BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042769
(549 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 16/149 (10%)
Query: 397 RGGAQGR------------NVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALH 444
RGG +GR ++ L VS + GS+GTVV++G ++GRPVAVKR++
Sbjct: 11 RGGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFC 70
Query: 445 DVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFG 504
D+A EI+ L SD HPN++R+Y E F+Y++LE C +L DL+++ + S N
Sbjct: 71 DIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQ 130
Query: 505 ED----QATRAMIEYKLRLDSVKVIIRDL 529
++ R + L S+K+I RDL
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLKIIHRDL 159
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 16/149 (10%)
Query: 397 RGGAQGR------------NVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALH 444
RGG +GR ++ L VS + GS+GTVV++G ++GRPVAVKR++
Sbjct: 11 RGGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFC 70
Query: 445 DVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFG 504
D+A EI+ L SD HPN++R+Y E F+Y++LE C +L DL+++ + S N
Sbjct: 71 DIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQ 130
Query: 505 ED----QATRAMIEYKLRLDSVKVIIRDL 529
++ R + L S+K+I RDL
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLKIIHRDL 159
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 4/131 (3%)
Query: 403 RNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPN 462
+++ L VS + GS+GTVV++G ++GRPVAVKR++ D+A EI+ L SD HPN
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPN 70
Query: 463 IVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGED----QATRAMIEYKLR 518
++R+Y E F+Y++LE C +L DL+++ + S N ++ R +
Sbjct: 71 VIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 519 LDSVKVIIRDL 529
L S+K+I RDL
Sbjct: 131 LHSLKIIHRDL 141
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 4/131 (3%)
Query: 403 RNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPN 462
+++ L VS + GS+GTVV++G ++GRPVAVKR++ D+A EI+ L SD HPN
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPN 70
Query: 463 IVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGED----QATRAMIEYKLR 518
++R+Y E F+Y++LE C +L DL+++ + S N ++ R +
Sbjct: 71 VIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 519 LDSVKVIIRDL 529
L S+K+I RDL
Sbjct: 131 LHSLKIIHRDL 141
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 405 VGKL-FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNI 463
VGK+ F + G+ GT+VY G+++ R VAVKR++ A +E+Q L SD+HPN+
Sbjct: 21 VGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNV 80
Query: 464 VRWYGVENDKDFVYLSLERCTCSLDDLIQ 492
+R++ E D+ F Y+++E C +L + ++
Sbjct: 81 IRYFCTEKDRQFQYIAIELCAATLQEYVE 109
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 13/125 (10%)
Query: 393 NKLVRGGAQGRNVGKLFVSNTEIAKGSNGTV---VYEGIYEGRPVAVKRLVRA-LHDV-A 447
N +G +G ++ + + I +GS G V V +G R A K++ + + DV
Sbjct: 13 NLYFQGSTKG-DINQYYTLENTIGRGSWGEVKIAVQKGTRIRR--AAKKIPKYFVEDVDR 69
Query: 448 FKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQ 507
FK+ ++ S HPNI+R Y D +YL +E CT + + VF E
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGG-----ELFERVVHKRVFRESD 124
Query: 508 ATRAM 512
A R M
Sbjct: 125 AARIM 129
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 399 GAQGRNVGKLFVSNTEIAKGSNGTV---VYEGIYEGRPVAVKRLVRA-LHDV-AFKEIQN 453
G+ ++ + + I +GS G V V +G R A K++ + + DV FK+
Sbjct: 1 GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRR--AAKKIPKYFVEDVDRFKQEIE 58
Query: 454 LIASDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAM 512
++ S HPNI+R Y D +YL +E CT + + VF E A R M
Sbjct: 59 IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGG-----ELFERVVHKRVFRESDAARIM 112
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Query: 415 IAKGS-NGTVVYEGIYEGRPVAVKRL-VRALHDVAF-KEIQNLI---ASDQHPNIVRWYG 468
+ KGS G E I+ G VA+K + +A++ + +QN + +HP+I+ Y
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 469 VENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAM---IEYKLRLDSVKVI 525
D ++VYL LE C + + Y + F E++A M I L L S ++
Sbjct: 79 YFEDSNYVYLVLEMCH---NGEMNRYLKNRVKP-FSENEARHFMHQIITGMLYLHSHGIL 134
Query: 526 IRDLSL 531
RDL+L
Sbjct: 135 HRDLTL 140
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 18/92 (19%)
Query: 410 VSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQN-------LIASDQHPN 462
V ++ +G G VVY+G VAVK+L A+ D+ +E++ ++A QH N
Sbjct: 34 VGGNKMGEGGFG-VVYKGYVNNTTVAVKKLA-AMVDITTEELKQQFDQEIKVMAKCQHEN 91
Query: 463 IVRWYGVENDKD-----FVYLS----LERCTC 485
+V G +D D +VY+ L+R +C
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 18/92 (19%)
Query: 410 VSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQN-------LIASDQHPN 462
V ++ +G G VVY+G VAVK+L A+ D+ +E++ ++A QH N
Sbjct: 34 VGGNKMGEGGFG-VVYKGYVNNTTVAVKKLA-AMVDITTEELKQQFDQEIKVMAKCQHEN 91
Query: 463 IVRWYGVENDKD-----FVYLS----LERCTC 485
+V G +D D +VY+ L+R +C
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 18/92 (19%)
Query: 410 VSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQN-------LIASDQHPN 462
V ++ +G G VVY+G VAVK+L A+ D+ +E++ ++A QH N
Sbjct: 28 VGGNKMGEGGFG-VVYKGYVNNTTVAVKKLA-AMVDITTEELKQQFDQEIKVMAKCQHEN 85
Query: 463 IVRWYGVENDKD-----FVYLS----LERCTC 485
+V G +D D +VY+ L+R +C
Sbjct: 86 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 117
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ N + +A+K L +A + A E Q + +
Sbjct: 13 GRPLGKGKFGNVYLAREKNSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE L Y + S F E + + E
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAP-----LGTVYRELQKLSKFDEQRTATYITELA 118
Query: 517 LRLD---SVKVIIRDL 529
L S KVI RD+
Sbjct: 119 NALSYCHSKKVIHRDI 134
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 407 KLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA-------LHDVAFKEIQNLIASD 458
KLF EI GS G V + + VA+K++ + D+ KE++ +
Sbjct: 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI-IKEVR-FLQKL 111
Query: 459 QHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTY 494
+HPN +++ G + +L +E C S DL++ +
Sbjct: 112 RHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH 147
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 391 DLNKLVRGGAQGRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAV-------KRLVRAL 443
D+ +L N G+ + EI +GS TV Y+G+ V V ++L ++
Sbjct: 10 DIEELETKAVGXSNDGRFLKFDIEIGRGSFKTV-YKGLDTETTVEVAWCELQDRKLTKSE 68
Query: 444 HDVAFKEIQNLIASDQHPNIVRWY 467
FKE + QHPNIVR+Y
Sbjct: 69 RQ-RFKEEAEXLKGLQHPNIVRFY 91
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLV--RALHD---VAFKEIQN---LIASDQH 460
V E+ +G+ G V Y P K LV +AL D A K+ Q L+ + QH
Sbjct: 17 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH 76
Query: 461 PNIVRWYGVENDKDFVYLSLE 481
+IV++YGV D D + + E
Sbjct: 77 EHIVKFYGVCGDGDPLIMVFE 97
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 404 NVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALH----DVAFKEIQ---NLIA 456
+ LF+ ++ G+ G V + E R ++R+++ ++ V ++I+ ++
Sbjct: 19 TIDDLFIFKRKLGSGAFGDV---HLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLK 75
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERC 483
S HPNI++ + V D +Y+ +E C
Sbjct: 76 SLDHPNIIKIFEVFEDYHNMYIVMETC 102
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 407 KLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA-------LHDVAFKEIQNLIASD 458
KLF EI GS G V + + VA+K++ + D+ KE++ +
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI-IKEVR-FLQKL 72
Query: 459 QHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTY 494
+HPN +++ G + +L +E C S DL++ +
Sbjct: 73 RHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH 108
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 430 EGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481
+GR + + H+ + EI +L+ S HPNI++ + V DK + YL E
Sbjct: 76 KGRYSDDNKNIEKFHEEIYNEI-SLLKSLDHPNIIKLFDVFEDKKYFYLVTE 126
>pdb|3OC3|C Chain C, Crystal Structure Of The Mot1 N-Terminal Domain In Complex
With Tbp
pdb|3OC3|D Chain D, Crystal Structure Of The Mot1 N-Terminal Domain In Complex
With Tbp
pdb|3OCI|A Chain A, Crystal Structure Of Tbp (Tata Box Binding Protein)
pdb|3OCI|B Chain B, Crystal Structure Of Tbp (Tata Box Binding Protein)
Length = 218
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 327 LVAKGQFLLSGHPSLSNSRTAASKRKKVC-KLGKNGAVVEKKVENMSSGNENGFSI 381
+ A G+ +++G S +SR AA + K+ KLG N + K++N+ S + FSI
Sbjct: 93 IFASGKMVITGAKSEKSSRMAAQRYAKIIHKLGFNATFDDFKIQNIVSSCDIKFSI 148
>pdb|3EIK|A Chain A, Double Stranded Dna Binding Protein
pdb|3EIK|B Chain B, Double Stranded Dna Binding Protein
Length = 218
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 327 LVAKGQFLLSGHPSLSNSRTAASKRKKVC-KLGKNGAVVEKKVENMSSGNENGFSI 381
+ A G+ +++G S +SR AA + K+ KLG N + K++N+ S + FSI
Sbjct: 93 IFASGKMVITGAKSEKSSRMAAQRYAKIIHKLGFNATFDDFKIQNIVSSCDIKFSI 148
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 31/132 (23%)
Query: 419 SNGTVVYEGIYEGRPVAVKRLVRALHDVAF-------------KEIQNLIASDQHPNIVR 465
S+G VV E I G KR V ++ + +EI+ L+ QHPNI+
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIIT 85
Query: 466 WYGVENDKDFVYL--SLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAM------IEYKL 517
V +D VYL L R LD +++ F E +A+ + +EY
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKILR-------QKFFSEREASFVLHTIGKTVEY-- 136
Query: 518 RLDSVKVIIRDL 529
L S V+ RDL
Sbjct: 137 -LHSQGVVHRDL 147
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE L Y + S F E + + E
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAP-----LGTVYRELQKLSKFDEQRTATYITELA 144
Query: 517 LRLD---SVKVIIRDL 529
L S +VI RD+
Sbjct: 145 NALSYCHSKRVIHRDI 160
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 31/132 (23%)
Query: 419 SNGTVVYEGIYEGRPVAVKRLVRALHDVAF-------------KEIQNLIASDQHPNIVR 465
S+G VV E I G KR V ++ + +EI+ L+ QHPNI+
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIIT 85
Query: 466 WYGVENDKDFVYL--SLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAM------IEYKL 517
V +D VYL L R LD +++ F E +A+ + +EY
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKILR-------QKFFSEREASFVLHTIGKTVEY-- 136
Query: 518 RLDSVKVIIRDL 529
L S V+ RDL
Sbjct: 137 -LHSQGVVHRDL 147
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE L Y + S F E + + E
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAP-----LGTVYRELQKLSKFDEQRTATYITELA 144
Query: 517 LRLD---SVKVIIRDL 529
L S +VI RD+
Sbjct: 145 NALSYCHSKRVIHRDI 160
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE L Y + S F E + + E
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAP-----LGTVYRELQKLSKFDEQRTATYITELA 119
Query: 517 LRLD---SVKVIIRDL 529
L S +VI RD+
Sbjct: 120 NALSYCHSKRVIHRDI 135
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE L Y + S F E + + E
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP-----LGTVYRELQKLSKFDEQRTATYITELA 118
Query: 517 LRLD---SVKVIIRDL 529
L S +VI RD+
Sbjct: 119 NALSYCHSKRVIHRDI 134
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 17 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE L Y + S F E + + E
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAP-----LGTVYRELQKLSKFDEQRTATYITELA 122
Query: 517 LRLD---SVKVIIRDL 529
L S +VI RD+
Sbjct: 123 NALSYCHSKRVIHRDI 138
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE L Y + S F E + + E
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP-----LGTVYRELQKLSKFDEQRTATYITELA 118
Query: 517 LRLD---SVKVIIRDL 529
L S +VI RD+
Sbjct: 119 NALSYCHSKRVIHRDI 134
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE + Y + S F E + + E
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRG-----EVYKELQKLSKFDEQRTATYITELA 123
Query: 517 LRLD---SVKVIIRDL 529
L S +VI RD+
Sbjct: 124 NALSYCHSKRVIHRDI 139
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE L Y + S F E + + E
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAP-----LGTVYRELQKLSKFDEQRTATYITELA 121
Query: 517 LRLD---SVKVIIRDL 529
L S +VI RD+
Sbjct: 122 NALSYCHSKRVIHRDI 137
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE L Y + S F E + + E
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAP-----LGTVYRELQKLSKFDEQRTATYITELA 123
Query: 517 LRLD---SVKVIIRDL 529
L S +VI RD+
Sbjct: 124 NALSYCHSKRVIHRDI 139
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE L Y + S F E + + E
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAP-----LGTVYRELQKLSKFDEQRTATYITELA 121
Query: 517 LRLD---SVKVIIRDL 529
L S +VI RD+
Sbjct: 122 NALSYCHSKRVIHRDI 137
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE L Y + S F E + + E
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP-----LGTVYRELQKLSKFDEQRTATYITELA 118
Query: 517 LRLD---SVKVIIRDL 529
L S +VI RD+
Sbjct: 119 NALSYCHSKRVIHRDI 134
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLE 481
+HPNI+R YG +D VYL LE
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILE 93
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE L Y + S F E + + E
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAP-----LGTVYRELQKLSKFDEQRTATYITELA 121
Query: 517 LRLD---SVKVIIRDL 529
L S +VI RD+
Sbjct: 122 NALSYCHSKRVIHRDI 137
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLE 481
+HPNI+R YG +D VYL LE
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILE 93
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 17/79 (21%)
Query: 423 VVYEGIYEGRPVAVKRLVRALHDVAFKEIQN-------LIASDQHPNIVRWYGVENDKD- 474
VVY+G VAVK+L A+ D+ +E++ + A QH N+V G +D D
Sbjct: 37 VVYKGYVNNTTVAVKKLA-AMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDD 95
Query: 475 ----FVYLS----LERCTC 485
+VY L+R +C
Sbjct: 96 LCLVYVYXPNGSLLDRLSC 114
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE L Y + S F E + + E
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAP-----LGTVYRELQKLSKFDEQRTATYITELA 123
Query: 517 LRLD---SVKVIIRDL 529
L S +VI RD+
Sbjct: 124 NALSYCHSKRVIHRDI 139
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLE 481
+HPNI+R YG +D VYL LE
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILE 90
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 30 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 80
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE L Y + S F E + + E
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAP-----LGTVYRELQKLSKFDEQRTATYITELA 135
Query: 517 LRLD---SVKVIIRDL 529
L S +VI RD+
Sbjct: 136 NALSYCHSKRVIHRDI 151
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE L Y + S F E + + E
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP-----LGTVYRELQKLSKFDEQRTATYITELA 118
Query: 517 LRLD---SVKVIIRDL 529
L S +VI RD+
Sbjct: 119 NALSYCHSKRVIHRDI 134
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE L Y + S F E + + E
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP-----LGTVYRELQKLSKFDEQRTATYITELA 118
Query: 517 LRLD---SVKVIIRDL 529
L S +VI RD+
Sbjct: 119 NALSYCHSKRVIHRDI 134
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLE 481
+HPNI+R YG +D VYL LE
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILE 91
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLE 481
+HPNI+R YG +D VYL LE
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILE 89
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLE 481
+HPNI+R YG +D VYL LE
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILE 89
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLE 481
+HPNI+R YG +D VYL LE
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILE 90
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLE 481
+HPNI+R YG +D VYL LE
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILE 91
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 12 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516
+HPNI+R YG +D VYL LE L Y + S F E + + E
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAP-----LGTVYRELQKLSKFDEQRTATYITELA 117
Query: 517 LRLD---SVKVIIRDL 529
L S +VI RD+
Sbjct: 118 NALSYCHSKRVIHRDI 133
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLE 481
+HPNI+R YG +D VYL LE
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILE 88
>pdb|2IS7|A Chain A, Crystal Structure Of Aldose Reductase Complexed With
Dichlorophenylacetic Acid
Length = 315
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 30/67 (44%)
Query: 64 VKTAPHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEEQKSASYKHDKV 123
++ P++T+E + V + G R + P S L++ K+ + KHDK
Sbjct: 184 IECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKHDKT 243
Query: 124 NNEQLVK 130
+ L++
Sbjct: 244 TAQVLIR 250
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLE 481
+HPNI+R YG +D VYL LE
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILE 91
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLE 481
+HPNI+R YG +D VYL LE
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILE 88
>pdb|2IPW|A Chain A, Crystal Structure Of C298a W219y Aldose Reductase
Complexed With Dichlorophenylacetic Acid
pdb|2ISF|A Chain A, Crystal Structure Of C298a W219y Aldose Reductase
Complexed With Phenylacetic Acid
pdb|1AZ1|A Chain A, Alrestatin Bound To C298aW219Y MUTANT HUMAN ALDOSE
Reductase
pdb|1AZ2|A Chain A, Citrate Bound, C298aW219Y MUTANT HUMAN ALDOSE REDUCTASE
Length = 315
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 30/67 (44%)
Query: 64 VKTAPHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEEQKSASYKHDKV 123
++ P++T+E + V + G R Y P S L++ K+ + KH+K
Sbjct: 184 IECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPYAKPEDPSLLEDPRIKAIAAKHNKT 243
Query: 124 NNEQLVK 130
+ L++
Sbjct: 244 TAQVLIR 250
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQ-----NLIA 456
GR +GK N +A+ + +A+K L +A + A E Q + +
Sbjct: 10 GRPLGKGKFGNVYLAREKQRKFI---------LALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 457 SDQHPNIVRWYGVENDKDFVYLSLE 481
+HPNI+R YG +D VYL LE
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILE 85
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 454 LIASDQHPNIVRWYGVENDKDFVYLSLERC 483
L+ HPNI R Y V D+ ++ L +E C
Sbjct: 81 LMKKLHHPNIARLYEVYEDEQYICLVMELC 110
>pdb|2HZ6|A Chain A, The Crystal Structure Of Human Ire1-Alpha Luminal Domain
Length = 369
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 14/145 (9%)
Query: 52 GRMKLPQSIDDYVKTAPHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNE 111
G KLP +I + V+ +P + +G + +G K +V++ TG +T SS +
Sbjct: 71 GLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTL-----SSAFADS 125
Query: 112 EQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITR-----TDYTLQSFEPNSDNV 166
S S + E + T T EL+ Y + DY + F N D +
Sbjct: 126 LSPSTSLLYLG-RTEYTITMYDTKTRELRWNATYFDYAASLPEDDVDYKMSHFVSNGDGL 184
Query: 167 SWSMTV-AEIGYAFLCQDFENPFIG 190
+TV +E G Q++ +P +
Sbjct: 185 --VVTVDSESGDVLWIQNYASPVVA 207
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Query: 450 EIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481
EIQ+ + +HPNI+R YG +D VYL LE
Sbjct: 64 EIQSHL---RHPNILRLYGYFHDATRVYLILE 92
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 10/64 (15%)
Query: 415 IAKGSNGTVVYEGIY--EGRPVAVKRLVRALHD-------VAFKEIQNLIASDQHPNIVR 465
+ G+ GTV Y+GI+ EG V + ++ L++ V F + ++AS HP++VR
Sbjct: 23 LGSGAFGTV-YKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 466 WYGV 469
GV
Sbjct: 82 LLGV 85
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Query: 450 EIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481
EIQ+ + +HPNI+R YG +D VYL LE
Sbjct: 64 EIQSHL---RHPNILRLYGYFHDATRVYLILE 92
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 409 FVSNTEIAKGSNGTVVYEG--IYEGRPVAVKRL-----VRALHDVAFKEIQNLIASDQHP 461
F +I +G+ G VVY+ G VA+K++ + A +EI +L+ HP
Sbjct: 7 FQKVEKIGEGTYG-VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKELNHP 64
Query: 462 NIVRWYGVENDKDFVYLSLERCTCSLDDLI 491
NIV+ V + ++ +YL E + L D +
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSMDLKDFM 94
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 409 FVSNTEIAKGSNGTVVYEG--IYEGRPVAVKRL-----VRALHDVAFKEIQNLIASDQHP 461
F +I +G+ G VVY+ G VA+K++ + A +EI +L+ HP
Sbjct: 8 FQKVEKIGEGTYG-VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKELNHP 65
Query: 462 NIVRWYGVENDKDFVYLSLERCTCSLDDLI 491
NIV+ V + ++ +YL E + L D +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMDLKDFM 95
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 10/64 (15%)
Query: 415 IAKGSNGTVVYEGIY--EGRPVAVKRLVRALHD-------VAFKEIQNLIASDQHPNIVR 465
+ G+ GTV Y+GI+ EG V + ++ L++ V F + ++AS HP++VR
Sbjct: 46 LGSGAFGTV-YKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 466 WYGV 469
GV
Sbjct: 105 LLGV 108
>pdb|3S8M|A Chain A, The Crystal Structure Of Fabv
Length = 422
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 7 TGTPIYSSYQAPVQATVDQDNASELTNSFFIDCGEDWGLYAHGLLG 52
T T I ++ +QA+++ +A E+ ++ + G+DW L+ L G
Sbjct: 186 TATAIDTNKDTIIQASIEPASAQEIEDTITVXGGQDWELWIDALEG 231
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 424 VYEGIYE-GRPVAVKRLVRALHDV-AFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481
V+ G Y VAVK L V AF E NL+ + QH +VR Y V ++ +Y+ E
Sbjct: 28 VWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE 87
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 409 FVSNTEIAKGSNG-TVVYEGIYEGRPVAVK-----RLVRALHDVAFKEIQNLIASDQHPN 462
+V +I +GS G ++ + +GR +K R+ + + +E+ ++A+ +HPN
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVA-VLANMKHPN 84
Query: 463 IVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEYKLRLDSV 522
IV++ + +Y+ ++ C DL + ++ +F EDQ ++ L L V
Sbjct: 85 IVQYRESFEENGSLYIVMDYCEGG--DLFKRI-NAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 523 ---KVIIRDL 529
K++ RD+
Sbjct: 142 HDRKILHRDI 151
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 449 KEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481
+EI+ L+ QHPNI+ V +D +VY+ E
Sbjct: 64 EEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 449 KEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481
+EI+ L+ QHPNI+ V +D +VY+ E
Sbjct: 64 EEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,263,091
Number of Sequences: 62578
Number of extensions: 667025
Number of successful extensions: 2020
Number of sequences better than 100.0: 71
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1968
Number of HSP's gapped (non-prelim): 73
length of query: 549
length of database: 14,973,337
effective HSP length: 104
effective length of query: 445
effective length of database: 8,465,225
effective search space: 3767025125
effective search space used: 3767025125
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)