Query 042768
Match_columns 397
No_of_seqs 257 out of 1693
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 16:11:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042768.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042768hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 1.7E-65 5.6E-70 505.7 39.9 337 25-382 20-421 (448)
2 1rmg_A Rgase A, rhamnogalactur 100.0 1.8E-60 6.1E-65 468.2 39.6 331 29-386 17-356 (422)
3 1bhe_A PEHA, polygalacturonase 100.0 1.2E-59 4E-64 457.9 38.3 328 30-386 12-375 (376)
4 1czf_A Polygalacturonase II; b 100.0 1.5E-58 5.2E-63 445.5 34.0 321 31-385 28-358 (362)
5 2uvf_A Exopolygalacturonase; G 100.0 2E-56 6.8E-61 458.2 37.9 330 29-372 153-564 (608)
6 2iq7_A Endopolygalacturonase; 100.0 3E-56 1E-60 427.2 33.8 318 47-385 6-333 (339)
7 1nhc_A Polygalacturonase I; be 100.0 3.5E-56 1.2E-60 426.3 33.3 318 46-385 5-332 (336)
8 1hg8_A Endopolygalacturonase; 100.0 1.8E-55 6.2E-60 422.8 37.2 318 48-385 7-345 (349)
9 1ia5_A Polygalacturonase; glyc 100.0 1.7E-55 5.8E-60 421.7 35.3 315 48-385 11-335 (339)
10 1k5c_A Endopolygalacturonase; 100.0 5.7E-55 1.9E-59 416.4 24.4 309 49-385 8-329 (335)
11 2x6w_A Tail spike protein; vir 100.0 1.9E-48 6.6E-53 386.1 21.5 293 29-373 48-385 (600)
12 1x0c_A Isopullulanase; glycosi 100.0 3.1E-41 1.1E-45 339.8 18.7 303 33-371 143-520 (549)
13 3gq8_A Preneck appendage prote 100.0 3.9E-39 1.3E-43 321.2 26.1 269 29-343 19-308 (609)
14 1ogo_X Dextranase; hydrolase, 100.0 1.3E-38 4.5E-43 320.3 26.0 266 63-371 229-545 (574)
15 3gqn_A Preneck appendage prote 100.0 7.3E-39 2.5E-43 323.6 24.1 269 29-343 19-308 (772)
16 1h80_A IOTA-carrageenase; hydr 100.0 5.4E-38 1.9E-42 309.1 28.0 297 28-371 17-360 (464)
17 2vbk_A Tailspike-protein; vira 100.0 2.1E-32 7.3E-37 257.8 11.9 209 31-276 50-286 (514)
18 2pyg_A Poly(beta-D-mannuronate 100.0 5.5E-30 1.9E-34 249.9 27.0 304 32-372 2-360 (377)
19 3jur_A EXO-poly-alpha-D-galact 99.9 8.5E-24 2.9E-28 208.4 23.9 228 113-371 191-443 (448)
20 3eqn_A Glucan 1,3-beta-glucosi 99.9 1.1E-23 3.7E-28 213.4 21.5 262 31-341 48-327 (758)
21 1ia5_A Polygalacturonase; glyc 99.9 3.2E-20 1.1E-24 177.3 29.0 202 153-380 66-306 (339)
22 2uvf_A Exopolygalacturonase; G 99.9 1.1E-20 3.9E-25 193.5 27.7 247 113-394 332-607 (608)
23 2iq7_A Endopolygalacturonase; 99.9 7.1E-20 2.4E-24 175.0 29.1 202 153-380 62-304 (339)
24 1czf_A Polygalacturonase II; b 99.9 3.7E-20 1.3E-24 178.1 27.1 202 153-381 89-330 (362)
25 1nhc_A Polygalacturonase I; be 99.9 1.6E-19 5.3E-24 172.4 29.2 201 153-380 62-303 (336)
26 1bhe_A PEHA, polygalacturonase 99.8 1.1E-18 3.8E-23 169.3 28.6 218 90-344 110-364 (376)
27 1rmg_A Rgase A, rhamnogalactur 99.8 5.3E-18 1.8E-22 166.4 32.5 169 175-372 128-310 (422)
28 1hg8_A Endopolygalacturonase; 99.8 2.2E-18 7.6E-23 165.1 27.9 203 153-381 63-317 (349)
29 1k5c_A Endopolygalacturonase; 99.8 1.1E-18 3.9E-23 166.0 23.4 189 153-370 60-286 (335)
30 1ogo_X Dextranase; hydrolase, 99.8 1.2E-17 4.2E-22 168.1 22.5 235 64-344 263-546 (574)
31 1x0c_A Isopullulanase; glycosi 99.8 8.7E-18 3E-22 169.3 20.8 249 63-344 220-521 (549)
32 2inu_A Insulin fructotransfera 99.6 5.6E-15 1.9E-19 140.3 18.5 229 29-282 11-282 (410)
33 3gq8_A Preneck appendage prote 99.5 1.3E-11 4.3E-16 123.6 27.6 223 112-372 134-400 (609)
34 3gqn_A Preneck appendage prote 99.5 1.7E-11 5.8E-16 124.7 27.4 223 112-372 134-400 (772)
35 1h80_A IOTA-carrageenase; hydr 99.5 1.8E-12 6.1E-17 127.7 17.8 159 157-353 106-279 (464)
36 1ru4_A Pectate lyase, PEL9A; p 99.4 9.7E-12 3.3E-16 120.7 20.8 250 25-312 9-299 (400)
37 2pyg_A Poly(beta-D-mannuronate 99.4 3.5E-11 1.2E-15 116.7 21.4 167 119-306 132-334 (377)
38 3eqn_A Glucan 1,3-beta-glucosi 99.4 1.1E-11 3.6E-16 126.2 15.8 94 30-131 398-498 (758)
39 1dbg_A Chondroitinase B; beta 99.3 6E-11 2E-15 117.9 20.6 178 48-246 30-241 (506)
40 2x6w_A Tail spike protein; vir 99.3 5.4E-11 1.9E-15 118.5 16.3 226 90-368 151-408 (600)
41 3uw0_A Pectinesterase; right-h 98.9 4.2E-08 1.5E-12 93.4 15.9 150 47-243 42-218 (364)
42 1pcl_A Pectate lyase E; lyase 98.8 3.6E-07 1.2E-11 86.9 20.7 76 200-275 132-227 (355)
43 1pxz_A Major pollen allergen J 98.7 4.4E-07 1.5E-11 86.1 16.1 114 154-275 108-226 (346)
44 3zsc_A Pectate trisaccharide-l 98.7 1.2E-06 4E-11 82.5 18.1 76 200-275 115-194 (340)
45 2qy1_A Pectate lyase II; GAG l 98.6 9.4E-07 3.2E-11 83.4 17.2 93 181-274 93-203 (330)
46 1idk_A Pectin lyase A; signal, 98.6 4.9E-07 1.7E-11 86.1 15.3 90 177-275 126-233 (359)
47 3vmv_A Pectate lyase; polysacc 98.6 2.4E-06 8.2E-11 80.1 19.5 139 178-339 98-249 (326)
48 3zsc_A Pectate trisaccharide-l 98.6 2.7E-06 9.1E-11 80.1 18.9 135 152-307 83-251 (340)
49 1qcx_A Pectin lyase B; beta-he 98.6 1.8E-06 6.1E-11 82.3 17.9 63 181-243 131-197 (359)
50 1air_A Pectate lyase C, PELC; 98.6 8.4E-07 2.9E-11 84.3 15.5 13 47-59 24-36 (353)
51 1pxz_A Major pollen allergen J 98.6 8.9E-07 3E-11 84.0 15.5 64 174-242 150-222 (346)
52 1gq8_A Pectinesterase; hydrola 98.6 1.5E-06 5.1E-11 81.5 16.0 200 48-305 18-243 (319)
53 1xg2_A Pectinesterase 1; prote 98.6 1.3E-06 4.5E-11 81.8 15.4 200 48-305 14-239 (317)
54 2qy1_A Pectate lyase II; GAG l 98.5 2.2E-06 7.6E-11 80.8 15.8 168 108-310 59-254 (330)
55 1air_A Pectate lyase C, PELC; 98.5 2.4E-06 8E-11 81.2 15.7 97 175-275 103-215 (353)
56 1vbl_A Pectate lyase 47; PL 47 98.5 1.8E-06 6.2E-11 83.6 13.5 100 176-275 149-282 (416)
57 2x3h_A K5 lyase, K5A lyase; ba 98.4 0.00017 5.7E-09 65.2 24.5 230 30-298 62-309 (542)
58 2nsp_A Pectinesterase A; micha 98.3 1.7E-05 5.7E-10 75.1 15.6 42 48-97 17-61 (342)
59 1pe9_A Pectate lyase A; parall 98.3 9.9E-06 3.4E-10 77.0 13.6 96 180-275 111-238 (361)
60 2o04_A Pectate lyase, PL; hexa 98.3 4E-06 1.4E-10 80.8 10.7 100 175-275 143-276 (399)
61 1idk_A Pectin lyase A; signal, 98.2 2.3E-05 7.9E-10 74.5 15.4 136 153-310 125-284 (359)
62 2inu_A Insulin fructotransfera 98.1 5.2E-05 1.8E-09 72.2 15.4 111 160-284 136-262 (410)
63 1qcx_A Pectin lyase B; beta-he 98.1 7.1E-05 2.4E-09 71.2 16.5 135 153-309 125-283 (359)
64 1pe9_A Pectate lyase A; parall 98.0 9.8E-05 3.3E-09 70.2 14.8 111 154-274 105-259 (361)
65 3vmv_A Pectate lyase; polysacc 98.0 0.00051 1.8E-08 64.2 19.4 118 154-281 97-233 (326)
66 1vbl_A Pectate lyase 47; PL 47 98.0 5.8E-05 2E-09 73.0 12.5 113 153-275 149-304 (416)
67 1pcl_A Pectate lyase E; lyase 97.9 0.00036 1.2E-08 66.2 15.5 113 153-275 97-249 (355)
68 2o04_A Pectate lyase, PL; hexa 97.6 0.00039 1.3E-08 66.9 12.2 112 153-275 144-298 (399)
69 3grh_A YBHC, acyl-COA thioeste 97.5 0.0054 1.8E-07 58.9 17.4 47 48-97 88-136 (422)
70 1ru4_A Pectate lyase, PEL9A; p 97.4 0.00068 2.3E-08 65.5 10.5 110 153-276 109-231 (400)
71 2vbk_A Tailspike-protein; vira 97.0 0.0023 7.8E-08 61.2 9.0 71 153-246 197-286 (514)
72 3t9g_A Pectate lyase; PL3, par 96.4 0.13 4.5E-06 43.4 14.8 106 184-309 53-161 (196)
73 1gq8_A Pectinesterase; hydrola 96.3 0.021 7.3E-07 53.2 10.6 113 181-306 92-210 (319)
74 1dbg_A Chondroitinase B; beta 96.3 0.025 8.6E-07 56.1 11.4 142 158-306 226-392 (506)
75 1xg2_A Pectinesterase 1; prote 96.2 0.022 7.4E-07 53.1 9.9 113 181-306 88-206 (317)
76 1ee6_A Pectate lyase; parallel 96.0 0.42 1.4E-05 40.5 15.7 77 160-242 48-124 (197)
77 3t9g_A Pectate lyase; PL3, par 95.8 0.6 2E-05 39.4 15.8 132 159-306 51-182 (196)
78 3b4n_A Endo-pectate lyase; pec 95.6 0.56 1.9E-05 43.1 16.1 68 122-194 124-191 (344)
79 3uw0_A Pectinesterase; right-h 95.4 0.2 6.7E-06 47.5 13.0 114 180-305 119-255 (364)
80 1ee6_A Pectate lyase; parallel 95.3 0.35 1.2E-05 40.9 12.7 110 183-312 48-160 (197)
81 2nsp_A Pectinesterase A; micha 95.3 0.15 5E-06 48.0 11.5 85 208-305 138-230 (342)
82 3b4n_A Endo-pectate lyase; pec 89.1 3.9 0.00013 37.6 11.3 54 184-244 159-213 (344)
83 3ju4_A Endo-N-acetylneuraminid 87.9 0.2 6.9E-06 47.4 2.1 38 38-79 4-42 (670)
84 3grh_A YBHC, acyl-COA thioeste 84.3 30 0.001 33.1 15.2 137 155-305 196-362 (422)
85 3riq_A Tailspike protein; righ 80.5 20 0.00069 33.8 11.8 35 233-270 308-342 (543)
86 2vfm_A Bifunctional tail prote 79.1 18 0.00063 33.4 10.9 81 209-305 269-373 (559)
87 2v5i_A Salmonella typhimurium 78.5 18 0.00063 33.4 10.7 81 209-305 272-376 (559)
88 2xc1_A Bifunctional tail prote 73.8 28 0.00096 33.6 10.9 81 209-305 376-480 (666)
89 2vfm_A Bifunctional tail prote 72.1 62 0.0021 29.9 15.4 68 232-302 269-353 (559)
90 2xc1_A Bifunctional tail prote 69.8 82 0.0028 30.4 15.2 68 232-302 376-460 (666)
91 2v5i_A Salmonella typhimurium 64.9 88 0.003 28.9 15.1 68 232-302 272-356 (559)
92 2zzv_A ABC transporter, solute 53.2 11 0.00037 35.2 4.1 11 1-11 1-11 (361)
93 3bh7_B Protein XRP2; protein-p 33.6 2.1E+02 0.0072 26.5 9.4 11 154-164 64-74 (352)
94 3riq_A Tailspike protein; righ 31.3 2.2E+02 0.0076 26.9 8.9 89 210-304 308-411 (543)
95 2yuh_A Tubulin-specific chaper 28.8 70 0.0024 26.5 4.8 11 154-164 71-81 (179)
96 2w7z_A EFSQNR, pentapeptide re 26.6 2.3E+02 0.0077 23.6 8.0 11 293-303 153-163 (214)
97 3bh7_B Protein XRP2; protein-p 20.3 2.1E+02 0.0071 26.5 6.7 10 154-163 83-92 (352)
98 3o0r_C Nitric oxide reductase 20.3 52 0.0018 25.7 2.3 8 1-8 1-8 (146)
99 1njh_A Protein YOJF; structura 20.2 2.5E+02 0.0085 21.4 5.8 70 48-127 8-91 (119)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=1.7e-65 Score=505.71 Aligned_cols=337 Identities=23% Similarity=0.386 Sum_probs=298.6
Q ss_pred ccccCceeEEeeccCccCCCccchHHHHHHHHHHHhhcCCCcEEEEcCcEEEecceeecCCCCCcceEEEEccEEEeecc
Q 042768 25 SSYATTTTYNVLSFGAKGNGVTDSTQAFAKAWAAACASTESATLYVPKGRYLLGSVAFNGDCKSSDITFRIDGTLVAPAD 104 (397)
Q Consensus 25 ~~~a~~~~~~v~dfGA~~dg~tddt~aiq~Ai~~ac~~~~g~~v~~p~G~Y~~~~l~l~~~~~s~~v~l~~~G~l~~~~~ 104 (397)
.+..++.+++|+||||+|||.+|||+|||+||+ +|++.+|++|+||+|+|+++++.|+ | +++|+++|+|+++++
T Consensus 20 ~p~~~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~-~c~~~ggg~v~vP~G~yl~~~l~l~----s-~v~l~l~gtL~~s~d 93 (448)
T 3jur_A 20 EPQIPDREVNLLDFGARGDGRTDCSESFKRAIE-ELSKQGGGRLIVPEGVFLTGPIHLK----S-NIELHVKGTIKFIPD 93 (448)
T ss_dssp CCCCCSCEEEGGGGTCCCEEEEECHHHHHHHHH-HHHHHTCEEEEECSSEEEESCEECC----T-TEEEEESSEEEECCC
T ss_pred CCCCCCcEEEEEecccCCCCCeecHHHHHHHHH-hhhhcCCeEEEECCCcEEEeeeEeC----C-CcEEEEEEEEEecCC
Confidence 444567799999999999999999999999997 5787789999999999999999997 6 999999999999999
Q ss_pred cccc-CCC------------cceEEEEeeeceEEec-cEEecCC--CcccccccC-------------------------
Q 042768 105 YRVL-GQA------------DNWLSFEGVSGVSIIG-GALDAKG--SSLWACKAS------------------------- 143 (397)
Q Consensus 105 ~~~~-~~~------------~~~i~~~~~~nv~I~G-G~idg~g--~~~w~~~~~------------------------- 143 (397)
+.+| +.. .+||.+.+++||+|+| |+|||+| +.||.....
T Consensus 94 ~~~y~p~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 173 (448)
T 3jur_A 94 PERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAER 173 (448)
T ss_dssp GGGGCSCEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHHHHH
T ss_pred HHHhCcccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhhhhhhhcc
Confidence 9888 321 3689999999999999 9999999 889974321
Q ss_pred ---------CCCCCCCceeEEEEccCCeEEEeeeEecCcceEEEEeceecEEEEeEEEECCCCCCCCCcceeeceeeEEE
Q 042768 144 ---------GTNCPDGATTLSFTNSNNIRINGLLSLNSQMFHIVINGCKDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKI 214 (397)
Q Consensus 144 ---------~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~~~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I 214 (397)
+.....||++|.|.+|+|++|+++++.++|.|++++..|+|++|+|++|.++ ++|+|||++.+|+||+|
T Consensus 174 ~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV~I 251 (448)
T 3jur_A 174 GTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLI 251 (448)
T ss_dssp TCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEEEE
T ss_pred cCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCEEE
Confidence 0123478999999999999999999999999999999999999999999997 68999999999999999
Q ss_pred EecEEecCCeeEEeCCC-----------CeeEEEEeeEE--eCCC-eEEEeeccccCCcCcEEEEEEEeeEEECCcceEE
Q 042768 215 TNCTIKTGDDCIPIGPG-----------TKNLWIERVTC--GPGH-GISIGSLAKDLVEEGVQNVTVFKTVFTGTTNGFR 280 (397)
Q Consensus 215 ~n~~i~~~dD~i~i~~~-----------~~ni~i~n~~~--~~~~-gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~gi~ 280 (397)
+||+|.++||||+++++ ++||+|+||+| ..+| |++|||+ ..++++||+|+||++.++.+|++
T Consensus 252 ~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~----~~~~v~nV~v~n~~~~~t~~Gir 327 (448)
T 3jur_A 252 EKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE----MSGGVRNVVARNNVYMNVERALR 327 (448)
T ss_dssp ESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSS----CTTCEEEEEEESCEEESCSEEEE
T ss_pred EeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCc----ccCcEEEEEEEEEEEecccceEE
Confidence 99999999999999997 79999999999 5677 7999998 45789999999999999999999
Q ss_pred EEeecCCCCceEEcEEEEeeeeccCcccE-EEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeecCCceEEEecCCCCce
Q 042768 281 IKSWARPSNGFVQGVRFIDAVMRNVQFPI-VIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTSATPIAIKFDCSPKYPC 359 (397)
Q Consensus 281 i~s~~~~~~g~v~nI~~~ni~~~~~~~~i-~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~~~~~~i 359 (397)
||++.+ ++|.|+||+|+|++|+++.+|+ .|++.|+.. + ....+.|+||+|+||+++. ...++.+.|.++.||
T Consensus 328 IKt~~g-~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~---~--~~~~~~i~nI~~~NI~~t~-~~~~i~i~g~~~~p~ 400 (448)
T 3jur_A 328 LKTNSR-RGGYMENIFFIDNVAVNVSEEVIRINLRYDNE---E--GEYLPVVRSVFVKNLKATG-GKYAVRIEGLENDYV 400 (448)
T ss_dssp EECCTT-TCSEEEEEEEESCEEEEESSEEEEEESCGGGC---C--CSCCCEEEEEEEESCEEEE-CSEEEEEECBTTBCE
T ss_pred EEEEcC-CCceEeeEEEEEEEEECCccccEEEEeeccCC---C--CCCCceEEEEEEEeEEEEe-cceEEEEEeCCCCCE
Confidence 999987 7899999999999999999988 999998753 1 2235689999999999998 557999999999999
Q ss_pred ecEEEEeEEEEeCCccccceeec
Q 042768 360 QGIRLQNINLRHLKQEAQSSCNN 382 (397)
Q Consensus 360 ~~i~~~nv~i~~~~~~~~~~c~n 382 (397)
+||+|+||+++.... ...|.+
T Consensus 401 ~~I~~~nv~i~~~~~--~~~~~~ 421 (448)
T 3jur_A 401 KDILISDTIIEGAKI--SVLLEF 421 (448)
T ss_dssp EEEEEEEEEEESCSE--EEEEEE
T ss_pred eeEEEEEEEEEcccc--ceeEec
Confidence 999999999986432 244555
No 2
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=1.8e-60 Score=468.24 Aligned_cols=331 Identities=24% Similarity=0.441 Sum_probs=288.9
Q ss_pred CceeEEeeccCccCCCccchHHHHHHHHHHHhhcCCCcEEEEcCcEEEecc-eeecCCCCCcceEEEEccEEEeeccccc
Q 042768 29 TTTTYNVLSFGAKGNGVTDSTQAFAKAWAAACASTESATLYVPKGRYLLGS-VAFNGDCKSSDITFRIDGTLVAPADYRV 107 (397)
Q Consensus 29 ~~~~~~v~dfGA~~dg~tddt~aiq~Ai~~ac~~~~g~~v~~p~G~Y~~~~-l~l~~~~~s~~v~l~~~G~l~~~~~~~~ 107 (397)
+.+.++|++|||++||++|||+|||+||+ +|+ +|++|+||+|+|++++ +.|+++ + +++|+++|+++...+..
T Consensus 17 ~~~~~~V~~~GA~~dg~tddT~Aiq~Ai~-ac~--~g~~V~vP~G~Yli~~~l~l~g~--s-~v~l~l~G~~l~~~~~~- 89 (422)
T 1rmg_A 17 ATKTCNILSYGAVADNSTDVGPAITSAWA-ACK--SGGLVYIPSGNYALNTWVTLTGG--S-ATAIQLDGIIYRTGTAS- 89 (422)
T ss_dssp HHCEEEGGGGTCCCSSSSBCHHHHHHHHH-HHT--BTCEEEECSSEEEECSCEEEESC--E-EEEEEECSEEEECCCCS-
T ss_pred CCcEEEeeeccccCCCCcccHHHHHHHHH-HCC--CCCEEEECCCeEEeCCceeecCC--C-eEEEEEcCcEEcccCCC-
Confidence 35689999999999999999999999997 565 4889999999999986 999875 6 89999999887754321
Q ss_pred cCCCcceEE---EEeeeceEEec-cEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcceEEEEecee
Q 042768 108 LGQADNWLS---FEGVSGVSIIG-GALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQMFHIVINGCK 183 (397)
Q Consensus 108 ~~~~~~~i~---~~~~~nv~I~G-G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~~~i~~~~~~ 183 (397)
+.|+. ..++++++|.| |+|||+|+.||... ..||++|++.+|+|++|+++++.+++.|++++..|+
T Consensus 90 ----~~~~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~~------~~rp~~i~~~~~~nv~I~~iti~nsp~~~i~i~~~~ 159 (422)
T 1rmg_A 90 ----GNMIAVTDTTDFELFSSTSKGAVQGFGYVYHAEG------TYGARILRLTDVTHFSVHDIILVDAPAFHFTMDTCS 159 (422)
T ss_dssp ----SEEEEEEEEEEEEEECSSSCCEEECCTHHHHTTT------CCCCEEEEEEEEEEEEEEEEEEECCSSCSEEEEEEE
T ss_pred ----CceEEEEecCceeEEeeccCEEEECCcchhhcCC------CCCceEEEEcccceEEEECeEEECCCceEEEEeCcC
Confidence 33444 45556667779 99999999999531 238999999999999999999999999999999999
Q ss_pred cEEEEeEEEECCCCCCCCCcceeeceeeEEEEecEEecCCeeEEeCCCCeeEEEEeeEEeCCCeEEEeeccccCCcCcEE
Q 042768 184 DVHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLVEEGVQ 263 (397)
Q Consensus 184 ~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~~~~~~~~~v~ 263 (397)
|++|+|++|.+ .+++++|||++.+ +||+|+||+|.++||||+++++++||+|+||+|..+||++|||++++ +.++
T Consensus 160 nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~~~nI~I~n~~~~~~~GisIGS~g~~---~~v~ 234 (422)
T 1rmg_A 160 DGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSPANNILVESIYCNWSGGCAMGSLGAD---TDVT 234 (422)
T ss_dssp EEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEEEEEEEEEEEEEESSSEEEEEEECTT---EEEE
T ss_pred CEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCCCcCEEEEeEEEcCCcceeecccCCC---CcEE
Confidence 99999999999 4557999999999 99999999999999999999999999999999999999999998643 4799
Q ss_pred EEEEEeeEEECCcceEEEEeecCCCCceEEcEEEEeeeeccCcccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEee
Q 042768 264 NVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFIDAVMRNVQFPIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTS 343 (397)
Q Consensus 264 ni~i~n~~~~~~~~gi~i~s~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~ 343 (397)
||+|+||+|.++.+|++||++.+ .|.++||+|+|++|+++..||.|.+.|+... .......+|+||+|+||+++.
T Consensus 235 nV~v~n~~~~~~~~Gi~Ikt~~g--~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~~---~~~~~~~~i~nI~~~nI~gt~ 309 (422)
T 1rmg_A 235 DIVYRNVYTWSSNQMYMIKSNGG--SGTVSNVLLENFIGHGNAYSLDIDGYWSSMT---AVAGDGVQLNNITVKNWKGTE 309 (422)
T ss_dssp EEEEEEEEEESSSCSEEEEEBBC--CEEEEEEEEEEEEEEEESCSEEEETBCTTSC---CBSSSCCEEEEEEEEEEEEEE
T ss_pred EEEEEeEEEeccceEEEEEecCC--CcEEEEEEEEeEEEECccccEEEEeeccCCC---cccCCCceEEEEEEEeEEEEe
Confidence 99999999999999999999743 5899999999999999999999999886531 123456799999999999987
Q ss_pred cC---CceEEEecCCCCceecEEEEeEEEEeCC-ccccceeeccccc
Q 042768 344 AT---PIAIKFDCSPKYPCQGIRLQNINLRHLK-QEAQSSCNNVIGK 386 (397)
Q Consensus 344 ~~---~~~~~i~~~~~~~i~~i~~~nv~i~~~~-~~~~~~c~n~~~~ 386 (397)
.. ..++.+.|.++.+|+||+|+||+|..++ +...+.|+|+++.
T Consensus 310 ~~g~~~~~i~i~~~~~~~~~ni~l~nv~i~~~~g~~~~~~C~n~~g~ 356 (422)
T 1rmg_A 310 ANGATRPPIRVVCSDTAPCTDLTLEDIAIWTESGSSELYLCRSAYGS 356 (422)
T ss_dssp SCTTTSCSEEEECBTTBCEEEEEEEEEEEEESSSSCEEEEEESEEEE
T ss_pred cccccceeEEEEeCCCCcEeeEEEEeEEEEcCCCCccceEEECCCcc
Confidence 53 4589999999999999999999999876 4567999999875
No 3
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=1.2e-59 Score=457.90 Aligned_cols=328 Identities=29% Similarity=0.426 Sum_probs=289.0
Q ss_pred ceeEEeeccCccCCCccchHHHHHHHHHHHhhcCCCcEEEEcC---cEEEecceeecCCCCCcceEEEEcc--EEEeecc
Q 042768 30 TTTYNVLSFGAKGNGVTDSTQAFAKAWAAACASTESATLYVPK---GRYLLGSVAFNGDCKSSDITFRIDG--TLVAPAD 104 (397)
Q Consensus 30 ~~~~~v~dfGA~~dg~tddt~aiq~Ai~~ac~~~~g~~v~~p~---G~Y~~~~l~l~~~~~s~~v~l~~~G--~l~~~~~ 104 (397)
+.+++|++|| .+|||+|||+||+ +|++ |++|+||+ |+|+++++.|+ | +++|++++ +|+++.+
T Consensus 12 p~~~~v~~~G-----~~~dT~aiq~Ai~-ac~~--Gg~v~~~~~~~g~yl~g~i~l~----s-~vtL~l~~Ga~L~~s~~ 78 (376)
T 1bhe_A 12 PSSCTTLKAD-----SSTATSTIQKALN-NCDQ--GKAVRLSAGSTSVFLSGPLSLP----S-GVSLLIDKGVTLRAVNN 78 (376)
T ss_dssp CCEEEEEECC-----SSBCHHHHHHHHT-TCCT--TCEEEEECSSSSEEEESCEECC----T-TCEEEECTTCEEEECSC
T ss_pred CCeEEECCCC-----CCccHHHHHHHHH-Hhcc--CCcEEEECCCCceEEEeEEEEC----C-CCEEEECCCeEEEeCCC
Confidence 4579999986 4899999999997 6664 56777765 79999999998 6 99999995 9999998
Q ss_pred ccccCCC--------------cceEEEEeeeceEEec-cEEecCC--------CcccccccC---CCCCCCCceeEEEEc
Q 042768 105 YRVLGQA--------------DNWLSFEGVSGVSIIG-GALDAKG--------SSLWACKAS---GTNCPDGATTLSFTN 158 (397)
Q Consensus 105 ~~~~~~~--------------~~~i~~~~~~nv~I~G-G~idg~g--------~~~w~~~~~---~~~~~~~~~~i~~~~ 158 (397)
+.+|+.. .+||.+.+++||+|.| |+|||+| +.||+.... ......||++|.|.+
T Consensus 79 ~~~y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~ 158 (376)
T 1bhe_A 79 AKSFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINK 158 (376)
T ss_dssp SGGGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEES
T ss_pred HHHCcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEc
Confidence 8888642 4789999999999999 9999998 578864210 012245899999999
Q ss_pred cCCeEEEeeeEecCcceEEEEeceecEEEEeEEEECCCCCCCCCcceeeceeeEEEEecEEecCCeeEEeCC-----CCe
Q 042768 159 SNNIRINGLLSLNSQMFHIVINGCKDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKTGDDCIPIGP-----GTK 233 (397)
Q Consensus 159 ~~nv~I~~v~i~~~~~~~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~-----~~~ 233 (397)
|+|++|+++++.++|.|++++..|++++|+|++|.++.+++|+|||++.+|+||+|+||+|.++||||++++ +++
T Consensus 159 ~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~~~~~s~ 238 (376)
T 1bhe_A 159 SKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETR 238 (376)
T ss_dssp CEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTTSCCEE
T ss_pred ceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccCCCCCce
Confidence 999999999999999999999999999999999999988899999999999999999999999999999995 699
Q ss_pred eEEEEeeEEeCCCeEEEeeccccCCcCcEEEEEEEeeEEECCcceEEEEeecCCCCceEEcEEEEeeeeccCcccEEEEe
Q 042768 234 NLWIERVTCGPGHGISIGSLAKDLVEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFIDAVMRNVQFPIVIDQ 313 (397)
Q Consensus 234 ni~i~n~~~~~~~gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~ 313 (397)
||+|+||+|..+||++|||+. . +++||+|+||+|.++.+|++||++++ ++|.|+||+|+|++|+++.+||.|++
T Consensus 239 nI~I~n~~~~~ghGisiGSe~----~-~v~nV~v~n~~~~~t~~GirIKt~~g-~~G~v~ni~f~ni~~~~v~~~i~i~~ 312 (376)
T 1bhe_A 239 NISILHNDFGTGHGMSIGSET----M-GVYNVTVDDLKMNGTTNGLRIKSDKS-AAGVVNGVRYSNVVMKNVAKPIVIDT 312 (376)
T ss_dssp EEEEEEEEECSSSCEEEEEEE----S-SEEEEEEEEEEEESCSEEEEEECCTT-TCCEEEEEEEEEEEEESCSEEEEEET
T ss_pred EEEEEeeEEEccccEEeccCC----c-cEeeEEEEeeEEeCCCcEEEEEEecC-CCceEeeEEEEeEEEeCCCceEEEEe
Confidence 999999999999999999983 3 89999999999999999999999987 88999999999999999999999999
Q ss_pred ecCCCCCCCCCCCcceEEEeEEEEeEEEeecCCceEEEecCCCCceecEEEEeEEEEeCCccccceeeccccc
Q 042768 314 NYCPHNLNCPGQVSGVKISDVIYQDIRGTSATPIAIKFDCSPKYPCQGIRLQNINLRHLKQEAQSSCNNVIGK 386 (397)
Q Consensus 314 ~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~~~~~~i~~i~~~nv~i~~~~~~~~~~c~n~~~~ 386 (397)
.|++.. ....+.|+||+|+||+++... ++.+.|.++.||++|+|+||++... ..+.|+||...
T Consensus 313 ~y~~~~-----~~~~~~i~ni~~~ni~gt~~~--~~~l~g~~~~~~~~I~l~nv~l~~~---~~~~~~~~~~~ 375 (376)
T 1bhe_A 313 VYEKKE-----GSNVPDWSDITFKDVTSETKG--VVVLNGENAKKPIEVTMKNVKLTSD---STWQIKNVNVK 375 (376)
T ss_dssp TSSCCC-----CCCCCEEEEEEEEEEEECSCC--EEEEECTTCSSCEEEEEEEEECCTT---CEEEEESEEEE
T ss_pred eccCCC-----CCcCcEEEEEEEEEEEEEecc--eEEEEeCCCCCeeeEEEEeEEEecC---CCceEEEEEec
Confidence 987631 223468999999999999764 7899999999999999999999865 46999999753
No 4
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=1.5e-58 Score=445.51 Aligned_cols=321 Identities=22% Similarity=0.405 Sum_probs=278.3
Q ss_pred eeEEeeccCccCCCccchHHHHHHHHHHHhhcCCCcEEEEcCcEEEecce-eecCCCCCcceEEEEccEEEeeccccccC
Q 042768 31 TTYNVLSFGAKGNGVTDSTQAFAKAWAAACASTESATLYVPKGRYLLGSV-AFNGDCKSSDITFRIDGTLVAPADYRVLG 109 (397)
Q Consensus 31 ~~~~v~dfGA~~dg~tddt~aiq~Ai~~ac~~~~g~~v~~p~G~Y~~~~l-~l~~~~~s~~v~l~~~G~l~~~~~~~~~~ 109 (397)
.+++|++ ++|||+|++ +|++.++++|+||+|+|+. + .|+ + +++|+++|++.+ ++..|.
T Consensus 28 ~~Ctv~~-----------~~aiq~ai~-~c~~~~g~~v~vP~G~~l~--l~~l~----~-~~~l~~~g~~~~--~~~~w~ 86 (362)
T 1czf_A 28 DSCTFTT-----------AAAAKAGKA-KCSTITLNNIEVPAGTTLD--LTGLT----S-GTKVIFEGTTTF--QYEEWA 86 (362)
T ss_dssp CEEEESS-----------HHHHHHHGG-GCSEEEEESCEECTTCCEE--ECSCC----T-TCEEEEESEEEE--CCCCSC
T ss_pred CEEEECC-----------HHHHHHHHH-HhhccCCCEEEECCCEEEE--eeccC----C-CeEEEEeCcEEe--ccccCC
Confidence 5678755 789999995 5787788999999999973 3 444 5 899999998876 345565
Q ss_pred CCcceEEEEeeeceEEec---cEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcceEEEEeceecEE
Q 042768 110 QADNWLSFEGVSGVSIIG---GALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQMFHIVINGCKDVH 186 (397)
Q Consensus 110 ~~~~~i~~~~~~nv~I~G---G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~~~i~~~~~~~v~ 186 (397)
++|+.+. .+||+|.| |+|||+|+.||+.... ....||+++++.+|+|++|++++++++|.|++++. |+|++
T Consensus 87 --g~~i~~~-~~nv~I~G~~~g~IdG~G~~~w~~~~~--~~~~rP~~i~~~~~~nv~i~~iti~nsp~~~i~i~-~~nv~ 160 (362)
T 1czf_A 87 --GPLISMS-GEHITVTGASGHLINCDGARWWDGKGT--SGKKKPKFFYAHGLDSSSITGLNIKNTPLMAFSVQ-ANDIT 160 (362)
T ss_dssp --CCSEEEE-EESCEEEECTTCEEECCGGGTCCSCTT--SSSCCCCCEEEEEEETEEEESCEEECCSSCCEEEE-CSSEE
T ss_pred --CcEEEEe-CccEEEEcCCCcEEECCCchhhcccCC--CCCCCCeEEEEeecccEEEEEEEEecCCccEEEEe-eCCEE
Confidence 4788886 59999999 8999999999985432 35678999999999999999999999999999999 99999
Q ss_pred EEeEEEECCC-C---CCCCCcceeeceeeEEEEecEEecCCeeEEeCCCCeeEEEEeeEEeCCCeEEEeeccccCCcCcE
Q 042768 187 VEGVTVIAPG-N---SPNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLVEEGV 262 (397)
Q Consensus 187 i~n~~i~~~~-~---~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~~~~~~~~~v 262 (397)
|+|++|.++. + ++|+||||+.+|+||+|+||++.++||||++++ .+||+|+||+|.++||++|||+|.+ ..+.+
T Consensus 161 i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~~~~v 238 (362)
T 1czf_A 161 FTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNS-GENIWFTGGTCIGGHGLSIGSVGDR-SNNVV 238 (362)
T ss_dssp EESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEEECSS-SCCEE
T ss_pred EEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeC-CeEEEEEEEEEeCCceeEEeecccc-CCCCE
Confidence 9999999964 3 789999999999999999999999999999999 5999999999999999999998765 45789
Q ss_pred EEEEEEeeEEECCcceEEEEeecCCCCceEEcEEEEeeeeccCc-ccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEE
Q 042768 263 QNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFIDAVMRNVQ-FPIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRG 341 (397)
Q Consensus 263 ~ni~i~n~~~~~~~~gi~i~s~~~~~~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~ 341 (397)
+||+|+||+|.++.+|++||+|++ ++|.++||+|+|++|+++. +||.|++.|++.. .+.......+|+||+|+||++
T Consensus 239 ~nV~v~n~~~~~t~~GirIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~-~~~~p~~~~~i~nI~~~ni~g 316 (362)
T 1czf_A 239 KNVTIEHSTVSNSENAVRIKTISG-ATGSVSEITYSNIVMSGISDYGVVIQQDYEDGK-PTGKPTNGVTIQDVKLESVTG 316 (362)
T ss_dssp EEEEEEEEEEEEEEEEEEEEEETT-CCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTE-ECSCCCSSEEEEEEEEEEEEE
T ss_pred EEEEEEeeEEECCceEEEEEEeCC-CCceEeeEEEEeEEEECcccccEEEEEecCCCC-CCCCCCCCceEEEEEEEEEEE
Confidence 999999999999999999999987 7899999999999999987 7999999987531 111122457999999999999
Q ss_pred eecC-CceEEEecCCCCceecEEEEeEEEEeCCccccceeecccc
Q 042768 342 TSAT-PIAIKFDCSPKYPCQGIRLQNINLRHLKQEAQSSCNNVIG 385 (397)
Q Consensus 342 ~~~~-~~~~~i~~~~~~~i~~i~~~nv~i~~~~~~~~~~c~n~~~ 385 (397)
+... ..++.+.|. +.||+||+|+||+++. +.....|.|++.
T Consensus 317 t~~~~~~~i~i~c~-~~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 358 (362)
T 1czf_A 317 SVDSGATEIYLLCG-SGSCSDWTWDDVKVTG--GKKSTACKNFPS 358 (362)
T ss_dssp EECTTSEEEEEECC-TTTEEEEEEEEEEEES--SBCCSCCBSCCT
T ss_pred EecCCceEEEEEeC-CCcCcCEEEEeEEEEc--CCCcccCcCCCC
Confidence 9876 568999998 7899999999999984 345678999984
No 5
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=2e-56 Score=458.22 Aligned_cols=330 Identities=23% Similarity=0.341 Sum_probs=272.4
Q ss_pred CceeEEeeccCccCCCccchHHHHHHHHHHHhhcCCCcEEEEcCcEEEecceeecCCCCCcceEEEEc--cEEEeecccc
Q 042768 29 TTTTYNVLSFGAKGNGVTDSTQAFAKAWAAACASTESATLYVPKGRYLLGSVAFNGDCKSSDITFRID--GTLVAPADYR 106 (397)
Q Consensus 29 ~~~~~~v~dfGA~~dg~tddt~aiq~Ai~~ac~~~~g~~v~~p~G~Y~~~~l~l~~~~~s~~v~l~~~--G~l~~~~~~~ 106 (397)
.+..++|++|||++||.+|||+|||+||+ +|+. |++|+||+|+|+++++.|+ | +++|+++ ++|+++.+..
T Consensus 153 ~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~-~c~~--g~~v~vP~G~y~~g~i~lk----s-~v~L~l~~gatL~~s~d~~ 224 (608)
T 2uvf_A 153 KPQIVNVRDFGAIDDGKTLNTKAIQQAID-SCKP--GCRVEIPAGTYKSGALWLK----S-DMTLNLQAGAILLGSENPD 224 (608)
T ss_dssp CCCEEEGGGGTCCSSSSCCCHHHHHHHHH-TCCT--TEEEEECSEEEEECCEECC----S-SEEEEECTTEEEEECSCGG
T ss_pred CCCEEecccccccCCCCccCHHHHHHHHH-hcCC--CCEEEECCCceEecceecc----C-ceEEEecCCcEEEecCCHH
Confidence 45689999999999999999999999996 5664 8999999999999999997 6 9999995 5999999888
Q ss_pred ccCCC------------cceEEEEe--------eeceEEec-cEEecCCCcccccc----cCCC----------------
Q 042768 107 VLGQA------------DNWLSFEG--------VSGVSIIG-GALDAKGSSLWACK----ASGT---------------- 145 (397)
Q Consensus 107 ~~~~~------------~~~i~~~~--------~~nv~I~G-G~idg~g~~~w~~~----~~~~---------------- 145 (397)
+|+.. .++|.+.+ ++||+|.| |+|||+|..||+.. ..+.
T Consensus 225 ~y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~ 304 (608)
T 2uvf_A 225 DYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEITDELGRSLPQYVASKNSKVHED 304 (608)
T ss_dssp GSCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEEECTTSCEEEEECCCCTTTHHHH
T ss_pred HCcCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCccccccccccccccccccccccccccccccccc
Confidence 77631 24677776 79999999 99999998887421 0000
Q ss_pred ----------------C-----CCCCceeEEEEccCCeEEEeeeEecCcceEEEEeceecEEEEeEEEECCCCCCCCCcc
Q 042768 146 ----------------N-----CPDGATTLSFTNSNNIRINGLLSLNSQMFHIVINGCKDVHVEGVTVIAPGNSPNTDGI 204 (397)
Q Consensus 146 ----------------~-----~~~~~~~i~~~~~~nv~I~~v~i~~~~~~~i~~~~~~~v~i~n~~i~~~~~~~~~DGi 204 (397)
. ...||.+|.|.+|+|++|+++++.+++.|++++..|+|++|+|++|.. .+++|+|||
T Consensus 305 ~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~NtDGi 383 (608)
T 2uvf_A 305 GILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDANNGDGI 383 (608)
T ss_dssp BSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCTTCCSE
T ss_pred ccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCCCCCeE
Confidence 0 124899999999999999999999999999999999999999999875 456899999
Q ss_pred eeeceeeEEEEecEEecCCeeEEeCCC----------CeeEEEEeeEEeCCCe-EEEeeccccCCcCcEEEEEEEeeEEE
Q 042768 205 HVQLSMNVKITNCTIKTGDDCIPIGPG----------TKNLWIERVTCGPGHG-ISIGSLAKDLVEEGVQNVTVFKTVFT 273 (397)
Q Consensus 205 ~~~~s~nv~I~n~~i~~~dD~i~i~~~----------~~ni~i~n~~~~~~~g-i~igs~~~~~~~~~v~ni~i~n~~~~ 273 (397)
++.+|+||+|+||+|.++||||+++++ ++||+|+||+|.++|| +.|||+ ..++++||+|+||+|.
T Consensus 384 di~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~----~~~~v~nI~v~n~~~~ 459 (608)
T 2uvf_A 384 EFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSH----TGAWIEDILAENNVMY 459 (608)
T ss_dssp EEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESC----CTTCEEEEEEESCEEE
T ss_pred EecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEccc----CCCCEEEEEEEeEEEE
Confidence 999999999999999999999999875 7999999999999998 568996 5678999999999999
Q ss_pred CCcceEEEEeecCCCCceEEcEEEEeeeeccC-cccEEEEeecCCCCCCC--CCCCcceEEEeEEEEeEEEeecCC--ce
Q 042768 274 GTTNGFRIKSWARPSNGFVQGVRFIDAVMRNV-QFPIVIDQNYCPHNLNC--PGQVSGVKISDVIYQDIRGTSATP--IA 348 (397)
Q Consensus 274 ~~~~gi~i~s~~~~~~g~v~nI~~~ni~~~~~-~~~i~i~~~~~~~~~~~--~~~~~~~~i~nI~~~ni~~~~~~~--~~ 348 (397)
++.+|++||++.+ ++|.|+||+|+|++|+++ .+||.|++.|+...... +.....+.+++|+|+||+...... .+
T Consensus 460 ~t~~GirIKt~~g-~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~ 538 (608)
T 2uvf_A 460 LTDIGLRAKSTST-IGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPS 538 (608)
T ss_dssp SCSEEEEEEEETT-TCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCS
T ss_pred CCCceEEEeeecC-CCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEe
Confidence 9999999999987 789999999999999999 59999999998643200 001112345666666665544321 24
Q ss_pred EEEe--cCCCCceecEEEEeEEEEeC
Q 042768 349 IKFD--CSPKYPCQGIRLQNINLRHL 372 (397)
Q Consensus 349 ~~i~--~~~~~~i~~i~~~nv~i~~~ 372 (397)
+.+. |.+..||+||+|+||++...
T Consensus 539 i~i~g~~~~~~p~~ni~~~nv~i~~~ 564 (608)
T 2uvf_A 539 IEIKGDTANKAWHRLVHVNNVQLNNV 564 (608)
T ss_dssp EEEECBGGGTBCEEEEEEEEEEEESC
T ss_pred EEEEEEcCCCCccccEEEEeEEEEcc
Confidence 4554 45566899999999988754
No 6
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=3e-56 Score=427.16 Aligned_cols=318 Identities=26% Similarity=0.423 Sum_probs=275.5
Q ss_pred chHHHHHHHHHHHhhcCCCcEEEEcCcEEEecce-eecCCCCCcceEEEEccEEEeeccccccCCCcceEEEEeeeceEE
Q 042768 47 DSTQAFAKAWAAACASTESATLYVPKGRYLLGSV-AFNGDCKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGVSGVSI 125 (397)
Q Consensus 47 ddt~aiq~Ai~~ac~~~~g~~v~~p~G~Y~~~~l-~l~~~~~s~~v~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv~I 125 (397)
.||+|||+||+ +|++.++++|+||+|+|+. + .|+ + +++|+++|++.+ ++..|. ++|+.+.+ +||+|
T Consensus 6 ~dt~aiq~ai~-~c~~~~g~~v~vP~G~~~~--l~~l~----~-~~~l~~~g~~~~--~~~~w~--g~~i~~~~-~nv~I 72 (339)
T 2iq7_A 6 TDAAAAIKGKA-SCTSIILNGIVVPAGTTLD--MTGLK----S-GTTVTFQGKTTF--GYKEWE--GPLISFSG-TNINI 72 (339)
T ss_dssp SCHHHHHHHGG-GCSEEEEESCEECTTCCEE--ECSCC----T-TCEEEEESEEEE--CCCCSC--CCSEEEEE-ESCEE
T ss_pred CCHHHHHHHHH-HhhccCCCeEEECCCEEEE--eeccC----C-CeEEEEeCcEEc--cccccc--CcEEEEEc-ccEEE
Confidence 57999999996 5788778999999999984 3 444 5 899999998876 345554 46888875 99999
Q ss_pred ec---cEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcceEEEEeceecEEEEeEEEECCCC----C
Q 042768 126 IG---GALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQMFHIVINGCKDVHVEGVTVIAPGN----S 198 (397)
Q Consensus 126 ~G---G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~~~i~~~~~~~v~i~n~~i~~~~~----~ 198 (397)
.| |+|||+|+.||+.... .....||++|.|.+|+|++|++++++++|.|++++..|++++|++++|.++.+ +
T Consensus 73 ~G~~gG~IdG~G~~~w~~~~~-~~~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~ 151 (339)
T 2iq7_A 73 NGASGHSIDCQGSRWWDSKGS-NGGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAGDSAGG 151 (339)
T ss_dssp EECTTCEEECCGGGTCCSCGG-GSSSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGGGGTTC
T ss_pred EcCCCCEEECCcccccccccc-cCCCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCccccccC
Confidence 99 6999999999975432 22467899999999999999999999999999999999999999999999743 7
Q ss_pred CCCCcceeeceeeEEEEecEEecCCeeEEeCCCCeeEEEEeeEEeCCCeEEEeeccccCCcCcEEEEEEEeeEEECCcce
Q 042768 199 PNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLVEEGVQNVTVFKTVFTGTTNG 278 (397)
Q Consensus 199 ~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~g 278 (397)
+|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|.++||++|||++.+ ..+.++||+|+||+|.++.+|
T Consensus 152 ~ntDGid~~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGSlg~~-~~~~v~nV~v~n~~~~~~~~g 229 (339)
T 2iq7_A 152 HNTDAFDVGSSTGVYISGANVKNQDDCLAINS-GTNITFTGGTCSGGHGLSIGSVGGR-SDNTVKTVTISNSKIVNSDNG 229 (339)
T ss_dssp CSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEEESSS-SCCEEEEEEEEEEEEESCSEE
T ss_pred CCCCcEEEcCcceEEEEecEEecCCCEEEEcC-CccEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCcE
Confidence 89999999999999999999999999999999 5999999999999999999998765 457899999999999999999
Q ss_pred EEEEeecCCCCceEEcEEEEeeeeccCcc-cEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeecC-CceEEEecCCC
Q 042768 279 FRIKSWARPSNGFVQGVRFIDAVMRNVQF-PIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTSAT-PIAIKFDCSPK 356 (397)
Q Consensus 279 i~i~s~~~~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-~~~~~i~~~~~ 356 (397)
++||+|.+ ++|.++||+|+|++|+++.. ||.|++.|++.. .+......++|+||+|+||+++... ..++.+.|. .
T Consensus 230 irIkt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~~i~ni~~~ni~gt~~~~~~~~~i~c~-~ 306 (339)
T 2iq7_A 230 VRIKTVSG-ATGSVSGVTYSGITLSNIAKYGIVIEQDYENGS-PTGTPTNGVPITGLTLSKITGSVASSGTNVYILCA-S 306 (339)
T ss_dssp EEEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSSCEEEEEEEEEEEEECTTSEEEEEECC-T
T ss_pred EEEEEeCC-CCeEEEEEEEEeEEccCcccccEEEEeecCCCC-CCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEeC-C
Confidence 99999987 78999999999999999886 999999987631 1111224578999999999999876 568999995 8
Q ss_pred CceecEEEEeEEEEeCCccccceeecccc
Q 042768 357 YPCQGIRLQNINLRHLKQEAQSSCNNVIG 385 (397)
Q Consensus 357 ~~i~~i~~~nv~i~~~~~~~~~~c~n~~~ 385 (397)
.||+||+|+||+++. +.....|.|++.
T Consensus 307 ~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 333 (339)
T 2iq7_A 307 GACSNWKWSGVSVTG--GKKSTKCSNIPS 333 (339)
T ss_dssp TCEEEEEEEEEEEES--SBCCSCCBCCCT
T ss_pred CcEecEEEEeEEEEc--CCCcccccCCCC
Confidence 899999999999984 345678999984
No 7
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=3.5e-56 Score=426.27 Aligned_cols=318 Identities=23% Similarity=0.402 Sum_probs=275.2
Q ss_pred cchHHHHHHHHHHHhhcCCCcEEEEcCcEEEecce-eecCCCCCcceEEEEccEEEeeccccccCCCcceEEEEeeeceE
Q 042768 46 TDSTQAFAKAWAAACASTESATLYVPKGRYLLGSV-AFNGDCKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGVSGVS 124 (397)
Q Consensus 46 tddt~aiq~Ai~~ac~~~~g~~v~~p~G~Y~~~~l-~l~~~~~s~~v~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv~ 124 (397)
..||+|||+|++ +|++.++++|+||+|+|+. + .|+ + +++|+++|++.+ ++..|. ++|+.+. .+||+
T Consensus 5 ~~~t~aiq~ai~-~c~~~gg~~v~vP~G~~~~--l~~l~----~-~~~l~~~g~~~~--~~~~w~--g~li~~~-~~nv~ 71 (336)
T 1nhc_A 5 FTSASEASESIS-SCSDVVLSSIEVPAGETLD--LSDAA----D-GSTITFEGTTSF--GYKEWK--GPLIRFG-GKDLT 71 (336)
T ss_dssp ESSHHHHHHHGG-GCSEEEEESCEECTTCCEE--CTTCC----T-TCEEEEESEEEE--CCCCSC--CCSEECC-EESCE
T ss_pred ECCHHHHHHHHH-HhhccCCCeEEECCCEEEE--eeccC----C-CeEEEEeceEEc--cccccc--CcEEEEe-cCCEE
Confidence 357999999996 5788788999999999973 3 444 5 899999998876 345564 4688876 49999
Q ss_pred Eec---cEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcceEEEEeceecEEEEeEEEECCCC----
Q 042768 125 IIG---GALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQMFHIVINGCKDVHVEGVTVIAPGN---- 197 (397)
Q Consensus 125 I~G---G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~~~i~~~~~~~v~i~n~~i~~~~~---- 197 (397)
|.| |+|||+|+.||+.... .....||+++.|.+|+|++|++++++++|.|++++. |++++|+|++|.++.+
T Consensus 72 I~G~~gG~IdG~G~~~w~~~~~-~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~ 149 (336)
T 1nhc_A 72 VTMADGAVIDGDGSRWWDSKGT-NGGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDGDDNG 149 (336)
T ss_dssp EEECTTCEEECCGGGTCCSCTT-TSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEECTTHHHHT
T ss_pred EEcCCCeEEECCccccccccCc-CCCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCccccc
Confidence 999 6999999999985432 235678999999999999999999999999999999 9999999999999854
Q ss_pred CCCCCcceeeceeeEEEEecEEecCCeeEEeCCCCeeEEEEeeEEeCCCeEEEeeccccCCcCcEEEEEEEeeEEECCcc
Q 042768 198 SPNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLVEEGVQNVTVFKTVFTGTTN 277 (397)
Q Consensus 198 ~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~ 277 (397)
++|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|.++||++|||++.+ ..+.++||+|+|+++.++.+
T Consensus 150 ~~ntDGidi~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~ 227 (336)
T 1nhc_A 150 GHNTDGFDISESTGVYISGATVKNQDDCIAINS-GESISFTGGTCSGGHGLSIGSVGGR-DDNTVKNVTISDSTVSNSAN 227 (336)
T ss_dssp CCSCCSEEECSCEEEEEESCEEESSSEEEEESS-EEEEEEESCEEESSSEEEEEEESSS-SCCEEEEEEEEEEEEESCSE
T ss_pred CCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeC-CeEEEEEeEEEECCcCceEccCccc-cCCCEEEEEEEeeEEECCCc
Confidence 789999999999999999999999999999999 5999999999999999999998765 45789999999999999999
Q ss_pred eEEEEeecCCCCceEEcEEEEeeeeccCcc-cEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeecC-CceEEEecCC
Q 042768 278 GFRIKSWARPSNGFVQGVRFIDAVMRNVQF-PIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTSAT-PIAIKFDCSP 355 (397)
Q Consensus 278 gi~i~s~~~~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-~~~~~i~~~~ 355 (397)
|++||+|.+ ++|.++||+|+|++|+++.. ||.|++.|++.. .+....+.++|+||+|+||+++... ..++.+.|.
T Consensus 228 girIkt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~~i~~i~~~ni~gt~~~~~~~v~i~c~- 304 (336)
T 1nhc_A 228 GVRIKTIYK-ETGDVSEITYSNIQLSGITDYGIVIEQDYENGS-PTGTPSTGIPITDVTVDGVTGTLEDDATQVYILCG- 304 (336)
T ss_dssp EEEEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSSCEEEEEEEEEEEEECTTCEEEEEECC-
T ss_pred EEEEEEECC-CCCEEeeeEEeeEEeeccccccEEEEeecCCCC-CCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEcC-
Confidence 999999987 78999999999999999986 999999987631 1111224578999999999999876 568999995
Q ss_pred CCceecEEEEeEEEEeCCccccceeecccc
Q 042768 356 KYPCQGIRLQNINLRHLKQEAQSSCNNVIG 385 (397)
Q Consensus 356 ~~~i~~i~~~nv~i~~~~~~~~~~c~n~~~ 385 (397)
..||+||+|+||+++. +.....|.|++.
T Consensus 305 ~~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 332 (336)
T 1nhc_A 305 DGSCSDWTWSGVDLSG--GKTSDKCENVPS 332 (336)
T ss_dssp TTCEEEEEEEEEEEES--SBCCSCCBSCCT
T ss_pred CCcEecEEEEeEEEEc--CCCCcccCCCCC
Confidence 8899999999999984 345678999985
No 8
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=1.8e-55 Score=422.76 Aligned_cols=318 Identities=24% Similarity=0.408 Sum_probs=273.7
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEEcCcEEEecce-eecCCCCCcceEEEEccEEEeeccccccCCCcceEEEEeeeceEEe
Q 042768 48 STQAFAKAWAAACASTESATLYVPKGRYLLGSV-AFNGDCKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGVSGVSII 126 (397)
Q Consensus 48 dt~aiq~Ai~~ac~~~~g~~v~~p~G~Y~~~~l-~l~~~~~s~~v~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv~I~ 126 (397)
||+|||+|++ +|++.++++|+||+|+|+. + .|+ + +++|+++|++.+ ++..|. .++|+.+.+ +||+|.
T Consensus 7 ~t~aiq~ai~-~c~~~gg~~v~vP~G~~l~--l~~l~----~-~~~l~~~g~~~~--~~~~w~-~g~~i~~~~-~ni~I~ 74 (349)
T 1hg8_A 7 EYSGLATAVS-SCKNIVLNGFQVPTGKQLD--LSSLQ----N-DSTVTFKGTTTF--ATTADN-DFNPIVISG-SNITIT 74 (349)
T ss_dssp SGGGHHHHHH-HCSEEEECCCEECTTCCEE--ETTCC----T-TCEEEECSEEEE--CCCCCT-TCCSEEEEE-ESCEEE
T ss_pred CHHHHHHHHH-hccccCCCEEEECCCEEEE--eeccC----C-CeEEEEcCceec--cccccc-CCceEEEEC-ccEEEE
Confidence 6899999996 5787788999999999984 3 344 5 899999998765 335552 257888865 999999
Q ss_pred c---cEEecCCCcccccccCCCCCC-CCceeEEE-E-ccCCeEEEeeeEecCcceEEEEeceecEEEEeEEEECCC-C--
Q 042768 127 G---GALDAKGSSLWACKASGTNCP-DGATTLSF-T-NSNNIRINGLLSLNSQMFHIVINGCKDVHVEGVTVIAPG-N-- 197 (397)
Q Consensus 127 G---G~idg~g~~~w~~~~~~~~~~-~~~~~i~~-~-~~~nv~I~~v~i~~~~~~~i~~~~~~~v~i~n~~i~~~~-~-- 197 (397)
| |+|||+|+.||+.... .... .||++|.| . .++|++|++++++++|.|++++..|++++|+|++|.++. +
T Consensus 75 G~~~G~IdG~G~~ww~~~~~-~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~~~~ 153 (349)
T 1hg8_A 75 GASGHVIDGNGQAYWDGKGS-NSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDNRAGDKP 153 (349)
T ss_dssp ECTTCEEECCGGGTCCSCTT-CTTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEECGGGSSC
T ss_pred ecCCCEEcCCcchhhhcccc-cCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECCCCccc
Confidence 9 8999999999985433 1122 68999999 7 788999999999999999999999999999999999853 2
Q ss_pred ---------CCCCCcceeeceeeEEEEecEEecCCeeEEeCCCCeeEEEEeeEEeCCCeEEEeeccccCCcCcEEEEEEE
Q 042768 198 ---------SPNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLVEEGVQNVTVF 268 (397)
Q Consensus 198 ---------~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~~~~~~~~~v~ni~i~ 268 (397)
++|+|||++.+|+||+|+||++.++||||++++ .+||+|+||+|..+||++|||+|.+ ..+.++||+|+
T Consensus 154 ~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~nV~v~ 231 (349)
T 1hg8_A 154 NAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTS-GTNIVVSNMYCSGGHGLSIGSVGGK-SDNVVDGVQFL 231 (349)
T ss_dssp CTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESS-EEEEEEEEEEEESSCCEEEEEESSS-SCCEEEEEEEE
T ss_pred cccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeC-CeEEEEEeEEEeCCcceEEcccccc-ccCCEEEEEEE
Confidence 589999999999999999999999999999999 6999999999999999999999776 45789999999
Q ss_pred eeEEECCcceEEEEeecCCCCceEEcEEEEeeeeccCc-ccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeecC-C
Q 042768 269 KTVFTGTTNGFRIKSWARPSNGFVQGVRFIDAVMRNVQ-FPIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTSAT-P 346 (397)
Q Consensus 269 n~~~~~~~~gi~i~s~~~~~~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-~ 346 (397)
||+|.++.+|++||++.+ ++|.++||+|+|++|+++. +||.|++.|++.. .+....+.++|+||+|+||+++... .
T Consensus 232 n~~~~~~~~GirIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~~-~~~~p~~~~~i~~I~~~ni~gt~~~~~ 309 (349)
T 1hg8_A 232 SSQVVNSQNGCRIKSNSG-ATGTINNVTYQNIALTNISTYGVDVQQDYLNGG-PTGKPTNGVKISNIKFIKVTGTVASSA 309 (349)
T ss_dssp EEEEEEEEEEEEEEEETT-CCEEEEEEEEEEEEEEEEEEEEEEEEEEECSSS-BCSCCCSSEEEEEEEEEEEEEEECTTS
T ss_pred EEEEECCCcEEEEEecCC-CCccccceEEEEEEEEccccccEEEEeeccCCC-CCCcccCCceEEEEEEEeEEEEeCCCC
Confidence 999999999999999987 7899999999999999997 6999999997631 1222234589999999999998876 5
Q ss_pred ceEEEecCCCCceecEEEEeEEEEeCCccccceeecccc
Q 042768 347 IAIKFDCSPKYPCQGIRLQNINLRHLKQEAQSSCNNVIG 385 (397)
Q Consensus 347 ~~~~i~~~~~~~i~~i~~~nv~i~~~~~~~~~~c~n~~~ 385 (397)
.++.+.|. +.||+||+|+||+++. +.....|.|+..
T Consensus 310 ~~v~i~c~-~~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 345 (349)
T 1hg8_A 310 QDWFILCG-DGSCSGFTFSGNAITG--GGKTSSCNYPTN 345 (349)
T ss_dssp EEEEEECC-SSCEEEEEEESCEEEC--CSSCCEECSSSS
T ss_pred EEEEEEeC-CCcCcCEEEEeEEEEc--CCCCeeeeCCCC
Confidence 68999998 6899999999999984 345678999986
No 9
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=1.7e-55 Score=421.68 Aligned_cols=315 Identities=23% Similarity=0.429 Sum_probs=273.5
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEEcCcEEEecce-eecCCCCCcceEEEEccEEEeeccccccCCCcceEEEEeeeceEEe
Q 042768 48 STQAFAKAWAAACASTESATLYVPKGRYLLGSV-AFNGDCKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGVSGVSII 126 (397)
Q Consensus 48 dt~aiq~Ai~~ac~~~~g~~v~~p~G~Y~~~~l-~l~~~~~s~~v~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv~I~ 126 (397)
-++|||+|++ +|++.++++|+||+|+|+. + .|+ + +++|+++|++.+ ++..|. ++|+.+.+ +||+|.
T Consensus 11 g~~aiq~ai~-~c~~~gg~~v~vP~G~~l~--l~~l~----~-~~~l~~~g~~~~--~~~~w~--g~li~~~~-~nv~I~ 77 (339)
T 1ia5_A 11 GASSASKSKT-SCSTIVLSNVAVPSGTTLD--LTKLN----D-GTHVIFSGETTF--GYKEWS--GPLISVSG-SDLTIT 77 (339)
T ss_dssp HHHHHHHHGG-GCSEEEEESCEECTTCCEE--ECSCC----T-TCEEEEESEEEE--CCCCSC--CCSEEEEE-ESCEEE
T ss_pred chHHHHHHHH-HhhccCCCeEEECCCEEEE--eeccC----C-CeEEEEeCcEEc--cccccc--CcEEEEEc-CcEEEE
Confidence 3679999995 5788888999999999984 3 444 6 899999998876 345564 46888875 999999
Q ss_pred c---cEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcceEEEEeceecEEEEeEEEECCCC----CC
Q 042768 127 G---GALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQMFHIVINGCKDVHVEGVTVIAPGN----SP 199 (397)
Q Consensus 127 G---G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~~~i~~~~~~~v~i~n~~i~~~~~----~~ 199 (397)
| |+|||+|+.||+.... .....||++|.|.+|+|++|+++++.++|.|++++..|++++|++++|.++.+ ++
T Consensus 78 G~~gG~IdG~G~~~w~~~~~-~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ 156 (339)
T 1ia5_A 78 GASGHSINGDGSRWWDGEGG-NGGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNGGH 156 (339)
T ss_dssp ECTTCEEECCGGGTCSSCTT-TSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEECGGGTTTTCC
T ss_pred cCCCeEEeCCCCcccccccc-CCCCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEECCccccccCC
Confidence 9 5999999999985432 23567899999999999999999999999999999999999999999999743 68
Q ss_pred CCCcceeeceeeEEEEecEEecCCeeEEeCCCCeeEEEEeeEEeCCCeEEEeeccccCCcCcEEEEEEEeeEEECCcceE
Q 042768 200 NTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLVEEGVQNVTVFKTVFTGTTNGF 279 (397)
Q Consensus 200 ~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~gi 279 (397)
|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|.++||++|||++.+ ..+.++||+|+|++|.++.+|+
T Consensus 157 ntDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~gi 234 (339)
T 1ia5_A 157 NTDAFDIGTSTYVTISGATVYNQDDCVAVNS-GENIYFSGGYCSGGHGLSIGSVGGR-SDNTVKNVTFVDSTIINSDNGV 234 (339)
T ss_dssp SCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSSCEEEEEECSS-SCCEEEEEEEEEEEEESCSEEE
T ss_pred CCCcEEecCCceEEEEeeEEEcCCCeEEEeC-CeEEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCcEE
Confidence 9999999999999999999999999999999 5999999999999999999998765 4578999999999999999999
Q ss_pred EEEeecCCCCceEEcEEEEeeeeccCcc-cEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeecC-CceEEEecCCCC
Q 042768 280 RIKSWARPSNGFVQGVRFIDAVMRNVQF-PIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTSAT-PIAIKFDCSPKY 357 (397)
Q Consensus 280 ~i~s~~~~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-~~~~~i~~~~~~ 357 (397)
+||+|.+ ++|.++||+|+|++|++++. ||.|++.|.. .. ....+.++|+||+|+||+++... ..++.+.|. ..
T Consensus 235 rIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~-~~--~~p~~~~~i~ni~~~ni~gt~~~~~~~v~i~c~-~~ 309 (339)
T 1ia5_A 235 RIKTNID-TTGSVSDVTYKDITLTSIAKYGIVVQQNYGD-TS--STPTTGVPITDFVLDNVHGSVVSSGTNILISCG-SG 309 (339)
T ss_dssp EEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEETC-TT--SCCCSSSCEEEEEEEEEEEEECTTSEEEEEECC-TT
T ss_pred EEEEeCC-CCcEEEeeEEEEEEEECcccccEEEEccCCC-CC--CCCcCCceEEEEEEEeEEEEeCCCCEEEEEEeC-CC
Confidence 9999987 78999999999999999886 9999999832 22 11224578999999999999876 568999995 88
Q ss_pred ceecEEEEeEEEEeCCccccceeecccc
Q 042768 358 PCQGIRLQNINLRHLKQEAQSSCNNVIG 385 (397)
Q Consensus 358 ~i~~i~~~nv~i~~~~~~~~~~c~n~~~ 385 (397)
||+||+|+||+++. +.....|+|++.
T Consensus 310 ~c~ni~~~nv~i~~--~~~~~~C~n~~~ 335 (339)
T 1ia5_A 310 SCSDWTWTDVSVSG--GKTSSKCTNVPS 335 (339)
T ss_dssp CEEEEEEEEEEEES--SBCCSCCBSCCT
T ss_pred CEecEEEEeEEEEC--CCCCeeeECCCC
Confidence 99999999999984 345678999985
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=5.7e-55 Score=416.40 Aligned_cols=309 Identities=23% Similarity=0.373 Sum_probs=266.1
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEcCcEEEecceeecCCCCCcceEEEEccEEEeeccccccCCCcceEEEEeeeceEEec-
Q 042768 49 TQAFAKAWAAACASTESATLYVPKGRYLLGSVAFNGDCKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGVSGVSIIG- 127 (397)
Q Consensus 49 t~aiq~Ai~~ac~~~~g~~v~~p~G~Y~~~~l~l~~~~~s~~v~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv~I~G- 127 (397)
++|||+ + ++|++.++++|+||+|+|+ .|.|+ + +++|+++|++.+ ++..|. ++|+.+. .+||+|.|
T Consensus 8 ~~aiq~-i-~aC~~~gg~~v~vP~G~~l--~l~l~----~-~~~l~~~g~~~~--~~~~w~--~~~i~~~-~~ni~I~G~ 73 (335)
T 1k5c_A 8 VDDAKD-I-AGCSAVTLNGFTVPAGNTL--VLNPD----K-GATVTMAGDITF--AKTTLD--GPLFTID-GTGINFVGA 73 (335)
T ss_dssp TTGGGG-C-TTCSEEEECCEEECTTCCE--EECCC----T-TCEEEECSCEEE--CCCCSC--SCSEEEE-EEEEEEECT
T ss_pred HHHhHH-H-HhcccCCCCEEEECCCEEE--EEEeC----C-CeEEEEeccEec--cccccc--CcEEEEE-ccCEEEEeC
Confidence 678999 7 5689888899999999998 35555 6 899999998876 345565 4689887 59999999
Q ss_pred -cEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcceEEEEeceec-EEEEeEEEECCCC-----CCC
Q 042768 128 -GALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQMFHIVINGCKD-VHVEGVTVIAPGN-----SPN 200 (397)
Q Consensus 128 -G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~~~i~~~~~~~-v~i~n~~i~~~~~-----~~~ 200 (397)
|+|||+|+.||+.... .....||++|.|.+|+ ++|++++++|+|.|++++..|++ ++|+|++|.++.+ ++|
T Consensus 74 ~G~idG~G~~ww~~~~~-~~~~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~N 151 (335)
T 1k5c_A 74 DHIFDGNGALYWDGKGT-NNGTHKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTKNLGHN 151 (335)
T ss_dssp TCEEECCGGGTCCSCTT-TSSSCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGGGCCCS
T ss_pred ccEEcCChhHhhhcccc-cCCCCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCcccccCCC
Confidence 8999999999985433 2356789999999999 99999999999999999999999 9999999999743 789
Q ss_pred CCcceeeceeeEEEEecEEecCCeeEEeCCCCeeEEEEeeEEeCCCeEEEeeccccCCcCcEEEEEEEeeEEECCcceEE
Q 042768 201 TDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLVEEGVQNVTVFKTVFTGTTNGFR 280 (397)
Q Consensus 201 ~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~gi~ 280 (397)
+||||+ +|+||+|+||++.++||||+++++ +||+|+||+|..+||++|||++. .+.++||+|+||+|.++.+|++
T Consensus 152 tDGidi-~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisIGS~g~---~~~v~nV~v~n~~~~~t~~gir 226 (335)
T 1k5c_A 152 TDGFDV-SANNVTIQNCIVKNQDDCIAINDG-NNIRFENNQCSGGHGISIGSIAT---GKHVSNVVIKGNTVTRSMYGVR 226 (335)
T ss_dssp CCSEEE-ECSSEEEESCEEESSSCSEEEEEE-EEEEEESCEEESSCCEEEEEECT---TCEEEEEEEESCEEEEEEEEEE
T ss_pred CCeEcc-cCCeEEEEeeEEEcCCCEEEeeCC-eeEEEEEEEEECCccCeEeeccC---CCCEEEEEEEeeEEECCCceEE
Confidence 999999 999999999999999999999995 99999999999999999999853 4689999999999999999999
Q ss_pred EEeecCCCC-ceEEcEEEEeeeeccCc-ccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEE--EeecC-CceEEEecCC
Q 042768 281 IKSWARPSN-GFVQGVRFIDAVMRNVQ-FPIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIR--GTSAT-PIAIKFDCSP 355 (397)
Q Consensus 281 i~s~~~~~~-g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~--~~~~~-~~~~~i~~~~ 355 (397)
||++++ ++ |.++||+|+||+|+++. +||.|++.|.. .. ....+..+|+||+|+||+ ++... ..++.+.|.+
T Consensus 227 IKt~~g-~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~-~~--~~p~~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~~ 302 (335)
T 1k5c_A 227 IKAQRT-ATSASVSGVTYDANTISGIAKYGVLISQSYPD-DV--GNPGTGAPFSDVNFTGGATTIKVNNAATRVTVECGN 302 (335)
T ss_dssp EEEETT-CCSCEEEEEEEESCEEEEEEEEEEEEEEEETS-SS--SSCCSSSCEEEEEECSSCEEEEECTTCEEEEEECSS
T ss_pred EEEeCC-CCcceEeeeEEEEEEEEccccccEEEEeeCCC-CC--CCCCCCceEEEEEEEEEEEeeEEcCCceEEEEECCC
Confidence 999987 66 99999999999999997 69999999842 21 112245789999999999 76654 5689999976
Q ss_pred CCceecEEEEeEEEEeCCccccceeecccc
Q 042768 356 KYPCQGIRLQNINLRHLKQEAQSSCNNVIG 385 (397)
Q Consensus 356 ~~~i~~i~~~nv~i~~~~~~~~~~c~n~~~ 385 (397)
||+||+|+||+|+... ...+.|.++..
T Consensus 303 --~c~ni~~~nv~i~~~~-~~~~~~~~~~~ 329 (335)
T 1k5c_A 303 --CSGNWNWSQLTVTGGK-AGTIKSDKAKI 329 (335)
T ss_dssp --EESEEEEEEEEEESSB-CCCEECTTCEE
T ss_pred --cCCCEEEEeEEEEcCC-CCceEeEEeEe
Confidence 9999999999998643 44566666653
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=1.9e-48 Score=386.07 Aligned_cols=293 Identities=16% Similarity=0.151 Sum_probs=247.3
Q ss_pred CceeEEeeccCccCCCccchHHHHHHHHHHHhhcCCCcEEEEcCc-EEEe------------cceeecCCCCCcceEEEE
Q 042768 29 TTTTYNVLSFGAKGNGVTDSTQAFAKAWAAACASTESATLYVPKG-RYLL------------GSVAFNGDCKSSDITFRI 95 (397)
Q Consensus 29 ~~~~~~v~dfGA~~dg~tddt~aiq~Ai~~ac~~~~g~~v~~p~G-~Y~~------------~~l~l~~~~~s~~v~l~~ 95 (397)
..+++||+||||++| ||+|||+||+ +|++.+|++|+||+| +|++ +++.|+ | +++|++
T Consensus 48 ~~~~~nV~dfGA~gD----dT~AIqkAId-aCs~~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~Lk----S-nVtL~L 117 (600)
T 2x6w_A 48 CDPSGNVIQPGPNVD----SRQYLQAAID-YVSSNGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQLR----S-NVNLNI 117 (600)
T ss_dssp BCTTSCBCCCCTTCC----CHHHHHHHHH-HHHHTTCEEEEECTTCEEEECSCCCGGGGGGTEEEECC----T-TEEEEE
T ss_pred CCcEEeeecCCCCcc----CHHHHHHHHH-HhhhcCCCEEEECCCCEEEecccccccccccccceEEc----C-ceEEee
Confidence 356899999999998 9999999996 578889999999999 9999 888887 6 999999
Q ss_pred ccEEEeeccccccCCC----c---ceEEEEeeeceEEec-cEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEee
Q 042768 96 DGTLVAPADYRVLGQA----D---NWLSFEGVSGVSIIG-GALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGL 167 (397)
Q Consensus 96 ~G~l~~~~~~~~~~~~----~---~~i~~~~~~nv~I~G-G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v 167 (397)
+|+|+++.++.+|+.. . .+|.+.+++||+|.| |+|||+|+.||.... ....+|+ +.+.+|+ |+++
T Consensus 118 dGtL~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~~---~~~~RP~-l~f~~c~---I~GI 190 (600)
T 2x6w_A 118 EGRIHLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASSQ---LRNGVAF-GRSYNCS---VTGI 190 (600)
T ss_dssp CSEEEECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTTC---CEEEEEC-CSEEEEE---EESC
T ss_pred ecEEEEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCccccccccc---cCCCCCE-EEEeeeE---EeCe
Confidence 9999999998888641 2 237788899999999 999999999996221 1113677 7888887 9999
Q ss_pred eEecC-cceEEEE---eceecEEEEeEE----EECCCCCCCCCcceeeceeeEEEEecEEecCCeeEEe-CCCCe-eEEE
Q 042768 168 LSLNS-QMFHIVI---NGCKDVHVEGVT----VIAPGNSPNTDGIHVQLSMNVKITNCTIKTGDDCIPI-GPGTK-NLWI 237 (397)
Q Consensus 168 ~i~~~-~~~~i~~---~~~~~v~i~n~~----i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i-~~~~~-ni~i 237 (397)
+++|+ |.|++++ ..|+|++|+|++ |.+ ++|+||| |+|+||.|.++||||++ |+++. ++.+
T Consensus 191 Ti~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~KSGs~~ni~~ 260 (600)
T 2x6w_A 191 TFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSMSSSFARNIAC 260 (600)
T ss_dssp EEESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEECCCTTHHHHEE
T ss_pred EEECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEecCCCcCCeEE
Confidence 99999 9999999 999999999999 776 6899999 99999999999999999 99874 4677
Q ss_pred EeeEEeCCC-eEEEeeccccCCcCcEEEEEEEeeEEECCcceEEEEeecCCCCceEEcEEEEeeeeccCcccEEEEeecC
Q 042768 238 ERVTCGPGH-GISIGSLAKDLVEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFIDAVMRNVQFPIVIDQNYC 316 (397)
Q Consensus 238 ~n~~~~~~~-gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~ 316 (397)
+ +|..+| ||+|||+ ..+.++||+|+| +||++.+ ++|.|+||+|+||+|+++..++.+.+..
T Consensus 261 e--~~~~GHgGISIGSe----~~ggV~NV~V~N----------rIKt~~G-~GG~V~NItfeNI~m~nV~~~I~i~q~~- 322 (600)
T 2x6w_A 261 S--VQLHQHDTFYRGST----VNGYCRGAYVVM----------HAAEAAG-AGSYAYNMQVENNIAVIYGQFVILGSDV- 322 (600)
T ss_dssp E--EEECSSSEEEESCE----EEEESEEEEEEE----------CGGGCTT-TCSEEEEEEEESCEEEESSEEEEEEECB-
T ss_pred E--EEcCCCCcEEeccc----ccCcEEEEEEEE----------EEEeecC-CCceEEEEEEEEEEEEccceEEEeCCCC-
Confidence 7 677777 8999997 456799999999 5666656 7899999999999999999888887641
Q ss_pred CCCCCCCCCCcceEEEeEEEEeEEEeecCC------ceEEEecCC-------CCceecEEEEeEEEEeCC
Q 042768 317 PHNLNCPGQVSGVKISDVIYQDIRGTSATP------IAIKFDCSP-------KYPCQGIRLQNINLRHLK 373 (397)
Q Consensus 317 ~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~------~~~~i~~~~-------~~~i~~i~~~nv~i~~~~ 373 (397)
...+.++|+||+|+||+++.... ++..+.+.+ +.+|++|+|+|+++..++
T Consensus 323 -------~~~s~~~IsnItfkNItgTsas~aav~~~~g~~i~g~p~~~~~~~~~~Ie~V~~~~~~~~~~~ 385 (600)
T 2x6w_A 323 -------TATVSGHLNDVIVSGNIVSIGERAAFSAPFGAFIDIGPDNSGASNVQDIQRVLVTGNSFYAPA 385 (600)
T ss_dssp -------CSSCBCEEEEEEEESCEEEECSCCTTSSSCEEEEEECCCTTCCSSSCCEEEEEEESCEEECCT
T ss_pred -------CCCCCceEEEEEEEeEEEEeccccccccccceEEEecCcccccccccceeEEEEeceEEEcCC
Confidence 12355699999999999987542 236666655 368999999999997765
No 12
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=3.1e-41 Score=339.81 Aligned_cols=303 Identities=11% Similarity=0.080 Sum_probs=237.2
Q ss_pred EEeeccCccCCCccchHHHHHHHHHHHhhc-------------------------CCCcEEEEcCcEEEe---cceeecC
Q 042768 33 YNVLSFGAKGNGVTDSTQAFAKAWAAACAS-------------------------TESATLYVPKGRYLL---GSVAFNG 84 (397)
Q Consensus 33 ~~v~dfGA~~dg~tddt~aiq~Ai~~ac~~-------------------------~~g~~v~~p~G~Y~~---~~l~l~~ 84 (397)
+|...|||++||.+|++.+|. ++.++|.. .++++|+||+|+|++ +++.|+
T Consensus 143 ~n~~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G~yl~g~~G~i~l~- 220 (549)
T 1x0c_A 143 FDDDLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLS- 220 (549)
T ss_dssp EGGGEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSEEEECCTTCCEEEC-
T ss_pred ECCccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCeEEecCCceEEEec-
Confidence 344468999999999998888 55444443 468999999999997 579998
Q ss_pred CCCCcceE-EEEc-c-EEEeeccccccCCCcceEEEEeeeceEEec-cEEecCCCcccccccCC--CCCCCCceeEEE--
Q 042768 85 DCKSSDIT-FRID-G-TLVAPADYRVLGQADNWLSFEGVSGVSIIG-GALDAKGSSLWACKASG--TNCPDGATTLSF-- 156 (397)
Q Consensus 85 ~~~s~~v~-l~~~-G-~l~~~~~~~~~~~~~~~i~~~~~~nv~I~G-G~idg~g~~~w~~~~~~--~~~~~~~~~i~~-- 156 (397)
| +++ |+++ | .|+++ +....+++||+|.| |+|||+|..||...... ..+..+|++|.|
T Consensus 221 ---s-~~~~L~l~~GA~L~gs-----------~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~ 285 (549)
T 1x0c_A 221 ---S-SVTWVYFAPGAYVKGA-----------VEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWR 285 (549)
T ss_dssp ---T-TCCEEEECTTEEEESC-----------EEECCCSSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEE
T ss_pred ---C-CCCeEecCCCCEEEEE-----------EEEecCceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEee
Confidence 6 899 9998 5 45532 22222789999999 99999999999532110 112336777777
Q ss_pred ----EccCCeEEEeeeEecCcceEEEEe-ce-ec--EEEEeEEEECCCCCCCCCcceeeceeeEEEEecEEecCCeeEEe
Q 042768 157 ----TNSNNIRINGLLSLNSQMFHIVIN-GC-KD--VHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKTGDDCIPI 228 (397)
Q Consensus 157 ----~~~~nv~I~~v~i~~~~~~~i~~~-~~-~~--v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i 228 (397)
.+|+|++|+|++++|+|.|++++. .| ++ ++|+|+++.++. .+|+|||++. +||+|+||+|.++||||++
T Consensus 286 ~~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~n~~i~~gDDcIaI 362 (549)
T 1x0c_A 286 GTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQDVFYHTDDDGLKM 362 (549)
T ss_dssp EECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEEEEEEEESSCCEEC
T ss_pred ccccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEEeeEEeCCCCEEEE
Confidence 999999999999999999999966 56 69 999999999854 3689999998 9999999999999999999
Q ss_pred CCCCeeEEEEeeEEeC--CCe-EEEeeccccCCcCcEEEEEEEeeEEECCcc------eEEEEee--c--C------CCC
Q 042768 229 GPGTKNLWIERVTCGP--GHG-ISIGSLAKDLVEEGVQNVTVFKTVFTGTTN------GFRIKSW--A--R------PSN 289 (397)
Q Consensus 229 ~~~~~ni~i~n~~~~~--~~g-i~igs~~~~~~~~~v~ni~i~n~~~~~~~~------gi~i~s~--~--~------~~~ 289 (397)
++ +||+|+||+|+. +++ |++|+. .+.++||+|+||+|.++.. |..|++. . + +..
T Consensus 363 ks--~NI~I~n~~~~~~~g~~~IsiGs~-----~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~~ 435 (549)
T 1x0c_A 363 YY--SNVTARNIVMWKESVAPVVEFGWT-----PRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHS 435 (549)
T ss_dssp CS--SSEEEEEEEEEECSSSCSEECCBS-----CCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCSCCC
T ss_pred CC--CCEEEEeeEEEcCCCCceEEECCC-----CCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCcCCC
Confidence 98 999999999976 456 999984 5689999999999998753 4447761 1 1 136
Q ss_pred ceEEcEEEEeeeeccCc-ccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeecC-----CceEEEecCCC------C
Q 042768 290 GFVQGVRFIDAVMRNVQ-FPIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTSAT-----PIAIKFDCSPK------Y 357 (397)
Q Consensus 290 g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-----~~~~~i~~~~~------~ 357 (397)
|.|+||+|+||+|+++. .++.+...+. .++.+|+||+|+||++.+.. ..+..+.+.+. .
T Consensus 436 G~i~nI~f~NI~i~nv~~~g~~~~~~~g---------~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G~~~~~~~~~~ 506 (549)
T 1x0c_A 436 TGNSNMTVRNITWSNFRAEGSSSALFRI---------NPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQI 506 (549)
T ss_dssp CBEEEEEEEEEEEEEEEEEEEECCSEEE---------CCSEEEEEEEEEEEEEEEECCGGGTCSCEEECCCBBTTTCCBC
T ss_pred ceEccEEEEeEEEEeEEEeceEEeeecC---------CCCCcCccEEEEEEEEEccccccccccceEEeCCCccccccce
Confidence 78999999999999987 5655443321 13447999999999987654 33455655433 7
Q ss_pred ceecEEEEeEEEEe
Q 042768 358 PCQGIRLQNINLRH 371 (397)
Q Consensus 358 ~i~~i~~~nv~i~~ 371 (397)
+|+||+|+||++..
T Consensus 507 ~v~nI~f~NV~i~G 520 (549)
T 1x0c_A 507 TVTDFSIEGFTVGN 520 (549)
T ss_dssp CEEEEEEEEEEETT
T ss_pred eeeeEEEEeEEEeC
Confidence 89999999999863
No 13
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=3.9e-39 Score=321.18 Aligned_cols=269 Identities=19% Similarity=0.220 Sum_probs=205.1
Q ss_pred CceeEEeeccCccCCCccchHHHHHHHHHHHhhcCCCcEEEEcCcEEEe-cceeecCCCCCcceEEEEcc----EEEeec
Q 042768 29 TTTTYNVLSFGAKGNGVTDSTQAFAKAWAAACASTESATLYVPKGRYLL-GSVAFNGDCKSSDITFRIDG----TLVAPA 103 (397)
Q Consensus 29 ~~~~~~v~dfGA~~dg~tddt~aiq~Ai~~ac~~~~g~~v~~p~G~Y~~-~~l~l~~~~~s~~v~l~~~G----~l~~~~ 103 (397)
+++.++|+||||+|||.+|||+|||+||++ |++|+||+|+|++ ++|.|+ + +++|.+++ +|+++.
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~------Gg~V~iP~GtYlis~~l~l~----s-nv~L~g~g~~~t~L~~~~ 87 (609)
T 3gq8_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES------GFPVYVPYGTFMVSRGIKLP----S-NTVLTGAGKRNAVIRFMD 87 (609)
T ss_dssp CSSSEEGGGGTCCCEEEEECHHHHHHHHHT------SSCEEECSEEEEESSCEEEC----S-SEEEEESCTTTEEEEECT
T ss_pred CCcEEEeEecccCCCCCchhHHHHHHHHHc------CCEEEECCccEEEeCceEEC----C-CcEEEEeeCCCCEEEeCC
Confidence 357899999999999999999999999962 3899999999999 899997 6 89999985 677665
Q ss_pred cccccCCC-cceEEEEeeeceEEeccEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcceEEEEece
Q 042768 104 DYRVLGQA-DNWLSFEGVSGVSIIGGALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQMFHIVINGC 182 (397)
Q Consensus 104 ~~~~~~~~-~~~i~~~~~~nv~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~~~i~~~~~ 182 (397)
+...+... .+++.+.+.+||+|+|++|||+++.||.. .. .....||.+|.|.+|+|++|+++++.++|.+++.+.
T Consensus 88 ~~p~~~~li~~lI~a~~~~NItItG~TIDGNG~~~g~~-~~-~~g~~RP~lI~f~~c~NV~I~gVti~NSp~~gI~I~-- 163 (609)
T 3gq8_A 88 SVGRGESLMYNENVTTGNENIFLSSFTLDGNNKRLGQG-IS-GIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDIT-- 163 (609)
T ss_dssp TCCSSCCSEEESCTTTCCEEEEEEEEEEECCGGGGCSS-CC-CSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEE--
T ss_pred CCCCCCceeeeeeeecccccEEEEeeEEECCccccCcc-cc-cCCCCCccEEEEEeeceEEEEeeEEEeCCCCCeEEe--
Confidence 54333211 12345668899999999999999844432 11 234578999999999999999999999998655443
Q ss_pred ecEEEEeEEEECCCCCCCCCcceeec------eeeEEEEecEEe-cCCeeEEeCCCCeeEEEEeeEEeC------CCeEE
Q 042768 183 KDVHVEGVTVIAPGNSPNTDGIHVQL------SMNVKITNCTIK-TGDDCIPIGPGTKNLWIERVTCGP------GHGIS 249 (397)
Q Consensus 183 ~~v~i~n~~i~~~~~~~~~DGi~~~~------s~nv~I~n~~i~-~~dD~i~i~~~~~ni~i~n~~~~~------~~gi~ 249 (397)
++.+ + ||+++++ |+||+|+||+|+ ++||||++++ ++||+|+||+|.+ ++|++
T Consensus 164 -----------~~~~--N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks-seNI~I~Nc~~~gp~G~S~~~GIs 228 (609)
T 3gq8_A 164 -----------CGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCNGFE 228 (609)
T ss_dssp -----------CSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSCSSCCSEE
T ss_pred -----------CCCC--C-ccccCCCccccccceeEEEEeeEEEecCCCEEEecC-CeeEEEEeEEEECCCCCCCcccEE
Confidence 3322 2 5666665 999999999995 5999999987 9999999999953 36899
Q ss_pred EeeccccCCcCcEEEEEEEeeEEECCcceEEEEeecCCCCceEEcEEEEee-eeccCc-ccEEEEeecCCCCCCCCCCCc
Q 042768 250 IGSLAKDLVEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFIDA-VMRNVQ-FPIVIDQNYCPHNLNCPGQVS 327 (397)
Q Consensus 250 igs~~~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~~~~~~g~v~nI~~~ni-~~~~~~-~~i~i~~~~~~~~~~~~~~~~ 327 (397)
||+. .+||+|+||++.++.+|++||++. +++.++||+++|. .++++. +.++....+... ++.
T Consensus 229 IGsg--------s~NVtV~Nc~i~nt~~GIrIKt~~--~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~------dp~ 292 (609)
T 3gq8_A 229 IDDG--------SRHVVLSNNRSKGCYGGIEIKAHG--DAPAAYNISINGHMSVEDVRSYNFRHIGHHAAT------APQ 292 (609)
T ss_dssp ECTT--------CEEEEEESEEEESSSEEEEEEECT--TSCCCEEEEEEEEEEESCSEEEEEEETTSCSTT------SCC
T ss_pred ccCC--------cccEEEEeeEEECCCCEEEEEecC--CCCccccEEEECCEeecCceEecceEEccccCC------CCC
Confidence 9752 389999999999999999999864 5688999999984 555543 344443333210 112
Q ss_pred ceEEEeEEEEeEEEee
Q 042768 328 GVKISDVIYQDIRGTS 343 (397)
Q Consensus 328 ~~~i~nI~~~ni~~~~ 343 (397)
..+.+||+++|+....
T Consensus 293 s~~a~nV~l~n~~~~~ 308 (609)
T 3gq8_A 293 SVSAKNIVASNLVSIR 308 (609)
T ss_dssp CSSCEEEEEEEEEEES
T ss_pred cceecceEeecceEEe
Confidence 2245777777776543
No 14
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=1.3e-38 Score=320.30 Aligned_cols=266 Identities=13% Similarity=0.124 Sum_probs=214.9
Q ss_pred CCCcEEEEcCcEEEe-------------cceeecCCCCCcceE-EEEc-c-EEEeeccccccCCCcceEEEEeeeceEEe
Q 042768 63 TESATLYVPKGRYLL-------------GSVAFNGDCKSSDIT-FRID-G-TLVAPADYRVLGQADNWLSFEGVSGVSII 126 (397)
Q Consensus 63 ~~g~~v~~p~G~Y~~-------------~~l~l~~~~~s~~v~-l~~~-G-~l~~~~~~~~~~~~~~~i~~~~~~nv~I~ 126 (397)
.+|++||||+|+|++ +++.|+ | +++ |+++ | .|++ ++.+.+++||+|+
T Consensus 229 ~ggg~v~vP~G~yl~~~~~~~gpc~~g~G~i~lk----S-nvt~L~L~~GA~l~g------------~i~~~~~~nv~It 291 (574)
T 1ogo_X 229 GAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLN----S-NTYWVYLAPGAYVKG------------AIEYFTKQNFYAT 291 (574)
T ss_dssp CSSSEEEECSEEEEECBCTTCCBSCSSSCCEECC----T-TCCEEEECTTEEEES------------CEEECCSSCEEEE
T ss_pred CCCCEEEECCcEEEEeccccCCcccccceEEEec----C-CCceEEecCCcEEEc------------cEEEeCceeEEEE
Confidence 578999999999999 568887 6 898 9998 6 4543 3677889999999
Q ss_pred c-cEEecCCCcccccccCC-CCCCCCceeEEEE------ccCCeEEEeeeEecCcceEEEEeceecE--EEEeEEEECCC
Q 042768 127 G-GALDAKGSSLWACKASG-TNCPDGATTLSFT------NSNNIRINGLLSLNSQMFHIVINGCKDV--HVEGVTVIAPG 196 (397)
Q Consensus 127 G-G~idg~g~~~w~~~~~~-~~~~~~~~~i~~~------~~~nv~I~~v~i~~~~~~~i~~~~~~~v--~i~n~~i~~~~ 196 (397)
| |+|||+|..||...... ..+..||.++.|. +|+|++|+|++++|+|.|++++..|+++ +|+|+++.++.
T Consensus 292 G~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~ 371 (574)
T 1ogo_X 292 GHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAF 371 (574)
T ss_dssp SSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCC
T ss_pred eCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCC
Confidence 9 99999999999642211 1234578888887 9999999999999999999999999999 99999998743
Q ss_pred CCCCCCcceeeceeeEEEEecEEecCCeeEEeCCCCeeEEEEeeEEeCC--Ce-EEEeeccccCCcCcEEEEEEEeeEEE
Q 042768 197 NSPNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPG--HG-ISIGSLAKDLVEEGVQNVTVFKTVFT 273 (397)
Q Consensus 197 ~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~--~g-i~igs~~~~~~~~~v~ni~i~n~~~~ 273 (397)
..++|||++. +||+|+||+|.++||||++++ +||+|+||+|+.+ ++ +++||. .+.++||+|+||+|.
T Consensus 372 -~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks--~NI~I~nc~i~~g~g~g~IsIGS~-----~g~V~NV~v~N~~i~ 441 (574)
T 1ogo_X 372 -FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY--SGASVSRATIWKCHNDPIIQMGWT-----SRDISGVTIDTLNVI 441 (574)
T ss_dssp -STTCCCCBCC--TTCEEEEEEEEESSCSEECCS--TTCEEEEEEEEECSSSCSEECCSS-----CCCEEEEEEEEEEEE
T ss_pred -CCCCccCccc--CCEEEEeeEEECCCCEEEECC--ccEEEEeEEEECCCCCceEEEcCC-----CCcEEEEEEEeEEEE
Confidence 2469999998 999999999999999999997 9999999998864 56 999983 578999999999998
Q ss_pred CCcc--------eEEEEeec--------CCCCceEEcEEEEeeeeccCcccEEEEeecCCCCCCCCCCCcceEEEeEEEE
Q 042768 274 GTTN--------GFRIKSWA--------RPSNGFVQGVRFIDAVMRNVQFPIVIDQNYCPHNLNCPGQVSGVKISDVIYQ 337 (397)
Q Consensus 274 ~~~~--------gi~i~s~~--------~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ 337 (397)
++.. +..+.+.. ..+.+ | ||+|+||+++++..++ +.. + +..+|+||+|+
T Consensus 442 ~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~g-V-NI~f~NI~~~~v~~~i-i~i-~-----------p~~~I~nI~~~ 506 (574)
T 1ogo_X 442 HTRYIKSETVVPSAIIGASPFYASGMSPDSRKS-I-SMTVSNVVCEGLCPSL-FRI-T-----------PLQNYKNFVVK 506 (574)
T ss_dssp ECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEE-E-EEEEEEEEECSSBCEE-EEE-C-----------CSEEEEEEEEE
T ss_pred CCcccceeccccceeeccccccccccccCCCce-E-EEEEEeEEEEceeEee-EEE-C-----------CCCCEEEEEEE
Confidence 8653 33322210 00234 8 9999999999998885 333 1 23479999999
Q ss_pred eEEEee------cCCceEEEecCCCCceecEEEEeEEEEe
Q 042768 338 DIRGTS------ATPIAIKFDCSPKYPCQGIRLQNINLRH 371 (397)
Q Consensus 338 ni~~~~------~~~~~~~i~~~~~~~i~~i~~~nv~i~~ 371 (397)
||++++ ....+..+.|.+ .+|+||+|+||++..
T Consensus 507 NI~i~g~~~~~~~~~~~~~i~G~~-~~v~nI~~~NV~i~g 545 (574)
T 1ogo_X 507 NVAFPDGLQTNSIGTGESIIPAAS-GLTMGLAISAWTIGG 545 (574)
T ss_dssp EEEETTCBCCSTTCTTCEEECCCT-TCCEEEEEEEEEETT
T ss_pred eEEEeCccccccccccceeEecCC-CccceEEEEeEEEeC
Confidence 999875 223345666766 899999999999953
No 15
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=7.3e-39 Score=323.65 Aligned_cols=269 Identities=18% Similarity=0.215 Sum_probs=203.5
Q ss_pred CceeEEeeccCccCCCccchHHHHHHHHHHHhhcCCCcEEEEcCcEEEe-cceeecCCCCCcceEEEEcc----EEEeec
Q 042768 29 TTTTYNVLSFGAKGNGVTDSTQAFAKAWAAACASTESATLYVPKGRYLL-GSVAFNGDCKSSDITFRIDG----TLVAPA 103 (397)
Q Consensus 29 ~~~~~~v~dfGA~~dg~tddt~aiq~Ai~~ac~~~~g~~v~~p~G~Y~~-~~l~l~~~~~s~~v~l~~~G----~l~~~~ 103 (397)
++..++|+||||+|||++|||+|||+||++ |++|+||+|+|++ ++|.|+ + +++|.+++ +|+++.
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a------Gg~V~IPaGtYlisg~I~L~----s-nv~L~Geg~~~t~Lk~~~ 87 (772)
T 3gqn_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES------GFPVYVPYGTFMVSRGIKLP----S-NTVLTGAGKRNAVIRFMD 87 (772)
T ss_dssp CSSSEESGGGTCCCEEEEECHHHHHHHHHT------TSCEEECSEEEEESSCEEEC----S-SCEEEEEEEEEEEEEECT
T ss_pred CCcEEEeEecccCCCCChhHHHHHHHHHHc------CCEEEECCccEEEEeEEEEC----C-CcEEEEecCCCCEEEeCC
Confidence 356899999999999999999999999962 2899999999999 899998 6 89999885 566655
Q ss_pred cccccCCC-cceEEEEeeeceEEeccEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcceEEEEece
Q 042768 104 DYRVLGQA-DNWLSFEGVSGVSIIGGALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQMFHIVINGC 182 (397)
Q Consensus 104 ~~~~~~~~-~~~i~~~~~~nv~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~~~i~~~~~ 182 (397)
+...+... .+|+.+.+++||+|+|++|||+++.||.... .....+|.+|.|.+|+|++|+++++.++|.+++.
T Consensus 88 d~p~~~~li~~lI~a~gveNItItG~TIDGNG~~~g~~~~--~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~gI~---- 161 (772)
T 3gqn_A 88 SVGRGESLMYNENVTTGNENIFLSSFTLDGNNKRLGQGIS--GIGGSRESNLSIRACHNVYIRDIEAVDCTLHGID---- 161 (772)
T ss_dssp TCCSSCCSEEESCTTTCCEEEEEEEEEEECCGGGGCSSCC--CSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEE----
T ss_pred CCCCCCceeeeeeeccCceeEEEEeeEEeCCccccCcccc--cCCCCCccEEEEEeeceEEEEeEEEEeCCCCCEE----
Confidence 54333211 1334567899999999999999984443111 2345789999999999999999999999986544
Q ss_pred ecEEEEeEEEECCCCCCCCCcceeec------eeeEEEEecEEec-CCeeEEeCCCCeeEEEEeeEEeC------CCeEE
Q 042768 183 KDVHVEGVTVIAPGNSPNTDGIHVQL------SMNVKITNCTIKT-GDDCIPIGPGTKNLWIERVTCGP------GHGIS 249 (397)
Q Consensus 183 ~~v~i~n~~i~~~~~~~~~DGi~~~~------s~nv~I~n~~i~~-~dD~i~i~~~~~ni~i~n~~~~~------~~gi~ 249 (397)
|.++.+ | ||+++++ |+||+|+||+|++ +||||++++ ++||+|+||+|.+ ++|++
T Consensus 162 ---------I~np~~--N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks-SeNI~I~Nc~c~gphG~S~~~GIs 228 (772)
T 3gqn_A 162 ---------ITCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCNGFE 228 (772)
T ss_dssp ---------EECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSSSSCCSEE
T ss_pred ---------EeCCCc--C-CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC-CceEEEEeEEEECCCCCCCcccEE
Confidence 444332 2 5666665 9999999999954 999999987 9999999999954 36899
Q ss_pred EeeccccCCcCcEEEEEEEeeEEECCcceEEEEeecCCCCceEEcEEEEe-eeeccCc-ccEEEEeecCCCCCCCCCCCc
Q 042768 250 IGSLAKDLVEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFID-AVMRNVQ-FPIVIDQNYCPHNLNCPGQVS 327 (397)
Q Consensus 250 igs~~~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~~~~~~g~v~nI~~~n-i~~~~~~-~~i~i~~~~~~~~~~~~~~~~ 327 (397)
||+. .+||+|+||++.++.+|++||++. +++.++||++.| +.+++.. +.++....+.. .++.
T Consensus 229 IGsg--------s~NVtV~Nc~~~nT~nGIRIKt~~--~gg~v~NV~I~gnis~~dvrsynir~iG~h~a------~dp~ 292 (772)
T 3gqn_A 229 IDDG--------SRHVVLSNNRSKGCYGGIEIKAHG--DAPAAYNISINGHMSVEDVRSYNFRHIGHHAA------TAPQ 292 (772)
T ss_dssp ECTT--------CEEEEEEEEEEESSSEEEEECCCT--TSCCCEEEEEEEEEEESCSEEEEECCTTSCSS------SSCC
T ss_pred ecCC--------cccEEEEceEEECCCcEEEEEEeC--CCCccccEEEECCEEeccCeEecceEEccccC------CCCC
Confidence 9752 389999999999999999999763 578899999985 7776643 23332222211 0111
Q ss_pred ceEEEeEEEEeEEEee
Q 042768 328 GVKISDVIYQDIRGTS 343 (397)
Q Consensus 328 ~~~i~nI~~~ni~~~~ 343 (397)
..+..||.++|+....
T Consensus 293 s~~a~nV~l~n~~~~~ 308 (772)
T 3gqn_A 293 SVSAKNIVASNLVSIR 308 (772)
T ss_dssp CSSCEEEEEEEEEEES
T ss_pred CccCccEEeecceEEc
Confidence 2245777777776543
No 16
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=5.4e-38 Score=309.15 Aligned_cols=297 Identities=15% Similarity=0.171 Sum_probs=222.1
Q ss_pred cCceeEE-eeccCccCCCccchHHHHHHHHHHHhhcC-CCcEEEEcCcEEEecceeecCCCCCcceEEEEc-c-EEEeec
Q 042768 28 ATTTTYN-VLSFGAKGNGVTDSTQAFAKAWAAACAST-ESATLYVPKGRYLLGSVAFNGDCKSSDITFRID-G-TLVAPA 103 (397)
Q Consensus 28 a~~~~~~-v~dfGA~~dg~tddt~aiq~Ai~~ac~~~-~g~~v~~p~G~Y~~~~l~l~~~~~s~~v~l~~~-G-~l~~~~ 103 (397)
.+...++ |++|||+|||.+|||+|||+||++ |++. ++++|+||+|+|+++++.|+ | +++|+++ | +|+++.
T Consensus 17 ~~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aida-c~~~~ggg~V~vP~GtYl~g~I~lk----s-~v~L~l~~GatL~~s~ 90 (464)
T 1h80_A 17 QQDVNYDLVDDFGANGNDTSDDSNALQRAINA-ISRKPNGGTLLIPNGTYHFLGIQMK----S-NVHIRVESDVIIKPTW 90 (464)
T ss_dssp CCSEEEEHHHHHCCCTTSSSBCHHHHHHHHHH-HHTSTTCEEEEECSSEEEECSEECC----T-TEEEEECTTCEEEECC
T ss_pred CCcceeeehhccCcCCCCCchhHHHHHHHHHH-HhhccCCcEEEECCCeEEEeeEecc----C-ceEEEEcCCcEEEecc
Confidence 3456888 999999999999999999999964 6766 78999999999999999997 6 9999998 4 888876
Q ss_pred c--ccccCCCcceEEE---EeeeceEEec-c---EEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcc
Q 042768 104 D--YRVLGQADNWLSF---EGVSGVSIIG-G---ALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQM 174 (397)
Q Consensus 104 ~--~~~~~~~~~~i~~---~~~~nv~I~G-G---~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~ 174 (397)
+ ...|+ ++.+ .+++|++|.| | +|||+|.. ..+|+++.|.+|+|++|+++++.+ .
T Consensus 91 ~td~~~y~----~~~~~~~~~~~nItI~G~Gg~~~iDG~G~~-----------~~rp~~i~~~~~~Nv~I~gIti~n--~ 153 (464)
T 1h80_A 91 NGDGKNHR----LFEVGVNNIVRNFSFQGLGNGFLVDFKDSR-----------DKNLAVFKLGDVRNYKISNFTIDD--N 153 (464)
T ss_dssp CTTCSCEE----EEEESSSSCEEEEEEEECTTCEEEECTTCS-----------CCBEEEEEECSEEEEEEEEEEEEC--C
T ss_pred CCCcccCC----ceEeecccCccceEEECcCcceEEeCCCCC-----------CCCceEEEEEeeccEEEeeeEEec--c
Confidence 3 44432 3333 5789999999 8 88888752 347899999999999999999999 4
Q ss_pred eEEEEeceecEEEEeEEEECCCCCCCCCcceeeceeeEEEEecEEecCCeeEE--eCCCCeeEEEEeeEEeCCCeEEEee
Q 042768 175 FHIVINGCKDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKTGDDCIP--IGPGTKNLWIERVTCGPGHGISIGS 252 (397)
Q Consensus 175 ~~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~--i~~~~~ni~i~n~~~~~~~gi~igs 252 (397)
|.++ .+.++.+ .++||+++ .|+||+|+||+|.++||++. ...+++||+|+||+|.+++|++|.+
T Consensus 154 w~ih--~s~~V~i-----------~NtDGi~i-~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~gg~GIrIkt 219 (464)
T 1h80_A 154 KTIF--ASILVDV-----------TERNGRLH-WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSEGGIALRMET 219 (464)
T ss_dssp SCBS--CSEEECE-----------EEETTEEE-EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEESSEEEEEEC
T ss_pred ceEe--eceeeee-----------ecCCCcee-eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEECCCEEEEEe
Confidence 5433 3333322 25799998 78999999999999998775 2335899999999999988898865
Q ss_pred c----cccCCcCcEEEEEEEeeEEECCcceEEEEeecCCCCceEEcEEEEeeeeccCcccEEEEeecCCCCCCCCCCCcc
Q 042768 253 L----AKDLVEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFIDAVMRNVQFPIVIDQNYCPHNLNCPGQVSG 328 (397)
Q Consensus 253 ~----~~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~ 328 (397)
. +.. ..+.++||+|+||+|.+...++.|++. .+.++||+|+||++.++..++.|.+.|++.... ..
T Consensus 220 g~d~IG~~-~~g~v~NI~~~Ni~~~nv~~~I~I~p~----~~~isnItfeNI~~t~~~~aI~i~q~y~~~fd~-----~~ 289 (464)
T 1h80_A 220 DNLLMKNY-KQGGIRNIFADNIRCSKGLAAVMFGPH----FMKNGDVQVTNVSSVSCGSAVRSDSGFVELFSP-----TD 289 (464)
T ss_dssp CCHHHHHH-TCCEEEEEEEEEEEEESSSEEEEEECT----TCBCCCEEEEEEEEESSSCSEEECCCCCEECC--------
T ss_pred CCceeccC-CCCcEEEEEEEeEEEECCceeEEEeCC----CceEeEEEEEEEEEEccceeEEEecCcccccCc-----cc
Confidence 3 011 346799999999999999999999853 357899999999999999999999988754221 22
Q ss_pred eEEEeEEEEeEE------Eee---------cCCceEEEecC-------------CCCceecEEEEeEEEEe
Q 042768 329 VKISDVIYQDIR------GTS---------ATPIAIKFDCS-------------PKYPCQGIRLQNINLRH 371 (397)
Q Consensus 329 ~~i~nI~~~ni~------~~~---------~~~~~~~i~~~-------------~~~~i~~i~~~nv~i~~ 371 (397)
....+.+|+|.. +.. ....++.+.|. +....++++++||+++.
T Consensus 290 ~~~~~~~~~~~~e~~~~~G~~~~~~~~~ng~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~nv~~~~ 360 (464)
T 1h80_A 290 EVHTRQSWKQAVESKLGRGCAQTPYARGNGGTRWAARVTQKDACLDKAKLEYGIEPGSFGTVKVFDVTARF 360 (464)
T ss_dssp ------------------CCBCCC----------CEEBCSCHHHHHHHHHHTCCCCCBCSSEEEEEEEEEC
T ss_pred cccccceeccccccccccCceeEEEeccCCcccCceEEccccceeccccccccccCCceEEEEEEEEEecc
Confidence 245566666554 111 11235566554 55577899999999976
No 17
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.97 E-value=2.1e-32 Score=257.81 Aligned_cols=209 Identities=17% Similarity=0.261 Sum_probs=162.3
Q ss_pred eeEEeeccCccCCCccchHHHHHHHHHHHhhcCCCcEEEEcCc----EEEec-ceeecCCCCCcceEEEEcc--EEEeec
Q 042768 31 TTYNVLSFGAKGNGVTDSTQAFAKAWAAACASTESATLYVPKG----RYLLG-SVAFNGDCKSSDITFRIDG--TLVAPA 103 (397)
Q Consensus 31 ~~~~v~dfGA~~dg~tddt~aiq~Ai~~ac~~~~g~~v~~p~G----~Y~~~-~l~l~~~~~s~~v~l~~~G--~l~~~~ 103 (397)
..+||+||||+|||++|||+|||+||++||+.++|++|+||+| +|+++ ++.|+ + +++|.+++ ++.++.
T Consensus 50 ~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~GGGtVyVPaG~~~~tYlvt~tI~Lk----S-nV~L~Ge~~AtIl~s~ 124 (514)
T 2vbk_A 50 EAISILDFGVIDDGVTDNYQAIQNAIDAVASLPSGGELFIPASNQAVGYIVGSTLLIP----G-GVNIRGVGKASQLRAK 124 (514)
T ss_dssp TCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTSTTCEEEECCCCSSTTCEEESSCEEEC----T-TEEEECCSTTSEEEEC
T ss_pred cEEEeeccCcCCCCCcccHHHHHHHHHHHhhcCCCeEEEECCCCcceeEEECCeEEec----C-CeEEEEecCceEeecc
Confidence 5799999999999999999999999998877668999999999 99885 68887 6 99999984 454322
Q ss_pred cc-cc-c--CCCcceEEEEeeeceEEec-cEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeE--ecCcceE
Q 042768 104 DY-RV-L--GQADNWLSFEGVSGVSIIG-GALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLS--LNSQMFH 176 (397)
Q Consensus 104 ~~-~~-~--~~~~~~i~~~~~~nv~I~G-G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i--~~~~~~~ 176 (397)
.. .. . +.-.+++.+.+.+||+|+| |+|||++..|+.... ..+++..+ .++++.+++++. ..++.|.
T Consensus 125 ~~I~GtIia~~y~s~I~~~~VeNIaITG~GTIDG~g~n~t~e~~----~~Rq~~~~---~fdnV~Vn~Vt~~v~~Sg~WT 197 (514)
T 2vbk_A 125 SGLTGSVLRLSYDSDTIGRYLRNIRVTGNNTCNGIDTNITAEDS----VIRQVYGW---VFDNVMVNEVETAYLMQGLWH 197 (514)
T ss_dssp TTCCSEEEEECCCSCCSCEEEESCEEECCSSSEEEEESCCTTCS----SCCCEESE---EEESCEEEEEEEEEEEESEEE
T ss_pred ccccccEEeccCCccccccCceEEEEECCCeEeCCCCCccccce----eeeccceE---EeeeEEEEeEEEeEeccCcEE
Confidence 11 00 0 0002456677899999999 999997765422110 01122223 367999999965 4788999
Q ss_pred EEEeceecEEEE-eEEEECCCCCCCCCcceeeceeeEEEEecEEecCCeeEEeCCC-----------CeeEEEEeeEEeC
Q 042768 177 IVINGCKDVHVE-GVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPG-----------TKNLWIERVTCGP 244 (397)
Q Consensus 177 i~~~~~~~v~i~-n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~-----------~~ni~i~n~~~~~ 244 (397)
+++..|++++++ ++++. ++|+||+|.||+|..|||||++|++ ++|+.
T Consensus 198 IhPi~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~-------- 256 (514)
T 2vbk_A 198 SKFIACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR-------- 256 (514)
T ss_dssp EEEESCEEEEEEEEEEEE-------------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC--------
T ss_pred EeEeccCceecccCcccc-------------CCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc--------
Confidence 999999999988 66664 2799999999999999999999985 56666
Q ss_pred CCe-EEEeeccccCCcCcEEE-EEEEeeEEECCc
Q 042768 245 GHG-ISIGSLAKDLVEEGVQN-VTVFKTVFTGTT 276 (397)
Q Consensus 245 ~~g-i~igs~~~~~~~~~v~n-i~i~n~~~~~~~ 276 (397)
|| +.+|||. +.++++| +++++|.|.+++
T Consensus 257 -hgav~igSE~---m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 257 -SEAIILDSET---MCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp -CEEEEEESSE---EEESCSEEEEESCCEEEEEE
T ss_pred -cccEEECchh---hcccccccEEEEeeeccCCc
Confidence 76 9999974 4578999 999999999874
No 18
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.97 E-value=5.5e-30 Score=249.89 Aligned_cols=304 Identities=14% Similarity=0.152 Sum_probs=182.9
Q ss_pred eEEeeccCccCCCccchHHHHHHHHHHHhhcCCCcEEEEcCcEEEec--------ceeecCCCCCcceEEEEcc----EE
Q 042768 32 TYNVLSFGAKGNGVTDSTQAFAKAWAAACASTESATLYVPKGRYLLG--------SVAFNGDCKSSDITFRIDG----TL 99 (397)
Q Consensus 32 ~~~v~dfGA~~dg~tddt~aiq~Ai~~ac~~~~g~~v~~p~G~Y~~~--------~l~l~~~~~s~~v~l~~~G----~l 99 (397)
.++|+||||+|||++|||+|||+||++||+ .+|++|+||||+|++. ++.++ + +++|+++| +|
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~-~gg~~v~~p~G~y~~~~~~~~~~g~l~~~----~-~v~l~g~g~~~t~l 75 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYA-AGGGTVYLPAGEYRVSAAGEPGDGCLMLK----D-GVYLAGAGMGETVI 75 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHH-TTSEEEEECSEEEEECCCSSGGGCSEECC----T-TEEEEESSBTTEEE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHh-cCCCEEEECCeEEEEcccccCCcccEEec----C-CeEEEEcCCCCcEE
Confidence 589999999999999999999999988744 5789999999999984 68886 6 99999985 44
Q ss_pred EeeccccccCCC------cceEEEEeeeceEEec------cEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEee
Q 042768 100 VAPADYRVLGQA------DNWLSFEGVSGVSIIG------GALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGL 167 (397)
Q Consensus 100 ~~~~~~~~~~~~------~~~i~~~~~~nv~I~G------G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v 167 (397)
++..+...++.. +.-....+.+|++|.| |+++| ||.....+ .+.+|++++|+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~I~G~~~~~~G~idG----w~~~~~~~----------~~~~~~nv~I~~~ 141 (377)
T 2pyg_A 76 KLIDGSDQKITGMVRSAYGEETSNFGMRDLTLDGNRDNTSGKVDG----WFNGYIPG----------GDGADRDVTIERV 141 (377)
T ss_dssp EECTTCBSCEEEEEECCTTSCCEEEEEEEEEEECCGGGCBSCEEE----EEECSCTT----------SSCCEEEEEEEEE
T ss_pred EecCCCccCccceEeccCCCcceEEEEEEEEEECCCccCCccccc----eecccCcc----------ccccccceEEEeE
Confidence 555433322110 1011334688999998 45665 88643211 1246899999999
Q ss_pred eEecCcceEEEEecee-cEEEEeEEEECCCCCCCCCcceeeceeeEEEEecE-EecCCeeEEeCCCCeeEEEEeeEEeCC
Q 042768 168 LSLNSQMFHIVINGCK-DVHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCT-IKTGDDCIPIGPGTKNLWIERVTCGPG 245 (397)
Q Consensus 168 ~i~~~~~~~i~~~~~~-~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~-i~~~dD~i~i~~~~~ni~i~n~~~~~~ 245 (397)
++++++.|++++..|. +++++|+.+.. ...|||.+..|++++|++|. +...+|||.+..++++++|+||++...
T Consensus 142 ~i~n~~~~gi~~~~~~~~~~i~n~~~~~----~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~~ 217 (377)
T 2pyg_A 142 EVREMSGYGFDPHEQTINLTIRDSVAHD----NGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYGN 217 (377)
T ss_dssp EEECCSSCSEEECSSEEEEEEESCEEES----CSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESC
T ss_pred EEEecccceEEeecccCCeEEEeEEeec----CCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEECc
Confidence 9999999999998765 78888888865 35566666666666666663 333566666555566666666666543
Q ss_pred -CeEEEeeccccCCcCc-----------------------EEEEEEEeeEEECC-cceEEEEeecCCCCceEEcEEEEee
Q 042768 246 -HGISIGSLAKDLVEEG-----------------------VQNVTVFKTVFTGT-TNGFRIKSWARPSNGFVQGVRFIDA 300 (397)
Q Consensus 246 -~gi~igs~~~~~~~~~-----------------------v~ni~i~n~~~~~~-~~gi~i~s~~~~~~g~v~nI~~~ni 300 (397)
.++.+-..+.. .... +++++|+|+++.++ ..|++++. +++++|+|+
T Consensus 218 ~~g~~~~~~g~~-~~~~s~nv~i~~N~~~~n~~~Gi~~~~~~~v~i~~N~i~~~~~~GI~i~g--------~~~~~i~~N 288 (377)
T 2pyg_A 218 GSSGLVVQRGLE-DLALPSNILIDGGAYYDNAREGVLLKMTSDITLQNADIHGNGSSGVRVYG--------AQDVQILDN 288 (377)
T ss_dssp SSCSEEEECCSS-CCCCCEEEEEESCEEESCSSCSEEEEEEEEEEEESCEEESCSSCSEEEEE--------EEEEEEESC
T ss_pred cCceEEEecccc-CCCCCccEEEECCEEEcCccCceEeccccCeEEECCEEECCCCceEEEec--------CCCcEEECc
Confidence 23333110000 1122 44555555555554 45555542 455666666
Q ss_pred eeccCcc----cEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeecCCceEEEecCCCCceecEEEEeEEEEeC
Q 042768 301 VMRNVQF----PIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTSATPIAIKFDCSPKYPCQGIRLQNINLRHL 372 (397)
Q Consensus 301 ~~~~~~~----~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~~~~~~i~~i~~~nv~i~~~ 372 (397)
++.+... +..+.+.|....... .....-+++++++.++.+....+.-+.... ..+++++++|..+...
T Consensus 289 ~i~~n~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~~~i~~N~i~g~~~~~~~i~~~~-~~~~~~~i~~n~i~~~ 360 (377)
T 2pyg_A 289 QIHDNAQAAAVPEVLLQSFDDTAGAS---GTYYTTLNTRIEGNTISGSANSTYGIQERN-DGTDYSSLIDNDIAGV 360 (377)
T ss_dssp EEESCCSSSSCCSEEEECEEETTSSS---CEEECCBCCEEESCEEECCSSCCEEEEECS-SSCBCCEEESCEEESS
T ss_pred EEECCcccccccceEEEEecCCCccc---eeeeeccCeEEECCEEECcCCCccceEEcc-CCCccEEEECcEEeCC
Confidence 6654322 122222222110000 000012566677776666555433332221 3456677777666543
No 19
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.92 E-value=8.5e-24 Score=208.41 Aligned_cols=228 Identities=13% Similarity=0.168 Sum_probs=178.0
Q ss_pred ceEEEEeeeceEEeccEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecC--cceEEEEeceecEEEEeE
Q 042768 113 NWLSFEGVSGVSIIGGALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNS--QMFHIVINGCKDVHVEGV 190 (397)
Q Consensus 113 ~~i~~~~~~nv~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~--~~~~i~~~~~~~v~i~n~ 190 (397)
.++.+.+++|++|+|-++... +.| .+++.+|+|++|+++++.++ ...++++..|+||+|+|+
T Consensus 191 ~~i~~~~~~nv~i~giti~ns--p~~--------------~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~ 254 (448)
T 3jur_A 191 SFVQFYRCRNVLVEGVKIINS--PMW--------------CIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKC 254 (448)
T ss_dssp CSEEEESCEEEEEESCEEESC--SSC--------------SEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESC
T ss_pred eEEEEEcccceEEEeeEEEeC--CCc--------------eEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEEee
Confidence 468999999999999444311 122 49999999999999999875 346899999999999999
Q ss_pred EEECCCC------CCCCCcceee-ceeeEEEEecEE--ecCCeeEEeCCC----CeeEEEEeeEEeCC-CeEEEeecccc
Q 042768 191 TVIAPGN------SPNTDGIHVQ-LSMNVKITNCTI--KTGDDCIPIGPG----TKNLWIERVTCGPG-HGISIGSLAKD 256 (397)
Q Consensus 191 ~i~~~~~------~~~~DGi~~~-~s~nv~I~n~~i--~~~dD~i~i~~~----~~ni~i~n~~~~~~-~gi~igs~~~~ 256 (397)
+|.+.++ ..+.||+++. .|+||+|+||.+ ..+++||++++. .+||+|+||++.+. +|++|++...+
T Consensus 255 ~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt~~g~ 334 (448)
T 3jur_A 255 RFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSRR 334 (448)
T ss_dssp EEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEECCTTT
T ss_pred EEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecccceEEEEEEcCC
Confidence 9998543 1223333333 279999999999 456679999874 59999999999876 69999986432
Q ss_pred CCcCcEEEEEEEeeEEECCcceE-EEEeecC----CCCceEEcEEEEeeeeccCcccEEEEeecCCCCCCCCCCCcceEE
Q 042768 257 LVEEGVQNVTVFKTVFTGTTNGF-RIKSWAR----PSNGFVQGVRFIDAVMRNVQFPIVIDQNYCPHNLNCPGQVSGVKI 331 (397)
Q Consensus 257 ~~~~~v~ni~i~n~~~~~~~~gi-~i~s~~~----~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i 331 (397)
.+.++||+|+|++|.+..+++ .|...+. ...+.++||+|+||+.++...++.|... +..++
T Consensus 335 --gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~------------~~~p~ 400 (448)
T 3jur_A 335 --GGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGL------------ENDYV 400 (448)
T ss_dssp --CSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEECSEEEEEECB------------TTBCE
T ss_pred --CceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEecceEEEEEeC------------CCCCE
Confidence 367999999999999998888 8877543 2356899999999999987778887642 22379
Q ss_pred EeEEEEeEEEeecCCceEEEec----CCCCceecEEEEeEEEEe
Q 042768 332 SDVIYQDIRGTSATPIAIKFDC----SPKYPCQGIRLQNINLRH 371 (397)
Q Consensus 332 ~nI~~~ni~~~~~~~~~~~i~~----~~~~~i~~i~~~nv~i~~ 371 (397)
+||+|+||+++.... +..+.. .....++|++|+||+|..
T Consensus 401 ~~I~~~nv~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~nv~ing 443 (448)
T 3jur_A 401 KDILISDTIIEGAKI-SVLLEFGQLGMENVIMNGSRFEKLYIEG 443 (448)
T ss_dssp EEEEEEEEEEESCSE-EEEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred eeEEEEEEEEEcccc-ceeEeccccccccceecccEEEEEEEcC
Confidence 999999999987653 444442 344568999999999974
No 20
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.92 E-value=1.1e-23 Score=213.39 Aligned_cols=262 Identities=18% Similarity=0.192 Sum_probs=191.0
Q ss_pred eeEEeeccCccCCCccchHHHHHHHHHHHhhcCCC---------cEEEEcCcEEEec-ceeecCCCCCcceEEEEcc---
Q 042768 31 TTYNVLSFGAKGNGVTDSTQAFAKAWAAACASTES---------ATLYVPKGRYLLG-SVAFNGDCKSSDITFRIDG--- 97 (397)
Q Consensus 31 ~~~~v~dfGA~~dg~tddt~aiq~Ai~~ac~~~~g---------~~v~~p~G~Y~~~-~l~l~~~~~s~~v~l~~~G--- 97 (397)
..+||+||||+|||++|||+|||+||+++ ++.++ ++||||+|+|++. +|.++ + ++.|.+++
T Consensus 48 v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a-~~~Gggc~~st~~~~~V~~P~GtYlvs~tI~l~----~-~t~L~G~~~~~ 121 (758)
T 3eqn_A 48 VFRNVKNYGAKGDGNTDDTAAIQAAINAG-GRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVL----Y-QTQLIGDAKNL 121 (758)
T ss_dssp SEEEGGGGTCCCEEEEECHHHHHHHHHTT-SCSCTTCCCCSSSCEEEEECSSEEEESSCEECC----T-TEEEEECSSSC
T ss_pred EEEEHHHcCcCCCCCchhHHHHHHHHHHh-hhcccccccccccceEEEECCceEEEcccEEcc----C-CeEEEecCCCC
Confidence 36799999999999999999999999864 44333 6999999999975 78887 6 89999985
Q ss_pred -EEEeeccccccCCCcceEEEEeeeceEEeccEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcceE
Q 042768 98 -TLVAPADYRVLGQADNWLSFEGVSGVSIIGGALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQMFH 176 (397)
Q Consensus 98 -~l~~~~~~~~~~~~~~~i~~~~~~nv~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~~~ 176 (397)
+|++.+.+.. ..+ |.+...+++|..||.... ..+..++|+.|+ ++-.++...+
T Consensus 122 pvIka~~~F~G----~~l----------i~~d~y~~~G~~w~~~~~-----------~F~r~irNlviD-~t~~~~~~~g 175 (758)
T 3eqn_A 122 PTLLAAPNFSG----IAL----------IDADPYLAGGAQYYVNQN-----------NFFRSVRNFVID-LRQVSGSATG 175 (758)
T ss_dssp CEEEECTTCCS----SCS----------EESSCBCGGGCBSSCGGG-----------CCCEEEEEEEEE-CTTCSSCEEE
T ss_pred CeEecCCCCCC----cce----------eeccccCCCCcccccccc-----------ceeeeecceEEe-ccccCCCceE
Confidence 6766443221 111 233334466777774322 334556777777 5556666789
Q ss_pred EEEeceecEEEEeEEEECCCCCC-CCCcceeeceeeEEEEecEEecCCeeEEeCCCCeeEEEEeeEEeCCC-eEEEeecc
Q 042768 177 IVINGCKDVHVEGVTVIAPGNSP-NTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGH-GISIGSLA 254 (397)
Q Consensus 177 i~~~~~~~v~i~n~~i~~~~~~~-~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~~ 254 (397)
|++..+++..++||.|+.+..+. .++||+++.++.+.|+|++|..|+-++.++. +..+++|.+|.++. +|.+...
T Consensus 176 Ihw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~gn--QQfT~rnltF~~~~taI~~~w~- 252 (758)
T 3eqn_A 176 IHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFGN--QQFTVRNLTFNNANTAINAIWN- 252 (758)
T ss_dssp EECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEEC--SCCEEEEEEEESCSEEEEEEEB-
T ss_pred EEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcCC--cceEEeccEEeChHHHHhhhcC-
Confidence 99999999999999999986653 4899999988899999999999999988864 78888888888764 6665332
Q ss_pred ccCCcCcEEEEEEEeeEEECCcceEEEEeecCC--CCceEEcEEEEeeeeccCcccEEEEeecCCCCCCCCCCCcceEEE
Q 042768 255 KDLVEEGVQNVTVFKTVFTGTTNGFRIKSWARP--SNGFVQGVRFIDAVMRNVQFPIVIDQNYCPHNLNCPGQVSGVKIS 332 (397)
Q Consensus 255 ~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~~~~--~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ 332 (397)
-..+++++++.++..||.+...... ....+..|.+.|.+++++..+|... +.... .......++
T Consensus 253 --------wgwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~~~i~t~--~~~~~----~~~~slvle 318 (758)
T 3eqn_A 253 --------WGWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTFVRWS--GASSG----HLQGSLVLN 318 (758)
T ss_dssp --------SCEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCSEEEEES--SCCCS----SCSSEEEEE
T ss_pred --------ceEEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEcccceEEec--cCCCC----CCcceEEEE
Confidence 1378888888888889988652110 1235778999999999887555433 22211 112347789
Q ss_pred eEEEEeEEE
Q 042768 333 DVIYQDIRG 341 (397)
Q Consensus 333 nI~~~ni~~ 341 (397)
||.++|+..
T Consensus 319 Nv~~~nv~~ 327 (758)
T 3eqn_A 319 NIQLTNVPV 327 (758)
T ss_dssp EEEEEEEEE
T ss_pred eEEeeCCCe
Confidence 999888754
No 21
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.88 E-value=3.2e-20 Score=177.34 Aligned_cols=202 Identities=21% Similarity=0.280 Sum_probs=163.5
Q ss_pred eEEEEccCCeEEEee---eEecCc--ce-------------EEEEeceecEEEEeEEEECCCCCCCCCcceeeceeeEEE
Q 042768 153 TLSFTNSNNIRINGL---LSLNSQ--MF-------------HIVINGCKDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKI 214 (397)
Q Consensus 153 ~i~~~~~~nv~I~~v---~i~~~~--~~-------------~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I 214 (397)
++.+.. +|++|++. +|.... .| .+.+..|++++|+++++.+++ ..+|++..|+||+|
T Consensus 66 li~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~~~~nv~i 140 (339)
T 1ia5_A 66 LISVSG-SDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSP----VQVFSVAGSDYLTL 140 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEEc-CcEEEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCC----cceEEEecccCeEE
Confidence 566655 99999997 664332 22 488999999999999999953 46899999999999
Q ss_pred EecEEecC---------CeeEEeCCCCeeEEEEeeEEeCCC-eEEEeeccccCCcCcEEEEEEEeeEEECCcceEEEEee
Q 042768 215 TNCTIKTG---------DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDLVEEGVQNVTVFKTVFTGTTNGFRIKSW 284 (397)
Q Consensus 215 ~n~~i~~~---------dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~ 284 (397)
+|+++.+. .|+|.+.+ ++||+|+||++..++ ++++++. +||+|+||++.+. +|+.|.|.
T Consensus 141 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~ 209 (339)
T 1ia5_A 141 KDITIDNSDGDDNGGHNTDAFDIGT-STYVTISGATVYNQDDCVAVNSG---------ENIYFSGGYCSGG-HGLSIGSV 209 (339)
T ss_dssp ESCEEECGGGTTTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-SCEEEEEE
T ss_pred eeEEEECCccccccCCCCCcEEecC-CceEEEEeeEEEcCCCeEEEeCC---------eEEEEEeEEEECC-ceEEECcC
Confidence 99999862 57898887 999999999999875 6999762 7999999999986 68999986
Q ss_pred cCCCCceEEcEEEEeeeeccCcccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeecCCceEEEec-------CC--
Q 042768 285 ARPSNGFVQGVRFIDAVMRNVQFPIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTSATPIAIKFDC-------SP-- 355 (397)
Q Consensus 285 ~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~-------~~-- 355 (397)
.....+.++||+|+|+++.+..++++|+.+.. +.+.++||+|+||++.....+++.+.. .+
T Consensus 210 g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~p~~ 279 (339)
T 1ia5_A 210 GGRSDNTVKNVTFVDSTIINSDNGVRIKTNID----------TTGSVSDVTYKDITLTSIAKYGIVVQQNYGDTSSTPTT 279 (339)
T ss_dssp CSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEETCTTSCCCS
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCcEEEeeEEEEEEEECcccccEEEEccCCCCCCCCcC
Confidence 33245789999999999999999999997632 235899999999999987665777753 12
Q ss_pred CCceecEEEEeEEEEeCC--cccccee
Q 042768 356 KYPCQGIRLQNINLRHLK--QEAQSSC 380 (397)
Q Consensus 356 ~~~i~~i~~~nv~i~~~~--~~~~~~c 380 (397)
..+++||+|+||+.+... .+..+.|
T Consensus 280 ~~~i~ni~~~ni~gt~~~~~~~v~i~c 306 (339)
T 1ia5_A 280 GVPITDFVLDNVHGSVVSSGTNILISC 306 (339)
T ss_dssp SSCEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CceEEEEEEEeEEEEeCCCCEEEEEEe
Confidence 358999999999998865 2344555
No 22
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.88 E-value=1.1e-20 Score=193.48 Aligned_cols=247 Identities=12% Similarity=0.098 Sum_probs=194.4
Q ss_pred ceEEEEeeeceEEeccEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEec--Cc-ceEEEEeceecEEEEe
Q 042768 113 NWLSFEGVSGVSIIGGALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLN--SQ-MFHIVINGCKDVHVEG 189 (397)
Q Consensus 113 ~~i~~~~~~nv~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~--~~-~~~i~~~~~~~v~i~n 189 (397)
.++.+.+++||+|+|-++.... . +.+++.+|+|++|+++++.. ++ ..++++..|++|+|+|
T Consensus 332 ~~i~~~~~~nv~I~giti~ns~--~--------------~~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n 395 (608)
T 2uvf_A 332 SLMTLRGVENVYLAGFTVRNPA--F--------------HGIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFN 395 (608)
T ss_dssp CSEEEESEEEEEEESCEEECCS--S--------------CSEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEES
T ss_pred eEEEEEeeeeEEEeCcEEecCC--C--------------CEEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEe
Confidence 4689999999999994443221 1 25899999999999999864 22 4589999999999999
Q ss_pred EEEECCCC------CCCCCcceeeceeeEEEEecEEecCCeeEEeCCC----CeeEEEEeeEEeCC-CeEEEeeccccCC
Q 042768 190 VTVIAPGN------SPNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPG----TKNLWIERVTCGPG-HGISIGSLAKDLV 258 (397)
Q Consensus 190 ~~i~~~~~------~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~----~~ni~i~n~~~~~~-~gi~igs~~~~~~ 258 (397)
++|.+.++ +.+.||++...|+||+|+||++..+++++++++. .+||+|+||+|.+. +|++|++... .
T Consensus 396 ~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~~g--~ 473 (608)
T 2uvf_A 396 NFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLTDIGLRAKSTST--I 473 (608)
T ss_dssp CEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESCSEEEEEEEETT--T
T ss_pred eEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECCCceEEEeeecC--C
Confidence 99998665 2356677766789999999999999988888773 59999999999987 6999998633 2
Q ss_pred cCcEEEEEEEeeEEECC-cceEEEEeecCC-----------CCceEEcEEEEeeeeccCc---ccEEEEeecCCCCCCCC
Q 042768 259 EEGVQNVTVFKTVFTGT-TNGFRIKSWARP-----------SNGFVQGVRFIDAVMRNVQ---FPIVIDQNYCPHNLNCP 323 (397)
Q Consensus 259 ~~~v~ni~i~n~~~~~~-~~gi~i~s~~~~-----------~~g~v~nI~~~ni~~~~~~---~~i~i~~~~~~~~~~~~ 323 (397)
.+.++||+|+|++|.+. ..+|.|+..+.. ..+.+++|+|+||++++.. .++.|... +.
T Consensus 474 gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g~-~~------ 546 (608)
T 2uvf_A 474 GGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIKGD-TA------ 546 (608)
T ss_dssp CCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEEECB-GG------
T ss_pred CceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEEEEE-cC------
Confidence 35699999999999998 599999876642 2357999999999998865 36666642 11
Q ss_pred CCCcceEEEeEEEEeEEEeecCCceEEEecCCCCceecEEEEeEEEEeCCccccceeecccccccceecCC
Q 042768 324 GQVSGVKISDVIYQDIRGTSATPIAIKFDCSPKYPCQGIRLQNINLRHLKQEAQSSCNNVIGKALGLVQPN 394 (397)
Q Consensus 324 ~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~~~~~~i~~i~~~nv~i~~~~~~~~~~c~n~~~~~~~~~~~~ 394 (397)
...+++||+|+||+++... +..+. .|++++|+||++...++...+.|.++.+..+.-+.|.
T Consensus 547 ---~~~p~~ni~~~nv~i~~~~--~~~i~-----~~~~~~~~nv~i~~~~~~~~~~~~~v~~~~~~~v~~~ 607 (608)
T 2uvf_A 547 ---NKAWHRLVHVNNVQLNNVT--PTAIS-----DLRDSEFNKVTFTELRGDTPWHFSEVKNVKVDGKPVA 607 (608)
T ss_dssp ---GTBCEEEEEEEEEEEESCC--CCEEE-----SEESCEEEEEEEESCSSSCSCCEESCBSCCBTTCCC-
T ss_pred ---CCCccccEEEEeEEEEccC--ceeEE-----eccCceEEeEEEeCCCCCccEEEEeeeceEEcceEeC
Confidence 3357999999999998765 44444 5789999999998655445799999999877434453
No 23
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.87 E-value=7.1e-20 Score=175.00 Aligned_cols=202 Identities=19% Similarity=0.282 Sum_probs=163.1
Q ss_pred eEEEEccCCeEEEee---eEecCc--ce-------------EEEEeceecEEEEeEEEECCCCCCCCCcceeeceeeEEE
Q 042768 153 TLSFTNSNNIRINGL---LSLNSQ--MF-------------HIVINGCKDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKI 214 (397)
Q Consensus 153 ~i~~~~~~nv~I~~v---~i~~~~--~~-------------~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I 214 (397)
++.+.. +|++|++. +|.... .| .+.+..|+|++|+++++.+++ ..+|++..|++|+|
T Consensus 62 ~i~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp----~~~i~i~~~~nv~i 136 (339)
T 2iq7_A 62 LISFSG-TNININGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTP----VQAFSINSATTLGV 136 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEEc-ccEEEEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCC----cceEEEeccCCEEE
Confidence 566655 99999997 664332 23 488899999999999999953 46799999999999
Q ss_pred EecEEecC---------CeeEEeCCCCeeEEEEeeEEeCCC-eEEEeeccccCCcCcEEEEEEEeeEEECCcceEEEEee
Q 042768 215 TNCTIKTG---------DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDLVEEGVQNVTVFKTVFTGTTNGFRIKSW 284 (397)
Q Consensus 215 ~n~~i~~~---------dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~ 284 (397)
+|+++.+. .|+|.+.+ ++||+|+||++..++ ++++++. +||+|+||++.+. +|+.|+|.
T Consensus 137 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDciaiksg---------~nI~i~n~~~~~g-hGisiGSl 205 (339)
T 2iq7_A 137 YDVIIDNSAGDSAGGHNTDAFDVGS-STGVYISGANVKNQDDCLAINSG---------TNITFTGGTCSGG-HGLSIGSV 205 (339)
T ss_dssp ESCEEECGGGGGTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-CCEEEEEE
T ss_pred EEEEEECCccccccCCCCCcEEEcC-cceEEEEecEEecCCCEEEEcCC---------ccEEEEeEEEECC-ceEEECcC
Confidence 99999862 47888887 999999999999875 6999762 7999999999997 68999986
Q ss_pred cCCCCceEEcEEEEeeeeccCcccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeecCCceEEEec---------CC
Q 042768 285 ARPSNGFVQGVRFIDAVMRNVQFPIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTSATPIAIKFDC---------SP 355 (397)
Q Consensus 285 ~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~---------~~ 355 (397)
.....+.++||+|+|+++.+..++++|+.+.. +.+.++||+|+||++.....+++.+.. .+
T Consensus 206 g~~~~~~v~nV~v~n~~~~~~~~girIkt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p 275 (339)
T 2iq7_A 206 GGRSDNTVKTVTISNSKIVNSDNGVRIKTVSG----------ATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTP 275 (339)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCC
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCeEEEEEEEEeEEccCcccccEEEEeecCCCCCCCCC
Confidence 33345899999999999999999999998642 235899999999999987655776642 12
Q ss_pred --CCceecEEEEeEEEEeCC--cccccee
Q 042768 356 --KYPCQGIRLQNINLRHLK--QEAQSSC 380 (397)
Q Consensus 356 --~~~i~~i~~~nv~i~~~~--~~~~~~c 380 (397)
..+++||+|+||+.+... .+..+.|
T Consensus 276 ~~~~~i~ni~~~ni~gt~~~~~~~~~i~c 304 (339)
T 2iq7_A 276 TNGVPITGLTLSKITGSVASSGTNVYILC 304 (339)
T ss_dssp CSSSCEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CCCceEEEEEEEeEEEEeCCCCEEEEEEe
Confidence 257999999999999865 2344555
No 24
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.87 E-value=3.7e-20 Score=178.06 Aligned_cols=202 Identities=17% Similarity=0.238 Sum_probs=161.0
Q ss_pred eEEEEccCCeEEEe---eeEecCc--ce------------EEEEeceecEEEEeEEEECCCCCCCCCcceeeceeeEEEE
Q 042768 153 TLSFTNSNNIRING---LLSLNSQ--MF------------HIVINGCKDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKIT 215 (397)
Q Consensus 153 ~i~~~~~~nv~I~~---v~i~~~~--~~------------~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~ 215 (397)
+|.+ +.+|++|.| -+|.... .| .+.+..|+|++|+++++.+++ ..++++. |+||+|+
T Consensus 89 ~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp----~~~i~i~-~~nv~i~ 162 (362)
T 1czf_A 89 LISM-SGEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTP----LMAFSVQ-ANDITFT 162 (362)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCS----SCCEEEE-CSSEEEE
T ss_pred EEEE-eCccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCC----ccEEEEe-eCCEEEE
Confidence 5666 459999999 4554322 23 488999999999999999953 2469999 9999999
Q ss_pred ecEEecC---------CeeEEeCCCCeeEEEEeeEEeCCC-eEEEeeccccCCcCcEEEEEEEeeEEECCcceEEEEeec
Q 042768 216 NCTIKTG---------DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDLVEEGVQNVTVFKTVFTGTTNGFRIKSWA 285 (397)
Q Consensus 216 n~~i~~~---------dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~~ 285 (397)
|++|.+. .|||.+.+ ++||+|+||++..++ ++++++. +||+|+||++.+. +|+.|+|..
T Consensus 163 ~~~I~~~~~d~~~~~NtDGidi~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~G 231 (362)
T 1czf_A 163 DVTINNADGDTQGGHNTDAFDVGN-SVGVNIIKPWVHNQDDCLAVNSG---------ENIWFTGGTCIGG-HGLSIGSVG 231 (362)
T ss_dssp SCEEECGGGGTTTCCSCCSEEECS-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-CCEEEEEEC
T ss_pred EEEEECCccccccCCCCCceeecC-cceEEEEeeEEecCCCEEEEeCC---------eEEEEEEEEEeCC-ceeEEeecc
Confidence 9999862 47888887 999999999999886 5999762 7999999999986 799999863
Q ss_pred CCCCceEEcEEEEeeeeccCcccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeecCCceEEEec---------CC-
Q 042768 286 RPSNGFVQGVRFIDAVMRNVQFPIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTSATPIAIKFDC---------SP- 355 (397)
Q Consensus 286 ~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~---------~~- 355 (397)
....+.++||+|+|+++.+..++++|+.+.. +.+.++||+|+||++......++.+.. .+
T Consensus 232 ~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~ 301 (362)
T 1czf_A 232 DRSNNVVKNVTIEHSTVSNSENAVRIKTISG----------ATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPT 301 (362)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEEEEEEEEETT----------CCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCC
T ss_pred ccCCCCEEEEEEEeeEEECCceEEEEEEeCC----------CCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCC
Confidence 2246899999999999999999999998642 345899999999999876545776642 12
Q ss_pred -CCceecEEEEeEEEEeCC--ccccceee
Q 042768 356 -KYPCQGIRLQNINLRHLK--QEAQSSCN 381 (397)
Q Consensus 356 -~~~i~~i~~~nv~i~~~~--~~~~~~c~ 381 (397)
..+++||+|+||+.+..+ .+..+.|+
T Consensus 302 ~~~~i~nI~~~ni~gt~~~~~~~i~i~c~ 330 (362)
T 1czf_A 302 NGVTIQDVKLESVTGSVDSGATEIYLLCG 330 (362)
T ss_dssp SSEEEEEEEEEEEEEEECTTSEEEEEECC
T ss_pred CCceEEEEEEEEEEEEecCCceEEEEEeC
Confidence 247999999999998765 23445543
No 25
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.87 E-value=1.6e-19 Score=172.43 Aligned_cols=201 Identities=18% Similarity=0.294 Sum_probs=161.3
Q ss_pred eEEEEccCCeEEEee---eEecCc--ce-------------EEEEeceecEEEEeEEEECCCCCCCCCcceeeceeeEEE
Q 042768 153 TLSFTNSNNIRINGL---LSLNSQ--MF-------------HIVINGCKDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKI 214 (397)
Q Consensus 153 ~i~~~~~~nv~I~~v---~i~~~~--~~-------------~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I 214 (397)
++.+. .+|++|++. +|.... .| .+.+..|+|++|+++++.+++ ..++++. |++|+|
T Consensus 62 li~~~-~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~-~~nv~i 135 (336)
T 1nhc_A 62 LIRFG-GKDLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTP----VQAISVQ-ATNVHL 135 (336)
T ss_dssp SEECC-EESCEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEE-EEEEEE
T ss_pred EEEEe-cCCEEEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCC----ccEEEEE-eCCEEE
Confidence 45554 599999997 564322 23 488899999999999999953 3469999 999999
Q ss_pred EecEEecC---------CeeEEeCCCCeeEEEEeeEEeCCC-eEEEeeccccCCcCcEEEEEEEeeEEECCcceEEEEee
Q 042768 215 TNCTIKTG---------DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDLVEEGVQNVTVFKTVFTGTTNGFRIKSW 284 (397)
Q Consensus 215 ~n~~i~~~---------dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~ 284 (397)
+|+++.+. .|||.+.+ ++||+|+||++..++ +++|++. +||+|+||++.+. +|+.|+|.
T Consensus 136 ~~~~I~~~~~d~~~~~ntDGidi~~-s~nV~I~n~~i~~gDDciaiksg---------~nI~i~n~~~~~g-hGisiGS~ 204 (336)
T 1nhc_A 136 NDFTIDNSDGDDNGGHNTDGFDISE-STGVYISGATVKNQDDCIAINSG---------ESISFTGGTCSGG-HGLSIGSV 204 (336)
T ss_dssp ESCEEECTTHHHHTCCSCCSEEECS-CEEEEEESCEEESSSEEEEESSE---------EEEEEESCEEESS-SEEEEEEE
T ss_pred EEEEEECCCcccccCCCCCcEEecC-CCeEEEEeCEEEcCCCEEEEeCC---------eEEEEEeEEEECC-cCceEccC
Confidence 99999873 58899987 999999999999876 5999762 7999999999986 78999986
Q ss_pred cCCCCceEEcEEEEeeeeccCcccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeecCCceEEEec---------CC
Q 042768 285 ARPSNGFVQGVRFIDAVMRNVQFPIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTSATPIAIKFDC---------SP 355 (397)
Q Consensus 285 ~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~---------~~ 355 (397)
.....+.++||+|+|+++.+..++++|+.+.. +.+.++||+|+||++.....+++.+.. .+
T Consensus 205 g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p 274 (336)
T 1nhc_A 205 GGRDDNTVKNVTISDSTVSNSANGVRIKTIYK----------ETGDVSEITYSNIQLSGITDYGIVIEQDYENGSPTGTP 274 (336)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCC
T ss_pred ccccCCCEEEEEEEeeEEECCCcEEEEEEECC----------CCCEEeeeEEeeEEeeccccccEEEEeecCCCCCCCCC
Confidence 33245789999999999999999999998532 235899999999999987665776642 12
Q ss_pred --CCceecEEEEeEEEEeCC--cccccee
Q 042768 356 --KYPCQGIRLQNINLRHLK--QEAQSSC 380 (397)
Q Consensus 356 --~~~i~~i~~~nv~i~~~~--~~~~~~c 380 (397)
..+++||+|+||+.+... .+..+.|
T Consensus 275 ~~~~~i~~i~~~ni~gt~~~~~~~v~i~c 303 (336)
T 1nhc_A 275 STGIPITDVTVDGVTGTLEDDATQVYILC 303 (336)
T ss_dssp CSSSCEEEEEEEEEEEEECTTCEEEEEEC
T ss_pred CCCceEEEEEEEeEEEEeCCCCEEEEEEc
Confidence 357999999999999876 2344555
No 26
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.84 E-value=1.1e-18 Score=169.29 Aligned_cols=218 Identities=13% Similarity=0.150 Sum_probs=169.1
Q ss_pred ceEEEEccEEEeeccc-------cccC------------CCcceEEEEeeeceEEeccEEecCCCcccccccCCCCCCCC
Q 042768 90 DITFRIDGTLVAPADY-------RVLG------------QADNWLSFEGVSGVSIIGGALDAKGSSLWACKASGTNCPDG 150 (397)
Q Consensus 90 ~v~l~~~G~l~~~~~~-------~~~~------------~~~~~i~~~~~~nv~I~GG~idg~g~~~w~~~~~~~~~~~~ 150 (397)
+++|.+.|+|.+.... ..|. ....++.+.+++|++|+|-++.... .|
T Consensus 110 ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~iti~nsp--~~------------ 175 (376)
T 1bhe_A 110 NSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP--NF------------ 175 (376)
T ss_dssp SCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEEEEECCS--SC------------
T ss_pred eEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeEEEECCC--cE------------
Confidence 8999988888775431 1221 0135688999999999995444222 12
Q ss_pred ceeEEEEccCCeEEEeeeEecCc----ceEEEEeceecEEEEeEEEECCCCCCCCCcceee------ceeeEEEEecEEe
Q 042768 151 ATTLSFTNSNNIRINGLLSLNSQ----MFHIVINGCKDVHVEGVTVIAPGNSPNTDGIHVQ------LSMNVKITNCTIK 220 (397)
Q Consensus 151 ~~~i~~~~~~nv~I~~v~i~~~~----~~~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~------~s~nv~I~n~~i~ 220 (397)
.+.+.+|++++|+++++.++. ..++++..|++|+|+|++|.+ ..|+|.+. .|+||+|+||.+.
T Consensus 176 --~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDcIaiks~~~~~~s~nI~I~n~~~~ 248 (376)
T 1bhe_A 176 --HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIAT-----GDDNVAIKAYKGRAETRNISILHNDFG 248 (376)
T ss_dssp --SEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEEC-----SSCSEEEEECTTSCCEEEEEEEEEEEC
T ss_pred --EEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEec-----CCCeEEEcccCCCCCceEEEEEeeEEE
Confidence 488999999999999998752 358999999999999999997 45789988 5999999999998
Q ss_pred cCCeeEEeCC---CCeeEEEEeeEEeCC-CeEEEeeccccCCcCcEEEEEEEeeEEECCcceEEEEeecCC----CCceE
Q 042768 221 TGDDCIPIGP---GTKNLWIERVTCGPG-HGISIGSLAKDLVEEGVQNVTVFKTVFTGTTNGFRIKSWARP----SNGFV 292 (397)
Q Consensus 221 ~~dD~i~i~~---~~~ni~i~n~~~~~~-~gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~~~~----~~g~v 292 (397)
.+. +|++++ +.+||+|+||++.+. +|++|++... ..+.++||+|+|++|.+...+|.|...+.. ..+.+
T Consensus 249 ~gh-GisiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~g--~~G~v~ni~f~ni~~~~v~~~i~i~~~y~~~~~~~~~~i 325 (376)
T 1bhe_A 249 TGH-GMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDKS--AAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGSNVPDW 325 (376)
T ss_dssp SSS-CEEEEEEESSEEEEEEEEEEEESCSEEEEEECCTT--TCCEEEEEEEEEEEEESCSEEEEEETTSSCCCCCCCCEE
T ss_pred ccc-cEEeccCCccEeeEEEEeeEEeCCCcEEEEEEecC--CCceEeeEEEEeEEEeCCCceEEEEeeccCCCCCcCcEE
Confidence 764 698875 579999999999986 5999987532 245699999999999999999998765431 24579
Q ss_pred EcEEEEeeeeccCcccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeec
Q 042768 293 QGVRFIDAVMRNVQFPIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTSA 344 (397)
Q Consensus 293 ~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~ 344 (397)
+||+|+||+.+... ++.+... +..++++|+|+||+++..
T Consensus 326 ~ni~~~ni~gt~~~-~~~l~g~------------~~~~~~~I~l~nv~l~~~ 364 (376)
T 1bhe_A 326 SDITFKDVTSETKG-VVVLNGE------------NAKKPIEVTMKNVKLTSD 364 (376)
T ss_dssp EEEEEEEEEECSCC-EEEEECT------------TCSSCEEEEEEEEECCTT
T ss_pred EEEEEEEEEEEecc-eEEEEeC------------CCCCeeeEEEEeEEEecC
Confidence 99999999998654 5555521 112468999999998754
No 27
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.84 E-value=5.3e-18 Score=166.42 Aligned_cols=169 Identities=14% Similarity=0.187 Sum_probs=143.4
Q ss_pred eEEEEeceecEEEEeEEEECCCCCCCCCcceeeceeeEEEEecEEec----CCeeEEeCCCCeeEEEEeeEEeCCC-eEE
Q 042768 175 FHIVINGCKDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKT----GDDCIPIGPGTKNLWIERVTCGPGH-GIS 249 (397)
Q Consensus 175 ~~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~----~dD~i~i~~~~~ni~i~n~~~~~~~-gi~ 249 (397)
..+++..|+|++|++++|.++. ..+|++..|+||+|+|++|.+ +.|||.+.+ +||+|+||++..++ +|+
T Consensus 128 ~~i~~~~~~nv~I~~iti~nsp----~~~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~--~nV~I~n~~i~~gDD~Ia 201 (422)
T 1rmg_A 128 RILRLTDVTHFSVHDIILVDAP----AFHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG--SNIWVHDVEVTNKDECVT 201 (422)
T ss_dssp EEEEEEEEEEEEEEEEEEECCS----SCSEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE--EEEEEEEEEEESSSEEEE
T ss_pred eEEEEcccceEEEECeEEECCC----ceEEEEeCcCCEEEEeEEEECCCCCCCccEeecC--CeEEEEeeEEeCCCCeEE
Confidence 3688999999999999999843 358999999999999999997 358999987 99999999999886 599
Q ss_pred EeeccccCCcCcEEEEEEEeeEEECCcceEEEEeecCCCCceEEcEEEEeeeeccCcccEEEEeecCCCCCCCCCCCcce
Q 042768 250 IGSLAKDLVEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFIDAVMRNVQFPIVIDQNYCPHNLNCPGQVSGV 329 (397)
Q Consensus 250 igs~~~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 329 (397)
|++ +.+||+|+||++.+. +|+.|++. + ..+.++||+|+|+++.+..++++|+.. . ..+
T Consensus 202 i~s--------~~~nI~I~n~~~~~~-~GisIGS~-g-~~~~v~nV~v~n~~~~~~~~Gi~Ikt~-~----------g~G 259 (422)
T 1rmg_A 202 VKS--------PANNILVESIYCNWS-GGCAMGSL-G-ADTDVTDIVYRNVYTWSSNQMYMIKSN-G----------GSG 259 (422)
T ss_dssp EEE--------EEEEEEEEEEEEESS-SEEEEEEE-C-TTEEEEEEEEEEEEEESSSCSEEEEEB-B----------CCE
T ss_pred eCC--------CCcCEEEEeEEEcCC-cceeeccc-C-CCCcEEEEEEEeEEEeccceEEEEEec-C----------CCc
Confidence 987 468999999999887 69999986 3 357899999999999999999999973 1 124
Q ss_pred EEEeEEEEeEEEeecCCceEEEec---------CCCCceecEEEEeEEEEeC
Q 042768 330 KISDVIYQDIRGTSATPIAIKFDC---------SPKYPCQGIRLQNINLRHL 372 (397)
Q Consensus 330 ~i~nI~~~ni~~~~~~~~~~~i~~---------~~~~~i~~i~~~nv~i~~~ 372 (397)
.++||+|+||++..... ++.+.. .+..+++||+|+||+.+..
T Consensus 260 ~v~nI~~~NI~~~~v~~-~i~i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~~ 310 (422)
T 1rmg_A 260 TVSNVLLENFIGHGNAY-SLDIDGYWSSMTAVAGDGVQLNNITVKNWKGTEA 310 (422)
T ss_dssp EEEEEEEEEEEEEEESC-SEEEETBCTTSCCBSSSCCEEEEEEEEEEEEEES
T ss_pred EEEEEEEEeEEEECccc-cEEEEeeccCCCcccCCCceEEEEEEEeEEEEec
Confidence 89999999999987653 677753 1346899999999999875
No 28
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.83 E-value=2.2e-18 Score=165.08 Aligned_cols=203 Identities=17% Similarity=0.230 Sum_probs=159.5
Q ss_pred eEEEEccCCeEEEe---eeEecCc----------------ceEEEE-e-ceecEEEEeEEEECCCCCCCCCcceeeceee
Q 042768 153 TLSFTNSNNIRING---LLSLNSQ----------------MFHIVI-N-GCKDVHVEGVTVIAPGNSPNTDGIHVQLSMN 211 (397)
Q Consensus 153 ~i~~~~~~nv~I~~---v~i~~~~----------------~~~i~~-~-~~~~v~i~n~~i~~~~~~~~~DGi~~~~s~n 211 (397)
+|.+. .+|++|.+ -+|.... ...+.+ . .|++++|+++++.+++ ..++++..|++
T Consensus 63 ~i~~~-~~ni~I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp----~~~i~i~~~~n 137 (349)
T 1hg8_A 63 PIVIS-GSNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWP----VHCFDITGSSQ 137 (349)
T ss_dssp SEEEE-EESCEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCS----SEEEEEESCEE
T ss_pred eEEEE-CccEEEEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCC----CceEEEeccCC
Confidence 56674 49999999 5664322 115677 6 7889999999999953 46799999999
Q ss_pred EEEEecEEecC-----------------CeeEEeCCCCeeEEEEeeEEeCCC-eEEEeeccccCCcCcEEEEEEEeeEEE
Q 042768 212 VKITNCTIKTG-----------------DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDLVEEGVQNVTVFKTVFT 273 (397)
Q Consensus 212 v~I~n~~i~~~-----------------dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~~~~~~~~~v~ni~i~n~~~~ 273 (397)
|+|+|+++.+. .|||.+.+ ++||+|+||++..++ ++++++. +||+|+||++.
T Consensus 138 v~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~ 207 (349)
T 1hg8_A 138 LTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISS-SDHVTLDNNHVYNQDDCVAVTSG---------TNIVVSNMYCS 207 (349)
T ss_dssp EEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEES-CEEEEEEEEEEECSSCSEEESSE---------EEEEEEEEEEE
T ss_pred EEEEEEEEECCCCccccccccccccCCCCCeEEEcc-ccEEEEEeeEEecCCCeEEeeCC---------eEEEEEeEEEe
Confidence 99999999862 46888877 899999999998875 6999762 79999999999
Q ss_pred CCcceEEEEeecCCCCceEEcEEEEeeeeccCcccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeecCCceEEEec
Q 042768 274 GTTNGFRIKSWARPSNGFVQGVRFIDAVMRNVQFPIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTSATPIAIKFDC 353 (397)
Q Consensus 274 ~~~~gi~i~s~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~ 353 (397)
+. +|+.|+|......+.++||+|+|+++.+..++++|+.... +.+.++||+|+||++......++.++.
T Consensus 208 ~g-hGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~ 276 (349)
T 1hg8_A 208 GG-HGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSG----------ATGTINNVTYQNIALTNISTYGVDVQQ 276 (349)
T ss_dssp SS-CCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETT----------CCEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred CC-cceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCC----------CCccccceEEEEEEEEccccccEEEEe
Confidence 76 7999998632245889999999999999999999997532 346899999999999886545666642
Q ss_pred C---------C--CCceecEEEEeEEEEeCC--ccccceee
Q 042768 354 S---------P--KYPCQGIRLQNINLRHLK--QEAQSSCN 381 (397)
Q Consensus 354 ~---------~--~~~i~~i~~~nv~i~~~~--~~~~~~c~ 381 (397)
. + ..+++||+|+||+.+... .+..+.|+
T Consensus 277 ~Y~~~~~~~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~c~ 317 (349)
T 1hg8_A 277 DYLNGGPTGKPTNGVKISNIKFIKVTGTVASSAQDWFILCG 317 (349)
T ss_dssp EECSSSBCSCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC
T ss_pred eccCCCCCCcccCCceEEEEEEEeEEEEeCCCCEEEEEEeC
Confidence 1 1 137999999999998765 23455564
No 29
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.82 E-value=1.1e-18 Score=165.97 Aligned_cols=189 Identities=13% Similarity=0.164 Sum_probs=152.5
Q ss_pred eEEEEccCCeEEEee--eEecCc--ce-------------EEEEeceecEEEEeEEEECCCCCCCCCcceeeceee-EEE
Q 042768 153 TLSFTNSNNIRINGL--LSLNSQ--MF-------------HIVINGCKDVHVEGVTVIAPGNSPNTDGIHVQLSMN-VKI 214 (397)
Q Consensus 153 ~i~~~~~~nv~I~~v--~i~~~~--~~-------------~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~~s~n-v~I 214 (397)
+|.+. .+|++|.|- +|.... .| .+.+..|+ ++|+++++.+++ ...+++..|+| |+|
T Consensus 60 ~i~~~-~~ni~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~nsp----~~~i~i~~~~n~v~i 133 (335)
T 1k5c_A 60 LFTID-GTGINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNSP----AQAISVGPTDAHLTL 133 (335)
T ss_dssp SEEEE-EEEEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESCS----SCCEEEEEEEEEEEE
T ss_pred EEEEE-ccCEEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECCC----cceEEEEccCCeEEE
Confidence 56675 599999993 553221 12 37788999 999999999953 35699999999 999
Q ss_pred EecEEecC----------CeeEEeCCCCeeEEEEeeEEeCCC-eEEEeeccccCCcCcEEEEEEEeeEEECCcceEEEEe
Q 042768 215 TNCTIKTG----------DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDLVEEGVQNVTVFKTVFTGTTNGFRIKS 283 (397)
Q Consensus 215 ~n~~i~~~----------dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~gi~i~s 283 (397)
+|+++.+. .|+|.+ + ++||+|+||++..++ .++|++. +||+|+||++... +|+.|+|
T Consensus 134 ~~v~I~~~~~d~~~~~~NtDGidi-~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisIGS 201 (335)
T 1k5c_A 134 DGITVDDFAGDTKNLGHNTDGFDV-S-ANNVTIQNCIVKNQDDCIAINDG---------NNIRFENNQCSGG-HGISIGS 201 (335)
T ss_dssp ESCEEECGGGGGGGCCCSCCSEEE-E-CSSEEEESCEEESSSCSEEEEEE---------EEEEEESCEEESS-CCEEEEE
T ss_pred EEEEEECCCCcccccCCCCCeEcc-c-CCeEEEEeeEEEcCCCEEEeeCC---------eeEEEEEEEEECC-ccCeEee
Confidence 99999873 478999 5 999999999999886 5999872 7999999999986 7899998
Q ss_pred ecCCCCceEEcEEEEeeeeccCcccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeecCCceEEEec-------CC-
Q 042768 284 WARPSNGFVQGVRFIDAVMRNVQFPIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTSATPIAIKFDC-------SP- 355 (397)
Q Consensus 284 ~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~-------~~- 355 (397)
.. ..+.|+||+|+|+++.+...+++|+..... ..+.++||+|+||++......++.+.. .+
T Consensus 202 ~g--~~~~v~nV~v~n~~~~~t~~girIKt~~g~---------~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~~~p~ 270 (335)
T 1k5c_A 202 IA--TGKHVSNVVIKGNTVTRSMYGVRIKAQRTA---------TSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNPG 270 (335)
T ss_dssp EC--TTCEEEEEEEESCEEEEEEEEEEEEEETTC---------CSCEEEEEEEESCEEEEEEEEEEEEEEEETSSSSSCC
T ss_pred cc--CCCCEEEEEEEeeEEECCCceEEEEEeCCC---------CcceEeeeEEEEEEEEccccccEEEEeeCCCCCCCCC
Confidence 72 268999999999999999999999976432 114799999999999887545777763 22
Q ss_pred -CCceecEEEEeEEEE
Q 042768 356 -KYPCQGIRLQNINLR 370 (397)
Q Consensus 356 -~~~i~~i~~~nv~i~ 370 (397)
..+++||+|+||++.
T Consensus 271 ~~~~i~nI~~~nI~~~ 286 (335)
T 1k5c_A 271 TGAPFSDVNFTGGATT 286 (335)
T ss_dssp SSSCEEEEEECSSCEE
T ss_pred CCceEEEEEEEEEEEe
Confidence 358999999999944
No 30
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.78 E-value=1.2e-17 Score=168.08 Aligned_cols=235 Identities=14% Similarity=0.119 Sum_probs=168.7
Q ss_pred CCcE-EEEcCcEEEecceeecCCCCCcceEEEEccEEEeeccc------cccCC---CcceEEEE------eeeceEEec
Q 042768 64 ESAT-LYVPKGRYLLGSVAFNGDCKSSDITFRIDGTLVAPADY------RVLGQ---ADNWLSFE------GVSGVSIIG 127 (397)
Q Consensus 64 ~g~~-v~~p~G~Y~~~~l~l~~~~~s~~v~l~~~G~l~~~~~~------~~~~~---~~~~i~~~------~~~nv~I~G 127 (397)
.+-+ |++++|.++.+.+.+.+. . +++|.+.|+|.+.... ..|+. ....+.+. +++||.|+|
T Consensus 263 Snvt~L~L~~GA~l~g~i~~~~~--~-nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~G 339 (574)
T 1ogo_X 263 SNTYWVYLAPGAYVKGAIEYFTK--Q-NFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVG 339 (574)
T ss_dssp TTCCEEEECTTEEEESCEEECCS--S-CEEEESSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEES
T ss_pred CCCceEEecCCcEEEccEEEeCc--e-eEEEEeCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEEC
Confidence 4566 999999999999888764 5 8999999998664211 11111 11223333 799999999
Q ss_pred -cEEecCCCcccccccCCCCCCCCceeEEEEccCCe--EEEeeeEecCcc---eEEEEeceecEEEEeEEEECCCCCCCC
Q 042768 128 -GALDAKGSSLWACKASGTNCPDGATTLSFTNSNNI--RINGLLSLNSQM---FHIVINGCKDVHVEGVTVIAPGNSPNT 201 (397)
Q Consensus 128 -G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv--~I~~v~i~~~~~---~~i~~~~~~~v~i~n~~i~~~~~~~~~ 201 (397)
...+. +.| .+++.+|+|+ +|+++++.+++. .++++. +||+|+||+|.+ +.
T Consensus 340 iti~NS---p~w--------------~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~-----gD 395 (574)
T 1ogo_X 340 PTINAP---PFN--------------TMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHV-----ND 395 (574)
T ss_dssp CEEECC---SSC--------------SEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEE-----SS
T ss_pred eEEECC---CCc--------------EEeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEEC-----CC
Confidence 55552 223 3889999999 999999987544 478888 999999999998 45
Q ss_pred CcceeeceeeEEEEecEEecCC-ee-EEeCC---CCeeEEEEeeEEeCCC---------eEEEeeccccC------CcCc
Q 042768 202 DGIHVQLSMNVKITNCTIKTGD-DC-IPIGP---GTKNLWIERVTCGPGH---------GISIGSLAKDL------VEEG 261 (397)
Q Consensus 202 DGi~~~~s~nv~I~n~~i~~~d-D~-i~i~~---~~~ni~i~n~~~~~~~---------gi~igs~~~~~------~~~~ 261 (397)
|+|.+.+ +||+|+||.+..+. .+ |.+++ ..+||+|+||++.+.. +..+|++..|. ...+
T Consensus 396 DcIaIks-~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~g 474 (574)
T 1ogo_X 396 DAIKIYY-SGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKS 474 (574)
T ss_dssp CSEECCS-TTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEE
T ss_pred CEEEECC-ccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCCCce
Confidence 7898876 99999999999865 35 89885 4799999999997542 44455543221 0112
Q ss_pred EEEEEEEeeEEECCcceEEEEeecCCCCceEEcEEEEeeeecc------Ccc-cEEEEeecCCCCCCCCCCCcceEEEeE
Q 042768 262 VQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFIDAVMRN------VQF-PIVIDQNYCPHNLNCPGQVSGVKISDV 334 (397)
Q Consensus 262 v~ni~i~n~~~~~~~~gi~i~s~~~~~~g~v~nI~~~ni~~~~------~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nI 334 (397)
+ ||+|+|+++.+...++ +... ..+.++||+|+|+++++ ... +..+... . .+++||
T Consensus 475 V-NI~f~NI~~~~v~~~i-i~i~---p~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G~------------~-~~v~nI 536 (574)
T 1ogo_X 475 I-SMTVSNVVCEGLCPSL-FRIT---PLQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAA------------S-GLTMGL 536 (574)
T ss_dssp E-EEEEEEEEECSSBCEE-EEEC---CSEEEEEEEEEEEEETTCBCCSTTCTTCEEECCC------------T-TCCEEE
T ss_pred E-EEEEEeEEEEceeEee-EEEC---CCCCEEEEEEEeEEEeCccccccccccceeEecC------------C-CccceE
Confidence 8 9999999999988875 4443 35689999999999886 211 1112111 1 367999
Q ss_pred EEEeEEEeec
Q 042768 335 IYQDIRGTSA 344 (397)
Q Consensus 335 ~~~ni~~~~~ 344 (397)
+|+|+++.+.
T Consensus 537 ~~~NV~i~g~ 546 (574)
T 1ogo_X 537 AISAWTIGGQ 546 (574)
T ss_dssp EEEEEEETTE
T ss_pred EEEeEEEeCE
Confidence 9999988654
No 31
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.78 E-value=8.7e-18 Score=169.27 Aligned_cols=249 Identities=14% Similarity=0.176 Sum_probs=169.2
Q ss_pred CCCcE-EEEcCcEEEecceeecCCCCCcceEEEEccEEEeeccc------cccCC----CcceEEE------EeeeceEE
Q 042768 63 TESAT-LYVPKGRYLLGSVAFNGDCKSSDITFRIDGTLVAPADY------RVLGQ----ADNWLSF------EGVSGVSI 125 (397)
Q Consensus 63 ~~g~~-v~~p~G~Y~~~~l~l~~~~~s~~v~l~~~G~l~~~~~~------~~~~~----~~~~i~~------~~~~nv~I 125 (397)
.++.+ |++++|.|+.+++.+.+. -. +++|.+.|+|.+.... ..|.. ....+.+ .+++||.|
T Consensus 220 ~s~~~~L~l~~GA~L~gs~~~~~~-~~-nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I 297 (549)
T 1x0c_A 220 SSSVTWVYFAPGAYVKGAVEFLST-AS-EVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVL 297 (549)
T ss_dssp CTTCCEEEECTTEEEESCEEECCC-SS-EEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEE
T ss_pred cCCCCeEecCCCCEEEEEEEEecC-ce-eEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEE
Confidence 45667 999999999988877632 14 8999888898775421 11211 0112333 78999999
Q ss_pred ec-cEEecCCCcccccccCCCCCCCCceeEEEE-cc-CC--eEEEeeeEecCcc---eEEEEeceecEEEEeEEEECCCC
Q 042768 126 IG-GALDAKGSSLWACKASGTNCPDGATTLSFT-NS-NN--IRINGLLSLNSQM---FHIVINGCKDVHVEGVTVIAPGN 197 (397)
Q Consensus 126 ~G-G~idg~g~~~w~~~~~~~~~~~~~~~i~~~-~~-~n--v~I~~v~i~~~~~---~~i~~~~~~~v~i~n~~i~~~~~ 197 (397)
+| ...+. ++| .+++. .| ++ ++|+++++.+++. .++++. +||+|+||+|.+
T Consensus 298 ~Giti~Ns---p~w--------------~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~--- 355 (549)
T 1x0c_A 298 NGVTVSAP---PFN--------------SMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHT--- 355 (549)
T ss_dssp ESCEEECC---SSC--------------SEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEE---
T ss_pred ECcEEECC---Cce--------------eEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeC---
Confidence 99 55442 233 36644 45 69 9999999986543 478887 999999999998
Q ss_pred CCCCCcceeeceeeEEEEecEEecCC-ee-EEeCC---CCeeEEEEeeEEeCCC-------eEEEeecccc--C------
Q 042768 198 SPNTDGIHVQLSMNVKITNCTIKTGD-DC-IPIGP---GTKNLWIERVTCGPGH-------GISIGSLAKD--L------ 257 (397)
Q Consensus 198 ~~~~DGi~~~~s~nv~I~n~~i~~~d-D~-i~i~~---~~~ni~i~n~~~~~~~-------gi~igs~~~~--~------ 257 (397)
+.|+|.+.+ +||+|+||.+..+. .+ |.+++ ..+||+|+||++.+.. |..|++...+ .
T Consensus 356 --gDDcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~ 432 (549)
T 1x0c_A 356 --DDDGLKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSS 432 (549)
T ss_dssp --SSCCEECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCS
T ss_pred --CCCEEEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCc
Confidence 457899887 99999999998754 35 88875 4799999999997643 4225542111 1
Q ss_pred C-cCcEEEEEEEeeEEECCc-ceEEEEeecCCCCceEEcEEEEeeeeccCc-----c-cEEEEeecCCCCCCCCCCCcce
Q 042768 258 V-EEGVQNVTVFKTVFTGTT-NGFRIKSWARPSNGFVQGVRFIDAVMRNVQ-----F-PIVIDQNYCPHNLNCPGQVSGV 329 (397)
Q Consensus 258 ~-~~~v~ni~i~n~~~~~~~-~gi~i~s~~~~~~g~v~nI~~~ni~~~~~~-----~-~i~i~~~~~~~~~~~~~~~~~~ 329 (397)
+ .+.++||+|+|+++.+.. .|+.+....+..++.++||+|+|+++++.. . +..+. .+.+- .|. ...
T Consensus 433 d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~-G~~~~--~~~---~~~ 506 (549)
T 1x0c_A 433 NHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMP-VWYDL--NNG---KQI 506 (549)
T ss_dssp CCCCBEEEEEEEEEEEEEEEEEEEECCSEEECCSEEEEEEEEEEEEEEEECCGGGTCSCEEEC-CCBBT--TTC---CBC
T ss_pred CCCceEccEEEEeEEEEeEEEeceEEeeecCCCCCcCccEEEEEEEEEccccccccccceEEe-CCCcc--ccc---cce
Confidence 1 457999999999998875 554432222224557999999999998765 2 22222 22110 011 123
Q ss_pred EEEeEEEEeEEEeec
Q 042768 330 KISDVIYQDIRGTSA 344 (397)
Q Consensus 330 ~i~nI~~~ni~~~~~ 344 (397)
+++||+|+||++.+.
T Consensus 507 ~v~nI~f~NV~i~G~ 521 (549)
T 1x0c_A 507 TVTDFSIEGFTVGNT 521 (549)
T ss_dssp CEEEEEEEEEEETTE
T ss_pred eeeeEEEEeEEEeCe
Confidence 799999999988654
No 32
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.65 E-value=5.6e-15 Score=140.26 Aligned_cols=229 Identities=15% Similarity=0.191 Sum_probs=156.2
Q ss_pred CceeEEeecc----CccCCCccchHHHHHHHHHHHhh------cCCCcEEEEcCcEEEe-cceeecCCCCCcceEEEEcc
Q 042768 29 TTTTYNVLSF----GAKGNGVTDSTQAFAKAWAAACA------STESATLYVPKGRYLL-GSVAFNGDCKSSDITFRIDG 97 (397)
Q Consensus 29 ~~~~~~v~df----GA~~dg~tddt~aiq~Ai~~ac~------~~~g~~v~~p~G~Y~~-~~l~l~~~~~s~~v~l~~~G 97 (397)
....++|++| +|++|+.+|++++|+++|++.-+ +.+|++|++|||+|.+ +++.+.. + .++|.+++
T Consensus 11 ~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G~Y~l~g~ivIdk---p-~LtL~G~~ 86 (410)
T 2inu_A 11 SPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPGDYDLHTQVVVDV---S-YLTIAGFG 86 (410)
T ss_dssp -CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSEEEEECSCEEECC---T-TEEEECSC
T ss_pred cCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCCeeccCCcEEEec---C-cEEEEecC
Confidence 4579999999 89999999999999999987732 3679999999999984 8888862 3 59998864
Q ss_pred --E----EEeeccccc----cCCC-----------cceEEEEe-----eeceEEeccEEecCCCcccccccCCCCCCCCc
Q 042768 98 --T----LVAPADYRV----LGQA-----------DNWLSFEG-----VSGVSIIGGALDAKGSSLWACKASGTNCPDGA 151 (397)
Q Consensus 98 --~----l~~~~~~~~----~~~~-----------~~~i~~~~-----~~nv~I~GG~idg~g~~~w~~~~~~~~~~~~~ 151 (397)
. |.+...... ++.. ++.+.++. .++|++.|-+|+|..-.-| |.......
T Consensus 87 ~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~v~I~G~~~~~~-----G~s~~~~d 161 (410)
T 2inu_A 87 HGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRDFCLDGVGFTPG-----KNSYHNGK 161 (410)
T ss_dssp CCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEECCEEESCEEECCCCSSS-----TTSCCCSC
T ss_pred CCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCCcEECCEEEECCEeecC-----CCCcccCc
Confidence 2 331100011 1111 22233321 1667777756655411111 01122345
Q ss_pred eeEEEEc-cCCeEEEeeeEecCcceEEEEeceecEEEEeEEEECCCCCCCCCcceeec-eeeEEEEecEEecCCee--EE
Q 042768 152 TTLSFTN-SNNIRINGLLSLNSQMFHIVINGCKDVHVEGVTVIAPGNSPNTDGIHVQL-SMNVKITNCTIKTGDDC--IP 227 (397)
Q Consensus 152 ~~i~~~~-~~nv~I~~v~i~~~~~~~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~~-s~nv~I~n~~i~~~dD~--i~ 227 (397)
..|.+.. +++++|+++.|.+. .++|.+..+++++|++..|.. ...||++++ ++...|+++.+..++|| |.
T Consensus 162 AGI~v~~~~d~~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~e-----~GNgI~L~G~~~~~~I~~N~i~~~~dG~gIy 235 (410)
T 2inu_A 162 TGIEVASDNDSFHITGMGFVYL-EHALIVRGADALRVNDNMIAE-----CGNCVELTGAGQATIVSGNHMGAGPDGVTLL 235 (410)
T ss_dssp EEEEECSCEESCEEESCEEESC-SEEEEETTEESCEEESCEEES-----SSEEEEECSCEESCEEESCEEECCTTSEEEE
T ss_pred eeEEEeccCCeEEEECCEEecc-cEEEEEccCCCcEEECCEEEe-----cCCceeeccccccceEecceeeecCCCCEEE
Confidence 5687875 88899999999886 689999999999999999995 345788877 77788888888887776 66
Q ss_pred eCCCCeeEEEEeeEE-eCC-CeEEEeeccccCCcCcEEEEEEEeeEEECCcceEEEE
Q 042768 228 IGPGTKNLWIERVTC-GPG-HGISIGSLAKDLVEEGVQNVTVFKTVFTGTTNGFRIK 282 (397)
Q Consensus 228 i~~~~~ni~i~n~~~-~~~-~gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~gi~i~ 282 (397)
+.. +++.+|+++.+ ..+ .|+-+- ...+-.|+++++.+...|+.+-
T Consensus 236 l~n-s~~~~I~~N~i~~~~R~gIh~m---------~s~~~~i~~N~f~~~~~Gi~~M 282 (410)
T 2inu_A 236 AEN-HEGLLVTGNNLFPRGRSLIEFT---------GCNRCSVTSNRLQGFYPGMLRL 282 (410)
T ss_dssp EES-EESCEEESCEECSCSSEEEEEE---------SCBSCEEESCEEEESSSCSEEE
T ss_pred EEe-CCCCEEECCCcccCcceEEEEE---------ccCCCEEECCEEecceeEEEEE
Confidence 665 67777777766 334 366551 2235677777777777776543
No 33
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.50 E-value=1.3e-11 Score=123.61 Aligned_cols=223 Identities=13% Similarity=0.147 Sum_probs=147.8
Q ss_pred cceEEEEeeeceEEeccEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcceEEEEec------eecE
Q 042768 112 DNWLSFEGVSGVSIIGGALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQMFHIVING------CKDV 185 (397)
Q Consensus 112 ~~~i~~~~~~nv~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~~~i~~~~------~~~v 185 (397)
..++.+.+++|+.|++-++...+. ..+.+....+ | .+++++. |+||
T Consensus 134 P~lI~f~~c~NV~I~gVti~NSp~----------------~gI~I~~~~~---------N---DGid~DGi~fd~~S~NV 185 (609)
T 3gq8_A 134 ESNLSIRACHNVYIRDIEAVDCTL----------------HGIDITCGGL---------D---YPYLGDGTTAPNPSENI 185 (609)
T ss_dssp TCSEEEESCEEEEEEEEEEESCSS----------------CSEEEECSSS---------S---CCCCCTTCCCSSCCEEE
T ss_pred ccEEEEEeeceEEEEeeEEEeCCC----------------CCeEEeCCCC---------C---ccccCCCccccccceeE
Confidence 346888899999999944321111 1122222221 1 3445555 9999
Q ss_pred EEEeEEEECCCCCCCCCcceeeceeeEEEEecEEecC-----CeeEEeCCCCeeEEEEeeEEeCC-CeEEEeeccccCCc
Q 042768 186 HVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKTG-----DDCIPIGPGTKNLWIERVTCGPG-HGISIGSLAKDLVE 259 (397)
Q Consensus 186 ~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~-----dD~i~i~~~~~ni~i~n~~~~~~-~gi~igs~~~~~~~ 259 (397)
+|+||+|++ ...|||.+.+|+||+|+||++... ..+|.++.+++||+|+||++.+. .|+.|++.+ ..
T Consensus 186 ~I~Nc~I~~----tGDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~GIrIKt~~---~~ 258 (609)
T 3gq8_A 186 WIENCEATG----FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHG---DA 258 (609)
T ss_dssp EEESCEEES----CSSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSSEEEEEEECT---TS
T ss_pred EEEeeEEEe----cCCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCCCEEEEEecC---CC
Confidence 999999986 356999999999999999999654 47999998889999999999986 589999863 23
Q ss_pred CcEEEEEEEeeEEECCcceEEEEeecC-----CCCceEEcEEEEeeeeccCc-----------ccEEEEeec--------
Q 042768 260 EGVQNVTVFKTVFTGTTNGFRIKSWAR-----PSNGFVQGVRFIDAVMRNVQ-----------FPIVIDQNY-------- 315 (397)
Q Consensus 260 ~~v~ni~i~n~~~~~~~~gi~i~s~~~-----~~~g~v~nI~~~ni~~~~~~-----------~~i~i~~~~-------- 315 (397)
+.++||+|.|+...+.-....+..... +.....+||.+.|++..... .++.+..+.
T Consensus 259 ~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p~~~~~~y~~~~~r~l~vs~~~~v~i~~~~ 338 (609)
T 3gq8_A 259 PAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLT 338 (609)
T ss_dssp CCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESCCCTTCHHHHCCCEEEEEESCEEEEEEEEE
T ss_pred CccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEeecccCceeeCCCcceEEEEcCCCeEEcCce
Confidence 569999999987776645444433211 13346789999999875432 134443221
Q ss_pred --CCCCCCCCCCCcceEE----EeEEEEeEEEeecC--CceEEEecCCCCceecEEEEeEEEEeC
Q 042768 316 --CPHNLNCPGQVSGVKI----SDVIYQDIRGTSAT--PIAIKFDCSPKYPCQGIRLQNINLRHL 372 (397)
Q Consensus 316 --~~~~~~~~~~~~~~~i----~nI~~~ni~~~~~~--~~~~~i~~~~~~~i~~i~~~nv~i~~~ 372 (397)
.+ +.+... .+...+ +||++.+|.+++-. ...+++.|.+ ..++.|.+.|+.+...
T Consensus 339 ~~~d-~~y~~~-~~~~~~q~~~~~~~l~~~~i~gf~~a~~~i~~~gg~-~~~~~v~i~n~~i~~s 400 (609)
T 3gq8_A 339 GYTD-DPNLLT-ETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGS-RGGDAVNISNVTLNNS 400 (609)
T ss_dssp EECS-CTTSCC-SEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCCC-CTTCCEEEEEEEEESC
T ss_pred EccC-CccccC-CceEEEEEecceeEEcceEEecccCCCCCeEEeCCC-CcCCeEEEeccEEeec
Confidence 11 111111 222223 89999999988643 4467776653 3567777777777643
No 34
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.48 E-value=1.7e-11 Score=124.69 Aligned_cols=223 Identities=13% Similarity=0.147 Sum_probs=144.4
Q ss_pred cceEEEEeeeceEEeccEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcceEEEEec------eecE
Q 042768 112 DNWLSFEGVSGVSIIGGALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQMFHIVING------CKDV 185 (397)
Q Consensus 112 ~~~i~~~~~~nv~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~~~i~~~~------~~~v 185 (397)
..++.+.+++|++|++-++...+. ..+.+....+ | .+++++. |+||
T Consensus 134 P~lI~f~~ckNV~I~gVti~NSp~----------------~gI~I~np~~---------N---DGid~DGi~fdi~S~NV 185 (772)
T 3gqn_A 134 ESNLSIRACHNVYIRDIEAVDCTL----------------HGIDITCGGL---------D---YPYLGDGTTAPNPSENI 185 (772)
T ss_dssp TCSEEEESCEEEEEEEEEEESCSS----------------CSEEEECSSS---------S---CCCCCTTCCCSSCCEEE
T ss_pred ccEEEEEeeceEEEEeEEEEeCCC----------------CCEEEeCCCc---------C---CcCCCcCcccccccceE
Confidence 346888899999999944321110 1122222211 1 3455555 9999
Q ss_pred EEEeEEEECCCCCCCCCcceeeceeeEEEEecEEecC-----CeeEEeCCCCeeEEEEeeEEeCC-CeEEEeeccccCCc
Q 042768 186 HVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKTG-----DDCIPIGPGTKNLWIERVTCGPG-HGISIGSLAKDLVE 259 (397)
Q Consensus 186 ~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~-----dD~i~i~~~~~ni~i~n~~~~~~-~gi~igs~~~~~~~ 259 (397)
+|+||+|++ ...|||.+.+|+||+|+||.+... ..+|.++++++||+|+||++.+. .|+.|++.+ ..
T Consensus 186 ~I~Nc~I~n----tGDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~nGIRIKt~~---~g 258 (772)
T 3gqn_A 186 WIENCEATG----FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHG---DA 258 (772)
T ss_dssp EEESCEEES----CSSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESSSEEEEECCCT---TS
T ss_pred EEEeeEEEe----cCcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEECCCcEEEEEEeC---CC
Confidence 999999987 356999999999999999999553 47999998889999999999986 589998763 34
Q ss_pred CcEEEEEEEeeEEECCcceEEEEeecC-----CCCceEEcEEEEeeeeccCc-----------ccEEEEeec--------
Q 042768 260 EGVQNVTVFKTVFTGTTNGFRIKSWAR-----PSNGFVQGVRFIDAVMRNVQ-----------FPIVIDQNY-------- 315 (397)
Q Consensus 260 ~~v~ni~i~n~~~~~~~~gi~i~s~~~-----~~~g~v~nI~~~ni~~~~~~-----------~~i~i~~~~-------- 315 (397)
+.++||+|.++..........+..... +..-..+||.+.|++..... .++.+....
T Consensus 259 g~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~P~~~~~ly~~~~praL~vsay~~v~i~~~~ 338 (772)
T 3gqn_A 259 PAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLT 338 (772)
T ss_dssp CCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEESCCCSSCHHHHCCCEEEEEESCEEEEEEEEE
T ss_pred CccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEcccccCceeeCCCcceEEEEcCCCcEecCce
Confidence 569999999876665434333322111 12236789999999875432 134443211
Q ss_pred --CCCCCCCCCCCcceEE----EeEEEEeEEEeecC--CceEEEecCCCCceecEEEEeEEEEeC
Q 042768 316 --CPHNLNCPGQVSGVKI----SDVIYQDIRGTSAT--PIAIKFDCSPKYPCQGIRLQNINLRHL 372 (397)
Q Consensus 316 --~~~~~~~~~~~~~~~i----~nI~~~ni~~~~~~--~~~~~i~~~~~~~i~~i~~~nv~i~~~ 372 (397)
.. +.+... .+...+ +||++.+|.+++-. ...+++.|.+ ..++.|++.|+.+...
T Consensus 339 ~igd-~~y~~~-~~~i~~q~~~~~~~ln~i~i~gf~~a~~~i~v~gg~-~~~~~v~i~n~~i~~s 400 (772)
T 3gqn_A 339 GYTD-DPNLLT-ETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGS-RGGDAVNISNVTLNNS 400 (772)
T ss_dssp EECS-CTTSCC-SEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCST-TCCEEEEEEEEEEESC
T ss_pred eccC-cccccC-CceEEEEEecceeEEcceEEecccCCCCCeEEeCCC-CCCCeEEEeccEEeec
Confidence 11 111111 122223 79999999988643 3467776653 3567777777777643
No 35
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.45 E-value=1.8e-12 Score=127.66 Aligned_cols=159 Identities=16% Similarity=0.149 Sum_probs=120.8
Q ss_pred EccCCeEEEee----eEecC-----cceEEEEeceecEEEEeEEEECCCCCCCCCcceeeceeeEEEEecEEecCCeeEE
Q 042768 157 TNSNNIRINGL----LSLNS-----QMFHIVINGCKDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKTGDDCIP 227 (397)
Q Consensus 157 ~~~~nv~I~~v----~i~~~-----~~~~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~ 227 (397)
.+.+|++|+|- .+... ....+.+..|+|++|+++++.+.+ .+..+.+|.+. ..||+.
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w--------~ih~s~~V~i~------NtDGi~ 171 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNK--------TIFASILVDVT------ERNGRL 171 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCS--------CBSCSEEECEE------EETTEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccc--------eEeeceeeeee------cCCCce
Confidence 56788888876 33322 123577889999999999999832 13344455443 257777
Q ss_pred eCCCCeeEEEEeeEEeCCC-eEEEeeccccCCcCcEEEEEEEeeEEECCcceEEEEee-----cCCCCceEEcEEEEeee
Q 042768 228 IGPGTKNLWIERVTCGPGH-GISIGSLAKDLVEEGVQNVTVFKTVFTGTTNGFRIKSW-----ARPSNGFVQGVRFIDAV 301 (397)
Q Consensus 228 i~~~~~ni~i~n~~~~~~~-gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~-----~~~~~g~v~nI~~~ni~ 301 (397)
+ .++||+|+||++.+++ ++ |+. ....++||+|+||+|.+ .+|++|+++ .. ..+.++||+|+|++
T Consensus 172 i--~s~nV~I~n~~I~~gddgi--Gs~----~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~-~~g~v~NI~~~Ni~ 241 (464)
T 1h80_A 172 H--WSRNGIIERIKQNNALFGY--GLI----QTYGADNILFRNLHSEG-GIALRMETDNLLMKNY-KQGGIRNIFADNIR 241 (464)
T ss_dssp E--EEEEEEEEEEEEESCCTTC--EEE----EESEEEEEEEEEEEEES-SEEEEEECCCHHHHHH-TCCEEEEEEEEEEE
T ss_pred e--eccCEEEeceEEecCCCeE--Eec----ccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccC-CCCcEEEEEEEeEE
Confidence 7 4899999999999875 45 322 34679999999999999 899999987 44 67899999999999
Q ss_pred eccCcccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeecCCceEEEec
Q 042768 302 MRNVQFPIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTSATPIAIKFDC 353 (397)
Q Consensus 302 ~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~ 353 (397)
|+++..+|.|+.. ...++||+|+||+++... .++.+..
T Consensus 242 ~~nv~~~I~I~p~-------------~~~isnItfeNI~~t~~~-~aI~i~q 279 (464)
T 1h80_A 242 CSKGLAAVMFGPH-------------FMKNGDVQVTNVSSVSCG-SAVRSDS 279 (464)
T ss_dssp EESSSEEEEEECT-------------TCBCCCEEEEEEEEESSS-CSEEECC
T ss_pred EECCceeEEEeCC-------------CceEeEEEEEEEEEEccc-eeEEEec
Confidence 9999999999821 126899999999999854 5676653
No 36
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.43 E-value=9.7e-12 Score=120.71 Aligned_cols=250 Identities=18% Similarity=0.160 Sum_probs=164.1
Q ss_pred ccccCceeEEeeccCcc-CCCccchHH-HHHHHHHHHhhcCCCcEEEEcCcEEE--e-----cceeecCCCCC----cce
Q 042768 25 SSYATTTTYNVLSFGAK-GNGVTDSTQ-AFAKAWAAACASTESATLYVPKGRYL--L-----GSVAFNGDCKS----SDI 91 (397)
Q Consensus 25 ~~~a~~~~~~v~dfGA~-~dg~tddt~-aiq~Ai~~ac~~~~g~~v~~p~G~Y~--~-----~~l~l~~~~~s----~~v 91 (397)
+..+.+.++.|..-|.. ++|.+.+.+ .||+|++.| .+|++|++.+|+|. + ..+.+.. + +.+
T Consensus 9 s~~~~~~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~~a---~pGdtI~l~~GtY~~~~~e~~~~~i~~~~---sGt~~~pI 82 (400)
T 1ru4_A 9 SGISTKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAV---NPGELILLKPGTYTIPYTQGKGNTITFNK---SGKDGAPI 82 (400)
T ss_dssp TTCCCSCEEEECTTCCTTCCSSSTTSCBCHHHHHHHC---CTTCEEEECSEEEECCCBTTBCCCEEECC---CCBTTBCE
T ss_pred ccccCccEEEEcCCCCCCCCCccccCCccHHHHHhhC---CCCCEEEECCCeEccccccccceeEEecC---CCCCCCCE
Confidence 44556778888765533 333122222 799999876 67899999999999 2 4455531 2 138
Q ss_pred EEEEcc----EEEeeccccc-cCCCcceEEEEeeeceEEeccEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEe
Q 042768 92 TFRIDG----TLVAPADYRV-LGQADNWLSFEGVSGVSIIGGALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRING 166 (397)
Q Consensus 92 ~l~~~G----~l~~~~~~~~-~~~~~~~i~~~~~~nv~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~ 166 (397)
+|...+ +|. ...... +......+.+ ..++++|+|-+|...+. ..|.+.. .+.+|++
T Consensus 83 ti~~~~g~~~vI~-~~~~~g~~~~~~~~i~i-~~~~~~i~gl~I~n~g~----------------~GI~v~g-s~~~i~n 143 (400)
T 1ru4_A 83 YVAAANCGRAVFD-FSFPDSQWVQASYGFYV-TGDYWYFKGVEVTRAGY----------------QGAYVIG-SHNTFEN 143 (400)
T ss_dssp EEEEGGGCCEEEE-CCCCTTCCCTTCCSEEE-CSSCEEEESEEEESCSS----------------CSEEECS-SSCEEES
T ss_pred EEEEecCCCCEEe-CCccCCccccceeEEEE-ECCeEEEEeEEEEeCCC----------------CcEEEeC-CCcEEEe
Confidence 888763 333 211000 1000022444 36778888855543332 1466665 7889999
Q ss_pred eeEecCcceEEEEecee-cEEEEeEEEECCCC----CCCCCcceeece--eeEEEEecEEec-CCeeEEeCCCCeeEEEE
Q 042768 167 LLSLNSQMFHIVINGCK-DVHVEGVTVIAPGN----SPNTDGIHVQLS--MNVKITNCTIKT-GDDCIPIGPGTKNLWIE 238 (397)
Q Consensus 167 v~i~~~~~~~i~~~~~~-~v~i~n~~i~~~~~----~~~~DGi~~~~s--~nv~I~n~~i~~-~dD~i~i~~~~~ni~i~ 238 (397)
+++.+....+|.+.... +.+|+++++....+ ..+.|||.+..+ ++.+|++|++.. .||++.+......++|+
T Consensus 144 ~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~~~~~v~i~ 223 (400)
T 1ru4_A 144 TAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVIE 223 (400)
T ss_dssp CEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCEEE
T ss_pred EEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCCcEEEEecCCCEEEE
Confidence 99999887789988744 88999999997543 246799988643 788999999986 78999997667789999
Q ss_pred eeEEeC--------------CCeEEEeeccccCCcCcEEEEEEEeeEEECC-cceEEEEeecCCCCceEEcEEEEeeeec
Q 042768 239 RVTCGP--------------GHGISIGSLAKDLVEEGVQNVTVFKTVFTGT-TNGFRIKSWARPSNGFVQGVRFIDAVMR 303 (397)
Q Consensus 239 n~~~~~--------------~~gi~igs~~~~~~~~~v~ni~i~n~~~~~~-~~gi~i~s~~~~~~g~v~nI~~~ni~~~ 303 (397)
||..+. +.|+.+|++ ....+.+|+||...+. ..|+.....+ .+++++|+++.
T Consensus 224 nn~a~~Ng~~~~~~n~~~gngnGf~lgg~------~~~~~~~v~nn~a~~N~~~G~~~n~~~-------~~~~i~nNt~~ 290 (400)
T 1ru4_A 224 NSWAFRNGINYWNDSAFAGNGNGFKLGGN------QAVGNHRITRSVAFGNVSKGFDQNNNA-------GGVTVINNTSY 290 (400)
T ss_dssp SCEEESTTCCCSCCTTCCCCCCSEECCCT------TCCCCCEEESCEEESCSSEEEECTTCS-------SCCEEESCEEE
T ss_pred eEEEECCccccccccccccCCCCEEEecc------CCcCCEEEEeeEEECCcCcCEeecCCC-------CCEEEECeEEE
Confidence 998752 236777654 2345788999998876 4577553221 23677777776
Q ss_pred cCcccEEEE
Q 042768 304 NVQFPIVID 312 (397)
Q Consensus 304 ~~~~~i~i~ 312 (397)
+....+.+.
T Consensus 291 ~N~~~~~~~ 299 (400)
T 1ru4_A 291 KNGINYGFG 299 (400)
T ss_dssp SSSEEEEEC
T ss_pred CCccceEEe
Confidence 655555554
No 37
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.38 E-value=3.5e-11 Score=116.72 Aligned_cols=167 Identities=13% Similarity=0.115 Sum_probs=103.0
Q ss_pred eeeceEEeccEEecCCCcccccccCCCCCCCCceeEEEEccC-CeEEEeeeEecCcceEEEEeceecEEEEeEEEECCCC
Q 042768 119 GVSGVSIIGGALDAKGSSLWACKASGTNCPDGATTLSFTNSN-NIRINGLLSLNSQMFHIVINGCKDVHVEGVTVIAPGN 197 (397)
Q Consensus 119 ~~~nv~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~-nv~I~~v~i~~~~~~~i~~~~~~~v~i~n~~i~~~~~ 197 (397)
++++++|+|-++.... ...|++..|. ++.++++.+.+....++.+..|++.+|+++++..
T Consensus 132 ~~~nv~I~~~~i~n~~----------------~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~--- 192 (377)
T 2pyg_A 132 ADRDVTIERVEVREMS----------------GYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYA--- 192 (377)
T ss_dssp CEEEEEEEEEEEECCS----------------SCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEES---
T ss_pred cccceEEEeEEEEecc----------------cceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEc---
Confidence 5788999884433111 1236666554 6777777777777777888888888888876665
Q ss_pred CCCCCcceeec-eeeEEEEecEEecCCeeEEeC-------CCCeeEEEEeeEEeC--CCeEEEeeccc--------cCC-
Q 042768 198 SPNTDGIHVQL-SMNVKITNCTIKTGDDCIPIG-------PGTKNLWIERVTCGP--GHGISIGSLAK--------DLV- 258 (397)
Q Consensus 198 ~~~~DGi~~~~-s~nv~I~n~~i~~~dD~i~i~-------~~~~ni~i~n~~~~~--~~gi~igs~~~--------~~~- 258 (397)
.+.|||++.. |++++|+|+.+...++++.+. ..+++++|++++++. ++|+.+..... ...
T Consensus 193 -~~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~~~~~v~i~~N~i~~~~ 271 (377)
T 2pyg_A 193 -NDRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLEDLALPSNILIDGGAYYDNAREGVLLKMTSDITLQNADIHGNG 271 (377)
T ss_dssp -CSSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSSCCCCCEEEEEESCEEESCSSCSEEEEEEEEEEEESCEEESCS
T ss_pred -cccCcEEEEeccCCeEEECCEEECccCceEEEeccccCCCCCccEEEECCEEEcCccCceEeccccCeEEECCEEECCC
Confidence 3567888766 778888888887777776661 235666666666554 23443321100 000
Q ss_pred c-----CcEEEEEEEeeEEECCcce-----EEEEeecCCCCce------EEcEEEEeeeeccCc
Q 042768 259 E-----EGVQNVTVFKTVFTGTTNG-----FRIKSWARPSNGF------VQGVRFIDAVMRNVQ 306 (397)
Q Consensus 259 ~-----~~v~ni~i~n~~~~~~~~g-----i~i~s~~~~~~g~------v~nI~~~ni~~~~~~ 306 (397)
. .+.++++|+|++|.++..+ +.+..+.. ..+. -++++++++++.+..
T Consensus 272 ~~GI~i~g~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~i~~N~i~g~~ 334 (377)
T 2pyg_A 272 SSGVRVYGAQDVQILDNQIHDNAQAAAVPEVLLQSFDD-TAGASGTYYTTLNTRIEGNTISGSA 334 (377)
T ss_dssp SCSEEEEEEEEEEEESCEEESCCSSSSCCSEEEECEEE-TTSSSCEEECCBCCEEESCEEECCS
T ss_pred CceEEEecCCCcEEECcEEECCcccccccceEEEEecC-CCccceeeeeccCeEEECCEEECcC
Confidence 0 1367999999999986432 23332211 1111 378999999998843
No 38
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.35 E-value=1.1e-11 Score=126.18 Aligned_cols=94 Identities=18% Similarity=0.280 Sum_probs=70.7
Q ss_pred ceeEEeeccCccCCCccchHHHHHHHHHHHhhcCCCcEEEEcCcEEEec-ceeecCCCCCcceEEEEcc--EEEeec-cc
Q 042768 30 TTTYNVLSFGAKGNGVTDSTQAFAKAWAAACASTESATLYVPKGRYLLG-SVAFNGDCKSSDITFRIDG--TLVAPA-DY 105 (397)
Q Consensus 30 ~~~~~v~dfGA~~dg~tddt~aiq~Ai~~ac~~~~g~~v~~p~G~Y~~~-~l~l~~~~~s~~v~l~~~G--~l~~~~-~~ 105 (397)
...++|+||||+|||++|||+|||+||+++ .++.+||||+|+|++. +|.++ + +++|.+++ +|.... .+
T Consensus 398 ~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa---~~g~~v~~P~G~Y~vt~Ti~ip----~-~~~ivG~~~~~I~~~G~~F 469 (758)
T 3eqn_A 398 SDFVSVRSQGAKGDGHTDDTQAIKNVFAKY---AGCKIIFFDAGTYIVTDTIQIP----A-GTQIVGEVWSVIMGTGSKF 469 (758)
T ss_dssp GGEEETTTTTCCCEEEEECHHHHHHHHHHH---TTTSEEECCSEEEEESSCEEEC----T-TCEEECCSSEEEEECSGGG
T ss_pred cceEEeeeccccCCCCchhHHHHHHHHHHh---cCCCEEEECCCEeEECCeEEcC----C-CCEEEecccceEecCCccc
Confidence 358999999999999999999999999855 5688999999999976 68887 5 89999987 666533 12
Q ss_pred cccCCCcceEEE---EeeeceEEeccEEe
Q 042768 106 RVLGQADNWLSF---EGVSGVSIIGGALD 131 (397)
Q Consensus 106 ~~~~~~~~~i~~---~~~~nv~I~GG~id 131 (397)
.+...+.+++.. .....|.|.|-.++
T Consensus 470 ~d~~~P~pvv~VG~~gd~G~veisdl~~~ 498 (758)
T 3eqn_A 470 TDYNNPQPVIQVGAPGSSGVVEITDMIFT 498 (758)
T ss_dssp CCTTSCEEEEEESCTTCBSCEEEESCEEE
T ss_pred cCCCCCeeeEEeCCCCCCCeEEEEeEEEE
Confidence 333334556665 23457777774444
No 39
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.35 E-value=6e-11 Score=117.93 Aligned_cols=178 Identities=10% Similarity=0.050 Sum_probs=106.2
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEEcCcEEEecceeecCC-CCCcceEEEEc--c--EEEeeccccccCCCcceEEEEeeec
Q 042768 48 STQAFAKAWAAACASTESATLYVPKGRYLLGSVAFNGD-CKSSDITFRID--G--TLVAPADYRVLGQADNWLSFEGVSG 122 (397)
Q Consensus 48 dt~aiq~Ai~~ac~~~~g~~v~~p~G~Y~~~~l~l~~~-~~s~~v~l~~~--G--~l~~~~~~~~~~~~~~~i~~~~~~n 122 (397)
+.+.||+||+.| .+|++|++++|+|.-..+.+.+. ...+.++|..+ + +|.+. ..+.+. .++
T Consensus 30 ~~~~Lq~Ai~~A---~pGDtI~L~~GtY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~----------~~l~i~-g~~ 95 (506)
T 1dbg_A 30 SNETLYQVVKEV---KPGGLVQIADGTYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGD----------AKVELR-GEH 95 (506)
T ss_dssp SHHHHHHHHHHC---CTTCEEEECSEEEETCEEEECCCCBTTBCEEEEESSTTSEEEEES----------CEEEEC-SSS
T ss_pred CHHHHHHHHHhC---CCCCEEEECCCEEecceEEEecCCcCCCCEEEECCCCCccEEeCC----------ceEEEE-cCC
Confidence 456799999876 78899999999998546666210 00115777775 2 23221 123333 477
Q ss_pred eEEeccEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcce-EEEEe--------ceecEEEEeEEEE
Q 042768 123 VSIIGGALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQMF-HIVIN--------GCKDVHVEGVTVI 193 (397)
Q Consensus 123 v~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~~-~i~~~--------~~~~v~i~n~~i~ 193 (397)
++|+|-++.+.+...... + ...+..+.+. .++++|++++|.+...- .+.+. .+++.+|+++.|.
T Consensus 96 v~i~GL~i~~~~~~~~~~-~-----~~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I~ 168 (506)
T 1dbg_A 96 LILEGIWFKDGNRAIQAW-K-----SHGPGLVAIY-GSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFT 168 (506)
T ss_dssp EEEESCEEEEECCCTTTC-C-----TTSCCSEEEC-SSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEEE
T ss_pred EEEECeEEECCCcceeee-e-----cccccceEEe-cCCeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEEE
Confidence 777775554433210000 0 0112334444 58889999999875321 02222 5667789999999
Q ss_pred CCCCCCCCC----cceeec-------eeeEEEEecEEecC------CeeEEeCC---CCeeEEEEeeEEeCCC
Q 042768 194 APGNSPNTD----GIHVQL-------SMNVKITNCTIKTG------DDCIPIGP---GTKNLWIERVTCGPGH 246 (397)
Q Consensus 194 ~~~~~~~~D----Gi~~~~-------s~nv~I~n~~i~~~------dD~i~i~~---~~~ni~i~n~~~~~~~ 246 (397)
+........ ||+++. +.+.+|+++.|... -+.+.++. .+++.+|+|+.|...+
T Consensus 169 Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~~~~N~~e~iR~G~h~m~s~~~~VenN~f~~~~ 241 (506)
T 1dbg_A 169 DKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQD 241 (506)
T ss_dssp CCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECCCSSSCCCSEEECSSTTCBCCCEEESCEEEEEC
T ss_pred CCcCcceEEecCceeEeccCcccccccCCeEEeCcEEcccccCCCccccEEEEEEecccCCcEEECCEEEecc
Confidence 854333333 777775 35888999998853 24455542 2468888888887543
No 40
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.29 E-value=5.4e-11 Score=118.52 Aligned_cols=226 Identities=12% Similarity=0.018 Sum_probs=146.1
Q ss_pred ceEEEEccEEEeeccccccCC-----CcceEEEEeeeceEEeccEEecCCCcccccccCCCCCCCCceeEEE---EccCC
Q 042768 90 DITFRIDGTLVAPADYRVLGQ-----ADNWLSFEGVSGVSIIGGALDAKGSSLWACKASGTNCPDGATTLSF---TNSNN 161 (397)
Q Consensus 90 ~v~l~~~G~l~~~~~~~~~~~-----~~~~i~~~~~~nv~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~---~~~~n 161 (397)
+++|.+.|+|-+... ..|+. .++++.+.+++ |+|-++... .+.| .+++ .+|+|
T Consensus 151 NItItG~GtIDGqG~-~wW~~~~~~~~RP~l~f~~c~---I~GITi~NS-DP~w--------------~I~iG~~~~c~N 211 (600)
T 2x6w_A 151 NCHIYGHGVVDFGGY-EFGASSQLRNGVAFGRSYNCS---VTGITFQNG-DVTW--------------AITLGWNGYGSN 211 (600)
T ss_dssp EEEEESSCEEECTTC-CCSSTTCCEEEEECCSEEEEE---EESCEEESC-CCSC--------------SEEECBTTBEEE
T ss_pred eEEEecceeeeCCcc-ccccccccCCCCCEEEEeeeE---EeCeEEECC-CCcc--------------EEEeCCCCCccc
Confidence 788888888876432 22221 12334444444 777333321 1222 4888 89999
Q ss_pred eEEEeee----EecCc-ceEEEEeceecEEEEeEEEECCCCCCCCCccee-ecee--eEEEEecEEecCCeeEEeCC---
Q 042768 162 IRINGLL----SLNSQ-MFHIVINGCKDVHVEGVTVIAPGNSPNTDGIHV-QLSM--NVKITNCTIKTGDDCIPIGP--- 230 (397)
Q Consensus 162 v~I~~v~----i~~~~-~~~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~-~~s~--nv~I~n~~i~~~dD~i~i~~--- 230 (397)
++|++++ +.+++ ..|+ |+|+|++|.+ ..|+|.+ .+.+ ++.++ .+..+..+|++++
T Consensus 212 VtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~t-----GDDCIAI~KSGs~~ni~~e--~~~~GHgGISIGSe~~ 277 (600)
T 2x6w_A 212 CYVRKCRFINLVNSSVNADHS-------TVYVNCPYSG-----VESCYFSMSSSFARNIACS--VQLHQHDTFYRGSTVN 277 (600)
T ss_dssp EEEESCEEECCCCCSSCCCEE-------EEEECSSSEE-----EESCEEECCCTTHHHHEEE--EEECSSSEEEESCEEE
T ss_pred EEEeCeEEcceEecCCCCCEE-------EEEEeeEEec-----CCcEEEEecCCCcCCeEEE--EEcCCCCcEEeccccc
Confidence 9999999 76644 2466 8999999987 4588999 6543 45666 5666778999988
Q ss_pred -CCeeEEEEeeEEeCCCeEEEeeccccCCcCcEEEEEEEeeEEECCcceEEEEeecC-CCCceEEcEEEEeeeeccCcc-
Q 042768 231 -GTKNLWIERVTCGPGHGISIGSLAKDLVEEGVQNVTVFKTVFTGTTNGFRIKSWAR-PSNGFVQGVRFIDAVMRNVQF- 307 (397)
Q Consensus 231 -~~~ni~i~n~~~~~~~gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~~~-~~~g~v~nI~~~ni~~~~~~~- 307 (397)
+.+||+|+| ++. +.. +..+.++||+|+|++|.+...++.+...+. ...+.++||+|+||+.+....
T Consensus 278 ggV~NV~V~N-rIK--------t~~--G~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnItfkNItgTsas~a 346 (600)
T 2x6w_A 278 GYCRGAYVVM-HAA--------EAA--GAGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDVIVSGNIVSIGERA 346 (600)
T ss_dssp EESEEEEEEE-CGG--------GCT--TTCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEEEEESCEEEECSCC
T ss_pred CcEEEEEEEE-EEE--------eec--CCCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEEEEEeEEEEecccc
Confidence 367888888 332 221 123569999999999999988888876422 245789999999999976432
Q ss_pred ------cEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEeecC---C-ceEEEecCCCCceecEEEEeEE
Q 042768 308 ------PIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTSAT---P-IAIKFDCSPKYPCQGIRLQNIN 368 (397)
Q Consensus 308 ------~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~---~-~~~~i~~~~~~~i~~i~~~nv~ 368 (397)
+..|..... .| ......+|++|+|+|++..... . +++.+ ...+++|+|.+-.
T Consensus 347 av~~~~g~~i~g~p~----~~-~~~~~~~Ie~V~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~~~~~~ 408 (600)
T 2x6w_A 347 AFSAPFGAFIDIGPD----NS-GASNVQDIQRVLVTGNSFYAPANITDSAAITL----RANLNGCTFIANN 408 (600)
T ss_dssp TTSSSCEEEEEECCC----TT-CCSSSCCEEEEEEESCEEECCTTCSSEEEEEE----CSCBSCEEEESCE
T ss_pred ccccccceEEEecCc----cc-ccccccceeEEEEeceEEEcCCccCCCcceee----eccccceEEecCc
Confidence 244554321 11 1124458999999999986532 1 12222 3456677776554
No 41
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=98.87 E-value=4.2e-08 Score=93.41 Aligned_cols=150 Identities=15% Similarity=0.236 Sum_probs=79.3
Q ss_pred chHHHHHHHHHHHhhcCCCc---EEEEcCcEEEecceeecCCCCCcceEEEEcc---EEEeeccccccCCCcceEEEEee
Q 042768 47 DSTQAFAKAWAAACASTESA---TLYVPKGRYLLGSVAFNGDCKSSDITFRIDG---TLVAPADYRVLGQADNWLSFEGV 120 (397)
Q Consensus 47 ddt~aiq~Ai~~ac~~~~g~---~v~~p~G~Y~~~~l~l~~~~~s~~v~l~~~G---~l~~~~~~~~~~~~~~~i~~~~~ 120 (397)
-+-..||+||+++ +.+. +|+|++|+|.- .+.+. |. +++|+++| ++....+..
T Consensus 42 g~f~TIq~Ai~aa---~~~~~~~~I~I~~G~Y~E-~v~I~---k~-~itl~G~g~~~TiIt~~~~~-------------- 99 (364)
T 3uw0_A 42 DEFSSINAALKSA---PKDDTPFIIFLKNGVYTE-RLEVA---RS-HVTLKGENRDGTVIGANTAA-------------- 99 (364)
T ss_dssp --CCCHHHHHHHS---CSSSSCEEEEECSEEECC-CEEEC---ST-TEEEEESCTTTEEEEECCCT--------------
T ss_pred CCcccHHHHHhhc---ccCCCcEEEEEeCCEEEE-EEEEc---CC-eEEEEecCCCCeEEEccccc--------------
Confidence 3456699999876 3333 89999999984 45664 24 78888775 222111000
Q ss_pred eceEEeccEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcc--------------------eEEEEe
Q 042768 121 SGVSIIGGALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQM--------------------FHIVIN 180 (397)
Q Consensus 121 ~nv~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~--------------------~~i~~~ 180 (397)
+....++..+ ...+...+. ..++++++++++|.|... -.+.+.
T Consensus 100 -------~~~~~~g~~~---------gt~~saTv~-V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~ 162 (364)
T 3uw0_A 100 -------GMLNPQGEKW---------GTSGSSTVL-VNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLA 162 (364)
T ss_dssp -------TSBCTTCSBC---------CTTTCCSEE-ECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEEC
T ss_pred -------cccccccccc---------cccCeeEEE-EECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEe
Confidence 0111111110 001111233 356888888888887631 123333
Q ss_pred -ceecEEEEeEEEECCCCCCCCCcceeeceeeEEEEecEEecCCeeEEeCCCCeeEEEEeeEEe
Q 042768 181 -GCKDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCG 243 (397)
Q Consensus 181 -~~~~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~ 243 (397)
.++...+.+|+|.. .-|.+......+..+++|.|...-|-|-= ....+++||++.
T Consensus 163 ~~~D~~~f~~C~f~G-----~QDTLy~~~~gr~yf~~c~I~GtvDFIFG---~a~a~f~~c~i~ 218 (364)
T 3uw0_A 163 ENSDKARFKAVKLEG-----YQDTLYSKTGSRSYFSDCEISGHVDFIFG---SGITVFDNCNIV 218 (364)
T ss_dssp TTCEEEEEEEEEEEC-----SBSCEEECTTCEEEEESCEEEESEEEEEE---SSEEEEESCEEE
T ss_pred cCCCeEEEEeeEEEe-----cccceEeCCCCCEEEEcCEEEcCCCEECC---cceEEEEeeEEE
Confidence 35666666666665 23455554334566666666654444432 235666666654
No 42
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.83 E-value=3.6e-07 Score=86.85 Aligned_cols=76 Identities=25% Similarity=0.280 Sum_probs=54.7
Q ss_pred CCCcceeeceeeEEEEecEEecC------------------CeeEEeCCCCeeEEEEeeEEeCCC-eEEEeeccccC-Cc
Q 042768 200 NTDGIHVQLSMNVKITNCTIKTG------------------DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDL-VE 259 (397)
Q Consensus 200 ~~DGi~~~~s~nv~I~n~~i~~~------------------dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~~~~~-~~ 259 (397)
..|+|.+.+++||+|++|.|..+ |..+.++.++.+|+|+||+|...+ +.-+|+.-... ..
T Consensus 132 ~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d 211 (355)
T 1pcl_A 132 EWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQD 211 (355)
T ss_pred cCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccc
Confidence 46888888889999999999853 555667777899999999998654 56666642111 11
Q ss_pred CcEEEEEEEeeEEECC
Q 042768 260 EGVQNVTVFKTVFTGT 275 (397)
Q Consensus 260 ~~v~ni~i~n~~~~~~ 275 (397)
.+..+|+|.+|.|.++
T Consensus 212 ~g~~~vT~hhN~f~~~ 227 (355)
T 1pcl_A 212 SGKLRVTFHNNVFDRV 227 (355)
T ss_pred cCcceEEEECcEEeCC
Confidence 1344799999999875
No 43
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.69 E-value=4.4e-07 Score=86.11 Aligned_cols=114 Identities=15% Similarity=0.130 Sum_probs=71.6
Q ss_pred EEEEccCCeEEEeeeEecCcc-eEEEE-eceecEEEEeEEEECCCCCCCCCcceeeceeeEEEEecEEecCCeeE-EeCC
Q 042768 154 LSFTNSNNIRINGLLSLNSQM-FHIVI-NGCKDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKTGDDCI-PIGP 230 (397)
Q Consensus 154 i~~~~~~nv~I~~v~i~~~~~-~~i~~-~~~~~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i-~i~~ 230 (397)
|.+.+++||.|++++|++... +.-.+ ..... +.-.+ .....|||.+.++++|.|++|.|..+.|++ .++.
T Consensus 108 i~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~----~~g~~---~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~ 180 (346)
T 1pxz_A 108 LFMRKVSHVILHSLHIHGCNTSVLGDVLVSESI----GVEPV---HAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTL 180 (346)
T ss_dssp EEEESCEEEEEESCEEECCCCCCSEEEEEETTT----EEEEE---CCCCCCSEEEESCEEEEEESCEEECCSSEEEEEES
T ss_pred EEEEccCCEEEEeeEEEeeccCCCceEEeccCc----ccccc---cCCCCCEEEEecCceEEEEeeEEecCCCCcEeecc
Confidence 666677888888888876521 10000 00000 00000 124678999999999999999999876665 6766
Q ss_pred CCeeEEEEeeEEeCCC-eEEEeeccccCCcCcEEEEEEEeeEE-ECC
Q 042768 231 GTKNLWIERVTCGPGH-GISIGSLAKDLVEEGVQNVTVFKTVF-TGT 275 (397)
Q Consensus 231 ~~~ni~i~n~~~~~~~-gi~igs~~~~~~~~~v~ni~i~n~~~-~~~ 275 (397)
++.+|+|+||.|...+ ++-+|+.-... .....+|++.++.| .+.
T Consensus 181 ~s~~vTISnn~f~~H~k~~l~G~sd~~~-~d~~~~vT~~~N~f~~~~ 226 (346)
T 1pxz_A 181 GSTGITISNNHFFNHHKVMLLGHDDTYD-DDKSMKVTVAFNQFGPNA 226 (346)
T ss_dssp SCEEEEEESCEEESEEEEEEESCCSSCG-GGGGCEEEEESCEECSSE
T ss_pred CcceEEEEeeEEecCCceeEECCCCccc-cCCceEEEEEeeEEeCCc
Confidence 6899999999998643 56676642111 11234788999988 554
No 44
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.66 E-value=1.2e-06 Score=82.52 Aligned_cols=76 Identities=20% Similarity=0.150 Sum_probs=49.6
Q ss_pred CCCcceeeceeeEEEEecEEecC-CeeEEeCCCCeeEEEEeeEEeCCC-eEEEeeccccC--CcCcEEEEEEEeeEEECC
Q 042768 200 NTDGIHVQLSMNVKITNCTIKTG-DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDL--VEEGVQNVTVFKTVFTGT 275 (397)
Q Consensus 200 ~~DGi~~~~s~nv~I~n~~i~~~-dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~~~~~--~~~~v~ni~i~n~~~~~~ 275 (397)
..|+|.+..++||.|++|.+..+ |..+.+..++.+|+|+||.|.... +.-+|+.-... ...+-.+|++.++.+.++
T Consensus 115 ~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~ 194 (340)
T 3zsc_A 115 DFDYINVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNL 194 (340)
T ss_dssp CCCSEEEESCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESC
T ss_pred CCCeEEEecCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEecCC
Confidence 56788888888888888888874 555777766788888888887643 45555531000 000123678888877764
No 45
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.65 E-value=9.4e-07 Score=83.38 Aligned_cols=93 Identities=13% Similarity=0.123 Sum_probs=45.9
Q ss_pred ceecEEEEeEEEECCCCCCCCCcceee-----ceeeEEEEecEEecC------------CeeEEeCCCCeeEEEEeeEEe
Q 042768 181 GCKDVHVEGVTVIAPGNSPNTDGIHVQ-----LSMNVKITNCTIKTG------------DDCIPIGPGTKNLWIERVTCG 243 (397)
Q Consensus 181 ~~~~v~i~n~~i~~~~~~~~~DGi~~~-----~s~nv~I~n~~i~~~------------dD~i~i~~~~~ni~i~n~~~~ 243 (397)
.++||.|+|++|+........|+|.+. .++||+|++|.|..+ |..+.++.++.+|+|+||.|.
T Consensus 93 ~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~ 172 (330)
T 2qy1_A 93 NAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVY 172 (330)
T ss_dssp SCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEESCEEE
T ss_pred CCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEEEcceec
Confidence 344455555555442211245666666 366666666666421 344555555666666666665
Q ss_pred CCC-eEEEeeccccCCcCcEEEEEEEeeEEEC
Q 042768 244 PGH-GISIGSLAKDLVEEGVQNVTVFKTVFTG 274 (397)
Q Consensus 244 ~~~-gi~igs~~~~~~~~~v~ni~i~n~~~~~ 274 (397)
+.+ +.-+|+.-..... ...+|+|.++.|.+
T Consensus 173 ~h~k~~L~G~sd~~~~~-~~~~vT~h~N~f~~ 203 (330)
T 2qy1_A 173 NYQKVALNGYSDSDTKN-SAARTTYHHNRFEN 203 (330)
T ss_dssp EEEECCEESSSTTCGGG-GGCEEEEESCEEEE
T ss_pred cCCeEEEECCCCccccC-CCceEEEECcEEcC
Confidence 432 3444442111000 11356666666654
No 46
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.65 E-value=4.9e-07 Score=86.11 Aligned_cols=90 Identities=17% Similarity=0.148 Sum_probs=60.3
Q ss_pred EEEe-ceecEEEEeEEEECC--CCCCCCCcceeeceeeEEEEecEEec-CCeeEEe-CCCCeeEEEEeeEEeCC------
Q 042768 177 IVIN-GCKDVHVEGVTVIAP--GNSPNTDGIHVQLSMNVKITNCTIKT-GDDCIPI-GPGTKNLWIERVTCGPG------ 245 (397)
Q Consensus 177 i~~~-~~~~v~i~n~~i~~~--~~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~i-~~~~~ni~i~n~~~~~~------ 245 (397)
+.+. .++||.|+|++|+.. ......|+|.+..++||+|++|.+.. +|..+.. ..++.+|+|+||.|...
T Consensus 126 l~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~ 205 (359)
T 1idk_A 126 LRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSAT 205 (359)
T ss_dssp EEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTT
T ss_pred EEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCcccccc
Confidence 4444 456667777766652 11135689999889999999999986 5666654 44588999999999632
Q ss_pred ----C--eEEE-eeccccCCcCcEEEEEEEeeEEECC
Q 042768 246 ----H--GISI-GSLAKDLVEEGVQNVTVFKTVFTGT 275 (397)
Q Consensus 246 ----~--gi~i-gs~~~~~~~~~v~ni~i~n~~~~~~ 275 (397)
| +..+ |+ -.+++|.++.+.+.
T Consensus 206 ~~G~h~~~~~L~G~---------sd~vT~hhN~f~~~ 233 (359)
T 1idk_A 206 CDGYHYWAIYLDGD---------ADLVTMKGNYIYHT 233 (359)
T ss_dssp SSSBBSCCEEECCS---------SCEEEEESCEEESB
T ss_pred cCccccceEEEEec---------CCCeEEEceEeecC
Confidence 1 2222 22 13788888888865
No 47
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.64 E-value=2.4e-06 Score=80.06 Aligned_cols=139 Identities=12% Similarity=0.103 Sum_probs=85.4
Q ss_pred EEeceecEEEEeEEEECCCCCCCCCcceeec-eeeEEEEecEEec----------CCeeEEeCCCCeeEEEEeeEEeCCC
Q 042768 178 VINGCKDVHVEGVTVIAPGNSPNTDGIHVQL-SMNVKITNCTIKT----------GDDCIPIGPGTKNLWIERVTCGPGH 246 (397)
Q Consensus 178 ~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~~-s~nv~I~n~~i~~----------~dD~i~i~~~~~ni~i~n~~~~~~~ 246 (397)
.+..++||.|+|++|+... ....|+|.+.. ++||+|++|.|.. .|..+.++.++.+|+|+||.|.+.+
T Consensus 98 ~i~~a~NVIIrNl~i~~~~-~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~ 176 (326)
T 3vmv_A 98 RLSNAHNIIIQNVSIHHVR-EGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHW 176 (326)
T ss_dssp EEESEEEEEEESCEEECCC-STTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEE
T ss_pred EEEecceEEEECeEEEcCC-CCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCc
Confidence 3345566666666666543 24678999986 8999999999962 3667888888999999999998643
Q ss_pred -eEEEeeccccCCcCcEEEEEEEeeEEECCc-ceEEEEeecCCCCceEEcEEEEeeeeccCcccEEEEeecCCCCCCCCC
Q 042768 247 -GISIGSLAKDLVEEGVQNVTVFKTVFTGTT-NGFRIKSWARPSNGFVQGVRFIDAVMRNVQFPIVIDQNYCPHNLNCPG 324 (397)
Q Consensus 247 -gi~igs~~~~~~~~~v~ni~i~n~~~~~~~-~gi~i~s~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~ 324 (397)
+.-+|+.-... ..-.+|++.++.+.++. +..+++. +...+.|=.|.|.. .+++...+
T Consensus 177 k~~LiG~sd~~~--~~~~~vT~~~N~f~~~~~R~Pr~r~----G~~Hv~NN~~~n~~----~~~~~~~~----------- 235 (326)
T 3vmv_A 177 KTMLVGHTDNAS--LAPDKITYHHNYFNNLNSRVPLIRY----ADVHMFNNYFKDIN----DTAINSRV----------- 235 (326)
T ss_dssp ECEEECSSSCGG--GCCEEEEEESCEEEEEEECTTEEES----CEEEEESCEEEEES----SCSEEEET-----------
T ss_pred eEEEECCCCCCc--ccCccEEEEeeEecCCcCcCCcccC----CcEEEEccEEECCC----ceEEeecC-----------
Confidence 56676641110 11257999999987642 1223321 12233333444332 23443331
Q ss_pred CCcceEEEeEEEEeE
Q 042768 325 QVSGVKISDVIYQDI 339 (397)
Q Consensus 325 ~~~~~~i~nI~~~ni 339 (397)
.....+|+-.|++.
T Consensus 236 -~a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 236 -GARVFVENNYFDNV 249 (326)
T ss_dssp -TCEEEEESCEEEEE
T ss_pred -CcEEEEEceEEECC
Confidence 13457888888887
No 48
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.61 E-value=2.7e-06 Score=80.07 Aligned_cols=135 Identities=11% Similarity=0.087 Sum_probs=96.6
Q ss_pred eeEEEEccCCeEEEeeeEecC-----------cceEEEEeceecEEEEeEEEECCCCCCCCCc-ceee-ceeeEEEEecE
Q 042768 152 TTLSFTNSNNIRINGLLSLNS-----------QMFHIVINGCKDVHVEGVTVIAPGNSPNTDG-IHVQ-LSMNVKITNCT 218 (397)
Q Consensus 152 ~~i~~~~~~nv~I~~v~i~~~-----------~~~~i~~~~~~~v~i~n~~i~~~~~~~~~DG-i~~~-~s~nv~I~n~~ 218 (397)
..|.+.+++||.|++++|++. ...+|.+..+++|.|++|++... .|| +++. .+++|+|++|.
T Consensus 83 ~Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~-----~Dg~idi~~~s~~vTISnn~ 157 (340)
T 3zsc_A 83 GGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNG-----NDGAVDIKKYSNYITVSWNK 157 (340)
T ss_dssp EEEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESC-----SSCSEEEETTCEEEEEESCE
T ss_pred CceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccC-----CccceEEecCCceEEEECcE
Confidence 358889999999999999875 34579999999999999999973 566 6775 58999999999
Q ss_pred EecCCeeEEeCCCC----------eeEEEEeeEEeCCC--eEEEeeccccCCcCcEEEEEEEeeEEECC---------cc
Q 042768 219 IKTGDDCIPIGPGT----------KNLWIERVTCGPGH--GISIGSLAKDLVEEGVQNVTVFKTVFTGT---------TN 277 (397)
Q Consensus 219 i~~~dD~i~i~~~~----------~ni~i~n~~~~~~~--gi~igs~~~~~~~~~v~ni~i~n~~~~~~---------~~ 277 (397)
|...+-+.-++... .+|++.+|.|.+.. .-++.. + .+++-|+.+.+. ..
T Consensus 158 f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r~-------G---~~Hv~NN~~~n~~~~~~~~~~~~ 227 (340)
T 3zsc_A 158 FVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIRF-------G---MAHVFNNFYSMGLRTGVSGNVFP 227 (340)
T ss_dssp EESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESCCBCTTEEES-------S---EEEEESCEEECCCCCSCSSCCSC
T ss_pred eccCceeeEeCcCCCCccccccCCcEEEEECeEecCCCCCCCcccC-------C---eEEEEccEEECCcccccccccee
Confidence 99876666666521 38999999997532 222210 1 478999999981 11
Q ss_pred eEEEEeecCCCCceEEcEEEEeeeeccCcc
Q 042768 278 GFRIKSWARPSNGFVQGVRFIDAVMRNVQF 307 (397)
Q Consensus 278 gi~i~s~~~~~~g~v~nI~~~ni~~~~~~~ 307 (397)
+-.+....+ ..|.+++..+++...
T Consensus 228 ~yai~~~~~------a~i~~E~N~F~~~~~ 251 (340)
T 3zsc_A 228 IYGVASAMG------AKVHVEGNYFMGYGA 251 (340)
T ss_dssp CEEEEEETT------CEEEEESCEEECSCH
T ss_pred eeeEecCCC------CEEEEECcEEECCCc
Confidence 223333322 246777777777665
No 49
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.61 E-value=1.8e-06 Score=82.26 Aligned_cols=63 Identities=22% Similarity=0.156 Sum_probs=38.1
Q ss_pred ceecEEEEeEEEECCCC--CCCCCcceeeceeeEEEEecEEec-CCeeEE-eCCCCeeEEEEeeEEe
Q 042768 181 GCKDVHVEGVTVIAPGN--SPNTDGIHVQLSMNVKITNCTIKT-GDDCIP-IGPGTKNLWIERVTCG 243 (397)
Q Consensus 181 ~~~~v~i~n~~i~~~~~--~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~-i~~~~~ni~i~n~~~~ 243 (397)
.++||.|+|++|+.... ....|+|.+..+++|+|++|.+.. +|..+. ...++.+|+|+||.|.
T Consensus 131 ~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~ 197 (359)
T 1qcx_A 131 GAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLID 197 (359)
T ss_dssp TCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEE
T ss_pred CCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEec
Confidence 34444444444443211 124577888777888888888876 444442 2335778888888886
No 50
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.60 E-value=8.4e-07 Score=84.27 Aligned_cols=13 Identities=31% Similarity=0.202 Sum_probs=9.5
Q ss_pred chHHHHHHHHHHH
Q 042768 47 DSTQAFAKAWAAA 59 (397)
Q Consensus 47 ddt~aiq~Ai~~a 59 (397)
-.-+.|++||+++
T Consensus 24 tt~~~L~~al~~~ 36 (353)
T 1air_A 24 TSMQDIVNIIDAA 36 (353)
T ss_dssp SSHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhh
Confidence 3456899999764
No 51
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.60 E-value=8.9e-07 Score=83.99 Aligned_cols=64 Identities=13% Similarity=0.157 Sum_probs=40.9
Q ss_pred ceEEEEeceecEEEEeEEEECCCCCCCCCcc-ee-eceeeEEEEecEEecCCeeEEeCCC-------CeeEEEEeeEE
Q 042768 174 MFHIVINGCKDVHVEGVTVIAPGNSPNTDGI-HV-QLSMNVKITNCTIKTGDDCIPIGPG-------TKNLWIERVTC 242 (397)
Q Consensus 174 ~~~i~~~~~~~v~i~n~~i~~~~~~~~~DGi-~~-~~s~nv~I~n~~i~~~dD~i~i~~~-------~~ni~i~n~~~ 242 (397)
..+|.+..+++|.|++|++.. ..||+ ++ ..+++|+|++|.|...+.++-+++. ..+|++.+|.|
T Consensus 150 ~DaI~i~~s~nVwIDHcs~s~-----~~Dg~id~~~~s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f 222 (346)
T 1pxz_A 150 GDAITMRNVTNAWIDHNSLSD-----CSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQF 222 (346)
T ss_dssp CCSEEEESCEEEEEESCEEEC-----CSSEEEEEESSCEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEE
T ss_pred CCEEEEecCceEEEEeeEEec-----CCCCcEeeccCcceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEE
Confidence 346777777777777777775 34565 45 4667777777777765555555542 12677777776
No 52
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.57 E-value=1.5e-06 Score=81.45 Aligned_cols=200 Identities=16% Similarity=0.166 Sum_probs=119.9
Q ss_pred hHHHHHHHHHHHhhcCCCc----EEEEcCcEEEecceeecCCCCCcceEEEEccEEEeeccccccCCCcceEEEEeeece
Q 042768 48 STQAFAKAWAAACASTESA----TLYVPKGRYLLGSVAFNGDCKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGVSGV 123 (397)
Q Consensus 48 dt~aiq~Ai~~ac~~~~g~----~v~~p~G~Y~~~~l~l~~~~~s~~v~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv 123 (397)
+-..||+||+++ +.+. +|+|++|+|. ..+.+... |. +++|.++|. +..
T Consensus 18 ~f~TIq~AI~aa---p~~~~~~~~I~I~~G~Y~-E~V~I~~~-k~-~Itl~G~g~----------------------~~t 69 (319)
T 1gq8_A 18 DYKTVSEAVAAA---PEDSKTRYVIRIKAGVYR-ENVDVPKK-KK-NIMFLGDGR----------------------TST 69 (319)
T ss_dssp SBSSHHHHHHHS---CSSCSSCEEEEECSEEEE-CCEEECTT-CC-SEEEEESCT----------------------TTE
T ss_pred CccCHHHHHHhc---cccCCceEEEEEcCCeEe-eeeeccCC-Cc-cEEEEEcCC----------------------Ccc
Confidence 344599999876 4444 9999999998 45666421 23 688877651 111
Q ss_pred EEec-cEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcc------eEEEEeceecEEEEeEEEECCC
Q 042768 124 SIIG-GALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQM------FHIVINGCKDVHVEGVTVIAPG 196 (397)
Q Consensus 124 ~I~G-G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~------~~i~~~~~~~v~i~n~~i~~~~ 196 (397)
.|.+ +.. ..+. ...+...+.+ .++++++++++|.|... .++.+ .++++.+.||+|..
T Consensus 70 iI~~~~~~-~~g~-----------~t~~satv~v-~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-- 133 (319)
T 1gq8_A 70 IITASKNV-QDGS-----------TTFNSATVAA-VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILA-- 133 (319)
T ss_dssp EEEECCCT-TTTC-----------CTGGGCSEEE-CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEEC--
T ss_pred EEEecccc-cCCC-----------CccceEEEEE-ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECc--
Confidence 1221 000 0000 0001123444 48899999999998542 24554 57889999999997
Q ss_pred CCCCCCcceeeceeeEEEEecEEecCCeeEEeCCCCeeEEEEeeEEeCC------Ce-EEEeeccccCCcCcEEEEEEEe
Q 042768 197 NSPNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPG------HG-ISIGSLAKDLVEEGVQNVTVFK 269 (397)
Q Consensus 197 ~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~------~g-i~igs~~~~~~~~~v~ni~i~n 269 (397)
..|++.....+ ..+++|.|...-|-|. + ....+++||++..- .+ |.--+. .....-..+.|.|
T Consensus 134 ---~QDTLy~~~~r-~~~~~c~I~G~vDFIf-G--~~~a~f~~c~i~~~~~~~~~~~~itA~~r---~~~~~~~G~vf~~ 203 (319)
T 1gq8_A 134 ---YQDSLYVHSNR-QFFINCFIAGTVDFIF-G--NAAVVLQDCDIHARRPGSGQKNMVTAQGR---TDPNQNTGIVIQK 203 (319)
T ss_dssp ---STTCEEECSSE-EEEESCEEEESSSCEE-E--SCEEEEESCEEEECCCSTTCCEEEEEECC---CSTTCCCEEEEES
T ss_pred ---cceeeeecCcc-EEEEecEEEeeeeEEe-c--CCcEEEEeeEEEEecCCCCCceEEEeCCC---CCCCCCceEEEEC
Confidence 45677777655 4889999987667664 2 34688999988631 12 322111 1123456789999
Q ss_pred eEEECCcc--------eEEEEeecCCCCceEEcEEEEeeeeccC
Q 042768 270 TVFTGTTN--------GFRIKSWARPSNGFVQGVRFIDAVMRNV 305 (397)
Q Consensus 270 ~~~~~~~~--------gi~i~s~~~~~~g~v~nI~~~ni~~~~~ 305 (397)
|++..... ...+.- .......+.|.+..|.+.
T Consensus 204 c~i~~~~~~~~~~~~~~~yLGR----pW~~~sr~v~~~t~~~~~ 243 (319)
T 1gq8_A 204 SRIGATSDLQPVQSSFPTYLGR----PWKEYSRTVVMQSSITNV 243 (319)
T ss_dssp CEEEECTTTGGGGGGSCEEEEC----CSSTTCEEEEESCEECTT
T ss_pred CEEecCCCccccccceeEEecc----cCCCcceEEEEeccCCCc
Confidence 99986532 233321 112223578888888764
No 53
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.56 E-value=1.3e-06 Score=81.77 Aligned_cols=200 Identities=14% Similarity=0.149 Sum_probs=118.3
Q ss_pred hHHHHHHHHHHHhhcCCCc----EEEEcCcEEEecceeecCCCCCcceEEEEccEEEeeccccccCCCcceEEEEeeece
Q 042768 48 STQAFAKAWAAACASTESA----TLYVPKGRYLLGSVAFNGDCKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGVSGV 123 (397)
Q Consensus 48 dt~aiq~Ai~~ac~~~~g~----~v~~p~G~Y~~~~l~l~~~~~s~~v~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv 123 (397)
+-..||+||++| +.+. +|+|++|+|. ..+.+... |. +++|.++|. +..
T Consensus 14 ~f~TIq~AI~aa---p~~~~~~~~I~I~~G~Y~-E~V~I~~~-k~-~Itl~G~g~----------------------~~t 65 (317)
T 1xg2_A 14 DYQTLAEAVAAA---PDKSKTRYVIYVKRGTYK-ENVEVASN-KM-NLMIVGDGM----------------------YAT 65 (317)
T ss_dssp SBSSHHHHHHHS---CSSCSSCEEEEECSEEEE-CCEEECTT-SC-SEEEEESCT----------------------TTE
T ss_pred CcccHHHHHhhc---ccCCCceEEEEEcCCEEe-eeeecCCC-CC-cEEEEEcCC----------------------CCc
Confidence 344599999876 4444 9999999998 45666421 23 688877651 111
Q ss_pred EEec-cEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcc------eEEEEeceecEEEEeEEEECCC
Q 042768 124 SIIG-GALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQM------FHIVINGCKDVHVEGVTVIAPG 196 (397)
Q Consensus 124 ~I~G-G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~------~~i~~~~~~~v~i~n~~i~~~~ 196 (397)
.|.+ ... ..+. ...+...+.+ .++++++++++|.|... .++.+ .++++.+.||+|..
T Consensus 66 iI~~~~~~-~~g~-----------~t~~satv~v-~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-- 129 (317)
T 1xg2_A 66 TITGSLNV-VDGS-----------TTFRSATLAA-VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDA-- 129 (317)
T ss_dssp EEEECCCT-TTTC-----------CSGGGCSEEE-CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEEC--
T ss_pred EEEecccc-cCCC-----------cccceeEEEE-ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCc--
Confidence 1221 000 0000 0001123444 68899999999988632 24554 57888999999997
Q ss_pred CCCCCCcceeeceeeEEEEecEEecCCeeEEeCCCCeeEEEEeeEEeCC------Ce-EEEeeccccCCcCcEEEEEEEe
Q 042768 197 NSPNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPG------HG-ISIGSLAKDLVEEGVQNVTVFK 269 (397)
Q Consensus 197 ~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~------~g-i~igs~~~~~~~~~v~ni~i~n 269 (397)
..|++.....+ -.+++|.|...-|-|. + ....+++||++..- .+ |.--+. .....-..+.|.|
T Consensus 130 ---~QDTLy~~~~r-~~~~~c~I~G~vDFIf-G--~~~avf~~c~i~~~~~~~~~~~~itA~~r---~~~~~~~G~vf~~ 199 (317)
T 1xg2_A 130 ---YQDTLYAHSQR-QFYRDSYVTGTVDFIF-G--NAAVVFQKCQLVARKPGKYQQNMVTAQGR---TDPNQATGTSIQF 199 (317)
T ss_dssp ---STTCEEECSSE-EEEESCEEEESSSCEE-E--CCEEEEESCEEEECCCSTTCCEEEEEECC---CCTTSCCEEEEES
T ss_pred ---cccceeecCcc-EEEEeeEEEeceeEEc-C--CceEEEeeeEEEEeccCCCCccEEEecCc---CCCCCCcEEEEEC
Confidence 45677776655 4889999987666664 2 23588999988631 12 322111 1123456788999
Q ss_pred eEEECCcc--------eEEEEeecCCCCceEEcEEEEeeeeccC
Q 042768 270 TVFTGTTN--------GFRIKSWARPSNGFVQGVRFIDAVMRNV 305 (397)
Q Consensus 270 ~~~~~~~~--------gi~i~s~~~~~~g~v~nI~~~ni~~~~~ 305 (397)
|++..... ...+.- .......+.|.+..|.+.
T Consensus 200 c~i~~~~~~~~~~~~~~~yLGR----pW~~~sr~v~~~t~~~~~ 239 (317)
T 1xg2_A 200 CNIIASSDLEPVLKEFPTYLGR----PWKEYSRTVVMESYLGGL 239 (317)
T ss_dssp CEEEECTTTGGGTTTSCEEEEC----CSSTTCEEEEESCEECTT
T ss_pred CEEecCCCccccccceeEEeec----ccCCCceEEEEecccCCc
Confidence 99986532 233321 112223578888888764
No 54
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.52 E-value=2.2e-06 Score=80.82 Aligned_cols=168 Identities=15% Similarity=0.129 Sum_probs=109.3
Q ss_pred cCCCcceEEEEeeeceEEeccEEecCCCcccccccCCCCCCCCceeEEEE-ccCCeEEEeeeEecCc----ceEEEEe--
Q 042768 108 LGQADNWLSFEGVSGVSIIGGALDAKGSSLWACKASGTNCPDGATTLSFT-NSNNIRINGLLSLNSQ----MFHIVIN-- 180 (397)
Q Consensus 108 ~~~~~~~i~~~~~~nv~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~-~~~nv~I~~v~i~~~~----~~~i~~~-- 180 (397)
|......+.+.-.+|++|.| +... -....|.+. +++||.|++++|++.. ..+|.+.
T Consensus 59 ~~~~~~~~~l~v~sn~TI~G-----~~a~------------i~g~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~ 121 (330)
T 2qy1_A 59 WKLPAKTVQIKNKSDVTIKG-----ANGS------------AANFGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGN 121 (330)
T ss_dssp TTSCCCEEEEESCCSEEEEE-----CTTC------------BBSSEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECB
T ss_pred cccccceeEEEcCCCeEEEC-----CCcE------------EeeeeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccc
Confidence 44333445555566777755 2221 123468888 8999999999999764 4578888
Q ss_pred ---ceecEEEEeEEEECCCC------CCCCCc-ceee-ceeeEEEEecEEecCCeeEEeCCC-------CeeEEEEeeEE
Q 042768 181 ---GCKDVHVEGVTVIAPGN------SPNTDG-IHVQ-LSMNVKITNCTIKTGDDCIPIGPG-------TKNLWIERVTC 242 (397)
Q Consensus 181 ---~~~~v~i~n~~i~~~~~------~~~~DG-i~~~-~s~nv~I~n~~i~~~dD~i~i~~~-------~~ni~i~n~~~ 242 (397)
.+++|.|++|++....+ ....|| +++. .+.+|+|++|.|.+.+-+.-+++. ..+|++.+|.|
T Consensus 122 ~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f 201 (330)
T 2qy1_A 122 SSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRF 201 (330)
T ss_dssp TTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEE
T ss_pred cCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEEEcceeccCCeEEEECCCCccccCCCceEEEECcEE
Confidence 59999999999974321 011255 4654 589999999999876666666652 15899999998
Q ss_pred eCC--CeEEEeeccccCCcCcEEEEEEEeeEEECC-cceEEEEeecCCCCceEEcEEEEeeeeccCcccEE
Q 042768 243 GPG--HGISIGSLAKDLVEEGVQNVTVFKTVFTGT-TNGFRIKSWARPSNGFVQGVRFIDAVMRNVQFPIV 310 (397)
Q Consensus 243 ~~~--~gi~igs~~~~~~~~~v~ni~i~n~~~~~~-~~gi~i~s~~~~~~g~v~nI~~~ni~~~~~~~~i~ 310 (397)
.+. +.-++. .+ .+.+.|+.+.+. .+++.... + ..|.+++..+++...|+.
T Consensus 202 ~~~~~R~Pr~r--------~G--~~hv~NN~~~n~~~~~i~~~~--~------~~i~~e~N~F~~~~~p~~ 254 (330)
T 2qy1_A 202 ENVESRVPLQR--------FG--LSHIYNNYFNNVTTSGINVRM--G------GIAKIESNYFENIKNPVT 254 (330)
T ss_dssp EEEEECTTEEE--------SS--EEEEESCEEEEECSCSEEEET--T------CEEEEESCEEEEEESSEE
T ss_pred cCCCCCCCcee--------cc--eEEEEeeEEEcccceEeccCC--C------cEEEEEccEEECCCCcee
Confidence 642 111221 11 488889988874 35655432 1 136677777766666654
No 55
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.51 E-value=2.4e-06 Score=81.19 Aligned_cols=97 Identities=19% Similarity=0.172 Sum_probs=66.7
Q ss_pred eEEEEeceecEEEEeEEEECCCC-CCCCCcceeeceeeEEEEecEEecC--------------CeeEEeCCCCeeEEEEe
Q 042768 175 FHIVINGCKDVHVEGVTVIAPGN-SPNTDGIHVQLSMNVKITNCTIKTG--------------DDCIPIGPGTKNLWIER 239 (397)
Q Consensus 175 ~~i~~~~~~~v~i~n~~i~~~~~-~~~~DGi~~~~s~nv~I~n~~i~~~--------------dD~i~i~~~~~ni~i~n 239 (397)
.++.+..++||.|+|++|+..+. ....|+|.+..++||+|++|.|..+ |..+.++.++.+|+|+|
T Consensus 103 ~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISn 182 (353)
T 1air_A 103 FGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSY 182 (353)
T ss_dssp SEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEES
T ss_pred ceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEe
Confidence 45666677777777777775321 2356888888888999999988642 44567776788999999
Q ss_pred eEEeCCC-eEEEeeccccCCcCcEEEEEEEeeEEECC
Q 042768 240 VTCGPGH-GISIGSLAKDLVEEGVQNVTVFKTVFTGT 275 (397)
Q Consensus 240 ~~~~~~~-gi~igs~~~~~~~~~v~ni~i~n~~~~~~ 275 (397)
|.|...+ +.-+|+... ... .+|+|.++.|.+.
T Consensus 183 n~f~~h~k~~LiG~sd~---~~g-~~vT~hhN~f~~~ 215 (353)
T 1air_A 183 NYIHGVKKVGLDGSSSS---DTG-RNITYHHNYYNDV 215 (353)
T ss_dssp CEEEEEEECCEESSSTT---CCC-CEEEEESCEEEEE
T ss_pred eEEcCCCceeEECCCcC---CCC-ceEEEEceEEcCC
Confidence 9987543 344555311 112 5888888888764
No 56
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.45 E-value=1.8e-06 Score=83.59 Aligned_cols=100 Identities=18% Similarity=0.259 Sum_probs=71.2
Q ss_pred EEEEeceecEEEEeEEEECCCC---------------CCCCCcceeeceeeEEEEecEEecC------------------
Q 042768 176 HIVINGCKDVHVEGVTVIAPGN---------------SPNTDGIHVQLSMNVKITNCTIKTG------------------ 222 (397)
Q Consensus 176 ~i~~~~~~~v~i~n~~i~~~~~---------------~~~~DGi~~~~s~nv~I~n~~i~~~------------------ 222 (397)
++.+..++||.|+|++|+...+ ....|+|.+..++||+|++|.|..+
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 5566667777777777775421 1356899999999999999999864
Q ss_pred CeeEEeCCCCeeEEEEeeEEeCCC-eEEEeeccccCCcCcEEEEEEEeeEEECC
Q 042768 223 DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDLVEEGVQNVTVFKTVFTGT 275 (397)
Q Consensus 223 dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~~~~~~~~~v~ni~i~n~~~~~~ 275 (397)
|..+.++.++.+|+|+||.|.+.+ +.-+|+.-.+....+--.|+|.+|.|.++
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~ 282 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNV 282 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEE
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCC
Confidence 566778777999999999998643 46666642111111234699999999764
No 57
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.43 E-value=0.00017 Score=65.17 Aligned_cols=230 Identities=14% Similarity=0.167 Sum_probs=140.5
Q ss_pred ceeEEeeccCccCCCccchHHHHHHHHHHHhhcCCCcEEEEcCcEEEecceeecCCCCCcceEEEEcc--EEEeeccccc
Q 042768 30 TTTYNVLSFGAKGNGVTDSTQAFAKAWAAACASTESATLYVPKGRYLLGSVAFNGDCKSSDITFRIDG--TLVAPADYRV 107 (397)
Q Consensus 30 ~~~~~v~dfGA~~dg~tddt~aiq~Ai~~ac~~~~g~~v~~p~G~Y~~~~l~l~~~~~s~~v~l~~~G--~l~~~~~~~~ 107 (397)
++++..++|||.+|-.+||+++|.+.|.. ...|++|.|+|....+.+. ...|+..| +|+.-...
T Consensus 62 arvls~k~fga~~~~~~d~~~~~~~sl~s------~~~v~i~~gvf~ss~i~~~------~c~l~g~g~g~~~~~~~~-- 127 (542)
T 2x3h_A 62 ARVLTSKPFGAAGDATTDDTEVIAASLNS------QKAVTISDGVFSSSGINSN------YCNLDGRGSGVLSHRSST-- 127 (542)
T ss_dssp HHBCBSSCTTCCCBSSSCCHHHHHHHHTS------SSCEECCSEEEEECCEEES------CCEEECTTTEEEEECSSS--
T ss_pred heeeecccccccCCcccCcHHHHHhhhcc------cccEecccccccccccccc------cccccccCCceeeeecCC--
Confidence 46788999999999999999999999853 3569999999998877773 78888874 77653222
Q ss_pred cCCCcceEEEE-----eeeceEEeccEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcceEEEEec-
Q 042768 108 LGQADNWLSFE-----GVSGVSIIGGALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQMFHIVING- 181 (397)
Q Consensus 108 ~~~~~~~i~~~-----~~~nv~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~~~i~~~~- 181 (397)
+..+.|. ..++++|.+ +... .....+-+.|.+..+|+++++.|.|....++.+..
T Consensus 128 ----gn~lvfn~p~~g~ls~~ti~~-----nk~~----------ds~qg~qvs~~gg~dvsv~~i~fsn~~g~gfsliay 188 (542)
T 2x3h_A 128 ----GNYLVFNNPRTGRLSNITVES-----NKAT----------DTTQGQQVSLAGGSDVTVSDVNFSNVKGTGFSLIAY 188 (542)
T ss_dssp ----SCCEEEESCEEEEEEEEEEEC-----CCSS----------TTCBCCSEEEESCEEEEEEEEEEEEECSBEEEEEEE
T ss_pred ----CCEEEEeCCCCcceeeEEEec-----ccCC----------ccccceEEEecCCCcceEeeeeeeecCCCceeEEEc
Confidence 2223332 245666655 3221 01123348899999999999999887666654431
Q ss_pred -----eecEEEEeEEEECCCCCCCC-Cc-ceeeceeeEEEEecEEec--CCeeEEeCCCCeeEEEEeeEEeCCCe-EEEe
Q 042768 182 -----CKDVHVEGVTVIAPGNSPNT-DG-IHVQLSMNVKITNCTIKT--GDDCIPIGPGTKNLWIERVTCGPGHG-ISIG 251 (397)
Q Consensus 182 -----~~~v~i~n~~i~~~~~~~~~-DG-i~~~~s~nv~I~n~~i~~--~dD~i~i~~~~~ni~i~n~~~~~~~g-i~ig 251 (397)
-+...|++++=.-...+.|. .| +-++++.|-+|++..-++ .-.++.++...+.-.+.|..=..+.- ..-|
T Consensus 189 p~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~~a~ynivsnvig~~cqhv~yng 268 (542)
T 2x3h_A 189 PNDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKGTASYNIVSNVIGADCQHVTYNG 268 (542)
T ss_dssp CSSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEETTCBSCEEEEEEEESCSEEEEEE
T ss_pred CCCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeecceeeehhhhhhhccceeEEECC
Confidence 24567777766544444332 23 334678899999988887 34678887754444455554444433 3345
Q ss_pred eccccCCcCcEEEEEEEeeEEECCcceEEEEeecCCCCceEEcEEEE
Q 042768 252 SLAKDLVEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFI 298 (397)
Q Consensus 252 s~~~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~~~~~~g~v~nI~~~ 298 (397)
.++.- ..+|=.|+.+--.+..+...+ ...+ .+..|++|.++
T Consensus 269 te~~~----apsnn~i~~vmannpkyaavv-~gkg-s~nlisdvlvd 309 (542)
T 2x3h_A 269 TEGPI----APSNNLIKGVMANNPKYAAVV-AGKG-STNLISDVLVD 309 (542)
T ss_dssp CSSSC----CCCSCEEEEEEEESCSSEEEE-CCSC-BSCEEEEEEEE
T ss_pred ccCCc----CCccchhhHhhcCCCceEEEE-EecC-ccceehheeee
Confidence 55321 122333343333444444322 1112 34456666654
No 58
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=98.29 E-value=1.7e-05 Score=75.12 Aligned_cols=42 Identities=14% Similarity=0.330 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHhhcCCCc---EEEEcCcEEEecceeecCCCCCcceEEEEcc
Q 042768 48 STQAFAKAWAAACASTESA---TLYVPKGRYLLGSVAFNGDCKSSDITFRIDG 97 (397)
Q Consensus 48 dt~aiq~Ai~~ac~~~~g~---~v~~p~G~Y~~~~l~l~~~~~s~~v~l~~~G 97 (397)
+-..||+||+++ +.+. +|+|++|+|.- .|.+. |. +++|.++|
T Consensus 17 ~f~TIq~Ai~aa---p~~~~~~~I~I~~G~Y~E-~V~I~---k~-~Itl~G~g 61 (342)
T 2nsp_A 17 TFKTIADAIASA---PAGSTPFVILIKNGVYNE-RLTIT---RN-NLHLKGES 61 (342)
T ss_dssp CBSSHHHHHHTS---CSSSSCEEEEECSEEEEC-CEEEC---ST-TEEEEESC
T ss_pred CcchHHHHHHhc---ccCCCcEEEEEeCCEEEE-EEEEe---cC-eEEEEecC
Confidence 344599999865 3444 89999999984 56664 24 78888775
No 59
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=98.27 E-value=9.9e-06 Score=77.02 Aligned_cols=96 Identities=23% Similarity=0.359 Sum_probs=67.0
Q ss_pred eceecEEEEeEEEECCCCC-----------CCCCcceeec-eeeEEEEecEEecC------------------CeeEEeC
Q 042768 180 NGCKDVHVEGVTVIAPGNS-----------PNTDGIHVQL-SMNVKITNCTIKTG------------------DDCIPIG 229 (397)
Q Consensus 180 ~~~~~v~i~n~~i~~~~~~-----------~~~DGi~~~~-s~nv~I~n~~i~~~------------------dD~i~i~ 229 (397)
..++||.|+|++|+...+. ...|+|.+.. ++||+|++|.|..+ |..+.++
T Consensus 111 ~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~ 190 (361)
T 1pe9_A 111 DGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIK 190 (361)
T ss_dssp GTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEEC
T ss_pred CCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeee
Confidence 4566666666666653210 3478999998 99999999999863 6678888
Q ss_pred CCCeeEEEEeeEEeCCC-eEEEeeccccC-CcCcEEEEEEEeeEEECC
Q 042768 230 PGTKNLWIERVTCGPGH-GISIGSLAKDL-VEEGVQNVTVFKTVFTGT 275 (397)
Q Consensus 230 ~~~~ni~i~n~~~~~~~-gi~igs~~~~~-~~~~v~ni~i~n~~~~~~ 275 (397)
.++.+|+|+||.|..-. ++-+|+.-.+. ...+--.|+|.++.|.+.
T Consensus 191 ~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 191 RGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp TTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEE
T ss_pred cCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCc
Confidence 88999999999997633 45666531100 011234799999999764
No 60
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.26 E-value=4e-06 Score=80.77 Aligned_cols=100 Identities=14% Similarity=0.224 Sum_probs=71.8
Q ss_pred eEEEEeceecEEEEeEEEECCCC---------------CCCCCcceeeceeeEEEEecEEecC-----------------
Q 042768 175 FHIVINGCKDVHVEGVTVIAPGN---------------SPNTDGIHVQLSMNVKITNCTIKTG----------------- 222 (397)
Q Consensus 175 ~~i~~~~~~~v~i~n~~i~~~~~---------------~~~~DGi~~~~s~nv~I~n~~i~~~----------------- 222 (397)
.++.+.. +||.|+|++|+...+ ....|+|.+..++||.|++|.|..+
T Consensus 143 ~gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~ 221 (399)
T 2o04_A 143 GNFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQH 221 (399)
T ss_dssp CEEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCC
T ss_pred CEEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeec
Confidence 3456666 788888888876422 1356899999999999999999864
Q ss_pred -CeeEEeCCCCeeEEEEeeEEeCCC-eEEEeeccccCCcCcEEEEEEEeeEEECC
Q 042768 223 -DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDLVEEGVQNVTVFKTVFTGT 275 (397)
Q Consensus 223 -dD~i~i~~~~~ni~i~n~~~~~~~-gi~igs~~~~~~~~~v~ni~i~n~~~~~~ 275 (397)
|..+.++.++.+|+|+||.|.+.+ +.-+|+.-.+....+-.+|+|.+|.|.++
T Consensus 222 ~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~ 276 (399)
T 2o04_A 222 HDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNI 276 (399)
T ss_dssp CCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEE
T ss_pred cccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCC
Confidence 666778878999999999998643 46666642111111234799999999764
No 61
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.24 E-value=2.3e-05 Score=74.54 Aligned_cols=136 Identities=15% Similarity=0.092 Sum_probs=91.9
Q ss_pred eEEEE-ccCCeEEEeeeEecC------cceEEEEeceecEEEEeEEEECCCCCCCCCcce---eeceeeEEEEecEEecC
Q 042768 153 TLSFT-NSNNIRINGLLSLNS------QMFHIVINGCKDVHVEGVTVIAPGNSPNTDGIH---VQLSMNVKITNCTIKTG 222 (397)
Q Consensus 153 ~i~~~-~~~nv~I~~v~i~~~------~~~~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~---~~~s~nv~I~n~~i~~~ 222 (397)
.|.+. +++||.|++++|++. ...+|.+..+++|.|++|++... .|+.. ...+++|+|++|.|...
T Consensus 125 gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~-----~d~~~~~g~~~s~~VTISnn~f~~~ 199 (359)
T 1idk_A 125 GLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARI-----GRQHYVLGTSADNRVSLTNNYIDGV 199 (359)
T ss_dssp CEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEE-----SSCSEEECCCTTCEEEEESCEEECB
T ss_pred eEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecC-----CCCcEEecccCcceEEEECcEecCC
Confidence 47887 899999999999973 22578899999999999999963 34433 45688999999999743
Q ss_pred C---------e--eEEeCCCCeeEEEEeeEEeCCC--eEEEeeccccCCcCcEEEEEEEeeEEECC-cceEEEEeecCCC
Q 042768 223 D---------D--CIPIGPGTKNLWIERVTCGPGH--GISIGSLAKDLVEEGVQNVTVFKTVFTGT-TNGFRIKSWARPS 288 (397)
Q Consensus 223 d---------D--~i~i~~~~~ni~i~n~~~~~~~--gi~igs~~~~~~~~~v~ni~i~n~~~~~~-~~gi~i~s~~~~~ 288 (397)
+ + ...+...+.++++.++.|.+.. .-++ ..-..+++.|+.+.+. .+++.... +
T Consensus 200 ~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~R~Pr~---------r~g~~~hv~NN~~~n~~~~~i~~~~--~-- 266 (359)
T 1idk_A 200 SDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKV---------QDNTLLHAVNNYWYDISGHAFEIGE--G-- 266 (359)
T ss_dssp CSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEE---------CTTCEEEEESCEEEEEEEEEEEECT--T--
T ss_pred cccccccCccccceEEEEecCCCeEEEceEeecCcccCccc---------cCCceEEEECCEEecccceEEeccC--C--
Confidence 2 1 2333333679999999997532 1111 0112588899988874 34444321 1
Q ss_pred CceEEcEEEEeeeeccCcccEE
Q 042768 289 NGFVQGVRFIDAVMRNVQFPIV 310 (397)
Q Consensus 289 ~g~v~nI~~~ni~~~~~~~~i~ 310 (397)
..+.+++..+++...|+.
T Consensus 267 ----~~i~~e~N~F~~~~~p~~ 284 (359)
T 1idk_A 267 ----GYVLAEGNVFQNVDTVLE 284 (359)
T ss_dssp ----CEEEEESCEEEEEEEEEE
T ss_pred ----cEEEEEccEEECCCCcee
Confidence 246777777776666654
No 62
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.14 E-value=5.2e-05 Score=72.20 Aligned_cols=111 Identities=10% Similarity=0.155 Sum_probs=87.5
Q ss_pred CCeEEEeeeEecC-----c------ceEEEEec-eecEEEEeEEEECCCCCCCCCcceeeceeeEEEEecEEecCCeeEE
Q 042768 160 NNIRINGLLSLNS-----Q------MFHIVING-CKDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKTGDDCIP 227 (397)
Q Consensus 160 ~nv~I~~v~i~~~-----~------~~~i~~~~-~~~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~ 227 (397)
++|+|++++|.+. . .-+|.+.. .+++.|+++.+.. +.-||.++.+++.+|++++|.....||.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~-----~~fGI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVY-----LEHALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEES-----CSEEEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEec-----ccEEEEEccCCCcEEECCEEEecCCcee
Confidence 5566666665554 3 34788886 8899999999998 5569999999999999999997778999
Q ss_pred eCCCCeeEEEEeeEEeCC-Ce--EEEeeccccCCcCcEEEEEEEeeEE-ECCcceEEEEee
Q 042768 228 IGPGTKNLWIERVTCGPG-HG--ISIGSLAKDLVEEGVQNVTVFKTVF-TGTTNGFRIKSW 284 (397)
Q Consensus 228 i~~~~~ni~i~n~~~~~~-~g--i~igs~~~~~~~~~v~ni~i~n~~~-~~~~~gi~i~s~ 284 (397)
++..++...|+|+.+..+ +| |.+ + ...+..|+++.+ ...++|+.+...
T Consensus 211 L~G~~~~~~I~~N~i~~~~dG~gIyl--~-------ns~~~~I~~N~i~~~~R~gIh~m~s 262 (410)
T 2inu_A 211 LTGAGQATIVSGNHMGAGPDGVTLLA--E-------NHEGLLVTGNNLFPRGRSLIEFTGC 262 (410)
T ss_dssp ECSCEESCEEESCEEECCTTSEEEEE--E-------SEESCEEESCEECSCSSEEEEEESC
T ss_pred eccccccceEecceeeecCCCCEEEE--E-------eCCCCEEECCCcccCcceEEEEEcc
Confidence 988788999999999864 35 555 2 456788899877 668899988654
No 63
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.14 E-value=7.1e-05 Score=71.20 Aligned_cols=135 Identities=13% Similarity=0.084 Sum_probs=84.2
Q ss_pred eEEEE-ccCCeEEEeeeEecCc------ceEEEEeceecEEEEeEEEECCCCCCCCCcce---eeceeeEEEEecEEecC
Q 042768 153 TLSFT-NSNNIRINGLLSLNSQ------MFHIVINGCKDVHVEGVTVIAPGNSPNTDGIH---VQLSMNVKITNCTIKTG 222 (397)
Q Consensus 153 ~i~~~-~~~nv~I~~v~i~~~~------~~~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~---~~~s~nv~I~n~~i~~~ 222 (397)
.|.+. +++||.|++++|++.. ..+|.+..++++.|++|++... .|+.. ...+++|+|++|.|...
T Consensus 125 gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~-----~d~~~~~~~~~s~~vTISnn~f~~~ 199 (359)
T 1qcx_A 125 GLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARI-----GRQHIVLGTSADNRVTISYSLIDGR 199 (359)
T ss_dssp CEEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEE-----SSCSEEECSSCCEEEEEESCEEECB
T ss_pred eEEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeecc-----CcCceeecccccccEEEECcEecCC
Confidence 48888 8999999999998743 2578899999999999999963 34432 34689999999999843
Q ss_pred Ce-----------eEEeCCCCeeEEEEeeEEeCCC--eEEEeeccccCCcCcEEEEEEEeeEEECC-cceEEEEeecCCC
Q 042768 223 DD-----------CIPIGPGTKNLWIERVTCGPGH--GISIGSLAKDLVEEGVQNVTVFKTVFTGT-TNGFRIKSWARPS 288 (397)
Q Consensus 223 dD-----------~i~i~~~~~ni~i~n~~~~~~~--gi~igs~~~~~~~~~v~ni~i~n~~~~~~-~~gi~i~s~~~~~ 288 (397)
.+ ...+...+.++++.++.+.+.. .-++. .-..+.+.|+.+.+. .+++....
T Consensus 200 ~~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~r---------~~~~~hv~NN~~~n~~~~a~~~~~----- 265 (359)
T 1qcx_A 200 SDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQ---------GNTLLHAVNNLFHNFDGHAFEIGT----- 265 (359)
T ss_dssp CSSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEEC---------SSEEEEEESCEEEEEEEEEEEECT-----
T ss_pred ccccccCcccccceeEEecCCCCeehcccEeccCcccCceec---------CCceEEEEccEEECccCeEEecCC-----
Confidence 21 2222222567777777775321 11110 012467777777653 23332211
Q ss_pred CceEEcEEEEeeeeccCcccE
Q 042768 289 NGFVQGVRFIDAVMRNVQFPI 309 (397)
Q Consensus 289 ~g~v~nI~~~ni~~~~~~~~i 309 (397)
-..|.+++..+++...|+
T Consensus 266 ---~~~i~~e~N~F~~~~~~~ 283 (359)
T 1qcx_A 266 ---GGYVLAEGNVFQDVNVVV 283 (359)
T ss_dssp ---TEEEEEESCEEEEEEEEE
T ss_pred ---CceEEEEeeEEECCCccc
Confidence 123566666666555554
No 64
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=98.02 E-value=9.8e-05 Score=70.17 Aligned_cols=111 Identities=20% Similarity=0.253 Sum_probs=75.5
Q ss_pred EEE---EccCCeEEEeeeEecCc---------------ceEEEEec-eecEEEEeEEEECCCCC------------CCCC
Q 042768 154 LSF---TNSNNIRINGLLSLNSQ---------------MFHIVING-CKDVHVEGVTVIAPGNS------------PNTD 202 (397)
Q Consensus 154 i~~---~~~~nv~I~~v~i~~~~---------------~~~i~~~~-~~~v~i~n~~i~~~~~~------------~~~D 202 (397)
|.+ .+++||.|++++|++.. ..+|.+.. +++|.|++|++....+. ...|
T Consensus 105 l~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~D 184 (361)
T 1pe9_A 105 LIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHD 184 (361)
T ss_dssp EEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCC
T ss_pred EEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeecc
Confidence 566 56788888888887531 23688888 99999999999864210 1246
Q ss_pred c-ceee-ceeeEEEEecEEecCCeeEEeCCCC---------eeEEEEeeEEeCC--CeEEEeeccccCCcCcEEEEEEEe
Q 042768 203 G-IHVQ-LSMNVKITNCTIKTGDDCIPIGPGT---------KNLWIERVTCGPG--HGISIGSLAKDLVEEGVQNVTVFK 269 (397)
Q Consensus 203 G-i~~~-~s~nv~I~n~~i~~~dD~i~i~~~~---------~ni~i~n~~~~~~--~gi~igs~~~~~~~~~v~ni~i~n 269 (397)
| +++. .+++|+|++|.|...+-+.-+++.. -+|++.+|.|.+. +.-++ .. -.+++.|
T Consensus 185 gllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~--------R~--G~~Hv~N 254 (361)
T 1pe9_A 185 GALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAPRV--------RY--GSIHSFN 254 (361)
T ss_dssp CSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEECSSEE--------SS--CEEEEES
T ss_pred ceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCccccCccc--------cc--ceEEEEc
Confidence 6 5565 6899999999998765566565521 2699999998642 11112 11 1388899
Q ss_pred eEEEC
Q 042768 270 TVFTG 274 (397)
Q Consensus 270 ~~~~~ 274 (397)
+.+.+
T Consensus 255 N~~~~ 259 (361)
T 1pe9_A 255 NVFKG 259 (361)
T ss_dssp CEEEE
T ss_pred ceEec
Confidence 98864
No 65
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.01 E-value=0.00051 Score=64.23 Aligned_cols=118 Identities=13% Similarity=0.145 Sum_probs=84.5
Q ss_pred EEEEccCCeEEEeeeEecCc---ceEEEEec-eecEEEEeEEEECCC----CCCCCCc-ceee-ceeeEEEEecEEecCC
Q 042768 154 LSFTNSNNIRINGLLSLNSQ---MFHIVING-CKDVHVEGVTVIAPG----NSPNTDG-IHVQ-LSMNVKITNCTIKTGD 223 (397)
Q Consensus 154 i~~~~~~nv~I~~v~i~~~~---~~~i~~~~-~~~v~i~n~~i~~~~----~~~~~DG-i~~~-~s~nv~I~n~~i~~~d 223 (397)
|.+.+++||.|++++|++.. ..+|.+.. +++|.|++|++.... +....|| +++. .+.+|+|++|.|...+
T Consensus 97 l~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~ 176 (326)
T 3vmv_A 97 IRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHW 176 (326)
T ss_dssp EEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEE
T ss_pred EEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCc
Confidence 77789999999999999764 45799996 999999999998431 1123465 4664 5899999999999866
Q ss_pred eeEEeCCC------CeeEEEEeeEEeCC--CeEEEeeccccCCcCcEEEEEEEeeEEECC-cceEEE
Q 042768 224 DCIPIGPG------TKNLWIERVTCGPG--HGISIGSLAKDLVEEGVQNVTVFKTVFTGT-TNGFRI 281 (397)
Q Consensus 224 D~i~i~~~------~~ni~i~n~~~~~~--~gi~igs~~~~~~~~~v~ni~i~n~~~~~~-~~gi~i 281 (397)
-+.-+++. -.+|++.+|.|.+. +.-++. ...+.+.|+.+.+. .+++..
T Consensus 177 k~~LiG~sd~~~~~~~~vT~~~N~f~~~~~R~Pr~r----------~G~~Hv~NN~~~n~~~~~~~~ 233 (326)
T 3vmv_A 177 KTMLVGHTDNASLAPDKITYHHNYFNNLNSRVPLIR----------YADVHMFNNYFKDINDTAINS 233 (326)
T ss_dssp ECEEECSSSCGGGCCEEEEEESCEEEEEEECTTEEE----------SCEEEEESCEEEEESSCSEEE
T ss_pred eEEEECCCCCCcccCccEEEEeeEecCCcCcCCccc----------CCcEEEEccEEECCCceEEee
Confidence 66666653 14799999998642 211221 11588899999874 356554
No 66
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.97 E-value=5.8e-05 Score=73.05 Aligned_cols=113 Identities=13% Similarity=0.155 Sum_probs=80.7
Q ss_pred eEEEEccCCeEEEeeeEecCc-------------------ceEEEEeceecEEEEeEEEECCCCC------------CCC
Q 042768 153 TLSFTNSNNIRINGLLSLNSQ-------------------MFHIVINGCKDVHVEGVTVIAPGNS------------PNT 201 (397)
Q Consensus 153 ~i~~~~~~nv~I~~v~i~~~~-------------------~~~i~~~~~~~v~i~n~~i~~~~~~------------~~~ 201 (397)
.|.+.+++||.|++++|.+.. ..+|.+..+++|.|++|++....+. ...
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 477889999999999997531 2468899999999999999964210 124
Q ss_pred Cc-ceee-ceeeEEEEecEEecCCeeEEeCCCC--------eeEEEEeeEEeCC--CeEEEeeccccCCcCcEEEEEEEe
Q 042768 202 DG-IHVQ-LSMNVKITNCTIKTGDDCIPIGPGT--------KNLWIERVTCGPG--HGISIGSLAKDLVEEGVQNVTVFK 269 (397)
Q Consensus 202 DG-i~~~-~s~nv~I~n~~i~~~dD~i~i~~~~--------~ni~i~n~~~~~~--~gi~igs~~~~~~~~~v~ni~i~n 269 (397)
|| +++. .+++|+|++|.|...+-+.-+++.. -+|++.+|.|.+. +.-++ .. -.+++.|
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~~R~Pr~--------R~--G~~Hv~N 298 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQRLPRV--------RF--GQVHIYN 298 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEEEECSSEE--------SS--CEEEEES
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCCccCCccc--------cc--ceEEEEc
Confidence 66 4555 6899999999999866666565521 2699999998642 22222 01 1488999
Q ss_pred eEEECC
Q 042768 270 TVFTGT 275 (397)
Q Consensus 270 ~~~~~~ 275 (397)
+.+.+.
T Consensus 299 N~~~n~ 304 (416)
T 1vbl_A 299 NYYEFS 304 (416)
T ss_dssp CEEEEC
T ss_pred ceEECC
Confidence 999853
No 67
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.86 E-value=0.00036 Score=66.20 Aligned_cols=113 Identities=18% Similarity=0.233 Sum_probs=79.6
Q ss_pred eEEEEccCCeEEEeeeEecCc---------------ceEEEEeceecEEEEeEEEECCCC---------CC---CCCc-c
Q 042768 153 TLSFTNSNNIRINGLLSLNSQ---------------MFHIVINGCKDVHVEGVTVIAPGN---------SP---NTDG-I 204 (397)
Q Consensus 153 ~i~~~~~~nv~I~~v~i~~~~---------------~~~i~~~~~~~v~i~n~~i~~~~~---------~~---~~DG-i 204 (397)
.|.+.+++||.|++++|++.. ..+|.+..+++|.|++|++....+ +. ..|| +
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~ 176 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGAL 176 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccce
Confidence 367778999999999998531 347888999999999999996421 00 1466 4
Q ss_pred eee-ceeeEEEEecEEecCCeeEEeCCCC---------eeEEEEeeEEeCC--CeEEEeeccccCCcCcEEEEEEEeeEE
Q 042768 205 HVQ-LSMNVKITNCTIKTGDDCIPIGPGT---------KNLWIERVTCGPG--HGISIGSLAKDLVEEGVQNVTVFKTVF 272 (397)
Q Consensus 205 ~~~-~s~nv~I~n~~i~~~dD~i~i~~~~---------~ni~i~n~~~~~~--~gi~igs~~~~~~~~~v~ni~i~n~~~ 272 (397)
++. .+++|+|++|.|...+-+.-+++.. .+|++.+|.|.+. +.-++. .-.+++.|+.+
T Consensus 177 Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~PrvR----------~G~~Hv~NN~~ 246 (355)
T 1pcl_A 177 DIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRVR----------FGSIHAYNNVY 246 (355)
T ss_pred eeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCCcccCCcee----------cceEEEEcceE
Confidence 565 6899999999998866666565521 2699999999653 222221 01388899998
Q ss_pred ECC
Q 042768 273 TGT 275 (397)
Q Consensus 273 ~~~ 275 (397)
.+.
T Consensus 247 ~~~ 249 (355)
T 1pcl_A 247 LGD 249 (355)
T ss_pred Ecc
Confidence 754
No 68
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.64 E-value=0.00039 Score=66.94 Aligned_cols=112 Identities=13% Similarity=0.180 Sum_probs=79.5
Q ss_pred eEEEEccCCeEEEeeeEecCc-------------------ceEEEEeceecEEEEeEEEECCCCC------------CCC
Q 042768 153 TLSFTNSNNIRINGLLSLNSQ-------------------MFHIVINGCKDVHVEGVTVIAPGNS------------PNT 201 (397)
Q Consensus 153 ~i~~~~~~nv~I~~v~i~~~~-------------------~~~i~~~~~~~v~i~n~~i~~~~~~------------~~~ 201 (397)
.|.+.. +||.|++++|++.. ..+|.+..+++|.|++|++....+. ...
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 377777 99999999997531 2468889999999999999964210 124
Q ss_pred Cc-ceee-ceeeEEEEecEEecCCeeEEeCCC--------CeeEEEEeeEEeCC--CeEEEeeccccCCcCcEEEEEEEe
Q 042768 202 DG-IHVQ-LSMNVKITNCTIKTGDDCIPIGPG--------TKNLWIERVTCGPG--HGISIGSLAKDLVEEGVQNVTVFK 269 (397)
Q Consensus 202 DG-i~~~-~s~nv~I~n~~i~~~dD~i~i~~~--------~~ni~i~n~~~~~~--~gi~igs~~~~~~~~~v~ni~i~n 269 (397)
|| +++. .+.+|+|++|.|...+-+.-+++. -.+|++.+|.|.+. +.-++. . -.+++-|
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~~R~Pr~R--------~--G~~Hv~N 292 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAPRVR--------F--GQVHVYN 292 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEEEECTTEES--------S--CEEEEES
T ss_pred ccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCCcccCCCcc--------c--ceEEEEc
Confidence 66 4565 689999999999976666666652 13899999998642 222221 1 1488999
Q ss_pred eEEECC
Q 042768 270 TVFTGT 275 (397)
Q Consensus 270 ~~~~~~ 275 (397)
+.+.+.
T Consensus 293 N~~~n~ 298 (399)
T 2o04_A 293 NYYEGS 298 (399)
T ss_dssp CEEECC
T ss_pred ceEECC
Confidence 999765
No 69
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=97.47 E-value=0.0054 Score=58.86 Aligned_cols=47 Identities=21% Similarity=0.187 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHHhh--cCCCcEEEEcCcEEEecceeecCCCCCcceEEEEcc
Q 042768 48 STQAFAKAWAAACA--STESATLYVPKGRYLLGSVAFNGDCKSSDITFRIDG 97 (397)
Q Consensus 48 dt~aiq~Ai~~ac~--~~~g~~v~~p~G~Y~~~~l~l~~~~~s~~v~l~~~G 97 (397)
+-..||+||+++-. .....+|+|.+|+|.- .|.++.. |. +++|+++|
T Consensus 88 ~f~TIqeAVdaap~~~~~~r~vI~Ik~GvY~E-~V~Ip~~-K~-~ItL~G~G 136 (422)
T 3grh_A 88 THTTIQAAVDAAIIKRTNKRQYIAVMPGEYQG-TVYVPAA-PG-GITLYGTG 136 (422)
T ss_dssp CBSSHHHHHHHHHTTCCSSCEEEEECSEEEES-CEEECCC-SS-CEEEEECS
T ss_pred CcCCHHHHHHhchhcCCCccEEEEEeCCeEee-eEEecCC-CC-cEEEEecc
Confidence 44569999987621 1234689999999995 4666421 35 89998886
No 70
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.41 E-value=0.00068 Score=65.54 Aligned_cols=110 Identities=8% Similarity=0.011 Sum_probs=82.9
Q ss_pred eEEEEccCCeEEEeeeEecCcceEEEEeceecEEEEeEEEECCCCCCCCCcceeece-eeEEEEecEEecCC--------
Q 042768 153 TLSFTNSNNIRINGLLSLNSQMFHIVINGCKDVHVEGVTVIAPGNSPNTDGIHVQLS-MNVKITNCTIKTGD-------- 223 (397)
Q Consensus 153 ~i~~~~~~nv~I~~v~i~~~~~~~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~~s-~nv~I~n~~i~~~d-------- 223 (397)
.|.+ ..++++|++++|.+....+|.+.. .+.+|++|+|+.. ...||.+... .+.+|+||.+....
T Consensus 109 ~i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n----~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~ 182 (400)
T 1ru4_A 109 GFYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHN----RNTGLEINNGGSYNTVINSDAYRNYDPKKNGSM 182 (400)
T ss_dssp SEEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESC----SSCSEEECTTCCSCEEESCEEECCCCTTTTTSS
T ss_pred EEEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECC----CceeEEEEcccCCeEEEceEEEcccCccccCcc
Confidence 3555 789999999999888777888876 7889999999973 3349999864 48899999997632
Q ss_pred -eeEEeCCC-CeeEEEEeeEEeCC--CeEEEeeccccCCcCcEEEEEEEeeEEECCc
Q 042768 224 -DCIPIGPG-TKNLWIERVTCGPG--HGISIGSLAKDLVEEGVQNVTVFKTVFTGTT 276 (397)
Q Consensus 224 -D~i~i~~~-~~ni~i~n~~~~~~--~gi~igs~~~~~~~~~v~ni~i~n~~~~~~~ 276 (397)
|+++++.. .+..+|++|+++.. .|+.+- .....++|+||...+..
T Consensus 183 ~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~--------~~~~~v~i~nn~a~~Ng 231 (400)
T 1ru4_A 183 ADGFGPKQKQGPGNRFVGCRAWENSDDGFDLF--------DSPQKVVIENSWAFRNG 231 (400)
T ss_dssp CCSEEECTTCCSCCEEESCEEESCSSCSEECT--------TCCSCCEEESCEEESTT
T ss_pred cceEEEEecccCCeEEECCEEeecCCCcEEEE--------ecCCCEEEEeEEEECCc
Confidence 68887642 37888999998753 477652 12235799999987653
No 71
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=96.99 E-value=0.0023 Score=61.21 Aligned_cols=71 Identities=17% Similarity=0.148 Sum_probs=52.3
Q ss_pred eEEEEccCCeEEE-eeeEecCcceEEEEeceecEEEEeEEEECCCCCCCCCcceee------------ceeeEEEEecEE
Q 042768 153 TLSFTNSNNIRIN-GLLSLNSQMFHIVINGCKDVHVEGVTVIAPGNSPNTDGIHVQ------------LSMNVKITNCTI 219 (397)
Q Consensus 153 ~i~~~~~~nv~I~-~v~i~~~~~~~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~------------~s~nv~I~n~~i 219 (397)
.+++..|++++++ ++.+. .+|+||.|.||+|...++ .|.+. .|++++
T Consensus 197 TIhPi~Cqnvt~r~gL~f~---------eSCrNV~IsnC~FsVGDd-----ciaiksGk~~~~~~~~~~se~~~------ 256 (514)
T 2vbk_A 197 HSKFIACQAGTCRVGLHFL---------GQCVSVSVSSCHFSRGNY-----SADESFGIRIQPQTYAWSSEAVR------ 256 (514)
T ss_dssp EEEEESCEEEEEEEEEEEE---------SCCEEEEEESCEEECTTS-----CCTTCEEEEEECBCCTTTSSCBC------
T ss_pred EEeEeccCceecccCcccc---------CCCCeEEEeccEEecCcc-----eeeeecCceecccccCCcchhcc------
Confidence 4889999999987 66663 379999999999998654 34443 245554
Q ss_pred ecCCeeEEeCCC-----Cee-EEEEeeEEeCCC
Q 042768 220 KTGDDCIPIGPG-----TKN-LWIERVTCGPGH 246 (397)
Q Consensus 220 ~~~dD~i~i~~~-----~~n-i~i~n~~~~~~~ 246 (397)
+.+|.++|. .+| ++|++|.|.+.+
T Consensus 257 ---hgav~igSE~m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 257 ---SEAIILDSETMCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp ---CEEEEEESSEEEESCSEEEEESCCEEEEEE
T ss_pred ---cccEEECchhhcccccccEEEEeeeccCCc
Confidence 567777764 578 999999887543
No 72
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=96.45 E-value=0.13 Score=43.36 Aligned_cols=106 Identities=16% Similarity=0.198 Sum_probs=59.7
Q ss_pred cEEEEeEEEECCCCCCCCCcceeeceeeEEEEecEEec-CCeeEEeCCCCeeEEEEeeEEeCCCe--EEEeeccccCCcC
Q 042768 184 DVHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKT-GDDCIPIGPGTKNLWIERVTCGPGHG--ISIGSLAKDLVEE 260 (397)
Q Consensus 184 ~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~i~~~~~ni~i~n~~~~~~~g--i~igs~~~~~~~~ 260 (397)
..+++|+.|-. ...||||..+ +-+|+|+.+.. +.|++.++. +..++|.+.-..++.. |..-
T Consensus 53 GaTLkNvIIG~----~~~dGIHC~G--~ctl~NVwwedVcEDA~T~kg-~g~~~I~GGgA~~A~DKV~Q~N--------- 116 (196)
T 3t9g_A 53 GANLKNVIIGA----PGCDGIHCYG--DNVVENVVWEDVGEDALTVKS-EGVVEVIGGSAKEAADKVFQLN--------- 116 (196)
T ss_dssp TCEEEEEEECS----CCTTCEEECS--SEEEEEEEESSCCSCSEEECS-SEEEEEESCEEEEEEEEEEEEC---------
T ss_pred CCEEEEEEECC----CCcCcEEEcC--CEeEEEEEeeeeeceeeEEcC-CCeEEEECCCccCCCceEEEEC---------
Confidence 45566666654 3667888764 45677777766 778888875 4566666665554432 2221
Q ss_pred cEEEEEEEeeEEECCcceEEEEeecCCCCceEEcEEEEeeeeccCcccE
Q 042768 261 GVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFIDAVMRNVQFPI 309 (397)
Q Consensus 261 ~v~ni~i~n~~~~~~~~gi~i~s~~~~~~g~v~nI~~~ni~~~~~~~~i 309 (397)
+--.+.|+|.++.+ .|--..+... -..-++|.++|+++.+....+
T Consensus 117 g~Gtv~I~nF~~~~--~GKl~RSCGn--c~~~r~v~i~~v~~~n~k~~l 161 (196)
T 3t9g_A 117 APCTFKVKNFTATN--IGKLVRQNGN--TTFKVVIYLEDVTLNNVKSCV 161 (196)
T ss_dssp SSEEEEEEEEEEEE--EEEEEEECTT--CCSCEEEEEEEEEEEEEEEEE
T ss_pred CCceEEEeeEEEcc--CCEEEEcCCC--CCceeEEEEeCeEEeCCEEEE
Confidence 11245566655554 2433444322 123367777777777665444
No 73
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=96.34 E-value=0.021 Score=53.21 Aligned_cols=113 Identities=9% Similarity=0.067 Sum_probs=79.2
Q ss_pred ceecEEEEeEEEECCCCC--CCCCcceeeceeeEEEEecEEecCCeeEEeCCCCeeEEEEeeEEeCCCeEEEeeccccCC
Q 042768 181 GCKDVHVEGVTVIAPGNS--PNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLV 258 (397)
Q Consensus 181 ~~~~v~i~n~~i~~~~~~--~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~~~~~~ 258 (397)
.+++++++|++|++.... ..+-++.+. ++++.++||.|....|.+.... .+ ..++||++.+.-.+-+|..
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~-~r-~~~~~c~I~G~vDFIfG~~----- 163 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRVG-SDLSAFYRCDILAYQDSLYVHS-NR-QFFINCFIAGTVDFIFGNA----- 163 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEEC-CTTEEEEEEEEECSTTCEEECS-SE-EEEESCEEEESSSCEEESC-----
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEec-CCcEEEEEeEECccceeeeecC-cc-EEEEecEEEeeeeEEecCC-----
Confidence 578999999999986432 244566664 5889999999999888998876 33 4999999997767767653
Q ss_pred cCcEEEEEEEeeEEECCc----ceEEEEeecCCCCceEEcEEEEeeeeccCc
Q 042768 259 EEGVQNVTVFKTVFTGTT----NGFRIKSWARPSNGFVQGVRFIDAVMRNVQ 306 (397)
Q Consensus 259 ~~~v~ni~i~n~~~~~~~----~gi~i~s~~~~~~g~v~nI~~~ni~~~~~~ 306 (397)
...|+||++.... ..-.|..........-..+.|.|+++....
T Consensus 164 -----~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 210 (319)
T 1gq8_A 164 -----AVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATS 210 (319)
T ss_dssp -----EEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECT
T ss_pred -----cEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCC
Confidence 4889999998642 112343332112233445789999987543
No 74
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=96.30 E-value=0.025 Score=56.10 Aligned_cols=142 Identities=6% Similarity=-0.036 Sum_probs=97.7
Q ss_pred ccCCeEEEeeeEecC-cceEEEEeceecEEEEeEEEECCCCCCCCCcceeeceeeEEEEecEEecC-----CeeEEeCCC
Q 042768 158 NSNNIRINGLLSLNS-QMFHIVINGCKDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKTG-----DDCIPIGPG 231 (397)
Q Consensus 158 ~~~nv~I~~v~i~~~-~~~~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~-----dD~i~i~~~ 231 (397)
...+.+|++-.+.+. ....+....+.+.+|++.++... ..||.+..+++.+|+++.|... ..||.+..
T Consensus 226 ~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~-----~ggi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~- 299 (506)
T 1dbg_A 226 DIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNC-----QGTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWG- 299 (506)
T ss_dssp CBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEESC-----SSEEEEEECSSCEEESCEEEECSSSSCBCCEEECS-
T ss_pred ccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEcc-----cCcEEEeecCccEEECCEEECCcCccCceEEEEEC-
Confidence 457888888888764 23456666666789999999973 3479888888889999999774 36788854
Q ss_pred CeeEEEEeeEEeCCC--------eEEEeeccccCCcCcEEEEEEEeeEEECCcc-eEEEE----------eecCCCCceE
Q 042768 232 TKNLWIERVTCGPGH--------GISIGSLAKDLVEEGVQNVTVFKTVFTGTTN-GFRIK----------SWARPSNGFV 292 (397)
Q Consensus 232 ~~ni~i~n~~~~~~~--------gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~-gi~i~----------s~~~~~~g~v 292 (397)
. +.+|+|++|.+.. |+.+...........+++++|++++|.++.. ||.+. ...+.....-
T Consensus 300 ~-~~~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~~~~~~~~~~~~~g~~~~~~~p 378 (506)
T 1dbg_A 300 S-RHVIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVNGYAIHFNPLDERRKEYCAANRLKFETP 378 (506)
T ss_dssp B-SCEEESCEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEESCSSEEEESSTTHHHHHHHHHHTTCCCBCC
T ss_pred C-CCEEECCEEECCcCccccccccEEEecCCCccccccccCcEEECCEEECCccccEEEcccccccccccccccccccCC
Confidence 3 4499999998643 5665211100012347899999999999987 99987 2111112445
Q ss_pred EcEEEEeeeeccCc
Q 042768 293 QGVRFIDAVMRNVQ 306 (397)
Q Consensus 293 ~nI~~~ni~~~~~~ 306 (397)
.|++|.|.-+.+..
T Consensus 379 ~~~~~~nN~i~~~~ 392 (506)
T 1dbg_A 379 HQLMLKGNLFFKDK 392 (506)
T ss_dssp CSEEEESCEEECCS
T ss_pred CcEEEEccEEEcCC
Confidence 67888887776554
No 75
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=96.21 E-value=0.022 Score=53.09 Aligned_cols=113 Identities=9% Similarity=0.068 Sum_probs=79.3
Q ss_pred ceecEEEEeEEEECCCCC--CCCCcceeeceeeEEEEecEEecCCeeEEeCCCCeeEEEEeeEEeCCCeEEEeeccccCC
Q 042768 181 GCKDVHVEGVTVIAPGNS--PNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLV 258 (397)
Q Consensus 181 ~~~~v~i~n~~i~~~~~~--~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~~~~~~ 258 (397)
.+++++++|++|++.... ..+-++.+. ++++.++||.|....|.+.... .+ -.++||++.+.-.+-+|..
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~-~r-~~~~~c~I~G~vDFIfG~~----- 159 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRVG-ADMSVINRCRIDAYQDTLYAHS-QR-QFYRDSYVTGTVDFIFGNA----- 159 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEEC-CTTEEEESCEEECSTTCEEECS-SE-EEEESCEEEESSSCEEECC-----
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEEe-CCcEEEEEeEeCccccceeecC-cc-EEEEeeEEEeceeEEcCCc-----
Confidence 678999999999986432 244566764 5889999999999888988876 33 4999999997767777653
Q ss_pred cCcEEEEEEEeeEEECCcc----eEEEEeecCCCCceEEcEEEEeeeeccCc
Q 042768 259 EEGVQNVTVFKTVFTGTTN----GFRIKSWARPSNGFVQGVRFIDAVMRNVQ 306 (397)
Q Consensus 259 ~~~v~ni~i~n~~~~~~~~----gi~i~s~~~~~~g~v~nI~~~ni~~~~~~ 306 (397)
...|+||++..... .-.|..........-....|.|+++....
T Consensus 160 -----~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 206 (317)
T 1xg2_A 160 -----AVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASS 206 (317)
T ss_dssp -----EEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECT
T ss_pred -----eEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCC
Confidence 48899999986321 12333322112233445779999987543
No 76
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=96.00 E-value=0.42 Score=40.48 Aligned_cols=77 Identities=12% Similarity=0.058 Sum_probs=40.9
Q ss_pred CCeEEEeeeEecCcceEEEEeceecEEEEeEEEECCCCCCCCCcceeeceeeEEEEecEEecCCeeEEeCCCCeeEEEEe
Q 042768 160 NNIRINGLLSLNSQMFHIVINGCKDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIER 239 (397)
Q Consensus 160 ~nv~I~~v~i~~~~~~~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n 239 (397)
+..+|+++.|-.+...+||... +.+|+|++.+.. ..|.+.+.++..++|.+.-.++.+|-|--..+...+.|+|
T Consensus 48 ~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwedV----cEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~n 121 (197)
T 1ee6_A 48 AGASLKNVVIGAPAADGVHCYG--DCTITNVIWEDV----GEDALTLKSSGTVNISGGAAYKAYDKVFQINAAGTINIRN 121 (197)
T ss_dssp TTEEEEEEEECSSCTTCEEEES--CEEEEEEEESSC----CSCSEEEEESEEEEEESCEEEEEEEEEEEECSSEEEEEES
T ss_pred CCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeeec----cccccEEcCCCeEEEECCCccCCCccEEEecCCceEEEee
Confidence 4566666666555555565543 456666666552 3355555544455555555555444443333344555555
Q ss_pred eEE
Q 042768 240 VTC 242 (397)
Q Consensus 240 ~~~ 242 (397)
.+.
T Consensus 122 F~~ 124 (197)
T 1ee6_A 122 FRA 124 (197)
T ss_dssp CEE
T ss_pred EEE
Confidence 443
No 77
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=95.82 E-value=0.6 Score=39.40 Aligned_cols=132 Identities=13% Similarity=0.053 Sum_probs=91.3
Q ss_pred cCCeEEEeeeEecCcceEEEEeceecEEEEeEEEECCCCCCCCCcceeeceeeEEEEecEEecCCeeEEeCCCCeeEEEE
Q 042768 159 SNNIRINGLLSLNSQMFHIVINGCKDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIE 238 (397)
Q Consensus 159 ~~nv~I~~v~i~~~~~~~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~ 238 (397)
-+..+|+++.|-.+...+||... +.+|+|++.+.. ..|.+.+.++..++|.+.-.++.+|-|-=..+...+.|.
T Consensus 51 e~GaTLkNvIIG~~~~dGIHC~G--~ctl~NVwwedV----cEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~ 124 (196)
T 3t9g_A 51 EKGANLKNVIIGAPGCDGIHCYG--DNVVENVVWEDV----GEDALTVKSEGVVEVIGGSAKEAADKVFQLNAPCTFKVK 124 (196)
T ss_dssp CTTCEEEEEEECSCCTTCEEECS--SEEEEEEEESSC----CSCSEEECSSEEEEEESCEEEEEEEEEEEECSSEEEEEE
T ss_pred cCCCEEEEEEECCCCcCcEEEcC--CEeEEEEEeeee----eceeeEEcCCCeEEEECCCccCCCceEEEECCCceEEEe
Confidence 36789999999877788898864 789999999883 568888887788999999999877776555567788898
Q ss_pred eeEEeCCCeEEEeeccccCCcCcEEEEEEEeeEEECCcceEEEEeecCCCCceEEcEEEEeeeeccCc
Q 042768 239 RVTCGPGHGISIGSLAKDLVEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFIDAVMRNVQ 306 (397)
Q Consensus 239 n~~~~~~~gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~~~~~~g~v~nI~~~ni~~~~~~ 306 (397)
|.+..+ .|--+-|-|. ...-++|.++|+++.+....+ +++... -..+.+.|+++.++.
T Consensus 125 nF~~~~-~GKl~RSCGn---c~~~r~v~i~~v~~~n~k~~l-~rtdS~-----~~~~~~~n~~~~~~~ 182 (196)
T 3t9g_A 125 NFTATN-IGKLVRQNGN---TTFKVVIYLEDVTLNNVKSCV-AKSDSP-----VSELWYHNLNVNNCK 182 (196)
T ss_dssp EEEEEE-EEEEEEECTT---CCSCEEEEEEEEEEEEEEEEE-EECCCT-----TCEEEEEEEEEEEEE
T ss_pred eEEEcc-CCEEEEcCCC---CCceeEEEEeCeEEeCCEEEE-EEcCCC-----CCEEEEecceecCCC
Confidence 887753 3322222221 123479999999999874443 233211 124556666665544
No 78
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=95.64 E-value=0.56 Score=43.07 Aligned_cols=68 Identities=13% Similarity=0.130 Sum_probs=31.3
Q ss_pred ceEEeccEEecCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeeEecCcceEEEEeceecEEEEeEEEEC
Q 042768 122 GVSIIGGALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQMFHIVINGCKDVHVEGVTVIA 194 (397)
Q Consensus 122 nv~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~~~~~~~i~~~~~~~v~i~n~~i~~ 194 (397)
.-+|.|.++||.+..| .....++. .....++.+.+ ..+++++.|-.....+||.... +.+|+|+..+.
T Consensus 124 ~~~i~g~t~Dgg~k~~-~~~c~~q~-E~q~~vF~le~--GatlkNvIiG~~~~dGIHC~~G-~CtleNVwwed 191 (344)
T 3b4n_A 124 GATFENRTVDCGGVTI-GTSCPNDS-DKQKPLIILKN--ATVKNLRISASGGADGIHCDSG-NCTIENVIWED 191 (344)
T ss_dssp TEEEESSEEECTTCEE-CCCCCTTC-SCCCCSEEEES--CEEEEEEECTTCCTTCEEEEES-EEEEEEEEESS
T ss_pred ceeEecceEcCCCcEE-CCCCCCcc-ccCccEEEEcc--CcEEEEEEecCCCccceEEccC-CeeEEEEeehh
Confidence 4466677888877664 21111111 11233444443 3455555554444444444311 34455554444
No 79
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=95.44 E-value=0.2 Score=47.50 Aligned_cols=114 Identities=9% Similarity=0.009 Sum_probs=80.4
Q ss_pred eceecEEEEeEEEECCCC----------------CCCCCcceee-ceeeEEEEecEEecCCeeEEeCCCCeeEEEEeeEE
Q 042768 180 NGCKDVHVEGVTVIAPGN----------------SPNTDGIHVQ-LSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTC 242 (397)
Q Consensus 180 ~~~~~v~i~n~~i~~~~~----------------~~~~DGi~~~-~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~ 242 (397)
..+++++++|++|+|... ...+-++.+. .+.+..++||.|....|.+.... .....+++|++
T Consensus 119 V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~-~gr~yf~~c~I 197 (364)
T 3uw0_A 119 VNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKT-GSRSYFSDCEI 197 (364)
T ss_dssp ECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECT-TCEEEEESCEE
T ss_pred EECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCC-CCCEEEEcCEE
Confidence 457899999999998742 1233355554 46899999999999889988873 46899999999
Q ss_pred eCCCeEEEeeccccCCcCcEEEEEEEeeEEECCc------ceEEEEeecCCCCceEEcEEEEeeeeccC
Q 042768 243 GPGHGISIGSLAKDLVEEGVQNVTVFKTVFTGTT------NGFRIKSWARPSNGFVQGVRFIDAVMRNV 305 (397)
Q Consensus 243 ~~~~gi~igs~~~~~~~~~v~ni~i~n~~~~~~~------~gi~i~s~~~~~~g~v~nI~~~ni~~~~~ 305 (397)
++.-.+-+|.. ...|+||++.... .+-.|..... ....-..+.|.|+++...
T Consensus 198 ~GtvDFIFG~a----------~a~f~~c~i~~~~~~~~~~~~g~ITA~~~-~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 198 SGHVDFIFGSG----------ITVFDNCNIVARDRSDIEPPYGYITAPST-LTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp EESEEEEEESS----------EEEEESCEEEECCCSSCSSCCEEEEEECC-CTTCSCCEEEESCEEEEC
T ss_pred EcCCCEECCcc----------eEEEEeeEEEEeccCcccCCccEEEeCCc-CCCCCcEEEEEeeEEecC
Confidence 98878888763 5889999997531 1223433311 222223478999999753
No 80
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=95.34 E-value=0.35 Score=40.91 Aligned_cols=110 Identities=15% Similarity=0.195 Sum_probs=70.5
Q ss_pred ecEEEEeEEEECCCCCCCCCcceeeceeeEEEEecEEec-CCeeEEeCCCCeeEEEEeeEEeCCCe--EEEeeccccCCc
Q 042768 183 KDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKT-GDDCIPIGPGTKNLWIERVTCGPGHG--ISIGSLAKDLVE 259 (397)
Q Consensus 183 ~~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~i~~~~~ni~i~n~~~~~~~g--i~igs~~~~~~~ 259 (397)
...+++|+.|-. +..||||..+ +-+|+|+.+.. +.|++.++. ...++|.+.-..++.. +..-
T Consensus 48 ~GaTLkNvIIG~----~~~dGIHC~G--~CtleNVwwedVcEDA~T~k~-~g~~~I~GGgA~~A~DKV~Q~N-------- 112 (197)
T 1ee6_A 48 AGASLKNVVIGA----PAADGVHCYG--DCTITNVIWEDVGEDALTLKS-SGTVNISGGAAYKAYDKVFQIN-------- 112 (197)
T ss_dssp TTEEEEEEEECS----SCTTCEEEES--CEEEEEEEESSCCSCSEEEEE-SEEEEEESCEEEEEEEEEEEEC--------
T ss_pred CCCEEEEEEEcC----CCcccEEEcC--ceeEEEEEeeeccccccEEcC-CCeEEEECCCccCCCccEEEec--------
Confidence 478999999976 5789999976 47899999887 899999985 5566666665554433 2221
Q ss_pred CcEEEEEEEeeEEECCcceEEEEeecCCCCceEEcEEEEeeeeccCcccEEEE
Q 042768 260 EGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFIDAVMRNVQFPIVID 312 (397)
Q Consensus 260 ~~v~ni~i~n~~~~~~~~gi~i~s~~~~~~g~v~nI~~~ni~~~~~~~~i~i~ 312 (397)
+--.+.|+|-+..+ .|=-..+... - ..-++|.++|+++.+....|...
T Consensus 113 -g~Gtv~I~nF~~~~--~GKl~RScGn-c-~~~r~v~i~~v~~~~~k~~i~~~ 160 (197)
T 1ee6_A 113 -AAGTINIRNFRADD--IGKLVRQNGG-T-TYKVVMNVENCNISRVKDAILRT 160 (197)
T ss_dssp -SSEEEEEESCEEEE--EEEEEEECTT-C-CSCEEEEEESCEEEEEEEEEEEC
T ss_pred -CCceEEEeeEEEcc--CCEEEEcCCC-C-ccceEEEEeceEEECceEEEEEe
Confidence 12246666655543 3434444322 1 12367788888777765554433
No 81
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=95.26 E-value=0.15 Score=48.02 Aligned_cols=85 Identities=2% Similarity=-0.082 Sum_probs=56.5
Q ss_pred ceeeEEEEecEEecCCeeEEeCCCCeeEEEEeeEEeCCCeEEEeeccccCCcCcEEEEEEEeeEEECCcc---e-----E
Q 042768 208 LSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLVEEGVQNVTVFKTVFTGTTN---G-----F 279 (397)
Q Consensus 208 ~s~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~gi~igs~~~~~~~~~v~ni~i~n~~~~~~~~---g-----i 279 (397)
.++++.++||.|....|.+.... ....++||++++.-.+-+|.. ...|+||++..... + -
T Consensus 138 ~~d~~~f~~c~f~G~QDTLy~~~--gr~~~~~c~I~G~vDFIFG~a----------~a~f~~c~i~~~~~~~~~~~~~~g 205 (342)
T 2nsp_A 138 SGDRAYFKDVSLVGYQATLYVSG--GRSFFSDCRISGTVDFIFGDG----------TALFNNCDLVSRYRADVKSGNVSG 205 (342)
T ss_dssp TCBSEEEEEEEEECSTTCEEECS--SEEEEESCEEEESEEEEEESS----------EEEEESCEEEECCCTTSCTTSCCE
T ss_pred ccCcEEEEeeEEecccceEEECC--CCEEEEcCEEEeceEEEeCCc----------eEEEecCEEEEecCcccccccCce
Confidence 45788999999998778887775 468889999987777777663 48889998875321 0 2
Q ss_pred EEEeecCCCCceEEcEEEEeeeeccC
Q 042768 280 RIKSWARPSNGFVQGVRFIDAVMRNV 305 (397)
Q Consensus 280 ~i~s~~~~~~g~v~nI~~~ni~~~~~ 305 (397)
.|... ......-..+.|.|+++...
T Consensus 206 ~ItA~-~~~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 206 YLTAP-STNINQKYGLVITNSRVIRE 230 (342)
T ss_dssp EEEEE-CCBTTCSCCEEEESCEEEES
T ss_pred EEEcc-CCCCCCCCEEEEEcCEEecC
Confidence 33322 11111222377889988754
No 82
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=89.12 E-value=3.9 Score=37.57 Aligned_cols=54 Identities=19% Similarity=0.096 Sum_probs=40.6
Q ss_pred cEEEEeEEEECCCCCCCCCcceeeceeeEEEEecEEec-CCeeEEeCCCCeeEEEEeeEEeC
Q 042768 184 DVHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKT-GDDCIPIGPGTKNLWIERVTCGP 244 (397)
Q Consensus 184 ~v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~i~~~~~ni~i~n~~~~~ 244 (397)
..+++|+.|-. ...||||... -+-+|+|+.+.. +.|++.++. ..++|.+.-..+
T Consensus 159 GatlkNvIiG~----~~~dGIHC~~-G~CtleNVwwedVcEDA~T~kg--~~~~I~GGgA~~ 213 (344)
T 3b4n_A 159 ATVKNLRISAS----GGADGIHCDS-GNCTIENVIWEDICEDAATNNG--KTMTIVGGIAHN 213 (344)
T ss_dssp CEEEEEEECTT----CCTTCEEEEE-SEEEEEEEEESSCSSCSEEECS--SEEEEESCEEEE
T ss_pred CcEEEEEEecC----CCccceEEcc-CCeeEEEEeehhcccccceecC--ceEEEECchhcc
Confidence 47888888855 5789999982 157899999987 899999994 356666655543
No 83
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=87.94 E-value=0.2 Score=47.45 Aligned_cols=38 Identities=34% Similarity=0.390 Sum_probs=27.0
Q ss_pred cCccCCCccchHHHHHHHHHHHhhcCCCcEEEEcCc-EEEecc
Q 042768 38 FGAKGNGVTDSTQAFAKAWAAACASTESATLYVPKG-RYLLGS 79 (397)
Q Consensus 38 fGA~~dg~tddt~aiq~Ai~~ac~~~~g~~v~~p~G-~Y~~~~ 79 (397)
=||+|||++|||+||.+||+++ ++ +.++=-.| ||.+..
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~~---~~-~~~IDG~G~T~kVs~ 42 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALNDT---PV-GQKINGNGKTYKVTS 42 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHHS---CT-TSCEECTTCEEECSS
T ss_pred CcccCCCccCcHHHHHHHhccC---CC-CeEEeCCCceEEeee
Confidence 4899999999999999999654 33 33343444 566654
No 84
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=84.27 E-value=30 Score=33.08 Aligned_cols=137 Identities=11% Similarity=0.079 Sum_probs=68.2
Q ss_pred EEEccCCeEEEeeeEecCcce----------EEEEeceecEEEEeEEEECCCCCCCCCccee-----------eceeeEE
Q 042768 155 SFTNSNNIRINGLLSLNSQMF----------HIVINGCKDVHVEGVTVIAPGNSPNTDGIHV-----------QLSMNVK 213 (397)
Q Consensus 155 ~~~~~~nv~I~~v~i~~~~~~----------~i~~~~~~~v~i~n~~i~~~~~~~~~DGi~~-----------~~s~nv~ 213 (397)
.....+++..++++|.|.... .+. ..++...+.+|.|....| -+.. +...+-.
T Consensus 196 ~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~-v~gDr~~fy~C~f~G~QD-----TLy~~~~~~~~~~~~d~~gRqy 269 (422)
T 3grh_A 196 FWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALR-TDGDQVQINNVNILGRQN-----TFFVTNSGVQNRLETNRQPRTL 269 (422)
T ss_dssp EEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEE-ECCSSEEEEEEEEECSTT-----CEEECCCCTTCSCCSSCCCEEE
T ss_pred EEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEE-ecCCcEEEEeeEEEeecc-----eeeeccccccccccccccccEE
Confidence 344578888888888875321 122 245667777777776432 1222 1234566
Q ss_pred EEecEEecCCeeEEeCCCCeeEEEEeeEEeCC------Ce-EEEeeccccCCcCcEEEEEEEeeEEECCc-ceEEEE-ee
Q 042768 214 ITNCTIKTGDDCIPIGPGTKNLWIERVTCGPG------HG-ISIGSLAKDLVEEGVQNVTVFKTVFTGTT-NGFRIK-SW 284 (397)
Q Consensus 214 I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~------~g-i~igs~~~~~~~~~v~ni~i~n~~~~~~~-~gi~i~-s~ 284 (397)
+++|.|...=|-|.= ....++++|++..- .| |.-.+. ....-..+.|.||++.... ...++. .|
T Consensus 270 y~~CyIeGtVDFIFG---~a~AvFe~C~I~s~~~~~~~~g~ITA~~t----~~~~~~Gfvf~nC~ita~~~~~~yLGRPW 342 (422)
T 3grh_A 270 VTNSYIEGDVDIVSG---RGAVVFDNTEFRVVNSRTQQEAYVFAPAT----LSNIYYGFLAVNSRFNAFGDGVAQLGRSL 342 (422)
T ss_dssp EESCEEEESEEEEEE---SSEEEEESCEEEECCSSCSSCCEEEEECC----BTTCCCCEEEESCEEEECSSSCBEEEEEE
T ss_pred EEecEEeccccEEcc---CceEEEEeeEEEEecCCCCCceEEEecCC----CCCCCCEEEEECCEEEeCCCCCEEcCCCC
Confidence 677777655454432 23566777766421 12 222221 1122345677777776321 122332 23
Q ss_pred cCCCCceEEcEEEEeeeeccC
Q 042768 285 ARPSNGFVQGVRFIDAVMRNV 305 (397)
Q Consensus 285 ~~~~~g~v~nI~~~ni~~~~~ 305 (397)
.. ..-..-.|.|.+..|.+.
T Consensus 343 ~~-ysrt~~qVVf~~s~l~~~ 362 (422)
T 3grh_A 343 DV-DANTNGQVVIRDSAINEG 362 (422)
T ss_dssp CC-STTBCCEEEEESCEECTT
T ss_pred CC-cCCcCccEEEEeCcccCc
Confidence 21 111223466666666654
No 85
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=80.55 E-value=20 Score=33.83 Aligned_cols=35 Identities=14% Similarity=0.120 Sum_probs=19.6
Q ss_pred eeEEEEeeEEeCCCeEEEeeccccCCcCcEEEEEEEee
Q 042768 233 KNLWIERVTCGPGHGISIGSLAKDLVEEGVQNVTVFKT 270 (397)
Q Consensus 233 ~ni~i~n~~~~~~~gi~igs~~~~~~~~~v~ni~i~n~ 270 (397)
.|-.|+|....++.|+.+|.-| ..+.++||++++|
T Consensus 308 ~nHii~Ni~~~~~lGVG~~~DG---~~~~v~ni~~~dc 342 (543)
T 3riq_A 308 TQHIIRNIITRDCMGIGAWWDG---QKNIIDNVVTYEA 342 (543)
T ss_dssp CCCEEEEEEEESCSSCSSEECS---SSCEEEEEEEESC
T ss_pred hhhhhhhhheeccceeeeeecC---CCCeEeeEEeecc
Confidence 4566667666666665554432 2334666665555
No 86
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=79.06 E-value=18 Score=33.37 Aligned_cols=81 Identities=17% Similarity=0.205 Sum_probs=51.9
Q ss_pred eeeEEEEecEEec-CCeeEEeCCC-----------------------CeeEEEEeeEEeCCCeEEEeeccccCCcCcEEE
Q 042768 209 SMNVKITNCTIKT-GDDCIPIGPG-----------------------TKNLWIERVTCGPGHGISIGSLAKDLVEEGVQN 264 (397)
Q Consensus 209 s~nv~I~n~~i~~-~dD~i~i~~~-----------------------~~ni~i~n~~~~~~~gi~igs~~~~~~~~~v~n 264 (397)
+-|..+++..... -.|++.+++. -.|-.|.|....++-|+.+|-.|+ .++++|
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG~---G~YVSN 345 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGK---GMYVSN 345 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECCSSEEEEEEEE---SCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecCC---CceEee
Confidence 4567777776554 4678888763 358889999888877776665432 346778
Q ss_pred EEEEeeEEECCcceEEEEeecCCCCceEEcEEEEeeeeccC
Q 042768 265 VTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFIDAVMRNV 305 (397)
Q Consensus 265 i~i~n~~~~~~~~gi~i~s~~~~~~g~v~nI~~~ni~~~~~ 305 (397)
|++++| ...|.....+ +-+|.||++-+.
T Consensus 346 itv~DC----AGsG~~~~t~---------~~~FtNi~vID~ 373 (559)
T 2vfm_A 346 ITVEDC----AGSGAYLLTH---------ESVFTNIAIIDT 373 (559)
T ss_dssp EEEESC----SSEEEEEEEE---------SCEEEEEEEESC
T ss_pred eEehhc----cCcceEEeec---------cceeeeeEEEec
Confidence 877777 3345555443 234566665443
No 87
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=78.48 E-value=18 Score=33.40 Aligned_cols=81 Identities=16% Similarity=0.233 Sum_probs=52.3
Q ss_pred eeeEEEEecEEec-CCeeEEeCCC-----------------------CeeEEEEeeEEeCCCeEEEeeccccCCcCcEEE
Q 042768 209 SMNVKITNCTIKT-GDDCIPIGPG-----------------------TKNLWIERVTCGPGHGISIGSLAKDLVEEGVQN 264 (397)
Q Consensus 209 s~nv~I~n~~i~~-~dD~i~i~~~-----------------------~~ni~i~n~~~~~~~gi~igs~~~~~~~~~v~n 264 (397)
+-|..+++..... -.|++.+++. -.|-.|.|....++-|+.+|-.|+ .++++|
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG~---G~YVSN 348 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSLGVGLGMDGS---GGYVSN 348 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEEE---SCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecCC---CceEee
Confidence 4567777776554 4678888763 358889999888877777665442 346788
Q ss_pred EEEEeeEEECCcceEEEEeecCCCCceEEcEEEEeeeeccC
Q 042768 265 VTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFIDAVMRNV 305 (397)
Q Consensus 265 i~i~n~~~~~~~~gi~i~s~~~~~~g~v~nI~~~ni~~~~~ 305 (397)
|++++| ...|.....+ +-+|.||++-+.
T Consensus 349 itv~DC----AGsG~~~~t~---------~~~FtNi~vID~ 376 (559)
T 2v5i_A 349 VTVQDC----AGAGMLAHTY---------NRVFSNITVIDC 376 (559)
T ss_dssp EEEESC----SSEEEEEEEE---------SCEEEEEEEESC
T ss_pred eEehhc----cCcceEEeec---------cceeeeeEEEec
Confidence 887777 3345555443 234666665544
No 88
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=73.83 E-value=28 Score=33.55 Aligned_cols=81 Identities=17% Similarity=0.205 Sum_probs=52.2
Q ss_pred eeeEEEEecEEec-CCeeEEeCCC-----------------------CeeEEEEeeEEeCCCeEEEeeccccCCcCcEEE
Q 042768 209 SMNVKITNCTIKT-GDDCIPIGPG-----------------------TKNLWIERVTCGPGHGISIGSLAKDLVEEGVQN 264 (397)
Q Consensus 209 s~nv~I~n~~i~~-~dD~i~i~~~-----------------------~~ni~i~n~~~~~~~gi~igs~~~~~~~~~v~n 264 (397)
+-|..+++..... -.|++.+++. -.|-.|.|....++-|+.+|-.|+ .++++|
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~slgvg~gmdg~---g~yvsn 452 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGK---GMYVSN 452 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEEE---SCEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecCC---CceEee
Confidence 4567777776554 4678888773 358889999888877777665442 346788
Q ss_pred EEEEeeEEECCcceEEEEeecCCCCceEEcEEEEeeeeccC
Q 042768 265 VTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFIDAVMRNV 305 (397)
Q Consensus 265 i~i~n~~~~~~~~gi~i~s~~~~~~g~v~nI~~~ni~~~~~ 305 (397)
|++++| ...|.....+ +-+|.||++-++
T Consensus 453 itv~dc----ag~g~~~~~~---------~~~ftni~vid~ 480 (666)
T 2xc1_A 453 ITVEDC----AGSGAYLLTH---------ESVFTNIAIIDT 480 (666)
T ss_dssp EEEESC----SSEEEEEEEE---------SCEEEEEEEESC
T ss_pred eEehhc----cCcceEEeec---------cceeeeeEEEec
Confidence 887777 3345555443 234556655443
No 89
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=72.13 E-value=62 Score=29.94 Aligned_cols=68 Identities=13% Similarity=0.067 Sum_probs=40.7
Q ss_pred CeeEEEEeeEEeCC--CeEEEeecc---------------ccCCcCcEEEEEEEeeEEECCcceEEEEeecCCCCceEEc
Q 042768 232 TKNLWIERVTCGPG--HGISIGSLA---------------KDLVEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQG 294 (397)
Q Consensus 232 ~~ni~i~n~~~~~~--~gi~igs~~---------------~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~~~~~~g~v~n 294 (397)
..|..+++...-.. +|+-+|+.. +|+...-..|=.|.|..+.++ -|+.+.-. + .+++|+|
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GMD-G-~G~YVSN 345 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGMD-G-KGMYVSN 345 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECC-SSEEEEEE-E-ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-C-CCceEee
Confidence 46888888876543 478877741 122222234666777777776 34444332 2 5678888
Q ss_pred EEEEeeee
Q 042768 295 VRFIDAVM 302 (397)
Q Consensus 295 I~~~ni~~ 302 (397)
|+++++.-
T Consensus 346 itv~DCAG 353 (559)
T 2vfm_A 346 ITVEDCAG 353 (559)
T ss_dssp EEEESCSS
T ss_pred eEehhccC
Confidence 88777643
No 90
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=69.77 E-value=82 Score=30.40 Aligned_cols=68 Identities=13% Similarity=0.067 Sum_probs=40.7
Q ss_pred CeeEEEEeeEEeCC--CeEEEeecc---------------ccCCcCcEEEEEEEeeEEECCcceEEEEeecCCCCceEEc
Q 042768 232 TKNLWIERVTCGPG--HGISIGSLA---------------KDLVEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQG 294 (397)
Q Consensus 232 ~~ni~i~n~~~~~~--~gi~igs~~---------------~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~~~~~~g~v~n 294 (397)
..|+.+++...-.. +|+-+|+.. +|+...-..|=.|.|..+.++ -|+.+.-. + .+++|+|
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~s-lgvg~gmd-g-~g~yvsn 452 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGMD-G-KGMYVSN 452 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEEE-E-ESCEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-C-CCceEee
Confidence 46888888876543 478887741 122222234666777777776 34444332 2 5678888
Q ss_pred EEEEeeee
Q 042768 295 VRFIDAVM 302 (397)
Q Consensus 295 I~~~ni~~ 302 (397)
|+++++.-
T Consensus 453 itv~dcag 460 (666)
T 2xc1_A 453 ITVEDCAG 460 (666)
T ss_dssp EEEESCSS
T ss_pred eEehhccC
Confidence 88877743
No 91
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=64.91 E-value=88 Score=28.94 Aligned_cols=68 Identities=19% Similarity=0.143 Sum_probs=40.5
Q ss_pred CeeEEEEeeEEeCC--CeEEEeecc---------------ccCCcCcEEEEEEEeeEEECCcceEEEEeecCCCCceEEc
Q 042768 232 TKNLWIERVTCGPG--HGISIGSLA---------------KDLVEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQG 294 (397)
Q Consensus 232 ~~ni~i~n~~~~~~--~gi~igs~~---------------~~~~~~~v~ni~i~n~~~~~~~~gi~i~s~~~~~~g~v~n 294 (397)
..|..+++...-.. +|+-+|+.. +|+...-..|=.|.|..+.++ -|+.+.-. + .+++|+|
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GMD-G-~G~YVSN 348 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNS-LGVGLGMD-G-SGGYVSN 348 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEEE-E-ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-C-CCceEee
Confidence 46888888876543 467777641 122222234666777777776 34444332 2 5678888
Q ss_pred EEEEeeee
Q 042768 295 VRFIDAVM 302 (397)
Q Consensus 295 I~~~ni~~ 302 (397)
|+++++.-
T Consensus 349 itv~DCAG 356 (559)
T 2v5i_A 349 VTVQDCAG 356 (559)
T ss_dssp EEEESCSS
T ss_pred eEehhccC
Confidence 88877743
No 92
>2zzv_A ABC transporter, solute-binding protein; periplasmic substrate binding protein, calcium, lactate, trap transporter, transport protein; 1.40A {Thermus thermophilus} PDB: 2zzw_A 2zzx_A
Probab=53.19 E-value=11 Score=35.20 Aligned_cols=11 Identities=27% Similarity=0.374 Sum_probs=0.0
Q ss_pred ChhhhHhHhHH
Q 042768 1 MERLFSSLFSS 11 (397)
Q Consensus 1 m~~~~~~~~~~ 11 (397)
|+|+|++++..
T Consensus 1 ~~~~~~~~~~~ 11 (361)
T 2zzv_A 1 MKRVSRRAFLR 11 (361)
T ss_dssp -----------
T ss_pred CchhHHHHHHh
Confidence 89999888744
No 93
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A
Probab=33.61 E-value=2.1e+02 Score=26.47 Aligned_cols=11 Identities=18% Similarity=0.338 Sum_probs=6.1
Q ss_pred EEEEccCCeEE
Q 042768 154 LSFTNSNNIRI 164 (397)
Q Consensus 154 i~~~~~~nv~I 164 (397)
+.+.+|++.+|
T Consensus 64 v~I~nc~~c~I 74 (352)
T 3bh7_B 64 FLIQDCENCNI 74 (352)
T ss_dssp EEEESCBSCEE
T ss_pred EEEecCcCCEE
Confidence 55555555554
No 94
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=31.30 E-value=2.2e+02 Score=26.92 Aligned_cols=89 Identities=13% Similarity=0.082 Sum_probs=43.2
Q ss_pred eeEEEEecEEecCCeeEEeCCCCeeEEEEeeEEeCCC--eEEEeeccccCCcCcEEEEEEEeeEEECC------------
Q 042768 210 MNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGH--GISIGSLAKDLVEEGVQNVTVFKTVFTGT------------ 275 (397)
Q Consensus 210 ~nv~I~n~~i~~~dD~i~i~~~~~ni~i~n~~~~~~~--gi~igs~~~~~~~~~v~ni~i~n~~~~~~------------ 275 (397)
.|-.|+|...+..- +|-++..-+--.++|.+...++ |+-+.. ....++||++-++.-.+.
T Consensus 308 ~nHii~Ni~~~~~l-GVG~~~DG~~~~v~ni~~~dcag~G~~~~~-----~~~~ftNitvI~~N~~~~~~nQI~i~G~~~ 381 (543)
T 3riq_A 308 TQHIIRNIITRDCM-GIGAWWDGQKNIIDNVVTYEAHKEGMFDRG-----TNNDITNITVVCANKDLTNLNQIVCEGGSR 381 (543)
T ss_dssp CCCEEEEEEEESCS-SCSSEECSSSCEEEEEEEESCSSCSEEECS-----SSCEEEEEEEESCSTTCSSCCSEEECSCCE
T ss_pred hhhhhhhhheeccc-eeeeeecCCCCeEeeEEeeccccCcceeec-----cCcceeeEEEEeccccCCCcceEEEecCcE
Confidence 34456666665421 2222222334455555555543 443322 123456666554432221
Q ss_pred cceEEEEeecCCCC-ceEEcEEEEeeeecc
Q 042768 276 TNGFRIKSWARPSN-GFVQGVRFIDAVMRN 304 (397)
Q Consensus 276 ~~gi~i~s~~~~~~-g~v~nI~~~ni~~~~ 304 (397)
-+|++|++.+..+- -..-|-++++++...
T Consensus 382 vnGi~I~~~~~~G~~I~APnStvS~i~g~v 411 (543)
T 3riq_A 382 LRGIMVHAYTTQGYAVYAPSSEVSNVSCAG 411 (543)
T ss_dssp EEEEEEECSSCSSCSEEEEEEEEEEEEECT
T ss_pred ecceEeeccCCCceEEECCCccccccccCC
Confidence 15888887654111 135677777777654
No 95
>2yuh_A Tubulin-specific chaperone C; microtubule, beta-tubulin folding, beta-roll, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.75 E-value=70 Score=26.51 Aligned_cols=11 Identities=0% Similarity=0.184 Sum_probs=6.3
Q ss_pred EEEEccCCeEE
Q 042768 154 LSFTNSNNIRI 164 (397)
Q Consensus 154 i~~~~~~nv~I 164 (397)
+.+.+|++++|
T Consensus 71 v~i~~C~~~~i 81 (179)
T 2yuh_A 71 VFLEDCSDCVL 81 (179)
T ss_dssp EEEESCBSCEE
T ss_pred EEEEeCCceEE
Confidence 55666666554
No 96
>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis}
Probab=26.63 E-value=2.3e+02 Score=23.60 Aligned_cols=11 Identities=0% Similarity=-0.058 Sum_probs=4.3
Q ss_pred EcEEEEeeeec
Q 042768 293 QGVRFIDAVMR 303 (397)
Q Consensus 293 ~nI~~~ni~~~ 303 (397)
+++.|++..+.
T Consensus 153 ~~a~f~~~~L~ 163 (214)
T 2w7z_A 153 XXLLLEACDLT 163 (214)
T ss_dssp EEEEEESCBCT
T ss_pred EEEEEEecccc
Confidence 33444443333
No 97
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A
Probab=20.35 E-value=2.1e+02 Score=26.53 Aligned_cols=10 Identities=10% Similarity=0.248 Sum_probs=4.9
Q ss_pred EEEEccCCeE
Q 042768 154 LSFTNSNNIR 163 (397)
Q Consensus 154 i~~~~~~nv~ 163 (397)
+++.+|+|.+
T Consensus 83 l~I~~c~nC~ 92 (352)
T 3bh7_B 83 VTIDDCTNCI 92 (352)
T ss_dssp EEEESCBSCE
T ss_pred EEEecCCCCE
Confidence 4455555443
No 98
>3o0r_C Nitric oxide reductase subunit C; oxidoreductase, electron transport, heme, iron, membrane, CY membrane; HET: HEM HEC; 2.70A {Pseudomonas aeruginosa}
Probab=20.31 E-value=52 Score=25.75 Aligned_cols=8 Identities=25% Similarity=0.326 Sum_probs=1.7
Q ss_pred ChhhhHhH
Q 042768 1 MERLFSSL 8 (397)
Q Consensus 1 m~~~~~~~ 8 (397)
|+++|.++
T Consensus 1 m~~~m~~~ 8 (146)
T 3o0r_C 1 MSETFTKG 8 (146)
T ss_dssp ----CCHH
T ss_pred CcHHHHHH
Confidence 55444443
No 99
>1njh_A Protein YOJF; structural genomics, PSI, protein structure initiative center for structural genomics, MCSG, unknown function; 1.70A {Bacillus subtilis} SCOP: b.128.1.1
Probab=20.16 E-value=2.5e+02 Score=21.36 Aligned_cols=70 Identities=14% Similarity=0.306 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHhhcCCCcEEEE----cCcEEEe--------cceeecCCCCCcceEEEEc-cEEEeeccccc-cCCCcc
Q 042768 48 STQAFAKAWAAACASTESATLYV----PKGRYLL--------GSVAFNGDCKSSDITFRID-GTLVAPADYRV-LGQADN 113 (397)
Q Consensus 48 dt~aiq~Ai~~ac~~~~g~~v~~----p~G~Y~~--------~~l~l~~~~~s~~v~l~~~-G~l~~~~~~~~-~~~~~~ 113 (397)
+.+++|+.|+.- .+.-||+ -.|-|-. ..-.++ |..+..+ |.|++...+.. ..-...
T Consensus 8 ~~~~VQ~~L~~f----~~~~VYiHlETTnGAYA~H~d~~~~~agafiR------Na~v~ye~~~i~G~gPyRvGLk~~~G 77 (119)
T 1njh_A 8 IKEDVQASLERY----ADRPVYIHLETTTGSYSAHLNEKNMTVVAYIR------NAKVTYHQAKIKGNGPYRVGLKTEEG 77 (119)
T ss_dssp CHHHHHHHHHHT----TTSCEEEEEEEEECC----------EEEEEEE------EEEECEEEEEEESSSSEEEEEEESSS
T ss_pred CHHHHHHHHHHh----cCCceEEEEEecCchhhhhccccccChhhEEE------eeEEEEEEeEEEcCCCcEEEEEcCCC
Confidence 567799999865 2445665 2344521 112343 5666655 56665322211 011146
Q ss_pred eEEEEeeeceEEec
Q 042768 114 WLSFEGVSGVSIIG 127 (397)
Q Consensus 114 ~i~~~~~~nv~I~G 127 (397)
|++.+|.....+..
T Consensus 78 WvYaeGLTh~e~d~ 91 (119)
T 1njh_A 78 WIYAEGLTEYTVDE 91 (119)
T ss_dssp EEEEEEECEEEECT
T ss_pred EEEEccceeeEEcC
Confidence 88888888877776
Done!