||+++++|.+++... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.+ +.+|
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~k 164 (287)
T 2wei_A 94 SSFYIVGELYTGGELFDEIIKR------KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIK 164 (287)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CeEEEEEEccCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEE
Confidence 4789999999999999988754 3688999999999999999999999 99999999999999764 4799
Q ss_pred EecccccccccccccccccCCCCccccccCcccccccchhh---hhhcccCcccccccccC
Q 042766 857 VGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 857 i~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---~~~~Di~s~g~~~~~~f 914 (914)
|+|||+++...... ......||+.|+|||++. +.++|+||+||++++|+
T Consensus 165 L~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~ 216 (287)
T 2wei_A 165 IIDFGLSTCFQQNT---------KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILL 216 (287)
T ss_dssp ECSTTGGGTBCCCS---------SCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHH
T ss_pred EeccCcceeecCCC---------ccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHH
Confidence 99999998654321 112346899999999985 47899999999999873
No 293
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.96 E-value=5.1e-30 Score=280.42 Aligned_cols=188 Identities=22% Similarity=0.291 Sum_probs=159.9
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc------chHHHHHHHHHHHhcC--CCCcceEEeEeecC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG------ASKSFVSECEALRNIR--HRNLIKIITICSST 774 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~ 774 (914)
..++|++.+.||+|+||.||+|++..+++.||||+++..... ..+.+.+|++++++++ ||||+++++++..
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~- 119 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER- 119 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC-
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec-
Confidence 456899999999999999999999999999999999754321 2346678999999996 5999999999654
Q ss_pred CCCCCceEeEEEecccC-CCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec-CC
Q 042766 775 DFEGVDFKALVFEYMEN-GSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD-YD 852 (914)
Q Consensus 775 ~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~-~~ 852 (914)
.+..++||||+.+ ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++ .+
T Consensus 120 ----~~~~~lv~e~~~~~~~L~~~l~~~------~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~ 186 (320)
T 3a99_A 120 ----PDSFVLILERPEPVQDLFDFITER------GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNR 186 (320)
T ss_dssp ----SSEEEEEEECCSSEEEHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTT
T ss_pred ----CCcEEEEEEcCCCCccHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCC
Confidence 3478999999976 8999999764 4688999999999999999999999 999999999999999 78
Q ss_pred CcEEEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 853 MVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 853 ~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+.+||+|||+++...... .....||+.|+|||++. +.++|||||||+++||+
T Consensus 187 ~~~kL~Dfg~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~ 243 (320)
T 3a99_A 187 GELKLIDFGSGALLKDTV----------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 243 (320)
T ss_dssp TEEEECCCTTCEECCSSC----------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeeCcccccccccc----------ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHH
Confidence 999999999998764321 12346999999999985 47789999999999874
No 294
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.96 E-value=6.5e-30 Score=282.00 Aligned_cols=186 Identities=22% Similarity=0.353 Sum_probs=157.0
Q ss_pred hhcccccCcccCCccEEEEEEEE-CCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCC------cceEEeEeecCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGIL-GDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRN------LIKIITICSSTDF 776 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 776 (914)
.++|++.+.||+|+||.||+|++ ..+++.||||+++.. ....+.+.+|++++++++|++ ++++++++..
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~--- 88 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH--- 88 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE---
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc---
Confidence 35899999999999999999998 568899999998633 234567889999999987654 9999998643
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC-----
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY----- 851 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~----- 851 (914)
.+..++||||+ +++|.+++...+. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 89 --~~~~~lv~e~~-~~~l~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 158 (339)
T 1z57_A 89 --HGHICIVFELL-GLSTYDFIKENGF----LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTE 158 (339)
T ss_dssp --TTEEEEEEECC-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEE
T ss_pred --CCcEEEEEcCC-CCCHHHHHHhcCC----CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEecccccc
Confidence 34889999999 8899999976532 4688999999999999999999999 9999999999999987
Q ss_pred --------------CCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 852 --------------DMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 852 --------------~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
++.+||+|||+++..... .....||+.|+|||++. +.++||||+||++|||
T Consensus 159 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el 227 (339)
T 1z57_A 159 AYNPKIKRDERTLINPDIKVVDFGSATYDDEH-----------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEY 227 (339)
T ss_dssp EEC----CEEEEESCCCEEECCCSSCEETTSC-----------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHH
T ss_pred ccCCccccccccccCCCceEeeCcccccCccc-----------cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHH
Confidence 668999999999864321 12357999999999985 5899999999999987
Q ss_pred C
Q 042766 914 F 914 (914)
Q Consensus 914 f 914 (914)
+
T Consensus 228 ~ 228 (339)
T 1z57_A 228 Y 228 (339)
T ss_dssp H
T ss_pred H
Confidence 3
No 295
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.96 E-value=3.5e-30 Score=280.79 Aligned_cols=191 Identities=25% Similarity=0.300 Sum_probs=154.3
Q ss_pred HHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC------cchHHHHHHHHHHHhc----CCCCcceEEe
Q 042766 700 LSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK------GASKSFVSECEALRNI----RHRNLIKIIT 769 (914)
Q Consensus 700 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l~~ 769 (914)
.....++|++.+.||+|+||.||+|++..+++.||||+++.... .....+.+|+.+++++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 34456789999999999999999999998999999999964432 1233566799999998 8999999999
Q ss_pred EeecCCCCCCceEeEEEec-ccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCee
Q 042766 770 ICSSTDFEGVDFKALVFEY-MENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVL 848 (914)
Q Consensus 770 ~~~~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NIL 848 (914)
++. ..+..++|||| +++++|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+
T Consensus 106 ~~~-----~~~~~~~v~e~~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil 171 (312)
T 2iwi_A 106 WFE-----TQEGFMLVLERPLPAQDLFDYITEK------GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENIL 171 (312)
T ss_dssp EC----------CEEEEECCSSEEEHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEE
T ss_pred EEe-----cCCeEEEEEEecCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEE
Confidence 853 33467899999 7899999999764 3689999999999999999999999 9999999999999
Q ss_pred ec-CCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 849 LD-YDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 849 l~-~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
++ .++.+||+|||+++...... .....||+.|+|||++. +.++|+||+||++++|+
T Consensus 172 ~~~~~~~~kl~dfg~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~ 233 (312)
T 2iwi_A 172 IDLRRGCAKLIDFGSGALLHDEP----------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMV 233 (312)
T ss_dssp EETTTTEEEECCCSSCEECCSSC----------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCeEEEEEcchhhhcccCc----------ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHH
Confidence 99 88999999999998764321 12356999999999985 35899999999999873
No 296
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.96 E-value=5.1e-30 Score=309.08 Aligned_cols=185 Identities=23% Similarity=0.330 Sum_probs=156.0
Q ss_pred hcccccCcccCCccEEEEEEEECC-CcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGD-DEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|++.+.||+|+||+||+|++.. +++.||||++.... ....+.+.+|++++++++||||+++++++......+....
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 689999999999999999999975 78999999986432 2344678899999999999999999999876543333346
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecccc
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGL 862 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGl 862 (914)
|+||||++|++|.+++.. .+++.+++.|+.||+.||.|||++ +||||||||+|||++.+ .+||+|||+
T Consensus 160 ~lv~E~~~g~~L~~~~~~--------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ--------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEECCCCEECC----C--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred EEEEEeCCCCcHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 999999999999987652 589999999999999999999999 99999999999999886 899999999
Q ss_pred cccccccccccccCCCCccccccCcccccccchhh---hhhcccCccccccccc
Q 042766 863 AKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---~~~~Di~s~g~~~~~~ 913 (914)
++..... ....||+.|||||++. +.++|||||||++++|
T Consensus 228 a~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l 269 (681)
T 2pzi_A 228 VSRINSF------------GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAAL 269 (681)
T ss_dssp CEETTCC------------SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHH
T ss_pred chhcccC------------CccCCCccccCHHHHcCCCCCceehhhhHHHHHHH
Confidence 9865321 2357999999999986 4789999999999986
No 297
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=8.4e-29 Score=283.34 Aligned_cols=242 Identities=20% Similarity=0.202 Sum_probs=143.8
Q ss_pred CCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCC
Q 042766 85 SSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQ 164 (914)
Q Consensus 85 ~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 164 (914)
.+.+++ .+|..+. +.+++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++.
T Consensus 51 ~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~ 127 (440)
T 3zyj_A 51 VRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTI 127 (440)
T ss_dssp CSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSC
T ss_pred CCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCee
Confidence 334443 3454443 5667777777777766666777777777777777777655556666666666666666666644
Q ss_pred CChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccc
Q 042766 165 IPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNI 244 (914)
Q Consensus 165 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 244 (914)
.+..|..+++|++|+|++|++++..+..|.++++|++|+|++|+ .+....+..|.++
T Consensus 128 ~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~-----------------------~l~~i~~~~~~~l 184 (440)
T 3zyj_A 128 PNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK-----------------------RLSYISEGAFEGL 184 (440)
T ss_dssp CTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCT-----------------------TCCEECTTTTTTC
T ss_pred CHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCC-----------------------CcceeCcchhhcc
Confidence 44456666666666666666664444455555555555555532 2222222344444
Q ss_pred cccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCcccccccccccccccee
Q 042766 245 SSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLN 324 (914)
Q Consensus 245 ~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 324 (914)
++|++|+|++|+++.. |. +..+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+..|.++++|++|+
T Consensus 185 ~~L~~L~L~~n~l~~~-~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 261 (440)
T 3zyj_A 185 SNLRYLNLAMCNLREI-PN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEIN 261 (440)
T ss_dssp SSCCEEECTTSCCSSC-CC--CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEE
T ss_pred cccCeecCCCCcCccc-cc--cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEE
Confidence 4455555555544422 21 33556666666666666666666666666666777777766666666666666666666
Q ss_pred ccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccC
Q 042766 325 LEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFG 361 (914)
Q Consensus 325 L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 361 (914)
|++|+++..+. ..+..+++|+.|+|++|.+.
T Consensus 262 L~~N~l~~~~~------~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 262 LAHNNLTLLPH------DLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTSCCCCCCT------TTTSSCTTCCEEECCSSCEE
T ss_pred CCCCCCCccCh------hHhccccCCCEEEcCCCCcc
Confidence 66666665532 23456666666666666654
No 298
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.96 E-value=1.4e-29 Score=278.86 Aligned_cols=188 Identities=23% Similarity=0.321 Sum_probs=139.0
Q ss_pred hhcccccC-cccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHH-HHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSN-MIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECE-ALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~-~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|.+.+ .||+|+||.||+|+++.+++.||||++... ....+|+. .++.++||||+++++++.... .....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~ 100 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMH-HGKRC 100 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhcc-CCCce
Confidence 45788854 699999999999999999999999998532 22233333 456779999999999875422 22446
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC---CCcEEEe
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY---DMVAHVG 858 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~---~~~~ki~ 858 (914)
.++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~----~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGD----QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-C----CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeccCCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEe
Confidence 8999999999999999986532 4689999999999999999999999 9999999999999986 4569999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchh----hhhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF----FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~----~~~~~Di~s~g~~~~~~f 914 (914)
|||+++...... .....||+.|+|||++ ++.++||||+||++|+|+
T Consensus 174 Dfg~~~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 223 (336)
T 3fhr_A 174 DFGFAKETTQNA----------LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 223 (336)
T ss_dssp CCTTCEEC--------------------------------CHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceeccccc----------cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHH
Confidence 999998654221 1235689999999998 468999999999999873
No 299
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.9e-29 Score=269.63 Aligned_cols=250 Identities=24% Similarity=0.214 Sum_probs=186.9
Q ss_pred cEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecc
Q 042766 351 KVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFN 430 (914)
Q Consensus 351 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 430 (914)
+.++.+++.++ .+|..+ ..++++|++++|.+++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 14 ~~~~c~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 67788888887 566543 33677788888887777777777777778888877777777777777777777777777
Q ss_pred cc-cccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCC
Q 042766 431 NF-LRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGS 509 (914)
Q Consensus 431 N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~ 509 (914)
|. +++..|..|..+++|++|+|++|++++..|..+.++++|+.|++++|+++ +.
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-------------------------~~ 144 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-------------------------AL 144 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-------------------------CC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc-------------------------cc
Confidence 76 66555677777777777777777777766777777777766666666554 34
Q ss_pred ccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCcccccc
Q 042766 510 LPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENL 589 (914)
Q Consensus 510 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 589 (914)
.+..|+.+++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|..+++|+.|++++|++++..+..+..+
T Consensus 145 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 224 (285)
T 1ozn_A 145 PDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPL 224 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTC
T ss_pred CHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccC
Confidence 44556777888888888888887777778888888888888888888888888888888888888888887777778888
Q ss_pred CCCCeEeCCCCccccccCCCCcCCCCCccCccCCCCCCCC
Q 042766 590 SFLEFLNLSYNYFEGEVPVKGVFSNKTKISLHGNVKLCGG 629 (914)
Q Consensus 590 ~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~ 629 (914)
++|+.|++++|++.|.++..+....+.......+...|..
T Consensus 225 ~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~ 264 (285)
T 1ozn_A 225 RALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSL 264 (285)
T ss_dssp TTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEE
T ss_pred cccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCC
Confidence 8888888888888888776543333333444555555554
No 300
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.96 E-value=1.4e-29 Score=302.16 Aligned_cols=190 Identities=23% Similarity=0.381 Sum_probs=157.1
Q ss_pred HhhcccccCcccCCccEEEEEEEECC---CcEEEEEEEeeccC-CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGD---DEMVVAVKVINLKQ-KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEG 778 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 778 (914)
..++|++.+.||+|+||.||+|++.. .+..||||+++... ....+.+.+|+.++++++||||+++++++..
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----- 462 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE----- 462 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----
Confidence 34689999999999999999999864 35689999986433 2334688999999999999999999998632
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEe
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVG 858 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 858 (914)
+..++||||+++|+|.+++...+ ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 463 -~~~~lv~E~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~ 533 (656)
T 2j0j_A 463 -NPVWIIMELCTLGELRSFLQVRK-----FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLG 533 (656)
T ss_dssp -SSCEEEEECCTTCBHHHHHHHTT-----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEEC
T ss_pred -CceEEEEEcCCCCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEE
Confidence 24789999999999999997643 4689999999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
|||+|+........ ......||+.|||||++. +.++|||||||+++||
T Consensus 534 DFG~a~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el 585 (656)
T 2j0j_A 534 DFGLSRYMEDSTYY-------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 585 (656)
T ss_dssp CCCCCCSCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ecCCCeecCCCcce-------eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHH
Confidence 99999876432211 112345789999999985 5889999999999986
No 301
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.96 E-value=7.5e-30 Score=283.31 Aligned_cols=187 Identities=24% Similarity=0.325 Sum_probs=154.6
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCC-CCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDF-EGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~~ 781 (914)
++|...+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.++++++||||+++++++..... .....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 57999999999999999999999999999999996432 2234678899999999999999999999754321 11123
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||++ ++|.+++. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 104 ~~lv~e~~~-~~l~~~~~--------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg 171 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG--------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 171 (353)
T ss_dssp CEEEEECCS-EEGGGTTT--------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred EEEEecccc-CCHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecc
Confidence 589999997 58887764 3488999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhh-----hhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----~~~~Di~s~g~~~~~~f 914 (914)
+++..... .....||+.|+|||++. +.++|+||+||++++|+
T Consensus 172 ~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~ 218 (353)
T 3coi_A 172 LARHADAE-----------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML 218 (353)
T ss_dssp CTTC-------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHH
T ss_pred cccCCCCC-----------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHH
Confidence 99864321 12357899999999874 47899999999999873
No 302
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.96 E-value=1.9e-29 Score=283.05 Aligned_cols=189 Identities=25% Similarity=0.317 Sum_probs=156.5
Q ss_pred HhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC-CC-----CcceEEeEeecCCC
Q 042766 703 ATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR-HR-----NLIKIITICSSTDF 776 (914)
Q Consensus 703 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~ 776 (914)
..++|++.+.||+|+||+||+|++..+++.||||+++.. ....+.+.+|+++++.++ |+ +|+++++++...
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~-- 128 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR-- 128 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET--
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC--
Confidence 457899999999999999999999999999999999632 233467788999998885 55 389999886543
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec--CCCc
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD--YDMV 854 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~--~~~~ 854 (914)
...++||||++ |+|.+++..... ..+++..+..++.|++.||.|||++ ..+||||||||+|||++ .++.
T Consensus 129 ---~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~ 199 (382)
T 2vx3_A 129 ---NHLCLVFEMLS-YNLYDLLRNTNF----RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSA 199 (382)
T ss_dssp ---TEEEEEEECCC-CBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCC
T ss_pred ---CceEEEEecCC-CCHHHHHhhcCc----CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCc
Confidence 47899999996 599999986532 4589999999999999999999952 23899999999999995 4788
Q ss_pred EEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 855 AHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 855 ~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
+||+|||+|+..... .....||+.|+|||++. +.++||||+||++|||+
T Consensus 200 ~kL~DFG~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 252 (382)
T 2vx3_A 200 IKIVDFGSSCQLGQR-----------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMH 252 (382)
T ss_dssp EEECCCTTCEETTCC-----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred EEEEeccCceecccc-----------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHH
Confidence 999999999865321 12357999999999995 58999999999999874
No 303
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.96 E-value=4.2e-30 Score=281.08 Aligned_cols=193 Identities=23% Similarity=0.351 Sum_probs=154.4
Q ss_pred HHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 702 KATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 702 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
...++|++.+.||+|+||.||+|++.. .||+|+++... ....+.+.+|+.++++++||||+++++++...
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 101 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP----- 101 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS-----
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC-----
Confidence 345789999999999999999999864 38999987442 23345678899999999999999999997543
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
...++||||+++++|.+++...+ ..+++.+++.++.|++.|++|||++ +|+||||||+||+++ ++.+||+|
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~D 172 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRDAK-----IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITD 172 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTSSC-----CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECC
T ss_pred CceEEEeecccCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEee
Confidence 36899999999999999997643 4688899999999999999999999 999999999999998 67999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh-------------hhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------------~~~~Di~s~g~~~~~~f 914 (914)
||+++........ ..........||+.|+|||++. +.++||||+||+++||+
T Consensus 173 fg~~~~~~~~~~~---~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~ 237 (319)
T 2y4i_B 173 FGLFSISGVLQAG---RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELH 237 (319)
T ss_dssp CSCCC-------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHH
T ss_pred cCCcccccccccc---ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHH
Confidence 9998765322111 1111222456999999999984 57899999999999873
No 304
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.95 E-value=2.5e-29 Score=279.22 Aligned_cols=186 Identities=22% Similarity=0.346 Sum_probs=155.1
Q ss_pred hhcccccCcccCCccEEEEEEEECCCc-EEEEEEEeeccCCcchHHHHHHHHHHHhcCCCC------cceEEeEeecCCC
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDE-MVVAVKVINLKQKGASKSFVSECEALRNIRHRN------LIKIITICSSTDF 776 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 776 (914)
.++|++.+.||+|+||+||+|++..++ +.||+|+++.. ....+.+.+|++++++++|++ ++.+++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~--- 93 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF--- 93 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE---
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee---
Confidence 368999999999999999999997666 79999998632 234567889999999997766 8888887543
Q ss_pred CCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeee-------
Q 042766 777 EGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL------- 849 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl------- 849 (914)
....++||||+ ++++.+++..... ..+++.++..++.|++.||+|||++ +|+||||||+||++
T Consensus 94 --~~~~~lv~e~~-~~~l~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~ 163 (355)
T 2eu9_A 94 --HGHMCIAFELL-GKNTFEFLKENNF----QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFET 163 (355)
T ss_dssp --TTEEEEEEECC-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEE
T ss_pred --CCeEEEEEecc-CCChHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccc
Confidence 34789999999 6778777765432 4689999999999999999999999 99999999999999
Q ss_pred ------------cCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCccccccccc
Q 042766 850 ------------DYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 850 ------------~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~ 913 (914)
+.++.+||+|||+++..... .....||+.|+|||++. +.++|+||+||++|||
T Consensus 164 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el 232 (355)
T 2eu9_A 164 LYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-----------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEY 232 (355)
T ss_dssp EECCC-CCCEEEESCCCEEECCCTTCEETTSC-----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCCcEEEeecCcccccccc-----------ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHH
Confidence 56789999999999864321 12357999999999984 5889999999999987
Q ss_pred C
Q 042766 914 F 914 (914)
Q Consensus 914 f 914 (914)
+
T Consensus 233 ~ 233 (355)
T 2eu9_A 233 Y 233 (355)
T ss_dssp H
T ss_pred H
Confidence 4
No 305
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.95 E-value=1.8e-29 Score=282.57 Aligned_cols=190 Identities=21% Similarity=0.334 Sum_probs=158.4
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC-----------CCCcceEEeEeec
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR-----------HRNLIKIITICSS 773 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~~ 773 (914)
++|++.+.||+|+||.||+|++..+++.||||++.. +....+.+.+|++++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG-DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS-CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC-CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 589999999999999999999999999999999863 2234567889999999886 8999999998764
Q ss_pred CCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeec---
Q 042766 774 TDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD--- 850 (914)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~--- 850 (914)
.. ......++||||+ +++|.+++..... ..+++..+..++.|++.||+|||+++ +|+||||||+||+++
T Consensus 98 ~~-~~~~~~~lv~e~~-~~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 98 KG-PNGVHVVMVFEVL-GENLLALIKKYEH----RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EE-TTEEEEEEEECCC-CEEHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred cC-CCCceEEEEEecC-CCCHHHHHHHhhc----cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 32 2233689999999 8999999986432 45899999999999999999999853 899999999999995
Q ss_pred ---CCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 851 ---YDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 851 ---~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
..+.+||+|||+|+..... .....||+.|+|||++. +.++||||+||++|||+
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 229 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEH-----------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELI 229 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBC-----------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHH
T ss_pred CCcCcceEEEcccccccccCCC-----------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHH
Confidence 3448999999999865421 11347999999999995 57899999999999874
No 306
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.95 E-value=3.2e-29 Score=275.09 Aligned_cols=193 Identities=20% Similarity=0.272 Sum_probs=141.2
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-cchHHHHHHHH-HHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-GASKSFVSECE-ALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|+..+.||+|+||.||+|++..+++.||||+++.... ....++.+|+. +++.++||||+++++++... +.
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~-----~~ 95 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE-----GD 95 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS-----SE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC-----Cc
Confidence 3689999999999999999999999999999999975432 23345666666 67778999999999996543 47
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.++||||+++ +|.+++..... .....+++..+..++.|++.|+.|||+.. +|+||||||+||+++.++.+||+|||
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg 171 (327)
T 3aln_A 96 CWICMELMST-SFDKFYKYVYS-VLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFG 171 (327)
T ss_dssp EEEEECCCSE-EHHHHHHHHHH-TTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCS
T ss_pred eEEEEeecCC-ChHHHHHHHHh-hhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCC
Confidence 8999999975 88887763110 01246899999999999999999999852 79999999999999999999999999
Q ss_pred ccccccccccccccCCCCccccccCcccccccchh--------hhhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKF--------FMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~--------~~~~~Di~s~g~~~~~~f 914 (914)
+++...... ......||+.|+|||++ ++.++||||+||++++|+
T Consensus 172 ~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~ 223 (327)
T 3aln_A 172 ISGQLVDSI---------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELA 223 (327)
T ss_dssp SSCC---------------------------------------CCSHHHHHHHHHHHHHHH
T ss_pred Cceeccccc---------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHH
Confidence 998654321 11124699999999998 247899999999999873
No 307
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.95 E-value=6.1e-29 Score=271.11 Aligned_cols=192 Identities=22% Similarity=0.352 Sum_probs=153.9
Q ss_pred HHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccC--CcchHHHHHHHHHHHhcC--CCCcceEEeEeecCC
Q 042766 700 LSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQ--KGASKSFVSECEALRNIR--HRNLIKIITICSSTD 775 (914)
Q Consensus 700 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~ 775 (914)
+....++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++ ||||+++++++...
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~- 100 (313)
T 3cek_A 23 MSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD- 100 (313)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS-
T ss_pred eeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecC-
Confidence 3344568999999999999999999986 58889999997543 234568899999999997 59999999996543
Q ss_pred CCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcE
Q 042766 776 FEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVA 855 (914)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 855 (914)
...++||| +.+++|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||++++ +.+
T Consensus 101 ----~~~~lv~e-~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~ 165 (313)
T 3cek_A 101 ----QYIYMVME-CGNIDLNSWLKKK------KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GML 165 (313)
T ss_dssp ----SEEEEEEC-CCSEEHHHHHHHC------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEE
T ss_pred ----CEEEEEEe-cCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeE
Confidence 47899999 5588999999865 3688999999999999999999999 9999999999999964 899
Q ss_pred EEecccccccccccccccccCCCCccccccCcccccccchhh---------------hhhcccCcccccccccC
Q 042766 856 HVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 856 ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------------~~~~Di~s~g~~~~~~f 914 (914)
||+|||+++........ .......||+.|+|||++. +.++||||+||++++|+
T Consensus 166 kL~Dfg~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~ 233 (313)
T 3cek_A 166 KLIDFGIANQMQPDTTS------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 233 (313)
T ss_dssp EECCCSSSCC--------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHH
T ss_pred EEeeccccccccCcccc------ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHH
Confidence 99999999866432211 1112356999999999974 35899999999999873
No 308
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.95 E-value=1.4e-29 Score=296.07 Aligned_cols=196 Identities=24% Similarity=0.366 Sum_probs=161.2
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeecc-CCcchHHHHHHHHHHHhcCCCCcceEEeEeecCC-CCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLK-QKGASKSFVSECEALRNIRHRNLIKIITICSSTD-FEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~~ 781 (914)
.++|++.+.||+|+||.||+|++..+++.||||+++.. .....+.+.+|++++++++||||+++++++.... +...+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 36899999999999999999999989999999998643 2334567899999999999999999999865421 223456
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCc---EEEe
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMV---AHVG 858 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~---~ki~ 858 (914)
.++||||+++|+|.+++..... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~---~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSC---TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred EEEEEEeCCCCCHHHHHHhccc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence 7999999999999999986532 13578889999999999999999999 9999999999999997764 9999
Q ss_pred cccccccccccccccccCCCCccccccCcccccccchhh----hhhcccCcccccccccC
Q 042766 859 DFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF----MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 859 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~----~~~~Di~s~g~~~~~~f 914 (914)
|||+++...... ......||+.|+|||++. +.++|+||+||++|+|+
T Consensus 167 DFG~a~~~~~~~---------~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLl 217 (676)
T 3qa8_A 167 DLGYAKELDQGE---------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECI 217 (676)
T ss_dssp SCCCCCBTTSCC---------CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHH
T ss_pred cccccccccccc---------ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHH
Confidence 999998654321 112357999999999984 58999999999999873
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.5e-28 Score=264.13 Aligned_cols=253 Identities=17% Similarity=0.113 Sum_probs=216.5
Q ss_pred cceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCc
Q 042766 321 WLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLI 400 (914)
Q Consensus 321 ~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 400 (914)
++++.+++.++.++.. -.++|++|+|++|++++..+..+..+. +|++|++++|.+++..|..|.++++|+
T Consensus 14 ~~~~c~~~~l~~ip~~---------~~~~l~~L~l~~n~i~~~~~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~ 83 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVG---------IPAASQRIFLHGNRISHVPAASFRACR-NLTILWLHSNVLARIDAAAFTGLALLE 83 (285)
T ss_dssp CEEECCSSCCSSCCTT---------CCTTCSEEECTTSCCCEECTTTTTTCT-TCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred eEEEcCcCCcccCCcC---------CCCCceEEEeeCCcCCccCHHHcccCC-CCCEEECCCCccceeCHhhcCCccCCC
Confidence 6789999999887543 246899999999999976666777766 799999999999999999999999999
Q ss_pred EEEcccCc-ccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCC
Q 042766 401 TFTLEVNQ-FHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYN 479 (914)
Q Consensus 401 ~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 479 (914)
+|++++|+ +....|..|..+++|++|++++|.+++..|..|.++++|++|+|++|++++..+..|.++++|+.|++++|
T Consensus 84 ~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 163 (285)
T 1ozn_A 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN 163 (285)
T ss_dssp EEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCC
Confidence 99999997 88777999999999999999999999888999999999999999999999888788999999888877777
Q ss_pred ccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCC
Q 042766 480 KLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIP 559 (914)
Q Consensus 480 ~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 559 (914)
++++ ..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+
T Consensus 164 ~l~~-------------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 218 (285)
T 1ozn_A 164 RISS-------------------------VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPT 218 (285)
T ss_dssp CCCE-------------------------ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCH
T ss_pred cccc-------------------------cCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCH
Confidence 7652 233457778899999999999999889999999999999999999998887
Q ss_pred cchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCC
Q 042766 560 LSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVK 609 (914)
Q Consensus 560 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 609 (914)
..|..+++|+.|++++|++.+..+.. .-+..++.+..+.|.+.|..|..
T Consensus 219 ~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 219 EALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp HHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGG
T ss_pred HHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchH
Confidence 88999999999999999998654432 22234566678889999988864
No 310
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.1e-29 Score=277.11 Aligned_cols=265 Identities=20% Similarity=0.196 Sum_probs=173.4
Q ss_pred chhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccc
Q 042766 152 IHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAEN 231 (914)
Q Consensus 152 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 231 (914)
+.++++.+.+...++..+..+++|++|+|++|++++..|..|+++++|++|+|++|.+++..| +..+++|++|+|++|
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 334555555543333344455666666666666666555666666667777777776665443 666777777777777
Q ss_pred cccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCcccc
Q 042766 232 QFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVS 311 (914)
Q Consensus 232 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 311 (914)
++++.. ..++|++|++++|++++..+. .+++|++|+|++|++++..|..+..+++|++|+|++|++++..+
T Consensus 91 ~l~~l~-----~~~~L~~L~l~~n~l~~~~~~----~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 91 YVQELL-----VGPSIETLHAANNNISRVSCS----RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp EEEEEE-----ECTTCCEEECCSSCCSEEEEC----CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred cccccc-----CCCCcCEEECCCCccCCcCcc----ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 776432 236777888888877765332 35778888888888887777788888888888888888887777
Q ss_pred cccc-ccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCC
Q 042766 312 IDFS-SLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIP 390 (914)
Q Consensus 312 ~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p 390 (914)
..+. .+++|++|+|++|.++..+. ...+++|++|+|++|+++ .+|..+..+. +|+.|++++|+|++ +|
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~~~--------~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~-~L~~L~L~~N~l~~-l~ 230 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDVKG--------QVVFAKLKTLDLSSNKLA-FMGPEFQSAA-GVTWISLRNNKLVL-IE 230 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEEEC--------CCCCTTCCEEECCSSCCC-EECGGGGGGT-TCSEEECTTSCCCE-EC
T ss_pred HHHhhccCcCCEEECCCCcCccccc--------ccccccCCEEECCCCcCC-cchhhhcccC-cccEEECcCCcccc-hh
Confidence 6663 67888888888888776522 234677778888877777 3444454443 46666666666663 45
Q ss_pred ccccCCCCCcEEEcccCccc-ccCChhhhcccCCceeeecc-cccccccC
Q 042766 391 PGIRNLVNLITFTLEVNQFH-GTIPDVISELKNLQQLSVFN-NFLRGGIP 438 (914)
Q Consensus 391 ~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~-N~l~~~~p 438 (914)
..+..+++|+.|++++|++. +.+|.++..+++|+.|++++ +.++|..|
T Consensus 231 ~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 231 KALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp TTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred hHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 55666666666666666666 55566666666666666663 33444433
No 311
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.95 E-value=2.5e-29 Score=286.43 Aligned_cols=192 Identities=24% Similarity=0.272 Sum_probs=141.5
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceEeE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~l 784 (914)
.|...+.||+|+||+||.+.. .+|+.||||++... ..+.+.+|+++++++ +||||+++++++.. ....++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-----~~~~~l 86 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETT-----DRFLYI 86 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEEC-----SSEEEE
T ss_pred eeeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEec-----CCeEEE
Confidence 455678899999999986544 47889999998643 345678999999886 89999999998543 457899
Q ss_pred EEecccCCCHHHHHhccCCcccc-cCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCC-----------
Q 042766 785 VFEYMENGSLEDWLHQSNDQVEV-RKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYD----------- 852 (914)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~-~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~----------- 852 (914)
||||++ |+|.+++......... ...++..++.++.||+.||+|||++ +|+||||||+|||++.+
T Consensus 87 v~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~ 162 (434)
T 2rio_A 87 ALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGA 162 (434)
T ss_dssp EECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCC
T ss_pred EEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCC
Confidence 999995 6999999865421111 1123335678999999999999999 99999999999999754
Q ss_pred --CcEEEecccccccccccccccccCCCCccccccCcccccccchhh-----------hhhcccCcccccccccC
Q 042766 853 --MVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-----------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 853 --~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-----------~~~~Di~s~g~~~~~~f 914 (914)
+.+||+|||+|+......... .......+||+.|||||++. +.++||||+||++|||+
T Consensus 163 ~~~~~kL~DFG~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ell 233 (434)
T 2rio_A 163 ENLRILISDFGLCKKLDSGQSSF----RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233 (434)
T ss_dssp CSCEEEECCCTTCEECCC------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHH
T ss_pred CceEEEEcccccceecCCCCccc----eeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHH
Confidence 489999999998765432110 01122457999999999883 47899999999999873
No 312
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.95 E-value=4e-29 Score=283.90 Aligned_cols=187 Identities=26% Similarity=0.340 Sum_probs=143.5
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCceE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
..+|...+.||+|+||+||... ..+++.||||++..... ..+.+|+++++++ +||||+++++++.. ....
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~-~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~-----~~~~ 93 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKD-----RQFQ 93 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEE-ESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEE-----TTEE
T ss_pred cEEEecCCeeecCcCEEEEEEE-EeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEec-----CCEE
Confidence 3468899999999999865433 34678999999864332 2356899999999 79999999998643 3478
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC-----CCcEEE
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY-----DMVAHV 857 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~-----~~~~ki 857 (914)
++||||++ |+|.+++.... ....+.+++.++.||+.||+|||++ +|+||||||+||+++. ...+||
T Consensus 94 ~lv~E~~~-g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL 164 (432)
T 3p23_A 94 YIAIELCA-ATLQEYVEQKD-----FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMI 164 (432)
T ss_dssp EEEEECCS-EEHHHHHHSSS-----CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEE
T ss_pred EEEEECCC-CCHHHHHHhcC-----CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEE
Confidence 99999996 69999998654 2344445678999999999999999 9999999999999953 236889
Q ss_pred ecccccccccccccccccCCCCccccccCcccccccchhh-------hhhcccCccccccccc
Q 042766 858 GDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF-------MLYTHIPSFSCTNVHH 913 (914)
Q Consensus 858 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~-------~~~~Di~s~g~~~~~~ 913 (914)
+|||+|+........ .......+||+.|||||++. +.++||||+||+++||
T Consensus 165 ~DFG~a~~~~~~~~~-----~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~el 222 (432)
T 3p23_A 165 SDFGLCKKLAVGRHS-----FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYV 222 (432)
T ss_dssp CCTTEEECC-----------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHH
T ss_pred ecccceeeccCCCcc-----eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHH
Confidence 999999876432211 11223467999999999985 2479999999999987
No 313
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.95 E-value=8.9e-29 Score=270.42 Aligned_cols=188 Identities=19% Similarity=0.268 Sum_probs=141.2
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc-c-hHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG-A-SKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
.++|+..+.||+|+||.||+|++..+++.||||++...... . .+.+.++..+++.++||||+++++++... +.
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~-----~~ 98 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN-----TD 98 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----SE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecC-----Cc
Confidence 46899999999999999999999989999999999754322 2 23344555578888999999999996543 47
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHH-HCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~-~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
.++||||+ ++.+..+..... ..+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+||
T Consensus 99 ~~lv~e~~-~~~~~~l~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~df 169 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKKRMQ-----GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDF 169 (318)
T ss_dssp EEEEECCC-SEEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEecc-CCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEEC
Confidence 89999999 556666654322 468999999999999999999998 5 8999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhh---------hhhcccCcccccccccC
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF---------MLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~---------~~~~Di~s~g~~~~~~f 914 (914)
|+++...... ......||+.|+|||++. +.++||||+||++++|+
T Consensus 170 g~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~ 223 (318)
T 2dyl_A 170 GISGRLVDDK---------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELA 223 (318)
T ss_dssp TTC-----------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHH
T ss_pred CCchhccCCc---------cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHH
Confidence 9997654321 112346999999999983 36899999999999874
No 314
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=4.9e-29 Score=291.77 Aligned_cols=177 Identities=15% Similarity=0.027 Sum_probs=126.7
Q ss_pred cccCCccEEEEEEEECCCcEEEEEEEeeccC----------CcchHHHHHHHHHHHhc-CCCCcceEEeEeecCCCCCCc
Q 042766 712 MIGQGRFGTVYKGILGDDEMVVAVKVINLKQ----------KGASKSFVSECEALRNI-RHRNLIKIITICSSTDFEGVD 780 (914)
Q Consensus 712 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 780 (914)
..+.|+.|.+..++....|+.||||++.... +...+++.+|+++|+++ .|+||++++++ +++..
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~-----~ed~~ 315 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAH-----GENAQ 315 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEE-----EECSS
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEE-----EEECC
Confidence 4567777777777776778899999997432 12235799999999999 69999999999 45556
Q ss_pred eEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEecc
Q 042766 781 FKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDF 860 (914)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DF 860 (914)
..||||||++|++|.+++.+.+ +++.. +|+.||+.||+|+|++ |||||||||+|||++.+|.+||+||
T Consensus 316 ~~yLVMEyv~G~~L~d~i~~~~------~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DF 383 (569)
T 4azs_A 316 SGWLVMEKLPGRLLSDMLAAGE------EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDF 383 (569)
T ss_dssp EEEEEEECCCSEEHHHHHHTTC------CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEecCCCCcHHHHHHhCC------CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeec
Confidence 8999999999999999998653 45543 5889999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCCCCccccccCcccccccchhhh---hhcccCccccccccc
Q 042766 861 GLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFM---LYTHIPSFSCTNVHH 913 (914)
Q Consensus 861 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~---~~~Di~s~g~~~~~~ 913 (914)
|+|+...... ......+||++|||||++.+ .++|+||+|++.+++
T Consensus 384 GlAr~~~~~~--------~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l 431 (569)
T 4azs_A 384 GSIVTTPQDC--------SWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNL 431 (569)
T ss_dssp TTEESCC-----------CCSHHHHHHHHHHHHHHC-----------------CCC
T ss_pred ccCeeCCCCC--------ccccCceechhhccHHHhCCCCCCcccccccccchhhh
Confidence 9998764322 12234689999999999965 689999999998775
No 315
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.8e-27 Score=280.28 Aligned_cols=268 Identities=24% Similarity=0.306 Sum_probs=177.1
Q ss_pred CCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccc
Q 042766 102 FLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVD 181 (914)
Q Consensus 102 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 181 (914)
.+++|++++|+++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+++ .+|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 4788888888888 7777665 67888888888887 5665 4566666666666665 3443 34555555555
Q ss_pred cccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcc
Q 042766 182 INYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIF 261 (914)
Q Consensus 182 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 261 (914)
+|++++ +|. .+++|+.|++++|++++ +|.. +++|++|+|++|++++.
T Consensus 110 ~N~l~~-l~~---------------------------~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l- 156 (622)
T 3g06_A 110 SNPLTH-LPA---------------------------LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL- 156 (622)
T ss_dssp SCCCCC-CCC---------------------------CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-
T ss_pred CCcCCC-CCC---------------------------CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc-
Confidence 555542 222 23445555555555553 3322 25677777777777643
Q ss_pred cccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchh
Q 042766 262 PFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFV 341 (914)
Q Consensus 262 p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 341 (914)
|. .+++|+.|++++|++++ +| ..+++|+.|+|++|+|+++.+ .+++|+.|++++|.++.++.
T Consensus 157 ~~----~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~l~~l~~------ 218 (622)
T 3g06_A 157 PA----LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASLPT----LPSELYKLWAYNNRLTSLPA------ 218 (622)
T ss_dssp CC----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSSCCC------
T ss_pred CC----ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCCCC----ccchhhEEECcCCcccccCC------
Confidence 32 34667777777777774 44 345667777777777765332 12455555555555554321
Q ss_pred hcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhccc
Q 042766 342 IFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELK 421 (914)
Q Consensus 342 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 421 (914)
.+++ |+.|++++|+|++ +| ..+++|++|+|++|+|+. +|. .++
T Consensus 219 ----~~~~-------------------------L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~ 261 (622)
T 3g06_A 219 ----LPSG-------------------------LKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPS 261 (622)
T ss_dssp ----CCTT-------------------------CCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCT
T ss_pred ----CCCC-------------------------CCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccc
Confidence 1233 5555555555554 33 345789999999999995 454 678
Q ss_pred CCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCC
Q 042766 422 NLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQ 469 (914)
Q Consensus 422 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 469 (914)
+|+.|+|++|+|+ .+|..|.++++|+.|+|++|.+++.+|..+..++
T Consensus 262 ~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 262 GLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred cCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 9999999999999 7788999999999999999999998888776655
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.7e-29 Score=275.69 Aligned_cols=258 Identities=18% Similarity=0.164 Sum_probs=165.5
Q ss_pred cccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeecc
Q 042766 174 KLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLT 253 (914)
Q Consensus 174 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 253 (914)
+++.++++.+.+...++..+..+++|++|+|++|.+++..|..|+.+++|++|+|++|++++..| +..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45666777777765555556667778888888888877777777778888888888887776554 7777777777777
Q ss_pred CCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCC
Q 042766 254 ENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTG 333 (914)
Q Consensus 254 ~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 333 (914)
+|++++.. ..++|++|++++|++++..+.. +++|++|+|++|++++..+..|..+++|++|++++|.++..
T Consensus 89 ~n~l~~l~------~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 159 (317)
T 3o53_A 89 NNYVQELL------VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV 159 (317)
T ss_dssp SSEEEEEE------ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEE
T ss_pred CCcccccc------CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcc
Confidence 77776432 2367777777777776554433 45677777777777766666666666666666666666543
Q ss_pred CCCCcchhhcc-cCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCccccc
Q 042766 334 TANDLDFVIFL-SNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGT 412 (914)
Q Consensus 334 ~~~~~~~~~~l-~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 412 (914)
.+..+ ..+++|++|+|++|+++ +.. ....+++|++|+|++|++++.
T Consensus 160 ------~~~~~~~~l~~L~~L~L~~N~l~-------------------------~~~--~~~~l~~L~~L~Ls~N~l~~l 206 (317)
T 3o53_A 160 ------NFAELAASSDTLEHLNLQYNFIY-------------------------DVK--GQVVFAKLKTLDLSSNKLAFM 206 (317)
T ss_dssp ------EGGGGGGGTTTCCEEECTTSCCC-------------------------EEE--CCCCCTTCCEEECCSSCCCEE
T ss_pred ------cHHHHhhccCcCCEEECCCCcCc-------------------------ccc--cccccccCCEEECCCCcCCcc
Confidence 11222 34555555555555554 221 112356677777777777644
Q ss_pred CChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCC-CCCCCccCCCCCccccccC
Q 042766 413 IPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQ-GNIPSSLGNCQNLILFIAS 477 (914)
Q Consensus 413 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l~ 477 (914)
. ..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|.++ +.+|..+..+++|+.++++
T Consensus 207 ~-~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 207 G-PEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp C-GGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred h-hhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 3 33666777777777777776 35556666677777777777766 5555556666666555555
No 317
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.95 E-value=4.4e-28 Score=260.11 Aligned_cols=163 Identities=13% Similarity=0.087 Sum_probs=141.0
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC---cchHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCCce
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNIRHRNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 781 (914)
++|++.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|+.++++++||||+++++++.. .+.
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-----~~~ 105 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT-----RAG 105 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-----CCc
Confidence 579999999999999999999999999999999975432 233688999999999999999999999654 347
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccc
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFG 861 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFG 861 (914)
.|+||||++|++|.++++.. ....++.+++.|++.||+|||++ +|+||||||+||+++.++.+||+++
T Consensus 106 ~~lv~e~~~g~~L~~~l~~~--------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~- 173 (286)
T 3uqc_A 106 GLVVAEWIRGGSLQEVADTS--------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYP- 173 (286)
T ss_dssp EEEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSC-
T ss_pred EEEEEEecCCCCHHHHHhcC--------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEec-
Confidence 89999999999999998532 34557889999999999999999 9999999999999999999998743
Q ss_pred ccccccccccccccCCCCccccccCcccccccchhhhhhcccCcccccccccC
Q 042766 862 LAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 862 la~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~~~~Di~s~g~~~~~~f 914 (914)
+|++| .+.++||||+||++|||+
T Consensus 174 ---------------------------~~~~~---~~~~~Di~slG~il~ell 196 (286)
T 3uqc_A 174 ---------------------------ATMPD---ANPQDDIRGIGASLYALL 196 (286)
T ss_dssp ---------------------------CCCTT---CCHHHHHHHHHHHHHHHH
T ss_pred ---------------------------cccCC---CCchhHHHHHHHHHHHHH
Confidence 34444 578899999999999874
No 318
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=2.9e-27 Score=251.79 Aligned_cols=216 Identities=19% Similarity=0.260 Sum_probs=138.1
Q ss_pred CCCCCccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcC
Q 042766 62 MNFCQWTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTI 141 (914)
Q Consensus 62 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 141 (914)
.++|.|.|+.|+.. ..++.+++++++++. +|..+. +.|++|+|++|++++..+..|+++++|++|+|++|++++..
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 48999999998643 235678888888764 555443 56778888888887655567777888888888888777444
Q ss_pred CCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhh
Q 042766 142 PTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLR 221 (914)
Q Consensus 142 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 221 (914)
+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..|..|+++++|++|+|++|.+++..+..|+.++
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 44456777777777777777755555666677777777777777666566666666666666666666655555566666
Q ss_pred cccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccC
Q 042766 222 RLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNF 282 (914)
Q Consensus 222 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l 282 (914)
+|++|+|++|++++..+..|..+++|++|+|++|++++ +|...+..+++|++|+|++|.+
T Consensus 158 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~~ 217 (270)
T 2o6q_A 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR-VPEGAFDSLEKLKMLQLQENPW 217 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSSCB
T ss_pred ccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCc-CCHHHhccccCCCEEEecCCCe
Confidence 66666666666665544455555555555555555543 2223333444444444444444
No 319
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.95 E-value=2.1e-28 Score=276.92 Aligned_cols=195 Identities=15% Similarity=0.165 Sum_probs=145.6
Q ss_pred hhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC---cchHHHHHHHHHHHhcCC-CCcceE---------EeE
Q 042766 704 TSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK---GASKSFVSECEALRNIRH-RNLIKI---------ITI 770 (914)
Q Consensus 704 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv~l---------~~~ 770 (914)
...|...+.||+|+||+||+|++..+++.||||+++.... ...+.+.+|+.+++.++| ++.... ...
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3468888999999999999999999999999999874332 335789999999999987 321111 111
Q ss_pred eec------------CCCCCCceEeEEEecccCCCHHHHHhccCC-cccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 042766 771 CSS------------TDFEGVDFKALVFEYMENGSLEDWLHQSND-QVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPM 837 (914)
Q Consensus 771 ~~~------------~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~i 837 (914)
+.. .........+++|+++ +++|.+++..... ......+++..++.++.|++.||+|||++ +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 110 0000012356777766 6899998852110 00124577889999999999999999999 99
Q ss_pred EecCCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh--------------hhhccc
Q 042766 838 VHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF--------------MLYTHI 903 (914)
Q Consensus 838 vHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~--------------~~~~Di 903 (914)
|||||||+|||++.++.+||+|||+|+..... ....+| +.|||||++. +.++||
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~Dv 300 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDT 300 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc-----------cccCCC-CceeCchhhhccccccccccCcCCCchhhH
Confidence 99999999999999999999999999865432 123568 9999999993 359999
Q ss_pred CcccccccccC
Q 042766 904 PSFSCTNVHHF 914 (914)
Q Consensus 904 ~s~g~~~~~~f 914 (914)
|||||++|||+
T Consensus 301 wSlGvil~ell 311 (413)
T 3dzo_A 301 WTLGLAIYWIW 311 (413)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999873
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=2.9e-28 Score=281.41 Aligned_cols=240 Identities=16% Similarity=0.160 Sum_probs=188.3
Q ss_pred CCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccccccc
Q 042766 97 VGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQ 176 (914)
Q Consensus 97 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 176 (914)
....++|++|+|++|.+++..|..|+++++|++|+|++|.+++..| ++.+++|++|+|++|.+++.. ..++|+
T Consensus 30 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~ 102 (487)
T 3oja_A 30 RQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIE 102 (487)
T ss_dssp STTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCC
T ss_pred cccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcC
Confidence 3445589999999999998878889999999999999999987666 888999999999999988432 337899
Q ss_pred ccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccc-cccccceeeccCC
Q 042766 177 RLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSIC-NISSVELIFLTEN 255 (914)
Q Consensus 177 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N 255 (914)
+|+|++|.+++..+. .+++|+.|+|++|.+++..|..|+.+++|++|+|++|++++..|..+. .+++|++|+|++|
T Consensus 103 ~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N 179 (487)
T 3oja_A 103 TLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYN 179 (487)
T ss_dssp EEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTS
T ss_pred EEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCC
Confidence 999999998876554 357788889999988888888888888888888888888887787776 6888888888888
Q ss_pred cccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCC
Q 042766 256 RFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTA 335 (914)
Q Consensus 256 ~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 335 (914)
.+++. |.. ..+++|++|+|++|+|++. |..+..+++|+.|+|++|+|++ +|..+..+++|+.|++++|.+...
T Consensus 180 ~l~~~-~~~--~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~-- 252 (487)
T 3oja_A 180 FIYDV-KGQ--VVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG-- 252 (487)
T ss_dssp CCCEE-ECC--CCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHH--
T ss_pred ccccc-ccc--ccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCc--
Confidence 88865 322 2578888888888888864 4447788888888888888886 455677777888888888877621
Q ss_pred CCcchhhcccCCCCCcEEecc
Q 042766 336 NDLDFVIFLSNCSSLKVLSLS 356 (914)
Q Consensus 336 ~~~~~~~~l~~l~~L~~L~Ls 356 (914)
..|.++..++.|+.++++
T Consensus 253 ---~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 253 ---TLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp ---HHHHHHTTCHHHHHHHHH
T ss_pred ---chHHHHHhCCCCcEEecc
Confidence 155566667777776665
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=2.1e-28 Score=282.59 Aligned_cols=215 Identities=20% Similarity=0.174 Sum_probs=137.5
Q ss_pred cEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeC
Q 042766 375 MIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGS 454 (914)
Q Consensus 375 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 454 (914)
|+.|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.|++..+ .++|++|+|++
T Consensus 36 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~~ 108 (487)
T 3oja_A 36 VKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAAN 108 (487)
T ss_dssp CCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECCS
T ss_pred ccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECcC
Confidence 4444444444444444555555555555555555555444 5555566666666665553222 25566666666
Q ss_pred CcCCCCCCCccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCcccccc-ccccceeecccCCccccc
Q 042766 455 NSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVG-NLKNLVMLDISSNQFSGV 533 (914)
Q Consensus 455 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~ 533 (914)
|.|++..+.. +++|+.|++++|.+++..|..+..+..+ +.|+|++|.+++..|..+. .+++|+.|+|++|.|++.
T Consensus 109 N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 109 NNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRV-QYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSE-EEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCC-CEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 6665544432 3455566666666665555555555555 5666666666666666665 677888888888888876
Q ss_pred cCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCcccc
Q 042766 534 IPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEG 604 (914)
Q Consensus 534 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 604 (914)
.+ +..+++|+.|+|++|.+++.+| .|..+++|+.|+|++|+|++ +|..+..+++|+.|++++|++.|
T Consensus 185 ~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 185 KG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp EC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCH
T ss_pred cc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcC
Confidence 33 3357888888888888886554 47788888888888888885 66777788888888888888874
No 322
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=7.4e-31 Score=313.00 Aligned_cols=460 Identities=11% Similarity=0.082 Sum_probs=268.3
Q ss_pred CCCCccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcc---cCCcc------------cCCCCCC
Q 042766 63 NFCQWTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRG---DIPQE------------IGNLFRL 127 (914)
Q Consensus 63 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~---~~p~~------------~~~l~~L 127 (914)
-|++|.++.. .....+++...... .....+..+++|++|+|+++.... ..|.. ...+++|
T Consensus 33 vck~W~~~~~----~~~~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 33 VCKSWYEIER----WCRRKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp SCHHHHHHHH----HHCCEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHHhhh----hhceEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 3557887722 12245566544321 112235677889999999875321 22222 2357789
Q ss_pred CeeecCCCCCCCcCCCCcc-ccCCcchhccCCC-cccCC-CChhccccccccccccccccccCcCCcccc----cccccc
Q 042766 128 EKLALSNNSFSGTIPTNLS-RCSNLIHFCASNN-KLEGQ-IPKEIGNLLKLQRLSVDINYLTGQLPDSVG----NLSAIE 200 (914)
Q Consensus 128 ~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l~~L~ 200 (914)
++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 9999999998877777776 6889999999988 55532 444555788999999999998876555443 566899
Q ss_pred eeecccCCCCCCCCccc----hhhhcccccccccc-cccCCCCCccccccccceeeccCC-------cccCccccccccc
Q 042766 201 VIRITENSLGGKIPTTL----GLLRRLVNLNVAEN-QFSGMFPRSICNISSVELIFLTEN-------RFSGIFPFDILLN 268 (914)
Q Consensus 201 ~L~L~~N~l~~~~p~~~----~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N-------~l~~~~p~~~~~~ 268 (914)
.|++++|. ....+..+ ..+++|++|+|++| .+.+ +|..+..+++|+.|+++.+ .+.+. +. .+.+
T Consensus 188 ~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l-~~-~l~~ 263 (594)
T 2p1m_B 188 SLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGL-SV-ALSG 263 (594)
T ss_dssp EEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHH-HH-HHHT
T ss_pred EEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHH-HH-HHhc
Confidence 99999887 21112223 34588888888888 4444 6777778888888885443 34332 22 2346
Q ss_pred Cccccee-eccCccCCCCCCCccccccccccccccCccCCccccc-cccccccccceeccCCcCCCCCCCCcchhhcccC
Q 042766 269 LPNLKKL-GIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSI-DFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSN 346 (914)
Q Consensus 269 l~~L~~L-~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~ 346 (914)
+++|+.| .+.+... +.+|..+..+++|++|+|++|.+++.... .+..+++|++|++++| ++.. .++.....
T Consensus 264 ~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~-----~l~~l~~~ 336 (594)
T 2p1m_B 264 CKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDA-----GLEVLAST 336 (594)
T ss_dssp CTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHH-----HHHHHHHH
T ss_pred CCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHH-----HHHHHHHh
Confidence 7777777 3443322 23444445667777777777776543222 2345666777777665 3211 12222334
Q ss_pred CCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccc-cCCCCCcEEEcccCcccccCChhhh-cccCCc
Q 042766 347 CSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGI-RNLVNLITFTLEVNQFHGTIPDVIS-ELKNLQ 424 (914)
Q Consensus 347 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~ 424 (914)
+++|+.|+++++.-.| ..+.+.+++.....+ .++++|+.|+++.|++++.....+. .+++|+
T Consensus 337 ~~~L~~L~L~~~~~~g----------------~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~ 400 (594)
T 2p1m_B 337 CKDLRELRVFPSEPFV----------------MEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMT 400 (594)
T ss_dssp CTTCCEEEEECSCTTC----------------SSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEEEecCcccc----------------cccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcc
Confidence 6666666663321000 001122222111112 2356666666666666655444443 466777
Q ss_pred eeeec--c----cccccc-----cCccccCCCCCCeEEeeCCcCCCCCCCccCC-CCCccccccCCCccCCCCchhhhcc
Q 042766 425 QLSVF--N----NFLRGG-----IPSGLGNLTKLGSLDLGSNSLQGNIPSSLGN-CQNLILFIASYNKLTGDLPQQLLSI 492 (914)
Q Consensus 425 ~L~L~--~----N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~p~~~~~~ 492 (914)
.|+|+ + |.+++. ++..+..+++|+.|+|++ .+++..+..+.. +++|+.|++++|.+++..+..
T Consensus 401 ~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~---- 475 (594)
T 2p1m_B 401 RFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHH---- 475 (594)
T ss_dssp EEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHH----
T ss_pred eeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHH----
Confidence 77776 3 444421 112245567777777765 555444444443 666666666666654211110
Q ss_pred cchhhhhcccCCccCCCccccccccccceeecccCCccccccCc-cccccccccEEEeecccccccCCcch-hccCCCCE
Q 042766 493 TTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPV-TLSTCVSLEYLDISINSFYGVIPLSF-RFLKSIKA 570 (914)
Q Consensus 493 ~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~ 570 (914)
...++++|+.|+|++|++++..+. ....+++|++|++++|+++......+ ..++.|+.
T Consensus 476 --------------------l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i 535 (594)
T 2p1m_B 476 --------------------VLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNV 535 (594)
T ss_dssp --------------------HHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEE
T ss_pred --------------------HHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEE
Confidence 113466788888888887654443 33457888888888888754433444 45677777
Q ss_pred EEccCCccc
Q 042766 571 LNVSSNNLS 579 (914)
Q Consensus 571 L~Ls~N~l~ 579 (914)
..+..+.-.
T Consensus 536 ~~~~~~~~~ 544 (594)
T 2p1m_B 536 EVIDERGAP 544 (594)
T ss_dssp EEECSSSCG
T ss_pred EEecCCCcc
Confidence 666665443
No 323
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=2.6e-30 Score=308.26 Aligned_cols=451 Identities=16% Similarity=0.135 Sum_probs=249.5
Q ss_pred CEEEcCCCCCcccCC-cccCCCCCCCeeecCCCCCCC---cCCCCccccCCcchhccCCCcccCCCChhccccccccccc
Q 042766 104 RYINLADNGFRGDIP-QEIGNLFRLEKLALSNNSFSG---TIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLS 179 (914)
Q Consensus 104 ~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~---~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 179 (914)
+.+++++... ..| ..+..+++|++|+|+++.... ..|..++. .....++.....+++|++|+
T Consensus 46 ~~l~~~~~~~--~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~------------~~~~~l~~l~~~~~~L~~L~ 111 (594)
T 2p1m_B 46 RKVFIGNCYA--VSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGG------------YVYPWIEAMSSSYTWLEEIR 111 (594)
T ss_dssp CEEEESSTTS--SCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCC------------BCHHHHHHHHHHCTTCCEEE
T ss_pred eEEeeccccc--cCHHHHHhhCCCceEEeccCCCchhhcccccccccc------------hhhHHHHHHHHhCCCCCeEE
Confidence 4566655432 223 345677889999998875321 12222100 00000111122344555555
Q ss_pred cccccccCcCCcccc-cccccceeecccC-CCCCC-CCccchhhhcccccccccccccCCCCCccc----cccccceeec
Q 042766 180 VDINYLTGQLPDSVG-NLSAIEVIRITEN-SLGGK-IPTTLGLLRRLVNLNVAENQFSGMFPRSIC----NISSVELIFL 252 (914)
Q Consensus 180 L~~N~l~~~~p~~~~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l~~L~~L~L 252 (914)
|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|+.|++
T Consensus 112 L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l 191 (594)
T 2p1m_B 112 LKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNI 191 (594)
T ss_dssp EESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEEC
T ss_pred eeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEe
Confidence 555554444443333 3455555555555 33211 223333555555555555555543333222 4446666666
Q ss_pred cCCc--ccCcccccccccCcccceeeccCc-cCCCCCCCccccccccccccccC-------ccCCccccccccccccccc
Q 042766 253 TENR--FSGIFPFDILLNLPNLKKLGIGGN-NFVGSIPDSLSNASNLELLDLPS-------NQFKGKVSIDFSSLKNLWL 322 (914)
Q Consensus 253 ~~N~--l~~~~p~~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-------N~l~~~~~~~~~~l~~L~~ 322 (914)
++|. ++......+..++++|++|+|++| .+.+ +|..+..+++|+.|+++. |.+.+.. ..+.++++|+.
T Consensus 192 ~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~-~~l~~~~~L~~ 269 (594)
T 2p1m_B 192 SCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLS-VALSGCKELRC 269 (594)
T ss_dssp TTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHH-HHHHTCTTCCE
T ss_pred cccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHH-HHHhcCCCccc
Confidence 6664 211111122234567777777766 3332 555566666777776433 3344332 35666777777
Q ss_pred e-eccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeeccccccc-CCccccCCCCCc
Q 042766 323 L-NLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGT-IPPGIRNLVNLI 400 (914)
Q Consensus 323 L-~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~-~p~~~~~l~~L~ 400 (914)
| .+.+.... .++..+..+++|+.|+|++|.+++.....+....++|+.|++++| +... ++.....+++|+
T Consensus 270 Ls~~~~~~~~-------~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~ 341 (594)
T 2p1m_B 270 LSGFWDAVPA-------YLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLR 341 (594)
T ss_dssp EECCBTCCGG-------GGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCC
T ss_pred ccCCcccchh-------hHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCC
Confidence 6 33322111 133344567778888888877654333332222346777777766 3322 222233567788
Q ss_pred EEEc---------ccCcccccCChhhh-cccCCceeeecccccccccCcccc-CCCCCCeEEee--C----CcCCCCC--
Q 042766 401 TFTL---------EVNQFHGTIPDVIS-ELKNLQQLSVFNNFLRGGIPSGLG-NLTKLGSLDLG--S----NSLQGNI-- 461 (914)
Q Consensus 401 ~L~L---------~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~~-- 461 (914)
+|++ +.|.+++.....+. .+++|+.|+++.|.+++..+..+. .+++|+.|+|+ + |.+++..
T Consensus 342 ~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~ 421 (594)
T 2p1m_B 342 ELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLD 421 (594)
T ss_dssp EEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTH
T ss_pred EEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchh
Confidence 8877 33455543333333 477888888877877765555554 47788888888 3 4444211
Q ss_pred ---CCccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCccccccc-cccceeecccCCccccccCcc
Q 042766 462 ---PSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGN-LKNLVMLDISSNQFSGVIPVT 537 (914)
Q Consensus 462 ---p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~ 537 (914)
+..+.++++|+.|++ ++ .+++..+..++. +++|+.|+|++|.+++..+..
T Consensus 422 ~~~~~l~~~~~~L~~L~L-------------------------~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~ 475 (594)
T 2p1m_B 422 IGFGAIVEHCKDLRRLSL-------------------------SG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHH 475 (594)
T ss_dssp HHHHHHHHHCTTCCEEEC-------------------------CS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHH
T ss_pred hHHHHHHhhCCCccEEee-------------------------cC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHH
Confidence 111334445555544 33 333333334443 788999999999998766666
Q ss_pred c-cccccccEEEeecccccccCCc-chhccCCCCEEEccCCccccccCccc-cccCCCCeEeCCCCcccc
Q 042766 538 L-STCVSLEYLDISINSFYGVIPL-SFRFLKSIKALNVSSNNLSGKIPEFL-ENLSFLEFLNLSYNYFEG 604 (914)
Q Consensus 538 ~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ls~N~l~~ 604 (914)
+ .++++|++|+|++|.+++.... ....+++|+.|++++|+++......+ ..++.|+...+..+.-..
T Consensus 476 l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~~ 545 (594)
T 2p1m_B 476 VLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAPD 545 (594)
T ss_dssp HHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSCGG
T ss_pred HHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCccc
Confidence 5 6799999999999999765544 34468999999999999965544555 567788777777665443
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=1.8e-26 Score=246.52 Aligned_cols=228 Identities=19% Similarity=0.220 Sum_probs=181.8
Q ss_pred EeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccc
Q 042766 353 LSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNF 432 (914)
Q Consensus 353 L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 432 (914)
.+.++..+. .+|..+. .++++|++++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.
T Consensus 12 ~~c~~~~l~-~ip~~l~---~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP---FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EECTTSCCS-SCCSSSC---TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEecCCCcc-ccCCCCC---CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 344444454 4555432 357777777777777777788888888888888888887777788888888888888888
Q ss_pred cccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCccc
Q 042766 433 LRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPL 512 (914)
Q Consensus 433 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~ 512 (914)
+++..+..|.++++|++|++++|++++..+..++++++|+.|++++|++++. .+|.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------------------------~l~~ 143 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF------------------------KLPE 143 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC------------------------CCCG
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCcccee------------------------cCch
Confidence 8877777888888888888888888876666777777777777776666521 2466
Q ss_pred cccccccceeecccCCccccccCcccccccccc----EEEeecccccccCCcchhccCCCCEEEccCCccccccCccccc
Q 042766 513 QVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLE----YLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLEN 588 (914)
Q Consensus 513 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 588 (914)
.|+++++|++|+|++|++++..+..+..+.+|+ .|++++|.+++..+..+.. .+|+.|+|++|++++..+..+..
T Consensus 144 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~ 222 (276)
T 2z62_A 144 YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDR 222 (276)
T ss_dssp GGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTT
T ss_pred hhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcc
Confidence 788888999999999999988888888888887 8999999999777766654 48999999999999887788899
Q ss_pred cCCCCeEeCCCCccccccCCC
Q 042766 589 LSFLEFLNLSYNYFEGEVPVK 609 (914)
Q Consensus 589 l~~L~~L~ls~N~l~~~~p~~ 609 (914)
+++|+.|++++|+++|.+|..
T Consensus 223 l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 223 LTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CCSCCEEECCSSCBCCCTTTT
T ss_pred cccccEEEccCCcccccCCch
Confidence 999999999999999999854
No 325
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.94 E-value=4.8e-27 Score=254.24 Aligned_cols=171 Identities=20% Similarity=0.332 Sum_probs=144.3
Q ss_pred hccccc-CcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHH-HhcCCCCcceEEeEeecCCCCCCceE
Q 042766 705 SEFSSS-NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEAL-RNIRHRNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~~~~~ 782 (914)
++|.+. +.||+|+||.||+|++..+++.||+|+++. ...+.+|++++ +..+||||+++++++... .......
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENL-YAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhh-cCCCceE
Confidence 567776 789999999999999999999999999852 35677899988 566899999999986542 1234578
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecC---CCcEEEec
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDY---DMVAHVGD 859 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~---~~~~ki~D 859 (914)
++||||+++|+|.+++..... ..+++.++..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred EEEEeecCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEec
Confidence 999999999999999986532 4689999999999999999999999 9999999999999998 78999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhhhhhcccCcccccccccC
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFFMLYTHIPSFSCTNVHHF 914 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~~~~~Di~s~g~~~~~~f 914 (914)
||+|+.... .-++.++|+||+||++|||+
T Consensus 164 fg~a~~~~~--------------------------~~~~~~~DiwslG~il~el~ 192 (299)
T 3m2w_A 164 FGFAKETTG--------------------------EKYDKSCDMWSLGVIMYILL 192 (299)
T ss_dssp CTTCEECTT--------------------------CGGGGHHHHHHHHHHHHHHH
T ss_pred ccccccccc--------------------------ccCCchhhHHHHHHHHHHHH
Confidence 999975321 11356799999999999873
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=5.2e-26 Score=243.00 Aligned_cols=211 Identities=16% Similarity=0.170 Sum_probs=141.1
Q ss_pred cCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccc
Q 042766 93 LSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNL 172 (914)
Q Consensus 93 ~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 172 (914)
+|..+. +.|++|+|++|++++..+..++++++|++|+|++|++++..+..+.++++|++|+|++|++++..|..|.++
T Consensus 22 ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (276)
T 2z62_A 22 IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGL 99 (276)
T ss_dssp CCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC
T ss_pred cCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCC
Confidence 454443 468888888888887777788888888888888888886666678888888888888888887777778888
Q ss_pred ccccccccccccccCcCCcccccccccceeecccCCCCCC-CCccchhhhcccccccccccccCCCCCccccccccc---
Q 042766 173 LKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGK-IPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVE--- 248 (914)
Q Consensus 173 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~--- 248 (914)
++|++|++++|.+++..+..++++++|++|++++|.+++. +|..|+.+++|++|+|++|++++..+..|..+.+|+
T Consensus 100 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ 179 (276)
T 2z62_A 100 SSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLN 179 (276)
T ss_dssp TTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCC
T ss_pred ccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccc
Confidence 8888888888888766666677777888888888877753 477777777777777777777766666666555555
Q ss_pred -eeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCC
Q 042766 249 -LIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFK 307 (914)
Q Consensus 249 -~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 307 (914)
.|++++|.+++. |...+ ...+|++|+|++|++++..+..|..+++|+.|+|++|+++
T Consensus 180 l~L~ls~n~l~~~-~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 180 LSLDLSLNPMNFI-QPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp EEEECCSSCCCEE-CTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred eeeecCCCccccc-Ccccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 455555555432 22222 2224444444444444333333444444444444444443
No 327
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=5.5e-25 Score=234.13 Aligned_cols=206 Identities=20% Similarity=0.214 Sum_probs=154.3
Q ss_pred cEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeC
Q 042766 375 MIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGS 454 (914)
Q Consensus 375 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 454 (914)
.+.+++++|+++. +|..+. ++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 18 ~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 4566666666663 444332 4566666666666655555666666666666666666654444556666666666666
Q ss_pred CcCCCCCCCccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCcccccc
Q 042766 455 NSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVI 534 (914)
Q Consensus 455 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 534 (914)
|++++..+..|.++++|+.|++ ++|++++..|..|+.+++|++|+|++|++++..
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l-------------------------~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRL-------------------------DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEEC-------------------------CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CcCCcCCHhHcccccCCCEEEC-------------------------CCCccCeeCHHHhCcCcCCCEEECCCCcCCccC
Confidence 6666555555555555555554 445555555667788999999999999999888
Q ss_pred CccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCC
Q 042766 535 PVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPV 608 (914)
Q Consensus 535 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 608 (914)
+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|+|.|.++.
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCcc
Confidence 88899999999999999999988888899999999999999999988888899999999999999999998873
No 328
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.92 E-value=3e-25 Score=233.42 Aligned_cols=192 Identities=18% Similarity=0.208 Sum_probs=157.2
Q ss_pred CCCCccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCC
Q 042766 63 NFCQWTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIP 142 (914)
Q Consensus 63 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 142 (914)
+||.|.|++|.. ..+.+++++++++ .+|..+. +.|++|+|++|++++..|..|+++++|++|+|++|++++..|
T Consensus 3 ~Cp~~~gC~C~~---~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNE---GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEG---GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCC---CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 689999999953 2356889998886 4666554 688999999999998888888999999999999999988777
Q ss_pred CCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhc
Q 042766 143 TNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRR 222 (914)
Q Consensus 143 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 222 (914)
..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|+.+++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 156 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcC
Confidence 78888899999999999988777777888888888888888888666667788888888888888888777777888888
Q ss_pred ccccccccccccCCCCCccccccccceeeccCCcccCc
Q 042766 223 LVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGI 260 (914)
Q Consensus 223 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 260 (914)
|++|+|++|++++..+..|..+++|++|+|++|.+++.
T Consensus 157 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 157 LQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 88888888888877777777788888888888877654
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=7e-25 Score=235.39 Aligned_cols=207 Identities=22% Similarity=0.195 Sum_probs=141.7
Q ss_pred cCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccc
Q 042766 394 RNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLIL 473 (914)
Q Consensus 394 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 473 (914)
+++++++++++++|+++.+ |..+. ++++.|+|++|.+++..|..|.++++|++|+|++|.|++..+. +.+++|+.
T Consensus 7 ~~l~~l~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~ 81 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLTAL-PPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGT 81 (290)
T ss_dssp ECSTTCCEEECTTSCCSSC-CSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCE
T ss_pred cccCCccEEECCCCCCCcC-CCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCE
Confidence 3444455555555555422 22221 3455555555555544444455555555555555555432221 44455555
Q ss_pred cccCCCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeeccc
Q 042766 474 FIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINS 553 (914)
Q Consensus 474 L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 553 (914)
|++++|+++ .+|..+..+..+ ++|++++|+|++..|..|.++++|++|+|++|++++.++..|..+++|+.|+|++|+
T Consensus 82 L~Ls~N~l~-~l~~~~~~l~~L-~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 82 LDLSHNQLQ-SLPLLGQTLPAL-TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EECCSSCCS-SCCCCTTTCTTC-CEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EECCCCcCC-cCchhhccCCCC-CEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 555555554 444444444444 566666666666666788899999999999999998888889999999999999999
Q ss_pred ccccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCC
Q 042766 554 FYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPV 608 (914)
Q Consensus 554 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 608 (914)
|++..+..|..+++|+.|+|++|+|+ .+|..+..+..|+.++|++|+|.|.+..
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~~ 213 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCEI 213 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGGG
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCcc
Confidence 99888888899999999999999998 6788888888999999999999987753
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=5.7e-25 Score=236.09 Aligned_cols=203 Identities=22% Similarity=0.251 Sum_probs=115.8
Q ss_pred CCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccccccc
Q 042766 97 VGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQ 176 (914)
Q Consensus 97 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 176 (914)
+.++++++++++++|+++ .+|..+. +++++|+|++|++++..|..+..+++|++|+|++|++++. |.. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCC
Confidence 445566666666666666 4555443 4666666666666655556666666666666666666532 222 4556666
Q ss_pred ccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCc
Q 042766 177 RLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENR 256 (914)
Q Consensus 177 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 256 (914)
+|+|++|+++ .+|..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 6666666665 455555566666666666666665555556666666666666666655555555555555555555555
Q ss_pred ccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCC
Q 042766 257 FSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFK 307 (914)
Q Consensus 257 l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 307 (914)
+++ +|...+.++++|++|+|++|+|+ .+|..+..+++|+.|+|++|.+.
T Consensus 160 l~~-l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 160 LTE-LPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CSC-CCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCc-cCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 553 33344445555555555555555 34444444455555555555443
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=7.8e-25 Score=233.15 Aligned_cols=212 Identities=17% Similarity=0.208 Sum_probs=141.2
Q ss_pred CCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccccccc
Q 042766 97 VGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQ 176 (914)
Q Consensus 97 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 176 (914)
+..+++|++|++++|.++ .++ .++.+++|++|+|++|.+++ + +.++.+++|++|+|++|++++..|..|+.+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 345566666666666665 233 46666677777777776664 2 3566667777777777777655555666677777
Q ss_pred ccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCc
Q 042766 177 RLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENR 256 (914)
Q Consensus 177 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 256 (914)
+|+|++|++++..|..|+++++|++|++++|.+++..|..|+.+++|++|++++|++++..+..|..+++|++|++++|+
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 77777777776656666677777777777777776666666677777777777777776666666777777777777777
Q ss_pred ccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccc
Q 042766 257 FSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNL 320 (914)
Q Consensus 257 l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 320 (914)
+++..| ..+..+++|++|+|++|.+.+. +++|+.|+++.|+++|.+|..++.+...
T Consensus 193 l~~~~~-~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~~ 248 (272)
T 3rfs_A 193 LKSVPD-GVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAPD 248 (272)
T ss_dssp CSCCCT-TTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCGG
T ss_pred CCccCH-HHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCCC
Confidence 775433 4455677777777777766643 3457777777777777777776665543
No 332
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=6.8e-25 Score=233.61 Aligned_cols=207 Identities=18% Similarity=0.248 Sum_probs=153.2
Q ss_pred ceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccC
Q 042766 78 RLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCAS 157 (914)
Q Consensus 78 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 157 (914)
.++.|+++++.+.. .+.+..+++|++|+|++|.+++ + +.++++++|++|+|++|++++..|..++.+++|++|+|+
T Consensus 42 ~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 117 (272)
T 3rfs_A 42 SIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLV 117 (272)
T ss_dssp TCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred ceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECC
Confidence 56777777777643 2347777778888888887775 2 367777788888888887776666667777888888888
Q ss_pred CCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCC
Q 042766 158 NNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMF 237 (914)
Q Consensus 158 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 237 (914)
+|++++..|..|+.+++|++|+|++|++++..|..++.+++|++|++++|++++..|..|+.+++|++|+|++|++++..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (272)
T 3rfs_A 118 ENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVP 197 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccC
Confidence 88877666666777778888888888777666666777778888888888877776777777778888888888887777
Q ss_pred CCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCcccccccc
Q 042766 238 PRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNL 296 (914)
Q Consensus 238 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 296 (914)
|..|..+++|++|++++|.+.+ .+++|+.|+++.|+++|.+|.+++.+...
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~~--------~~~~l~~l~~~~n~~~g~ip~~~~~~~~~ 248 (272)
T 3rfs_A 198 DGVFDRLTSLQYIWLHDNPWDC--------TCPGIRYLSEWINKHSGVVRNSAGSVAPD 248 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCBCC--------CTTTTHHHHHHHHHTGGGBBCTTSCBCGG
T ss_pred HHHHhCCcCCCEEEccCCCccc--------cCcHHHHHHHHHHhCCCcccCcccccCCC
Confidence 7777777788888888877764 34567777777788877777777765543
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=1.4e-26 Score=257.52 Aligned_cols=274 Identities=18% Similarity=0.184 Sum_probs=146.5
Q ss_pred EEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCC----CCccccC-CcchhccCCCcccCCCChhcccc-----cc
Q 042766 105 YINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIP----TNLSRCS-NLIHFCASNNKLEGQIPKEIGNL-----LK 174 (914)
Q Consensus 105 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 174 (914)
+++|+.|+++|.+|..+...++|++|||++|.+++..+ ..+..++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 45677777777777766666667777777777775444 4555666 67777777777766556655554 66
Q ss_pred ccccccccccccCcCCcccccc-----cccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCcccc-ccccc
Q 042766 175 LQRLSVDINYLTGQLPDSVGNL-----SAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICN-ISSVE 248 (914)
Q Consensus 175 L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~ 248 (914)
|++|+|++|++++..+..+... ++|++|+|++|.+++..+..+... +.. .++|+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~--------------------l~~~~~~L~ 141 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQA--------------------FSNLPASIT 141 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH--------------------HTTSCTTCC
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHH--------------------HHhCCCcee
Confidence 6666666666665544433332 455555555555554444333221 111 12444
Q ss_pred eeeccCCcccCccccc---ccccCc-ccceeeccCccCCCCCCCcccc----c-cccccccccCccCCccc----ccccc
Q 042766 249 LIFLTENRFSGIFPFD---ILLNLP-NLKKLGIGGNNFVGSIPDSLSN----A-SNLELLDLPSNQFKGKV----SIDFS 315 (914)
Q Consensus 249 ~L~L~~N~l~~~~p~~---~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~----l-~~L~~L~Ls~N~l~~~~----~~~~~ 315 (914)
+|+|++|.+++..+.. .+..++ +|++|+|++|++++..+..+.. . ++|++|||++|+|++.. +..+.
T Consensus 142 ~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 142 SLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp EEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 4444444444221111 111222 5555666666555444433332 2 46666666666665422 22333
Q ss_pred c-cccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCcccc
Q 042766 316 S-LKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIR 394 (914)
Q Consensus 316 ~-l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~ 394 (914)
. .++|++|+|++|.++..+... +...+..+++|+.|+|++|.+.+..+..+. .++..+.
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~--l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~------------------~l~~~~~ 281 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLEN--LKLLKDSLKHLQTVYLDYDIVKNMSKEQCK------------------ALGAAFP 281 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHH--HHHTTTTTTTCSEEEEEHHHHTTCCHHHHH------------------HHHTTST
T ss_pred cCCCCceEEECcCCCCCcHHHHH--HHHHHhcCCCccEEEeccCCccccCHHHHH------------------HHHHHhc
Confidence 3 235666666666655542211 123345556666666666665533222222 1234556
Q ss_pred CCCCCcEEEcccCcccccCChhhh
Q 042766 395 NLVNLITFTLEVNQFHGTIPDVIS 418 (914)
Q Consensus 395 ~l~~L~~L~L~~N~l~~~~p~~~~ 418 (914)
.+++|+.||+++|++....+..+.
T Consensus 282 ~l~~L~~LdL~~N~l~~~~~~~~~ 305 (362)
T 3goz_A 282 NIQKIILVDKNGKEIHPSHSIPIS 305 (362)
T ss_dssp TCCEEEEECTTSCBCCGGGCHHHH
T ss_pred cCCceEEEecCCCcCCCcchHHHH
Confidence 677777788888877766554443
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=5.7e-27 Score=260.75 Aligned_cols=270 Identities=16% Similarity=0.151 Sum_probs=183.8
Q ss_pred EEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCC----cccCCCC-CCCeeecCCCCCCCcCCCCcccc-----CC
Q 042766 81 ELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIP----QEIGNLF-RLEKLALSNNSFSGTIPTNLSRC-----SN 150 (914)
Q Consensus 81 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l-----~~ 150 (914)
.++|+.++++|.+|..+...++|++|+|++|.+++..+ ..+.+++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 36788999999998888888889999999999997766 6788898 89999999999998878888876 99
Q ss_pred cchhccCCCcccCCCChhcccc-----ccccccccccccccCcCCccccc-----ccccceeecccCCCCCCCCccc---
Q 042766 151 LIHFCASNNKLEGQIPKEIGNL-----LKLQRLSVDINYLTGQLPDSVGN-----LSAIEVIRITENSLGGKIPTTL--- 217 (914)
Q Consensus 151 L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~p~~~--- 217 (914)
|++|+|++|++++..+..++.. ++|++|+|++|++++..+..+.. .++|++|+|++|.++...+..+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999998877766554 89999999999999776655543 2689999999999986444433
Q ss_pred -hhhh-cccccccccccccCCCCCccccc-----cccceeeccCCcccCc----ccccccccCcccceeeccCccCCCCC
Q 042766 218 -GLLR-RLVNLNVAENQFSGMFPRSICNI-----SSVELIFLTENRFSGI----FPFDILLNLPNLKKLGIGGNNFVGSI 286 (914)
Q Consensus 218 -~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~----~p~~~~~~l~~L~~L~Ls~N~l~~~~ 286 (914)
..++ +|++|+|++|++++..+..+... ++|++|+|++|.+++. ++..+....++|++|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 3443 78888888888876655444332 4666666666666542 12222211235555555555554332
Q ss_pred CCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCc-chhhcccCCCCCcEEeccccccCCCcC
Q 042766 287 PDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDL-DFVIFLSNCSSLKVLSLSDNQFGGELP 365 (914)
Q Consensus 287 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~~l~~l~~L~~L~Ls~N~l~~~~p 365 (914)
+..+ ...+..+++|++|+|++|.+...+.... .++..+..+++|+.||+++|++....+
T Consensus 242 ~~~l--------------------~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 242 LENL--------------------KLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HHHH--------------------HHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHHH--------------------HHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 2110 0223344455555555555433322110 122345567778888888888776555
Q ss_pred chhhc
Q 042766 366 HSIAN 370 (914)
Q Consensus 366 ~~~~~ 370 (914)
..+..
T Consensus 302 ~~~~~ 306 (362)
T 3goz_A 302 IPISN 306 (362)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 335
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=3.7e-25 Score=257.52 Aligned_cols=174 Identities=16% Similarity=0.140 Sum_probs=125.7
Q ss_pred cccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCc--------chHHHHHHHHHHHhcCCCCcceEEeEeecCCCCCC
Q 042766 708 SSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKG--------ASKSFVSECEALRNIRHRNLIKIITICSSTDFEGV 779 (914)
Q Consensus 708 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 779 (914)
...+.||+|+||.||+|+. .++.+|+|+...+... ..+++.+|++++++++||||+++..++...
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~----- 411 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDL----- 411 (540)
T ss_dssp ---------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEET-----
T ss_pred CCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeC-----
Confidence 4467899999999999955 4667888886533211 134589999999999999999554444322
Q ss_pred ceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEec
Q 042766 780 DFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGD 859 (914)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 859 (914)
+..++||||++|++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|
T Consensus 412 ~~~~lVmE~~~ggsL~~~l~~--------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~D 472 (540)
T 3en9_A 412 DNKRIMMSYINGKLAKDVIED--------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIID 472 (540)
T ss_dssp TTTEEEEECCCSEEHHHHSTT--------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECC
T ss_pred CccEEEEECCCCCCHHHHHHH--------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEE
Confidence 245899999999999999864 457899999999999999 9999999999999998 999999
Q ss_pred ccccccccccccccccCCCCccccccCcccccccchhh------hhhcccCcccc
Q 042766 860 FGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF------MLYTHIPSFSC 908 (914)
Q Consensus 860 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~------~~~~Di~s~g~ 908 (914)
||+|+......... ..........+||+.|||||++. +..+|+|+...
T Consensus 473 FGla~~~~~~~~~~-~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl 526 (540)
T 3en9_A 473 FGLGKISNLDEDKA-VDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIIL 526 (540)
T ss_dssp CTTCEECCCHHHHH-HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHH
T ss_pred CccCEECCCccccc-cchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999765422100 00000112468999999999994 46778887543
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=7.7e-25 Score=228.54 Aligned_cols=181 Identities=16% Similarity=0.177 Sum_probs=101.7
Q ss_pred CCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCC-CCCcCCCCccccCCcchhccCC-CcccCCCChhccccccccccc
Q 042766 102 FLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNS-FSGTIPTNLSRCSNLIHFCASN-NKLEGQIPKEIGNLLKLQRLS 179 (914)
Q Consensus 102 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ 179 (914)
.|++|+|++|++++..+..|+++++|++|+|++|+ +++..+..|..+++|++|++++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 67777777777776656677777777777777775 6644444666666666666666 666644445566666666666
Q ss_pred cccccccCcCCcccccccccc---eeecccC-CCCCCCCccchhhhcccccccccccccCCCCCccccccccc-eeeccC
Q 042766 180 VDINYLTGQLPDSVGNLSAIE---VIRITEN-SLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVE-LIFLTE 254 (914)
Q Consensus 180 L~~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~L~~ 254 (914)
+++|++++ +|. |+.+++|+ +|++++| .++ +..+..|.++++|+ +|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~------------------------~i~~~~~~~l~~L~~~L~l~~ 165 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMT------------------------SIPVNAFQGLCNETLTLKLYN 165 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCC------------------------EECTTTTTTTBSSEEEEECCS
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchh------------------------hcCcccccchhcceeEEEcCC
Confidence 66666653 444 44444444 4444444 444 33333444444444 444444
Q ss_pred CcccCcccccccccCcccceeeccCcc-CCCCCCCccccc-cccccccccCccCCccc
Q 042766 255 NRFSGIFPFDILLNLPNLKKLGIGGNN-FVGSIPDSLSNA-SNLELLDLPSNQFKGKV 310 (914)
Q Consensus 255 N~l~~~~p~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~ 310 (914)
|+++ .+|...+.. ++|++|+|++|+ +++..+..|..+ ++|+.|+|++|+|++.+
T Consensus 166 n~l~-~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~ 221 (239)
T 2xwt_C 166 NGFT-SVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALP 221 (239)
T ss_dssp CCCC-EECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCC
T ss_pred CCCc-ccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCC
Confidence 4444 233333322 455555555552 544444445555 55555555555555433
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=8.5e-25 Score=237.71 Aligned_cols=201 Identities=15% Similarity=0.142 Sum_probs=107.6
Q ss_pred CcchhccCCCcccCCCChhc--cccccccccccccccccCcCC----cccccccccceeecccCCCCCCCCccchhhhcc
Q 042766 150 NLIHFCASNNKLEGQIPKEI--GNLLKLQRLSVDINYLTGQLP----DSVGNLSAIEVIRITENSLGGKIPTTLGLLRRL 223 (914)
Q Consensus 150 ~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 223 (914)
+|++|++++|++++..|..+ +.+++|++|+|++|.+++..| ..+..+++|++|+|++|.+++..|..|+.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 34444444444444444443 444444444444444443333 122344455555555555554444555555555
Q ss_pred cccccccccccCC---C-CCccccccccceeeccCCcccCc--ccccccccCcccceeeccCccCCCCCCCccccc---c
Q 042766 224 VNLNVAENQFSGM---F-PRSICNISSVELIFLTENRFSGI--FPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNA---S 294 (914)
Q Consensus 224 ~~L~Ls~N~l~~~---~-p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~ 294 (914)
++|+|++|++.+. . +..+..+++|++|+|++|+++.. .+..++.++++|++|+|++|++++..|..+..+ +
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~ 251 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSS 251 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCT
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcC
Confidence 5555555554321 1 12234555666666666666421 111234456677777777777766666666555 4
Q ss_pred ccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccC
Q 042766 295 NLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFG 361 (914)
Q Consensus 295 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 361 (914)
+|++|+|++|+|+.+ |..+. ++|++|+|++|+|++.+. +..+++|+.|+|++|+++
T Consensus 252 ~L~~L~Ls~N~l~~l-p~~~~--~~L~~L~Ls~N~l~~~~~--------~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 252 ALNSLNLSFAGLEQV-PKGLP--AKLRVLDLSSNRLNRAPQ--------PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp TCCCEECCSSCCCSC-CSCCC--SCCSCEECCSCCCCSCCC--------TTSCCCCSCEECSSTTTS
T ss_pred cCCEEECCCCCCCch-hhhhc--CCCCEEECCCCcCCCCch--------hhhCCCccEEECcCCCCC
Confidence 777777777777733 44342 577777777777765421 345677777777777775
No 338
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=1.7e-26 Score=254.42 Aligned_cols=268 Identities=15% Similarity=0.195 Sum_probs=162.5
Q ss_pred CCCCCccceeecCCCCceEEEecCCCCCccccCCCCCCC--CCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCC
Q 042766 62 MNFCQWTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNL--SFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSG 139 (914)
Q Consensus 62 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (914)
.-|..|.++.|+. ..++.+|++++.+. +..++.+ +.+++|++++|.+++..|. +.++++|++|+|++|.+++
T Consensus 34 ~vc~~W~~~~~~~--~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 34 GVCKRWYRLASDE--SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp SSCHHHHHHHTCS--TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH
T ss_pred HHHHHHHHHhcCc--hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH
Confidence 3566899998853 34678888887665 3445555 7788888888888766554 5567788888888887775
Q ss_pred c-CCCCccccCCcchhccCCCcccCCCChhccccccccccccccc-cccCc-CCcccccccccceeecccC-CCCCC-CC
Q 042766 140 T-IPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDIN-YLTGQ-LPDSVGNLSAIEVIRITEN-SLGGK-IP 214 (914)
Q Consensus 140 ~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~p 214 (914)
. +|..+..+++|++|+|++|++++..|..++.+++|++|+|++| .+++. +|..+.++++|++|++++| .+++. ++
T Consensus 108 ~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~ 187 (336)
T 2ast_B 108 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQ 187 (336)
T ss_dssp HHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHH
T ss_pred HHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHH
Confidence 5 6666777777777777777777666777777777777777777 56542 5555666666777777766 66543 45
Q ss_pred ccchhhh-ccccccccccc--cc-CCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCcc-CCCCCCCc
Q 042766 215 TTLGLLR-RLVNLNVAENQ--FS-GMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNN-FVGSIPDS 289 (914)
Q Consensus 215 ~~~~~l~-~L~~L~Ls~N~--l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~-l~~~~p~~ 289 (914)
..+..++ +|++|++++|. ++ +.+|..+. ++++|++|+|++|. +++..+..
T Consensus 188 ~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~-------------------------~~~~L~~L~l~~~~~l~~~~~~~ 242 (336)
T 2ast_B 188 VAVAHVSETITQLNLSGYRKNLQKSDLSTLVR-------------------------RCPNLVHLDLSDSVMLKNDCFQE 242 (336)
T ss_dssp HHHHHSCTTCCEEECCSCGGGSCHHHHHHHHH-------------------------HCTTCSEEECTTCTTCCGGGGGG
T ss_pred HHHHhcccCCCEEEeCCCcccCCHHHHHHHHh-------------------------hCCCCCEEeCCCCCcCCHHHHHH
Confidence 5555666 66666666663 32 22333334 44555555555555 44444445
Q ss_pred cccccccccccccCcc-CCccccccccccccccceeccCCcCCCCCCCCcchhhcccCC-CCCcEEeccccccCCCcCch
Q 042766 290 LSNASNLELLDLPSNQ-FKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNC-SSLKVLSLSDNQFGGELPHS 367 (914)
Q Consensus 290 ~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l-~~L~~L~Ls~N~l~~~~p~~ 367 (914)
+..+++|++|+|++|. +.......+..+++|+.|++++| ++. .. +..+ .+|+.|+++.|++++..|..
T Consensus 243 l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~------~~~l~~~l~~L~l~~n~l~~~~~~~ 312 (336)
T 2ast_B 243 FFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPD---GT------LQLLKEALPHLQINCSHFTTIARPT 312 (336)
T ss_dssp GGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCT---TC------HHHHHHHSTTSEESCCCSCCTTCSS
T ss_pred HhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCH---HH------HHHHHhhCcceEEecccCccccCCc
Confidence 5555555555555553 22111124555566666666665 222 11 1111 22445556777777666666
Q ss_pred hhc
Q 042766 368 IAN 370 (914)
Q Consensus 368 ~~~ 370 (914)
+..
T Consensus 313 ~~~ 315 (336)
T 2ast_B 313 IGN 315 (336)
T ss_dssp CSS
T ss_pred ccc
Confidence 554
No 339
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=1.3e-24 Score=236.25 Aligned_cols=225 Identities=16% Similarity=0.132 Sum_probs=187.3
Q ss_pred CCCCEEEcCCCCCcccC-Cc--ccCCCCCCCeeecCCCCCCCcCCCCc--cccCCcchhccCCCcccCCCC----hhccc
Q 042766 101 SFLRYINLADNGFRGDI-PQ--EIGNLFRLEKLALSNNSFSGTIPTNL--SRCSNLIHFCASNNKLEGQIP----KEIGN 171 (914)
Q Consensus 101 ~~L~~L~L~~n~l~~~~-p~--~~~~l~~L~~L~Ls~N~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~~~p----~~~~~ 171 (914)
..++.|.+.++.++... .. .+..+++|++|+|++|++++.+|..+ +.+++|++|+|++|++++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 35788999998886421 11 12235679999999999999999998 999999999999999998666 45567
Q ss_pred cccccccccccccccCcCCcccccccccceeecccCCCCCC--C--CccchhhhcccccccccccccCCCCC----cccc
Q 042766 172 LLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGK--I--PTTLGLLRRLVNLNVAENQFSGMFPR----SICN 243 (914)
Q Consensus 172 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~ 243 (914)
+++|++|+|++|++++..|..|+++++|++|+|++|++.+. + +..++.+++|++|+|++|+++. +|. .+.+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhc
Confidence 89999999999999988889999999999999999998752 2 2345789999999999999973 233 3578
Q ss_pred ccccceeeccCCcccCcccccccccC---cccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccc
Q 042766 244 ISSVELIFLTENRFSGIFPFDILLNL---PNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNL 320 (914)
Q Consensus 244 l~~L~~L~L~~N~l~~~~p~~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 320 (914)
+++|++|+|++|++++..|..+. .+ ++|++|+|++|+|+ .+|..+. ++|++|||++|+|++. |. +..+++|
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~-~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L 296 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAP-RCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEV 296 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCS-SCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCC
T ss_pred CCCCCEEECCCCCCCccchhhHH-hccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCc
Confidence 89999999999999988775554 33 79999999999999 6787775 8999999999999976 32 6888999
Q ss_pred cceeccCCcCCC
Q 042766 321 WLLNLEQNNLGT 332 (914)
Q Consensus 321 ~~L~L~~N~l~~ 332 (914)
+.|+|++|.++.
T Consensus 297 ~~L~L~~N~l~~ 308 (310)
T 4glp_A 297 DNLTLDGNPFLV 308 (310)
T ss_dssp SCEECSSTTTSC
T ss_pred cEEECcCCCCCC
Confidence 999999999875
No 340
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=8.9e-24 Score=220.44 Aligned_cols=200 Identities=17% Similarity=0.193 Sum_probs=152.6
Q ss_pred ccEEEEeecccccccCCccccCCCCCcEEEcccCc-ccccCChhhhcccCCceeeecc-cccccccCccccCCCCCCeEE
Q 042766 374 KMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQ-FHGTIPDVISELKNLQQLSVFN-NFLRGGIPSGLGNLTKLGSLD 451 (914)
Q Consensus 374 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 451 (914)
++++|++++|++++..+..|.++++|++|++++|+ ++++.+..|.++++|++|++++ |.+++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 67788888888887777788888888888888886 7777777788888888888887 888876667788888888888
Q ss_pred eeCCcCCCCCCCccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCC-ccCCCccccccccccce-eecccCCc
Q 042766 452 LGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNN-LLNGSLPLQVGNLKNLV-MLDISSNQ 529 (914)
Q Consensus 452 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~ 529 (914)
+++|++++ +|. +..+++|+.| ++|++++| .+++..+..|.++++|+ .|++++|+
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L----------------------~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~ 167 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIF----------------------FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNG 167 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSE----------------------EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCC
T ss_pred CCCCCCcc-ccc-cccccccccc----------------------cEEECCCCcchhhcCcccccchhcceeEEEcCCCC
Confidence 88888875 554 6666655410 24555555 55545556688888899 99999999
Q ss_pred cccccCccccccccccEEEeeccc-ccccCCcchhcc-CCCCEEEccCCccccccCccccccCCCCeEeCCCCc
Q 042766 530 FSGVIPVTLSTCVSLEYLDISINS-FYGVIPLSFRFL-KSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNY 601 (914)
Q Consensus 530 l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 601 (914)
++.+.+..|.. ++|+.|+|++|+ +++..+..|..+ ++|+.|++++|++++..+. .+++|+.|+++++.
T Consensus 168 l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 168 FTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNTW 237 (239)
T ss_dssp CCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC-
T ss_pred CcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCcc
Confidence 98555555555 889999999995 887778888888 8999999999999854443 56778888888763
No 341
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=2e-26 Score=258.87 Aligned_cols=249 Identities=19% Similarity=0.222 Sum_probs=115.0
Q ss_pred CCCCCCCCCCCEEEcCCCCCccc----CCcccCCCCCCCeeecCCC---CCCCcCCCCc-------cccCCcchhccCCC
Q 042766 94 SPYVGNLSFLRYINLADNGFRGD----IPQEIGNLFRLEKLALSNN---SFSGTIPTNL-------SRCSNLIHFCASNN 159 (914)
Q Consensus 94 ~~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N---~l~~~~p~~l-------~~l~~L~~L~Ls~N 159 (914)
+..+..+++|++|+|++|.+++. ++..+.++++|++|+|++| ++++.+|..+ ..+++|++|+|++|
T Consensus 25 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n 104 (386)
T 2ca6_A 25 FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN 104 (386)
T ss_dssp SHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCC
Confidence 34455556666666666666544 2333556666666666663 3334444433 34455555555555
Q ss_pred cccC----CCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhh---------hccccc
Q 042766 160 KLEG----QIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLL---------RRLVNL 226 (914)
Q Consensus 160 ~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l---------~~L~~L 226 (914)
++++ .+|..+..+++|++|+|++|.+++..+..+.. .+..+ ++|++|
T Consensus 105 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~--------------------~l~~l~~~~~~~~~~~L~~L 164 (386)
T 2ca6_A 105 AFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR--------------------ALQELAVNKKAKNAPPLRSI 164 (386)
T ss_dssp CCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHH--------------------HHHHHHHHHHHHTCCCCCEE
T ss_pred cCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHH--------------------HHHHHhhhhhcccCCCCcEE
Confidence 5543 23444444444555555544443222222211 11112 444444
Q ss_pred cccccccc-CCCC---CccccccccceeeccCCcccCc----ccccccccCcccceeeccCccCC----CCCCCcccccc
Q 042766 227 NVAENQFS-GMFP---RSICNISSVELIFLTENRFSGI----FPFDILLNLPNLKKLGIGGNNFV----GSIPDSLSNAS 294 (914)
Q Consensus 227 ~Ls~N~l~-~~~p---~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~ 294 (914)
+|++|+++ +.+| ..+..+++|++|+|++|+++.. +....+..+++|++|+|++|.++ +.+|..+..++
T Consensus 165 ~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~ 244 (386)
T 2ca6_A 165 ICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP 244 (386)
T ss_dssp ECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT
T ss_pred ECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCC
Confidence 44444443 2222 2333444455555555544411 01112234455555555555553 33445555555
Q ss_pred ccccccccCccCCcc----ccccc--cccccccceeccCCcCCCCCCCCcchhhcc-cCCCCCcEEeccccccCCCc
Q 042766 295 NLELLDLPSNQFKGK----VSIDF--SSLKNLWLLNLEQNNLGTGTANDLDFVIFL-SNCSSLKVLSLSDNQFGGEL 364 (914)
Q Consensus 295 ~L~~L~Ls~N~l~~~----~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l-~~l~~L~~L~Ls~N~l~~~~ 364 (914)
+|++|+|++|+|++. ++..+ +.+++|++|+|++|.++..... .+|..+ .++++|++|+|++|++++..
T Consensus 245 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~--~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 245 NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVR--TLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp TCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHH--HHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHH--HHHHHHHhcCCCceEEEccCCcCCcch
Confidence 555555555555543 22333 2255555555555555431000 023333 34566666666666665444
No 342
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=2.2e-24 Score=250.71 Aligned_cols=205 Identities=25% Similarity=0.351 Sum_probs=138.5
Q ss_pred CCCCCCCCCC-----Cccce-eecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCe
Q 042766 56 SSWNNTMNFC-----QWTGV-TCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEK 129 (914)
Q Consensus 56 ~~w~~~~~~c-----~w~gv-~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 129 (914)
.+|..+.++| .|.|+ .|.. .+++.|+|++|++++ +|+.+. ++|++|+|++|+|+ .+| +.+++|++
T Consensus 34 ~~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 34 DKWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 4565556677 79999 7853 468889999999877 777664 78999999999988 677 45788899
Q ss_pred eecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCC
Q 042766 130 LALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSL 209 (914)
Q Consensus 130 L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 209 (914)
|+|++|+|++ +|. +.. +|++|+|++|++++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|.|
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQL 172 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCC
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCC
Confidence 9999998885 777 655 88888888888886 666 56788888888888875 555 466777777777777
Q ss_pred CCCCCccchhhhcccccccccccccCCCCCcccccccc-------ceeeccCCcccCcccccccccCcccceeeccCccC
Q 042766 210 GGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSV-------ELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNF 282 (914)
Q Consensus 210 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l 282 (914)
++ +|. |. ++|++|+|++|+|+ .+|. |.. +| +.|+|++|+|+. +|..++ .+++|++|+|++|.+
T Consensus 173 ~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~-~l~~L~~L~L~~N~l 242 (571)
T 3cvr_A 173 TF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITH-IPENIL-SLDPTCTIILEDNPL 242 (571)
T ss_dssp SC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCC-CCGGGG-GSCTTEEEECCSSSC
T ss_pred CC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCccee-cCHHHh-cCCCCCEEEeeCCcC
Confidence 75 555 55 67777777777777 4444 433 44 444444444442 333333 244444444444444
Q ss_pred CCCCCCccc
Q 042766 283 VGSIPDSLS 291 (914)
Q Consensus 283 ~~~~p~~~~ 291 (914)
++.+|..+.
T Consensus 243 ~~~~p~~l~ 251 (571)
T 3cvr_A 243 SSRIRESLS 251 (571)
T ss_dssp CHHHHHHHH
T ss_pred CCcCHHHHH
Confidence 444444333
No 343
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=3.2e-25 Score=244.23 Aligned_cols=257 Identities=17% Similarity=0.202 Sum_probs=176.3
Q ss_pred CCCEEEcCCCCCcccCCcccCCC--CCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCC-CChhcccccccccc
Q 042766 102 FLRYINLADNGFRGDIPQEIGNL--FRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQ-IPKEIGNLLKLQRL 178 (914)
Q Consensus 102 ~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L 178 (914)
.++.+++++|.+. |..+..+ ++++.|++++|.+++..|. +..+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3678888887776 4455666 7788888888887755444 55677777777777777654 66666667777777
Q ss_pred ccccccccCcCCcccccccccceeecccC-CCCCC-CCccchhhhcccccccccccccCCCCCccccccccceeeccCC-
Q 042766 179 SVDINYLTGQLPDSVGNLSAIEVIRITEN-SLGGK-IPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTEN- 255 (914)
Q Consensus 179 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N- 255 (914)
+|++|.+++..|..++.+++|++|+|++| .+++. +|..+.. +++|++|++++|
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~------------------------~~~L~~L~l~~~~ 179 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSS------------------------CSRLDELNLSWCF 179 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHH------------------------CTTCCEEECCCCT
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhc------------------------CCCCCEEcCCCCC
Confidence 77777666666666666666666666666 44431 3333444 445555555555
Q ss_pred cccCcccccccccCc-ccceeeccCc--cCC-CCCCCccccccccccccccCcc-CCccccccccccccccceeccCCcC
Q 042766 256 RFSGIFPFDILLNLP-NLKKLGIGGN--NFV-GSIPDSLSNASNLELLDLPSNQ-FKGKVSIDFSSLKNLWLLNLEQNNL 330 (914)
Q Consensus 256 ~l~~~~p~~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l 330 (914)
.+++......+..++ +|++|+|++| .++ +.+|..+..+++|++|+|++|. +++..+..+..+++|++|++++|.
T Consensus 180 ~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~- 258 (336)
T 2ast_B 180 DFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY- 258 (336)
T ss_dssp TCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT-
T ss_pred CcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC-
Confidence 444321123344677 7888888887 444 3566778889999999999999 887888899999999999999996
Q ss_pred CCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccC
Q 042766 331 GTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRN 395 (914)
Q Consensus 331 ~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~ 395 (914)
..... ....+..+++|+.|++++| ++. ..+..+...+..|+++.|++++..|..++.
T Consensus 259 -~~~~~---~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 259 -DIIPE---TLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp -TCCGG---GGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred -CCCHH---HHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCcccc
Confidence 22111 2235788999999999999 432 233444334777889999999999988775
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=3.5e-25 Score=248.82 Aligned_cols=247 Identities=21% Similarity=0.249 Sum_probs=168.4
Q ss_pred hhhcccCCCCCcEEeccccccCCCcCch----hhccccccEEEEeecc---cccccCCccc-------cCCCCCcEEEcc
Q 042766 340 FVIFLSNCSSLKVLSLSDNQFGGELPHS----IANLSLKMIELSVGRN---QISGTIPPGI-------RNLVNLITFTLE 405 (914)
Q Consensus 340 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~----~~~~~~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~L~ 405 (914)
++..+..+++|+.|+|++|++++..+.. +..+. +|+.|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~-~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKK-DLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCT-TCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCC-CccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 3445677788888888888887554433 33333 5777777764 4444455444 566677777777
Q ss_pred cCcccc----cCChhhhcccCCceeeecccccccccCcccc----CC---------CCCCeEEeeCCcCC-CCCC---Cc
Q 042766 406 VNQFHG----TIPDVISELKNLQQLSVFNNFLRGGIPSGLG----NL---------TKLGSLDLGSNSLQ-GNIP---SS 464 (914)
Q Consensus 406 ~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~Ls~N~l~-~~~p---~~ 464 (914)
+|++++ .+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +.+| ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 777765 3556666667777777777776544333333 22 66666666666665 2333 24
Q ss_pred cCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccc----cccCccccc
Q 042766 465 LGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFS----GVIPVTLST 540 (914)
Q Consensus 465 ~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~ 540 (914)
+..+++|+.|++++|+++. ..+. ...|..+..+++|+.|+|++|+++ +.+|..+..
T Consensus 183 l~~~~~L~~L~L~~n~l~~---~g~~-----------------~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~ 242 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRP---EGIE-----------------HLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 242 (386)
T ss_dssp HHHCTTCCEEECCSSCCCH---HHHH-----------------HHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred HHhCCCcCEEECcCCCCCH---hHHH-----------------HHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHcc
Confidence 4455555555555555431 0000 023446778899999999999996 677888999
Q ss_pred cccccEEEeeccccccc----CCcchhc--cCCCCEEEccCCcccc----ccCccc-cccCCCCeEeCCCCccccccC
Q 042766 541 CVSLEYLDISINSFYGV----IPLSFRF--LKSIKALNVSSNNLSG----KIPEFL-ENLSFLEFLNLSYNYFEGEVP 607 (914)
Q Consensus 541 l~~L~~L~Ls~N~l~~~----~p~~~~~--l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~ls~N~l~~~~p 607 (914)
+++|++|+|++|.+++. +|..+.. +++|+.|+|++|++++ .+|..+ .++++|++|++++|++++..|
T Consensus 243 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 99999999999999876 5666644 8999999999999998 488877 668999999999999986654
No 345
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=3e-23 Score=229.41 Aligned_cols=203 Identities=15% Similarity=0.098 Sum_probs=115.0
Q ss_pred CCccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCC-
Q 042766 65 CQWTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPT- 143 (914)
Q Consensus 65 c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~- 143 (914)
|+|..|.|+. ++++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|.
T Consensus 9 C~~~~v~C~~------------~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 9 CSNRVFLCQE------------SKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp EETTEEEEES------------TTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred eeCCEEEecC------------CCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 6777777753 3343 345544 25678888888888744445678888888888888887666654
Q ss_pred CccccCCcch-hccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeeccc-CCCCCCCCccchhhh
Q 042766 144 NLSRCSNLIH-FCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITE-NSLGGKIPTTLGLLR 221 (914)
Q Consensus 144 ~l~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~ 221 (914)
.|.++++|++ ++++.|+++...|..|..+++|++|++++|++++..+..+....++..|++.+ |.+....+.+|..+.
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~ 153 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 153 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc
Confidence 4566666554 55556777655566677777777777777777655555555555666666644 345444444444443
Q ss_pred -cccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCC
Q 042766 222 -RLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFV 283 (914)
Q Consensus 222 -~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 283 (914)
.++.|+|++|+|+.+.+..| ...+|+.|++++|+..+.+|.+.|.++++|++|+|++|+|+
T Consensus 154 ~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 154 FESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp SSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred hhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 35555555555553222222 23344444444322222334444444444444444444444
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=3.7e-23 Score=228.69 Aligned_cols=240 Identities=19% Similarity=0.170 Sum_probs=192.4
Q ss_pred CEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCCh-hccccccccc-cccc
Q 042766 104 RYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPK-EIGNLLKLQR-LSVD 181 (914)
Q Consensus 104 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~-L~L~ 181 (914)
+.++.++++++ .+|..+. +++++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. +|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 56788999999 8888773 6899999999999944445789999999999999998776664 6888988775 6677
Q ss_pred cccccCcCCcccccccccceeecccCCCCCCCCccchhhhccccccccc-ccccCCCCCcccccc-ccceeeccCCcccC
Q 042766 182 INYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAE-NQFSGMFPRSICNIS-SVELIFLTENRFSG 259 (914)
Q Consensus 182 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~ 259 (914)
.|++++..|+.|.++++|++|++++|++++..+..+....++..|++.+ |++....+..|..+. .++.|+|++|+|+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 8999988888999999999999999999977777777888888899865 577766677777765 68889999999985
Q ss_pred cccccccccCcccceeeccC-ccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCc
Q 042766 260 IFPFDILLNLPNLKKLGIGG-NNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDL 338 (914)
Q Consensus 260 ~~p~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 338 (914)
+|...| ..++|++|++++ |.++.+.++.|..+++|++|||++|+|+.+++..|.++++|+.+++ ++++..+
T Consensus 169 -i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~~lP---- 240 (350)
T 4ay9_X 169 -IHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKLP---- 240 (350)
T ss_dssp -ECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCCCCC----
T ss_pred -CChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcCcCC----
Confidence 565666 567899999975 6676555567899999999999999999888877887777777665 3444432
Q ss_pred chhhcccCCCCCcEEecccc
Q 042766 339 DFVIFLSNCSSLKVLSLSDN 358 (914)
Q Consensus 339 ~~~~~l~~l~~L~~L~Ls~N 358 (914)
.+.++++|+.++++++
T Consensus 241 ----~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 241 ----TLEKLVALMEASLTYP 256 (350)
T ss_dssp ----CTTTCCSCCEEECSCH
T ss_pred ----CchhCcChhhCcCCCC
Confidence 2567888888888765
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=3.5e-23 Score=224.37 Aligned_cols=194 Identities=24% Similarity=0.369 Sum_probs=126.5
Q ss_pred CCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccc
Q 042766 98 GNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQR 177 (914)
Q Consensus 98 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 177 (914)
..+++|++|++++|+++ .+| .+..+++|++|+|++|++++. |. +..+++|++|+|++|++++ +| .+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCE
Confidence 34667777777777776 355 577777777777777777743 33 7777777777777777764 33 5677777777
Q ss_pred cccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcc
Q 042766 178 LSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRF 257 (914)
Q Consensus 178 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 257 (914)
|+|++|++++ +|. +..+++|++|++++|.+++..+ ++.+++|++|+|++|++++..+ +..+++|+.|++++|++
T Consensus 112 L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 112 LDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKI 185 (308)
T ss_dssp EECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCcc
Confidence 7777777764 332 6677777777777777765433 6666777777777777665433 66666666666666666
Q ss_pred cCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCc
Q 042766 258 SGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKG 308 (914)
Q Consensus 258 ~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 308 (914)
++..+ +..+++|++|+|++|++++.. .+..+++|+.|+|++|++++
T Consensus 186 ~~~~~---l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 186 SDISP---LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCGG---GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred CcChh---hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 65432 345666666666666666443 25566666666666666654
No 348
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=1.1e-22 Score=213.80 Aligned_cols=182 Identities=19% Similarity=0.176 Sum_probs=146.3
Q ss_pred CCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccC
Q 042766 398 NLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIAS 477 (914)
Q Consensus 398 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 477 (914)
+.++++++++.++. +|..+. ++++.|+|++|.+++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+++
T Consensus 15 ~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 46678888888873 444332 577888888888887777777888888888888888877777777777777666666
Q ss_pred CCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeeccccccc
Q 042766 478 YNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGV 557 (914)
Q Consensus 478 ~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 557 (914)
+|+++ +..+..|..+++|++|+|++|++++.++..|..+++|++|+|++|++++.
T Consensus 92 ~n~l~-------------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 146 (251)
T 3m19_A 92 NNQLA-------------------------SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI 146 (251)
T ss_dssp TSCCC-------------------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCccc-------------------------ccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCcc
Confidence 66554 34455677888999999999999988887888999999999999999988
Q ss_pred CCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccC
Q 042766 558 IPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVP 607 (914)
Q Consensus 558 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 607 (914)
.+..|..+++|+.|+|++|+|++..|..+..+++|+.|+|++|+|+|.+.
T Consensus 147 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 147 PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 88889999999999999999998888889999999999999999998743
No 349
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=3.2e-23 Score=224.67 Aligned_cols=205 Identities=22% Similarity=0.333 Sum_probs=113.4
Q ss_pred cCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccC
Q 042766 108 LADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTG 187 (914)
Q Consensus 108 L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 187 (914)
+..+.+++.++ +..+++|++|++++|.++ .+| .+..+++|++|+|++|++++. +. +..+++|++|+|++|++++
T Consensus 26 l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~ 99 (308)
T 1h6u_A 26 AGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN 99 (308)
T ss_dssp TTCSSTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC
T ss_pred hCCCCcCceec--HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC
Confidence 34444443322 345667777777777776 344 566677777777777777643 33 6666667777777666664
Q ss_pred cCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccc
Q 042766 188 QLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILL 267 (914)
Q Consensus 188 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 267 (914)
+| .+..+++|++|++++|.+++. |. +..+++|++|++++|++++..+ +..+++|
T Consensus 100 -~~-~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L-------------------- 153 (308)
T 1h6u_A 100 -VS-AIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNL-------------------- 153 (308)
T ss_dssp -CG-GGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTC--------------------
T ss_pred -ch-hhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCc--------------------
Confidence 22 456666666666666666542 22 5555555555555555554322 4444444
Q ss_pred cCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCC
Q 042766 268 NLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNC 347 (914)
Q Consensus 268 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l 347 (914)
++|+|++|++++..+ +..+++|+.|+|++|++++..+ +..+++|++|++++|++++.+ .+..+
T Consensus 154 -----~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--------~l~~l 216 (308)
T 1h6u_A 154 -----QYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--------PLANT 216 (308)
T ss_dssp -----CEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--------GGTTC
T ss_pred -----cEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--------cccCC
Confidence 444555554443222 4455555555555555554433 455555555555555555431 14556
Q ss_pred CCCcEEeccccccC
Q 042766 348 SSLKVLSLSDNQFG 361 (914)
Q Consensus 348 ~~L~~L~Ls~N~l~ 361 (914)
++|+.|+|++|+++
T Consensus 217 ~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 217 SNLFIVTLTNQTIT 230 (308)
T ss_dssp TTCCEEEEEEEEEE
T ss_pred CCCCEEEccCCeee
Confidence 66666666666665
No 350
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=3.4e-23 Score=220.73 Aligned_cols=151 Identities=17% Similarity=0.170 Sum_probs=119.5
Q ss_pred HHHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC------------------cchHHHHHHHHHHHhcC
Q 042766 699 ELSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK------------------GASKSFVSECEALRNIR 760 (914)
Q Consensus 699 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~ 760 (914)
.+......|++.+.||+|+||.||+|++ .+++.||+|+++.... .....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 3344455677789999999999999999 7899999999964321 12456899999999999
Q ss_pred CCCcceEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEec
Q 042766 761 HRNLIKIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHG 840 (914)
Q Consensus 761 h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHr 840 (914)
| +++.+++.. +..++||||++||+|.+ +... +...++.|++.|++|||+. +|+||
T Consensus 163 ~---~~v~~~~~~------~~~~lvmE~~~g~~L~~-l~~~------------~~~~i~~qi~~~l~~lH~~---giiHr 217 (282)
T 1zar_A 163 G---LAVPKVYAW------EGNAVLMELIDAKELYR-VRVE------------NPDEVLDMILEEVAKFYHR---GIVHG 217 (282)
T ss_dssp T---SSSCCEEEE------ETTEEEEECCCCEEGGG-CCCS------------CHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred C---CCcCeEEec------cceEEEEEecCCCcHHH-cchh------------hHHHHHHHHHHHHHHHHHC---CCEeC
Confidence 5 444444321 24589999999999988 4321 2346999999999999999 99999
Q ss_pred CCCCCCeeecCCCcEEEecccccccccccccccccCCCCccccccCcccccccchhh
Q 042766 841 DLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLDIASKTPSSSIGIKGTVGYVAPGKFF 897 (914)
Q Consensus 841 Dlkp~NILl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~y~APE~~~ 897 (914)
||||+|||++ ++.+||+|||+|+. +..|+|||++.
T Consensus 218 Dlkp~NILl~-~~~vkl~DFG~a~~---------------------~~~~~a~e~l~ 252 (282)
T 1zar_A 218 DLSQYNVLVS-EEGIWIIDFPQSVE---------------------VGEEGWREILE 252 (282)
T ss_dssp CCSTTSEEEE-TTEEEECCCTTCEE---------------------TTSTTHHHHHH
T ss_pred CCCHHHEEEE-CCcEEEEECCCCeE---------------------CCCCCHHHHHH
Confidence 9999999999 99999999999863 34688999984
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=3e-22 Score=204.04 Aligned_cols=186 Identities=19% Similarity=0.247 Sum_probs=110.0
Q ss_pred CCCCccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCC
Q 042766 63 NFCQWTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIP 142 (914)
Q Consensus 63 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 142 (914)
..|.|.+|.|+.. +++ .+|..+ .++|++|++++|++++..+..++++++|++|+|++|++++..+
T Consensus 5 C~C~~~~v~c~~~------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (208)
T 2o6s_A 5 CSCSGTTVECYSQ------------GRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPN 69 (208)
T ss_dssp CEEETTEEECCSS------------CCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CEECCCEEEecCC------------Ccc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccCh
Confidence 4589999999642 222 233332 3467777777777775555566777777777777777774444
Q ss_pred CCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhc
Q 042766 143 TNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRR 222 (914)
Q Consensus 143 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 222 (914)
..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++. .+..|..+++
T Consensus 70 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~------------------------~~~~~~~l~~ 125 (208)
T 2o6s_A 70 GVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSL------------------------PDGVFDKLTQ 125 (208)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC------------------------CTTTTTTCTT
T ss_pred hhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCccc------------------------CHhHhccCCc
Confidence 4456666666666666666644444445555555555555555543 3334444455
Q ss_pred ccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccc
Q 042766 223 LVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASN 295 (914)
Q Consensus 223 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 295 (914)
|++|+|++|++++..+..|..+++|++|++++|.+.+ .+++|++|+++.|+++|.+|..++.++.
T Consensus 126 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~--------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 126 LKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC--------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC--------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCEEECCCCccceeCHHHhccCCCccEEEecCCCeec--------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 5555555555554444445555556666666665543 3456667777777777777776665544
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=3.9e-22 Score=203.17 Aligned_cols=185 Identities=18% Similarity=0.191 Sum_probs=155.7
Q ss_pred CCCCCCCCCCCCCCccceeecC--CCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCee
Q 042766 53 GVTSSWNNTMNFCQWTGVTCGH--RHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKL 130 (914)
Q Consensus 53 ~~~~~w~~~~~~c~w~gv~C~~--~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 130 (914)
....+|. +.+ |...|.+.-. ...+++.|+|++|.+++..+..++.+++|++|+|++|++++..+..+.++++|++|
T Consensus 4 ~C~C~~~-~v~-c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 81 (208)
T 2o6s_A 4 RCSCSGT-TVE-CYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYL 81 (208)
T ss_dssp TCEEETT-EEE-CCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCEECCC-EEE-ecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEE
Confidence 3345675 333 5555543321 23478999999999987666678999999999999999997666778999999999
Q ss_pred ecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCC
Q 042766 131 ALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLG 210 (914)
Q Consensus 131 ~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 210 (914)
+|++|++++..+..++.+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|++|++++|.+.
T Consensus 82 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 82 NLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred ECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 99999999766677899999999999999999777778999999999999999999777777999999999999999887
Q ss_pred CCCCccchhhhcccccccccccccCCCCCccccccc
Q 042766 211 GKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISS 246 (914)
Q Consensus 211 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 246 (914)
+. +++|++|+++.|+++|.+|..++.+..
T Consensus 162 ~~-------~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 162 CT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CC-------TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred cC-------CCCHHHHHHHHHhCCceeeccCccccC
Confidence 54 457999999999999999998887654
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=5.5e-22 Score=230.56 Aligned_cols=189 Identities=22% Similarity=0.312 Sum_probs=154.4
Q ss_pred CCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccc
Q 042766 102 FLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVD 181 (914)
Q Consensus 102 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 181 (914)
+|++|+|++|++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +++ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999996 887764 78999999999999 788 557999999999999996 777 766 89999999
Q ss_pred cccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcc
Q 042766 182 INYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIF 261 (914)
Q Consensus 182 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 261 (914)
+|++++ +|. .+++|++|+|++|.+++ +|. .+++|++|+|++|+|++ +|. |. ++|++|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 999996 666 67899999999999986 665 57889999999999987 566 65 88999999999988 45
Q ss_pred cccccccCccc-------ceeeccCccCCCCCCCccccccccccccccCccCCcccccccccccc
Q 042766 262 PFDILLNLPNL-------KKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKN 319 (914)
Q Consensus 262 p~~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 319 (914)
|. +. . +| ++|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..|..++.
T Consensus 196 p~-~~-~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 196 PA-VP-V--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CC-CC-----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hh-HH-H--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 54 32 2 66 88888888888 57777777888888888888888887777665543
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.86 E-value=5.5e-23 Score=248.08 Aligned_cols=218 Identities=20% Similarity=0.225 Sum_probs=93.8
Q ss_pred CCHhHHHHHHHHHHhcC-CCCCCCCCCC-CCCCCCCccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCC
Q 042766 33 TNETDRLALLAIKSQLH-DPSGVTSSWN-NTMNFCQWTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLAD 110 (914)
Q Consensus 33 ~~~~~~~aLl~~k~~~~-~~~~~~~~w~-~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~ 110 (914)
..+.++++|+++..... +....-..|. ..+..+.|.+++++. .+++.|+|.++.+... +..+ |+.++|+.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~-~~~~-----l~~l~Ls~ 200 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDEA-NQAL-----LQHKKLSQ 200 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCcc-hhhH-----hhcCccCc
Confidence 46778999999998875 2223334564 334567899998853 6789999998887653 3332 34444554
Q ss_pred CCCcc---------cCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccc
Q 042766 111 NGFRG---------DIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVD 181 (914)
Q Consensus 111 n~l~~---------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 181 (914)
|.|.+ ..|..+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|+|+ .+|..|+++++|++|+|+
T Consensus 201 ~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls 278 (727)
T 4b8c_D 201 YSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLS 278 (727)
T ss_dssp ---------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECT
T ss_pred ccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCc
Confidence 44442 34555666666666666666666 56666666666666666666666 566666666666666666
Q ss_pred cccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCcccccccc-ceeeccCCcccCc
Q 042766 182 INYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSV-ELIFLTENRFSGI 260 (914)
Q Consensus 182 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-~~L~L~~N~l~~~ 260 (914)
+|+|+ .+|..|++|++|++|+|++|.|+ .+|..|+.+++|++|+|++|.|++.+|..+..+... ..|+|++|.+++.
T Consensus 279 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~ 356 (727)
T 4b8c_D 279 HNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIP 356 (727)
T ss_dssp TSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred CCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCc
Confidence 66666 55666666666666666666665 455556666666666666666655555554433221 2244555555544
Q ss_pred cc
Q 042766 261 FP 262 (914)
Q Consensus 261 ~p 262 (914)
+|
T Consensus 357 ~p 358 (727)
T 4b8c_D 357 LP 358 (727)
T ss_dssp CC
T ss_pred Cc
Confidence 33
No 355
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=6.4e-21 Score=197.05 Aligned_cols=163 Identities=19% Similarity=0.221 Sum_probs=114.5
Q ss_pred CCCCCCCCCCccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCC
Q 042766 57 SWNNTMNFCQWTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNS 136 (914)
Q Consensus 57 ~w~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 136 (914)
-|..+.+.|+|++|.|+.. ++ +.+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 11 ~~~~~~~~Cs~~~v~c~~~------------~l-~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~ 75 (229)
T 3e6j_A 11 AACPSQCSCSGTTVDCRSK------------RH-ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQ 75 (229)
T ss_dssp CCCCTTCEEETTEEECTTS------------CC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ccCCCCCEEeCCEeEccCC------------Cc-CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCC
Confidence 3555778999999999642 22 23454443 778888888888887778888888888888888888
Q ss_pred CCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCcc
Q 042766 137 FSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTT 216 (914)
Q Consensus 137 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 216 (914)
|++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|++++..+..
T Consensus 76 l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~ 154 (229)
T 3e6j_A 76 LGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGA 154 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTT
T ss_pred CCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHH
Confidence 87444455677777777777777777655556677777777777777777 56666666666666666666666555555
Q ss_pred chhhhcccccccccccccC
Q 042766 217 LGLLRRLVNLNVAENQFSG 235 (914)
Q Consensus 217 ~~~l~~L~~L~Ls~N~l~~ 235 (914)
|..+++|+.|+|++|.+.+
T Consensus 155 ~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 155 FDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp TTTCTTCCEEECTTSCBCT
T ss_pred HhCCCCCCEEEeeCCCccC
Confidence 6666666666666666554
No 356
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.84 E-value=1.3e-23 Score=245.81 Aligned_cols=207 Identities=19% Similarity=0.167 Sum_probs=146.9
Q ss_pred CCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCc-------------ccCCCChhccccccccccc-cccccccC
Q 042766 122 GNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNK-------------LEGQIPKEIGNLLKLQRLS-VDINYLTG 187 (914)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~ 187 (914)
..+++|+.|+|++|+++ .+|.+++++++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 67888999999999997 889999999999999997775 5667788888888999888 7777543
Q ss_pred cCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccc
Q 042766 188 QLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILL 267 (914)
Q Consensus 188 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 267 (914)
.|+.+.+++|.++...+ ..|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|.. +.
T Consensus 424 ----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~-~~ 483 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPA-LA 483 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGG-GG
T ss_pred ----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchh-hh
Confidence 45556666666553221 236777777777775 454 777777777777777777 45543 34
Q ss_pred cCcccceeeccCccCCCCCCCccccccccccccccCccCCccc-cccccccccccceeccCCcCCCCCCCCcchhhcccC
Q 042766 268 NLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKV-SIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSN 346 (914)
Q Consensus 268 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~ 346 (914)
++++|++|+|++|+|++ +| .++.+++|++|+|++|+|++.. |..|..+++|+.|+|++|.+++.+.. ....+..
T Consensus 484 ~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~---~~~l~~~ 558 (567)
T 1dce_A 484 ALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI---QERLAEM 558 (567)
T ss_dssp GCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC---TTHHHHH
T ss_pred cCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH---HHHHHHH
Confidence 77777777777777775 45 6777777777777777777766 77777777777777777777765432 1122345
Q ss_pred CCCCcEEec
Q 042766 347 CSSLKVLSL 355 (914)
Q Consensus 347 l~~L~~L~L 355 (914)
+++|+.|++
T Consensus 559 lp~L~~L~l 567 (567)
T 1dce_A 559 LPSVSSILT 567 (567)
T ss_dssp CTTCSEEEC
T ss_pred CcccCccCC
Confidence 777777764
No 357
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=4.4e-21 Score=196.86 Aligned_cols=159 Identities=20% Similarity=0.133 Sum_probs=129.1
Q ss_pred ceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCC-CccCCCCCccccccCCCccCCCCchhhhcccchhhhhccc
Q 042766 424 QQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIP-SSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLS 502 (914)
Q Consensus 424 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls 502 (914)
+.+++++|.++ .+|..+. ..+++|+|++|+|++..| ..|.++++|+.|++++|
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N----------------------- 67 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNN----------------------- 67 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSS-----------------------
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCC-----------------------
Confidence 46777777776 3555443 345677777777775543 34566666655555554
Q ss_pred CCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCcccccc
Q 042766 503 NNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKI 582 (914)
Q Consensus 503 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 582 (914)
+|++..+..|.++++|++|+|++|++++.+|..|..+++|++|+|++|++++..|..|..+++|+.|+|++|+|++..
T Consensus 68 --~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 145 (220)
T 2v70_A 68 --KITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVA 145 (220)
T ss_dssp --CCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBC
T ss_pred --cCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEEC
Confidence 444455667889999999999999999998889999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCeEeCCCCccccccCCCC
Q 042766 583 PEFLENLSFLEFLNLSYNYFEGEVPVKG 610 (914)
Q Consensus 583 p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 610 (914)
|..|..+++|+.|+|++|+|+|.++..+
T Consensus 146 ~~~~~~l~~L~~L~L~~N~l~c~c~l~~ 173 (220)
T 2v70_A 146 PGAFDTLHSLSTLNLLANPFNCNCYLAW 173 (220)
T ss_dssp TTTTTTCTTCCEEECCSCCEECSGGGHH
T ss_pred HHHhcCCCCCCEEEecCcCCcCCCchHH
Confidence 9999999999999999999999998654
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=1.9e-20 Score=220.29 Aligned_cols=196 Identities=21% Similarity=0.331 Sum_probs=109.7
Q ss_pred CEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccc
Q 042766 104 RYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDIN 183 (914)
Q Consensus 104 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 183 (914)
..++++.+.+...++ +..|++|+.|+|++|.++ .+| .+..+++|+.|+|++|++++..| +..+++|++|+|++|
T Consensus 24 ~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N 97 (605)
T 1m9s_A 24 IKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDEN 97 (605)
T ss_dssp HHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred HHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCC
Confidence 334444444443322 344555556666666555 333 35555666666666666554332 555666666666666
Q ss_pred cccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccc
Q 042766 184 YLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPF 263 (914)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 263 (914)
.+++ +| .+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++..|
T Consensus 98 ~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 98 KIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 170 (605)
T ss_dssp CCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-
T ss_pred CCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-
Confidence 6653 22 455666666666666666542 2355666666666666666643 455666666666666666665544
Q ss_pred cccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccc
Q 042766 264 DILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSS 316 (914)
Q Consensus 264 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 316 (914)
+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.+...+..
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~ 219 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSN 219 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSS
T ss_pred --hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCccccccc
Confidence 44566666666666666643 24666666666666666666544433333
No 359
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=2.6e-22 Score=234.66 Aligned_cols=206 Identities=19% Similarity=0.213 Sum_probs=166.7
Q ss_pred cccCCcchhccCCCcccCCCChhcccccccccccccccc-------------ccCcCCcccccccccceee-cccCCCCC
Q 042766 146 SRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINY-------------LTGQLPDSVGNLSAIEVIR-ITENSLGG 211 (914)
Q Consensus 146 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~ 211 (914)
..+++|+.|+|++|+++ .+|+.++++++|++|++++|. +.+..|..++++++|+.|+ ++.|.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~--- 421 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAY--- 421 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHH---
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcc---
Confidence 67889999999999998 889999999999999998876 5566677777777887777 55553
Q ss_pred CCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccc
Q 042766 212 KIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLS 291 (914)
Q Consensus 212 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 291 (914)
+..|..+.+++|.++...+. .|+.|+|++|.|++ +|. +.++++|++|+|++|+|+ .+|..|+
T Consensus 422 --------~~~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~-lp~--~~~l~~L~~L~Ls~N~l~-~lp~~~~ 483 (567)
T 1dce_A 422 --------LDDLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTV-LCH--LEQLLLVTHLDLSHNRLR-ALPPALA 483 (567)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSS-CCC--GGGGTTCCEEECCSSCCC-CCCGGGG
T ss_pred --------cchhhhhhhhcccccccCcc------CceEEEecCCCCCC-CcC--ccccccCcEeecCccccc-ccchhhh
Confidence 34677777888887754332 48899999999997 464 678999999999999999 7899999
Q ss_pred cccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCch--hh
Q 042766 292 NASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHS--IA 369 (914)
Q Consensus 292 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~--~~ 369 (914)
.+++|+.|+|++|+|+++ | .|..+++|++|+|++|+|++.. .|..+..+++|+.|+|++|++++..|.. +.
T Consensus 484 ~l~~L~~L~Ls~N~l~~l-p-~l~~l~~L~~L~Ls~N~l~~~~-----~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~ 556 (567)
T 1dce_A 484 ALRCLEVLQASDNALENV-D-GVANLPRLQELLLCNNRLQQSA-----AIQPLVSCPRLVLLNLQGNSLCQEEGIQERLA 556 (567)
T ss_dssp GCTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSSCCCSSS-----TTGGGGGCTTCCEEECTTSGGGGSSSCTTHHH
T ss_pred cCCCCCEEECCCCCCCCC-c-ccCCCCCCcEEECCCCCCCCCC-----CcHHHhcCCCCCEEEecCCcCCCCccHHHHHH
Confidence 999999999999999984 5 7999999999999999998862 1667889999999999999999665532 22
Q ss_pred ccccccEEEEe
Q 042766 370 NLSLKMIELSV 380 (914)
Q Consensus 370 ~~~~~L~~L~L 380 (914)
...++|+.|++
T Consensus 557 ~~lp~L~~L~l 567 (567)
T 1dce_A 557 EMLPSVSSILT 567 (567)
T ss_dssp HHCTTCSEEEC
T ss_pred HHCcccCccCC
Confidence 32346777754
No 360
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=7.7e-21 Score=195.08 Aligned_cols=159 Identities=18% Similarity=0.202 Sum_probs=133.9
Q ss_pred ceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccC
Q 042766 424 QQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSN 503 (914)
Q Consensus 424 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~ 503 (914)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..+..|..+++|+.|++++|+++
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~--------------------- 69 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS--------------------- 69 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCC---------------------
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCC---------------------
Confidence 56788888887 4565554 67888888888888766667777777766666555554
Q ss_pred CccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccC
Q 042766 504 NLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIP 583 (914)
Q Consensus 504 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 583 (914)
+..|..|.++++|++|+|++|+|+++++..|..+++|++|+|++|++++..|..|..+++|+.|+|++|+|++..+
T Consensus 70 ----~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 145 (220)
T 2v9t_B 70 ----ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAK 145 (220)
T ss_dssp ----EECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred ----CcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECH
Confidence 4557788889999999999999998877888999999999999999999999999999999999999999999888
Q ss_pred ccccccCCCCeEeCCCCccccccCCCC
Q 042766 584 EFLENLSFLEFLNLSYNYFEGEVPVKG 610 (914)
Q Consensus 584 ~~~~~l~~L~~L~ls~N~l~~~~p~~~ 610 (914)
..+..+++|+.|+|++|+|.|.++..+
T Consensus 146 ~~~~~l~~L~~L~L~~N~~~c~c~l~~ 172 (220)
T 2v9t_B 146 GTFSPLRAIQTMHLAQNPFICDCHLKW 172 (220)
T ss_dssp TTTTTCTTCCEEECCSSCEECSGGGHH
T ss_pred HHHhCCCCCCEEEeCCCCcCCCCccHH
Confidence 899999999999999999999887654
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=1.5e-20 Score=201.75 Aligned_cols=171 Identities=22% Similarity=0.363 Sum_probs=78.7
Q ss_pred CCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccccccccc
Q 042766 99 NLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRL 178 (914)
Q Consensus 99 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 178 (914)
.+++|++|++++|.++. +| .+..+++|++|+|++|++++..| ++.+++|++|+|++|++++ +| .
T Consensus 44 ~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~---------- 107 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-S---------- 107 (291)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-G----------
T ss_pred hcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-h----------
Confidence 34445555555555542 22 24444555555555555543222 4444444444444444442 11 2
Q ss_pred ccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCccc
Q 042766 179 SVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFS 258 (914)
Q Consensus 179 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 258 (914)
+..+++|++|+|++|++++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|+++
T Consensus 108 --------------l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~ 169 (291)
T 1h6t_A 108 --------------LKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS 169 (291)
T ss_dssp --------------GTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred --------------hccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccc
Confidence 44444444444444444432 2344444444444444444432 23444445555555555554
Q ss_pred CcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCc
Q 042766 259 GIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKG 308 (914)
Q Consensus 259 ~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 308 (914)
+..| +..+++|++|+|++|++++. | .+..+++|+.|++++|+++.
T Consensus 170 ~~~~---l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 170 DIVP---LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCGG---GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred cchh---hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 4322 33455555555555555532 2 25555555555555555554
No 362
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=4.6e-20 Score=189.26 Aligned_cols=151 Identities=22% Similarity=0.279 Sum_probs=84.2
Q ss_pred EEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCC-cccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCC
Q 042766 81 ELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIP-QEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNN 159 (914)
Q Consensus 81 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 159 (914)
.++++++.++. +|..+. ..+++|+|++|++++..| ..|.++++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 44555566543 454443 234666777776665544 33566666666666666666555555666666666666666
Q ss_pred cccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhccccccccccccc
Q 042766 160 KLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFS 234 (914)
Q Consensus 160 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 234 (914)
++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 666555555555555555555555555555555555555555555555555444444444444444444444444
No 363
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=6.9e-20 Score=187.97 Aligned_cols=146 Identities=20% Similarity=0.264 Sum_probs=91.5
Q ss_pred CCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCC
Q 042766 86 SQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQI 165 (914)
Q Consensus 86 ~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 165 (914)
+++++ .+|..+. +.|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|++++..
T Consensus 20 ~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~ 96 (220)
T 2v9t_B 20 GKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELP 96 (220)
T ss_dssp TSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCC
T ss_pred CCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccC
Confidence 34443 3454443 56777777777777666667777777777777777777666777777777777777777776444
Q ss_pred ChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhccccccccccccc
Q 042766 166 PKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFS 234 (914)
Q Consensus 166 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 234 (914)
+..|..+++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..|..+++|++|+|++|.+.
T Consensus 97 ~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 97 KSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred HhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 444566666666666666666555555655666666666555555554445555555555555555544
No 364
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=5.8e-20 Score=197.23 Aligned_cols=168 Identities=18% Similarity=0.298 Sum_probs=130.9
Q ss_pred CceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhcc
Q 042766 77 QRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCA 156 (914)
Q Consensus 77 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 156 (914)
.+++.|+++++.+... +.+..+++|++|+|++|++++..| ++++++|++|+|++|++++ +| .++.+++|++|+|
T Consensus 46 ~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEEC
Confidence 3588999999998654 458999999999999999996544 9999999999999999985 44 4999999999999
Q ss_pred CCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCC
Q 042766 157 SNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGM 236 (914)
Q Consensus 157 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 236 (914)
++|++++. +.+..+++|++|++++|++++. ..++.+++|++|++++|.+++..| +..+++|++|+|++|++++.
T Consensus 120 ~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l 193 (291)
T 1h6t_A 120 EHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 193 (291)
T ss_dssp TTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred CCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC
Confidence 99999853 5688888888888888888854 567777777777777777775544 66677777777777777643
Q ss_pred CCCccccccccceeeccCCccc
Q 042766 237 FPRSICNISSVELIFLTENRFS 258 (914)
Q Consensus 237 ~p~~~~~l~~L~~L~L~~N~l~ 258 (914)
| .+..+++|+.|++++|+++
T Consensus 194 -~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 194 -R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp -G-GGTTCTTCSEEEEEEEEEE
T ss_pred -h-hhccCCCCCEEECcCCccc
Confidence 2 2555555555555555554
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=3.1e-20 Score=206.12 Aligned_cols=181 Identities=22% Similarity=0.115 Sum_probs=149.4
Q ss_pred cEEEcccCcccccCChhhhcccCCceeeecccccccccCcccc-CCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCC
Q 042766 400 ITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLG-NLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASY 478 (914)
Q Consensus 400 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 478 (914)
+.+++++|+++. +|..+ .+.++.|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|.++++|+.|++++
T Consensus 21 ~~l~c~~~~l~~-iP~~~--~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSL--PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSC--CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccC--CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 578999999884 55443 24588899999999987777777 889999999999999877778888888887777776
Q ss_pred CccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccC
Q 042766 479 NKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVI 558 (914)
Q Consensus 479 N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 558 (914)
|+++ +..+..|.++++|+.|+|++|+|+++.|..|..+++|+.|+|++|+|++..
T Consensus 98 N~l~-------------------------~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 152 (361)
T 2xot_A 98 NHLH-------------------------TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFP 152 (361)
T ss_dssp SCCC-------------------------EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCC
T ss_pred CcCC-------------------------cCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeC
Confidence 6665 234556788899999999999999988999999999999999999999766
Q ss_pred Ccch---hccCCCCEEEccCCccccccCccccccCC--CCeEeCCCCccccccCC
Q 042766 559 PLSF---RFLKSIKALNVSSNNLSGKIPEFLENLSF--LEFLNLSYNYFEGEVPV 608 (914)
Q Consensus 559 p~~~---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~ls~N~l~~~~p~ 608 (914)
+..| ..+++|+.|||++|+|++..+..+..++. ++.|+|++|+|.|++..
T Consensus 153 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l 207 (361)
T 2xot_A 153 VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCKL 207 (361)
T ss_dssp GGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHHH
T ss_pred HHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcCc
Confidence 6666 67999999999999999877788888887 48899999999998764
No 366
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=5.3e-20 Score=204.20 Aligned_cols=126 Identities=17% Similarity=0.175 Sum_probs=67.5
Q ss_pred EecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccC-CCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCc
Q 042766 82 LNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIG-NLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNK 160 (914)
Q Consensus 82 l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 160 (914)
+++++++|+. +|..+. +.+++|+|++|+|++..+..+. ++++|++|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 23 l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~ 99 (361)
T 2xot_A 23 LSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNH 99 (361)
T ss_dssp EECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCc
Confidence 4455555543 444332 2356666666666655555555 66666666666666664444555555555555555555
Q ss_pred ccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCC
Q 042766 161 LEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLG 210 (914)
Q Consensus 161 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 210 (914)
+++..+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|+++
T Consensus 100 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 100 LHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC
Confidence 55444444555555555555555555444444444444444444444444
No 367
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1e-19 Score=213.96 Aligned_cols=195 Identities=26% Similarity=0.331 Sum_probs=116.7
Q ss_pred hhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCcccccccccc
Q 042766 219 LLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLEL 298 (914)
Q Consensus 219 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 298 (914)
.+..+..++++.+.+....+ +..+.+|+.|++++|.+... | .+..+++|+.|+|++|+|.+..| +..+++|+.
T Consensus 19 ~l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~ 91 (605)
T 1m9s_A 19 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGW 91 (605)
T ss_dssp HHHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCE
T ss_pred HHHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCE
Confidence 45667777777777765433 45666677777777766643 2 13456666666666666665433 666666666
Q ss_pred ccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEE
Q 042766 299 LDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIEL 378 (914)
Q Consensus 299 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L 378 (914)
|+|++|+|++.. .+..+++|+.|+|++|.+..+ ..+..+++|+.|+|++|+++
T Consensus 92 L~Ls~N~l~~l~--~l~~l~~L~~L~Ls~N~l~~l--------~~l~~l~~L~~L~Ls~N~l~----------------- 144 (605)
T 1m9s_A 92 LFLDENKIKDLS--SLKDLKKLKSLSLEHNGISDI--------NGLVHLPQLESLYLGNNKIT----------------- 144 (605)
T ss_dssp EECCSSCCCCCT--TSTTCTTCCEEECTTSCCCCC--------GGGGGCTTCSEEECCSSCCC-----------------
T ss_pred EECcCCCCCCCh--hhccCCCCCEEEecCCCCCCC--------ccccCCCccCEEECCCCccC-----------------
Confidence 666666665432 455555555555555555442 12344455555555555444
Q ss_pred EeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCC
Q 042766 379 SVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQ 458 (914)
Q Consensus 379 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 458 (914)
+. ..+..+++|+.|+|++|++++..| +..+++|+.|+|++|.|++. ..+..+++|+.|+|++|++.
T Consensus 145 --------~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 145 --------DI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp --------CC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEE
T ss_pred --------Cc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCc
Confidence 22 345566677777777777766555 66677777777777777653 24666777777777777776
Q ss_pred CCC
Q 042766 459 GNI 461 (914)
Q Consensus 459 ~~~ 461 (914)
+..
T Consensus 211 ~~p 213 (605)
T 1m9s_A 211 NKP 213 (605)
T ss_dssp CCC
T ss_pred CCc
Confidence 543
No 368
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=3.8e-19 Score=183.71 Aligned_cols=154 Identities=19% Similarity=0.218 Sum_probs=130.4
Q ss_pred CEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccc
Q 042766 104 RYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDIN 183 (914)
Q Consensus 104 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 183 (914)
+.++.++++++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 46788888888 7887665 78999999999999888889999999999999999998665667888999999999999
Q ss_pred cccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcc
Q 042766 184 YLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIF 261 (914)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 261 (914)
++++..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+....
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 999777777888999999999999988 77888888888888888888888777777888888888888888776543
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=4.4e-20 Score=222.71 Aligned_cols=192 Identities=19% Similarity=0.174 Sum_probs=113.4
Q ss_pred CCCCEEEcCCCCCcccCCcccCCCCCCCe-----eecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccc
Q 042766 101 SFLRYINLADNGFRGDIPQEIGNLFRLEK-----LALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKL 175 (914)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~-----L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 175 (914)
+.++.|+|.+|.+.. +|..+.....|.. ++++.|.+. ..|..+..+++|+.|+|++|++. .+|..+..+++|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 567899999999985 4444322222222 233334444 45777888888999999999888 788888888889
Q ss_pred cccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCC
Q 042766 176 QRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTEN 255 (914)
Q Consensus 176 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 255 (914)
++|+|++|.|+ .+|..|++|++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+ .+|..|+++++|++|+|++|
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGN 326 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTS
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCC
Confidence 99999999888 88888888889999999999888 77888888888999999988887 66777888888888888888
Q ss_pred cccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCc
Q 042766 256 RFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSN 304 (914)
Q Consensus 256 ~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 304 (914)
.|++.+|..+......+..|+|++|.+++.+|.. |+.|++++|
T Consensus 327 ~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 327 PLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred ccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 8888777554322223345778888888777763 456667766
No 370
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=3.2e-19 Score=187.71 Aligned_cols=138 Identities=20% Similarity=0.168 Sum_probs=107.1
Q ss_pred cccccCcccCCccEEEEEEEECCCcEE--EEEEEeeccCCc------------------------chHHHHHHHHHHHhc
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMV--VAVKVINLKQKG------------------------ASKSFVSECEALRNI 759 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l 759 (914)
-|++.+.||+|+||.||+|++..+|+. ||||+++..... ....+.+|+++++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367788999999999999999667888 999997533111 013688999999999
Q ss_pred CCCCc--ceEEeEeecCCCCCCceEeEEEecccC-C----CHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHH-h
Q 042766 760 RHRNL--IKIITICSSTDFEGVDFKALVFEYMEN-G----SLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLH-H 831 (914)
Q Consensus 760 ~h~ni--v~l~~~~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH-~ 831 (914)
.|+++ +..+++ ...++||||+.+ | +|.++... .++.++..++.|++.|+.||| +
T Consensus 128 ~~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~---------~~~~~~~~i~~qi~~~l~~lH~~ 189 (258)
T 1zth_A 128 KEAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE---------LKELDVEGIFNDVVENVKRLYQE 189 (258)
T ss_dssp HHTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG---------GGGSCHHHHHHHHHHHHHHHHHT
T ss_pred HhCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc---------cChHHHHHHHHHHHHHHHHHHHH
Confidence 88864 344432 235799999942 3 77776432 123356789999999999999 8
Q ss_pred CCCCCcEecCCCCCCeeecCCCcEEEecccccccc
Q 042766 832 HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFL 866 (914)
Q Consensus 832 ~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~ 866 (914)
. +|+||||||+|||++. .++|+|||+|...
T Consensus 190 ~---givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 190 A---ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp S---CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred C---CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 8 9999999999999988 9999999999754
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.77 E-value=2.1e-19 Score=180.22 Aligned_cols=136 Identities=27% Similarity=0.332 Sum_probs=112.2
Q ss_pred hhhcccCCccCCCccc-cccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccC
Q 042766 497 LVLDLSNNLLNGSLPL-QVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSS 575 (914)
Q Consensus 497 ~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 575 (914)
++|++++|++++..+. .|+.+++|++|+|++|+|++.+|..|.++++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 32 ~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 111 (192)
T 1w8a_A 32 TELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYD 111 (192)
T ss_dssp SEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCS
T ss_pred CEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCC
Confidence 4566666666655553 488899999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCccccccCCCCeEeCCCCccccccCCCCcCCCCCccCccCCCCCCCCccC
Q 042766 576 NNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVKGVFSNKTKISLHGNVKLCGGIDE 632 (914)
Q Consensus 576 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~ 632 (914)
|+|++.+|..+..+++|++|+|++|+|+|.++..+....+....+.++...|+.++.
T Consensus 112 N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~~ 168 (192)
T 1w8a_A 112 NQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSK 168 (192)
T ss_dssp SCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSSTT
T ss_pred CcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCChH
Confidence 999999999999999999999999999999986543332333345566667766443
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=3e-19 Score=188.55 Aligned_cols=163 Identities=24% Similarity=0.319 Sum_probs=86.8
Q ss_pred EEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCc
Q 042766 81 ELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNK 160 (914)
Q Consensus 81 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 160 (914)
.++++++.+.... .+..+++|++|++++|+++ .+| .++.+++|++|+|++|++++..| ++.+++|++|+|++|+
T Consensus 23 ~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~ 96 (263)
T 1xeu_A 23 KQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNR 96 (263)
T ss_dssp HHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSC
T ss_pred HHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCc
Confidence 3444555444322 3455566666666666665 344 45566666666666666653322 5566666666666666
Q ss_pred ccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCc
Q 042766 161 LEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRS 240 (914)
Q Consensus 161 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 240 (914)
+++ +|... . ++|++|+|++|++++ +| .++.+++|++|+|++|++++. | .++.+++|++|+|++|++++. ..
T Consensus 97 l~~-l~~~~-~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~ 167 (263)
T 1xeu_A 97 LKN-LNGIP-S-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GG 167 (263)
T ss_dssp CSC-CTTCC-C-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TT
T ss_pred cCC-cCccc-c-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HH
Confidence 653 33222 2 556666666665553 22 355555555555555555533 2 455555555555555555543 34
Q ss_pred cccccccceeeccCCccc
Q 042766 241 ICNISSVELIFLTENRFS 258 (914)
Q Consensus 241 ~~~l~~L~~L~L~~N~l~ 258 (914)
+..+++|+.|++++|.++
T Consensus 168 l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 168 LTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp STTCCCCCEEEEEEEEEE
T ss_pred hccCCCCCEEeCCCCccc
Confidence 555555555555555554
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=2.1e-19 Score=189.76 Aligned_cols=151 Identities=18% Similarity=0.344 Sum_probs=62.9
Q ss_pred ccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhccc
Q 042766 145 LSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLV 224 (914)
Q Consensus 145 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 224 (914)
+..+++|++|++++|+++ .+| .+..+++|++|+|++|++++..| +.++++|++|+|++|++++ +|.... ++|+
T Consensus 37 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~ 109 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIPS--ACLS 109 (263)
T ss_dssp HHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCCC--SSCC
T ss_pred hhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcccc--Cccc
Confidence 333344444444444333 222 33334444444444444442222 3444444444444444432 111111 4444
Q ss_pred ccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCc
Q 042766 225 NLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSN 304 (914)
Q Consensus 225 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 304 (914)
+|+|++|++++. ..+..+++|+.|+|++|++++. | .+..+++|++|+|++|++++. ..+..+++|+.|++++|
T Consensus 110 ~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~--~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N 182 (263)
T 1xeu_A 110 RLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V--MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQ 182 (263)
T ss_dssp EEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G--GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEE
T ss_pred EEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h--HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCC
Confidence 444444444432 1244444444444444444432 1 233445555555555555433 34445555555555555
Q ss_pred cCCcc
Q 042766 305 QFKGK 309 (914)
Q Consensus 305 ~l~~~ 309 (914)
++++.
T Consensus 183 ~~~~~ 187 (263)
T 1xeu_A 183 KCVNE 187 (263)
T ss_dssp EEECC
T ss_pred cccCC
Confidence 55433
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=4.1e-19 Score=178.98 Aligned_cols=105 Identities=18% Similarity=0.249 Sum_probs=45.3
Q ss_pred CCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccc
Q 042766 100 LSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLS 179 (914)
Q Consensus 100 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 179 (914)
+++|++|++++|.++ .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|++++..|..++.+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 344444445444444 333 3444444555555444332 112344444444444444444433344444444444444
Q ss_pred cccccccCcCCcccccccccceeecccCC
Q 042766 180 VDINYLTGQLPDSVGNLSAIEVIRITENS 208 (914)
Q Consensus 180 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 208 (914)
|++|++++..|..++.+++|++|++++|.
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 44444443333344444444444444443
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=1.1e-18 Score=175.96 Aligned_cols=154 Identities=18% Similarity=0.232 Sum_probs=84.0
Q ss_pred CCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccce
Q 042766 122 GNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEV 201 (914)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 201 (914)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45566666777666666 455 4666666666666666443 2235555556666666666655555555555555555
Q ss_pred eecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCcc
Q 042766 202 IRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNN 281 (914)
Q Consensus 202 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~ 281 (914)
|++++|.+++..|..++.+++|++|++++|++ ++. +| .+..+++|++|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~-----------------------i~~-~~--~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGA-----------------------ITD-IM--PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTB-----------------------CCC-CG--GGGGCSSCCEEECTTBC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCC-----------------------ccc-cH--hhcCCCCCCEEECCCCC
Confidence 55555555544445555555555555555541 322 22 23355556666666665
Q ss_pred CCCCCCCccccccccccccccCccCC
Q 042766 282 FVGSIPDSLSNASNLELLDLPSNQFK 307 (914)
Q Consensus 282 l~~~~p~~~~~l~~L~~L~Ls~N~l~ 307 (914)
+++ ++ .+..+++|++|++++|+|.
T Consensus 171 i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 171 VHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCC-CT-TGGGCSSCCEEEECBC---
T ss_pred CcC-hH-HhccCCCCCEEEeeCcccC
Confidence 553 22 5556666666666666654
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=2.3e-18 Score=188.45 Aligned_cols=101 Identities=12% Similarity=0.034 Sum_probs=74.6
Q ss_pred cccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCc-eeeecccccccccCccccCCCCCCeEE
Q 042766 373 LKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQ-QLSVFNNFLRGGIPSGLGNLTKLGSLD 451 (914)
Q Consensus 373 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~ 451 (914)
.+|+.+++++|+++.+.+.+|.++.+|+.++|.+| ++.+.+.+|.++++|+ .+++.+ .++.+.+.+|.++++|+.++
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 36777777777777777777777777777777776 6666677777777777 777777 66656667777777777777
Q ss_pred eeCCcCCCCCCCccCCCCCccccc
Q 042766 452 LGSNSLQGNIPSSLGNCQNLILFI 475 (914)
Q Consensus 452 Ls~N~l~~~~p~~~~~l~~L~~L~ 475 (914)
+++|+++...+.+|.++++|+.++
T Consensus 304 l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 304 ATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp ECSSCCCEECTTTTCTTCCCCEEE
T ss_pred eCCCccCccchhhhcCCcchhhhc
Confidence 777777766666777777777664
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=3.6e-18 Score=171.13 Aligned_cols=129 Identities=20% Similarity=0.350 Sum_probs=81.7
Q ss_pred CEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCC-CccccCCcchhccCCCcccCCCChhcccccccccccccc
Q 042766 104 RYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPT-NLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDI 182 (914)
Q Consensus 104 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 182 (914)
+++++++|+++ .+|..+.. +|++|+|++|++++..|. .++.+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67788888875 67766544 777777777777744443 366677777777777777666666666666666666666
Q ss_pred ccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccC
Q 042766 183 NYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSG 235 (914)
Q Consensus 183 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 235 (914)
|++++..|..|.++++|++|+|++|++++..|..|+.+++|++|+|++|.+++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 66665555555556666666665555555555555555555555555555543
No 378
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=9.4e-18 Score=168.07 Aligned_cols=113 Identities=26% Similarity=0.318 Sum_probs=99.1
Q ss_pred hhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCC
Q 042766 497 LVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSN 576 (914)
Q Consensus 497 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 576 (914)
++|++++|.|+ .+|..|.++++|+.|+|++|+|+++.+.+|.++++|++|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 34 ~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N 112 (193)
T 2wfh_A 34 TELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGN 112 (193)
T ss_dssp CEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCC
Confidence 44555566655 56677888899999999999999988889999999999999999999999999999999999999999
Q ss_pred ccccccCccccccCCCCeEeCCCCccccccCCCC
Q 042766 577 NLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVKG 610 (914)
Q Consensus 577 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 610 (914)
+|++..+..|..+++|+.|+|++|+|.|.+...+
T Consensus 113 ~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~ 146 (193)
T 2wfh_A 113 DISVVPEGAFNDLSALSHLAIGANPLYCDCNMQW 146 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHH
T ss_pred CCCeeChhhhhcCccccEEEeCCCCeecCCcCHH
Confidence 9998777789999999999999999999887553
No 379
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=8.1e-18 Score=184.13 Aligned_cols=287 Identities=10% Similarity=0.057 Sum_probs=175.3
Q ss_pred cCCcchhccCCCcccCCCChhccc-ccccccccccccccc--CcCCcccccccccceeecccCCCCCCCCccchh-----
Q 042766 148 CSNLIHFCASNNKLEGQIPKEIGN-LLKLQRLSVDINYLT--GQLPDSVGNLSAIEVIRITENSLGGKIPTTLGL----- 219 (914)
Q Consensus 148 l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~----- 219 (914)
+.+++.|.++++ +.+.--..+.. +++|++|||++|+++ ...+..+ +.+..+.+..|.+ .+.+|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhccccccc
Confidence 566777777643 21111112333 566777777777776 2222222 2234444444422 2344555
Q ss_pred ---hhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccCcccceeeccCcc----CCCCCCCcccc
Q 042766 220 ---LRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNN----FVGSIPDSLSN 292 (914)
Q Consensus 220 ---l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~----l~~~~p~~~~~ 292 (914)
+++|+.|+|.+ .++.+.+.+|.++++|+.+++++|.++ .++...|.++.++..+.+..+. .....+.+|.+
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~-~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~ 174 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP-NLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIE 174 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC-EECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEE
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc-ccchhhhcCCCceEEecCcchhhhhcccccccccccc
Confidence 67777777776 666555666777777777777777665 3444555566666655555422 12223344545
Q ss_pred ccccc-cccccCccC-CccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhc
Q 042766 293 ASNLE-LLDLPSNQF-KGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIAN 370 (914)
Q Consensus 293 l~~L~-~L~Ls~N~l-~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 370 (914)
+.+|+ .+++....- .......-....++..+.+.++-. .. ++......+++|+.|+|++|+++ .+|...+.
T Consensus 175 ~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~-~~-----~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~ 247 (329)
T 3sb4_A 175 GEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLD-NA-----DFKLIRDYMPNLVSLDISKTNAT-TIPDFTFA 247 (329)
T ss_dssp SCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCC-HH-----HHHHHHHHCTTCCEEECTTBCCC-EECTTTTT
T ss_pred ccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeec-HH-----HHHHHHHhcCCCeEEECCCCCcc-eecHhhhh
Confidence 55554 333332210 000000111234444555544311 10 01111234789999999999998 56655444
Q ss_pred cccccEEEEeecccccccCCccccCCCCCc-EEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCe
Q 042766 371 LSLKMIELSVGRNQISGTIPPGIRNLVNLI-TFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGS 449 (914)
Q Consensus 371 ~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 449 (914)
...+|+.+++.+| ++.+.+.+|.++.+|+ .+++.+ +++.+.+.+|.++++|+.|++++|.++...+.+|.++++|+.
T Consensus 248 ~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ 325 (329)
T 3sb4_A 248 QKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKL 325 (329)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCE
T ss_pred CCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhh
Confidence 4447999999998 8888889999999999 999998 888788899999999999999999999888889999999999
Q ss_pred EEe
Q 042766 450 LDL 452 (914)
Q Consensus 450 L~L 452 (914)
++.
T Consensus 326 ly~ 328 (329)
T 3sb4_A 326 IYK 328 (329)
T ss_dssp EEC
T ss_pred hcc
Confidence 873
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=2.7e-17 Score=161.02 Aligned_cols=133 Identities=19% Similarity=0.211 Sum_probs=87.6
Q ss_pred CCCCCEEEcCCCCCc-ccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccccccccc
Q 042766 100 LSFLRYINLADNGFR-GDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRL 178 (914)
Q Consensus 100 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 178 (914)
.++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 356777777777776 66777677777777777777777643 566677777777777777776566666667777777
Q ss_pred ccccccccCcC-CcccccccccceeecccCCCCCCCC---ccchhhhccccccccccccc
Q 042766 179 SVDINYLTGQL-PDSVGNLSAIEVIRITENSLGGKIP---TTLGLLRRLVNLNVAENQFS 234 (914)
Q Consensus 179 ~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 234 (914)
+|++|++++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777776432 2556666666666666666664433 35556666666666666655
No 381
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=2.8e-17 Score=157.34 Aligned_cols=128 Identities=16% Similarity=0.187 Sum_probs=98.3
Q ss_pred CCCCCEEEcCCCCCc-ccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccccccccc
Q 042766 100 LSFLRYINLADNGFR-GDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRL 178 (914)
Q Consensus 100 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 178 (914)
.++|++|++++|.++ +.+|..++.+++|++|+|++|.+++. ..++.+++|++|+|++|++++.+|..++.+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 367888888888887 77888888888888888888888754 677888888888888888887677777778888888
Q ss_pred ccccccccCc-CCcccccccccceeecccCCCCCCCC---ccchhhhcccccccc
Q 042766 179 SVDINYLTGQ-LPDSVGNLSAIEVIRITENSLGGKIP---TTLGLLRRLVNLNVA 229 (914)
Q Consensus 179 ~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls 229 (914)
++++|++++. .|..++.+++|++|++++|.+++..+ ..++.+++|++|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 8888888753 34667777777777777777775554 466777777777765
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=8.9e-17 Score=157.32 Aligned_cols=83 Identities=20% Similarity=0.272 Sum_probs=33.1
Q ss_pred CCcchhccCCCccc-CCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccc
Q 042766 149 SNLIHFCASNNKLE-GQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLN 227 (914)
Q Consensus 149 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 227 (914)
++|++|++++|+++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..++.+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 33444444444443 33344444444444444444444322 3333344444444444444333333333333333333
Q ss_pred cccccc
Q 042766 228 VAENQF 233 (914)
Q Consensus 228 Ls~N~l 233 (914)
|++|++
T Consensus 102 Ls~N~l 107 (168)
T 2ell_A 102 LSGNKL 107 (168)
T ss_dssp CBSSSC
T ss_pred ccCCcc
Confidence 333333
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=1.8e-16 Score=158.66 Aligned_cols=108 Identities=27% Similarity=0.324 Sum_probs=52.0
Q ss_pred CCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccccccccccc
Q 042766 101 SFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSV 180 (914)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 180 (914)
+.|++|+|++|.++ .+|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 34555555555555 44555555555555555555555444444555555555555555554444444444444444444
Q ss_pred ccccccCcCCcccccccccceeecccCCC
Q 042766 181 DINYLTGQLPDSVGNLSAIEVIRITENSL 209 (914)
Q Consensus 181 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 209 (914)
++|++++..+..|..+++|+.|+|++|.+
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 44444433333344444444444444443
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=4.9e-17 Score=155.66 Aligned_cols=128 Identities=15% Similarity=0.161 Sum_probs=86.1
Q ss_pred CCCCCeeecCCCCCC-CcCCCCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCccccccccccee
Q 042766 124 LFRLEKLALSNNSFS-GTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVI 202 (914)
Q Consensus 124 l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 202 (914)
.++|++|++++|.++ +.+|..+..+++|++|++++|++++. ..++.+++|++|+|++|.+++.+|..++.+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 357888888888887 77787778888888888888888754 667777777777777777776666666667777777
Q ss_pred ecccCCCCCC-CCccchhhhcccccccccccccCCCC---Cccccccccceeecc
Q 042766 203 RITENSLGGK-IPTTLGLLRRLVNLNVAENQFSGMFP---RSICNISSVELIFLT 253 (914)
Q Consensus 203 ~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~ 253 (914)
++++|.+++. .|..++.+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 7777776642 23556666666666666666664433 244444555544443
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=3.4e-16 Score=154.55 Aligned_cols=112 Identities=21% Similarity=0.227 Sum_probs=98.9
Q ss_pred hhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCC
Q 042766 497 LVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSN 576 (914)
Q Consensus 497 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 576 (914)
+.|++++|++++..+..|..+++|++|+|++|++++.++..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 31 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 110 (177)
T 2o6r_A 31 TRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTN 110 (177)
T ss_dssp SEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCC
Confidence 45666666666666667788999999999999999888888899999999999999999888888999999999999999
Q ss_pred ccccccCccccccCCCCeEeCCCCccccccCC
Q 042766 577 NLSGKIPEFLENLSFLEFLNLSYNYFEGEVPV 608 (914)
Q Consensus 577 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 608 (914)
++++..+..+..+++|++|++++|+++|.+|.
T Consensus 111 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 111 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 99987777789999999999999999998873
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=6e-16 Score=152.79 Aligned_cols=136 Identities=19% Similarity=0.232 Sum_probs=96.8
Q ss_pred CCCCccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCC
Q 042766 63 NFCQWTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIP 142 (914)
Q Consensus 63 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 142 (914)
..|.|.+|.|+. ++++ .+|..+ .+.|++|++++|++++..+..++++++|++|+|++|++++..+
T Consensus 5 C~C~~~~l~~~~------------~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (177)
T 2o6r_A 5 CSCSGTEIRCNS------------KGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPD 69 (177)
T ss_dssp CEEETTEEECCS------------SCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CEeCCCEEEecC------------CCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeCh
Confidence 447888888853 2332 234333 3678888888888886666667888888888888888885555
Q ss_pred CCccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccccceeecccCCCCCCC
Q 042766 143 TNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKI 213 (914)
Q Consensus 143 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 213 (914)
..++.+++|++|+|++|++++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|.+.+..
T Consensus 70 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 70 GVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred hHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 56778888888888888887666666777777777777777777555555667777777777777776543
No 387
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=3.3e-16 Score=170.52 Aligned_cols=136 Identities=14% Similarity=0.177 Sum_probs=98.6
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCC--------------cchH--------HHHHHHHHHHhcCCC
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK--------------GASK--------SFVSECEALRNIRHR 762 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------------~~~~--------~~~~E~~~l~~l~h~ 762 (914)
.=|++.+.||+|++|.||+|++. +|+.||||+++.... .... ...+|...+.++.+.
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~ 173 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE 173 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc
Confidence 34889999999999999999986 688999999853210 0011 123566666666544
Q ss_pred Ccc--eEEeEeecCCCCCCceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEec
Q 042766 763 NLI--KIITICSSTDFEGVDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHG 840 (914)
Q Consensus 763 niv--~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHr 840 (914)
++. ..+++ ...++||||++|+++.++... .....++.|++.++.|||++ +||||
T Consensus 174 gv~vp~p~~~---------~~~~LVME~i~G~~L~~l~~~------------~~~~~l~~qll~~l~~lH~~---gIVHr 229 (397)
T 4gyi_A 174 GFPVPEPIAQ---------SRHTIVMSLVDALPMRQVSSV------------PDPASLYADLIALILRLAKH---GLIHG 229 (397)
T ss_dssp TCSCCCEEEE---------ETTEEEEECCSCEEGGGCCCC------------SCHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred CCCCCeeeec---------cCceEEEEecCCccHhhhccc------------HHHHHHHHHHHHHHHHHHHC---CCcCC
Confidence 432 22221 123699999999888654321 12356789999999999999 99999
Q ss_pred CCCCCCeeecCCC----------cEEEeccccccc
Q 042766 841 DLKPSNVLLDYDM----------VAHVGDFGLAKF 865 (914)
Q Consensus 841 Dlkp~NILl~~~~----------~~ki~DFGla~~ 865 (914)
||||.|||+++++ .+.|+||+-+-.
T Consensus 230 DLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 230 DFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence 9999999998876 389999997754
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.61 E-value=5.5e-15 Score=165.16 Aligned_cols=253 Identities=10% Similarity=0.119 Sum_probs=150.4
Q ss_pred CcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeeccCCcccCcccccccccC
Q 042766 190 PDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLTENRFSGIFPFDILLNL 269 (914)
Q Consensus 190 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l 269 (914)
+.+|.++ +|+.+.+.+| ++..-..+|.+ .+|+.+.+.+ .++.+.+.+|.++.+|+.+++++|+++. +|...|. .
T Consensus 129 ~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~-I~~~aF~-~ 202 (401)
T 4fdw_A 129 KDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITK-LPASTFV-Y 202 (401)
T ss_dssp TTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSE-ECTTTTT-T
T ss_pred HhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceE-echhhEe-e
Confidence 3445443 4555555544 44344445555 3455555553 4444445555566666666666555552 3444443 3
Q ss_pred cccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCC
Q 042766 270 PNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSS 349 (914)
Q Consensus 270 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~ 349 (914)
.+|+.+.|..+ ++.+-..+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+ .|.++.++.. .|.++++
T Consensus 203 ~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~------aF~~c~~ 272 (401)
T 4fdw_A 203 AGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASR------AFYYCPE 272 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTT------TTTTCTT
T ss_pred cccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChh------HhhCCCC
Confidence 55666665533 44444555556666666666543 44455555555 55555555 2334433222 3445555
Q ss_pred CcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeec
Q 042766 350 LKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVF 429 (914)
Q Consensus 350 L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 429 (914)
|+.+++.+|.+. .+.+..+.+.+|.+|.+|+.++|. |.++.+...+|.++++|+.++|.
T Consensus 273 L~~l~l~~~~~~--------------------~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp 331 (401)
T 4fdw_A 273 LAEVTTYGSTFN--------------------DDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIP 331 (401)
T ss_dssp CCEEEEESSCCC--------------------CCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEEC
T ss_pred CCEEEeCCcccc--------------------CCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEEC
Confidence 555555555433 011123556788888889999888 45777777888888889999886
Q ss_pred ccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCC-CccccccCCCcc
Q 042766 430 NNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQ-NLILFIASYNKL 481 (914)
Q Consensus 430 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~l~~N~l 481 (914)
+| ++.+-+.+|.++ +|+.+++++|.+....+..|.+++ ++..+++..+.+
T Consensus 332 ~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 332 AN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp TT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred cc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 55 665667788888 899999998888766677777774 566666655543
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.61 E-value=1.7e-17 Score=167.25 Aligned_cols=111 Identities=18% Similarity=0.342 Sum_probs=48.0
Q ss_pred hccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCcccccccc
Q 042766 168 EIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSV 247 (914)
Q Consensus 168 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 247 (914)
.++.+++|++|+|++|++++ +| .+.++++|++|++++|.++ .+|..+..+++|++|+|++|++++ +| .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 44444444444444444443 33 4444444444444444444 344444444444444444444443 22 34444444
Q ss_pred ceeeccCCcccCcccccccccCcccceeeccCccCC
Q 042766 248 ELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFV 283 (914)
Q Consensus 248 ~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 283 (914)
++|++++|++++..+...+..+++|++|++++|.+.
T Consensus 118 ~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHH
T ss_pred CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccc
Confidence 444444444443211122234444444444444443
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.60 E-value=1.2e-17 Score=168.36 Aligned_cols=154 Identities=21% Similarity=0.297 Sum_probs=97.7
Q ss_pred CCCCCCeeecCCCCCCCcCCC------CccccCCcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccc
Q 042766 123 NLFRLEKLALSNNSFSGTIPT------NLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNL 196 (914)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~------~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 196 (914)
....++.++++.+.++|.+|. .++.+++|++|+|++|++++ +| .+..+++|++|+|++|.++ .+|..+..+
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~ 92 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVA 92 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHH
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcC
Confidence 344555555555555555554 56666666666666666664 55 6666667777777777766 566666666
Q ss_pred cccceeecccCCCCCCCCccchhhhcccccccccccccCCCC-CccccccccceeeccCCcccCcccc---------ccc
Q 042766 197 SAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFP-RSICNISSVELIFLTENRFSGIFPF---------DIL 266 (914)
Q Consensus 197 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~---------~~~ 266 (914)
++|++|+|++|++++ +| .++.+++|++|++++|++++..+ ..+..+++|++|++++|.+++..|. ..+
T Consensus 93 ~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 170 (198)
T 1ds9_A 93 DTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVV 170 (198)
T ss_dssp HHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHH
T ss_pred CcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHH
Confidence 777777777777764 34 56777777777777777774332 4677777788888888877665443 234
Q ss_pred ccCcccceeeccCccCC
Q 042766 267 LNLPNLKKLGIGGNNFV 283 (914)
Q Consensus 267 ~~l~~L~~L~Ls~N~l~ 283 (914)
..+++|++|| +|.++
T Consensus 171 ~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 171 KRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHCSSCSEEC--CGGGT
T ss_pred HhCCCcEEEC--CcccC
Confidence 4566666654 44443
No 391
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.60 E-value=1e-14 Score=162.91 Aligned_cols=256 Identities=13% Similarity=0.109 Sum_probs=144.9
Q ss_pred CCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCc
Q 042766 285 SIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGEL 364 (914)
Q Consensus 285 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 364 (914)
+-+.+|.+. +|+.++|..| ++.+...+|.+ .+|+.+.+.. .++.++.. .|.+|++|+.++|++|+++ .+
T Consensus 127 I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~------aF~~c~~L~~l~l~~n~l~-~I 195 (401)
T 4fdw_A 127 IPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKED------IFYYCYNLKKADLSKTKIT-KL 195 (401)
T ss_dssp ECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSS------TTTTCTTCCEEECTTSCCS-EE
T ss_pred ehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHH------HhhCcccCCeeecCCCcce-Ee
Confidence 334445543 4555665544 55555555555 3466666653 44443222 3556666666666666665 33
Q ss_pred CchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCC
Q 042766 365 PHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNL 444 (914)
Q Consensus 365 p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 444 (914)
|...+.. .+|+.+.+.. .++.+...+|.++.+|+.+++..| ++.+...+|.+ .+|+.+.+ .|.++...+.+|.++
T Consensus 196 ~~~aF~~-~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c 270 (401)
T 4fdw_A 196 PASTFVY-AGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYC 270 (401)
T ss_dssp CTTTTTT-CCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTC
T ss_pred chhhEee-cccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCC
Confidence 3332222 2344555542 244445556666666666666543 34344444544 45555555 233333334445555
Q ss_pred CCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeec
Q 042766 445 TKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLD 524 (914)
Q Consensus 445 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 524 (914)
++|+.+++.+|.+. . +.+..+.+.+|.++++|+.++
T Consensus 271 ~~L~~l~l~~~~~~------------------------~--------------------~~~~~I~~~aF~~c~~L~~l~ 306 (401)
T 4fdw_A 271 PELAEVTTYGSTFN------------------------D--------------------DPEAMIHPYCLEGCPKLARFE 306 (401)
T ss_dssp TTCCEEEEESSCCC------------------------C--------------------CTTCEECTTTTTTCTTCCEEC
T ss_pred CCCCEEEeCCcccc------------------------C--------------------CcccEECHHHhhCCccCCeEE
Confidence 55555555444432 0 011113345677777788888
Q ss_pred ccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccccccCccccccC-CCCeEeCCCCccc
Q 042766 525 ISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLS-FLEFLNLSYNYFE 603 (914)
Q Consensus 525 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~ 603 (914)
|. |.++.+...+|.+|++|+.++|..| ++...+.+|.++ +|+.+++++|.+....+..|.+++ .++.|++..|.+.
T Consensus 307 l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 307 IP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred eC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 87 4476666777888888888888554 666667788887 888888888887776677777774 6777777776544
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=1.6e-15 Score=149.49 Aligned_cols=132 Identities=16% Similarity=0.171 Sum_probs=81.9
Q ss_pred CCCCCCCCEEEcCCCCCcccCCcccCCCC-CCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccccc
Q 042766 97 VGNLSFLRYINLADNGFRGDIPQEIGNLF-RLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLLKL 175 (914)
Q Consensus 97 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 175 (914)
+.+++.|++|++++|+++ .+|. +..+. +|++|+|++|++++. ..++.+++|++|+|++|++++..|..++.+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 455667777777777777 4443 44444 777777777777743 566677777777777777764433444666677
Q ss_pred cccccccccccCcCCc--ccccccccceeecccCCCCCCCCcc----chhhhccccccccccccc
Q 042766 176 QRLSVDINYLTGQLPD--SVGNLSAIEVIRITENSLGGKIPTT----LGLLRRLVNLNVAENQFS 234 (914)
Q Consensus 176 ~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~ 234 (914)
++|+|++|+++ .+|. .++.+++|++|++++|.++ .+|.. ++.+++|++||+++|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 77777777665 4444 5666666666666666665 33442 555555666665555543
No 393
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.56 E-value=9e-14 Score=155.94 Aligned_cols=326 Identities=10% Similarity=0.071 Sum_probs=152.2
Q ss_pred hccccccccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCcccccccc
Q 042766 168 EIGNLLKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSV 247 (914)
Q Consensus 168 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 247 (914)
+|.++.+|+.+.|..+ ++..-..+|.++++|+.+++.++ ++..-..+|.++.+|+.+.+..+ +......+|.+...+
T Consensus 66 AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~ 142 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFK 142 (394)
T ss_dssp TTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCS
T ss_pred HhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccccc
Confidence 3334444444444322 33222334444444554444432 33233344555555555444432 222333444444333
Q ss_pred ceeeccCCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccC
Q 042766 248 ELIFLTENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQ 327 (914)
Q Consensus 248 ~~L~L~~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 327 (914)
+........ .+....|.++++|+.+.+..+. .......|.++++|+.+++..| ++.+...+|.++..|+.+.+..
T Consensus 143 ~~~~~~~~~---~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~ 217 (394)
T 4fs7_A 143 EITIPEGVT---VIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPN 217 (394)
T ss_dssp EEECCTTCC---EECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCT
T ss_pred ccccCcccc---ccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCC
Confidence 222222211 1223444555556666555432 2233445556666666666554 4444455555555555555443
Q ss_pred CcCCCCCCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccC
Q 042766 328 NNLGTGTANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVN 407 (914)
Q Consensus 328 N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 407 (914)
+..... .......+ ++.+.+.. .++.+...+|.++.+|+.+.+..+
T Consensus 218 ~~~~i~--------~~~~~~~~-------------------------l~~i~ip~-~~~~i~~~~f~~~~~l~~~~~~~~ 263 (394)
T 4fs7_A 218 SLYYLG--------DFALSKTG-------------------------VKNIIIPD-SFTELGKSVFYGCTDLESISIQNN 263 (394)
T ss_dssp TCCEEC--------TTTTTTCC-------------------------CCEEEECT-TCCEECSSTTTTCSSCCEEEECCT
T ss_pred CceEee--------hhhcccCC-------------------------CceEEECC-CceecccccccccccceeEEcCCC
Confidence 322110 00111223 33333322 122234456666777777777665
Q ss_pred cccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCch
Q 042766 408 QFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQ 487 (914)
Q Consensus 408 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 487 (914)
... +....|..+..++.+....+.+. ...|..+.+|+.+.+.++ ++..-..+|.+|++|+.+++..+ ++
T Consensus 264 ~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~----- 332 (394)
T 4fs7_A 264 KLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE----- 332 (394)
T ss_dssp TCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-----
T ss_pred cce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-----
Confidence 443 55556666666666666554332 234566666666666543 44344455656665555543211 11
Q ss_pred hhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCC
Q 042766 488 QLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKS 567 (914)
Q Consensus 488 ~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 567 (914)
.+-..+|.++++|+.+++..| ++.+...+|.+|++|+.+++..+ ++ .+..+|.+.++
T Consensus 333 --------------------~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~ 389 (394)
T 4fs7_A 333 --------------------EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTK 389 (394)
T ss_dssp --------------------EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCE
T ss_pred --------------------EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCC
Confidence 122345556666666666555 55455556666666666666544 21 22344554444
Q ss_pred CC
Q 042766 568 IK 569 (914)
Q Consensus 568 L~ 569 (914)
|+
T Consensus 390 L~ 391 (394)
T 4fs7_A 390 FK 391 (394)
T ss_dssp EE
T ss_pred Cc
Confidence 44
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.55 E-value=6.3e-15 Score=144.19 Aligned_cols=109 Identities=21% Similarity=0.230 Sum_probs=97.1
Q ss_pred hhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCC
Q 042766 497 LVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSN 576 (914)
Q Consensus 497 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 576 (914)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 46778888887 4665553 78999999999999999999999999999999999999888888999999999999999
Q ss_pred ccccccCccccccCCCCeEeCCCCccccccCC
Q 042766 577 NLSGKIPEFLENLSFLEFLNLSYNYFEGEVPV 608 (914)
Q Consensus 577 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 608 (914)
+|++..+..|..+++|+.|+|++|+|+|.++.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 99988888899999999999999999998873
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=2.3e-15 Score=148.45 Aligned_cols=133 Identities=19% Similarity=0.196 Sum_probs=86.7
Q ss_pred ccCCCCCCCeeecCCCCCCCcCCCCccccC-CcchhccCCCcccCCCChhccccccccccccccccccCcCCcccccccc
Q 042766 120 EIGNLFRLEKLALSNNSFSGTIPTNLSRCS-NLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLTGQLPDSVGNLSA 198 (914)
Q Consensus 120 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 198 (914)
.+.++.+|++|+|++|+++ .+|. +..+. +|++|+|++|++++. +.|+.+++|++|+|++|++++..|..++.+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4566778888888888887 4543 55444 788888888877753 56677777777777777777544444567777
Q ss_pred cceeecccCCCCCCCCc--cchhhhcccccccccccccCCCCCc----cccccccceeeccCCccc
Q 042766 199 IEVIRITENSLGGKIPT--TLGLLRRLVNLNVAENQFSGMFPRS----ICNISSVELIFLTENRFS 258 (914)
Q Consensus 199 L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~L~~N~l~ 258 (914)
|++|+|++|.++ .+|. .++.+++|++|++++|.++. +|.. +..+++|++|+++.|.+.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 777777777775 3444 56666666666666666663 3432 555555555555555543
No 396
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.52 E-value=2.9e-13 Score=151.74 Aligned_cols=329 Identities=10% Similarity=0.041 Sum_probs=182.9
Q ss_pred CCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhccccc
Q 042766 94 SPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNLL 173 (914)
Q Consensus 94 ~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 173 (914)
..++.++++|+.+.|.+ .++..-..+|.++++|+.++|.++ ++..-...|..+++|+.+.+..+ +...-..+|.+..
T Consensus 64 ~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCD 140 (394)
T ss_dssp TTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCC
T ss_pred HHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccc
Confidence 34566777788888764 365333456777788888888654 44233456677777777666544 3323334555544
Q ss_pred cccccccccccccCcCCcccccccccceeecccCCCCCCCCccchhhhcccccccccccccCCCCCccccccccceeecc
Q 042766 174 KLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSICNISSVELIFLT 253 (914)
Q Consensus 174 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 253 (914)
.++......... .-...|.++++|+.+.+.++. ......+|.++.+|+.+++..| ++.+....|.++..|+.+.+.
T Consensus 141 ~~~~~~~~~~~~--i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~ 216 (394)
T 4fs7_A 141 FKEITIPEGVTV--IGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFP 216 (394)
T ss_dssp CSEEECCTTCCE--ECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCC
T ss_pred ccccccCccccc--cchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecC
Confidence 333322222221 223456666777777665443 3244456666666666666655 333445556666666666555
Q ss_pred CCcccCcccccccccCcccceeeccCccCCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCC
Q 042766 254 ENRFSGIFPFDILLNLPNLKKLGIGGNNFVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTG 333 (914)
Q Consensus 254 ~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 333 (914)
.+... +... +....+|+.+.+..+ ++..-...|.++.+|+.+.+..+..+ +....|.....++.+....+.+...
T Consensus 217 ~~~~~--i~~~-~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~~ 291 (394)
T 4fs7_A 217 NSLYY--LGDF-ALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPEK 291 (394)
T ss_dssp TTCCE--ECTT-TTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECTT
T ss_pred CCceE--eehh-hcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeeccc
Confidence 44332 1111 113345555554432 22223344455555555555444322 3344444444444444433322111
Q ss_pred CCCCcchhhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccC
Q 042766 334 TANDLDFVIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTI 413 (914)
Q Consensus 334 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 413 (914)
.+..+. +|+.+.+..+ ++.+...+|.++.+|+.++|.++ ++.+.
T Consensus 292 ---------~F~~~~-------------------------~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~ 335 (394)
T 4fs7_A 292 ---------TFYGCS-------------------------SLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIG 335 (394)
T ss_dssp ---------TTTTCT-------------------------TCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEEC
T ss_pred ---------cccccc-------------------------cccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEh
Confidence 123333 3444444432 44455677888888888888644 66666
Q ss_pred ChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccc
Q 042766 414 PDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLIL 473 (914)
Q Consensus 414 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 473 (914)
..+|.++.+|+.+++..| ++..-..+|.++++|+.+++..+ ++ .+..+|.++++|+.
T Consensus 336 ~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 336 KRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp TTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred HHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 778888888888888776 66566677888888888888755 33 33456777777664
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.52 E-value=1.7e-14 Score=141.63 Aligned_cols=108 Identities=21% Similarity=0.256 Sum_probs=95.4
Q ss_pred hhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCC
Q 042766 497 LVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSN 576 (914)
Q Consensus 497 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 576 (914)
..+++++|+++ .+|..+. ++|++|+|++|+|++.+|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 46778888876 5666554 78999999999999998999999999999999999999888888899999999999999
Q ss_pred ccccccCccccccCCCCeEeCCCCccccccC
Q 042766 577 NLSGKIPEFLENLSFLEFLNLSYNYFEGEVP 607 (914)
Q Consensus 577 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 607 (914)
+|++..+..|..+++|+.|+|++|+|.+.++
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 9998777779999999999999999998876
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=8.2e-14 Score=136.71 Aligned_cols=103 Identities=16% Similarity=0.170 Sum_probs=48.5
Q ss_pred EEecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCc
Q 042766 81 ELNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNK 160 (914)
Q Consensus 81 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 160 (914)
.+++++++++ .+|..+. +.|++|+|++|+|++..|..|+++++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4556666552 3444432 455555555555555445555555555555555555553222233444444444444444
Q ss_pred ccCCCChhcccccccccccccccccc
Q 042766 161 LEGQIPKEIGNLLKLQRLSVDINYLT 186 (914)
Q Consensus 161 l~~~~p~~~~~l~~L~~L~L~~N~l~ 186 (914)
|++..+..|..+++|++|+|++|.+.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cceeCHHHhccccCCCEEEeCCCCcc
Confidence 44332223444444444444444433
No 399
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=9e-14 Score=135.93 Aligned_cols=102 Identities=18% Similarity=0.205 Sum_probs=49.7
Q ss_pred EecCCCCCccccCCCCCCCCCCCEEEcCCCCCcccCCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcc
Q 042766 82 LNLSSQRIGGVLSPYVGNLSFLRYINLADNGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKL 161 (914)
Q Consensus 82 l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 161 (914)
+++++++++. +|..+. +.|++|+|++|+|++..|..|+++++|++|+|++|+|++..|..|..+++|++|+|++|+|
T Consensus 14 l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 14 VDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp EECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 4444455532 443332 4555555555555555455555555555555555555533333344555555555555555
Q ss_pred cCCCChhcccccccccccccccccc
Q 042766 162 EGQIPKEIGNLLKLQRLSVDINYLT 186 (914)
Q Consensus 162 ~~~~p~~~~~l~~L~~L~L~~N~l~ 186 (914)
++..+..|..+++|++|+|++|.++
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 4333334444444444444444444
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=6.6e-13 Score=146.25 Aligned_cols=109 Identities=26% Similarity=0.231 Sum_probs=97.8
Q ss_pred hhcccCC-ccCCCccccccccccceeecccC-CccccccCccccccccccEEEeecccccccCCcchhccCCCCEEEccC
Q 042766 498 VLDLSNN-LLNGSLPLQVGNLKNLVMLDISS-NQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSS 575 (914)
Q Consensus 498 ~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 575 (914)
.++++++ .|+ .+|. +..+++|+.|+|++ |+|++++|..|+++++|+.|+|++|+|++.+|..|..|++|+.|||++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577777 787 4677 99999999999996 999999889999999999999999999999999999999999999999
Q ss_pred CccccccCccccccCCCCeEeCCCCccccccCCC
Q 042766 576 NNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVK 609 (914)
Q Consensus 576 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 609 (914)
|+|++..+..+..++ |+.|+|++|+|.|.++..
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~ 122 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCALR 122 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGH
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCccH
Confidence 999988777787777 999999999999988754
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=1.9e-12 Score=142.46 Aligned_cols=108 Identities=19% Similarity=0.189 Sum_probs=77.7
Q ss_pred CCccceeecCCCCceEEEecCCCCCccccCCCCCCCCCCCEEEcCC-CCCcccCCcccCCCCCCCeeecCCCCCCCcCCC
Q 042766 65 CQWTGVTCGHRHQRLTELNLSSQRIGGVLSPYVGNLSFLRYINLAD-NGFRGDIPQEIGNLFRLEKLALSNNSFSGTIPT 143 (914)
Q Consensus 65 c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 143 (914)
|.|.+|.|+.. |+|++ +|+ +..+++|++|+|++ |.|++..|..|++|++|++|+|++|+|++..|.
T Consensus 8 C~~~~v~~~~~-----------n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCTRD-----------GALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECCSS-----------CCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcCCC-----------CCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 88888877431 14543 666 88888888888885 888877777788888888888888888877777
Q ss_pred CccccCCcchhccCCCcccCCCChhcccccccccccccccccc
Q 042766 144 NLSRCSNLIHFCASNNKLEGQIPKEIGNLLKLQRLSVDINYLT 186 (914)
Q Consensus 144 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 186 (914)
.|+++++|++|||++|+|++..+..|..++ |++|+|++|.+.
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 777777777777777777754444454444 666666666665
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.30 E-value=4.8e-14 Score=155.99 Aligned_cols=66 Identities=17% Similarity=0.149 Sum_probs=31.2
Q ss_pred ccccceeecccCCcccccc----CccccccccccEEEeeccccccc----CCcchhccCCCCEEEccCCccccc
Q 042766 516 NLKNLVMLDISSNQFSGVI----PVTLSTCVSLEYLDISINSFYGV----IPLSFRFLKSIKALNVSSNNLSGK 581 (914)
Q Consensus 516 ~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ 581 (914)
..++|++|||++|+|++.. +..+...++|+.|+|++|.|+.. +...+...++|++|||++|.|+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 3445555555555554321 23344445555555555555432 222233345555555555555443
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.28 E-value=5.4e-11 Score=133.24 Aligned_cols=85 Identities=8% Similarity=0.141 Sum_probs=41.1
Q ss_pred hhccccc-cccccccccccccCcCCcccccccccceeecccCC---CCCCCCccchhhhcccccccccccccCCCCCccc
Q 042766 167 KEIGNLL-KLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENS---LGGKIPTTLGLLRRLVNLNVAENQFSGMFPRSIC 242 (914)
Q Consensus 167 ~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 242 (914)
.+|.+.. .|+.+.+..+ ++..-..+|.++++|+.+.++.|. ++..-..+|.++.+|+.+.+..+ ++.+...+|.
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~ 134 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFH 134 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTT
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhh
Confidence 3555543 4666666433 443444556666666666665543 33333444555555555544433 2223333444
Q ss_pred cccccceeecc
Q 042766 243 NISSVELIFLT 253 (914)
Q Consensus 243 ~l~~L~~L~L~ 253 (914)
.+.+|+.+.+.
T Consensus 135 ~c~~L~~i~lp 145 (394)
T 4gt6_A 135 HCEELDTVTIP 145 (394)
T ss_dssp TCTTCCEEECC
T ss_pred hhccccccccc
Confidence 44444444443
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.27 E-value=1.6e-10 Score=129.30 Aligned_cols=294 Identities=13% Similarity=0.120 Sum_probs=140.5
Q ss_pred cccccCcccceeeccCcc---CCCCCCCccccccccccccccCccCCccccccccccccccceeccCCcCCCCCCCCcch
Q 042766 264 DILLNLPNLKKLGIGGNN---FVGSIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQNNLGTGTANDLDF 340 (914)
Q Consensus 264 ~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 340 (914)
..|.++++|+.+.++.|. ++.+-..+|.++.+|+.+.+..+ ++.+...+|..+.+|+.+.+..+ +..+..
T Consensus 81 ~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~----- 153 (394)
T 4gt6_A 81 NAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVAD----- 153 (394)
T ss_dssp TTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECT-----
T ss_pred HHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecc-----
Confidence 334444444444444432 33233345555555555555433 44444555556666666555432 222211
Q ss_pred hhcccCCCCCcEEeccccccCCCcCchhhccccccEEEEeecccccccCCccccCCCCCcEEEcccCcccccCChhhhc-
Q 042766 341 VIFLSNCSSLKVLSLSDNQFGGELPHSIANLSLKMIELSVGRNQISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISE- 419 (914)
Q Consensus 341 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~- 419 (914)
..+.++.+|+.+.+..+ ++ .+....+... .|+.+.+..+- ......+|.++.+++......+.........+..
T Consensus 154 -~~F~~c~~L~~i~~~~~-~~-~I~~~aF~~~-~l~~i~ip~~~-~~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~ 228 (394)
T 4gt6_A 154 -GMFSYCYSLHTVTLPDS-VT-AIEERAFTGT-ALTQIHIPAKV-TRIGTNAFSECFALSTITSDSESYPAIDNVLYEKS 228 (394)
T ss_dssp -TTTTTCTTCCEEECCTT-CC-EECTTTTTTC-CCSEEEECTTC-CEECTTTTTTCTTCCEEEECCSSSCBSSSCEEEEC
T ss_pred -cceecccccccccccce-ee-Eecccccccc-ceeEEEECCcc-cccccchhhhccccceecccccccccccceeeccc
Confidence 12455556666665543 22 2222222222 35555554432 2345566777777777766655543211111111
Q ss_pred ------------ccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccccccCCCccCCCCch
Q 042766 420 ------------LKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLILFIASYNKLTGDLPQ 487 (914)
Q Consensus 420 ------------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 487 (914)
...+..+.+. +.++..-..+|.+++.|+.+.+.++..+ ....+|.+++.|+.+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~---------- 296 (394)
T 4gt6_A 229 ANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS---------- 296 (394)
T ss_dssp TTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC----------
T ss_pred ccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC----------
Confidence 1112222221 1122223344555555555555443322 333445555555444332
Q ss_pred hhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeecccccccCCcchhccCC
Q 042766 488 QLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKS 567 (914)
Q Consensus 488 ~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 567 (914)
+.++.+...+|.++.+|+.++|..+ ++.+...+|.+|.+|+.+.|..+ ++..-..+|.++++
T Consensus 297 ----------------~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~ 358 (394)
T 4gt6_A 297 ----------------SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTA 358 (394)
T ss_dssp ----------------TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTT
T ss_pred ----------------CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCC
Confidence 1222233456677777777777654 55555667777777777777544 55555667777777
Q ss_pred CCEEEccCCccccccCccccccCCCCeEeCCCCcc
Q 042766 568 IKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYF 602 (914)
Q Consensus 568 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 602 (914)
|+.+++.+|.... ..+.....|+.+.+..|.+
T Consensus 359 L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 359 LNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred CCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 7777777765432 3455566677766665543
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.23 E-value=2.4e-13 Score=150.36 Aligned_cols=161 Identities=17% Similarity=0.149 Sum_probs=112.1
Q ss_pred ccCCceeeecccccccccCccccCC-----CCCCeEEeeCCcCCCCCCCcc-CCCCCccccccCCCccCCCCchhhhccc
Q 042766 420 LKNLQQLSVFNNFLRGGIPSGLGNL-----TKLGSLDLGSNSLQGNIPSSL-GNCQNLILFIASYNKLTGDLPQQLLSIT 493 (914)
Q Consensus 420 l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 493 (914)
+++|+.|+|++|.++......+... ++|+.|+|++|.++......+ ..+++|+.|++++|.++
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~----------- 139 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLG----------- 139 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCC-----------
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCC-----------
Confidence 4678888888888875444443332 578888888887764322222 23445566666666554
Q ss_pred chhhhhcccCCccCCCccccc-----cccccceeecccCCccccc----cCccccccccccEEEeeccccccc----CCc
Q 042766 494 TLSLVLDLSNNLLNGSLPLQV-----GNLKNLVMLDISSNQFSGV----IPVTLSTCVSLEYLDISINSFYGV----IPL 560 (914)
Q Consensus 494 ~l~~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~ 560 (914)
......+ ...++|+.|+|++|.|+.. ++..+..+++|++|||++|.|++. ++.
T Consensus 140 --------------~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~ 205 (372)
T 3un9_A 140 --------------PEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAA 205 (372)
T ss_dssp --------------HHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHH
T ss_pred --------------HHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHH
Confidence 2211222 2346899999999999753 344557789999999999999753 356
Q ss_pred chhccCCCCEEEccCCccccc----cCccccccCCCCeEeCCCCccccc
Q 042766 561 SFRFLKSIKALNVSSNNLSGK----IPEFLENLSFLEFLNLSYNYFEGE 605 (914)
Q Consensus 561 ~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~ 605 (914)
.+...++|++|+|++|.|+.. ++..+...+.|++|||++|+++..
T Consensus 206 ~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 206 QLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 677889999999999999854 445566678999999999998753
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=3.8e-11 Score=126.45 Aligned_cols=148 Identities=16% Similarity=0.141 Sum_probs=112.3
Q ss_pred HHHHhhcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCC
Q 042766 700 LSKATSEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEG 778 (914)
Q Consensus 700 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 778 (914)
+......|+.....+.|+.+.||++... +..+++|+...........+.+|+++++.+. +..+.++++++..
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~----- 81 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH----- 81 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-----
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec-----
Confidence 3445567888888898999999998754 5689999986432233456889999999985 6678888888543
Q ss_pred CceEeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhC--------------------------
Q 042766 779 VDFKALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH-------------------------- 832 (914)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~-------------------------- 832 (914)
.+..|+||||++|.++.+..... .....++.+++++++.||+.
T Consensus 82 ~~~~~lv~e~i~G~~l~~~~~~~-----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (263)
T 3tm0_A 82 DGWSNLLMSEADGVLCSEEYEDE-----------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDL 150 (263)
T ss_dssp TTEEEEEEECCSSEEHHHHCCTT-----------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTC
T ss_pred CCceEEEEEecCCeehhhccCCc-----------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccc
Confidence 34789999999999998763211 12246788999999999981
Q ss_pred ------------------------------CCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 833 ------------------------------CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 833 ------------------------------~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
..+.++|+|++|.||+++.++.+.|+||+.+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 151 ADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 013589999999999998766677999998864
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.01 E-value=3e-10 Score=119.34 Aligned_cols=138 Identities=14% Similarity=0.093 Sum_probs=96.9
Q ss_pred hcccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCC--cceEEeEeecCCCCCCceE
Q 042766 705 SEFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRN--LIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 705 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~~~~~ 782 (914)
..+.+....+.|..+.||++.. .+|..+++|+.... ....+.+|+++++.+.+.+ +.+++++... .+..
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~-----~~~~ 90 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTE-----AGRD 90 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-----SSCE
T ss_pred CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccC-----CCCC
Confidence 3455444444666799999965 35677999987533 2356788999999986544 4567776432 2357
Q ss_pred eEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------
Q 042766 783 ALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHC----------------------------- 833 (914)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~----------------------------- 833 (914)
++||||++|.++. ... .+ ...++.++++.++.+|+..
T Consensus 91 ~~v~e~i~G~~l~--~~~---------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
T 1nd4_A 91 WLLLGEVPGQDLL--SSH---------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQD 156 (264)
T ss_dssp EEEEECCSSEETT--TSC---------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTT
T ss_pred EEEEEecCCcccC--cCc---------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccch
Confidence 9999999998884 211 11 1246677778888888641
Q ss_pred --------------------------CCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 834 --------------------------QPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 834 --------------------------~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
.+.++|+|++|.||+++.++.++|+|||.|..
T Consensus 157 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 157 DLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp SCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998877778999999864
No 408
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.96 E-value=1.4e-12 Score=135.46 Aligned_cols=79 Identities=16% Similarity=0.244 Sum_probs=42.1
Q ss_pred ccccccccccccccccC--cCCcccccccccceeecccCCCCCCCCccchhhh--cccccccccccccCCCCC-------
Q 042766 171 NLLKLQRLSVDINYLTG--QLPDSVGNLSAIEVIRITENSLGGKIPTTLGLLR--RLVNLNVAENQFSGMFPR------- 239 (914)
Q Consensus 171 ~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~------- 239 (914)
++++|++|+|++|+|++ .+|..+..+++|+.|+|++|.|++. ..+..+. +|++|+|++|.+++.+|.
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 34555555555555554 3344455555555555555555543 2233333 566666666666654442
Q ss_pred ccccccccceee
Q 042766 240 SICNISSVELIF 251 (914)
Q Consensus 240 ~~~~l~~L~~L~ 251 (914)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 245566666654
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.96 E-value=1.6e-08 Score=112.43 Aligned_cols=165 Identities=13% Similarity=0.132 Sum_probs=84.8
Q ss_pred cCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCCCCccc
Q 042766 394 RNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNCQNLIL 473 (914)
Q Consensus 394 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 473 (914)
....++..+.+..+. .......+....+|+.+.+..+ +......+|.++..|+.+.+..+ ++..-..+|.++.+|+.
T Consensus 191 ~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~ 267 (379)
T 4h09_A 191 PAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKT 267 (379)
T ss_dssp CTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCE
T ss_pred cccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcc
Confidence 334444444443322 2234445555566666665443 23234445556666666666544 43334445555555554
Q ss_pred cccCCCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEEeeccc
Q 042766 474 FIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINS 553 (914)
Q Consensus 474 L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 553 (914)
+.+..+ + ......+|.++++|+.+++.++.++.+...+|.++.+|+.++|..+
T Consensus 268 i~l~~~-i-------------------------~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~- 320 (379)
T 4h09_A 268 LNFYAK-V-------------------------KTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA- 320 (379)
T ss_dssp EEECCC-C-------------------------SEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-
T ss_pred cccccc-c-------------------------eeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-
Confidence 433211 1 1122234556666666666666666555666666666666666543
Q ss_pred ccccCCcchhccCCCCEEEccCCccccccCcccccc
Q 042766 554 FYGVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENL 589 (914)
Q Consensus 554 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 589 (914)
++..-..+|.++.+|+.+.+..+ ++.+-..+|.+.
T Consensus 321 l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 321 LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 44444556666666666666543 443444455443
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.93 E-value=7.7e-11 Score=129.04 Aligned_cols=104 Identities=14% Similarity=0.181 Sum_probs=65.9
Q ss_pred CCCceEEEecCCCCCcc-c-------cCCCCCCCCCCCEEEcCCCCCc---------ccCCcccCCCCCCCeeecCCCCC
Q 042766 75 RHQRLTELNLSSQRIGG-V-------LSPYVGNLSFLRYINLADNGFR---------GDIPQEIGNLFRLEKLALSNNSF 137 (914)
Q Consensus 75 ~~~~v~~l~l~~~~l~~-~-------~~~~l~~l~~L~~L~L~~n~l~---------~~~p~~~~~l~~L~~L~Ls~N~l 137 (914)
...+|+.|.+...++.| . +..++..+++|+.|.+.++... +.++..+..+++|+.|+|++|.-
T Consensus 105 ~~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~ 184 (362)
T 2ra8_A 105 KLPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNN 184 (362)
T ss_dssp TGGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBT
T ss_pred CchhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCC
Confidence 34578888888766553 1 2344567889999988775432 22444556778888888887731
Q ss_pred CCcCCCCccccCCcchhccCCCcccCCCChhcc--ccccccccccc
Q 042766 138 SGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIG--NLLKLQRLSVD 181 (914)
Q Consensus 138 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~ 181 (914)
. .+|. + .+++|++|+|+.|.+.......++ .+++|++|+|+
T Consensus 185 l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 185 L-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp C-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred c-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 1 2333 3 377888888877776543333443 56777777775
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.89 E-value=1.6e-10 Score=126.44 Aligned_cols=111 Identities=15% Similarity=0.165 Sum_probs=55.5
Q ss_pred CCCCEEEcCCCCCcc-c-------CCcccCCCCCCCeeecCCCCCCCcCCCCccccCCcchhccCCCcccCCCChhcccc
Q 042766 101 SFLRYINLADNGFRG-D-------IPQEIGNLFRLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNKLEGQIPKEIGNL 172 (914)
Q Consensus 101 ~~L~~L~L~~n~l~~-~-------~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 172 (914)
+.++.|.+....+.| . +..++.++++|+.|.+.++.... .+++... .+.++..+..+
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~--------------~~is~~~-~~~L~~ll~~~ 171 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEE--------------QEISWIE-QVDLSPVLDAM 171 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTT--------------CCGGGCB-CCBCHHHHHTC
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhh--------------ccccccc-ccCHHHHHhcC
Confidence 456777777665543 1 12334566777777776543210 0000000 11233445566
Q ss_pred ccccccccccccccCcCCcccccccccceeecccCCCCCCCCccch--hhhcccccccc
Q 042766 173 LKLQRLSVDINYLTGQLPDSVGNLSAIEVIRITENSLGGKIPTTLG--LLRRLVNLNVA 229 (914)
Q Consensus 173 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls 229 (914)
++|+.|+|++|.-. .++. + .+++|+.|+|..|.+.......+. .+++|+.|+|+
T Consensus 172 P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp TTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred CCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 67777777666211 2222 2 256677777766665432222232 45666666664
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.86 E-value=3.7e-09 Score=116.62 Aligned_cols=145 Identities=15% Similarity=0.219 Sum_probs=104.6
Q ss_pred ccCcccCCccEEEEEEEECCCcEEEEEEEee--ccC-CcchHHHHHHHHHHHhcC--CCCcceEEeEeecCCCCCCceEe
Q 042766 709 SSNMIGQGRFGTVYKGILGDDEMVVAVKVIN--LKQ-KGASKSFVSECEALRNIR--HRNLIKIITICSSTDFEGVDFKA 783 (914)
Q Consensus 709 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~~~~~~ 783 (914)
..+.++.|.++.||+++.. +..+++|+.. ... ......+.+|+++++.+. +..+.+++.++.... ..+..+
T Consensus 42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~--~~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES--VIGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT--TTSSCE
T ss_pred eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC--ccCCeE
Confidence 3567899999999998875 3567888765 322 122357788999999997 455788888865432 123568
Q ss_pred EEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------
Q 042766 784 LVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHC------------------------------ 833 (914)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~------------------------------ 833 (914)
+||||++|..+.+.. ...++..++..++.+++++|+.||+..
T Consensus 118 ~vme~v~G~~l~~~~--------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS--------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLS 189 (359)
T ss_dssp EEEECCCCBCCCCTT--------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCeecCCCc--------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhc
Confidence 999999997774311 124667788889999999999999731
Q ss_pred -------------------------CCCcEecCCCCCCeeecCCCc--EEEeccccccc
Q 042766 834 -------------------------QPPMVHGDLKPSNVLLDYDMV--AHVGDFGLAKF 865 (914)
Q Consensus 834 -------------------------~~~ivHrDlkp~NILl~~~~~--~ki~DFGla~~ 865 (914)
.+.++|+|++|.||+++.++. +.|+||+.|..
T Consensus 190 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 190 ETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999999874
No 413
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.86 E-value=4.6e-08 Score=108.68 Aligned_cols=147 Identities=14% Similarity=0.106 Sum_probs=80.9
Q ss_pred CCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecccccccccCccccCCCCCCeEEeeCCcCCCCCCCccCCC
Q 042766 389 IPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFNNFLRGGIPSGLGNLTKLGSLDLGSNSLQGNIPSSLGNC 468 (914)
Q Consensus 389 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 468 (914)
...++..+.+|+.+.+..+ +..+....|.++..|+.+.+..+ ++..-..+|.++.+|+.+.+..+ +......+|.+|
T Consensus 209 ~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c 285 (379)
T 4h09_A 209 TAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGC 285 (379)
T ss_dssp CTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTC
T ss_pred eecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccc
Confidence 3445555666666666543 33344555666666666666554 44344555666666666666543 443444566666
Q ss_pred CCccccccCCCccCCCCchhhhcccchhhhhcccCCccCCCccccccccccceeecccCCccccccCccccccccccEEE
Q 042766 469 QNLILFIASYNKLTGDLPQQLLSITTLSLVLDLSNNLLNGSLPLQVGNLKNLVMLDISSNQFSGVIPVTLSTCVSLEYLD 548 (914)
Q Consensus 469 ~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 548 (914)
++|+.+.+..+.++ .+-..+|.++.+|+.++|..+ ++.+...+|.++++|+.+.
T Consensus 286 ~~L~~i~l~~~~i~-------------------------~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ 339 (379)
T 4h09_A 286 SNLTKVVMDNSAIE-------------------------TLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTIS 339 (379)
T ss_dssp TTCCEEEECCTTCC-------------------------EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCC
T ss_pred cccccccccccccc-------------------------eehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEE
Confidence 66666555444433 122334555666666666543 4444555666666666666
Q ss_pred eecccccccCCcchhcc
Q 042766 549 ISINSFYGVIPLSFRFL 565 (914)
Q Consensus 549 Ls~N~l~~~~p~~~~~l 565 (914)
+..+ ++.+-..+|.+.
T Consensus 340 ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 340 YPKS-ITLIESGAFEGS 355 (379)
T ss_dssp CCTT-CCEECTTTTTTS
T ss_pred ECCc-cCEEchhHhhCC
Confidence 6543 444445555544
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.54 E-value=2.8e-07 Score=99.66 Aligned_cols=136 Identities=19% Similarity=0.211 Sum_probs=98.4
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCC----CCcceEEeEeecCCCCCCce
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRH----RNLIKIITICSSTDFEGVDF 781 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~~~~ 781 (914)
.....+.++.|....||++ +..+++|+... ......+.+|+++++.+.+ ..+.+++++ +.
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------~~ 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ---------SD 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------CS
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------CC
Confidence 4555678999999999998 34578887632 2224568899999998876 224555544 23
Q ss_pred EeEEEecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------
Q 042766 782 KALVFEYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHC---------------------------- 833 (914)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~---------------------------- 833 (914)
.++||||++|.++.+... ..++..+...++.+++..++.||+..
T Consensus 102 ~~lvme~i~G~~l~~~~~--------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (320)
T 3r70_A 102 RFNIMKYIKGERITYEQY--------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLIS 173 (320)
T ss_dssp SCEEEECCCCBCCCHHHH--------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHH
T ss_pred cEEEEeecCCcccccccc--------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHH
Confidence 579999999988864321 23456666777778888888887542
Q ss_pred --------------------------------CCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 834 --------------------------------QPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 834 --------------------------------~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
.+.++|+|++|.||+++.++.+.|+||+.|..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 174 ILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 12459999999999999976679999999864
No 415
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.54 E-value=1.3e-07 Score=101.60 Aligned_cols=139 Identities=19% Similarity=0.252 Sum_probs=98.4
Q ss_pred cCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC-CCC--cceEEeEeecCCCCCCceEeEEE
Q 042766 710 SNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR-HRN--LIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 710 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
.+.++.|....||++. ..+++|+.... .....+.+|+++++.+. +.. +.+.+..+... ......|+||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~--~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPS--ETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCC--SSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCC--CCCCcceEEE
Confidence 4568999999999864 34788886422 34567899999998883 333 44555443221 1112458899
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhC----------------------------------
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH---------------------------------- 832 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~---------------------------------- 832 (914)
||++|.++.+... ..++..++..++.++++.++.||+.
T Consensus 96 ~~i~G~~l~~~~~--------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
T 3sg8_A 96 TKIKGVPLTPLLL--------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKG 167 (304)
T ss_dssp ECCCCEECCHHHH--------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCH
T ss_pred cccCCeECCcccc--------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCc
Confidence 9999988865332 2456677778888888888888861
Q ss_pred ---------------------CCCCcEecCCCCCCeeecC--CCcEEEeccccccc
Q 042766 833 ---------------------CQPPMVHGDLKPSNVLLDY--DMVAHVGDFGLAKF 865 (914)
Q Consensus 833 ---------------------~~~~ivHrDlkp~NILl~~--~~~~ki~DFGla~~ 865 (914)
..+.++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 168 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 168 PQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred ccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 1246899999999999998 45688999999864
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.53 E-value=9.9e-09 Score=106.41 Aligned_cols=92 Identities=18% Similarity=0.250 Sum_probs=57.3
Q ss_pred ccccccccc--ccccccccc---CcCCcccccccccceeecccCCCCC--CCCccchhhhcccccccccccccCCCCCcc
Q 042766 169 IGNLLKLQR--LSVDINYLT---GQLPDSVGNLSAIEVIRITENSLGG--KIPTTLGLLRRLVNLNVAENQFSGMFPRSI 241 (914)
Q Consensus 169 ~~~l~~L~~--L~L~~N~l~---~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 241 (914)
|...+.|+. ++++.|+.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444455555 556666332 2222223567788888888888887 4556777888888888888888754 233
Q ss_pred cccc--ccceeeccCCcccCccc
Q 042766 242 CNIS--SVELIFLTENRFSGIFP 262 (914)
Q Consensus 242 ~~l~--~L~~L~L~~N~l~~~~p 262 (914)
..+. +|+.|+|++|.+.+.+|
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCS
T ss_pred hhcccCCcceEEccCCcCccccC
Confidence 3333 66666666666665443
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.45 E-value=5e-09 Score=103.47 Aligned_cols=94 Identities=14% Similarity=0.135 Sum_probs=52.0
Q ss_pred cCCCCCCCCCCCEEEcCCC-CCcc----cCCcccCCCCCCCeeecCCCCCCCc----CCCCccccCCcchhccCCCcccC
Q 042766 93 LSPYVGNLSFLRYINLADN-GFRG----DIPQEIGNLFRLEKLALSNNSFSGT----IPTNLSRCSNLIHFCASNNKLEG 163 (914)
Q Consensus 93 ~~~~l~~l~~L~~L~L~~n-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~ 163 (914)
+...+...+.|++|+|++| .+.. .+...+...++|++|+|++|+|... +...+...++|++|+|++|.++.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3344556677777777777 7753 2344556667777777777777532 22333444556666666666553
Q ss_pred C----CChhcccccccccccc--cccccc
Q 042766 164 Q----IPKEIGNLLKLQRLSV--DINYLT 186 (914)
Q Consensus 164 ~----~p~~~~~l~~L~~L~L--~~N~l~ 186 (914)
. +...+...++|++|+| ++|.++
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2 2233333444555555 445444
No 418
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.32 E-value=2.5e-06 Score=91.46 Aligned_cols=137 Identities=16% Similarity=0.163 Sum_probs=90.8
Q ss_pred cCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCC---CcceEEeEeecCCCCCCceEeEEE
Q 042766 710 SNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHR---NLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 710 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
.+.++.|....||+. +..+++|+.. .......+.+|+++++.+.+. .+.+.+.++.. ..+..++||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~----~~g~~~~v~ 92 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR----SDGNPFVGY 92 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC----TTSCEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc----CCCceEEEE
Confidence 346788888999987 3457888752 223456789999999999752 35666666531 124568999
Q ss_pred ecccCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhC----------------------------------
Q 042766 787 EYMENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHH---------------------------------- 832 (914)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~---------------------------------- 832 (914)
||++|.++.+... ..++..+...++.++++.++.||+.
T Consensus 93 e~i~G~~l~~~~~--------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l 164 (306)
T 3tdw_A 93 RKVQGQILGEDGM--------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLL 164 (306)
T ss_dssp ECCCSEECHHHHH--------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGS
T ss_pred eccCCeECchhhh--------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhccccc
Confidence 9999988866321 1123333444444444444444432
Q ss_pred -----------------------CCCCcEecCCCCCCeeecC---CCc-EEEeccccccc
Q 042766 833 -----------------------CQPPMVHGDLKPSNVLLDY---DMV-AHVGDFGLAKF 865 (914)
Q Consensus 833 -----------------------~~~~ivHrDlkp~NILl~~---~~~-~ki~DFGla~~ 865 (914)
..+.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 165 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 165 DESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred chhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2346799999999999987 455 58999998864
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.30 E-value=3.5e-06 Score=88.58 Aligned_cols=136 Identities=18% Similarity=0.115 Sum_probs=97.0
Q ss_pred cccCCccE-EEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC-CCCcceEEeEeecCCCCCCceEeEEEecc
Q 042766 712 MIGQGRFG-TVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR-HRNLIKIITICSSTDFEGVDFKALVFEYM 789 (914)
Q Consensus 712 ~lg~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 789 (914)
.+..|..| .||+......+..+++|+-.. .....+.+|+..++.+. +--+.++++++... +..++|||++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~-----~~~~lvme~l 102 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTP-----DDAWLLTTAI 102 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEET-----TEEEEEEECC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEEC-----CeEEEEEEee
Confidence 34455554 699988776777888998642 23457888999998884 33466777775433 4679999999
Q ss_pred cCCCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 042766 790 ENGSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHC------------------------------------ 833 (914)
Q Consensus 790 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~------------------------------------ 833 (914)
+|.++.+...... .....++.+++..++-||+..
T Consensus 103 ~G~~~~~~~~~~~----------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (272)
T 4gkh_A 103 PGKTAFQVLEEYP----------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN 172 (272)
T ss_dssp CSEEHHHHHHHCG----------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred CCccccccccCCH----------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence 9988887654321 122345667777777777521
Q ss_pred -------------------CCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 834 -------------------QPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 834 -------------------~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
.+.++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12489999999999999887778999998864
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.30 E-value=1.7e-06 Score=91.55 Aligned_cols=77 Identities=14% Similarity=0.137 Sum_probs=59.9
Q ss_pred cccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCC---CcceEEeEeecCCCCCCceEeE
Q 042766 708 SSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHR---NLIKIITICSSTDFEGVDFKAL 784 (914)
Q Consensus 708 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~~~~~~l 784 (914)
...+.++.|.++.||+++.. +|+.+++|+...........+.+|++.++.+.+. .+.+++++. ..++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~~l 87 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRTL 87 (288)
T ss_dssp EEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTEE
T ss_pred cceeeeCCcchhheEEEEeC-CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------CcEE
Confidence 34567999999999999875 5778999987543333457889999999999865 577887752 2489
Q ss_pred EEecccCCCH
Q 042766 785 VFEYMENGSL 794 (914)
Q Consensus 785 v~e~~~~gsL 794 (914)
||||++|+++
T Consensus 88 vme~l~g~~~ 97 (288)
T 3d1u_A 88 AMEWVDERPP 97 (288)
T ss_dssp EEECCCCCCC
T ss_pred EEEecccCCC
Confidence 9999999864
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.29 E-value=3.6e-08 Score=97.27 Aligned_cols=95 Identities=18% Similarity=0.278 Sum_probs=60.4
Q ss_pred cCCcccCCCCCCCeeecCCC-CCCCc----CCCCccccCCcchhccCCCcccCC----CChhcccccccccccccccccc
Q 042766 116 DIPQEIGNLFRLEKLALSNN-SFSGT----IPTNLSRCSNLIHFCASNNKLEGQ----IPKEIGNLLKLQRLSVDINYLT 186 (914)
Q Consensus 116 ~~p~~~~~l~~L~~L~Ls~N-~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 186 (914)
.+...+...+.|++|+|++| .+... +...+...++|++|+|++|++... +...+...++|++|+|++|.|+
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34455677889999999998 88632 334455667788888888887632 2233444466777777777776
Q ss_pred Cc----CCcccccccccceeec--ccCCCC
Q 042766 187 GQ----LPDSVGNLSAIEVIRI--TENSLG 210 (914)
Q Consensus 187 ~~----~p~~~~~l~~L~~L~L--~~N~l~ 210 (914)
.. +...+...++|++|+| ++|.++
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 42 3344455555666666 556555
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.07 E-value=1.3e-05 Score=87.94 Aligned_cols=77 Identities=9% Similarity=0.111 Sum_probs=55.2
Q ss_pred cccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCC--cceEEeEeecCCCCCCceEeEE
Q 042766 708 SSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRN--LIKIITICSSTDFEGVDFKALV 785 (914)
Q Consensus 708 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~~~~~~lv 785 (914)
...+.++.|....+|+... ++..+++|+.... ..+.+|+.+++.+.... +.++++++.... +..++|
T Consensus 44 ~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~----g~~~lv 112 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSE----SLTYCI 112 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS----SCEEEE
T ss_pred ceEEECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCC----CCeEEE
Confidence 3456788999999999875 4678889987421 36889999999886533 456666644321 457899
Q ss_pred EecccCCCHH
Q 042766 786 FEYMENGSLE 795 (914)
Q Consensus 786 ~e~~~~gsL~ 795 (914)
|||++|.++.
T Consensus 113 ~e~l~G~~l~ 122 (362)
T 3ovc_A 113 SRRAQGVTLQ 122 (362)
T ss_dssp EECCCSEETT
T ss_pred EEecCCCCcc
Confidence 9999986553
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.95 E-value=1.2e-05 Score=88.25 Aligned_cols=84 Identities=11% Similarity=0.065 Sum_probs=55.1
Q ss_pred cCcc-cCCccEEEEEEEEC---C---CcEEEEEEEeeccC---CcchHHHHHHHHHHHhcC-C--CCcceEEeEeecCCC
Q 042766 710 SNMI-GQGRFGTVYKGILG---D---DEMVVAVKVINLKQ---KGASKSFVSECEALRNIR-H--RNLIKIITICSSTDF 776 (914)
Q Consensus 710 ~~~l-g~G~~g~Vy~~~~~---~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~ 776 (914)
.+.| +.|....+|+.... + ++..+++|+..... ......+.+|+++++.+. + -.+.++++++.....
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88889999998753 1 15678889765322 111256788999988884 2 356778877543321
Q ss_pred CCCceEeEEEecccCCCHH
Q 042766 777 EGVDFKALVFEYMENGSLE 795 (914)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~ 795 (914)
.+..++||||++|..+.
T Consensus 105 --~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 --LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp --TSSCEEEEECCCCBCCC
T ss_pred --cCCceEEEEecCCCChh
Confidence 13457899999986653
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.95 E-value=1.6e-05 Score=88.57 Aligned_cols=76 Identities=16% Similarity=0.101 Sum_probs=49.4
Q ss_pred cCcccCCccEEEEEEEECCCcEEEEEEEeeccCC-------cchHHHHHHHHHHHhcCC--C-CcceEEeEeecCCCCCC
Q 042766 710 SNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQK-------GASKSFVSECEALRNIRH--R-NLIKIITICSSTDFEGV 779 (914)
Q Consensus 710 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~~ 779 (914)
.+.+|.|.++.||+++...+++.|+||....... ...+++..|+++++.+.. | .+.+++.+. .
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~----- 107 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--T----- 107 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--T-----
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--C-----
Confidence 4578999999999998765667899998653211 233567889999988742 3 344565442 1
Q ss_pred ceEeEEEecccCC
Q 042766 780 DFKALVFEYMENG 792 (914)
Q Consensus 780 ~~~~lv~e~~~~g 792 (914)
+..++||||+++.
T Consensus 108 ~~~~lvmE~l~g~ 120 (397)
T 2olc_A 108 EMAVTVMEDLSHL 120 (397)
T ss_dssp TTTEEEECCCTTS
T ss_pred CccEEEEEeCCCc
Confidence 1347999999764
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.49 E-value=0.00033 Score=76.05 Aligned_cols=149 Identities=17% Similarity=0.156 Sum_probs=79.0
Q ss_pred CcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCC--CCcceEEeEeecCC-CCCCceEeEEEe
Q 042766 711 NMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRH--RNLIKIITICSSTD-FEGVDFKALVFE 787 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~-~~~~~~~~lv~e 787 (914)
+.++.|..+.||++... ++ .+++|+... .......|+++++.+.. -.+.+++....... .+..+..++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~-~~-~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTD-SG-AVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEET-TE-EEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeC-CC-CEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 34666778899998874 33 488998864 12344456666665531 12333332100000 012346789999
Q ss_pred cccCCCHH-----------HH---Hhcc-CCc--c-c----ccCCCHHHH------------------------------
Q 042766 788 YMENGSLE-----------DW---LHQS-NDQ--V-E----VRKLSLIQR------------------------------ 815 (914)
Q Consensus 788 ~~~~gsL~-----------~~---l~~~-~~~--~-~----~~~~~~~~~------------------------------ 815 (914)
|++|.++. +. ++.. ... . . .....|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986532 11 1110 000 0 0 001122110
Q ss_pred -HHHHHHHHHHHHHHHh----------CCCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 816 -MNIAIDVASAIEYLHH----------HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 816 -~~i~~~i~~gl~~LH~----------~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
..+..++..+++++++ ...+.++|+|+++.||+++.++.+.|+||+.+..
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 1111223445666653 0235899999999999998888999999998853
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.46 E-value=4.2e-05 Score=73.31 Aligned_cols=84 Identities=14% Similarity=0.044 Sum_probs=56.2
Q ss_pred ccceeecccCCccccccCccccccccccEEEeeccc-ccccCCcchhcc----CCCCEEEccCCc-cccccCccccccCC
Q 042766 518 KNLVMLDISSNQFSGVIPVTLSTCVSLEYLDISINS-FYGVIPLSFRFL----KSIKALNVSSNN-LSGKIPEFLENLSF 591 (914)
Q Consensus 518 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 591 (914)
..|+.||||++.++..--..+.++++|+.|+|+++. ++..--..+..+ ++|++|+|+++. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 357778888877766555566777888888888874 554333344443 368888888764 66544455667788
Q ss_pred CCeEeCCCCc
Q 042766 592 LEFLNLSYNY 601 (914)
Q Consensus 592 L~~L~ls~N~ 601 (914)
|++|+|++.+
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 8888887664
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.42 E-value=1.6e-05 Score=76.30 Aligned_cols=82 Identities=4% Similarity=0.056 Sum_probs=35.0
Q ss_pred CCCeeecCCCCCCCcCCCCccccCCcchhccCCCc-ccCCCChhcccc----cccccccccccc-ccCcCCccccccccc
Q 042766 126 RLEKLALSNNSFSGTIPTNLSRCSNLIHFCASNNK-LEGQIPKEIGNL----LKLQRLSVDINY-LTGQLPDSVGNLSAI 199 (914)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~L 199 (914)
+|++||||++.++..--..+..+++|++|+|++|. ++..--..++.+ ++|++|+|++|. +|..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34444444444443222233444444444444442 332111223322 245566665553 443222234445555
Q ss_pred ceeecccC
Q 042766 200 EVIRITEN 207 (914)
Q Consensus 200 ~~L~L~~N 207 (914)
+.|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555554
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.37 E-value=0.0008 Score=71.56 Aligned_cols=150 Identities=17% Similarity=0.198 Sum_probs=92.7
Q ss_pred cCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcC---CCCcceEEeEeecCCCCCCceEeEEE
Q 042766 710 SNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIR---HRNLIKIITICSSTDFEGVDFKALVF 786 (914)
Q Consensus 710 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~~~~~~lv~ 786 (914)
.+.|+.|....+|+... ++..+++|+.... ....+..|++.++.+. ...+.++++++.. .+..++||
T Consensus 41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-----~g~~~lvm 110 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNS-----QGHSFLLL 110 (312)
T ss_dssp EEEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-----SSEEEEEE
T ss_pred eEEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-----CCceEEEE
Confidence 45789999999999875 3567888987532 3567889999998884 3567788877543 24689999
Q ss_pred ecccCCCHH--------HH---HhccCC--ccc--------------ccCCCHHHHH---HHHH----------------
Q 042766 787 EYMENGSLE--------DW---LHQSND--QVE--------------VRKLSLIQRM---NIAI---------------- 820 (914)
Q Consensus 787 e~~~~gsL~--------~~---l~~~~~--~~~--------------~~~~~~~~~~---~i~~---------------- 820 (914)
||++|..+. +. ++.... ... .-.-+|.... ++..
T Consensus 111 e~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~ 190 (312)
T 3jr1_A 111 EALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNID 190 (312)
T ss_dssp ECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHH
T ss_pred EeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHH
Confidence 999987541 11 222111 000 0012444321 1111
Q ss_pred HHHHHH-HHHHh-CCCCCcEecCCCCCCeeecCCCcEEEecccccccccccccc
Q 042766 821 DVASAI-EYLHH-HCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHLD 872 (914)
Q Consensus 821 ~i~~gl-~~LH~-~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~~ 872 (914)
+++..+ ..|.. ...|.+||+|+.+.|++++.++ +.|.||+ + .+.+...+
T Consensus 191 ~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~-~-~~g~~~~D 241 (312)
T 3jr1_A 191 LIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA-C-YWGDRECD 241 (312)
T ss_dssp HHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC-C-EEECTHHH
T ss_pred HHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc-c-ccCChHHH
Confidence 111111 23321 2257899999999999999887 8899984 3 35544433
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.34 E-value=0.001 Score=70.24 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=56.5
Q ss_pred cccccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCC---CCcceEEeEeecCCCCCCceE
Q 042766 706 EFSSSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRH---RNLIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 706 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~~~~~ 782 (914)
+....+.+|.|..+.||+.+.. +|+.|.+|+...........+..|++.|+.+.. -.+.+++++. ..
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---------~~ 85 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DR 85 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TT
T ss_pred CeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc---------Cc
Confidence 3455677899999999999886 677899998764444445678899999998842 2345665541 23
Q ss_pred eEEEecccCCC
Q 042766 783 ALVFEYMENGS 793 (914)
Q Consensus 783 ~lv~e~~~~gs 793 (914)
++||||++++.
T Consensus 86 ~lv~e~l~~~~ 96 (288)
T 3f7w_A 86 TLAMEWVDERP 96 (288)
T ss_dssp EEEEECCCCCC
T ss_pred eEEEEeecccC
Confidence 68999998764
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.22 E-value=0.00036 Score=63.73 Aligned_cols=62 Identities=21% Similarity=0.311 Sum_probs=46.0
Q ss_pred EEEeeccccc-ccCCcchhccCCCCEEEccCCccccccCccccccCCCCeEeCCCCccccccCCC
Q 042766 546 YLDISINSFY-GVIPLSFRFLKSIKALNVSSNNLSGKIPEFLENLSFLEFLNLSYNYFEGEVPVK 609 (914)
Q Consensus 546 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 609 (914)
.++.+++.++ ..+|..+ -++|+.|+|++|+|+...+..|..+++|+.|+|++|+|.|++...
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~ 74 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLV 74 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGH
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccH
Confidence 5677777775 2444332 246888888888888777778888888999999999998877653
No 431
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.18 E-value=0.00095 Score=70.96 Aligned_cols=72 Identities=10% Similarity=0.104 Sum_probs=43.9
Q ss_pred ccCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCc-ceEEeEeecCCCCCCceEeEEEe
Q 042766 709 SSNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNL-IKIITICSSTDFEGVDFKALVFE 787 (914)
Q Consensus 709 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~~~~~~lv~e 787 (914)
..+.|+.|....+|++ ..+++|+....... .....+|+.+++.+....+ .+++++.. +..++|+|
T Consensus 22 ~i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~-------~~~~~v~e 87 (301)
T 3dxq_A 22 GPLERLGGLTNLVFRA------GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDP-------ATGVMVTR 87 (301)
T ss_dssp SCEEEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT-------TTCCEEEE
T ss_pred ceeEcCCcccccccee------eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEEC-------CCCEEEEe
Confidence 3677889999999998 24788887533211 1223568888877743233 45655421 12368999
Q ss_pred cc-cCCCH
Q 042766 788 YM-ENGSL 794 (914)
Q Consensus 788 ~~-~~gsL 794 (914)
|+ +|.++
T Consensus 88 ~i~~g~~l 95 (301)
T 3dxq_A 88 YIAGAQTM 95 (301)
T ss_dssp CCTTCEEC
T ss_pred ecCCCccC
Confidence 99 66444
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.15 E-value=0.00076 Score=75.52 Aligned_cols=31 Identities=26% Similarity=0.478 Sum_probs=27.4
Q ss_pred CCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 834 QPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 834 ~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
.+.++|+|++|.||+++.++ ++++||+.+..
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 34899999999999998876 99999998864
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.88 E-value=0.0041 Score=66.66 Aligned_cols=169 Identities=14% Similarity=0.100 Sum_probs=88.9
Q ss_pred CccCHHHHHHHhhcccc-----cCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCC--cc
Q 042766 693 PMVSYAELSKATSEFSS-----SNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRN--LI 765 (914)
Q Consensus 693 ~~~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv 765 (914)
..++.+++......|.. .+.|+.|....+|+....+ + .+++|+.... ...+.+..|+++++.+.... +.
T Consensus 5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~-g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK-D-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESS-C-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCC
T ss_pred ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCC-c-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCC
Confidence 34555666666666654 2456778888999988643 3 5788988542 12345667888887774222 23
Q ss_pred eEEeEeecCC-CCCCceEeEEEecccCCCHH-----H------H---HhccC-Ccccc--cCC---CHHHHHH-------
Q 042766 766 KIITICSSTD-FEGVDFKALVFEYMENGSLE-----D------W---LHQSN-DQVEV--RKL---SLIQRMN------- 817 (914)
Q Consensus 766 ~l~~~~~~~~-~~~~~~~~lv~e~~~~gsL~-----~------~---l~~~~-~~~~~--~~~---~~~~~~~------- 817 (914)
+++....... .+..+..+++|+|++|..+. . . ++... ..... ... .|.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 3332100000 00123568999999986431 1 0 11110 00000 000 1111000
Q ss_pred -----HHHHHHHHHHHHHhC----CCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 818 -----IAIDVASAIEYLHHH----CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 818 -----i~~~i~~gl~~LH~~----~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
+...+...++++++. ..++++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 001234445555532 234799999999999999876668999998764
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.78 E-value=0.0085 Score=64.31 Aligned_cols=167 Identities=15% Similarity=0.132 Sum_probs=88.3
Q ss_pred CccCHHHHHHHhhcccc-----cCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCC--cc
Q 042766 693 PMVSYAELSKATSEFSS-----SNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRN--LI 765 (914)
Q Consensus 693 ~~~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv 765 (914)
...+.+.+......|.. ...++ |....||++... +|+.+++|+..... .....+..|..+++.+.... ++
T Consensus 9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp 85 (328)
T 1zyl_A 9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDE-DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVA 85 (328)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCT-TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBC
T ss_pred CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcC-CCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeec
Confidence 34455556555555533 23466 777899987654 45578899885332 23456778888888774222 34
Q ss_pred eEEeEeecCC-CCCCceEeEEEecccCCCHH-----HH---------Hhcc---CCcccccCCCHHHH----HH------
Q 042766 766 KIITICSSTD-FEGVDFKALVFEYMENGSLE-----DW---------LHQS---NDQVEVRKLSLIQR----MN------ 817 (914)
Q Consensus 766 ~l~~~~~~~~-~~~~~~~~lv~e~~~~gsL~-----~~---------l~~~---~~~~~~~~~~~~~~----~~------ 817 (914)
+++.. .... .+..+..++||||++|..+. .+ ++.. .........++... ..
T Consensus 86 ~~~~~-~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (328)
T 1zyl_A 86 APVAF-NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDAT 164 (328)
T ss_dssp CCCCB-TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCS
T ss_pred ceeec-CCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcC
Confidence 44432 1100 01134567899999875421 11 1110 00000011111110 00
Q ss_pred ---------HHHHHHHHHHHHHhC----CCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 818 ---------IAIDVASAIEYLHHH----CQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 818 ---------i~~~i~~gl~~LH~~----~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
+...+...++.+.+. ..+.++|+|+++.||+++ + .+.|+||+.+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 165 LIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 011111222333221 234689999999999998 5 899999988763
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.68 E-value=0.00027 Score=69.00 Aligned_cols=15 Identities=33% Similarity=0.496 Sum_probs=6.8
Q ss_pred CCCCcEEeccccccC
Q 042766 347 CSSLKVLSLSDNQFG 361 (914)
Q Consensus 347 l~~L~~L~Ls~N~l~ 361 (914)
-+.|+.|+|++|.|.
T Consensus 97 N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 97 SPSLRVLNVESNFLT 111 (197)
T ss_dssp CSSCCEEECCSSBCC
T ss_pred CCccCeEecCCCcCC
Confidence 344444444444443
No 436
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.65 E-value=0.0035 Score=70.12 Aligned_cols=73 Identities=19% Similarity=0.231 Sum_probs=48.8
Q ss_pred cCcccCCccEEEEEEEECC-------CcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCc-ceEEeEeecCCCCCCce
Q 042766 710 SNMIGQGRFGTVYKGILGD-------DEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNL-IKIITICSSTDFEGVDF 781 (914)
Q Consensus 710 ~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~~~~ 781 (914)
.+.|+.|....||++.... ++..|++|+.... ...+.+.+|..+++.+...++ .++++.+ .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~-----~~--- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIF-----SG--- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEE-----TT---
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEe-----CC---
Confidence 3567888889999998753 2467889987321 122556689999988853333 5666652 11
Q ss_pred EeEEEecccCCC
Q 042766 782 KALVFEYMENGS 793 (914)
Q Consensus 782 ~~lv~e~~~~gs 793 (914)
.+||||++|.+
T Consensus 148 -g~v~e~l~G~~ 158 (429)
T 1nw1_A 148 -GRLEEYIPSRP 158 (429)
T ss_dssp -EEEECCCCEEE
T ss_pred -CEEEEEeCCcc
Confidence 37999998743
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.61 E-value=0.0043 Score=67.80 Aligned_cols=144 Identities=13% Similarity=0.167 Sum_probs=81.6
Q ss_pred CcccCCccEEEEEEEECC-------CcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCC-cceEEeEeecCCCCCCceE
Q 042766 711 NMIGQGRFGTVYKGILGD-------DEMVVAVKVINLKQKGASKSFVSECEALRNIRHRN-LIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~~~~~ 782 (914)
+.+..|-...+|++.... +++.|++|+.... ........+|.++++.+.... ..++++++ ++
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~-----~~---- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVF-----PE---- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEE-----TT----
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEc-----CC----
Confidence 456678788899988742 3467888986322 223456678999998884222 35666653 21
Q ss_pred eEEEecccCCCHHH--------------HH---hccCCcccccCCC--HHHHHHHHHHHHH-------------------
Q 042766 783 ALVFEYMENGSLED--------------WL---HQSNDQVEVRKLS--LIQRMNIAIDVAS------------------- 824 (914)
Q Consensus 783 ~lv~e~~~~gsL~~--------------~l---~~~~~~~~~~~~~--~~~~~~i~~~i~~------------------- 824 (914)
.+||||++|.++.. .+ +....... .... +.+..++..++..
T Consensus 126 g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~-~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 204 (379)
T 3feg_A 126 GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFT-KEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKD 204 (379)
T ss_dssp EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSC-CSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHH
T ss_pred ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCC-CCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHH
Confidence 28999999855421 11 11110001 1111 3344444443321
Q ss_pred HHHHHHh----C-CCCCcEecCCCCCCeeecCC----CcEEEeccccccc
Q 042766 825 AIEYLHH----H-CQPPMVHGDLKPSNVLLDYD----MVAHVGDFGLAKF 865 (914)
Q Consensus 825 gl~~LH~----~-~~~~ivHrDlkp~NILl~~~----~~~ki~DFGla~~ 865 (914)
.+.++.+ . ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 205 ~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 205 EMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2333322 1 23478999999999999876 7899999998864
No 438
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.57 E-value=0.011 Score=66.51 Aligned_cols=75 Identities=15% Similarity=0.095 Sum_probs=47.9
Q ss_pred cCcccCCccEEEEEEEECCCcEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCCc-ceEEeEeecCCCCCCceEeEEEec
Q 042766 710 SNMIGQGRFGTVYKGILGDDEMVVAVKVINLKQKGASKSFVSECEALRNIRHRNL-IKIITICSSTDFEGVDFKALVFEY 788 (914)
Q Consensus 710 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~~~~~~lv~e~ 788 (914)
.+.|+.|-...+|++...+++..|++|+........ -...+|..+++.+...++ .++++++ .+ ..||||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~-----~~----G~v~e~ 182 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFF-----TN----GRIEEF 182 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEE-----TT----EEEEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEe-----CC----eEEEEe
Confidence 356788888999999886545788899874322111 122579999998865554 5666653 11 259999
Q ss_pred ccCCCH
Q 042766 789 MENGSL 794 (914)
Q Consensus 789 ~~~gsL 794 (914)
++|.++
T Consensus 183 I~G~~l 188 (458)
T 2qg7_A 183 MDGYAL 188 (458)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 987543
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.55 E-value=0.0023 Score=58.34 Aligned_cols=56 Identities=14% Similarity=0.274 Sum_probs=36.1
Q ss_pred eecccCCccc-cccCccccccccccEEEeecccccccCCcchhccCCCCEEEccCCccc
Q 042766 522 MLDISSNQFS-GVIPVTLSTCVSLEYLDISINSFYGVIPLSFRFLKSIKALNVSSNNLS 579 (914)
Q Consensus 522 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 579 (914)
.+|.+++.++ ..+|..+. .+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5566666665 23343322 35677777777777666677777777777777777765
No 440
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.38 E-value=0.023 Score=61.09 Aligned_cols=32 Identities=31% Similarity=0.295 Sum_probs=27.8
Q ss_pred CCCcEecCCCCCCeeecCC----CcEEEeccccccc
Q 042766 834 QPPMVHGDLKPSNVLLDYD----MVAHVGDFGLAKF 865 (914)
Q Consensus 834 ~~~ivHrDlkp~NILl~~~----~~~ki~DFGla~~ 865 (914)
.+.++|+|+.+.||+++.+ +.+.|+||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 4579999999999999875 6899999998864
No 441
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.32 E-value=0.00053 Score=66.97 Aligned_cols=89 Identities=13% Similarity=0.167 Sum_probs=52.2
Q ss_pred ccCCCCCcEEEcccCcccc----cCChhhhcccCCceeeeccccccccc----CccccCCCCCCeEEeeCCcC---CC--
Q 042766 393 IRNLVNLITFTLEVNQFHG----TIPDVISELKNLQQLSVFNNFLRGGI----PSGLGNLTKLGSLDLGSNSL---QG-- 459 (914)
Q Consensus 393 ~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l---~~-- 459 (914)
+..-+.|+.|+|++|+|.. .+...+..-+.|++|+|++|.|.+.- -.++..-+.|+.|+|++|.. ..
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g 145 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQV 145 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHH
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHH
Confidence 3444567777777777763 23344555677888888888776432 23344556688888876532 21
Q ss_pred --CCCCccCCCCCccccccCCCcc
Q 042766 460 --NIPSSLGNCQNLILFIASYNKL 481 (914)
Q Consensus 460 --~~p~~~~~l~~L~~L~l~~N~l 481 (914)
.+...+..-+.|+.|+++.|..
T Consensus 146 ~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 146 EMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHHHhCCCcCeEeccCCCc
Confidence 1233444556666666666554
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.11 E-value=0.0081 Score=65.73 Aligned_cols=73 Identities=11% Similarity=0.156 Sum_probs=43.1
Q ss_pred CcccCCccEEEEEEEECCC--------cEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCC-cceEEeEeecCCCCCCce
Q 042766 711 NMIGQGRFGTVYKGILGDD--------EMVVAVKVINLKQKGASKSFVSECEALRNIRHRN-LIKIITICSSTDFEGVDF 781 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~~~~ 781 (914)
+.++.|....+|++...+. +..+++|+...... .......|.++++.+...+ +.++++.. .
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~-----~---- 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF-----N---- 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE-----T----
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec-----C----
Confidence 4677788889999987531 25788888643221 1112467888888875333 34666542 1
Q ss_pred EeEEEecccCCC
Q 042766 782 KALVFEYMENGS 793 (914)
Q Consensus 782 ~~lv~e~~~~gs 793 (914)
.++||||++|.+
T Consensus 109 ~~~v~e~i~G~~ 120 (369)
T 3c5i_A 109 GGRIEEWLYGDP 120 (369)
T ss_dssp TEEEEECCCSEE
T ss_pred CcEEEEEecCCc
Confidence 257999998754
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.97 E-value=0.023 Score=61.18 Aligned_cols=31 Identities=19% Similarity=0.288 Sum_probs=27.9
Q ss_pred CCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 835 PPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 835 ~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999988764
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.63 E-value=0.039 Score=60.48 Aligned_cols=32 Identities=22% Similarity=0.277 Sum_probs=27.8
Q ss_pred CCCcEecCCCCCCeeecCC------CcEEEeccccccc
Q 042766 834 QPPMVHGDLKPSNVLLDYD------MVAHVGDFGLAKF 865 (914)
Q Consensus 834 ~~~ivHrDlkp~NILl~~~------~~~ki~DFGla~~ 865 (914)
...++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred CeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 3478999999999999887 7899999998864
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.98 E-value=0.11 Score=57.44 Aligned_cols=73 Identities=11% Similarity=0.109 Sum_probs=46.5
Q ss_pred CcccCCccEEEEEEEECCC-------cEEEEEEEeeccCCcchHHHHHHHHHHHhcCCCC-cceEEeEeecCCCCCCceE
Q 042766 711 NMIGQGRFGTVYKGILGDD-------EMVVAVKVINLKQKGASKSFVSECEALRNIRHRN-LIKIITICSSTDFEGVDFK 782 (914)
Q Consensus 711 ~~lg~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~~~~~ 782 (914)
+.+..|-...+|++..... +..|++|+...... ......+|.++++.+...+ ..++++.+ . .
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~-----~----~ 145 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADF-----P----E 145 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE-----T----T
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEc-----C----C
Confidence 4567788889999987521 46788888643221 1123357888888875323 34555532 1 2
Q ss_pred eEEEecccCCC
Q 042766 783 ALVFEYMENGS 793 (914)
Q Consensus 783 ~lv~e~~~~gs 793 (914)
+.||||++|.+
T Consensus 146 ~~I~efI~G~~ 156 (424)
T 3mes_A 146 GRIEEFIDGEP 156 (424)
T ss_dssp EEEEECCCSEE
T ss_pred CEEEEEeCCcc
Confidence 68999999865
No 446
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.53 E-value=1.2 Score=48.94 Aligned_cols=30 Identities=23% Similarity=0.371 Sum_probs=25.2
Q ss_pred CcEecCCCCCCeee------cCCCcEEEeccccccc
Q 042766 836 PMVHGDLKPSNVLL------DYDMVAHVGDFGLAKF 865 (914)
Q Consensus 836 ~ivHrDlkp~NILl------~~~~~~ki~DFGla~~ 865 (914)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4457899999998864
No 447
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=86.25 E-value=0.35 Score=47.37 Aligned_cols=93 Identities=17% Similarity=0.089 Sum_probs=60.1
Q ss_pred CCHHHHHhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccccccccc
Q 042766 792 GSLEDWLHQSNDQVEVRKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKFLSNHHL 871 (914)
Q Consensus 792 gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~~~~~~~ 871 (914)
-+|.+++...+ .++++.++|.++.|.+.++.-+-.+..+ ..+=+-|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~~-----~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~------- 97 (229)
T 2yle_A 33 LSLEEILRLYN-----QPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD------- 97 (229)
T ss_dssp EEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C----------
T ss_pred ccHHHHHHHcC-----CCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc-------
Confidence 37999998765 6899999999999999998776221111 1222346889999999987753 2111
Q ss_pred ccccCCCCccccccCcccccccchhh---hhhcccCcccccccc
Q 042766 872 DIASKTPSSSIGIKGTVGYVAPGKFF---MLYTHIPSFSCTNVH 912 (914)
Q Consensus 872 ~~~~~~~~~~~~~~GT~~y~APE~~~---~~~~Di~s~g~~~~~ 912 (914)
.....+.|||... ..+.-|+|+|.++|.
T Consensus 98 -------------~~~~~~~~pe~~~~~~te~~~IysLG~tLY~ 128 (229)
T 2yle_A 98 -------------AGEPPPVAGKLGYSQCMETEVIESLGIIIYK 128 (229)
T ss_dssp ----------------------CCSSSSSCHHHHHHHHHHHHHH
T ss_pred -------------ccccCCCChhhccccchHHHHHHHHHHHHHH
Confidence 0122466888875 577889999998874
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=79.57 E-value=0.19 Score=56.36 Aligned_cols=62 Identities=15% Similarity=0.062 Sum_probs=17.9
Q ss_pred ccCcccCCccEEEEEEEECCCcEEEEE------EEeeccC--CcchHHHHHHHHHHHhcCCCCcceEEeEeec
Q 042766 709 SSNMIGQGRFGTVYKGILGDDEMVVAV------KVINLKQ--KGASKSFVSECEALRNIRHRNLIKIITICSS 773 (914)
Q Consensus 709 ~~~~lg~G~~g~Vy~~~~~~~~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 773 (914)
..+.+| ||.||+|.+.....+||| |..+... ......+.+|..++++.+|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 345665 999999999765567888 6554221 2233568889999999999999999887543
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=57.51 E-value=14 Score=36.14 Aligned_cols=52 Identities=17% Similarity=0.241 Sum_probs=41.7
Q ss_pred CCCHHHHHHHHHHHHHHHH-HHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 809 KLSLIQRMNIAIDVASAIE-YLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 809 ~~~~~~~~~i~~~i~~gl~-~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
..+..++++++..++.... +++. -+|--+.|+||++|.++.++|.-.|+-..
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~f~~~~~p~i~hRGi~~~ 133 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLMFNRALEPFFLHVGVKES 133 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEEECTTCCEEESCCEETTT
T ss_pred hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEEEeCCCcEEEEEcCCccc
Confidence 4677888998888887666 5554 47778889999999999999998886543
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=47.27 E-value=12 Score=36.43 Aligned_cols=53 Identities=11% Similarity=0.174 Sum_probs=44.2
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEecCCCCCCeeecCCCcEEEeccccccc
Q 042766 808 RKLSLIQRMNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDYDMVAHVGDFGLAKF 865 (914)
Q Consensus 808 ~~~~~~~~~~i~~~i~~gl~~LH~~~~~~ivHrDlkp~NILl~~~~~~ki~DFGla~~ 865 (914)
...+...+++++..|+....+++.. +|=-+.|+||+++.++.+++.-.|+...
T Consensus 76 k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~f~~~~~p~i~~RGik~~ 128 (215)
T 4ann_A 76 KSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELFFTRDGLPIAKTRGLQNV 128 (215)
T ss_dssp GGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEEECTTSCEEESCCEETTT
T ss_pred HhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEEEcCCCCEEEEEccCccC
Confidence 4577889999999999888666644 7778899999999999999998887543
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=37.73 E-value=58 Score=27.25 Aligned_cols=45 Identities=13% Similarity=0.068 Sum_probs=24.7
Q ss_pred ccccCCccccCCCCCcEEEcccCcccccCChhhhcccCCceeeecc
Q 042766 385 ISGTIPPGIRNLVNLITFTLEVNQFHGTIPDVISELKNLQQLSVFN 430 (914)
Q Consensus 385 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 430 (914)
++.+-..+|.++++|+.+.+-.+ ++.+-..+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 44445556666666666666543 3334445555555555555543
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=32.30 E-value=47 Score=27.78 Aligned_cols=42 Identities=14% Similarity=-0.005 Sum_probs=21.1
Q ss_pred CCCCccccccccccccccCccCCccccccccccccccceeccC
Q 042766 285 SIPDSLSNASNLELLDLPSNQFKGKVSIDFSSLKNLWLLNLEQ 327 (914)
Q Consensus 285 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 327 (914)
+-..+|.++++|+.+.+-.+ ++.+...+|.++.+|+.+.+..
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33445555555555555443 3334455555555555555543
Done!