Query 042769
Match_columns 549
No_of_seqs 454 out of 2736
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 09:16:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042769.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042769hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1027 Serine/threonine prote 100.0 9.3E-40 2E-44 355.7 20.0 436 34-530 67-633 (903)
2 KOG0595 Serine/threonine-prote 99.9 5E-23 1.1E-27 210.8 6.0 126 402-535 6-145 (429)
3 KOG0575 Polo-like serine/threo 99.8 2.6E-21 5.7E-26 206.7 5.1 133 407-546 18-165 (592)
4 KOG0600 Cdc2-related protein k 99.8 2.4E-21 5.2E-26 202.7 1.5 133 409-547 119-266 (560)
5 KOG0661 MAPK related serine/th 99.8 5.8E-21 1.3E-25 198.6 2.6 140 405-549 8-160 (538)
6 KOG0611 Predicted serine/threo 99.8 1.5E-20 3.2E-25 191.7 4.7 136 404-546 50-200 (668)
7 KOG0598 Ribosomal protein S6 k 99.8 4.2E-20 9.2E-25 187.7 7.9 135 405-547 24-173 (357)
8 KOG0615 Serine/threonine prote 99.8 2.2E-20 4.8E-25 191.4 4.3 124 405-535 170-312 (475)
9 KOG0592 3-phosphoinositide-dep 99.8 4.3E-20 9.2E-25 194.8 6.4 135 403-544 70-219 (604)
10 KOG0605 NDR and related serine 99.8 5.9E-20 1.3E-24 193.8 5.7 136 404-547 139-289 (550)
11 KOG0659 Cdk activating kinase 99.8 3.2E-20 6.9E-25 181.1 -0.5 135 408-548 3-150 (318)
12 KOG0663 Protein kinase PITSLRE 99.8 1.1E-19 2.5E-24 182.0 3.0 139 403-548 73-226 (419)
13 KOG0583 Serine/threonine prote 99.8 3.5E-19 7.5E-24 188.1 5.0 137 404-547 15-169 (370)
14 KOG0616 cAMP-dependent protein 99.8 7.3E-19 1.6E-23 173.8 6.7 136 404-547 42-192 (355)
15 KOG0581 Mitogen-activated prot 99.7 5.7E-19 1.2E-23 179.6 4.4 130 409-545 81-225 (364)
16 KOG0593 Predicted protein kina 99.7 4E-19 8.7E-24 176.0 0.1 133 409-547 4-149 (396)
17 KOG1187 Serine/threonine prote 99.7 1.6E-18 3.5E-23 182.6 3.0 138 406-548 74-226 (361)
18 KOG0591 NIMA (never in mitosis 99.7 6.4E-19 1.4E-23 173.1 -0.1 140 404-547 17-176 (375)
19 KOG0585 Ca2+/calmodulin-depend 99.7 3.2E-18 6.9E-23 178.2 3.7 135 401-544 92-255 (576)
20 KOG0588 Serine/threonine prote 99.7 2.1E-18 4.5E-23 185.5 2.1 137 402-546 8-159 (786)
21 KOG0197 Tyrosine kinases [Sign 99.7 3.2E-18 6.9E-23 181.1 3.0 135 409-549 208-353 (468)
22 KOG0597 Serine-threonine prote 99.7 1.3E-18 2.9E-23 183.8 -0.1 133 409-548 4-149 (808)
23 KOG0580 Serine/threonine prote 99.7 1.6E-18 3.5E-23 167.0 0.4 135 403-543 19-168 (281)
24 KOG1026 Nerve growth factor re 99.7 8.2E-18 1.8E-22 186.1 5.8 140 409-549 488-653 (774)
25 KOG0192 Tyrosine kinase specif 99.7 5.6E-18 1.2E-22 178.0 4.0 133 409-547 43-192 (362)
26 KOG0694 Serine/threonine prote 99.7 3.7E-18 8E-23 184.7 2.4 137 404-548 366-517 (694)
27 cd05628 STKc_NDR1 Catalytic do 99.7 6.9E-18 1.5E-22 177.6 4.1 132 409-547 3-149 (363)
28 KOG0594 Protein kinase PCTAIRE 99.7 3.8E-18 8.3E-23 173.1 1.9 137 409-548 13-169 (323)
29 KOG0607 MAP kinase-interacting 99.7 4E-18 8.6E-23 169.9 2.0 128 408-541 78-218 (463)
30 cd05599 STKc_NDR_like Catalyti 99.7 1.1E-17 2.4E-22 175.6 3.7 133 408-547 2-149 (364)
31 cd05629 STKc_NDR_like_fungal C 99.7 1.4E-17 3E-22 176.1 3.9 132 409-547 3-149 (377)
32 KOG4250 TANK binding protein k 99.7 2.1E-17 4.6E-22 179.3 5.0 133 409-545 15-165 (732)
33 cd05625 STKc_LATS1 Catalytic d 99.7 1.6E-17 3.6E-22 175.9 3.9 133 408-547 2-149 (382)
34 KOG0582 Ste20-like serine/thre 99.7 2E-17 4.4E-22 171.3 4.2 136 405-545 24-172 (516)
35 cd05626 STKc_LATS2 Catalytic d 99.7 2.2E-17 4.8E-22 175.0 4.5 132 408-546 2-148 (381)
36 PTZ00263 protein kinase A cata 99.7 2.2E-17 4.7E-22 171.5 3.9 137 403-547 15-166 (329)
37 KOG0660 Mitogen-activated prot 99.7 5.3E-17 1.2E-21 164.7 6.6 136 405-547 20-173 (359)
38 cd05598 STKc_LATS Catalytic do 99.7 2.7E-17 5.8E-22 173.7 4.3 131 409-546 3-148 (376)
39 KOG0610 Putative serine/threon 99.7 1.9E-17 4.1E-22 170.2 2.7 133 409-546 79-226 (459)
40 KOG0198 MEKK and related serin 99.7 3.5E-17 7.7E-22 167.8 4.0 133 409-547 19-166 (313)
41 KOG0662 Cyclin-dependent kinas 99.7 8.6E-18 1.9E-22 155.7 -0.5 133 409-547 4-149 (292)
42 cd05600 STKc_Sid2p_Dbf2p Catal 99.7 3.3E-17 7.2E-22 170.1 3.2 132 409-547 3-149 (333)
43 KOG0194 Protein tyrosine kinas 99.7 5.4E-17 1.2E-21 173.8 4.4 132 411-548 161-311 (474)
44 cd07871 STKc_PCTAIRE3 Catalyti 99.7 4.1E-17 8.9E-22 165.8 3.3 133 409-547 7-151 (288)
45 cd05102 PTKc_VEGFR3 Catalytic 99.6 8.2E-17 1.8E-21 167.2 5.6 142 407-548 7-223 (338)
46 cd05571 STKc_PKB Catalytic dom 99.6 4.4E-17 9.6E-22 168.7 3.4 128 413-547 1-143 (323)
47 cd05627 STKc_NDR2 Catalytic do 99.6 5.3E-17 1.2E-21 170.6 4.0 132 409-547 3-149 (360)
48 KOG0586 Serine/threonine prote 99.6 7E-17 1.5E-21 173.1 4.9 136 401-544 51-200 (596)
49 cd05612 STKc_PRKX_like Catalyt 99.6 3.6E-17 7.8E-22 166.6 2.3 133 408-547 2-149 (291)
50 cd05595 STKc_PKB_beta Catalyti 99.6 7E-17 1.5E-21 167.3 4.0 129 413-548 1-144 (323)
51 KOG0033 Ca2+/calmodulin-depend 99.6 2.3E-17 4.9E-22 159.5 0.2 121 403-530 7-137 (355)
52 cd07869 STKc_PFTAIRE1 Catalyti 99.6 6.7E-17 1.4E-21 165.3 3.2 134 408-547 6-151 (303)
53 cd07859 STKc_TDY_MAPK_plant Ca 99.6 8.5E-17 1.8E-21 166.5 3.9 132 409-547 2-151 (338)
54 cd05604 STKc_SGK3 Catalytic do 99.6 8.3E-17 1.8E-21 166.7 3.7 129 413-547 1-144 (325)
55 KOG0667 Dual-specificity tyros 99.6 1.2E-16 2.7E-21 172.5 5.0 135 405-543 184-333 (586)
56 cd05573 STKc_ROCK_NDR_like Cat 99.6 6.8E-17 1.5E-21 168.3 2.8 133 408-547 2-149 (350)
57 cd05575 STKc_SGK Catalytic dom 99.6 9.1E-17 2E-21 166.2 3.6 129 413-547 1-144 (323)
58 cd05592 STKc_nPKC_theta_delta 99.6 9.9E-17 2.2E-21 165.6 3.9 129 413-547 1-144 (316)
59 cd05597 STKc_DMPK_like Catalyt 99.6 9.8E-17 2.1E-21 166.8 3.4 134 408-547 2-150 (331)
60 cd05621 STKc_ROCK2 Catalytic d 99.6 1.1E-16 2.5E-21 169.3 4.0 133 407-547 43-190 (370)
61 KOG0612 Rho-associated, coiled 99.6 8.6E-17 1.9E-21 181.4 3.0 131 408-544 76-220 (1317)
62 cd05603 STKc_SGK2 Catalytic do 99.6 1.1E-16 2.5E-21 165.2 3.6 129 413-547 1-144 (321)
63 cd05593 STKc_PKB_gamma Catalyt 99.6 1.2E-16 2.5E-21 166.1 3.5 128 413-547 1-143 (328)
64 cd05590 STKc_nPKC_eta Catalyti 99.6 1.1E-16 2.4E-21 165.5 3.4 129 413-547 1-144 (320)
65 PTZ00426 cAMP-dependent protei 99.6 1.3E-16 2.9E-21 166.8 3.9 132 409-547 32-179 (340)
66 cd05588 STKc_aPKC Catalytic do 99.6 1.3E-16 2.9E-21 165.6 3.8 129 413-547 1-144 (329)
67 cd05591 STKc_nPKC_epsilon Cata 99.6 1.3E-16 2.7E-21 165.0 3.5 129 413-547 1-144 (321)
68 cd05624 STKc_MRCK_beta Catalyt 99.6 1.7E-16 3.7E-21 165.0 4.3 134 408-547 2-150 (331)
69 cd05631 STKc_GRK4 Catalytic do 99.6 2.2E-16 4.8E-21 160.2 4.9 134 409-547 2-150 (285)
70 cd05602 STKc_SGK1 Catalytic do 99.6 1.5E-16 3.3E-21 164.6 3.7 129 413-547 1-144 (325)
71 cd05585 STKc_YPK1_like Catalyt 99.6 1.4E-16 3E-21 164.0 3.3 126 415-547 1-141 (312)
72 cd05620 STKc_nPKC_delta Cataly 99.6 1.5E-16 3.3E-21 164.2 3.6 129 413-547 1-144 (316)
73 cd05618 STKc_aPKC_iota Catalyt 99.6 1.4E-16 3E-21 165.6 3.1 129 413-547 1-144 (329)
74 PHA03212 serine/threonine kina 99.6 1.8E-16 4E-21 169.0 4.0 129 408-546 93-229 (391)
75 cd05596 STKc_ROCK Catalytic do 99.6 1.6E-16 3.5E-21 168.0 3.6 131 409-547 45-190 (370)
76 cd05614 STKc_MSK2_N N-terminal 99.6 2E-16 4.4E-21 164.0 4.0 133 409-547 2-153 (332)
77 cd05587 STKc_cPKC Catalytic do 99.6 2.3E-16 5.1E-21 163.2 4.3 133 409-547 2-149 (324)
78 cd05622 STKc_ROCK1 Catalytic d 99.6 1.8E-16 3.8E-21 167.8 3.4 133 407-547 43-190 (371)
79 cd05615 STKc_cPKC_alpha Cataly 99.6 1.8E-16 3.8E-21 164.3 3.3 133 409-547 2-149 (323)
80 cd05601 STKc_CRIK Catalytic do 99.6 2E-16 4.3E-21 163.9 3.7 134 408-547 2-150 (330)
81 KOG0032 Ca2+/calmodulin-depend 99.6 2.5E-16 5.4E-21 166.8 4.5 122 402-530 30-162 (382)
82 cd05616 STKc_cPKC_beta Catalyt 99.6 2.5E-16 5.4E-21 163.0 4.3 133 409-547 2-149 (323)
83 KOG0690 Serine/threonine prote 99.6 2.3E-16 5.1E-21 157.6 3.2 137 403-547 165-316 (516)
84 cd05589 STKc_PKN Catalytic dom 99.6 2.5E-16 5.5E-21 163.0 3.5 132 409-547 1-149 (324)
85 KOG2052 Activin A type IB rece 99.6 2.5E-16 5.3E-21 163.2 3.0 137 402-546 206-363 (513)
86 cd05594 STKc_PKB_alpha Catalyt 99.6 2.9E-16 6.3E-21 162.6 3.4 128 413-547 1-144 (325)
87 KOG4717 Serine/threonine prote 99.6 1.4E-16 2.9E-21 166.9 0.8 123 402-530 13-145 (864)
88 cd05619 STKc_nPKC_theta Cataly 99.6 3.2E-16 6.9E-21 162.0 3.4 129 413-547 1-144 (316)
89 PHA03207 serine/threonine kina 99.6 5E-16 1.1E-20 165.5 4.9 135 404-547 89-233 (392)
90 cd05104 PTKc_Kit Catalytic dom 99.6 2.6E-16 5.7E-21 166.7 2.8 141 408-548 36-263 (375)
91 cd05617 STKc_aPKC_zeta Catalyt 99.6 4E-16 8.7E-21 161.9 4.0 129 413-547 1-144 (327)
92 KOG0658 Glycogen synthase kina 99.6 1.2E-16 2.5E-21 162.6 -0.4 138 401-542 18-169 (364)
93 cd05570 STKc_PKC Catalytic dom 99.6 4.2E-16 9.1E-21 161.0 3.7 129 413-547 1-144 (318)
94 cd05582 STKc_RSK_N N-terminal 99.6 4.4E-16 9.5E-21 160.6 3.6 128 413-547 2-146 (318)
95 cd05605 STKc_GRK4_like Catalyt 99.6 6E-16 1.3E-20 157.0 4.5 134 409-547 2-150 (285)
96 KOG0589 Serine/threonine prote 99.6 1.8E-16 3.8E-21 167.2 0.6 135 408-547 5-154 (426)
97 KOG0666 Cyclin C-dependent kin 99.6 4.8E-16 1.1E-20 154.7 3.6 137 409-547 26-184 (438)
98 cd05623 STKc_MRCK_alpha Cataly 99.6 6.5E-16 1.4E-20 160.6 4.7 133 408-546 2-149 (332)
99 cd07853 STKc_NLK Catalytic dom 99.6 3.8E-16 8.2E-21 164.9 2.8 132 409-547 2-151 (372)
100 cd07872 STKc_PCTAIRE2 Catalyti 99.6 4.7E-16 1E-20 159.5 3.4 133 409-547 8-152 (309)
101 cd05584 STKc_p70S6K Catalytic 99.6 4.2E-16 9E-21 161.4 2.9 128 413-547 2-148 (323)
102 cd05586 STKc_Sck1_like Catalyt 99.6 5.9E-16 1.3E-20 160.5 3.9 127 415-547 1-144 (330)
103 PTZ00036 glycogen synthase kin 99.6 8.5E-16 1.8E-20 166.4 5.3 138 406-547 65-219 (440)
104 KOG0577 Serine/threonine prote 99.6 9E-17 2E-21 170.5 -2.7 132 407-544 26-171 (948)
105 PRK11138 outer membrane biogen 99.6 2.2E-15 4.7E-20 160.9 7.6 131 1-173 46-189 (394)
106 PHA03209 serine/threonine kina 99.6 5.9E-16 1.3E-20 162.8 3.2 131 408-547 67-205 (357)
107 cd06649 PKc_MEK2 Catalytic dom 99.6 8.2E-16 1.8E-20 159.8 3.9 134 407-547 5-152 (331)
108 cd05106 PTKc_CSF-1R Catalytic 99.6 7.4E-16 1.6E-20 163.2 3.5 140 408-547 39-260 (374)
109 KOG0574 STE20-like serine/thre 99.6 5.3E-17 1.1E-21 160.6 -4.9 132 409-546 35-176 (502)
110 cd07848 STKc_CDKL5 Catalytic d 99.6 4.3E-16 9.4E-21 157.4 1.5 134 408-547 2-148 (287)
111 cd05064 PTKc_EphR_A10 Catalyti 99.6 9E-16 2E-20 153.8 3.8 131 409-545 7-153 (266)
112 cd06617 PKc_MKK3_6 Catalytic d 99.6 9E-16 2E-20 154.4 3.6 138 408-547 2-152 (283)
113 PLN00034 mitogen-activated pro 99.6 1.4E-15 3.1E-20 159.3 5.2 128 409-547 76-216 (353)
114 cd07876 STKc_JNK2 Catalytic do 99.6 1E-15 2.2E-20 160.8 3.7 134 405-547 19-171 (359)
115 KOG1152 Signal transduction se 99.6 8.3E-16 1.8E-20 163.2 3.1 134 404-544 559-715 (772)
116 KOG1094 Discoidin domain recep 99.6 4.4E-16 9.4E-21 165.4 0.9 137 407-548 538-686 (807)
117 cd05096 PTKc_DDR1 Catalytic do 99.6 1.3E-15 2.8E-20 155.7 4.2 139 408-547 6-186 (304)
118 KOG0578 p21-activated serine/t 99.6 2.5E-16 5.4E-21 167.6 -1.2 130 408-545 274-415 (550)
119 cd05610 STKc_MASTL Catalytic d 99.6 1.1E-15 2.4E-20 173.8 3.8 132 409-547 6-152 (669)
120 cd05608 STKc_GRK1 Catalytic do 99.6 1.7E-15 3.7E-20 153.3 4.6 130 415-547 1-145 (280)
121 cd06650 PKc_MEK1 Catalytic dom 99.6 1.2E-15 2.5E-20 158.9 3.1 134 407-547 5-152 (333)
122 PTZ00267 NIMA-related protein 99.6 2.1E-15 4.5E-20 165.1 5.2 137 408-547 68-217 (478)
123 KOG0604 MAP kinase-activated p 99.6 3.9E-15 8.4E-20 147.8 6.5 121 404-530 58-188 (400)
124 cd07873 STKc_PCTAIRE1 Catalyti 99.6 1.4E-15 2.9E-20 155.3 3.5 132 409-546 8-151 (301)
125 KOG0608 Warts/lats-like serine 99.6 4.7E-15 1E-19 158.7 7.6 132 408-546 630-776 (1034)
126 PRK11138 outer membrane biogen 99.6 5.3E-15 1.1E-19 157.9 8.0 119 29-174 116-235 (394)
127 cd07862 STKc_CDK6 Catalytic do 99.6 1.3E-15 2.7E-20 154.3 2.9 136 408-547 2-158 (290)
128 cd05114 PTKc_Tec_Rlk Catalytic 99.6 1.9E-15 4E-20 150.2 3.8 133 409-547 6-148 (256)
129 TIGR03300 assembly_YfgL outer 99.6 5.8E-15 1.3E-19 156.3 7.8 133 1-174 42-175 (377)
130 PHA03211 serine/threonine kina 99.5 2.4E-15 5.3E-20 163.6 4.7 133 406-547 168-308 (461)
131 cd07863 STKc_CDK4 Catalytic do 99.5 1.7E-15 3.7E-20 153.0 3.0 135 409-547 2-156 (288)
132 KOG1989 ARK protein kinase fam 99.5 3.2E-15 6.9E-20 166.3 5.3 130 409-542 39-189 (738)
133 cd07844 STKc_PCTAIRE_like Cata 99.5 2.3E-15 4.9E-20 152.5 3.8 132 409-546 7-150 (291)
134 cd06615 PKc_MEK Catalytic doma 99.5 2.7E-15 5.9E-20 154.0 4.4 131 409-546 3-147 (308)
135 cd05632 STKc_GRK5 Catalytic do 99.5 3.3E-15 7.1E-20 151.6 4.7 133 409-546 2-149 (285)
136 cd05630 STKc_GRK6 Catalytic do 99.5 3.3E-15 7.1E-20 151.7 4.6 134 409-547 2-150 (285)
137 KOG0193 Serine/threonine prote 99.5 1.2E-15 2.6E-20 163.2 1.2 129 409-546 394-535 (678)
138 cd05607 STKc_GRK7 Catalytic do 99.5 3.8E-15 8.2E-20 150.5 4.6 127 415-546 1-142 (277)
139 cd05580 STKc_PKA Catalytic dom 99.5 2.8E-15 6.2E-20 152.2 3.7 133 408-547 2-149 (290)
140 cd07878 STKc_p38beta_MAPK11 Ca 99.5 1.3E-15 2.8E-20 158.7 1.1 135 405-547 13-166 (343)
141 cd05105 PTKc_PDGFR_alpha Catal 99.5 3.5E-15 7.6E-20 159.7 4.3 140 408-547 38-285 (400)
142 cd08227 PK_STRAD_alpha Pseudok 99.5 3.5E-15 7.5E-20 154.5 4.1 126 411-541 2-143 (327)
143 cd07874 STKc_JNK3 Catalytic do 99.5 2.2E-15 4.8E-20 157.8 2.6 134 405-547 15-167 (355)
144 cd07861 STKc_CDK1_euk Catalyti 99.5 3.8E-15 8.1E-20 150.1 4.1 134 409-546 2-148 (285)
145 KOG3653 Transforming growth fa 99.5 1.3E-15 2.9E-20 158.8 0.7 130 409-547 212-364 (534)
146 KOG0599 Phosphorylase kinase g 99.5 4.4E-16 9.6E-21 152.6 -2.8 130 409-544 19-168 (411)
147 cd05113 PTKc_Btk_Bmx Catalytic 99.5 4.3E-15 9.3E-20 148.1 4.1 133 409-547 6-148 (256)
148 KOG4721 Serine/threonine prote 99.5 6.7E-15 1.5E-19 155.9 5.4 120 412-543 129-256 (904)
149 cd05084 PTKc_Fes Catalytic dom 99.5 5E-15 1.1E-19 146.6 4.2 128 413-546 1-141 (252)
150 KOG4236 Serine/threonine prote 99.5 3.8E-15 8.2E-20 156.6 3.3 121 405-530 560-691 (888)
151 KOG0986 G protein-coupled rece 99.5 1.5E-14 3.3E-19 150.2 7.5 136 409-549 187-337 (591)
152 KOG1095 Protein tyrosine kinas 99.5 5.3E-15 1.2E-19 169.2 4.6 140 409-549 694-852 (1025)
153 cd05103 PTKc_VEGFR2 Catalytic 99.5 2.2E-15 4.8E-20 157.4 1.3 140 408-547 8-227 (343)
154 cd06646 STKc_MAP4K5 Catalytic 99.5 3.1E-15 6.8E-20 149.4 2.3 132 408-546 10-153 (267)
155 PF00069 Pkinase: Protein kina 99.5 1.1E-15 2.4E-20 151.3 -1.1 131 409-546 1-145 (260)
156 cd05079 PTKc_Jak1_rpt2 Catalyt 99.5 5.4E-15 1.2E-19 149.5 3.8 135 407-547 4-157 (284)
157 cd05059 PTKc_Tec_like Catalyti 99.5 5.1E-15 1.1E-19 147.2 3.5 133 409-547 6-148 (256)
158 cd05072 PTKc_Lyn Catalytic dom 99.5 7.9E-15 1.7E-19 146.0 4.9 135 408-547 7-151 (261)
159 cd07875 STKc_JNK1 Catalytic do 99.5 4.8E-15 1E-19 155.9 3.3 133 406-547 23-174 (364)
160 cd07839 STKc_CDK5 Catalytic do 99.5 2.9E-15 6.4E-20 151.0 1.6 133 409-547 2-147 (284)
161 cd06625 STKc_MEKK3_like Cataly 99.5 6.1E-15 1.3E-19 146.6 3.8 131 409-546 4-151 (263)
162 cd05066 PTKc_EphR_A Catalytic 99.5 7.3E-15 1.6E-19 147.1 4.2 133 409-547 6-154 (267)
163 PTZ00283 serine/threonine prot 99.5 6.8E-15 1.5E-19 161.8 4.2 139 406-547 31-191 (496)
164 cd06631 STKc_YSK4 Catalytic do 99.5 8.5E-15 1.8E-19 146.1 4.4 132 409-547 2-150 (265)
165 cd07841 STKc_CDK7 Catalytic do 99.5 3.6E-15 7.9E-20 151.5 1.8 133 409-547 2-150 (298)
166 PRK13184 pknD serine/threonine 99.5 4.7E-15 1E-19 170.2 2.6 138 409-547 4-161 (932)
167 cd05054 PTKc_VEGFR Catalytic d 99.5 6E-15 1.3E-19 154.0 3.1 141 407-547 7-221 (337)
168 cd05101 PTKc_FGFR2 Catalytic d 99.5 1.2E-14 2.6E-19 148.6 5.1 142 406-547 14-185 (304)
169 KOG0587 Traf2- and Nck-interac 99.5 8.5E-15 1.8E-19 162.1 4.2 137 408-548 20-172 (953)
170 cd07870 STKc_PFTAIRE2 Catalyti 99.5 8E-15 1.7E-19 148.7 3.6 134 408-547 6-151 (291)
171 cd07836 STKc_Pho85 Catalytic d 99.5 8.5E-15 1.9E-19 147.4 3.7 135 409-547 2-148 (284)
172 cd05042 PTKc_Aatyk Catalytic d 99.5 1E-14 2.2E-19 146.0 4.2 133 413-547 1-148 (269)
173 cd05107 PTKc_PDGFR_beta Cataly 99.5 8.5E-15 1.8E-19 156.8 3.9 139 409-547 39-287 (401)
174 cd08228 STKc_Nek6 Catalytic do 99.5 1.2E-14 2.6E-19 145.0 4.6 135 409-546 4-153 (267)
175 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.5 1.3E-14 2.8E-19 146.4 4.9 134 408-547 5-156 (284)
176 cd07831 STKc_MOK Catalytic dom 99.5 9E-15 2E-19 146.9 3.5 133 409-547 1-147 (282)
177 cd06629 STKc_MAPKKK_Bck1_like 99.5 1.9E-14 4.2E-19 144.1 5.9 131 409-546 3-155 (272)
178 KOG1035 eIF-2alpha kinase GCN2 99.5 1.4E-14 3E-19 164.9 5.4 133 409-548 481-746 (1351)
179 cd05052 PTKc_Abl Catalytic dom 99.5 8.7E-15 1.9E-19 146.2 3.3 134 409-547 8-152 (263)
180 cd06630 STKc_MEKK1 Catalytic d 99.5 6.8E-15 1.5E-19 146.7 2.4 122 409-537 2-141 (268)
181 cd05088 PTKc_Tie2 Catalytic do 99.5 1.2E-14 2.5E-19 149.0 4.1 138 409-546 9-171 (303)
182 KOG0196 Tyrosine kinase, EPH ( 99.5 1.8E-14 3.9E-19 157.6 5.7 133 409-547 631-779 (996)
183 cd06645 STKc_MAP4K3 Catalytic 99.5 5.3E-15 1.1E-19 147.8 1.4 132 408-546 10-153 (267)
184 cd05578 STKc_Yank1 Catalytic d 99.5 5.9E-15 1.3E-19 146.6 1.7 132 409-547 2-148 (258)
185 cd05108 PTKc_EGFR Catalytic do 99.5 1.6E-14 3.4E-19 148.8 4.9 133 408-547 8-157 (316)
186 cd06652 STKc_MEKK2 Catalytic d 99.5 1.6E-14 3.5E-19 144.2 4.8 132 409-547 4-154 (265)
187 cd07847 STKc_CDKL1_4 Catalytic 99.5 8.3E-15 1.8E-19 147.5 2.7 133 408-547 2-148 (286)
188 cd05068 PTKc_Frk_like Catalyti 99.5 9.4E-15 2E-19 145.6 3.0 135 408-547 7-151 (261)
189 cd05098 PTKc_FGFR1 Catalytic d 99.5 1.9E-14 4.2E-19 147.4 5.4 139 408-546 19-187 (307)
190 cd08219 STKc_Nek3 Catalytic do 99.5 9.2E-15 2E-19 145.0 2.9 134 409-547 2-148 (255)
191 cd05613 STKc_MSK1_N N-terminal 99.5 1.4E-14 3E-19 146.8 4.2 132 409-546 2-152 (290)
192 PF07714 Pkinase_Tyr: Protein 99.5 6.5E-15 1.4E-19 147.4 1.7 132 411-547 3-151 (259)
193 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.5 1.4E-14 3.1E-19 146.2 4.2 131 409-547 6-155 (283)
194 cd07860 STKc_CDK2_3 Catalytic 99.5 8.7E-15 1.9E-19 147.5 2.4 133 409-546 2-147 (284)
195 cd07837 STKc_CdkB_plant Cataly 99.5 1.4E-14 3E-19 146.9 3.9 137 408-545 2-157 (295)
196 PTZ00024 cyclin-dependent prot 99.5 9.4E-15 2E-19 151.6 2.7 134 406-546 7-166 (335)
197 cd06637 STKc_TNIK Catalytic do 99.5 6.4E-15 1.4E-19 147.4 1.3 136 408-547 7-159 (272)
198 cd05090 PTKc_Ror1 Catalytic do 99.5 2E-14 4.2E-19 145.2 4.8 138 409-547 7-172 (283)
199 cd06644 STKc_STK10_LOK Catalyt 99.5 1.4E-14 3E-19 147.2 3.6 136 405-546 10-157 (292)
200 cd06656 STKc_PAK3 Catalytic do 99.5 1.2E-14 2.6E-19 148.5 3.1 133 407-547 19-163 (297)
201 cd08221 STKc_Nek9 Catalytic do 99.5 2.2E-14 4.7E-19 142.2 4.9 133 409-546 2-148 (256)
202 cd07868 STKc_CDK8 Catalytic do 99.5 1E-14 2.2E-19 149.9 2.6 135 412-547 6-160 (317)
203 cd07842 STKc_CDK8_like Catalyt 99.5 1.3E-14 2.7E-19 148.5 3.3 137 409-547 2-160 (316)
204 PHA03210 serine/threonine kina 99.5 4.9E-14 1.1E-18 155.2 8.0 139 407-547 148-315 (501)
205 cd05067 PTKc_Lck_Blk Catalytic 99.5 1.2E-14 2.6E-19 144.7 2.9 134 407-546 6-149 (260)
206 cd05148 PTKc_Srm_Brk Catalytic 99.5 1.1E-14 2.3E-19 144.8 2.5 132 409-545 8-150 (261)
207 cd07849 STKc_ERK1_2_like Catal 99.5 1.1E-14 2.4E-19 151.3 2.6 135 405-547 3-154 (336)
208 cd05035 PTKc_Axl_like Catalyti 99.5 2.1E-14 4.5E-19 143.4 4.4 138 409-547 1-161 (273)
209 cd06638 STKc_myosinIIIA Cataly 99.5 2.2E-14 4.8E-19 144.7 4.6 139 406-546 17-171 (286)
210 cd05100 PTKc_FGFR3 Catalytic d 99.5 2.6E-14 5.7E-19 148.4 5.3 142 406-547 11-182 (334)
211 cd08224 STKc_Nek6_Nek7 Catalyt 99.5 2.3E-14 5E-19 142.6 4.7 136 408-546 3-153 (267)
212 cd05046 PTK_CCK4 Pseudokinase 99.5 1.8E-14 3.8E-19 144.6 3.9 137 409-546 7-164 (275)
213 cd05065 PTKc_EphR_B Catalytic 99.5 2.9E-14 6.3E-19 142.7 5.4 131 409-545 6-152 (269)
214 cd05055 PTKc_PDGFR Catalytic d 99.5 1.5E-14 3.2E-19 148.3 3.2 137 407-547 35-189 (302)
215 cd05033 PTKc_EphR Catalytic do 99.5 1.6E-14 3.4E-19 144.4 3.3 132 409-546 6-153 (266)
216 cd05049 PTKc_Trk Catalytic dom 99.5 1.1E-14 2.5E-19 146.2 2.3 138 409-547 7-170 (280)
217 cd07850 STKc_JNK Catalytic dom 99.5 2.1E-14 4.5E-19 150.5 4.3 135 404-547 13-166 (353)
218 cd05089 PTKc_Tie1 Catalytic do 99.5 1.9E-14 4.1E-19 146.7 4.0 140 408-547 3-167 (297)
219 KOG0696 Serine/threonine prote 99.5 1.1E-14 2.4E-19 149.4 2.1 139 401-546 344-497 (683)
220 cd06611 STKc_SLK_like Catalyti 99.5 1.4E-14 3.1E-19 145.8 2.8 132 408-545 6-149 (280)
221 KOG2345 Serine/threonine prote 99.5 1.4E-14 3.1E-19 140.6 2.6 139 406-547 20-177 (302)
222 cd06628 STKc_MAPKKK_Byr2_like 99.5 2.5E-14 5.4E-19 142.7 4.5 131 409-546 2-153 (267)
223 cd00216 PQQ_DH Dehydrogenases 99.5 7.3E-14 1.6E-18 153.3 8.5 142 1-173 132-330 (488)
224 cd08529 STKc_FA2-like Catalyti 99.5 1.8E-14 4E-19 142.4 3.4 133 409-546 2-148 (256)
225 cd07855 STKc_ERK5 Catalytic do 99.5 9.8E-15 2.1E-19 151.6 1.3 135 405-546 3-154 (334)
226 cd06607 STKc_TAO Catalytic dom 99.5 1.9E-14 4.2E-19 147.4 3.5 135 406-546 14-162 (307)
227 cd05609 STKc_MAST Catalytic do 99.5 2.5E-14 5.4E-19 146.4 4.3 130 409-545 3-147 (305)
228 cd05053 PTKc_FGFR Catalytic do 99.5 3.1E-14 6.7E-19 144.3 4.8 140 408-547 13-180 (293)
229 cd05034 PTKc_Src_like Catalyti 99.5 1.8E-14 4E-19 143.2 3.1 134 407-545 6-149 (261)
230 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.5 3.9E-14 8.5E-19 141.2 5.4 120 413-538 1-139 (258)
231 cd05095 PTKc_DDR2 Catalytic do 99.5 2E-14 4.4E-19 146.3 3.4 138 408-546 6-177 (296)
232 KOG0669 Cyclin T-dependent kin 99.5 2.4E-15 5.2E-20 146.0 -3.2 133 409-547 19-172 (376)
233 cd06654 STKc_PAK1 Catalytic do 99.5 2.3E-14 5.1E-19 146.3 3.8 132 407-546 20-163 (296)
234 cd08229 STKc_Nek7 Catalytic do 99.5 2.4E-14 5.3E-19 142.8 3.7 135 409-546 4-153 (267)
235 cd05611 STKc_Rim15_like Cataly 99.5 2.7E-14 5.8E-19 142.1 4.0 127 413-545 2-143 (260)
236 cd07858 STKc_TEY_MAPK_plant Ca 99.5 1.6E-14 3.5E-19 150.3 2.4 136 405-547 3-156 (337)
237 cd05574 STKc_phototropin_like 99.5 1.7E-14 3.6E-19 148.2 2.4 133 408-545 2-149 (316)
238 cd07843 STKc_CDC2L1 Catalytic 99.5 1.5E-14 3.3E-19 146.7 2.1 132 409-546 7-153 (293)
239 cd05093 PTKc_TrkB Catalytic do 99.5 3.8E-14 8.2E-19 143.8 4.9 139 408-547 6-168 (288)
240 cd05099 PTKc_FGFR4 Catalytic d 99.5 3.4E-14 7.3E-19 146.2 4.5 140 408-547 13-182 (314)
241 cd07880 STKc_p38gamma_MAPK12 C 99.5 2.7E-14 5.9E-19 149.2 3.8 135 405-547 13-166 (343)
242 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.5 3.5E-14 7.6E-19 142.3 4.3 132 413-546 1-147 (269)
243 cd06651 STKc_MEKK3 Catalytic d 99.5 4.4E-14 9.5E-19 141.3 5.0 132 409-547 4-154 (266)
244 cd07867 STKc_CDC2L6 Catalytic 99.5 2.7E-14 5.8E-19 146.4 3.5 135 412-547 6-160 (317)
245 cd05075 PTKc_Axl Catalytic dom 99.5 3.6E-14 7.9E-19 141.9 4.4 137 410-547 2-160 (272)
246 cd07865 STKc_CDK9 Catalytic do 99.5 1.8E-14 3.8E-19 146.8 2.1 135 405-546 11-166 (310)
247 cd05048 PTKc_Ror Catalytic Dom 99.5 3.1E-14 6.8E-19 143.4 3.9 138 409-547 7-172 (283)
248 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.5 3.2E-14 7E-19 143.6 3.8 117 414-536 2-154 (274)
249 cd05032 PTKc_InsR_like Catalyt 99.5 3.2E-14 7E-19 142.7 3.7 139 408-547 7-167 (277)
250 cd05071 PTKc_Src Catalytic dom 99.4 3E-14 6.6E-19 142.5 3.4 133 408-546 7-149 (262)
251 cd05085 PTKc_Fer Catalytic dom 99.4 3.4E-14 7.3E-19 140.3 3.5 127 413-545 1-139 (250)
252 cd07832 STKc_CCRK Catalytic do 99.4 2.6E-14 5.6E-19 143.9 2.8 131 409-545 2-145 (286)
253 cd07856 STKc_Sty1_Hog1 Catalyt 99.4 3.6E-14 7.8E-19 147.4 3.9 135 404-546 7-155 (328)
254 cd05062 PTKc_IGF-1R Catalytic 99.4 3.8E-14 8.1E-19 142.7 3.8 141 406-547 5-167 (277)
255 cd05070 PTKc_Fyn_Yrk Catalytic 99.4 2.3E-14 4.9E-19 142.8 2.0 132 408-545 7-148 (260)
256 cd07833 STKc_CDKL Catalytic do 99.4 5.5E-14 1.2E-18 141.6 4.8 133 408-546 2-147 (288)
257 cd06641 STKc_MST3 Catalytic do 99.4 4.7E-14 1E-18 142.1 4.3 131 408-546 5-148 (277)
258 cd07846 STKc_CDKL2_3 Catalytic 99.4 2.1E-14 4.6E-19 144.7 1.8 132 408-546 2-147 (286)
259 cd06642 STKc_STK25-YSK1 Cataly 99.4 1.5E-14 3.3E-19 145.5 0.7 133 407-547 4-149 (277)
260 cd05047 PTKc_Tie Catalytic dom 99.4 5.1E-14 1.1E-18 141.3 4.5 135 413-547 1-160 (270)
261 cd06613 STKc_MAP4K3_like Catal 99.4 3E-14 6.5E-19 141.3 2.8 133 408-546 4-148 (262)
262 cd05633 STKc_GRK3 Catalytic do 99.4 4.5E-14 9.8E-19 142.9 4.1 128 414-547 1-145 (279)
263 KOG4278 Protein tyrosine kinas 99.4 3E-14 6.5E-19 152.1 2.6 134 409-547 269-413 (1157)
264 cd07864 STKc_CDK12 Catalytic d 99.4 2.5E-14 5.4E-19 145.5 1.9 134 408-547 8-164 (302)
265 PLN00009 cyclin-dependent kina 99.4 6.8E-14 1.5E-18 142.1 5.1 132 409-545 4-149 (294)
266 cd05097 PTKc_DDR_like Catalyti 99.4 3.6E-14 7.7E-19 144.5 3.1 138 408-546 6-176 (295)
267 cd05057 PTKc_EGFR_like Catalyt 99.4 5.5E-14 1.2E-18 141.6 4.3 134 407-547 7-157 (279)
268 cd05069 PTKc_Yes Catalytic dom 99.4 5.7E-14 1.2E-18 140.0 4.4 134 408-547 7-150 (260)
269 KOG0579 Ste20-like serine/thre 99.4 1.2E-14 2.7E-19 155.2 -0.4 132 407-544 32-175 (1187)
270 cd06655 STKc_PAK2 Catalytic do 99.4 3.9E-14 8.5E-19 144.7 3.3 133 407-547 19-163 (296)
271 cd06643 STKc_SLK Catalytic dom 99.4 4.2E-14 9.2E-19 142.7 3.5 133 409-547 7-151 (282)
272 cd05111 PTK_HER3 Pseudokinase 99.4 5.3E-14 1.1E-18 142.2 4.0 132 409-547 9-157 (279)
273 cd06636 STKc_MAP4K4_6 Catalyti 99.4 4.7E-14 1E-18 142.2 3.6 135 409-547 18-169 (282)
274 cd08218 STKc_Nek1 Catalytic do 99.4 8.4E-14 1.8E-18 138.0 5.3 132 409-545 2-147 (256)
275 cd05581 STKc_PDK1 Catalytic do 99.4 3.3E-14 7.1E-19 142.3 2.3 134 408-547 2-150 (280)
276 cd05061 PTKc_InsR Catalytic do 99.4 5.4E-14 1.2E-18 142.6 3.9 140 407-547 6-167 (288)
277 cd07852 STKc_MAPK15 Catalytic 99.4 3.3E-14 7.2E-19 147.7 2.4 136 405-547 5-155 (337)
278 cd00216 PQQ_DH Dehydrogenases 99.4 1.6E-13 3.4E-18 150.7 7.8 133 1-173 41-194 (488)
279 cd05037 PTK_Jak_rpt1 Pseudokin 99.4 6.1E-14 1.3E-18 138.9 4.2 117 413-536 1-138 (259)
280 cd05039 PTKc_Csk_like Catalyti 99.4 4.4E-14 9.6E-19 140.2 3.1 133 408-546 7-149 (256)
281 cd06619 PKc_MKK5 Catalytic dom 99.4 4.5E-14 9.8E-19 142.5 3.2 128 409-547 3-143 (279)
282 cd05112 PTKc_Itk Catalytic dom 99.4 5.1E-14 1.1E-18 139.6 3.5 132 409-546 6-147 (256)
283 cd06653 STKc_MEKK3_like_1 Cata 99.4 6.5E-14 1.4E-18 139.9 4.2 132 409-547 4-154 (264)
284 cd06635 STKc_TAO1 Catalytic do 99.4 4.8E-14 1E-18 145.4 3.3 134 407-546 25-172 (317)
285 cd06632 STKc_MEKK1_plant Catal 99.4 2.9E-14 6.3E-19 141.0 1.6 131 409-546 2-149 (258)
286 PHA02988 hypothetical protein; 99.4 5E-14 1.1E-18 143.2 3.3 127 413-547 26-171 (283)
287 cd05094 PTKc_TrkC Catalytic do 99.4 6.5E-14 1.4E-18 142.3 4.1 138 409-547 7-171 (291)
288 cd06622 PKc_MAPKK_PBS2_like Ca 99.4 2.6E-14 5.6E-19 144.4 1.1 134 409-546 3-150 (286)
289 cd08223 STKc_Nek4 Catalytic do 99.4 6.9E-14 1.5E-18 138.5 4.1 131 409-544 2-147 (257)
290 cd05045 PTKc_RET Catalytic dom 99.4 5.6E-14 1.2E-18 142.5 3.5 138 409-547 2-175 (290)
291 cd06620 PKc_MAPKK_Byr1_like Ca 99.4 3.5E-14 7.6E-19 143.6 2.0 131 409-546 7-151 (284)
292 TIGR03300 assembly_YfgL outer 99.4 2.1E-13 4.5E-18 144.5 7.9 136 29-199 186-335 (377)
293 cd05116 PTKc_Syk Catalytic dom 99.4 7E-14 1.5E-18 139.1 4.0 125 414-546 2-142 (257)
294 cd05063 PTKc_EphR_A2 Catalytic 99.4 7.7E-14 1.7E-18 139.4 4.4 133 408-546 6-154 (268)
295 cd07845 STKc_CDK10 Catalytic d 99.4 3.6E-14 7.8E-19 145.4 2.0 132 409-546 9-155 (309)
296 cd05606 STKc_beta_ARK Catalyti 99.4 6.5E-14 1.4E-18 141.6 3.9 128 414-547 1-145 (278)
297 cd07830 STKc_MAK_like Catalyti 99.4 3.1E-14 6.7E-19 143.2 1.5 135 409-547 1-147 (283)
298 cd05051 PTKc_DDR Catalytic dom 99.4 4.8E-14 1E-18 143.0 2.9 138 409-547 7-178 (296)
299 cd05036 PTKc_ALK_LTK Catalytic 99.4 1.1E-13 2.5E-18 139.3 5.5 128 408-536 7-153 (277)
300 cd05073 PTKc_Hck Catalytic dom 99.4 6.8E-14 1.5E-18 139.5 3.9 134 406-545 5-148 (260)
301 cd05086 PTKc_Aatyk2 Catalytic 99.4 7.4E-14 1.6E-18 140.1 4.0 130 414-546 2-146 (268)
302 cd05083 PTKc_Chk Catalytic dom 99.4 6.6E-14 1.4E-18 138.9 3.6 131 409-546 8-147 (254)
303 cd08226 PK_STRAD_beta Pseudoki 99.4 5.6E-14 1.2E-18 145.6 3.1 124 413-541 4-143 (328)
304 cd06612 STKc_MST1_2 Catalytic 99.4 6.3E-14 1.4E-18 138.5 3.4 133 408-546 4-146 (256)
305 KOG0201 Serine/threonine prote 99.4 6.2E-15 1.4E-19 152.8 -3.9 132 407-545 13-157 (467)
306 cd00192 PTKc Catalytic domain 99.4 7.4E-14 1.6E-18 137.8 3.8 134 413-547 1-153 (262)
307 KOG0695 Serine/threonine prote 99.4 8.3E-14 1.8E-18 139.8 4.0 131 409-545 252-397 (593)
308 cd07857 STKc_MPK1 Catalytic do 99.4 5.6E-14 1.2E-18 145.8 3.0 133 409-547 2-153 (332)
309 cd05109 PTKc_HER2 Catalytic do 99.4 7.6E-14 1.6E-18 140.6 3.8 132 408-546 8-156 (279)
310 cd05577 STKc_GRK Catalytic dom 99.4 7.7E-14 1.7E-18 140.5 3.8 127 415-546 1-142 (277)
311 cd06640 STKc_MST4 Catalytic do 99.4 5.4E-14 1.2E-18 141.7 2.6 131 408-546 5-148 (277)
312 cd05115 PTKc_Zap-70 Catalytic 99.4 8.6E-14 1.9E-18 138.9 4.1 126 414-546 2-142 (257)
313 cd05050 PTKc_Musk Catalytic do 99.4 6.9E-14 1.5E-18 141.6 3.3 138 408-546 6-177 (288)
314 smart00219 TyrKc Tyrosine kina 99.4 6.1E-14 1.3E-18 138.4 2.8 133 410-547 2-151 (258)
315 cd06623 PKc_MAPKK_plant_like C 99.4 8.6E-14 1.9E-18 138.0 3.9 131 409-546 3-147 (264)
316 cd07877 STKc_p38alpha_MAPK14 C 99.4 6.5E-14 1.4E-18 146.4 3.1 136 404-547 14-168 (345)
317 cd06626 STKc_MEKK4 Catalytic d 99.4 4.3E-14 9.3E-19 140.4 1.6 131 409-546 2-146 (264)
318 PTZ00284 protein kinase; Provi 99.4 7.8E-14 1.7E-18 152.1 3.7 126 406-537 128-270 (467)
319 cd05077 PTK_Jak1_rpt1 Pseudoki 99.4 1.3E-13 2.8E-18 138.2 4.9 119 413-537 1-143 (262)
320 cd07835 STKc_CDK1_like Catalyt 99.4 3.8E-14 8.2E-19 142.8 1.1 133 409-546 1-146 (283)
321 cd05082 PTKc_Csk Catalytic dom 99.4 1.1E-13 2.3E-18 137.6 4.2 133 409-547 8-150 (256)
322 cd06658 STKc_PAK5 Catalytic do 99.4 2.2E-14 4.7E-19 146.3 -0.8 131 408-546 23-165 (292)
323 cd07840 STKc_CDK9_like Catalyt 99.4 6.1E-14 1.3E-18 140.9 2.4 133 409-547 1-148 (287)
324 cd06659 STKc_PAK6 Catalytic do 99.4 3E-14 6.5E-19 145.6 0.1 132 408-547 22-165 (297)
325 cd05038 PTKc_Jak_rpt2 Catalyti 99.4 6.1E-14 1.3E-18 140.8 2.2 133 408-546 5-156 (284)
326 cd05044 PTKc_c-ros Catalytic d 99.4 2.2E-13 4.8E-18 136.0 6.2 123 413-536 1-143 (269)
327 cd06605 PKc_MAPKK Catalytic do 99.4 5.6E-14 1.2E-18 139.8 1.9 132 409-546 3-148 (265)
328 PTZ00266 NIMA-related protein 99.4 1.4E-13 2.9E-18 159.1 5.2 123 404-530 11-152 (1021)
329 cd05041 PTKc_Fes_like Catalyti 99.4 1.3E-13 2.8E-18 136.3 4.4 128 413-546 1-140 (251)
330 cd05092 PTKc_TrkA Catalytic do 99.4 7.7E-14 1.7E-18 140.9 2.8 139 408-547 6-170 (280)
331 PHA03390 pk1 serine/threonine- 99.4 9.5E-14 2.1E-18 139.6 3.4 128 409-544 16-155 (267)
332 cd06639 STKc_myosinIIIB Cataly 99.4 1.3E-13 2.8E-18 139.7 4.4 138 407-546 22-175 (291)
333 cd06624 STKc_ASK Catalytic dom 99.4 1.1E-13 2.3E-18 138.5 3.7 129 412-546 13-156 (268)
334 TIGR03074 PQQ_membr_DH membran 99.4 2.6E-13 5.7E-18 154.4 7.1 148 1-176 166-358 (764)
335 cd06609 STKc_MST3_like Catalyt 99.4 7.6E-14 1.6E-18 140.1 2.2 132 408-547 2-146 (274)
336 cd05583 STKc_MSK_N N-terminal 99.4 8.2E-14 1.8E-18 141.0 2.4 133 409-547 2-153 (288)
337 cd06610 STKc_OSR1_SPAK Catalyt 99.4 1.4E-13 2.9E-18 136.9 4.0 134 408-545 2-148 (267)
338 KOG0199 ACK and related non-re 99.4 2.9E-14 6.2E-19 154.2 -1.0 133 409-548 112-261 (1039)
339 cd06616 PKc_MKK4 Catalytic dom 99.4 1.4E-13 3.1E-18 139.1 4.0 138 409-547 6-156 (288)
340 cd05043 PTK_Ryk Pseudokinase d 99.4 1.6E-13 3.6E-18 138.1 4.3 140 407-547 6-165 (280)
341 cd06647 STKc_PAK_I Catalytic d 99.4 1.1E-13 2.4E-18 141.1 3.0 131 407-545 19-161 (293)
342 cd05091 PTKc_Ror2 Catalytic do 99.4 1.4E-13 3.1E-18 138.8 3.6 138 409-547 7-172 (283)
343 cd05572 STKc_cGK_PKG Catalytic 99.4 1.2E-13 2.5E-18 137.6 3.0 125 415-546 1-140 (262)
344 PLN00113 leucine-rich repeat r 99.4 7.7E-14 1.7E-18 165.0 1.9 121 409-540 692-824 (968)
345 cd06608 STKc_myosinIII_like Ca 99.4 8.9E-14 1.9E-18 138.6 2.0 137 407-545 6-159 (275)
346 cd05056 PTKc_FAK Catalytic dom 99.4 2.2E-13 4.7E-18 136.5 4.8 131 409-546 8-154 (270)
347 KOG0596 Dual specificity; seri 99.4 3.9E-13 8.5E-18 142.7 6.7 137 406-547 360-507 (677)
348 cd08220 STKc_Nek8 Catalytic do 99.4 1.1E-13 2.5E-18 136.7 2.5 123 409-536 2-138 (256)
349 cd07866 STKc_BUR1 Catalytic do 99.4 7.9E-14 1.7E-18 142.1 1.3 134 408-547 9-163 (311)
350 cd05060 PTKc_Syk_like Catalyti 99.4 2.4E-13 5.1E-18 135.2 4.7 127 413-547 1-143 (257)
351 cd08528 STKc_Nek10 Catalytic d 99.4 3.7E-13 8.1E-18 134.5 6.0 136 409-546 2-161 (269)
352 cd06627 STKc_Cdc7_like Catalyt 99.4 1.5E-13 3.3E-18 135.2 3.1 131 409-546 2-146 (254)
353 cd07834 STKc_MAPK Catalytic do 99.4 9.7E-14 2.1E-18 143.4 1.7 130 409-545 2-149 (330)
354 cd06614 STKc_PAK Catalytic dom 99.4 1.9E-13 4.2E-18 138.2 3.8 135 405-545 17-162 (286)
355 cd05579 STKc_MAST_like Catalyt 99.4 8.4E-14 1.8E-18 137.8 1.1 124 415-545 1-139 (265)
356 PRK09188 serine/threonine prot 99.4 1.1E-13 2.4E-18 145.7 2.0 126 404-547 15-160 (365)
357 cd07838 STKc_CDK4_6_like Catal 99.4 1.9E-13 4.2E-18 137.4 3.5 133 409-545 1-153 (287)
358 TIGR03075 PQQ_enz_alc_DH PQQ-d 99.4 4.3E-13 9.2E-18 148.2 6.5 133 1-174 49-201 (527)
359 KOG0614 cGMP-dependent protein 99.4 8.5E-14 1.8E-18 146.2 0.8 137 403-547 417-568 (732)
360 cd08217 STKc_Nek2 Catalytic do 99.4 2.3E-13 5.1E-18 134.6 3.8 136 409-547 2-158 (265)
361 KOG4279 Serine/threonine prote 99.4 8.9E-14 1.9E-18 150.2 0.8 111 414-530 582-702 (1226)
362 KOG1290 Serine/threonine prote 99.4 4.5E-13 9.7E-18 140.5 6.0 139 388-530 54-215 (590)
363 cd05110 PTKc_HER4 Catalytic do 99.4 2.7E-13 5.9E-18 138.8 4.2 132 409-547 9-157 (303)
364 cd07851 STKc_p38 Catalytic dom 99.4 1.3E-13 2.9E-18 143.9 1.9 135 405-547 13-166 (343)
365 cd08225 STKc_Nek5 Catalytic do 99.4 2.1E-13 4.5E-18 134.9 3.2 124 409-537 2-139 (257)
366 cd06917 STKc_NAK1_like Catalyt 99.4 1.8E-13 4E-18 137.4 2.8 130 409-545 3-147 (277)
367 cd06633 STKc_TAO3 Catalytic do 99.4 1.4E-13 3E-18 141.8 1.9 135 405-545 19-167 (313)
368 cd06606 STKc_MAPKKK Catalytic 99.4 2.4E-13 5.2E-18 133.5 3.4 130 409-545 2-147 (260)
369 cd05576 STKc_RPK118_like Catal 99.4 2.2E-13 4.7E-18 134.5 3.0 120 418-546 4-132 (237)
370 cd06618 PKc_MKK7 Catalytic dom 99.4 1.6E-13 3.5E-18 139.7 2.0 134 409-547 17-163 (296)
371 cd06621 PKc_MAPKK_Pek1_like Ca 99.4 2.2E-13 4.9E-18 138.0 3.1 134 409-545 3-151 (287)
372 KOG0584 Serine/threonine prote 99.4 1.1E-12 2.3E-17 141.5 8.0 134 406-546 39-193 (632)
373 cd05118 STKc_CMGC Catalytic do 99.4 1.1E-13 2.5E-18 138.8 0.6 130 409-544 1-143 (283)
374 cd07854 STKc_MAPK4_6 Catalytic 99.4 1.3E-13 2.9E-18 143.8 0.9 132 406-545 4-161 (342)
375 KOG4645 MAPKKK (MAP kinase kin 99.4 1.1E-13 2.4E-18 158.5 0.1 136 402-544 1230-1379(1509)
376 cd05074 PTKc_Tyro3 Catalytic d 99.4 3.1E-13 6.8E-18 135.2 3.3 137 409-546 1-160 (273)
377 cd05040 PTKc_Ack_like Catalyti 99.3 3.8E-13 8.3E-18 133.4 3.5 129 413-547 1-145 (257)
378 cd05058 PTKc_Met_Ron Catalytic 99.3 3.7E-13 8.1E-18 133.8 3.3 129 413-547 1-146 (262)
379 cd05122 PKc_STE Catalytic doma 99.3 5.5E-13 1.2E-17 130.4 4.3 133 409-547 2-146 (253)
380 KOG4257 Focal adhesion tyrosin 99.3 3.4E-13 7.3E-18 144.5 2.9 132 409-547 391-539 (974)
381 cd07829 STKc_CDK_like Catalyti 99.3 1.7E-13 3.8E-18 137.4 0.4 132 409-546 1-145 (282)
382 cd08215 STKc_Nek Catalytic dom 99.3 4.7E-13 1E-17 131.7 3.4 134 409-545 2-149 (258)
383 cd06657 STKc_PAK4 Catalytic do 99.3 3.1E-13 6.7E-18 137.9 2.2 130 409-546 22-163 (292)
384 cd06648 STKc_PAK_II Catalytic 99.3 5.4E-13 1.2E-17 135.3 3.7 130 409-546 21-162 (285)
385 KOG0576 Mitogen-activated prot 99.3 7.8E-14 1.7E-18 150.5 -2.5 135 407-548 15-161 (829)
386 cd08216 PK_STRAD Pseudokinase 99.3 3.9E-13 8.4E-18 137.8 2.0 129 411-545 6-147 (314)
387 cd07879 STKc_p38delta_MAPK13 C 99.3 3.3E-13 7.2E-18 140.8 1.4 133 406-547 14-165 (342)
388 cd05147 RIO1_euk RIO kinase fa 99.3 1.1E-13 2.4E-18 133.2 -2.1 123 412-544 2-162 (190)
389 cd06634 STKc_TAO2 Catalytic do 99.3 4.6E-13 9.9E-18 137.5 1.9 133 407-545 15-161 (308)
390 KOG0668 Casein kinase II, alph 99.3 1.6E-13 3.6E-18 131.8 -1.4 113 409-530 40-159 (338)
391 cd08530 STKc_CNK2-like Catalyt 99.3 4.5E-13 9.7E-18 132.3 1.6 133 409-544 2-148 (256)
392 KOG1025 Epidermal growth facto 99.3 7.9E-14 1.7E-18 153.1 -4.1 132 409-547 698-846 (1177)
393 PRK10345 hypothetical protein; 99.3 6.1E-13 1.3E-17 130.0 2.1 122 412-544 7-152 (210)
394 PHA02882 putative serine/threo 99.3 2.1E-12 4.6E-17 131.8 4.8 137 404-547 9-174 (294)
395 cd05123 STKc_AGC Catalytic dom 99.3 5.9E-13 1.3E-17 131.1 0.6 125 415-546 1-140 (250)
396 KOG0664 Nemo-like MAPK-related 99.3 3.1E-13 6.6E-18 132.7 -2.0 132 409-547 55-204 (449)
397 KOG1151 Tousled-like protein k 99.3 8E-13 1.7E-17 136.9 1.0 130 401-537 457-607 (775)
398 COG1520 FOG: WD40-like repeat 99.3 8.9E-12 1.9E-16 132.0 8.7 136 1-174 45-183 (370)
399 cd08222 STKc_Nek11 Catalytic d 99.3 1.1E-12 2.3E-17 130.6 1.4 119 409-530 2-133 (260)
400 cd05145 RIO1_like RIO kinase f 99.3 6.6E-13 1.4E-17 127.5 -0.1 125 412-547 2-165 (190)
401 KOG0984 Mitogen-activated prot 99.2 2.6E-12 5.7E-17 122.0 0.8 134 409-544 48-194 (282)
402 KOG0671 LAMMER dual specificit 99.2 3.4E-11 7.3E-16 123.5 7.0 123 404-530 86-219 (415)
403 KOG0200 Fibroblast/platelet-de 99.2 7.6E-12 1.6E-16 140.8 2.3 141 409-549 298-468 (609)
404 smart00221 STYKc Protein kinas 99.2 8.9E-12 1.9E-16 120.0 2.4 131 409-546 1-145 (225)
405 PLN03224 probable serine/threo 99.2 7.9E-12 1.7E-16 137.0 1.9 139 409-548 147-358 (507)
406 TIGR03075 PQQ_enz_alc_DH PQQ-d 99.2 4.9E-11 1.1E-15 131.9 7.7 165 1-175 91-292 (527)
407 KOG1345 Serine/threonine kinas 99.2 4E-12 8.6E-17 125.1 -1.0 124 400-530 17-148 (378)
408 COG1520 FOG: WD40-like repeat 99.1 3.5E-11 7.5E-16 127.5 6.0 118 29-173 106-228 (370)
409 PF13360 PQQ_2: PQQ-like domai 99.1 1.4E-11 3.1E-16 121.1 2.7 116 32-174 35-152 (238)
410 TIGR03074 PQQ_membr_DH membran 99.1 6.1E-11 1.3E-15 135.2 7.4 160 1-174 216-434 (764)
411 cd00180 PKc Catalytic domain o 99.1 2.8E-11 6E-16 113.9 3.2 127 415-547 1-141 (215)
412 KOG1006 Mitogen-activated prot 99.1 1.6E-12 3.4E-17 127.6 -5.4 135 409-544 66-213 (361)
413 KOG0665 Jun-N-terminal kinase 99.1 1.9E-11 4.2E-16 122.7 2.0 134 404-547 14-166 (369)
414 KOG0603 Ribosomal protein S6 k 99.1 2.6E-11 5.6E-16 131.3 2.2 128 406-541 321-458 (612)
415 KOG1163 Casein kinase (serine/ 99.1 2E-11 4.3E-16 118.5 1.1 122 403-530 12-138 (341)
416 PLN03225 Serine/threonine-prot 99.1 2.3E-11 5.1E-16 135.7 0.0 137 409-548 134-305 (566)
417 KOG1167 Serine/threonine prote 99.1 2.3E-11 5.1E-16 126.0 -0.3 119 403-530 32-159 (418)
418 KOG1165 Casein kinase (serine/ 99.0 1.1E-10 2.3E-15 117.9 2.8 135 401-540 22-165 (449)
419 KOG4649 PQQ (pyrrolo-quinoline 99.0 2.8E-10 6.1E-15 111.0 5.4 156 1-196 1-157 (354)
420 smart00090 RIO RIO-like kinase 99.0 4.9E-11 1.1E-15 118.8 -0.1 128 406-545 27-194 (237)
421 PRK10359 lipopolysaccharide co 99.0 8E-11 1.7E-15 116.3 1.2 120 404-536 28-172 (232)
422 PRK12274 serine/threonine prot 99.0 1.6E-10 3.5E-15 112.3 3.1 122 410-546 5-139 (218)
423 KOG0983 Mitogen-activated prot 98.9 7.8E-11 1.7E-15 116.2 -1.6 131 409-544 94-237 (391)
424 smart00220 S_TKc Serine/Threon 98.9 2.2E-10 4.7E-15 111.0 0.8 121 419-546 1-134 (244)
425 KOG1024 Receptor-like protein 98.9 1.5E-09 3.3E-14 111.6 6.1 141 408-549 285-446 (563)
426 PRK14879 serine/threonine prot 98.9 3.8E-10 8.3E-15 109.3 1.5 120 413-545 2-140 (211)
427 KOG1164 Casein kinase (serine/ 98.9 6.8E-10 1.5E-14 115.5 2.6 119 408-530 19-149 (322)
428 KOG0670 U4/U6-associated splic 98.9 2.4E-10 5.2E-15 120.9 -1.1 130 403-535 428-572 (752)
429 PF13360 PQQ_2: PQQ-like domai 98.9 9.9E-10 2.2E-14 107.9 2.9 100 41-171 1-103 (238)
430 TIGR03724 arch_bud32 Kae1-asso 98.8 7.1E-10 1.5E-14 106.5 0.7 117 414-546 1-136 (199)
431 PRK09605 bifunctional UGMP fam 98.8 1.5E-09 3.4E-14 120.6 3.4 122 409-547 335-475 (535)
432 cd05144 RIO2_C RIO kinase fami 98.8 4.4E-10 9.5E-15 108.4 -1.5 122 409-547 17-173 (198)
433 KOG4649 PQQ (pyrrolo-quinoline 98.8 5.6E-09 1.2E-13 102.1 5.9 141 1-184 45-190 (354)
434 KOG1166 Mitotic checkpoint ser 98.7 1.7E-09 3.7E-14 124.5 -1.1 127 398-530 689-821 (974)
435 cd05119 RIO RIO kinase family, 98.6 7.6E-09 1.6E-13 98.2 -0.3 124 412-548 2-163 (187)
436 COG0515 SPS1 Serine/threonine 98.6 3.6E-08 7.9E-13 97.6 4.5 131 409-545 2-148 (384)
437 PRK01723 3-deoxy-D-manno-octul 98.6 1.3E-08 2.9E-13 101.5 0.4 93 445-546 85-189 (239)
438 COG4993 Gcd Glucose dehydrogen 98.5 1.6E-07 3.5E-12 101.3 7.1 157 2-180 187-374 (773)
439 cd05120 APH_ChoK_like Aminogly 98.4 5.9E-08 1.3E-12 87.0 1.1 124 412-546 3-136 (155)
440 TIGR01982 UbiB 2-polyprenylphe 98.3 1.6E-07 3.5E-12 101.8 1.0 131 412-547 122-305 (437)
441 PF13570 PQQ_3: PQQ-like domai 98.2 4.1E-07 9E-12 64.8 0.6 40 52-92 1-40 (40)
442 PLN00181 protein SPA1-RELATED; 98.1 4.6E-07 1E-11 105.5 -1.4 73 459-536 30-117 (793)
443 KOG0603 Ribosomal protein S6 k 98.1 5.2E-07 1.1E-11 98.4 -1.0 128 414-547 1-145 (612)
444 PRK04750 ubiB putative ubiquin 98.1 3.9E-07 8.4E-12 100.7 -2.6 134 409-547 122-312 (537)
445 KOG0590 Checkpoint kinase and 98.0 1.3E-06 2.9E-11 98.1 0.8 122 411-539 322-460 (601)
446 PF01011 PQQ: PQQ enzyme repea 98.0 5.3E-06 1.1E-10 58.4 3.1 30 74-103 1-30 (38)
447 smart00564 PQQ beta-propeller 97.9 7.7E-06 1.7E-10 55.3 3.1 32 68-99 1-32 (33)
448 COG4993 Gcd Glucose dehydrogen 97.9 2.2E-05 4.8E-10 85.2 6.6 106 55-177 187-303 (773)
449 KOG4158 BRPK/PTEN-induced prot 97.8 7E-06 1.5E-10 85.3 2.1 80 458-544 273-388 (598)
450 cd05146 RIO3_euk RIO kinase fa 97.6 1.7E-05 3.6E-10 76.9 0.7 72 448-530 74-152 (197)
451 PF01011 PQQ: PQQ enzyme repea 97.6 5.5E-05 1.2E-09 53.2 3.1 33 145-177 1-33 (38)
452 KOG0195 Integrin-linked kinase 97.5 3.6E-05 7.9E-10 76.5 1.6 108 409-522 192-308 (448)
453 cd05151 ChoK Choline Kinase (C 97.5 2.2E-05 4.7E-10 72.9 -0.3 117 413-544 4-132 (170)
454 KOG1240 Protein kinase contain 97.3 6.6E-06 1.4E-10 94.6 -7.3 113 409-530 25-147 (1431)
455 KOG3087 Serine/threonine prote 97.2 0.00022 4.8E-09 67.8 3.4 122 411-540 11-154 (229)
456 smart00564 PQQ beta-propeller 97.2 0.00026 5.5E-09 47.7 2.5 27 145-171 7-33 (33)
457 PF13570 PQQ_3: PQQ-like domai 97.2 0.00011 2.4E-09 52.1 0.6 36 1-50 3-38 (40)
458 KOG0590 Checkpoint kinase and 97.1 7E-05 1.5E-09 84.4 -1.5 130 409-544 22-170 (601)
459 PF14531 Kinase-like: Kinase-l 97.0 0.00013 2.8E-09 74.6 -1.3 133 409-542 14-188 (288)
460 KOG1243 Protein kinase [Genera 96.8 0.00019 4.2E-09 79.4 -1.3 88 447-545 56-151 (690)
461 PRK15123 lipopolysaccharide co 96.6 0.0015 3.3E-08 66.4 3.0 85 446-534 74-173 (268)
462 COG3642 Mn2+-dependent serine/ 96.6 0.0013 2.8E-08 62.8 2.2 116 414-545 3-137 (204)
463 KOG0601 Cyclin-dependent kinas 96.5 0.0015 3.3E-08 71.5 3.1 125 401-530 108-249 (524)
464 KOG0601 Cyclin-dependent kinas 96.5 0.001 2.2E-08 72.8 1.7 116 409-530 267-393 (524)
465 KOG0606 Microtubule-associated 96.5 0.0013 2.8E-08 76.2 2.2 104 407-547 83-191 (1205)
466 PF06293 Kdo: Lipopolysacchari 96.3 0.0017 3.6E-08 63.3 1.5 93 446-544 57-164 (206)
467 PF01163 RIO1: RIO1 family; I 96.1 0.0017 3.6E-08 62.6 0.4 87 446-544 54-151 (188)
468 cd05154 ACAD10_11_like Acyl-Co 95.8 0.0043 9.2E-08 59.8 1.5 103 413-522 4-118 (223)
469 PRK09902 hypothetical protein; 95.5 0.0051 1.1E-07 60.2 1.0 98 444-545 63-174 (216)
470 KOG3741 Poly(A) ribonuclease s 95.5 0.0071 1.5E-07 65.6 2.0 105 423-527 292-417 (655)
471 COG0478 RIO-like serine/threon 95.4 0.0077 1.7E-07 60.8 1.7 119 409-539 93-242 (304)
472 COG0661 AarF Predicted unusual 94.6 0.011 2.4E-07 65.4 0.5 139 404-548 120-314 (517)
473 COG1718 RIO1 Serine/threonine 94.5 0.0076 1.6E-07 60.2 -0.9 117 413-541 54-208 (268)
474 KOG1023 Natriuretic peptide re 93.7 0.031 6.7E-07 61.2 1.7 69 457-530 3-76 (484)
475 KOG1266 Protein kinase [Signal 93.5 0.02 4.4E-07 59.0 -0.1 76 452-530 119-205 (458)
476 PF05935 Arylsulfotrans: Aryls 93.0 0.11 2.3E-06 57.4 4.6 122 27-177 108-246 (477)
477 TIGR03866 PQQ_ABC_repeats PQQ- 92.7 0.22 4.8E-06 49.6 6.0 106 35-171 3-112 (300)
478 PF10707 YrbL-PhoP_reg: PhoP r 91.8 0.073 1.6E-06 51.7 1.3 79 444-530 55-145 (199)
479 KOG0296 Angio-associated migra 91.4 0.4 8.6E-06 49.9 6.0 118 36-184 121-241 (399)
480 KOG0278 Serine/threonine kinas 91.3 0.87 1.9E-05 45.3 7.9 133 2-182 169-308 (334)
481 KOG1235 Predicted unusual prot 91.2 0.062 1.3E-06 59.6 -0.0 127 413-548 167-354 (538)
482 PF14269 Arylsulfotran_2: Aryl 90.9 0.24 5.3E-06 51.2 4.1 86 81-170 94-181 (299)
483 cd00200 WD40 WD40 domain, foun 90.9 0.41 9E-06 45.9 5.5 108 35-171 149-258 (289)
484 PF02239 Cytochrom_D1: Cytochr 90.4 0.19 4.2E-06 53.5 2.9 114 33-176 6-122 (369)
485 cd00200 WD40 WD40 domain, foun 88.8 0.79 1.7E-05 43.9 5.7 108 35-171 65-174 (289)
486 KOG0284 Polyadenylation factor 88.5 0.27 5.8E-06 51.8 2.1 163 33-230 192-364 (464)
487 KOG0316 Conserved WD40 repeat- 87.1 1.2 2.5E-05 44.2 5.4 147 36-213 32-188 (307)
488 KOG1539 WD repeat protein [Gen 86.9 1.2 2.6E-05 50.9 6.1 106 36-173 127-243 (910)
489 KOG0606 Microtubule-associated 86.8 0.18 3.8E-06 59.2 -0.4 126 409-541 806-946 (1205)
490 KOG0282 mRNA splicing factor [ 86.6 1.3 2.7E-05 47.7 5.8 115 35-183 229-346 (503)
491 KOG2268 Serine/threonine prote 86.5 0.52 1.1E-05 49.1 2.8 122 409-543 94-246 (465)
492 KOG0296 Angio-associated migra 86.2 1.5 3.2E-05 45.7 5.9 104 34-171 161-272 (399)
493 PF03109 ABC1: ABC1 family; I 84.5 0.67 1.4E-05 41.1 2.3 43 413-455 17-59 (119)
494 TIGR03866 PQQ_ABC_repeats PQQ- 84.0 2.7 5.8E-05 41.6 6.7 107 37-173 173-290 (300)
495 KOG0278 Serine/threonine kinas 83.1 2.2 4.8E-05 42.6 5.3 135 36-211 158-302 (334)
496 KOG0316 Conserved WD40 repeat- 82.7 0.8 1.7E-05 45.3 2.1 113 33-174 155-269 (307)
497 KOG1036 Mitotic spindle checkp 82.0 2.2 4.9E-05 43.5 5.1 100 35-166 67-167 (323)
498 KOG0266 WD40 repeat-containing 81.9 1.6 3.5E-05 47.8 4.4 102 35-167 217-323 (456)
499 PLN02876 acyl-CoA dehydrogenas 81.6 0.74 1.6E-05 54.3 1.7 103 412-522 43-161 (822)
500 cd05150 APH Aminoglycoside 3'- 81.6 0.74 1.6E-05 45.5 1.5 74 415-489 6-81 (244)
No 1
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-40 Score=355.71 Aligned_cols=436 Identities=26% Similarity=0.359 Sum_probs=280.9
Q ss_pred ceeeecCCcchhhhccc-cccccCCcchhhhhhcCCCcccccceeecceeeEEEEEEccccceeeecCCCCCCccccchh
Q 042769 34 SFFIDCGEDWGLYAHGL-LGRMKLPQSIDDYVKTAPHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEE 112 (549)
Q Consensus 34 ~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~~v~~sP~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~~ 112 (549)
-.|+++..||+||.+.- .+.+|+||++++.|+.+||.++||.+|.|+|++.||.||++||+.+|+|.+..
T Consensus 67 ~~fl~~p~dgsly~l~~~~sL~Klpftipelv~~~pcrssdGi~ysg~k~d~~~lvD~~tg~~~~tf~~~~--------- 137 (903)
T KOG1027|consen 67 PAFLPDPRDGSLYTLGNNLSLTKLPFTIPELVNASPCRSSDGILYSGSKQDIWYLVDPKTGEIDYTFNTAE--------- 137 (903)
T ss_pred cccCCCccccceeeccCCCccccCCccchhhhccCcccCCCCeEEecccccceEEecCCccceeEEEecCC---------
Confidence 44899999999999998 89999999999999999999999999999999999999999999999998853
Q ss_pred hhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCceeeeeeehhhhhhhccccCCcc----
Q 042769 113 QKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVSWSMTVAEIGYAFLCQDFENPF---- 188 (549)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~Wn~~~~~~~a~~~~~~~~~~~---- 188 (549)
+ . ..+||+|||+|+|.+.|+++-...||+++++|.|.++.......+
T Consensus 138 -----------------------~-~-----~~~v~~grt~ytv~m~d~~~~~~~wn~t~~dy~a~~~~~~~~~~~~~~~ 188 (903)
T KOG1027|consen 138 -----------------------P-I-----KQLVYLGRTNYTVTMYDKNVRGKTWNTTFGDYSAQYPSGVRGEKMSHFH 188 (903)
T ss_pred -----------------------c-c-----hhheecccceeEEecccCcccCceeeccccchhccCCCccCCceeEEEe
Confidence 1 1 159999999999999999999999999999999998877554432
Q ss_pred -----cccccccc--cccCcccccCCCccccccchhHHHHhhhccCCCCcc----c------cCCCCCCCCC-CCCCCCc
Q 042769 189 -----IGATMNTS--YELGPEIGHDFDLPFACQSKGIIQRFRKHNNSDSSR----R------DNHGKPKMLP-APAPDPM 250 (549)
Q Consensus 189 -----~~~~~~~~--~~l~~~w~~~~~~p~~~~~~~~~~~~~~~~l~~~~~----~------~~~~~~~~l~-~~~~~~~ 250 (549)
+.++++.+ .. .|.+|..+||+. .|.++..++..+.. + ...++.+.+. .|..+..
T Consensus 189 ~~~~g~i~t~D~~~g~~---~~~q~~~spvv~-----~~~~~~~gl~~~~~~~v~~~t~~~~~~~~~~v~~~~~~~~~~s 260 (903)
T KOG1027|consen 189 SLGNGYIVTVDSESGEK---LWLQDLLSPVVA-----LYTLFNDGLHSYPFVTVARETYQINALESGTVLLNIAPTKDES 260 (903)
T ss_pred ecCCccEEeccCcccce---eeccccCCceEE-----EEeeccCceeeecceehhHHHHHHHHhhccccccccCCCcCcc
Confidence 22222222 22 299999999999 66666666665532 1 4445555553 3332222
Q ss_pred cccc-cccccccccccCCCCcceeecCC-ccceeccee---ecccccCchhHHHHH------HHhhhhHHHHHHHH----
Q 042769 251 AFMQ-PKADKLSELHHNDGGEGVLTLPP-LETRVSGIV---DAYDVRTPYKNVLSM------LFEQSTALSLLLLA---- 315 (549)
Q Consensus 251 ~~~~-~~~~~~~~~~~g~~~~~~y~~~~-~~~~~~~~~---~~~~~~~p~~~~~~~------~~~~s~~l~~~~~i---- 315 (549)
...+ -..+..+++|+|++..++|++++ ++..++..+ -|-..++|+++.++. .+..++.+.+...+
T Consensus 261 ~~~s~~~~~~~~~l~~~~~~~~l~~~~~~v~~~v~~~~~~~t~~~~e~~~~~~~~~~~~~~~~~~~s~~~~~p~~~~~~~ 340 (903)
T KOG1027|consen 261 PLESSLDFQLLPTLYVGDSSTGLYASFSLVHQNVPLVPRAATLPLLEGPTTDKVTLQSTGERKFPPSTLLRFPSGSLLRY 340 (903)
T ss_pred ccccccccccceeeEecCceeeEEeehhhcccCceeccCCCCCccccCcccchhhhhhcccccCCchhhhhCCCcccccc
Confidence 2222 22244689999999999999999 334433211 111256666555542 01111111100000
Q ss_pred ----Hhhheeeee-------------------------------------------------------------------
Q 042769 316 ----MTVVGFVVR------------------------------------------------------------------- 324 (549)
Q Consensus 316 ----l~li~~~~~------------------------------------------------------------------- 324 (549)
++++|...+
T Consensus 341 ~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~l~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~~l~~~i 420 (903)
T KOG1027|consen 341 IANEWLLMGHHELPLVLYTPMAEIHPYNDGTRLPLNNEKNAFSLLSLPGPELVESELDPKTDGLPMALLASTPIGLLVLI 420 (903)
T ss_pred cccccccccccccchhhhhhHHhhccccCCCCCCCCCcccccccccCCChhhhccccCccccCccchhhhcccchhHHHH
Confidence 111111110
Q ss_pred ----------cceeecceeeeccCCCCCcchhhhhhhchhhcc--CCCCceeeeecccccCCCCCceeeccCCCCcccch
Q 042769 325 ----------NSLVAKGQFLLSGHPSLSNSRTAASKRKKVCKL--GKNGAVVEKKVENMSSGNENGFSISKDASDPFLDL 392 (549)
Q Consensus 325 ----------~~~~~~~~~~~~~~~~~~~~~~~p~Kkkk~rk~--~k~~~~~e~~~~~~s~e~~~~~s~~~~~~~~~~~~ 392 (549)
+. +.. +.+ .+..+. .|.++.++. .+.....+..+. .. ....++..+...+.....
T Consensus 421 ~~~~l~~~~i~~-~~~-----k~~-q~~~s~---~~~k~~~~~~~~~~~~~~~~e~s--e~-~~~~~~~s~~~k~~~~~~ 487 (903)
T KOG1027|consen 421 VCAFLLFFKILG-LFG-----KNQ-QPQVSI---TKQKQVEKPSDPKSGTAEENEQS--ES-KDLSPSDSEISKKLSTGS 487 (903)
T ss_pred HHHHHHHHhHhh-hhc-----ccc-Ccchhh---hhhhhhccccCcccccccccccC--cc-cCCCccccccccccCCCC
Confidence 00 001 001 111111 111111111 100000000000 00 000111111111111111
Q ss_pred hhhhhc-----CcC-Cccceee-eeecccccccCCceEEEeeeecCchhHHHHHHHHHhhhhHHHHHHHHhcCCCCCeeE
Q 042769 393 NKLVRG-----GAQ-GRNVGKL-FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNIVR 465 (549)
Q Consensus 393 ~~~~~~-----~~~-~~~igk~-y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~~~l~HpNIVr 465 (549)
+..... ... ....++. |...+++|.|+.|+|+++|.+.||.||||++..++...+.+|+..|+...+||||||
T Consensus 488 ~~~~~~~~~~~~~~~~~v~~k~~~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviR 567 (903)
T KOG1027|consen 488 PSSKASSLDGPEAGGKVVVGKLFFSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIR 567 (903)
T ss_pred cccccccccccccccceeeeeeeeccHHHcccCCCCcEEEEEeeCCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEE
Confidence 111111 111 2233344 555789999999999999999999999999999999999999999999999999999
Q ss_pred EeeeccCcceEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc
Q 042769 466 WYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 466 l~g~~~~~~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
+|+...+..+.||.+|+|.++|.+++.... ...........+..+.|+ |+|||+.+|||||||
T Consensus 568 yyc~E~d~qF~YIalELC~~sL~dlie~~~--~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLk 633 (903)
T KOG1027|consen 568 YYCSEQDRQFLYIALELCACSLQDLIESSG--LDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLK 633 (903)
T ss_pred EEeeccCCceEEEEehHhhhhHHHHHhccc--cchhhcccccHHHHHHHHHHHHHHHHhcccccccCC
Confidence 999999999999999999999999998731 111111214456667777 999999999999999
No 2
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.87 E-value=5e-23 Score=210.83 Aligned_cols=126 Identities=33% Similarity=0.451 Sum_probs=109.8
Q ss_pred CccceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcce
Q 042769 402 GRNVGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDF 475 (549)
Q Consensus 402 ~~~igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~ 475 (549)
...+++ |...+.||.|+||+||+ +++.++..||||.+.+. ..+.+..|+.+|.++ +|||||+++++++.+++
T Consensus 6 ~~~~~~-y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel-~H~nIV~l~d~~~~~~~ 83 (429)
T KOG0595|consen 6 MRVVGD-YELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKEL-KHPNIVRLLDCIEDDDF 83 (429)
T ss_pred cccccc-ceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhc-CCcceeeEEEEEecCCe
Confidence 345666 99999999999998887 57788999999988765 345567899776665 89999999999999999
Q ss_pred EEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccC
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKAD 535 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~ 535 (549)
+|||||||+ |||.+||+. .+.+++..++.++.|+ |++||+++||||||| |+..+
T Consensus 84 i~lVMEyC~gGDLs~yi~~------~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~ 145 (429)
T KOG0595|consen 84 IYLVMEYCNGGDLSDYIRR------RGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTT 145 (429)
T ss_pred EEEEEEeCCCCCHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccC
Confidence 999999998 699999998 5679999999999999 999999999999999 55544
No 3
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=2.6e-21 Score=206.66 Aligned_cols=133 Identities=26% Similarity=0.323 Sum_probs=118.1
Q ss_pred eeeeecccccccCCceEEE-eeeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 407 KLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
+.|...+.||+|+|+.+|. ++..+|+.||+|++.+. ..+...+||++...+ +|||||+++++|++.+.+|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L-~HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL-KHPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc-CCCcEEeeeeEeecCCceEEE
Confidence 4599999999999999887 56789999999988764 345678999766554 999999999999999999999
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+|+|. |+|..++++ ++.++|.+++.++.|| |.|||+++||||||| +++++-+.++-+++|+
T Consensus 97 LELC~~~sL~el~Kr------rk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLA 165 (592)
T KOG0575|consen 97 LELCHRGSLMELLKR------RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLA 165 (592)
T ss_pred EEecCCccHHHHHHh------cCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEeccccee
Confidence 99997 899999987 6789999999999999 889999999999999 6888888888888875
No 4
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.82 E-value=2.4e-21 Score=202.75 Aligned_cols=133 Identities=26% Similarity=0.305 Sum_probs=118.2
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCc--ceEEEEe
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDK--DFVYLSL 480 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~--~~~yLVm 480 (549)
|+..++||+|.||.||+ ++..+|+.||+|++.... ...+.|||.+|+++ +|||||+|.+..... ..+|||+
T Consensus 119 feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l-~HpNIikL~eivt~~~~~siYlVF 197 (560)
T KOG0600|consen 119 FEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRL-DHPNIIKLEEIVTSKLSGSIYLVF 197 (560)
T ss_pred HHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhc-CCCcccceeeEEEecCCceEEEEE
Confidence 88899999999999999 588999999999888653 22467999776655 999999999987766 6899999
Q ss_pred cccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|||+-||.-++.. ..-.|++.++.++|.|+ |+|||.++|+||||| |+|.+|.-++.+++|+|
T Consensus 198 eYMdhDL~GLl~~-----p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr 266 (560)
T KOG0600|consen 198 EYMDHDLSGLLSS-----PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLAR 266 (560)
T ss_pred ecccchhhhhhcC-----CCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEecccccee
Confidence 9999999999876 34579999999999999 899999999999999 99999999999999998
No 5
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.81 E-value=5.8e-21 Score=198.59 Aligned_cols=140 Identities=23% Similarity=0.369 Sum_probs=123.4
Q ss_pred ceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcc-eEEE
Q 042769 405 VGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKD-FVYL 478 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~-~~yL 478 (549)
+-++|.+.++||.|+||.||+ +.+.+|..||||++++.. ....+||+..|+++-.|||||+|.+++.+++ .+|+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 345599999999999999998 578889999999999763 2245799988888845999999999999988 9999
Q ss_pred EecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhhcC
Q 042769 479 SLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRLV 549 (549)
Q Consensus 479 VmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd~ 549 (549)
|||||.++|.++++.+ +..|++..++.||.|| |+|+|.+|+.|||+| |+..+-..++.+++|+|-|
T Consensus 88 VfE~Md~NLYqLmK~R-----~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 88 VFEFMDCNLYQLMKDR-----NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred eHHhhhhhHHHHHhhc-----CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccc
Confidence 9999999999999882 5679999999999999 889999999999999 7776878888899999965
No 6
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.80 E-value=1.5e-20 Score=191.73 Aligned_cols=136 Identities=24% Similarity=0.302 Sum_probs=119.2
Q ss_pred cceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceE
Q 042769 404 NVGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFV 476 (549)
Q Consensus 404 ~igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~ 476 (549)
....+|++.+.||+|.||+|-++ ....|+.||||.|++.. .-.+.+||++| +.++||||+.+|++|+..+.+
T Consensus 50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIM-SsLNHPhII~IyEVFENkdKI 128 (668)
T KOG0611|consen 50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIM-SSLNHPHIIQIYEVFENKDKI 128 (668)
T ss_pred chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHH-hhcCCCceeehhhhhcCCceE
Confidence 44456999999999999997764 56789999999998752 22567899665 555999999999999999999
Q ss_pred EEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 477 YLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 477 yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
.|||||.. |.|.+|+.. .+.+++..++.+++|| +.|||.++++||||| |+|.|++.++..++|.
T Consensus 129 vivMEYaS~GeLYDYiSe------r~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLS 200 (668)
T KOG0611|consen 129 VIVMEYASGGELYDYISE------RGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLS 200 (668)
T ss_pred EEEEEecCCccHHHHHHH------hccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchh
Confidence 99999997 799999988 6789999999999999 789999999999999 8999999999988875
No 7
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.80 E-value=4.2e-20 Score=187.70 Aligned_cols=135 Identities=27% Similarity=0.232 Sum_probs=119.3
Q ss_pred ceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEE
Q 042769 405 VGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVY 477 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~y 477 (549)
..+ |++.++||+|+||+|+. +.+.+++.+|+|.+++.. ......|..+|.+ ++||.||.++..|++.+.+|
T Consensus 24 ~~d-F~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~-v~hPFiv~l~ysFQt~~kLy 101 (357)
T KOG0598|consen 24 PDD-FEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSK-IKHPFIVKLIYSFQTEEKLY 101 (357)
T ss_pred hhh-eeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHh-CCCCcEeeeEEecccCCeEE
Confidence 344 99999999999999987 566889999999999752 3345678766655 69999999999999999999
Q ss_pred EEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 478 LSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||+||++ |+|+..|++ .+.++++.++.++.+| |.|||+++||||||| |+|.+||..+-++.|.+
T Consensus 102 lVld~~~GGeLf~hL~~------eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k 173 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQR------EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCK 173 (357)
T ss_pred EEEeccCCccHHHHHHh------cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccch
Confidence 9999998 599999988 6789999999999999 889999999999999 99999999999888765
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80 E-value=2.2e-20 Score=191.42 Aligned_cols=124 Identities=26% Similarity=0.295 Sum_probs=106.8
Q ss_pred ceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHHHhh----------hhHHHHHHHHhcCCCCCeeEEeeeccCc
Q 042769 405 VGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRALHD----------VAFKEIQNLIASDQHPNIVRWYGVENDK 473 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~~~----------~~~~Ei~~L~~~l~HpNIVrl~g~~~~~ 473 (549)
+.+.|.+.+.||+|+||.|-++ .+.+|+.||||++.+.... ...+|+++|+++ +|||||+++++|...
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-~HP~IV~~~d~f~~~ 248 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-SHPNIVRIKDFFEVP 248 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-CCCCEEEEeeeeecC
Confidence 5566999999999999987664 7789999999999875211 245899777666 999999999999999
Q ss_pred ceEEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccC
Q 042769 474 DFVYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKAD 535 (549)
Q Consensus 474 ~~~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~ 535 (549)
+..||||||+. |+|++++-. ++.+.++.-..++.|+ +.|||++||+||||| |+..+
T Consensus 249 ds~YmVlE~v~GGeLfd~vv~------nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~ 312 (475)
T KOG0615|consen 249 DSSYMVLEYVEGGELFDKVVA------NKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSND 312 (475)
T ss_pred CceEEEEEEecCccHHHHHHh------ccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccC
Confidence 99999999998 699999988 6678899999999999 889999999999999 66555
No 9
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.80 E-value=4.3e-20 Score=194.81 Aligned_cols=135 Identities=29% Similarity=0.320 Sum_probs=117.7
Q ss_pred ccceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcce
Q 042769 403 RNVGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDF 475 (549)
Q Consensus 403 ~~igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~ 475 (549)
..+.+ |.+++.||.|+|++|++ ..+.++++||||++.+.. .....+|-..|..+-+||.||+||..|++...
T Consensus 70 k~~~D-F~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 70 KTPND-FKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred CChhh-cchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 34444 99999999999999998 478899999999988752 22345666666666699999999999999999
Q ss_pred EEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhh
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
+|+|+||++ |+|.++|++ .+.|++.+++.++.|| |+|||++|||||||| |+|.|||..+.+++
T Consensus 149 LYFvLe~A~nGdll~~i~K------~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFG 219 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKK------YGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFG 219 (604)
T ss_pred eEEEEEecCCCcHHHHHHH------hCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeecc
Confidence 999999996 899999998 6789999999999999 899999999999999 99999998887664
No 10
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.79 E-value=5.9e-20 Score=193.78 Aligned_cols=136 Identities=24% Similarity=0.250 Sum_probs=118.0
Q ss_pred cceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceE
Q 042769 404 NVGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFV 476 (549)
Q Consensus 404 ~igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~ 476 (549)
.+.+ |++.++||+|+||.||++ .+.+|..+|+|+++++. ....+.|-.+|.. .++|+||+||..|++.+.+
T Consensus 139 ~~~D-Fe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~-~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 139 SLDD-FELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAE-VDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred Cccc-chhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhh-cCCCcEEEEEEEecCCCee
Confidence 4445 999999999999999995 66789999999999762 2234455544555 5999999999999999999
Q ss_pred EEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 477 YLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 477 yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||||||++ ||+..+|.. .+.|++.+++.++.++ ++-||+.|+|||||| |+|.+||-++.+++|..
T Consensus 217 YLiMEylPGGD~mTLL~~------~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~ 289 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMR------KDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLST 289 (550)
T ss_pred EEEEEecCCccHHHHHHh------cCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccc
Confidence 99999998 599999988 6789999999999998 789999999999999 99999999999998853
No 11
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.77 E-value=3.2e-20 Score=181.06 Aligned_cols=135 Identities=24% Similarity=0.297 Sum_probs=120.9
Q ss_pred eeeecccccccCCceEEE-eeeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 408 LFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
+|...++||+|.||.||+ ++..+|+.||||+|+... .-.+.|||..|+.+ +|+||+.|+++|...+.+.||+|
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel-~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQEL-KHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHc-cCcchhhhhhhccCCCceEEEEE
Confidence 478889999999999888 588899999999888542 23578999777665 99999999999999999999999
Q ss_pred ccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhhc
Q 042769 482 RCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRL 548 (549)
Q Consensus 482 ~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd 548 (549)
|++.+|...|+. ....++..++..++.++ |+|||++.|+||||| |+.++|.-+..+++|+|.
T Consensus 82 fm~tdLe~vIkd-----~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~ 150 (318)
T KOG0659|consen 82 FMPTDLEVVIKD-----KNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARF 150 (318)
T ss_pred eccccHHHHhcc-----cccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhc
Confidence 999999999987 35679999999999998 889999999999999 899999999999999985
No 12
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.77 E-value=1.1e-19 Score=181.99 Aligned_cols=139 Identities=27% Similarity=0.344 Sum_probs=120.1
Q ss_pred ccceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHHHhh-----hhHHHHHHHHhcCCCCCeeEEeeeccCc--c
Q 042769 403 RNVGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRALHD-----VAFKEIQNLIASDQHPNIVRWYGVENDK--D 474 (549)
Q Consensus 403 ~~igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~~~-----~~~~Ei~~L~~~l~HpNIVrl~g~~~~~--~ 474 (549)
..|.. |+..+.|++|+||.||+ +++.+++.||+|+++.+... ..+|||..|++. +|||||.+..+.... +
T Consensus 73 rsv~e-fe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~-~H~NIV~vkEVVvG~~~d 150 (419)
T KOG0663|consen 73 RSVEE-FEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKA-RHPNIVEVKEVVVGSNMD 150 (419)
T ss_pred ccHHH-HHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhc-CCCCeeeeEEEEeccccc
Confidence 44555 99999999999999888 58899999999999865322 467999777766 899999999987654 4
Q ss_pred eEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 475 FVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 475 ~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
.+|||||||+.||.++|... ..++...++..++.|+ ++|||.+.|+||||| |+...|--++.+++|+|
T Consensus 151 ~iy~VMe~~EhDLksl~d~m-----~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR 225 (419)
T KOG0663|consen 151 KIYIVMEYVEHDLKSLMETM-----KQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAR 225 (419)
T ss_pred eeeeeHHHHHhhHHHHHHhc-----cCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhh
Confidence 69999999999999999872 3579999999999999 889999999999999 88999999999999998
Q ss_pred c
Q 042769 548 L 548 (549)
Q Consensus 548 d 548 (549)
-
T Consensus 226 ~ 226 (419)
T KOG0663|consen 226 E 226 (419)
T ss_pred h
Confidence 4
No 13
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=3.5e-19 Score=188.15 Aligned_cols=137 Identities=27% Similarity=0.371 Sum_probs=117.7
Q ss_pred cceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH--------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcc
Q 042769 404 NVGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA--------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKD 474 (549)
Q Consensus 404 ~igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~--------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~ 474 (549)
.+++ |.+.+.||+|+||+|+.+ +..+++.||+|++.++ ..+...+|+.++..+..||||+++++++....
T Consensus 15 ~~g~-y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 15 SIGK-YELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred ccCc-eeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 3445 999999999999998884 7888999999977664 12345589977766644999999999999999
Q ss_pred eEEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccC-CCCchhhhhh
Q 042769 475 FVYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKAD-GHPSPLLLSL 545 (549)
Q Consensus 475 ~~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~-G~p~~~l~~L 545 (549)
.+|+|||||. |+|++++.. .+++.|..++.++.|+ ++|||+++|+||||| |++.+ ++.++.++++
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~------~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~ 167 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN------KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGL 167 (370)
T ss_pred eEEEEEEecCCccHHHHHHH------cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccc
Confidence 9999999998 599999988 5789999999999999 899999999999999 88988 8888887776
Q ss_pred hh
Q 042769 546 MR 547 (549)
Q Consensus 546 mr 547 (549)
.+
T Consensus 168 s~ 169 (370)
T KOG0583|consen 168 SA 169 (370)
T ss_pred cc
Confidence 53
No 14
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.76 E-value=7.3e-19 Score=173.85 Aligned_cols=136 Identities=25% Similarity=0.313 Sum_probs=118.1
Q ss_pred cceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceE
Q 042769 404 NVGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFV 476 (549)
Q Consensus 404 ~igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~ 476 (549)
.+.+ |+..+.||.|+||.|.+ +.+.+|..+|+|++.+.. .+....|...|.+. .||++++|++.|.+.+.+
T Consensus 42 ~l~d-fe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-~~PFlv~l~~t~~d~~~l 119 (355)
T KOG0616|consen 42 SLQD-FERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-SHPFLVKLYGTFKDNSNL 119 (355)
T ss_pred chhh-hhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-cCceeEEEEEeeccCCeE
Confidence 3444 99999999999999988 688889999999888652 33455677555554 899999999999999999
Q ss_pred EEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 477 YLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 477 yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||||||.+ |.|++++++ .+++++..++.++.|| |+|||+++|++|||| |+|++||-++.+++.++
T Consensus 120 ymvmeyv~GGElFS~Lrk------~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK 192 (355)
T KOG0616|consen 120 YMVMEYVPGGELFSYLRK------SGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAK 192 (355)
T ss_pred EEEEeccCCccHHHHHHh------cCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceE
Confidence 99999998 599999998 6789999999999999 889999999999999 99999999988776543
No 15
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.75 E-value=5.7e-19 Score=179.63 Aligned_cols=130 Identities=23% Similarity=0.283 Sum_probs=115.6
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHH----HHHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcc-eEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLV----RALHDVAFKEIQNLIASDQHPNIVRWYGVENDKD-FVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~----~~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~-~~yLVmE~ 482 (549)
.+..+.||+|+.|+|++ .++.+++.+|+|.+. .+...+..+|++++.+. +||+||.+||+|..+. .++|+|||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCceEEeehhh
Confidence 66678999999999988 588999999999984 34566788999888777 9999999999999999 59999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eeccc-ceeEEEeecc----ccccCCCCchhhhhh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLD-SVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH-~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
|+ |+|.+++.. .+.++|.....++.++ |.||| +++||||||| |++++|..++-+++-
T Consensus 160 MDgGSLd~~~k~------~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGV 225 (364)
T KOG0581|consen 160 MDGGSLDDILKR------VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGV 225 (364)
T ss_pred cCCCCHHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccc
Confidence 98 699999987 5779999999999999 88999 5999999999 999999999887763
No 16
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.73 E-value=4e-19 Score=176.05 Aligned_cols=133 Identities=21% Similarity=0.286 Sum_probs=114.6
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|+...++|+|+||.|++ +++.+|+.||||++..+. .+-+.|||..| +.++|||+|.|+++|.....++||+||
T Consensus 4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmL-KqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRML-KQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHH-HhcccchHHHHHHHHHhcceeEEEeee
Confidence 78888999999998888 488999999999998642 33578999555 455999999999999999999999999
Q ss_pred cccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 483 CTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 483 ~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+-++.+.|..+ ..+++...+..++.|+ +.|+|++++|||||| |+..+|-.++-+++.+|
T Consensus 83 ~dhTvL~eLe~~-----p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR 149 (396)
T KOG0593|consen 83 CDHTVLHELERY-----PNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFAR 149 (396)
T ss_pred cchHHHHHHHhc-----cCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhH
Confidence 998887777773 3568899999999999 789999999999999 88999988877777666
No 17
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.72 E-value=1.6e-18 Score=182.57 Aligned_cols=138 Identities=24% Similarity=0.259 Sum_probs=115.1
Q ss_pred eeeeeecccccccCCceEEEeeeecCchhHHHHHHHHH---hhhhHHHHHHHHhcCCCCCeeEEeeeccCcc-eEEEEec
Q 042769 406 GKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL---HDVAFKEIQNLIASDQHPNIVRWYGVENDKD-FVYLSLE 481 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~---~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~-~~yLVmE 481 (549)
++.|.....||+|+||.||+....+|+.||||++.... ...+..|+..|.++ +|||+|+|+|||.+.+ +.+||+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l-~H~Nlv~LlGyC~e~~~~~~LVYE 152 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRL-RHPNLVKLLGYCLEGGEHRLLVYE 152 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcC-CCcCcccEEEEEecCCceEEEEEE
Confidence 35588888999999999877666777999999887643 34588899666555 8999999999999988 5999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccce---eEEEeecc----ccccCCCCchhhhhhhhc
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSV---KVIIRDLS----LWKADGHPSPLLLSLMRL 548 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~---~IIHRDLK----Ll~~~G~p~~~l~~Lmrd 548 (549)
||. |+|.++|..... ..+++....+|+.++ |+|||.. .||||||| |+|++..|++.++.|++.
T Consensus 153 ym~nGsL~d~L~~~~~----~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~ 226 (361)
T KOG1187|consen 153 YMPNGSLEDHLHGKKG----EPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKL 226 (361)
T ss_pred ccCCCCHHHHhCCCCC----CCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCccc
Confidence 996 899999987321 178888888999888 9999964 49999999 999999999999988753
No 18
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=6.4e-19 Score=173.14 Aligned_cols=140 Identities=23% Similarity=0.356 Sum_probs=116.3
Q ss_pred cceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEee-eccCcce-
Q 042769 404 NVGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYG-VENDKDF- 475 (549)
Q Consensus 404 ~igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g-~~~~~~~- 475 (549)
...+ |++.++||+|+||+||+ ..+.+|..+|.|.+.-. ..+....|+..|.. ++|||||++++ .+..+..
T Consensus 17 ~l~~-y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQ-L~HpNIVqYy~~~f~~~~ev 94 (375)
T KOG0591|consen 17 TLAD-YQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQ-LNHPNIVQYYAHSFIEDNEV 94 (375)
T ss_pred cHHH-HHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHh-cCCchHHHHHHHhhhccchh
Confidence 3444 99999999999999998 58899999999988732 34566789965554 59999999998 5555555
Q ss_pred EEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccc--ee--EEEeecc----ccccCCCCchhhh
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDS--VK--VIIRDLS----LWKADGHPSPLLL 543 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~--~~--IIHRDLK----Ll~~~G~p~~~l~ 543 (549)
++|+||||. |||.+.|+..+. ....++|..++.++.|+ |.+||. .+ |+||||| +++.+|..++=++
T Consensus 95 lnivmE~c~~GDLsqmIk~~K~--qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDf 172 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKHFKK--QKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDF 172 (375)
T ss_pred hHHHHHhhcccCHHHHHHHHHh--ccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccc
Confidence 999999997 899999987662 45679999999999999 889998 55 9999999 8999998888888
Q ss_pred hhhh
Q 042769 544 SLMR 547 (549)
Q Consensus 544 ~Lmr 547 (549)
+|.|
T Consensus 173 GL~r 176 (375)
T KOG0591|consen 173 GLGR 176 (375)
T ss_pred hhHh
Confidence 8766
No 19
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.71 E-value=3.2e-18 Score=178.20 Aligned_cols=135 Identities=25% Similarity=0.324 Sum_probs=109.1
Q ss_pred CCccceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHHH-----------------hhhhHHHHHHHHhcCCCCC
Q 042769 401 QGRNVGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL-----------------HDVAFKEIQNLIASDQHPN 462 (549)
Q Consensus 401 ~~~~igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~-----------------~~~~~~Ei~~L~~~l~HpN 462 (549)
....+.. |++.+.||+|.||.|.+ .+..+++.||||++.+.. .+...+||.+|.+ +.|||
T Consensus 92 ~~k~lNq-y~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKk-l~H~n 169 (576)
T KOG0585|consen 92 DRKQLNQ-YELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKK-LHHPN 169 (576)
T ss_pred cceehhh-eehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHh-cCCcC
Confidence 3444555 99999999999999877 477889999999887641 1256789966655 59999
Q ss_pred eeEEeeeccCc--ceEEEEecccc-cchhhhhhhcccCCcccc-cCchhhhHHhhhe---eecccceeEEEeecc----c
Q 042769 463 IVRWYGVENDK--DFVYLSLERCT-CSLDDLIQTYSDSSCNSV-FGEDQATRAMIEY---KLRLDSVKVIIRDLS----L 531 (549)
Q Consensus 463 IVrl~g~~~~~--~~~yLVmE~~~-GsL~~~L~~~~~~~~~~~-l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----L 531 (549)
||+|+++..+. +.+|||+|||. |.+...- . .+. +++.+++.|++.+ |+|||.+|||||||| |
T Consensus 170 VV~LiEvLDDP~s~~~YlVley~s~G~v~w~p-~------d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLL 242 (576)
T KOG0585|consen 170 VVKLIEVLDDPESDKLYLVLEYCSKGEVKWCP-P------DKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLL 242 (576)
T ss_pred eeEEEEeecCcccCceEEEEEeccCCccccCC-C------CcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheE
Confidence 99999998765 46999999997 6664322 1 334 8999999999999 999999999999999 8
Q ss_pred cccCCCCchhhhh
Q 042769 532 WKADGHPSPLLLS 544 (549)
Q Consensus 532 l~~~G~p~~~l~~ 544 (549)
+.++|+.++.+++
T Consensus 243 l~~~g~VKIsDFG 255 (576)
T KOG0585|consen 243 LSSDGTVKISDFG 255 (576)
T ss_pred EcCCCcEEeeccc
Confidence 9999999887765
No 20
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=2.1e-18 Score=185.50 Aligned_cols=137 Identities=22% Similarity=0.291 Sum_probs=120.3
Q ss_pred CccceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcc
Q 042769 402 GRNVGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKD 474 (549)
Q Consensus 402 ~~~igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~ 474 (549)
...+|- |++++.||+|+-|.|.+ ++..||+.+|||++.+. ....+.+|| .+++++.||||+++|++++++.
T Consensus 8 ~~tiGp-wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEI-viMkLi~HpnVl~LydVwe~~~ 85 (786)
T KOG0588|consen 8 KNTIGP-WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREI-VIMKLIEHPNVLRLYDVWENKQ 85 (786)
T ss_pred cccccc-eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhh-HHHHHhcCCCeeeeeeeeccCc
Confidence 345666 99999999999999777 68899999999999865 123466888 6778889999999999999999
Q ss_pred eEEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 475 FVYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 475 ~~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
++|+|+||+. |.|+++|.. .+++++.++.+++.|| +.|||..+|+||||| |+|..++.++..++++
T Consensus 86 ~lylvlEyv~gGELFdylv~------kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMA 159 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVR------KGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMA 159 (786)
T ss_pred eEEEEEEecCCchhHHHHHh------hCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeecccee
Confidence 9999999997 699999988 6789999999999999 789999999999999 8888888887777654
No 21
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.70 E-value=3.2e-18 Score=181.10 Aligned_cols=135 Identities=26% Similarity=0.302 Sum_probs=116.7
Q ss_pred eeecccccccCCceEEEeeeecCc-hhHHHHHHHH--HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGR-PVAVKRLVRA--LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~-~VAVK~i~~~--~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+.+.+.||+|.||.|+. +.+++. .||+|.++.. ..+.+.+|+++|+++ +|+|||+|+++|..++.+|||||||.
T Consensus 208 l~l~~~LG~G~FG~V~~-g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L-~H~~lV~l~gV~~~~~piyIVtE~m~~ 285 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWL-GKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKL-RHEKLVKLYGVCTKQEPIYIVTEYMPK 285 (468)
T ss_pred HHHHHHhcCCccceEEE-EEEcCCCcccceEEeccccChhHHHHHHHHHHhC-cccCeEEEEEEEecCCceEEEEEeccc
Confidence 56678999999998654 556655 9999988863 234677899877666 99999999999999999999999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhhcC
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRLV 549 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd~ 549 (549)
|+|.+||+.. ....+...+.+.++.|| |+||+++++|||||- |+++++..++.+++|+|.|
T Consensus 286 GsLl~yLr~~----~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~ 353 (468)
T KOG0197|consen 286 GSLLDYLRTR----EGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLI 353 (468)
T ss_pred CcHHHHhhhc----CCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEccccccccc
Confidence 9999999972 35678899999999999 999999999999998 9999999999999999853
No 22
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.70 E-value=1.3e-18 Score=183.80 Aligned_cols=133 Identities=21% Similarity=0.256 Sum_probs=118.8
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHHHhh-----hhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRALHD-----VAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~~~-----~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|.+.+.||+|+||.||+ +.+.+.+.||+|.+.+.... ...+|++++.++ +|||||.+++.|+...++++|.||
T Consensus 4 yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~l-kHpniv~m~esfEt~~~~~vVte~ 82 (808)
T KOG0597|consen 4 YHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSL-KHPNIVEMLESFETSAHLWVVTEY 82 (808)
T ss_pred hhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhc-CCcchhhHHHhhcccceEEEEehh
Confidence 88889999999999888 57788999999988875332 477888666554 999999999999999999999999
Q ss_pred cccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhhc
Q 042769 483 CTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRL 548 (549)
Q Consensus 483 ~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd 548 (549)
|.|+|..+|.. .+.++|+.++.+..++ |.|||+++|+|||+| |++..|..+.-.+.|+|-
T Consensus 83 a~g~L~~il~~------d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~ 149 (808)
T KOG0597|consen 83 AVGDLFTILEQ------DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARA 149 (808)
T ss_pred hhhhHHHHHHh------ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhh
Confidence 99999999988 7789999999999998 889999999999999 899999999888888773
No 23
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.70 E-value=1.6e-18 Score=167.01 Aligned_cols=135 Identities=26% Similarity=0.288 Sum_probs=113.6
Q ss_pred ccceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcce
Q 042769 403 RNVGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDF 475 (549)
Q Consensus 403 ~~igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~ 475 (549)
-.+.+ |++++.||+|.||.||. +.+.++-.||+|++.++. ..+..+|++ +.+-++||||.++|++|.+...
T Consensus 19 ~~l~d-feigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiE-Iqs~L~hpnilrlY~~fhd~~r 96 (281)
T KOG0580|consen 19 WTLDD-FEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIE-IQSHLRHPNILRLYGYFHDSKR 96 (281)
T ss_pred cchhh-ccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeE-eecccCCccHHhhhhheeccce
Confidence 34555 99999999999999998 467788899999877652 335668884 4667799999999999999999
Q ss_pred EEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhh
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLL 543 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~ 543 (549)
+||++||.. |+|+..|+..+ ..++++..+..++.|+ |.|+|.++||||||| |+..+|.-++..+
T Consensus 97 iyLilEya~~gel~k~L~~~~----~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdf 168 (281)
T KOG0580|consen 97 IYLILEYAPRGELYKDLQEGR----MKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADF 168 (281)
T ss_pred eEEEEEecCCchHHHHHHhcc----cccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCC
Confidence 999999996 89999998633 5679999999999999 899999999999999 7888887666544
No 24
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.70 E-value=8.2e-18 Score=186.09 Aligned_cols=140 Identities=25% Similarity=0.256 Sum_probs=118.1
Q ss_pred eeecccccccCCceEEEeee------ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEE
Q 042769 409 FVSNTEIAKGSNGTVVYEGI------YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYL 478 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~------~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yL 478 (549)
.+..+.||+|+||+||.+.. .+.+.||||.++.. ..+++.||++ |++.++|||||+|+|+|..++.+||
T Consensus 488 i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REae-Lla~l~H~nIVrLlGVC~~~~P~~M 566 (774)
T KOG1026|consen 488 IVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAE-LLAELQHPNIVRLLGVCREGDPLCM 566 (774)
T ss_pred eeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHH-HHHhccCCCeEEEEEEEccCCeeEE
Confidence 55678999999999887422 23578999999964 3446778884 5566699999999999999999999
Q ss_pred Eecccc-cchhhhhhhcccCCc--------ccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhh
Q 042769 479 SLERCT-CSLDDLIQTYSDSSC--------NSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLL 542 (549)
Q Consensus 479 VmE~~~-GsL~~~L~~~~~~~~--------~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l 542 (549)
|+|||. |||.+||+.+.+... ...++..+.+.++.|| |+||-++.+|||||- |+.++-..++.+
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsD 646 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISD 646 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecc
Confidence 999997 999999998654321 2348888999999999 999999999999998 999999999999
Q ss_pred hhhhhcC
Q 042769 543 LSLMRLV 549 (549)
Q Consensus 543 ~~Lmrd~ 549 (549)
++|+|||
T Consensus 647 fGLsRdi 653 (774)
T KOG1026|consen 647 FGLSRDI 653 (774)
T ss_pred cccchhh
Confidence 9999997
No 25
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.70 E-value=5.6e-18 Score=177.96 Aligned_cols=133 Identities=27% Similarity=0.301 Sum_probs=112.3
Q ss_pred eeecccccccCCceEEEeeeecCch-hHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcc-eEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRP-VAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKD-FVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~-VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~-~~yLVmE 481 (549)
....+.||+|+||+| +++.+.|+. ||||++.... ...+.+|+..|.+ ++|||||+++|+|.... ..+||||
T Consensus 43 l~~~~~iG~G~~g~V-~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~-l~HpNIV~f~G~~~~~~~~~~iVtE 120 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTV-YKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSR-LRHPNIVQFYGACTSPPGSLCIVTE 120 (362)
T ss_pred hhhhhhcccCCceeE-EEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHh-CCCCCeeeEEEEEcCCCCceEEEEE
Confidence 444567999999985 478888888 9999888643 3467889966655 59999999999999888 7999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eeccccee-EEEeecc----ccccCC-CCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVK-VIIRDLS----LWKADG-HPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~-IIHRDLK----Ll~~~G-~p~~~l~~Lmr 547 (549)
|++ |+|.++++.. ....++...+..++.|| |.|||+++ ||||||| |++.++ +.++.+++|.|
T Consensus 121 y~~~GsL~~~l~~~----~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr 192 (362)
T KOG0192|consen 121 YMPGGSLSVLLHKK----RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSR 192 (362)
T ss_pred eCCCCcHHHHHhhc----ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccce
Confidence 997 7999999873 24679999999999999 88999999 9999999 889998 88888888765
No 26
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.70 E-value=3.7e-18 Score=184.72 Aligned_cols=137 Identities=23% Similarity=0.267 Sum_probs=115.5
Q ss_pred cceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceE
Q 042769 404 NVGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFV 476 (549)
Q Consensus 404 ~igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~ 476 (549)
.+.+ |.+.++||+|+||+|++ ..+.+++.+|||.+++. ..+....|.+++...-+||.+++|+.+|++.+++
T Consensus 366 ~l~~-F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 366 TLDD-FRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred cccc-eEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 3444 99999999999999988 46788999999988864 2345556765554444899999999999999999
Q ss_pred EEEeccccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhhc
Q 042769 477 YLSLERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRL 548 (549)
Q Consensus 477 yLVmE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd 548 (549)
|+||||++| ++..+++ .+.+++..++.|+..+ |+|||+++||+|||| |+|..||.++.+++|.+.
T Consensus 445 ~fvmey~~Ggdm~~~~~-------~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIH-------TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEEEecCCCcEEEEEe-------cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccc
Confidence 999999985 8655544 3679999999999998 899999999999999 899999999999988653
No 27
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.69 E-value=6.9e-18 Score=177.62 Aligned_cols=132 Identities=22% Similarity=0.202 Sum_probs=112.8
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|++.+.||+|+||+||++ ...+++.||||++.+. ....+.+|+..+.. ++||||+++++++.+...+|||||
T Consensus 3 y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~-~~~~~iv~~~~~~~~~~~~~lv~E 81 (363)
T cd05628 3 FESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVE-ADSLWVVKMFYSFQDKLNLYLIME 81 (363)
T ss_pred ceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHh-CCCCCcceEEEEEecCCeEEEEEc
Confidence 888999999999999884 6678999999987643 12345567755555 499999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||+ |+|.+++.. .+.+++..++.++.|+ |+|||+++|+||||| |++.+|++++..+++++
T Consensus 82 ~~~gg~L~~~l~~------~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~ 149 (363)
T cd05628 82 FLPGGDMMTLLMK------KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCT 149 (363)
T ss_pred CCCCCcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcc
Confidence 997 599999987 4578999999999999 889999999999999 89999998888887765
No 28
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.69 E-value=3.8e-18 Score=173.06 Aligned_cols=137 Identities=23% Similarity=0.267 Sum_probs=117.3
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHHHh-----hhhHHHHHHHHhcCCCCC-eeEEeeeccCcc------e
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRALH-----DVAFKEIQNLIASDQHPN-IVRWYGVENDKD------F 475 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~~-----~~~~~Ei~~L~~~l~HpN-IVrl~g~~~~~~------~ 475 (549)
|+..++||+|+||+||. +.+.+|+.||+|+++.+.. ..+.+|+..| +.++|+| ||+|++++.... .
T Consensus 13 ~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisll-k~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 13 YEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLL-KRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHH-HHhCCCcceEEEEeeeeecccccccce
Confidence 77778899999999888 5788999999998875432 2468999555 5559999 999999999877 7
Q ss_pred EEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhhc
Q 042769 476 VYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRL 548 (549)
Q Consensus 476 ~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd 548 (549)
++||+||+.-+|..++....... ..++...++.+++|+ |+|||+++|+||||| |++++|.-++.+++|+|.
T Consensus 92 l~lvfe~~d~DL~~ymd~~~~~~--~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra 169 (323)
T KOG0594|consen 92 LYLVFEFLDRDLKKYMDSLPKKP--QGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARA 169 (323)
T ss_pred EEEEEEeecccHHHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence 99999999999999999854221 457778899999999 899999999999999 899999999999999884
No 29
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.69 E-value=4e-18 Score=169.92 Aligned_cols=128 Identities=23% Similarity=0.335 Sum_probs=111.6
Q ss_pred eeee-cccccccCCceEEE-eeeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 408 LFVS-NTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 408 ~y~~-~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
.|++ .+.||+|+|+.|-- ..+.+|.++|||+|.+. ...+.++|++.+.....|+||++|+++|+++..+|||||-
T Consensus 78 ~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEK 157 (463)
T KOG0607|consen 78 MYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEK 157 (463)
T ss_pred HHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEec
Confidence 3665 57999999999765 48899999999999874 3557889999988888999999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPL 541 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~ 541 (549)
|. |.|.+.|++ ...+++..+.++...| |.|||.+||.||||| |.-...+.+|+
T Consensus 158 m~GGplLshI~~------~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPv 218 (463)
T KOG0607|consen 158 MRGGPLLSHIQK------RKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPV 218 (463)
T ss_pred ccCchHHHHHHH------hhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCce
Confidence 98 599999988 6689999999999999 999999999999999 55555555655
No 30
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.68 E-value=1.1e-17 Score=175.59 Aligned_cols=133 Identities=23% Similarity=0.279 Sum_probs=112.3
Q ss_pred eeeecccccccCCceEEE-eeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 408 LFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
.|++.+.||+|+||.||+ .+..+|+.||||++.... ...+.+|+..|..+ +||||+++++++.+.+..||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-DNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCeEEEEE
Confidence 388899999999999888 466789999999876431 22355788665554 9999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|||. |+|.+++.. .+.+++..++.++.|+ |+|||+++|+||||| |++.+|..++..+++.+
T Consensus 81 E~~~~g~L~~~l~~------~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 149 (364)
T cd05599 81 EYLPGGDMMTLLMK------KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCT 149 (364)
T ss_pred CCCCCcHHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccce
Confidence 9997 599999977 4568999999999999 889999999999999 88999988887776653
No 31
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.68 E-value=1.4e-17 Score=176.08 Aligned_cols=132 Identities=24% Similarity=0.272 Sum_probs=111.2
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|.+.+.||+|+||.||+ .+..+++.||||++.+. ....+.+|+..+.. ++||||+++++++.+..++|||||
T Consensus 3 y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 3 FHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAE-SDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred ceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHh-CCCCCcceEEEEEEcCCeeEEEEe
Confidence 88889999999999988 46678999999976542 12345678865544 599999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||+ |+|.+++.. ...+++..++.++.|+ |+|||+++|+||||| |++.+|..+..+++|.+
T Consensus 82 ~~~gg~L~~~l~~------~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~ 149 (377)
T cd05629 82 FLPGGDLMTMLIK------YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLST 149 (377)
T ss_pred CCCCCcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccc
Confidence 997 599999976 4568889999999998 889999999999999 88999988887777653
No 32
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.68 E-value=2.1e-17 Score=179.31 Aligned_cols=133 Identities=24% Similarity=0.333 Sum_probs=110.5
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcc------eEE
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKD------FVY 477 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~------~~y 477 (549)
+...+.||+|+||.||. +++.+|+.||||.+++. ..+...+|++.|.++ +|||||+++++-++.. ...
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKL-nh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKL-NHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHc-CchhhhhhcccCCccccCcccccce
Confidence 67778999999999988 57899999999999874 355778999888776 7999999999977654 578
Q ss_pred EEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc---ccccCCCCchhhhhh
Q 042769 478 LSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS---LWKADGHPSPLLLSL 545 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK---Ll~~~G~p~~~l~~L 545 (549)
++||||. |||...|++ ..+..++++..++.++..+ |.|||++||+||||| .+...|.|.-.+.||
T Consensus 94 lvmEyC~gGsL~~~L~~---PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKL 165 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNS---PENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKL 165 (732)
T ss_pred EEEeecCCCcHHHHhcC---cccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEee
Confidence 9999998 699999987 3345679999999999888 899999999999999 555566655555443
No 33
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.67 E-value=1.6e-17 Score=175.86 Aligned_cols=133 Identities=23% Similarity=0.250 Sum_probs=112.3
Q ss_pred eeeecccccccCCceEEE-eeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 408 LFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
.|+..++||+|+||.||+ ....+++.||+|++.+.. ...+.+|+..+.. ++|||||++++++.+.+.+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~-~~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAE-ADNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHh-CCCCcCCeEEEEEEeCCEEEEEE
Confidence 388899999999999888 466788999999776431 2345678755544 59999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|||+ |+|.+++.. .+.+++..++.++.|+ |+|||+++|+||||| |++.+|+.++..+.|.+
T Consensus 81 E~~~gg~L~~~l~~------~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~ 149 (382)
T cd05625 81 DYIPGGDMMSLLIR------MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT 149 (382)
T ss_pred eCCCCCcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCc
Confidence 9997 599999977 4568889999999998 889999999999999 88999998888877754
No 34
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.67 E-value=2e-17 Score=171.27 Aligned_cols=136 Identities=24% Similarity=0.202 Sum_probs=117.4
Q ss_pred ceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 405 VGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
-.+.|++.++||.|..++||. ..+.+++.||||++..+. .+.+.+|++. +++++||||++++.+|..+..+|+|
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~-msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQT-MSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHH-hhhcCCCCcceEEEEEEecceeEEe
Confidence 345599999999999998888 477889999999998653 2456788865 4677999999999999999999999
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
|.||. |++.++++..- ...++|..+..+++++ |.|||++|.|||||| |++.+|..++..++-
T Consensus 103 mpfMa~GS~ldIik~~~----~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgv 172 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYY----PDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGV 172 (516)
T ss_pred ehhhcCCcHHHHHHHHc----cccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCcee
Confidence 99998 79999998744 4569999999999999 889999999999999 999999988776653
No 35
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.67 E-value=2.2e-17 Score=175.02 Aligned_cols=132 Identities=23% Similarity=0.222 Sum_probs=111.4
Q ss_pred eeeecccccccCCceEEE-eeeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 408 LFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
.|+..+.||+|+||+||+ ....+++.||||++.+. ....+.+|+..+.. ++||||+++++++.+.+.+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~-l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAE-ADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh-cCCCCeeeeEEEEecCCEEEEEE
Confidence 388889999999999988 46678999999987643 22345678865544 59999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|||+ |+|.+++.. ...+++..++.++.|+ |+|||+++|+||||| |++.+|+.++..++|.
T Consensus 81 E~~~gg~L~~~l~~------~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~ 148 (381)
T cd05626 81 DYIPGGDMMSLLIR------MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLC 148 (381)
T ss_pred ecCCCCcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCC
Confidence 9997 599999977 4568888999999998 899999999999999 8899998888777764
No 36
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.67 E-value=2.2e-17 Score=171.53 Aligned_cols=137 Identities=25% Similarity=0.234 Sum_probs=114.2
Q ss_pred ccceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcce
Q 042769 403 RNVGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDF 475 (549)
Q Consensus 403 ~~igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~ 475 (549)
..+.+ |++.+.||+|+||.||.+ ...+++.||+|++.+. ..+.+.+|+..+..+ +||||+++++++...+.
T Consensus 15 ~~~~~-y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~ 92 (329)
T PTZ00263 15 WKLSD-FEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-SHPFIVNMMCSFQDENR 92 (329)
T ss_pred CCchh-eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEcCCE
Confidence 34445 999999999999998884 5667899999976543 223466788666554 99999999999999999
Q ss_pred EEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
.|++||||. |+|.+++.. ...+++..+..++.|+ |+|||+++|+||||| |++.+|..++.++++.+
T Consensus 93 ~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 166 (329)
T PTZ00263 93 VYFLLEFVVGGELFTHLRK------AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAK 166 (329)
T ss_pred EEEEEcCCCCChHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCce
Confidence 999999997 599999987 4568889999999998 899999999999999 88999988887776654
No 37
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.67 E-value=5.3e-17 Score=164.74 Aligned_cols=136 Identities=24% Similarity=0.325 Sum_probs=115.5
Q ss_pred ceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccC-----c
Q 042769 405 VGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVEND-----K 473 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~-----~ 473 (549)
+...|...+.||+|+||.|+. .+..+|+.||||++... ..++..||+..|.. ++|+||+.+++.+.. -
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~-~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRH-LRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHH-hcCCCcceEEeeccccccccc
Confidence 344466678999999998766 47889999999998843 35578899965544 589999999999875 3
Q ss_pred ceEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 474 DFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 474 ~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
..+|+|+|+|+.+|.+.|+. +..++++.+..++.|+ |.|+|+.+|+||||| |++.+-.-++..++|+
T Consensus 99 ~DvYiV~elMetDL~~iik~------~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 99 NDVYLVFELMETDLHQIIKS------QQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred ceeEEehhHHhhHHHHHHHc------CccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccce
Confidence 35999999999999999988 5569999999999999 889999999999999 8888888888888888
Q ss_pred h
Q 042769 547 R 547 (549)
Q Consensus 547 r 547 (549)
|
T Consensus 173 R 173 (359)
T KOG0660|consen 173 R 173 (359)
T ss_pred e
Confidence 7
No 38
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.67 E-value=2.7e-17 Score=173.74 Aligned_cols=131 Identities=24% Similarity=0.264 Sum_probs=111.1
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|++.+.||+|+||.||+ ++..+++.||||++.+. ......+|+..|.. ++||||+++++.+..++.+|+|||
T Consensus 3 y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~-l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 3 FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAE-ADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHh-CCCCCcceEEEEEEcCCEEEEEEe
Confidence 88999999999999988 46778999999977643 12345678865554 599999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
||+ |+|.+++.. .+.+++..++.++.|+ |+|||+++|+||||| |++.+|..++..++++
T Consensus 82 ~~~~g~L~~~i~~------~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a 148 (376)
T cd05598 82 YIPGGDMMSLLIR------LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 148 (376)
T ss_pred CCCCCcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCC
Confidence 997 599999977 4568889999999998 899999999999999 8899998887777664
No 39
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.66 E-value=1.9e-17 Score=170.20 Aligned_cols=133 Identities=24% Similarity=0.215 Sum_probs=114.0
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|++.+.||+|.-|+||++ ...++..+|+|++.++. ..++..|-++| +.++||.++.||..|+.+.+.|++||
T Consensus 79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL-~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREIL-SLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHH-HhcCCCccchhhheeeccceeEEEEe
Confidence 888999999999999995 45567999999888752 22344455444 55699999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
||. |+|..+++++. .+.+++..++.|+.++ |+|||..|||.|||| |+.++||.-+.+++|.
T Consensus 158 yCpGGdL~~LrqkQp----~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS 226 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQP----GKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLS 226 (459)
T ss_pred cCCCccHHHHHhhCC----CCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeecccc
Confidence 998 59999998844 6789999999999999 889999999999999 9999999888887764
No 40
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.66 E-value=3.5e-17 Score=167.79 Aligned_cols=133 Identities=25% Similarity=0.329 Sum_probs=112.0
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH---hhhhHHHHHHHHhcCCCCCeeEEeeeccCcc--eEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL---HDVAFKEIQNLIASDQHPNIVRWYGVENDKD--FVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~---~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~--~~yLVmE~ 482 (549)
+...+.||+|+||.||+. ...+|+.+|||.+.... .+...+|+..|..+ +|||||+++|...... .++|.|||
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l-~~p~IV~~~G~~~~~~~~~~~i~mEy 97 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRL-NHPNIVQYYGSSSSRENDEYNIFMEY 97 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhC-CCCCEEeeCCccccccCeeeEeeeec
Confidence 777889999999999884 66679999999877653 34477899777666 7999999999865555 69999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----cccc-CCCCchhhhhhhh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKA-DGHPSPLLLSLMR 547 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~-~G~p~~~l~~Lmr 547 (549)
+. |+|.+++.+++ +.+++..++++..|+ |.|||++|||||||| |++. +|.-++.++++++
T Consensus 98 ~~~GsL~~~~~~~g-----~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~ 166 (313)
T KOG0198|consen 98 APGGSLSDLIKRYG-----GKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAK 166 (313)
T ss_pred cCCCcHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccc
Confidence 97 69999999833 269999999999999 889999999999999 8888 7888888877654
No 41
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.66 E-value=8.6e-18 Score=155.70 Aligned_cols=133 Identities=26% Similarity=0.258 Sum_probs=116.7
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|...++||+|.||+|++ ++..+++.||+|+++... ...+.+|+..|.. ++|.||||++++...+..+-+|+||
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllke-lkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE-LKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHH-hhhcceeehhhhhccCceeEEeHHH
Confidence 55668999999999988 578889999999887542 2368899965555 4999999999999999999999999
Q ss_pred cccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 483 CTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 483 ~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|..+|..|... .++.+....++.++.|+ |.|+|+++++||||| |++.||.-+...++|+|
T Consensus 83 cdqdlkkyfds-----lng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglar 149 (292)
T KOG0662|consen 83 CDQDLKKYFDS-----LNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLAR 149 (292)
T ss_pred hhHHHHHHHHh-----cCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhh
Confidence 99999999876 35778899999999999 889999999999999 89999999999999987
No 42
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.65 E-value=3.3e-17 Score=170.05 Aligned_cols=132 Identities=27% Similarity=0.343 Sum_probs=112.1
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|++.+.||+|+||.||.+ ...+++.||||++.+.. ...+.+|+..+..+ +||||+++++++...+..|||||
T Consensus 3 y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 3 FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT-KSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred cEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC-CCCCCccEEEEEEcCCEEEEEEe
Confidence 889999999999998884 55678999999776532 23456788665555 89999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||+ |+|.+++.. ...+++..++.++.|+ |.|||+++|+||||| |++.+|.+++..+++++
T Consensus 82 ~~~g~~L~~~l~~------~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~ 149 (333)
T cd05600 82 YVPGGDFRTLLNN------LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSK 149 (333)
T ss_pred CCCCCCHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCc
Confidence 997 599999976 4568899999999998 889999999999999 88999998888877765
No 43
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.65 E-value=5.4e-17 Score=173.84 Aligned_cols=132 Identities=27% Similarity=0.336 Sum_probs=108.3
Q ss_pred ecccccccCCceEEEeeeec--C---chhHHHHHHH------HHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 411 SNTEIAKGSNGTVVYEGIYE--G---RPVAVKRLVR------ALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 411 ~~~~LG~G~fG~V~~~~~~~--g---~~VAVK~i~~------~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
+.++||+|+||.|+...... + ..||||.... .....+.+|.+.|+. ++|||||++||++.....++||
T Consensus 161 l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~-l~H~NVVr~yGVa~~~~Pl~iv 239 (474)
T KOG0194|consen 161 LGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQ-LNHPNVVRFYGVAVLEEPLMLV 239 (474)
T ss_pred ccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHh-CCCCCEEEEEEEEcCCCccEEE
Confidence 34799999999988743222 1 2389997763 234456788866655 6999999999999999999999
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhhc
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRL 548 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd 548 (549)
||+|+ |+|.++|++.+ ..++..+..+++.++ |+|||++++|||||- |+..++.+++.+++|.|.
T Consensus 240 mEl~~gGsL~~~L~k~~-----~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 240 MELCNGGSLDDYLKKNK-----KSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred EEecCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccC
Confidence 99998 59999999832 358888999999988 999999999999998 999999999999998763
No 44
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.65 E-value=4.1e-17 Score=165.79 Aligned_cols=133 Identities=20% Similarity=0.228 Sum_probs=111.4
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
|++.++||+|+||.||.+ ...+++.||+|.+.... .....+|+..+.. ++||||+++++++...+..|+||||+
T Consensus 7 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~ 85 (288)
T cd07871 7 YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKN-LKHANIVTLHDIIHTERCLTLVFEYL 85 (288)
T ss_pred ceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHh-CCCCCEeeEEEEEcCCCeEEEEEeCC
Confidence 899999999999998884 56788999999876431 2245688876655 49999999999999999999999999
Q ss_pred ccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 484 TCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 484 ~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
.|+|.+++..+ ...+++..+..++.|+ |+|||+++|+||||| |++.+|.+++..+++.+
T Consensus 86 ~~~l~~~l~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~ 151 (288)
T cd07871 86 DSDLKQYLDNC-----GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLAR 151 (288)
T ss_pred CcCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCccee
Confidence 99999998762 2347888889999998 899999999999999 88999988877776654
No 45
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.65 E-value=8.2e-17 Score=167.22 Aligned_cols=142 Identities=22% Similarity=0.210 Sum_probs=110.5
Q ss_pred eeeeecccccccCCceEEEee------eecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc-ce
Q 042769 407 KLFVSNTEIAKGSNGTVVYEG------IYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDK-DF 475 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~~------~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~-~~ 475 (549)
++|++.++||+|+||.||.+. ..+++.||||++... ....+.+|+..+..+.+||||++++++|... ..
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGP 86 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCc
Confidence 348899999999999988742 234678999998642 2345678997777776999999999987754 46
Q ss_pred EEEEecccc-cchhhhhhhcccCC--------------------------------------------------------
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSS-------------------------------------------------------- 498 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~-------------------------------------------------------- 498 (549)
++++||||+ |+|.+++.......
T Consensus 87 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T cd05102 87 LMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDL 166 (338)
T ss_pred eEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccc
Confidence 899999997 69999997632100
Q ss_pred cccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhhc
Q 042769 499 CNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRL 548 (549)
Q Consensus 499 ~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd 548 (549)
....+++..+..++.|+ |+|||+++|+||||| |++.++..++..+++.+.
T Consensus 167 ~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~ 223 (338)
T cd05102 167 WKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARD 223 (338)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccc
Confidence 01246777788889998 899999999999999 888899888888777653
No 46
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.65 E-value=4.4e-17 Score=168.65 Aligned_cols=128 Identities=24% Similarity=0.230 Sum_probs=107.8
Q ss_pred ccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+.||+|+||.||++ +..+|+.||+|++.+. ......+|+..+.. ++||||+++++++...+..|+|||||.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQN-TRHPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh-CCCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 46999999999884 6678999999977643 12345678766555 499999999999999999999999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.+++.. ...+++..+..++.|+ |+|||+++|+||||| |++.+|..++..+++++
T Consensus 80 ~~L~~~l~~------~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~ 143 (323)
T cd05571 80 GELFFHLSR------ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCK 143 (323)
T ss_pred CcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 599999877 4568999999999999 899999999999999 88999998888887765
No 47
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.65 E-value=5.3e-17 Score=170.59 Aligned_cols=132 Identities=23% Similarity=0.213 Sum_probs=111.5
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|+..+.||+|+||.||.+ ...+++.||+|++... ....+.+|+..+.. ++||||+++++.+.+.+.+|||||
T Consensus 3 f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 3 FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVE-ADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred ceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHh-CCCCCEeeEEEEEEcCCEEEEEEe
Confidence 888899999999998884 6678999999977542 22345567765555 499999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||+ |+|.+++.. ...+++..++.++.|+ |+|||+++|+||||| |++.+|+..+..+++++
T Consensus 82 ~~~gg~L~~~l~~------~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~ 149 (360)
T cd05627 82 FLPGGDMMTLLMK------KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCT 149 (360)
T ss_pred CCCCccHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCc
Confidence 998 599999977 4568999999999998 889999999999999 88999998888777654
No 48
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.65 E-value=7e-17 Score=173.10 Aligned_cols=136 Identities=23% Similarity=0.296 Sum_probs=114.7
Q ss_pred CCccceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcc
Q 042769 401 QGRNVGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKD 474 (549)
Q Consensus 401 ~~~~igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~ 474 (549)
+...++. |.+.+.||+|.|++|.+ .+..++..||||.+.+.. .+...+|+++|+.+ +|||||+++.+.+...
T Consensus 51 ~~~~vg~-y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l-~HPnIvkl~~v~~t~~ 128 (596)
T KOG0586|consen 51 DSNSVGL-YVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSL-NHPNIVKLFSVIETEA 128 (596)
T ss_pred ccccccc-eeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhc-CCcceeeeeeeeeecc
Confidence 3445555 99999999999999877 578899999999998763 23467899776655 9999999999999999
Q ss_pred eEEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhh
Q 042769 475 FVYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 475 ~~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
.+|+||||+. |.+++|+.. .+.+.+..++.++.|+ ++|||+++|+||||| |++.+-+-++..+.
T Consensus 129 ~lylV~eya~~ge~~~yl~~------~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfg 200 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVK------HGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFG 200 (596)
T ss_pred eeEEEEEeccCchhHHHHHh------cccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccc
Confidence 9999999996 699999998 5667889999999999 899999999999999 67777665555443
No 49
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.65 E-value=3.6e-17 Score=166.61 Aligned_cols=133 Identities=20% Similarity=0.251 Sum_probs=111.3
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
.|++.+.||+|+||.||.. ...+|+.||+|++... ..+.+.+|+..+.. ++||||+++++++.+....|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKE-VSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHh-CCCCcHhhhHhhhccCCeEEEEE
Confidence 3888899999999998884 5667999999977532 22345678866555 49999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||+. |+|.+++.. .+.+++..+..++.|+ |+|||+++|+||||| |++.+|..++..+++++
T Consensus 81 e~~~~~~L~~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~ 149 (291)
T cd05612 81 EYVPGGELFSYLRN------SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAK 149 (291)
T ss_pred eCCCCCCHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcch
Confidence 9997 599999977 4568889999999998 899999999999999 88899988887777654
No 50
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.64 E-value=7e-17 Score=167.27 Aligned_cols=129 Identities=23% Similarity=0.216 Sum_probs=107.8
Q ss_pred ccccccCCceEEE-eeeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+.||+|+||.||+ .+..+|+.||+|++... ......+|+..+.. ++||||+++++++...+..|+|||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh-CCCCCCcceeeEEecCCEEEEEEeCCCC
Confidence 4699999999988 46678999999977643 12244567755544 599999999999999999999999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhhc
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRL 548 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd 548 (549)
|+|..++.. ...+++..++.++.|+ |+|||+++|+||||| |++.+|.+++..+++.+.
T Consensus 80 ~~L~~~l~~------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~ 144 (323)
T cd05595 80 GELFFHLSR------ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE 144 (323)
T ss_pred CcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhcc
Confidence 599988876 4568999999999999 899999999999999 889999998888887653
No 51
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.64 E-value=2.3e-17 Score=159.49 Aligned_cols=121 Identities=22% Similarity=0.240 Sum_probs=102.0
Q ss_pred ccceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceE
Q 042769 403 RNVGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFV 476 (549)
Q Consensus 403 ~~igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~ 476 (549)
..+.+.|++.++||+|.|+.|+.+ +..+|+.+|+|++... ..+...+|+. +.+.++|||||+|.+.+....+.
T Consensus 7 ~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEar-IC~~LqHP~IvrL~~ti~~~~~~ 85 (355)
T KOG0033|consen 7 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR-ICRKLQHPNIVRLHDSIQEESFH 85 (355)
T ss_pred cccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHH-HHHhcCCCcEeehhhhhccccee
Confidence 345556999999999999976664 7789999999998854 3456678884 45666999999999999999999
Q ss_pred EEEeccccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc
Q 042769 477 YLSLERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 477 yLVmE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
|||+|+|.| +|..-|-. +..++|..+..++.|| |.|+|.++|||||+|
T Consensus 86 ylvFe~m~G~dl~~eIV~------R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvk 137 (355)
T KOG0033|consen 86 YLVFDLVTGGELFEDIVA------REFYSEADASHCIQQILEALAYCHSNGIVHRDLK 137 (355)
T ss_pred EEEEecccchHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCC
Confidence 999999986 87666655 3568999999999999 789999999999999
No 52
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.64 E-value=6.7e-17 Score=165.32 Aligned_cols=134 Identities=19% Similarity=0.181 Sum_probs=111.7
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
.|++.+.||+|+||.||.+ ...+++.||||++.... .....+|+..+.. ++||||+++++++......|+||||
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 6 SYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKG-LKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred cceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhh-CCCCCcCeEEEEEecCCeEEEEEEC
Confidence 3899999999999998884 56688999999886431 2245678866655 4999999999999999999999999
Q ss_pred cccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 483 CTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 483 ~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|.++|.+++... .+.+++..++.++.|+ |+|||+++|+||||| |++.+|..++..+++.+
T Consensus 85 ~~~~l~~~~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 151 (303)
T cd07869 85 VHTDLCQYMDKH-----PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLAR 151 (303)
T ss_pred CCcCHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcce
Confidence 999999988762 3458888999999999 899999999999999 88888988877776543
No 53
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.64 E-value=8.5e-17 Score=166.47 Aligned_cols=132 Identities=23% Similarity=0.274 Sum_probs=109.9
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc-----ceEE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDK-----DFVY 477 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~-----~~~y 477 (549)
|++.+.||+|+||.||.. +..+|+.||||++... ....+.+|+..+.. ++||||+++++++... ...|
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRL-LRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHh-CCCCCEeeecceEeccCCCCCceEE
Confidence 888999999999998884 6678999999987642 22346689866655 5999999999987543 2489
Q ss_pred EEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 478 LSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 478 LVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+|||||.++|.+++.. ...+++..+..++.|+ |.|||+++|+||||| |++.+|.+++..+.+++
T Consensus 81 lv~e~~~~~L~~~l~~------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 81 VVFELMESDLHQVIKA------NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred EEEecCCCCHHHHHHh------cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccc
Confidence 9999999999999876 4568999999999999 899999999999999 88999998888777654
No 54
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.64 E-value=8.3e-17 Score=166.65 Aligned_cols=129 Identities=26% Similarity=0.272 Sum_probs=107.6
Q ss_pred ccccccCCceEEE-eeeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+.||+|+||+||. .+..+|+.||+|++.+. ......+|...+++.++||||+++++++...+..|+|||||.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999888 46678999999977543 122345565556677799999999999999999999999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|..++.. ...+++..+..++.|+ |+|||+++|+||||| |++.+|+.++..+++.+
T Consensus 81 ~~L~~~l~~------~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~ 144 (325)
T cd05604 81 GELFFHLQR------ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCK 144 (325)
T ss_pred CCHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcc
Confidence 599888876 4568999999999999 899999999999999 88999988888777654
No 55
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.63 E-value=1.2e-16 Score=172.55 Aligned_cols=135 Identities=21% Similarity=0.186 Sum_probs=115.6
Q ss_pred ceeeeeecccccccCCceEEEe-eeecCchhHHHHHHH--HHhhhhHHHHHHHHhcCCC-----CCeeEEeeeccCcceE
Q 042769 405 VGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVR--ALHDVAFKEIQNLIASDQH-----PNIVRWYGVENDKDFV 476 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~--~~~~~~~~Ei~~L~~~l~H-----pNIVrl~g~~~~~~~~ 476 (549)
++-+|++.+.||+|+||.|+++ +..+++.||||+++. ....+...|+.+|..+.+| -|+||++++|...+++
T Consensus 184 i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 184 IAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred eEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 4446999999999999999985 788999999999984 3566788898766555324 3899999999999999
Q ss_pred EEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhh
Q 042769 477 YLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLL 543 (549)
Q Consensus 477 yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~ 543 (549)
|||+|++.-+|.++|+.++ ..+++...++.++.|| |.+||+.+|||+||| |+..-+++.+.++
T Consensus 264 ciVfELL~~NLYellK~n~----f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVI 333 (586)
T KOG0667|consen 264 CIVFELLSTNLYELLKNNK----FRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVI 333 (586)
T ss_pred eeeehhhhhhHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEE
Confidence 9999999999999999854 6779999999999999 889999999999999 7777777766544
No 56
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.63 E-value=6.8e-17 Score=168.34 Aligned_cols=133 Identities=26% Similarity=0.277 Sum_probs=112.1
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
.|.+.+.||+|+||.||.+ +..+|+.||||++.... ...+.+|+..+. .++||||+++++++.+.+..|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~-~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILA-DADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHH-hcCCCCccchhhheecCCeEEEEE
Confidence 3888999999999998884 66689999999876532 223556775554 449999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|||. |+|.+++.. ...+++..++.++.|+ |+|||+++|+||||| |++.+|.+++..+++++
T Consensus 81 e~~~~~~L~~~l~~------~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~ 149 (350)
T cd05573 81 EYMPGGDLMNLLIR------KDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCK 149 (350)
T ss_pred cCCCCCCHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCc
Confidence 9997 599999987 4568999999999999 899999999999999 88999998888777664
No 57
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.63 E-value=9.1e-17 Score=166.23 Aligned_cols=129 Identities=27% Similarity=0.271 Sum_probs=107.3
Q ss_pred ccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+.||+|+||+||.. ...+|+.||+|++.+.. ......|...+++.++||||+++++++...+..|+|||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 47999999998884 66789999999776431 22344565556677799999999999999999999999998
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|..++.. ...+++..+..++.|+ |+|||+++|+||||| |++.+|..++..+.+.+
T Consensus 81 g~L~~~l~~------~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~ 144 (323)
T cd05575 81 GELFFHLQR------ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCK 144 (323)
T ss_pred CCHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCc
Confidence 599999876 4568889999999999 899999999999999 88999988888777654
No 58
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.63 E-value=9.9e-17 Score=165.65 Aligned_cols=129 Identities=23% Similarity=0.254 Sum_probs=106.8
Q ss_pred ccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
++||+|+||.||+. ...+++.||||++.... .+....|...+....+||||+++++++...+..|+|||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999998884 56678899999776431 22344566556556699999999999999999999999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.+++.. ...+++..+..++.|+ |.|||+++|+||||| |++.+|..++..+++.+
T Consensus 81 g~L~~~~~~------~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~ 144 (316)
T cd05592 81 GDLMFHIQS------SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCK 144 (316)
T ss_pred CcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCe
Confidence 599999876 4568999999999999 899999999999999 88999988888877664
No 59
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.63 E-value=9.8e-17 Score=166.78 Aligned_cols=134 Identities=19% Similarity=0.160 Sum_probs=109.9
Q ss_pred eeeecccccccCCceEEE-eeeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 408 LFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
.|++.+.||+|+||.||. ....+++.||+|++.+. ....+.+|+..+ ..++|+||+++++++...+.+|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l-~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVL-VNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHH-HhCCCCCCCceEEEEecCCeEEEEE
Confidence 388899999999999887 46677999999987642 122345666544 4459999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|||. |+|.+++... ...+++..+..++.|+ |+|||+++|+||||| |++.+|+.++..+.+.+
T Consensus 81 e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 150 (331)
T cd05597 81 DYYVGGDLLTLLSKF-----EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCL 150 (331)
T ss_pred ecCCCCcHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCcee
Confidence 9997 5999999762 2458889999999998 889999999999999 88899988877776543
No 60
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.63 E-value=1.1e-16 Score=169.26 Aligned_cols=133 Identities=20% Similarity=0.205 Sum_probs=110.4
Q ss_pred eeeeecccccccCCceEEE-eeeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 407 KLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
+.|++.+.||+|+||.||+ ....+++.+|+|.+.+. ....+.+|+. +++.++||||+++++++.+...+|+|
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~-i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERD-IMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHH-HHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 3499999999999999888 46677899999976532 1223456664 44556999999999999999999999
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||||+ |+|.+++.. ..+++.++..++.|+ |+|||+++|+||||| |++.+|.+++..+++++
T Consensus 122 ~Ey~~gg~L~~~l~~-------~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~ 190 (370)
T cd05621 122 MEYMPGGDLVNLMSN-------YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCM 190 (370)
T ss_pred EcCCCCCcHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccce
Confidence 99997 599999865 347888999999998 899999999999999 88999998888777654
No 61
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.63 E-value=8.6e-17 Score=181.38 Aligned_cols=131 Identities=21% Similarity=0.205 Sum_probs=113.2
Q ss_pred eeeecccccccCCceEEE-eeeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 408 LFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
.|.+.++||+|+||.|.. +.+.+++.||+|++++.. ...+++|=+.++...+.+.|++|+..|+++.++|||||
T Consensus 76 DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMd 155 (1317)
T KOG0612|consen 76 DFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMD 155 (1317)
T ss_pred hhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEe
Confidence 399999999999999977 788999999999999741 12344444444555588999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
||+ |||..+|.+ ..++++++++.|...| |.-||+.|+|||||| |+|.+||.++.+++
T Consensus 156 Y~pGGDlltLlSk------~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 156 YMPGGDLLTLLSK------FDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred cccCchHHHHHhh------cCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccch
Confidence 997 599999987 4579999999999999 789999999999999 99999999998764
No 62
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.63 E-value=1.1e-16 Score=165.23 Aligned_cols=129 Identities=26% Similarity=0.252 Sum_probs=106.2
Q ss_pred ccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
++||+|+||.||++ ...+++.||+|++.+. ......+|...+++.++||||+++++++...+..|+|||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999998884 6677899999976532 122345566556677799999999999999999999999998
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|..++.. ...+++..+..++.|+ |+|||+++|+||||| |++.+|.+++..+.+.+
T Consensus 81 ~~L~~~l~~------~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 144 (321)
T cd05603 81 GELFFHLQR------ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCK 144 (321)
T ss_pred CCHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCc
Confidence 599888876 4568889999999998 899999999999999 88999988887776654
No 63
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.63 E-value=1.2e-16 Score=166.09 Aligned_cols=128 Identities=24% Similarity=0.244 Sum_probs=107.3
Q ss_pred ccccccCCceEEE-eeeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+.||+|+||.||+ .+..+|+.||+|++.+. ......+|+..+ +.++||||+++++++...+..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l-~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVL-KNTRHPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH-HhCCCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999988 46778999999977643 123456777555 45599999999999999999999999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.+++.. ...+++..++.++.|+ |+|||+++|+||||| |++.+|.+++..+.+++
T Consensus 80 g~L~~~l~~------~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~ 143 (328)
T cd05593 80 GELFFHLSR------ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCK 143 (328)
T ss_pred CCHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCc
Confidence 599988876 4568899999999999 899999999999999 88999998888777654
No 64
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.63 E-value=1.1e-16 Score=165.52 Aligned_cols=129 Identities=26% Similarity=0.291 Sum_probs=107.9
Q ss_pred ccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+.||+|+||.||++ ...+++.||||++.+.. .....+|...+....+||||+++++++...+.+|+|||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999998884 66778999999776431 22445677666666689999999999999999999999998
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.+++.. ...+++..+..++.|+ |+|||+++|+||||| |++.+|..++..+++.+
T Consensus 81 g~L~~~i~~------~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~ 144 (320)
T cd05590 81 GDLMFHIQK------SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK 144 (320)
T ss_pred chHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCe
Confidence 599999877 4568899999999998 899999999999999 88999988887777654
No 65
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.62 E-value=1.3e-16 Score=166.81 Aligned_cols=132 Identities=27% Similarity=0.339 Sum_probs=109.1
Q ss_pred eeecccccccCCceEEEe-eeec-CchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYE-GRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~-g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
|++.+.||+|+||.||.+ ...+ +..||+|++.+. ..+.+.+|+..+ +.++||||+++++++...+..|+||
T Consensus 32 y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l-~~l~hp~Iv~~~~~~~~~~~~~lv~ 110 (340)
T PTZ00426 32 FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKIL-NYINHPFCVNLYGSFKDESYLYLVL 110 (340)
T ss_pred cEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHH-HhCCCCCCcceEEEEEeCCEEEEEE
Confidence 999999999999998875 3333 368999966432 233456788555 4459999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|||. |+|.+++.. ...+++..+..++.|+ |.|||+++|+||||| |++.+|..++..+++++
T Consensus 111 Ey~~~g~L~~~i~~------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~ 179 (340)
T PTZ00426 111 EFVIGGEFFTFLRR------NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAK 179 (340)
T ss_pred eCCCCCcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCe
Confidence 9997 699999987 4568899999999998 889999999999999 88999988887777654
No 66
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.62 E-value=1.3e-16 Score=165.62 Aligned_cols=129 Identities=22% Similarity=0.193 Sum_probs=107.9
Q ss_pred ccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
++||+|+||.||.+ ...+++.||+|++.+.. .....+|...+..+.+||||+++++++......|+|||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999998874 66788999999877532 22355677666666689999999999999999999999998
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.+++.. .+.+++..++.++.|+ |.|||+++|+||||| |++.+|..++..+.+.+
T Consensus 81 g~L~~~~~~------~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~ 144 (329)
T cd05588 81 GDLMFHMQR------QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCK 144 (329)
T ss_pred CCHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCcccc
Confidence 599988876 4579999999999999 889999999999999 88889888877776654
No 67
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.62 E-value=1.3e-16 Score=164.99 Aligned_cols=129 Identities=25% Similarity=0.254 Sum_probs=107.2
Q ss_pred ccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
++||+|+||.||.+ ...+++.||||++.+.. ......|...+....+||||+++++++...+..|+|||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999998884 56678999999776531 22345677666666689999999999999999999999998
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|..++.. ...+++..+..++.|+ |.|||+++|+||||| |++.+|..++..+++.+
T Consensus 81 ~~L~~~l~~------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~ 144 (321)
T cd05591 81 GDLMFQIQR------SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCK 144 (321)
T ss_pred CcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccce
Confidence 599998876 4568889999999998 889999999999999 88999988887777654
No 68
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.62 E-value=1.7e-16 Score=164.96 Aligned_cols=134 Identities=19% Similarity=0.179 Sum_probs=109.0
Q ss_pred eeeecccccccCCceEEE-eeeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 408 LFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
.|++.+.||+|+||.||+ +...+++.||+|++.+. ....+..|.. ++..++|+||+++++++...+..|+||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~-~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERN-VLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHH-HHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 388899999999999888 46677899999976542 1122445554 445559999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|||. |+|.+++... ...+++..+..++.|+ |+|||+++|+||||| |++.+|..++..+++++
T Consensus 81 Ey~~gg~L~~~l~~~-----~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~ 150 (331)
T cd05624 81 DYYVGGDLLTLLSKF-----EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCL 150 (331)
T ss_pred eCCCCCcHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEecccee
Confidence 9997 5999999762 2468888999999998 889999999999999 88899988877776653
No 69
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.62 E-value=2.2e-16 Score=160.16 Aligned_cols=134 Identities=25% Similarity=0.192 Sum_probs=109.4
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|+..+.||+|+||.||+. ...+|+.||+|.+.... .....+|+..+.. ++|+||+++++++...+..+++||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~-l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEK-VNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHh-cCCCcEEEEEEEEccCCeEEEEEE
Confidence 677889999999998884 66789999999765431 1235578865544 599999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||. |+|.+++.... ...+++..+..++.|+ |+|||+++|+||||| |++.++.+++..+++++
T Consensus 81 ~~~~g~L~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~ 150 (285)
T cd05631 81 IMNGGDLKFHIYNMG----NPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAV 150 (285)
T ss_pred ecCCCcHHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcE
Confidence 997 59988876522 3458888999999998 889999999999999 88888888877776654
No 70
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.62 E-value=1.5e-16 Score=164.65 Aligned_cols=129 Identities=26% Similarity=0.243 Sum_probs=106.0
Q ss_pred ccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+.||+|+||.||++ +..+++.||+|++.+.. .....+|...+++.++||||+++++++...+..|+|||||.
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 47999999998884 66678899999775431 12334555455666799999999999999999999999998
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.+++.. ...+.+..++.++.|+ |+|||+++|+||||| |++.+|..++..+++++
T Consensus 81 ~~L~~~~~~------~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~ 144 (325)
T cd05602 81 GELFYHLQR------ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK 144 (325)
T ss_pred CcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCc
Confidence 599999876 4568888899999998 889999999999999 88999988888877654
No 71
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.62 E-value=1.4e-16 Score=164.02 Aligned_cols=126 Identities=26% Similarity=0.198 Sum_probs=105.1
Q ss_pred ccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-cc
Q 042769 415 IAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-CS 486 (549)
Q Consensus 415 LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-Gs 486 (549)
||+|+||.||++ +..+++.||+|++.+. ......+|+..+.. ++||||+++++++...+..|+|||||+ |+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQ-VNCPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-CCCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 799999998884 6667899999977543 22345678866655 499999999999999999999999997 59
Q ss_pred hhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 487 LDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 487 L~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|.+++.. .+.+++..+..++.|+ |.|||+++|+||||| |++.+|.+++..+.+++
T Consensus 80 L~~~l~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~ 141 (312)
T cd05585 80 LFHHLQR------EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCK 141 (312)
T ss_pred HHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccc
Confidence 9999977 4568899999999998 889999999999999 88899988887776654
No 72
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.62 E-value=1.5e-16 Score=164.22 Aligned_cols=129 Identities=25% Similarity=0.250 Sum_probs=108.0
Q ss_pred ccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
++||+|+||.||+. ...+|+.||+|++.+.. ......|...+....+||||+++++++...+.+|+|||||.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 47999999998884 66788999999776532 22345676666666799999999999999999999999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.+++.. ...+++..+..++.|+ |+|||+++|+||||| |++.+|..++..+++.+
T Consensus 81 g~L~~~i~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~ 144 (316)
T cd05620 81 GDLMFHIQD------KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCK 144 (316)
T ss_pred CcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCe
Confidence 599999876 4568889999999999 899999999999999 88999988888777654
No 73
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.62 E-value=1.4e-16 Score=165.59 Aligned_cols=129 Identities=21% Similarity=0.190 Sum_probs=108.7
Q ss_pred ccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+.||+|+||.||.. ...+++.||+|++.+.. .....+|+..+....+||||+++++++...+..|+|||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 47999999998884 66778999999776532 22355777667677799999999999999999999999998
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|..++.. ...+++..++.++.|+ |+|||+++|+||||| |++.+|+.++..+++.+
T Consensus 81 ~~L~~~~~~------~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~ 144 (329)
T cd05618 81 GDLMFHMQR------QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 144 (329)
T ss_pred CCHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccc
Confidence 599888876 4568999999999998 899999999999999 88999998888777654
No 74
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.62 E-value=1.8e-16 Score=169.04 Aligned_cols=129 Identities=18% Similarity=0.108 Sum_probs=111.3
Q ss_pred eeeecccccccCCceEEE-eeeecCchhHHHHHHHHHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccccc
Q 042769 408 LFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCTCS 486 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~Gs 486 (549)
.|++.+.||+|+||.||. .+..+++.||+|.... ....+|++.|.. ++|||||++++++......+++||++.++
T Consensus 93 ~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~~~~~E~~il~~-l~HpnIv~~~~~~~~~~~~~lv~e~~~~~ 168 (391)
T PHA03212 93 GFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---GGTATEAHILRA-INHPSIIQLKGTFTYNKFTCLILPRYKTD 168 (391)
T ss_pred CcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---hhhHHHHHHHHh-CCCCCCCCEeEEEEECCeeEEEEecCCCC
Confidence 399999999999999888 4778899999997653 346789966655 59999999999999999999999999999
Q ss_pred hhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 487 LDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 487 L~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|.+++.. ...+++..++.++.|+ |+|||+++|+||||| |++.+|..++..++++
T Consensus 169 L~~~l~~------~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a 229 (391)
T PHA03212 169 LYCYLAA------KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAA 229 (391)
T ss_pred HHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcc
Confidence 9999876 4568888999999999 899999999999999 8888898887777665
No 75
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.62 E-value=1.6e-16 Score=168.00 Aligned_cols=131 Identities=21% Similarity=0.164 Sum_probs=109.4
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|++.+.||+|+||.||+ .+..+++.||+|++.+. ....+.+|+..+ +.++||||+++++++.+....|+|||
T Consensus 45 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il-~~~~h~~iv~~~~~~~~~~~~~lv~E 123 (370)
T cd05596 45 FDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIM-AHANSEWIVQLHYAFQDDKYLYMVME 123 (370)
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHH-HhCCCCCcceEEEEEecCCEEEEEEc
Confidence 99999999999999888 46678999999977542 122345677554 55599999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||+ |+|.+++.. ..+++.++..++.|+ |+|||+++|+||||| |++.+|.+++..+++.+
T Consensus 124 y~~gg~L~~~l~~-------~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~ 190 (370)
T cd05596 124 YMPGGDLVNLMSN-------YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (370)
T ss_pred CCCCCcHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEecccee
Confidence 997 599999865 347888999999888 899999999999999 88999998888776654
No 76
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.61 E-value=2e-16 Score=164.01 Aligned_cols=133 Identities=20% Similarity=0.179 Sum_probs=110.6
Q ss_pred eeecccccccCCceEEEee----eecCchhHHHHHHHH-------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEE
Q 042769 409 FVSNTEIAKGSNGTVVYEG----IYEGRPVAVKRLVRA-------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVY 477 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~----~~~g~~VAVK~i~~~-------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~y 477 (549)
|++.+.||+|+||.||+.. ..+++.||+|++.+. ..+...+|+..+..+.+||||+++++++...+.+|
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 7888999999999988732 346889999976532 12245577766766657999999999999999999
Q ss_pred EEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 478 LSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+|||||. |+|.+++.. ...+++..+..++.|+ |+|||+++|+||||| |++.+|.+++.++.+.+
T Consensus 82 lv~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 82 LILDYVSGGEMFTHLYQ------RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEeCCCCCcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 9999997 599999876 4568899999999998 899999999999999 88999988888777665
No 77
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.61 E-value=2.3e-16 Score=163.23 Aligned_cols=133 Identities=23% Similarity=0.215 Sum_probs=109.3
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|++.+.||+|+||.||++ ...+++.||||++.+. ..+....|...+.....|++|+++++++...+.+|+|||
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 788899999999998884 5667889999977643 123455677666555445678999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||+ |+|.+++.. ...+++..+..++.|+ |+|||+++|+||||| |++.+|..++..+++.+
T Consensus 82 ~~~~g~L~~~~~~------~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~ 149 (324)
T cd05587 82 YVNGGDLMYHIQQ------VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCK 149 (324)
T ss_pred CCCCCcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcce
Confidence 997 599999876 4568889999999998 899999999999999 88999988888777654
No 78
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.61 E-value=1.8e-16 Score=167.83 Aligned_cols=133 Identities=20% Similarity=0.195 Sum_probs=109.5
Q ss_pred eeeeecccccccCCceEEE-eeeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 407 KLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
+.|++.+.||+|+||.||+ .+..+++.+|+|++.+. ....+.+|+. +++.++||||+++++++......|+|
T Consensus 43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~-i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (371)
T cd05622 43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD-IMAFANSPWVVQLFYAFQDDRYLYMV 121 (371)
T ss_pred hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHH-HHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 4499999999999999888 46678899999976532 1223446664 44556999999999999999999999
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||||+ |+|.+++.. ..+++.++..++.|+ |+|||+++|+||||| |++.+|+.++..+++.+
T Consensus 122 ~Ey~~gg~L~~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 122 MEYMPGGDLVNLMSN-------YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred EcCCCCCcHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 99997 599999865 347888899999998 889999999999999 88999988877776654
No 79
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.61 E-value=1.8e-16 Score=164.31 Aligned_cols=133 Identities=23% Similarity=0.233 Sum_probs=110.2
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|+..+.||+|+||.||++ ...+|+.||+|++.+.. ......|...+....+|++|+++++++...+.+|+|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 677889999999999884 66789999999776431 22345677666666567889999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||+ |+|.+++.. ...+++..++.++.|+ |+|||+++|+||||| |++.+|..++..+++.+
T Consensus 82 y~~~g~L~~~i~~------~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~ 149 (323)
T cd05615 82 YVNGGDLMYHIQQ------VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCK 149 (323)
T ss_pred CCCCCcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEecccccc
Confidence 997 599999877 4568999999999999 889999999999999 88999988877776644
No 80
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.61 E-value=2e-16 Score=163.90 Aligned_cols=134 Identities=22% Similarity=0.238 Sum_probs=111.1
Q ss_pred eeeecccccccCCceEEE-eeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 408 LFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
.|.+.+.||+|+||.||+ ....+|+.||+|++.... ...+.+|+. +++.++||||+++++++...+..|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~-i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERD-ILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHH-HHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 388899999999999888 466789999999776532 223445664 445569999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|||+ |+|.+++..+ ...+++..++.++.|+ |.|||+++|+||||| |++.+|..++..+.+++
T Consensus 81 e~~~~~~L~~~l~~~-----~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~ 150 (330)
T cd05601 81 EYQPGGDLLSLLNRY-----EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAA 150 (330)
T ss_pred CCCCCCCHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCe
Confidence 9997 5999999872 2468999999999998 889999999999999 88999988887777654
No 81
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.61 E-value=2.5e-16 Score=166.79 Aligned_cols=122 Identities=27% Similarity=0.347 Sum_probs=106.6
Q ss_pred CccceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHHHh------hhhHHHHHHHHhcCCCCCeeEEeeeccCcc
Q 042769 402 GRNVGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRALH------DVAFKEIQNLIASDQHPNIVRWYGVENDKD 474 (549)
Q Consensus 402 ~~~igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~~------~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~ 474 (549)
...+...|++.+.||+|.||.||.+ .+.+|+.+|+|.+.+... ....+|+.+|..+-.|||||.++++|++..
T Consensus 30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~ 109 (382)
T KOG0032|consen 30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD 109 (382)
T ss_pred cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC
Confidence 3455666999999999999998884 677899999998876532 467799988877755999999999999999
Q ss_pred eEEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc
Q 042769 475 FVYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 475 ~~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
.+|+|||+|. |.|++.|.. . .+++..+..++.|+ +.|||+.||+|||||
T Consensus 110 ~~~lvmEL~~GGeLfd~i~~------~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlK 162 (382)
T KOG0032|consen 110 SVYLVMELCEGGELFDRIVK------K-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLK 162 (382)
T ss_pred eEEEEEEecCCchHHHHHHH------c-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCC
Confidence 9999999998 599999987 2 39999999999999 889999999999999
No 82
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.61 E-value=2.5e-16 Score=162.96 Aligned_cols=133 Identities=23% Similarity=0.230 Sum_probs=110.7
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|.+.+.||+|+||.||++ ...+++.||||++.+.. ......|...+.....|++|+++++++...+.+|+|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 778899999999998884 66678899999766431 12344566556666578999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||+ |+|.+++.. ...+++..+..++.|+ |+|||+++|+||||| |++.+|++++..+++.+
T Consensus 82 ~~~~g~L~~~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~ 149 (323)
T cd05616 82 YVNGGDLMYQIQQ------VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 149 (323)
T ss_pred CCCCCCHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCce
Confidence 997 699999876 4568899999999999 899999999999999 89999998888777654
No 83
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.61 E-value=2.3e-16 Score=157.57 Aligned_cols=137 Identities=23% Similarity=0.230 Sum_probs=116.5
Q ss_pred ccceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcce
Q 042769 403 RNVGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDF 475 (549)
Q Consensus 403 ~~igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~ 475 (549)
..+.+ |...++||+|.||+|.+ +.+.+++.+|+|+++++. ....+.|-+.|... +||.+..|-..|+.++.
T Consensus 165 vTm~d-FdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~-~HPFLt~LKYsFQt~dr 242 (516)
T KOG0690|consen 165 VTMED-FDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC-RHPFLTSLKYSFQTQDR 242 (516)
T ss_pred eccch-hhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhc-cCcHHHHhhhhhccCce
Confidence 34455 99999999999999988 578899999999999862 12234555455555 99999999999999999
Q ss_pred EEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+|+||||++ |.|+-.|.+ ...++++.++.+-..| |.|||+++||.|||| |+|.+||.++..++|-+
T Consensus 243 lCFVMeyanGGeLf~HLsr------er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCK 316 (516)
T KOG0690|consen 243 LCFVMEYANGGELFFHLSR------ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCK 316 (516)
T ss_pred EEEEEEEccCceEeeehhh------hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccch
Confidence 999999998 599888877 5679999999999988 889999999999999 79999999999888753
No 84
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.60 E-value=2.5e-16 Score=162.97 Aligned_cols=132 Identities=23% Similarity=0.271 Sum_probs=107.3
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHH--HhcCCCCCeeEEeeeccCcceEEEE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNL--IASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L--~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
|.+.+.||+|+||.||.. ...+++.||||++.+.. .+...+|+..+ ++.++||||+++++++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567889999999998884 66789999999776431 22344555433 3455899999999999999999999
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||||. |+|..+++. ..+++..+..++.|+ |+|||+++|+||||| |++.+|..++..+++.+
T Consensus 81 ~E~~~~~~L~~~~~~-------~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~ 149 (324)
T cd05589 81 MEYAAGGDLMMHIHT-------DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCK 149 (324)
T ss_pred EcCCCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCc
Confidence 99998 599888754 458999999999999 889999999999999 88999988877776543
No 85
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.60 E-value=2.5e-16 Score=163.20 Aligned_cols=137 Identities=23% Similarity=0.300 Sum_probs=116.9
Q ss_pred CccceeeeeecccccccCCceEEEeeeecCchhHHHHHHHHHhhhhHHHHHHHHh-cCCCCCeeEEeeeccCcc----eE
Q 042769 402 GRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQNLIA-SDQHPNIVRWYGVENDKD----FV 476 (549)
Q Consensus 402 ~~~igk~y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~~-~l~HpNIVrl~g~~~~~~----~~ 476 (549)
.+.|++...+.+.||+|.||+ ++++.+.|+.||||++.......+++|.++.+. .++|+||..+++.-..+. .+
T Consensus 206 QRTiarqI~L~e~IGkGRyGE-VwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 206 QRTIARQIVLQEIIGKGRFGE-VWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred HHhhhheeEEEEEecCccccc-eeeccccCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence 457788899999999999999 678999999999999997777788888776554 459999999998866543 58
Q ss_pred EEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccc--------eeEEEeecc----ccccCCCCch
Q 042769 477 YLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDS--------VKVIIRDLS----LWKADGHPSP 540 (549)
Q Consensus 477 yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~--------~~IIHRDLK----Ll~~~G~p~~ 540 (549)
|||.+|.+ |||+|||.+ ..++.....++++.+ |+|||. -.|.||||| |++.||..-+
T Consensus 285 wLvTdYHe~GSL~DyL~r-------~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~I 357 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNR-------NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 357 (513)
T ss_pred EEeeecccCCcHHHHHhh-------ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEE
Confidence 99999997 999999987 458888888888877 999992 259999999 9999999999
Q ss_pred hhhhhh
Q 042769 541 LLLSLM 546 (549)
Q Consensus 541 ~l~~Lm 546 (549)
.+|+|+
T Consensus 358 ADLGLA 363 (513)
T KOG2052|consen 358 ADLGLA 363 (513)
T ss_pred eeceee
Confidence 988875
No 86
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.60 E-value=2.9e-16 Score=162.56 Aligned_cols=128 Identities=25% Similarity=0.259 Sum_probs=105.7
Q ss_pred ccccccCCceEEE-eeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+.||+|+||.||. .+..+|+.||+|++.+.. .....+|++.+ ..++||||+++++++...+..|||||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l-~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL-QNSRHPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH-HhCCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999988 466789999999776431 22345677555 44599999999999999999999999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccc-eeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDS-VKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~-~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|..++.. ...+++..+..++.|+ |+|||+ ++|+||||| |++.+|.+++..+.+.+
T Consensus 80 ~~L~~~l~~------~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~ 144 (325)
T cd05594 80 GELFFHLSR------ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 144 (325)
T ss_pred CcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCe
Confidence 599988876 4568999999999999 899997 899999999 88999988888777654
No 87
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.60 E-value=1.4e-16 Score=166.95 Aligned_cols=123 Identities=27% Similarity=0.370 Sum_probs=107.1
Q ss_pred CccceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcce
Q 042769 402 GRNVGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDF 475 (549)
Q Consensus 402 ~~~igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~ 475 (549)
.-+|.-+|.+.+.||+|.|+.|-+ ++.++|..||||++.+.. ...+++|++. +++.+||||||||++......
T Consensus 13 DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRC-MKLVQHpNiVRLYEViDTQTK 91 (864)
T KOG4717|consen 13 DGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRC-MKLVQHPNIVRLYEVIDTQTK 91 (864)
T ss_pred ccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHH-HHHhcCcCeeeeeehhcccce
Confidence 345666799999999999996555 689999999999998763 3357789955 467799999999999999999
Q ss_pred EEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
+|||+|+-. |+|++||-++ ...+.++.+..|++|| +.|||+..+||||||
T Consensus 92 lyLiLELGD~GDl~DyImKH-----e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLK 145 (864)
T KOG4717|consen 92 LYLILELGDGGDLFDYIMKH-----EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLK 145 (864)
T ss_pred EEEEEEecCCchHHHHHHhh-----hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCC
Confidence 999999997 6999999884 3579999999999999 789999999999999
No 88
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.60 E-value=3.2e-16 Score=161.98 Aligned_cols=129 Identities=24% Similarity=0.238 Sum_probs=106.5
Q ss_pred ccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+.||+|+||.||.. ...+++.||||++.... ......|...+....+||||+++++++.+.+.+|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 47999999998884 56678899999776531 22345566566666799999999999999999999999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.+++.. ...+++..+..++.|+ |.|||+++|+||||| |++.+|..++..+++.+
T Consensus 81 g~L~~~l~~------~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~ 144 (316)
T cd05619 81 GDLMFHIQS------CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCK 144 (316)
T ss_pred CcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcce
Confidence 599999976 4468888999999998 889999999999999 88899988877776654
No 89
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.60 E-value=5e-16 Score=165.45 Aligned_cols=135 Identities=18% Similarity=0.152 Sum_probs=112.8
Q ss_pred cceeeeeecccccccCCceEEEe---eeecCchhHHHHHHHHHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 404 NVGKLFVSNTEIAKGSNGTVVYE---GIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 404 ~igk~y~~~~~LG~G~fG~V~~~---~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
.+...|.+.+.||+|+||.||.+ +..+++.||+|.+... ....+|+..|.. ++|||||++++++......|++|
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--~~~~~E~~il~~-l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--KTPGREIDILKT-ISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--ccHHHHHHHHHh-cCCCCccceeeeEeeCCEEEEEe
Confidence 34445999999999999998874 2345688999987643 335678866655 49999999999999999999999
Q ss_pred cccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|++.++|.+++.. ...+++..++.++.|+ |.|||+++|+||||| |++.+|.+.+..+.+.+
T Consensus 166 e~~~~~l~~~l~~------~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~ 233 (392)
T PHA03207 166 PKYKCDLFTYVDR------SGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAAC 233 (392)
T ss_pred hhcCCCHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCcccc
Confidence 9999999999855 4578999999999999 889999999999999 88999988888777654
No 90
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.60 E-value=2.6e-16 Score=166.67 Aligned_cols=141 Identities=21% Similarity=0.162 Sum_probs=110.6
Q ss_pred eeeecccccccCCceEEEee------eecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEE
Q 042769 408 LFVSNTEIAKGSNGTVVYEG------IYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVY 477 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~~------~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~y 477 (549)
.|++.+.||+|+||.||.+. ..++..||||+++.. ..+.+.+|+..|..+.+||||++++++|...+..+
T Consensus 36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~ 115 (375)
T cd05104 36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTL 115 (375)
T ss_pred HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcce
Confidence 38889999999999987642 234668999988642 23356789977766658999999999999999999
Q ss_pred EEecccc-cchhhhhhhcccC-----------------------------------------------------------
Q 042769 478 LSLERCT-CSLDDLIQTYSDS----------------------------------------------------------- 497 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~----------------------------------------------------------- 497 (549)
+|||||+ |+|.++++.....
T Consensus 116 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (375)
T cd05104 116 VITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYI 195 (375)
T ss_pred eeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceec
Confidence 9999997 6999999753210
Q ss_pred ----------CcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhhc
Q 042769 498 ----------SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRL 548 (549)
Q Consensus 498 ----------~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd 548 (549)
.....+++..+..++.|+ |+|||+++|+||||| |++.++.+++..+++++.
T Consensus 196 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 263 (375)
T cd05104 196 DQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARD 263 (375)
T ss_pred ccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCcccee
Confidence 001246677788888898 899999999999999 788888887777777653
No 91
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.60 E-value=4e-16 Score=161.89 Aligned_cols=129 Identities=22% Similarity=0.182 Sum_probs=107.9
Q ss_pred ccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+.||+|+||.||+. ...+++.||+|++.+.. ...+.+|...+....+||||+++++++.....+|+|||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999998884 56778999999877532 22355777666677689999999999999999999999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|..++.. .+.+++..++.++.|+ |+|||+++|+||||| |++.+|+.++..+.+.+
T Consensus 81 ~~L~~~~~~------~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~ 144 (327)
T cd05617 81 GDLMFHMQR------QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCK 144 (327)
T ss_pred CcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccce
Confidence 599988876 4568999999999998 899999999999999 88999988877776543
No 92
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.59 E-value=1.2e-16 Score=162.57 Aligned_cols=138 Identities=23% Similarity=0.227 Sum_probs=106.6
Q ss_pred CCccceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHHHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcc-----
Q 042769 401 QGRNVGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNIVRWYGVENDKD----- 474 (549)
Q Consensus 401 ~~~~igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~----- 474 (549)
.+....-.|...+++|.|+||.||.. ...+++.||||+.... ....-+|++.|. .++|||||+|..+|....
T Consensus 18 ~~~~~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d-~r~knrEl~im~-~l~HpNIV~L~~~f~~~~~~d~~ 95 (364)
T KOG0658|consen 18 DGKKVEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQD-KRYKNRELQIMR-KLDHPNIVRLLYFFSSSTESDEV 95 (364)
T ss_pred CCcceEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCC-CCcCcHHHHHHH-hcCCcCeeeEEEEEEecCCCchh
Confidence 34445555888999999999988874 4566899999987754 234458887776 559999999988875322
Q ss_pred eEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccC-CCCchhh
Q 042769 475 FVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKAD-GHPSPLL 542 (549)
Q Consensus 475 ~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~-G~p~~~l 542 (549)
+..+||||++-+|.++++.+. ..+..++...++.++.|+ |.|||+.+|+||||| |+|.+ |.-++.+
T Consensus 96 ~lnlVleymP~tL~~~~r~~~--~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicD 169 (364)
T KOG0658|consen 96 YLNLVLEYMPETLYRVIRHYT--RANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICD 169 (364)
T ss_pred HHHHHHHhchHHHHHHHHHHh--hcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEecc
Confidence 356899999999999998632 124678899999999999 999999999999999 66655 5444433
No 93
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.59 E-value=4.2e-16 Score=161.00 Aligned_cols=129 Identities=24% Similarity=0.254 Sum_probs=106.9
Q ss_pred ccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+.||+|+||+||.. ...+++.||||++.+.. .....+|...+....+||||+++++++...+.+|+|||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999998874 56678899999776531 22345677666555589999999999999999999999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|..++.. ...+++..+..++.|+ |.|||+++|+||||| |++.+|.+++..+.+.+
T Consensus 81 ~~L~~~~~~------~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 144 (318)
T cd05570 81 GDLMFHIQR------SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCK 144 (318)
T ss_pred CCHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCe
Confidence 599988876 4568999999999999 889999999999999 88999988887777654
No 94
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.59 E-value=4.4e-16 Score=160.62 Aligned_cols=128 Identities=25% Similarity=0.244 Sum_probs=105.2
Q ss_pred ccccccCCceEEEe-e---eecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 413 TEIAKGSNGTVVYE-G---IYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~---~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
+.||+|+||.||.. . ..+|+.||+|++.... .....+|+..+.. ++||||+++++++...+..|+|||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAE-VNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHh-CCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 57999999998873 2 3568999999776432 2245578865544 49999999999999999999999999
Q ss_pred c-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 484 T-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 484 ~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
. |+|.+++.. ...+++..++.++.|+ |.|||+++|+||||| |++.+|.+++..+.+.+
T Consensus 81 ~~~~L~~~l~~------~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 146 (318)
T cd05582 81 RGGDLFTRLSK------EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK 146 (318)
T ss_pred CCCcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCc
Confidence 7 699999876 4568999999999999 899999999999999 88889888777766543
No 95
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.59 E-value=6e-16 Score=157.03 Aligned_cols=134 Identities=25% Similarity=0.209 Sum_probs=108.6
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|+..+.||+|+||+||. .+..+++.||+|.+.... .....+|+..+..+ +||||+++++++...+..|+|||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-CCCCEeeeeeeecCCCeEEEEEe
Confidence 77889999999999888 456679999999776431 12345788665554 99999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||. |+|.+++.... ...+++..+..++.|+ |.|||+++++||||| |++.+|...+..+.+.+
T Consensus 81 ~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~ 150 (285)
T cd05605 81 LMNGGDLKFHIYNMG----NPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAV 150 (285)
T ss_pred ccCCCcHHHHHHhcC----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCce
Confidence 997 59988886522 3458899999999999 889999999999999 78888887776665543
No 96
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.59 E-value=1.8e-16 Score=167.21 Aligned_cols=135 Identities=18% Similarity=0.283 Sum_probs=113.3
Q ss_pred eeeecccccccCCceEEE-eeeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcce-EEEEe
Q 042769 408 LFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDF-VYLSL 480 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~-~yLVm 480 (549)
.|...+++|+|+||.+++ +++.++..+++|.|... ....+.+|+.. ++.++|||||.+++.|..++. .+|+|
T Consensus 5 ~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~l-is~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 5 NYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDL-LSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred hhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHH-HHhccCCCeeeeccchhcCCceEEEEE
Confidence 488999999999999877 68888899999987743 23356788855 455799999999999999988 99999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+||+ |+|.+.|.+.+ ...++++.+..++.|+ +.|||+++|+||||| ++..++..++-.++|++
T Consensus 84 ~Y~eGg~l~~~i~~~k----~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK 154 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK----GVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAK 154 (426)
T ss_pred eecCCCCHHHHHHHHh----hccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhh
Confidence 9998 59999998844 4679999999999999 889999999999999 77777777766666543
No 97
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.59 E-value=4.8e-16 Score=154.72 Aligned_cols=137 Identities=23% Similarity=0.246 Sum_probs=114.8
Q ss_pred eeecccccccCCceEEEee-eec----CchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccC-cceEE
Q 042769 409 FVSNTEIAKGSNGTVVYEG-IYE----GRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVEND-KDFVY 477 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~-~~~----g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~-~~~~y 477 (549)
|+....||+|.||.||++. ..+ ...+|+|.++.+ .+..+.||+ .|.+.++|||||.|..+|.. +..++
T Consensus 26 ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREi-aL~REl~h~nvi~Lv~Vfl~~d~~v~ 104 (438)
T KOG0666|consen 26 YEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREI-ALLRELKHPNVISLVKVFLSHDKKVW 104 (438)
T ss_pred hhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHH-HHHHHhcCCcchhHHHHHhccCceEE
Confidence 8888999999999999852 222 238999999965 355788999 45555599999999999887 77899
Q ss_pred EEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccC----CCCchhhhhhh
Q 042769 478 LSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKAD----GHPSPLLLSLM 546 (549)
Q Consensus 478 LVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~----G~p~~~l~~Lm 546 (549)
|++||.+-+|.+.|+.++.... ..++...+..++.|| +.|||++-|+||||| |+-.+ |..++.+++|.
T Consensus 105 l~fdYAEhDL~~II~fHr~~~~-~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGla 183 (438)
T KOG0666|consen 105 LLFDYAEHDLWHIIKFHRASKA-KQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLA 183 (438)
T ss_pred EEehhhhhhHHHHHHHhccchh-ccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHH
Confidence 9999999999999998775433 578999999999999 789999999999999 66666 88888888887
Q ss_pred h
Q 042769 547 R 547 (549)
Q Consensus 547 r 547 (549)
|
T Consensus 184 R 184 (438)
T KOG0666|consen 184 R 184 (438)
T ss_pred H
Confidence 6
No 98
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.59 E-value=6.5e-16 Score=160.56 Aligned_cols=133 Identities=19% Similarity=0.159 Sum_probs=107.9
Q ss_pred eeeecccccccCCceEEE-eeeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 408 LFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
.|++.++||+|+||.||. ....+++.+|+|++.+. ....+.+|+..+ ..++|+||+++++++.+.+..|+||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l-~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVL-VNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHH-hhCCCCCEeeEEEEEecCCEEEEEE
Confidence 388899999999999887 45667888999977542 112244566444 4559999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|||. |+|.+++... ...+++..++.++.|+ |+|||+++|+||||| |++.+|+.++.++++.
T Consensus 81 ey~~~g~L~~~l~~~-----~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a 149 (332)
T cd05623 81 DYYVGGDLLTLLSKF-----EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSC 149 (332)
T ss_pred eccCCCcHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchh
Confidence 9997 6999999762 2458888899999998 889999999999999 8888998887777654
No 99
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.59 E-value=3.8e-16 Score=164.87 Aligned_cols=132 Identities=19% Similarity=0.240 Sum_probs=110.9
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcc-----eEE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKD-----FVY 477 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~-----~~y 477 (549)
|++.+.||+|+||.||.. +..+|+.||||++... ....+.+|+..+..+ +||||+++++++...+ ..|
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFF-KHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhC-CCCCcCCHhheecCCCccccceEE
Confidence 678899999999998874 5678999999987532 234567888666554 9999999999998776 799
Q ss_pred EEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 478 LSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 478 LVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+||||+.++|.+++.. ...+++..++.++.|+ |+|||+++|+||||| |++.+|..++..+.+++
T Consensus 81 lv~e~~~~~l~~~~~~------~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~ 151 (372)
T cd07853 81 VVTELMQSDLHKIIVS------PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR 151 (372)
T ss_pred EEeeccccCHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEecccccee
Confidence 9999999999988866 4568999999999999 899999999999999 88999988887777654
No 100
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.59 E-value=4.7e-16 Score=159.50 Aligned_cols=133 Identities=19% Similarity=0.211 Sum_probs=110.1
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
|.+.+.||+|+||.||. ....+++.||+|.+.... .....+|+..+.. ++||||+++++++..++..|+||||+
T Consensus 8 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~ 86 (309)
T cd07872 8 YIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKD-LKHANIVTLHDIVHTDKSLTLVFEYL 86 (309)
T ss_pred eEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHh-CCCCCcceEEEEEeeCCeEEEEEeCC
Confidence 88999999999999887 456678899999876432 2245678866555 49999999999999999999999999
Q ss_pred ccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 484 TCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 484 ~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
.++|.+++... ...+++..+..++.|+ |+|||+++|+||||| |++.+|.+++..+.+++
T Consensus 87 ~~~l~~~~~~~-----~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 152 (309)
T cd07872 87 DKDLKQYMDDC-----GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLAR 152 (309)
T ss_pred CCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccce
Confidence 99999988762 2357888888899898 899999999999999 88888888777766543
No 101
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.59 E-value=4.2e-16 Score=161.40 Aligned_cols=128 Identities=27% Similarity=0.254 Sum_probs=105.2
Q ss_pred ccccccCCceEEEee----eecCchhHHHHHHHHH-------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 413 TEIAKGSNGTVVYEG----IYEGRPVAVKRLVRAL-------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 413 ~~LG~G~fG~V~~~~----~~~g~~VAVK~i~~~~-------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
+.||+|+||.||.+. ..+++.||+|.+.+.. .....+|+..|. .++||||+++++++..++..|+|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~-~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILE-AVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHH-hCCCCchhceeeEEecCCeEEEEEe
Confidence 579999999988742 3468899999765421 223457886554 4599999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+. |+|.+++.. .+.+.+..+..++.|+ |+|||+++|+||||| |++.+|.+++..+++++
T Consensus 81 ~~~~~~L~~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 148 (323)
T cd05584 81 YLSGGELFMHLER------EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCK 148 (323)
T ss_pred CCCCchHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCe
Confidence 998 599999977 4567888888888888 899999999999999 88999998888887765
No 102
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.58 E-value=5.9e-16 Score=160.51 Aligned_cols=127 Identities=25% Similarity=0.216 Sum_probs=104.1
Q ss_pred ccccCCceEEE-eeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcC--CCCCeeEEeeeccCcceEEEEecccc-
Q 042769 415 IAKGSNGTVVY-EGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASD--QHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 415 LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l--~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
||+|+||+||+ .+..+++.||||++.+.. ......|...+.... +||||+++++++......|+|||||.
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999888 466789999999775431 112334554454444 79999999999999999999999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.+++.. ...+++..++.++.|+ |+|||+++|+||||| |++.+|..++.++.+.+
T Consensus 81 g~L~~~l~~------~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~ 144 (330)
T cd05586 81 GELFWHLQK------EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSK 144 (330)
T ss_pred ChHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCc
Confidence 599999876 4568999999999999 889999999999999 88999988887777654
No 103
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.58 E-value=8.5e-16 Score=166.40 Aligned_cols=138 Identities=17% Similarity=0.129 Sum_probs=107.1
Q ss_pred eeeeeecccccccCCceEEEe-eeecCchhHHHHHHHHHhhhhHHHHHHHHhcCCCCCeeEEeeeccC--------cceE
Q 042769 406 GKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNIVRWYGVEND--------KDFV 476 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~--------~~~~ 476 (549)
.+.|.+.+.||+|+||.||++ ...+++.||||++... .....+|+..|.. ++|||||++++++.. ..++
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~-~~~~~~Ei~il~~-l~h~niv~l~~~~~~~~~~~~~~~~~l 142 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-PQYKNRELLIMKN-LNHINIIFLKDYYYTECFKKNEKNIFL 142 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC-cchHHHHHHHHHh-cCCCCCcceeeeEeecccccCCCceEE
Confidence 345999999999999998884 5678899999977543 2234578866554 599999999887643 2357
Q ss_pred EEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCC-CCchhhhhhhh
Q 042769 477 YLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADG-HPSPLLLSLMR 547 (549)
Q Consensus 477 yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G-~p~~~l~~Lmr 547 (549)
++|||||+++|.+++.... .....+++..++.++.|+ |+|||+++|+||||| |++.++ .+++..+++++
T Consensus 143 ~lvmE~~~~~l~~~~~~~~--~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 143 NVVMEFIPQTVHKYMKHYA--RNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred EEEEecCCccHHHHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccch
Confidence 8999999999888876432 124568899999999998 899999999999999 777665 47777777665
No 104
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.58 E-value=9e-17 Score=170.54 Aligned_cols=132 Identities=25% Similarity=0.316 Sum_probs=111.1
Q ss_pred eeeeecccccccCCceEEE-eeeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 407 KLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
++|.-.+.||.|+||.||+ .+..+.+.||||++.-+ .-+.+++|+..|..+ +|||+|.+.|||......|||
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l-~HPntieYkgCyLre~TaWLV 104 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL-RHPNTIEYKGCYLREHTAWLV 104 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhc-cCCCcccccceeeccchHHHH
Confidence 4577789999999999999 58888999999988732 334678999776665 999999999999999999999
Q ss_pred ecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhh
Q 042769 480 LERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 480 mE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
||||-|+-.+++.-++ +++.+..+..|+.+. |.|||+.+.|||||| |+...|..++.+++
T Consensus 105 MEYClGSAsDlleVhk-----KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFG 171 (948)
T KOG0577|consen 105 MEYCLGSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFG 171 (948)
T ss_pred HHHHhccHHHHHHHHh-----ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeecccc
Confidence 9999998777776643 578889999898887 889999999999999 88888876666554
No 105
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=99.58 E-value=2.2e-15 Score=160.87 Aligned_cols=131 Identities=15% Similarity=0.264 Sum_probs=105.3
Q ss_pred CceeccCCCcccccc-ccceeeeeccccccccccceeeecCCcchhhhccc-cccccCCcchhh-----------hhhcC
Q 042769 1 VSWTFGTGTPIYSSY-QAPVQATVDQDNASELTNSFFIDCGEDWGLYAHGL-LGRMKLPQSIDD-----------YVKTA 67 (549)
Q Consensus 1 ~~W~f~tg~~i~ss~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~-----------~v~~s 67 (549)
++|++..|+.+.+.| +++ |++..+.+|..+.+|.|||+|. +|++.|.+++.. .+.++
T Consensus 46 ~~W~~~~g~g~~~~~~~~s----------Pvv~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~ 115 (394)
T PRK11138 46 TVWSTSVGDGVGDYYSRLH----------PAVAYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGG 115 (394)
T ss_pred eeeEEEcCCCCccceeeec----------cEEECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccc
Confidence 468888888764211 111 7787888888889999999999 999999998865 56678
Q ss_pred CCcccccceeecceeeEEEEEEccccceeeecCCCCCCccccchhhhcccccccccchHHHHhhccCccccccccCceEE
Q 042769 68 PHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLL 147 (549)
Q Consensus 68 P~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 147 (549)
|++. +|.||+|+.++.+||+|++||+++|++..++.. ...|... .++|
T Consensus 116 ~~v~-~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~---------------------------~ssP~v~----~~~v 163 (394)
T PRK11138 116 VTVA-GGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEA---------------------------LSRPVVS----DGLV 163 (394)
T ss_pred cEEE-CCEEEEEcCCCEEEEEECCCCCCcccccCCCce---------------------------ecCCEEE----CCEE
Confidence 9888 899999999999999999999999999886410 0112121 2799
Q ss_pred EEEcccceeecccCCCCCceeeeeee
Q 042769 148 FITRTDYTLQSFEPNSDNVSWSMTVA 173 (549)
Q Consensus 148 ~i~r~d~~l~a~d~~~g~~~Wn~~~~ 173 (549)
|++..++.|+|+|+++|+++|++...
T Consensus 164 ~v~~~~g~l~ald~~tG~~~W~~~~~ 189 (394)
T PRK11138 164 LVHTSNGMLQALNESDGAVKWTVNLD 189 (394)
T ss_pred EEECCCCEEEEEEccCCCEeeeecCC
Confidence 99999999999999999999999875
No 106
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.58 E-value=5.9e-16 Score=162.75 Aligned_cols=131 Identities=17% Similarity=0.139 Sum_probs=108.9
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHHHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccccc
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCTCS 486 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~Gs 486 (549)
.|++.+.||+|+||.||++ ...+++.||+|.... .....|+..+. .++||||+++++++......++|||++.|+
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~---~~~~~E~~~l~-~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 142 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK---GTTLIEAMLLQ-NVNHPSVIRMKDTLVSGAITCMVLPHYSSD 142 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc---cccHHHHHHHH-hCCCCCCcChhheEEeCCeeEEEEEccCCc
Confidence 3999999999999998874 556678999996442 23456885554 459999999999999999999999999999
Q ss_pred hhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 487 LDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 487 L~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|.+++... ...+++..+..++.|+ |.|||+++|+||||| |++.++...+..+++.+
T Consensus 143 l~~~l~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 205 (357)
T PHA03209 143 LYTYLTKR-----SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQ 205 (357)
T ss_pred HHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCcccc
Confidence 99998762 3568899999999998 899999999999999 88888888777666543
No 107
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.57 E-value=8.2e-16 Score=159.75 Aligned_cols=134 Identities=20% Similarity=0.261 Sum_probs=112.0
Q ss_pred eeeeecccccccCCceEEE-eeeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 407 KLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
+.|++.+.||+|+||.||+ ....++..+|+|.+... ....+.+|++.|.++ +||||+++++++...+..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEee
Confidence 3499999999999999887 46677889999977643 234577888766555 99999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccce-eEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSV-KVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~-~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||. |+|.+++.. ...+++..+..++.|+ |.|||++ +|+||||| |++.+|.+++..+.+++
T Consensus 84 ~~~~~~L~~~l~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 152 (331)
T cd06649 84 HMDGGSLDQVLKE------AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSG 152 (331)
T ss_pred cCCCCcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccc
Confidence 998 599999977 4568888999999998 8899985 69999999 88899988887777654
No 108
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.57 E-value=7.4e-16 Score=163.25 Aligned_cols=140 Identities=22% Similarity=0.188 Sum_probs=109.5
Q ss_pred eeeecccccccCCceEEEe-ee-----ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEE
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GI-----YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVY 477 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~-----~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~y 477 (549)
.|++.+.||+|+||.||.. .. .+++.||+|++... ....+.+|+..+..+.+|+|||+++++|...+..|
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~ 118 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVL 118 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeE
Confidence 3889999999999998763 22 23457999988642 23356789877766658999999999999999999
Q ss_pred EEecccc-cchhhhhhhcccC-----------------------------------------------------------
Q 042769 478 LSLERCT-CSLDDLIQTYSDS----------------------------------------------------------- 497 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~----------------------------------------------------------- 497 (549)
+|||||. |+|.++++.....
T Consensus 119 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (374)
T cd05106 119 VITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSK 198 (374)
T ss_pred EeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccccc
Confidence 9999997 6999998653210
Q ss_pred -----CcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 498 -----SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 498 -----~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
.....+++..++.++.|+ |+|||+++|+||||| |++.++.+++..+.+.+
T Consensus 199 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~ 260 (374)
T cd05106 199 DEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLAR 260 (374)
T ss_pred chhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeee
Confidence 011246777888999999 899999999999999 78888888777776654
No 109
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.57 E-value=5.3e-17 Score=160.64 Aligned_cols=132 Identities=20% Similarity=0.309 Sum_probs=115.7
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHH-HHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-c
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVR-ALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-C 485 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~-~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-G 485 (549)
|.+..+||+|+||.|+++ ++.+|+.+|+|.+.. ...+.+.+|+.+|+.+ +.|++|++||.|..+..+|||||||. |
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC-~S~yVVKYYGSYFK~sDLWIVMEYCGAG 113 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQC-KSKYVVKYYGSYFKHSDLWIVMEYCGAG 113 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHc-CCchhhhhhhhhccCCceEeehhhcCCC
Confidence 888899999999998884 889999999998874 3566788999776655 99999999999999999999999997 8
Q ss_pred chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 486 SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 486 sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+..+.++- .++.+++..+..++... |+|||..+-|||||| |++.+|+.++..++.+
T Consensus 114 SiSDI~R~-----R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVA 176 (502)
T KOG0574|consen 114 SISDIMRA-----RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVA 176 (502)
T ss_pred cHHHHHHH-----hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhcccc
Confidence 99999986 25689999999888876 899999999999999 9999999988877643
No 110
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.57 E-value=4.3e-16 Score=157.43 Aligned_cols=134 Identities=15% Similarity=0.182 Sum_probs=108.0
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
.|++.+.||+|+||.||++ ...+++.||||++... ..+...+|+..+.. ++||||+++++++...+..|+|||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRT-LKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHh-CCCccccchhhhEecCCEEEEEEe
Confidence 3889999999999998874 6667899999977643 22345678865544 599999999999999999999999
Q ss_pred ccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+.+++.+.+... ...+++..++.++.|+ |.|||+.+|+||||| |++.+|..++..+.+.+
T Consensus 81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~ 148 (287)
T cd07848 81 YVEKNMLELLEEM-----PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFAR 148 (287)
T ss_pred cCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcc
Confidence 9987555555441 3468889999999999 889999999999999 78888887776666543
No 111
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.57 E-value=9e-16 Score=153.85 Aligned_cols=131 Identities=18% Similarity=0.113 Sum_probs=105.8
Q ss_pred eeecccccccCCceEEEe-ee---ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 409 FVSNTEIAKGSNGTVVYE-GI---YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~---~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
|++.+.||+|+||.||.. .. ..+..||+|.+... ....+.+|+..+.. ++||||+++++++...+..++||
T Consensus 7 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~ 85 (266)
T cd05064 7 IKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQ-FDHSNIVRLEGVITRGNTMMIVT 85 (266)
T ss_pred eEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhc-CCCCCcCeEEEEEecCCCcEEEE
Confidence 888999999999998763 22 34678999987643 12345678866655 49999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
||++ |+|.+++... ...+++..++.++.|+ |+|||+++++||||| |++.++.+....+.+
T Consensus 86 e~~~~~~L~~~l~~~-----~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~ 153 (266)
T cd05064 86 EYMSNGALDSFLRKH-----EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRR 153 (266)
T ss_pred EeCCCCcHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcc
Confidence 9998 5999998762 2468889999999999 899999999999999 788888776665543
No 112
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.57 E-value=9e-16 Score=154.44 Aligned_cols=138 Identities=22% Similarity=0.245 Sum_probs=112.7
Q ss_pred eeeecccccccCCceEEE-eeeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 408 LFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
.|++.+.||+|+||.||+ .+..+|+.||+|++... .......|+..+.+..+||||+++++++..+...|++|||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 388889999999999888 46678999999977643 1234556776666777999999999999999999999999
Q ss_pred cccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccce-eEEEeecc----ccccCCCCchhhhhhhh
Q 042769 483 CTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSV-KVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 483 ~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~-~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
++|+|.+++..... ....+++..+..++.|+ |+|||++ +++||||| |++.++.+++..+.+.+
T Consensus 82 ~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~ 152 (283)
T cd06617 82 MDTSLDKFYKKVYD--KGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISG 152 (283)
T ss_pred hcccHHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence 99999888875321 23568999999999999 8999987 99999999 88888888777666543
No 113
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.57 E-value=1.4e-15 Score=159.35 Aligned_cols=128 Identities=20% Similarity=0.203 Sum_probs=104.0
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
|+..+.||+|+||.||+. ...+++.||||++... ....+.+|+..+.. ++|+||+++++++...+.+|+|||||
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRD-VNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHh-CCCCCcceeeeEeccCCeEEEEEecC
Confidence 788899999999998884 5667899999987532 23456788866655 49999999999999999999999999
Q ss_pred c-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 484 T-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 484 ~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
. |+|.+.. ...+..+..++.|+ |+|||+++|+||||| |++.+|..++..+++.+
T Consensus 155 ~~~~L~~~~----------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~ 216 (353)
T PLN00034 155 DGGSLEGTH----------IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSR 216 (353)
T ss_pred CCCcccccc----------cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccce
Confidence 8 4775432 24556777888888 899999999999999 88999988888777654
No 114
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.57 E-value=1e-15 Score=160.77 Aligned_cols=134 Identities=28% Similarity=0.320 Sum_probs=108.7
Q ss_pred ceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcc----
Q 042769 405 VGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKD---- 474 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~---- 474 (549)
+-+.|++.+.||+|+||.||.. +..+|+.||||++... ......+|+..+. .++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~-~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLK-CVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHH-hCCCCCEeeeeeeeccCCCccc
Confidence 3345999999999999998884 6678999999987642 2345668886554 459999999999986543
Q ss_pred --eEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 475 --FVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 475 --~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
..|+||||+.++|.+.+.. .+++..+..++.|+ |.|||+++|+||||| |++.+|.+++..+++
T Consensus 98 ~~~~~lv~e~~~~~l~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 98 FQDVYLVMELMDANLCQVIHM--------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred cceeEEEEeCCCcCHHHHHhc--------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCC
Confidence 4799999999988887743 37788888899998 899999999999999 889999888887776
Q ss_pred hh
Q 042769 546 MR 547 (549)
Q Consensus 546 mr 547 (549)
.+
T Consensus 170 a~ 171 (359)
T cd07876 170 AR 171 (359)
T ss_pred cc
Confidence 54
No 115
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.57 E-value=8.3e-16 Score=163.24 Aligned_cols=134 Identities=20% Similarity=0.288 Sum_probs=111.1
Q ss_pred cceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHHH-------hh----hhHHHHHHHHhcC--CCCCeeEEeee
Q 042769 404 NVGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-------HD----VAFKEIQNLIASD--QHPNIVRWYGV 469 (549)
Q Consensus 404 ~igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-------~~----~~~~Ei~~L~~~l--~HpNIVrl~g~ 469 (549)
.+.+ |...+.+|.|+||.|.++ ++.+..+|+||.|.++. ++ ..-.||++|..+- .|+||++++++
T Consensus 559 k~s~-yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf 637 (772)
T KOG1152|consen 559 KFSD-YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF 637 (772)
T ss_pred cccc-ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe
Confidence 4444 889999999999998885 67778899999888752 11 2336887765441 39999999999
Q ss_pred ccCcceEEEEecccc-c-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCch
Q 042769 470 ENDKDFVYLSLERCT-C-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSP 540 (549)
Q Consensus 470 ~~~~~~~yLVmE~~~-G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~ 540 (549)
|+++++.||+||--. | +|+++|.. ...++|..+..++.|+ +++||+.+||||||| .++.+|..++
T Consensus 638 FEddd~yyl~te~hg~gIDLFd~IE~------kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~kl 711 (772)
T KOG1152|consen 638 FEDDDYYYLETEVHGEGIDLFDFIEF------KPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKL 711 (772)
T ss_pred eecCCeeEEEecCCCCCcchhhhhhc------cCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEE
Confidence 999999999999874 7 99999988 5679999999999999 889999999999999 8899998776
Q ss_pred hhhh
Q 042769 541 LLLS 544 (549)
Q Consensus 541 ~l~~ 544 (549)
..++
T Consensus 712 idfg 715 (772)
T KOG1152|consen 712 IDFG 715 (772)
T ss_pred eecc
Confidence 6543
No 116
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.57 E-value=4.4e-16 Score=165.45 Aligned_cols=137 Identities=22% Similarity=0.192 Sum_probs=116.5
Q ss_pred eeeeecccccccCCceEEEeeeecCchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 407 KLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
+...+.++||+|.||.|.++....+..||||.++... ...+.+|+..|.++ +|||||+|+|+|..++.++||+||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqL-khPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRL-KHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhcc-CCCCeeEEEeeeecCCchHHHHHH
Confidence 3366788999999999988888778999999998642 34577899777666 999999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhhc
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRL 548 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd 548 (549)
|+ |+|.+|+..+- ...+......+++.|| |+||.+.++|||||- |++.+++.++..+++.|.
T Consensus 617 mEnGDLnqFl~ahe----apt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ 686 (807)
T KOG1094|consen 617 MENGDLNQFLSAHE----LPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRN 686 (807)
T ss_pred HhcCcHHHHHHhcc----CcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccc
Confidence 97 89999998843 1224455667799999 999999999999998 999999999999988773
No 117
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.56 E-value=1.3e-15 Score=155.71 Aligned_cols=139 Identities=21% Similarity=0.220 Sum_probs=108.2
Q ss_pred eeeecccccccCCceEEEeee-----------------ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEE
Q 042769 408 LFVSNTEIAKGSNGTVVYEGI-----------------YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRW 466 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~~~-----------------~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl 466 (549)
.|.+.++||+|+||.||.+.. .++..||+|.+... ....+.+|+..+.+ ++||||+++
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~ 84 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSR-LKDPNIIRL 84 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhh-cCCCCeeEE
Confidence 488889999999999887421 12346899977642 23356788866555 499999999
Q ss_pred eeeccCcceEEEEecccc-cchhhhhhhcccC-------------CcccccCchhhhHHhhhe---eecccceeEEEeec
Q 042769 467 YGVENDKDFVYLSLERCT-CSLDDLIQTYSDS-------------SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDL 529 (549)
Q Consensus 467 ~g~~~~~~~~yLVmE~~~-GsL~~~L~~~~~~-------------~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDL 529 (549)
++++...+..+++||||. |+|.+++...... .....+++..+..++.|+ |.|||+++|+||||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dl 164 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDL 164 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCc
Confidence 999999999999999997 5999998653211 111246667788899998 89999999999999
Q ss_pred c----ccccCCCCchhhhhhhh
Q 042769 530 S----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 530 K----Ll~~~G~p~~~l~~Lmr 547 (549)
| |++.+|.+++..+++.+
T Consensus 165 kp~Nill~~~~~~kl~DfG~~~ 186 (304)
T cd05096 165 ATRNCLVGENLTIKIADFGMSR 186 (304)
T ss_pred chhheEEcCCccEEECCCccce
Confidence 9 88999988888777665
No 118
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.56 E-value=2.5e-16 Score=167.58 Aligned_cols=130 Identities=24% Similarity=0.294 Sum_probs=111.6
Q ss_pred eeeecccccccCCceEEE-eeeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 408 LFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
.|....+||+|+.|.||. ....+++.||||++... ..+..+.|+..|+.. +|+|||++++.|...+.+|+|||||
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~-~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDL-HHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhc-cchHHHHHHHHhcccceeEEEEeec
Confidence 377789999999999888 46778999999988754 344677999776665 9999999999999999999999999
Q ss_pred c-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 484 T-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 484 ~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
+ |+|.+.+.. ..++|.++..+++++ |+|||.++||||||| |+..+|.-++-.++.
T Consensus 353 ~ggsLTDvVt~-------~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGF 415 (550)
T KOG0578|consen 353 EGGSLTDVVTK-------TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGF 415 (550)
T ss_pred CCCchhhhhhc-------ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeee
Confidence 8 599999876 449999999999988 899999999999999 899999876665553
No 119
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.56 E-value=1.1e-15 Score=173.79 Aligned_cols=132 Identities=27% Similarity=0.286 Sum_probs=111.1
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|.+.++||+|+||.||++ ...+++.||||++.... ...+.+|+..+ +.++||||+++++++.....+|||||
T Consensus 6 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l-~~l~hp~Iv~~~~~~~~~~~~~lVmE 84 (669)
T cd05610 6 FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDAL-ALSKSPFIVHLYYSLQSANNVYLVME 84 (669)
T ss_pred EEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHH-HhcCCCCcCeEEEEEEECCEEEEEEe
Confidence 899999999999998884 55678999999876432 23456677554 55699999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||. ++|.+++.. .+.+++..++.++.|+ |+|||.++||||||| |++.+|+.++..+.|.|
T Consensus 85 y~~g~~L~~li~~------~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 85 YLIGGDVKSLLHI------YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred CCCCCCHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 997 599999976 4568888999999999 899999999999999 88999988887777665
No 120
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.56 E-value=1.7e-15 Score=153.28 Aligned_cols=130 Identities=24% Similarity=0.155 Sum_probs=103.6
Q ss_pred ccccCCceEEE-eeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-cc
Q 042769 415 IAKGSNGTVVY-EGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-CS 486 (549)
Q Consensus 415 LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-Gs 486 (549)
||+|+||+||. ....+++.||+|.+.... .+.+..|+..+. .++||||+++.+++......|+|||||+ |+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~-~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILA-KVHSRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHH-hCCCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 79999999888 466789999999876532 123456776554 4499999999999999999999999997 59
Q ss_pred hhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 487 LDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 487 L~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|.+++.... .....+++..+..++.|+ |.|||+++|+||||| |++.+|...+..+.+.+
T Consensus 80 L~~~~~~~~--~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~ 145 (280)
T cd05608 80 LRYHIYNVD--EENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAV 145 (280)
T ss_pred HHHHHHhcc--ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccce
Confidence 988875422 123468899999999999 889999999999999 78888877766665543
No 121
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.56 E-value=1.2e-15 Score=158.93 Aligned_cols=134 Identities=21% Similarity=0.259 Sum_probs=110.7
Q ss_pred eeeeecccccccCCceEEE-eeeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 407 KLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
+.|++.+.||+|+||.||. .+..++..+|+|++... ....+.+|++.+..+ +||||++++++|...++.|+|||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-CCCcccceeEEEEECCEEEEEEe
Confidence 3489999999999999888 46667888999876532 234567898766655 99999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccce-eEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSV-KVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~-~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+. |+|.+++.. .+.+++..+..++.|+ |.|||+. +|+||||| |++.+|.+++..+.+.+
T Consensus 84 ~~~~~~L~~~l~~------~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~ 152 (333)
T cd06650 84 HMDGGSLDQVLKK------AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG 152 (333)
T ss_pred cCCCCcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcch
Confidence 997 599999977 4467888888999888 8899974 79999999 88889988777766554
No 122
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.56 E-value=2.1e-15 Score=165.06 Aligned_cols=137 Identities=18% Similarity=0.144 Sum_probs=110.0
Q ss_pred eeeecccccccCCceEEEe-eeec-CchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYE-GRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~-g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
.|.+.+.||+|+||.||.+ ...+ ++.||+|.+... ....+.+|+..|.. ++|||||++++++...+..||||||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~-l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAA-CDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHh-CCCCCEeEEEEEEEECCEEEEEEEC
Confidence 3999999999999998874 3444 678888865432 22345678866544 5999999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|. |+|.++++... .....+++..+..++.|+ |.|||+++|+||||| |++.+|.+++..+.+.+
T Consensus 147 ~~gg~L~~~l~~~~--~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~ 217 (478)
T PTZ00267 147 GSGGDLNKQIKQRL--KEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSK 217 (478)
T ss_pred CCCCCHHHHHHHHH--hccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCce
Confidence 97 69999886522 123468888999999999 889999999999999 88999988888777654
No 123
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.56 E-value=3.9e-15 Score=147.76 Aligned_cols=121 Identities=23% Similarity=0.253 Sum_probs=103.0
Q ss_pred cceeeeee-cccccccCCceEEEe-eeecCchhHHHHHHHHHhhhhHHHHHHHHhcCCCCCeeEEeeecc----CcceEE
Q 042769 404 NVGKLFVS-NTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNIVRWYGVEN----DKDFVY 477 (549)
Q Consensus 404 ~igk~y~~-~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~----~~~~~y 477 (549)
.|.+.|.+ ..+||-|-.|+|+.+ ++.+++++|+|++.. .+.+++|++.....-.|||||+++++|. ....+.
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D--s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLL 135 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD--SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLL 135 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc--CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeE
Confidence 34444777 579999999998775 788999999999974 5668888877666669999999999976 345789
Q ss_pred EEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc
Q 042769 478 LSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
+|||+|+ |.|++.|+.++ ...++|.++..++.|| +.|||+.+|.|||||
T Consensus 136 iVmE~meGGeLfsriq~~g----~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlK 188 (400)
T KOG0604|consen 136 IVMECMEGGELFSRIQDRG----DQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLK 188 (400)
T ss_pred eeeecccchHHHHHHHHcc----cccchHHHHHHHHHHHHHHHHHHHhcchhhccCC
Confidence 9999998 59999999854 5679999999999999 899999999999999
No 124
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.56 E-value=1.4e-15 Score=155.35 Aligned_cols=132 Identities=18% Similarity=0.193 Sum_probs=109.7
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
|.+.+.||+|+||.||.. ...+++.||+|.+.... .....+|+..+..+ +||||+++++++...+..|+||||+
T Consensus 8 y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~lv~e~~ 86 (301)
T cd07873 8 YIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEYL 86 (301)
T ss_pred eEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhc-CCCCcceEEEEEecCCeEEEEEecc
Confidence 899999999999998884 56678999999876431 22456788666555 9999999999999999999999999
Q ss_pred ccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 484 TCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 484 ~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
.++|.+++... ...+++..+..++.|+ |+|||+++|+||||| |++.+|..++..+++.
T Consensus 87 ~~~l~~~l~~~-----~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 151 (301)
T cd07873 87 DKDLKQYLDDC-----GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLA 151 (301)
T ss_pred ccCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcch
Confidence 99999988762 2457888899999988 889999999999999 8888888777666554
No 125
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.56 E-value=4.7e-15 Score=158.66 Aligned_cols=132 Identities=25% Similarity=0.262 Sum_probs=112.1
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHHHh------hhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRALH------DVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~~------~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
.|...+.||-|+||+|.+. ...+...+|+|.+.+... .....|-.+|... +.+.||+||..|++.+.+|+||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCceEEEE
Confidence 3888999999999999884 556788999999887521 1223444445444 8999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
||++ |++..+|.+ .+-|+|+.++.++.++ +++.|..|+|||||| |+|.+||.++-+++|-
T Consensus 709 dYIPGGDmMSLLIr------mgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLC 776 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIR------MGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 776 (1034)
T ss_pred eccCCccHHHHHHH------hccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeecccc
Confidence 9998 599999988 6789999999999988 889999999999999 9999999999988874
No 126
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=99.55 E-value=5.3e-15 Score=157.88 Aligned_cols=119 Identities=13% Similarity=0.144 Sum_probs=97.7
Q ss_pred cccccceeeecCCcchhhhccc-cccccCCcchhhhhhcCCCcccccceeecceeeEEEEEEccccceeeecCCCCCCcc
Q 042769 29 SELTNSFFIDCGEDWGLYAHGL-LGRMKLPQSIDDYVKTAPHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSST 107 (549)
Q Consensus 29 ~~~~~~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~~v~~sP~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~ 107 (549)
|++..+.+|.++.+|.|||+|+ +|++.|.+.++..+.++|++. ||.||+++.++.+||+|++||+++|++........
T Consensus 116 ~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v~-~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~ 194 (394)
T PRK11138 116 VTVAGGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVVS-DGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLT 194 (394)
T ss_pred cEEECCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEEE-CCEEEEECCCCEEEEEEccCCCEeeeecCCCCccc
Confidence 6677778888989999999999 999999999999899999999 99999999999999999999999999987531000
Q ss_pred ccchhhhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCceeeeeeeh
Q 042769 108 LQNEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVSWSMTVAE 174 (549)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~Wn~~~~~ 174 (549)
+. +...|... .+.||++..++.|+|+|+++|+++|.+.++.
T Consensus 195 ~~----------------------~~~sP~v~----~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~ 235 (394)
T PRK11138 195 LR----------------------GESAPATA----FGGAIVGGDNGRVSAVLMEQGQLIWQQRISQ 235 (394)
T ss_pred cc----------------------CCCCCEEE----CCEEEEEcCCCEEEEEEccCChhhheecccc
Confidence 00 00122221 2689999999999999999999999987643
No 127
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.55 E-value=1.3e-15 Score=154.30 Aligned_cols=136 Identities=24% Similarity=0.303 Sum_probs=106.4
Q ss_pred eeeecccccccCCceEEEe-ee-ecCchhHHHHHHHHH-----hhhhHHHHHHHHh--cCCCCCeeEEeeecc-----Cc
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GI-YEGRPVAVKRLVRAL-----HDVAFKEIQNLIA--SDQHPNIVRWYGVEN-----DK 473 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~-~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~--~l~HpNIVrl~g~~~-----~~ 473 (549)
.|++.+.||+|+||.||++ +. .+++.||+|++.... .....+|+..+.. .++||||+++++++. ..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 4888899999999998884 33 346889999776421 1234566655433 347999999999875 34
Q ss_pred ceEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 474 DFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 474 ~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
..++++|||+.++|.+++.... ...+++..+..++.|+ |.|||+++|+||||| |++.+|.+++..+++.
T Consensus 82 ~~~~lv~e~~~~~l~~~~~~~~----~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T cd07862 82 TKLTLVFEHVDQDLTTYLDKVP----EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 157 (290)
T ss_pred CcEEEEEccCCCCHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccce
Confidence 5689999999999999987632 3458889999999999 899999999999999 8889998888777665
Q ss_pred h
Q 042769 547 R 547 (549)
Q Consensus 547 r 547 (549)
+
T Consensus 158 ~ 158 (290)
T cd07862 158 R 158 (290)
T ss_pred E
Confidence 4
No 128
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.55 E-value=1.9e-15 Score=150.25 Aligned_cols=133 Identities=20% Similarity=0.233 Sum_probs=108.0
Q ss_pred eeecccccccCCceEEEeeeecCchhHHHHHHHH--HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-c
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRA--LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-C 485 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-G 485 (549)
|++.+.||+|+||.||......+..+|+|.+... ....+.+|+..+.. ++||||+++++++...+..+++|||++ |
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~iv~e~~~~~ 84 (256)
T cd05114 6 LTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMK-LSHPKLVQLYGVCTQQKPLYIVTEFMENG 84 (256)
T ss_pred cEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHH-CCCCCceeEEEEEccCCCEEEEEEcCCCC
Confidence 7788899999999988765555678999977643 23356778866655 499999999999999999999999997 6
Q ss_pred chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 486 SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 486 sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+|.++++.. ...+++..+..++.|+ |.|||+++++||||| +++.++.+++..+++.+
T Consensus 85 ~L~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~ 148 (256)
T cd05114 85 CLLNYLRQR-----QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTR 148 (256)
T ss_pred cHHHHHHhC-----ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCcc
Confidence 999998752 2357888889999888 899999999999999 78888877776666544
No 129
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.55 E-value=5.8e-15 Score=156.33 Aligned_cols=133 Identities=14% Similarity=0.207 Sum_probs=108.2
Q ss_pred CceeccCCCccccccccceeeeeccccccccccceeeecCCcchhhhccc-cccccCCcchhhhhhcCCCcccccceeec
Q 042769 1 VSWTFGTGTPIYSSYQAPVQATVDQDNASELTNSFFIDCGEDWGLYAHGL-LGRMKLPQSIDDYVKTAPHITEEGAVTLG 79 (549)
Q Consensus 1 ~~W~f~tg~~i~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~~v~~sP~~~~dg~v~~G 79 (549)
++|+++.|+.+..++-. ..|.+..+.+|.++.||.||++|+ +|+..|.++++..+.++|++. ++.||+|
T Consensus 42 ~~W~~~~~~~~~~~~~~---------~~p~v~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v~-~~~v~v~ 111 (377)
T TIGR03300 42 QVWSASVGDGVGHYYLR---------LQPAVAGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGAD-GGLVFVG 111 (377)
T ss_pred eeeEEEcCCCcCccccc---------cceEEECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEEc-CCEEEEE
Confidence 47999999887411000 017777888899999999999998 999999999999999999998 9999999
Q ss_pred ceeeEEEEEEccccceeeecCCCCCCccccchhhhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeecc
Q 042769 80 SKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSF 159 (549)
Q Consensus 80 sk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~ 159 (549)
+.++.+|++|++||+++|++..++.. .+++.+ ..+.||++..|+.|||+
T Consensus 112 ~~~g~l~ald~~tG~~~W~~~~~~~~----------------------------~~~p~v---~~~~v~v~~~~g~l~a~ 160 (377)
T TIGR03300 112 TEKGEVIALDAEDGKELWRAKLSSEV----------------------------LSPPLV---ANGLVVVRTNDGRLTAL 160 (377)
T ss_pred cCCCEEEEEECCCCcEeeeeccCcee----------------------------ecCCEE---ECCEEEEECCCCeEEEE
Confidence 99999999999999999998876410 011111 12689999999999999
Q ss_pred cCCCCCceeeeeeeh
Q 042769 160 EPNSDNVSWSMTVAE 174 (549)
Q Consensus 160 d~~~g~~~Wn~~~~~ 174 (549)
|+++|+++|++....
T Consensus 161 d~~tG~~~W~~~~~~ 175 (377)
T TIGR03300 161 DAATGERLWTYSRVT 175 (377)
T ss_pred EcCCCceeeEEccCC
Confidence 999999999987653
No 130
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.55 E-value=2.4e-15 Score=163.62 Aligned_cols=133 Identities=18% Similarity=0.108 Sum_probs=111.2
Q ss_pred eeeeeecccccccCCceEEEe-eeecCchhHHHHHHHHHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc
Q 042769 406 GKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT 484 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~ 484 (549)
+..|.+.+.||+|+||.||.+ ...+++.||||... .....+|++.|.. ++|+|||++++++...+..+++||++.
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~---~~~~~~E~~iL~~-L~HpnIv~l~~~~~~~~~~~lv~e~~~ 243 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW---YASSVHEARLLRR-LSHPAVLALLDVRVVGGLTCLVLPKYR 243 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc---ccCHHHHHHHHHH-CCCCCCCcEEEEEEECCEEEEEEEccC
Confidence 445999999999999998884 56678999999643 2345688866555 599999999999999999999999999
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
++|.+++... ...+++..++.++.|+ |.|||+++|+||||| |++.++..++..+.+.+
T Consensus 244 ~~L~~~l~~~-----~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~ 308 (461)
T PHA03211 244 SDLYTYLGAR-----LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAAC 308 (461)
T ss_pred CCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCce
Confidence 9999998762 2468999999999999 899999999999999 88888888877777654
No 131
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.55 E-value=1.7e-15 Score=153.02 Aligned_cols=135 Identities=24% Similarity=0.243 Sum_probs=107.1
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHh--cCCCCCeeEEeeeccC-----cce
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIA--SDQHPNIVRWYGVEND-----KDF 475 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~--~l~HpNIVrl~g~~~~-----~~~ 475 (549)
|++.+.||+|+||.||++ ...+++.||+|.+.... .....+|+..+.. .++||||+++++++.. ...
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 788899999999998884 66789999999876431 1234466655433 2479999999998764 345
Q ss_pred EEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 476 VYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 476 ~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
.+++|||+.++|.+++.... ...+++..++.++.|+ |.|||+++|+||||| |++.+|..++..+++++
T Consensus 82 ~~lv~e~~~~~l~~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 82 VTLVFEHVDQDLRTYLDKVP----PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred EEEEEcccccCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccc
Confidence 89999999999999987632 3458899999999999 889999999999999 88889888777766553
No 132
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.54 E-value=3.2e-15 Score=166.25 Aligned_cols=130 Identities=25% Similarity=0.293 Sum_probs=105.3
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeee-ccC------cceEE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGV-END------KDFVY 477 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~-~~~------~~~~y 477 (549)
.++.+.|.+|+|+.||.+ ....|..||+|++-.. ......+||..|..+.+|+|||.+++. ... .-+++
T Consensus 39 v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evl 118 (738)
T KOG1989|consen 39 VTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVL 118 (738)
T ss_pred EEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEE
Confidence 667789999999999995 4444599999988743 344677999888888789999999993 221 23689
Q ss_pred EEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eeccccee--EEEeecc----ccccCCCCchhh
Q 042769 478 LSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVK--VIIRDLS----LWKADGHPSPLL 542 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~--IIHRDLK----Ll~~~G~p~~~l 542 (549)
|.||||. |.|.++|..+. ...|++.++++|+.++ +.+||.+. ||||||| |+..+|+-++-+
T Consensus 119 lLmEyC~gg~Lvd~mn~Rl----q~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCD 189 (738)
T KOG1989|consen 119 LLMEYCKGGSLVDFMNTRL----QTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCD 189 (738)
T ss_pred eehhhccCCcHHHHHHHHH----hccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCc
Confidence 9999998 69999998743 4569999999999999 89999876 9999999 888888654433
No 133
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.54 E-value=2.3e-15 Score=152.51 Aligned_cols=132 Identities=20% Similarity=0.198 Sum_probs=109.6
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
|++.+.||+|+||.||.. ...+++.||+|.+.... .....+|+..+..+ +||||+++++++...+..|+||||+
T Consensus 7 y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (291)
T cd07844 7 YKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDL-KHANIVTLHDIIHTKKTLTLVFEYL 85 (291)
T ss_pred eeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhC-CCcceeeEEEEEecCCeEEEEEecC
Confidence 899999999999998874 55678999999876432 12355788666555 9999999999999999999999999
Q ss_pred ccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 484 TCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 484 ~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
.++|.+++... ...+++..++.++.|+ |.|||+++|+||||| |++.+|.++...+.+.
T Consensus 86 ~~~L~~~~~~~-----~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 150 (291)
T cd07844 86 DTDLKQYMDDC-----GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLA 150 (291)
T ss_pred CCCHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccc
Confidence 99999988762 2367888999999998 889999999999999 8888888777766654
No 134
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.54 E-value=2.7e-15 Score=154.02 Aligned_cols=131 Identities=21% Similarity=0.258 Sum_probs=109.6
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
|++.+.||+|+||.||+ ....++..+|+|.+... ....+.+|++.+.++ +||||+++++++..++..|++|||+
T Consensus 3 ~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 3 FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred ceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCEEEEEeecc
Confidence 88899999999999887 46667888998876532 234567888776665 9999999999999999999999999
Q ss_pred c-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccc-eeEEEeecc----ccccCCCCchhhhhhh
Q 042769 484 T-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDS-VKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 484 ~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~-~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+ ++|.++++. ...+++..+..++.|+ |.|||+ .+++||||| |++.+|.++...+++.
T Consensus 82 ~~~~L~~~l~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (308)
T cd06615 82 DGGSLDQVLKK------AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 147 (308)
T ss_pred CCCcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCc
Confidence 8 599999987 4568889999999999 899997 689999999 7888888777666544
No 135
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.54 E-value=3.3e-15 Score=151.59 Aligned_cols=133 Identities=26% Similarity=0.203 Sum_probs=108.0
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|+..+.||+|+||+||+ ....+++.+|+|.+.... .....+|+..+.. ++|+||+++++++..++..+++||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~-l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEK-VNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHH-cCCcCceeEEEEEecCCEEEEEEE
Confidence 66778999999999887 466779999999775431 2235678866655 499999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|+. |+|.+++.... ...+++..+..++.|+ |.|||+++|+||||| |++.++......+.++
T Consensus 81 ~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~ 149 (285)
T cd05632 81 IMNGGDLKFHIYNMG----NPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred eccCccHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcc
Confidence 998 59988886522 3468999999999999 889999999999999 7788887776666654
No 136
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.54 E-value=3.3e-15 Score=151.72 Aligned_cols=134 Identities=25% Similarity=0.201 Sum_probs=108.5
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|+..+.||+|+||.||+ ....+++.||||.+.... .....+|+..+. .++|+||+++++.+...+..|++||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~-~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILE-KVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHH-hCCCCCeeeeeEEEecCCEEEEEEE
Confidence 67778999999999988 466789999999775431 223557886554 4599999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|++ |+|.+++.... ...+++..+..++.|+ |.|||+++|+||||| |++.+|......+.+++
T Consensus 81 ~~~g~~L~~~l~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~ 150 (285)
T cd05630 81 LMNGGDLKFHIYHMG----EAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAV 150 (285)
T ss_pred ecCCCcHHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeecccee
Confidence 997 59999886522 3458888999999998 889999999999999 78888887777666554
No 137
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.54 E-value=1.2e-15 Score=163.23 Aligned_cols=129 Identities=23% Similarity=0.252 Sum_probs=107.6
Q ss_pred eeecccccccCCceEEEeeeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
..+...||+|+||+|| ++.+.| .||||.++.. ..+.+..|+..+.+. +|.||+-++|+|..... .||.-+|
T Consensus 394 v~l~~rIGsGsFGtV~-Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkT-RH~NIlLFMG~~~~p~~-AIiTqwC 469 (678)
T KOG0193|consen 394 VLLGERIGSGSFGTVY-RGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKT-RHENILLFMGACMNPPL-AIITQWC 469 (678)
T ss_pred hhccceecccccccee-eccccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhc-chhhheeeehhhcCCce-eeeehhc
Confidence 5667899999999955 455665 6899988743 455678899777766 99999999999998887 8999999
Q ss_pred cc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 484 TC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 484 ~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+| +|+.+|+.. ...|.....+.|+.|+ +.|||.++||||||| ++++++..++-+++|+
T Consensus 470 eGsSLY~hlHv~-----etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 470 EGSSLYTHLHVQ-----ETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred cCchhhhhccch-----hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccce
Confidence 98 999999872 3568888889999999 899999999999999 7888888877777764
No 138
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.53 E-value=3.8e-15 Score=150.53 Aligned_cols=127 Identities=21% Similarity=0.211 Sum_probs=101.7
Q ss_pred ccccCCceEEE-eeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-cc
Q 042769 415 IAKGSNGTVVY-EGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-CS 486 (549)
Q Consensus 415 LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-Gs 486 (549)
||+|+||.||+ ....+|+.||+|++.... ......|++.+..+ +||||+++++++....+.|+||||+. |+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 79999999988 466779999999775431 22344677666555 99999999999999999999999997 59
Q ss_pred hhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 487 LDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 487 L~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|.+++.... ...+++..+..++.|+ |+|||+++|+||||| |++.++.+....+.+.
T Consensus 80 L~~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~ 142 (277)
T cd05607 80 LKYHIYNVG----ERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLA 142 (277)
T ss_pred HHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceee
Confidence 988886522 3357788888888888 899999999999999 8888888777766554
No 139
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.53 E-value=2.8e-15 Score=152.16 Aligned_cols=133 Identities=25% Similarity=0.273 Sum_probs=110.8
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
.|++.+.||+|+||.||.. ...+++.||+|.+... ......+|++.+.++ +||||+++++++...+..|++|
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCeEEEEE
Confidence 3888999999999998874 5567899999976542 233466788666555 8999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||++ ++|.+++.. ...+++..+..++.|+ |.|||+++++||||+ |++.+|.+++..+.+++
T Consensus 81 e~~~~~~L~~~~~~------~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~ 149 (290)
T cd05580 81 EYVPGGELFSHLRK------SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAK 149 (290)
T ss_pred ecCCCCCHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCcc
Confidence 9996 699999987 4568899999999988 889999999999999 88899988777666554
No 140
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.53 E-value=1.3e-15 Score=158.68 Aligned_cols=135 Identities=21% Similarity=0.291 Sum_probs=109.7
Q ss_pred ceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc-----
Q 042769 405 VGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDK----- 473 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~----- 473 (549)
+.+.|++.+.||+|+||.||.+ +..+++.||||++... ......+|+..+..+ +||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHM-KHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhc-CCCchhhhhhhhcccccccc
Confidence 3455999999999999998884 5678899999987642 223456788666555 999999999987543
Q ss_pred -ceEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 474 -DFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 474 -~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
...|++||++.++|.+++.. ..+++..+..++.|+ |+|||+++|+||||| |++.+|.+++..+.+
T Consensus 92 ~~~~~~~~~~~~~~l~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 92 FNEVYLVTNLMGADLNNIVKC-------QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred cCcEEEEeecCCCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCcc
Confidence 35799999998899888754 458999999999999 889999999999999 889999888877776
Q ss_pred hh
Q 042769 546 MR 547 (549)
Q Consensus 546 mr 547 (549)
.+
T Consensus 165 ~~ 166 (343)
T cd07878 165 AR 166 (343)
T ss_pred ce
Confidence 54
No 141
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.53 E-value=3.5e-15 Score=159.70 Aligned_cols=140 Identities=21% Similarity=0.168 Sum_probs=107.3
Q ss_pred eeeecccccccCCceEEEee-e-----ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEE
Q 042769 408 LFVSNTEIAKGSNGTVVYEG-I-----YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVY 477 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~~-~-----~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~y 477 (549)
.|++.++||+|+||.||.+. . ..+..||||++... ..+.+.+|+..|..+..|||||+++++|.....+|
T Consensus 38 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~ 117 (400)
T cd05105 38 GLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIY 117 (400)
T ss_pred ceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceE
Confidence 48888999999999987642 1 12346999988642 23456789977766645999999999999999999
Q ss_pred EEecccc-cchhhhhhhcccC-----------------------------------------------------------
Q 042769 478 LSLERCT-CSLDDLIQTYSDS----------------------------------------------------------- 497 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~----------------------------------------------------------- 497 (549)
||||||+ |+|.++|......
T Consensus 118 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
T cd05105 118 IITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEA 197 (400)
T ss_pred EEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhh
Confidence 9999997 6999998763210
Q ss_pred -------------------------------CcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCc
Q 042769 498 -------------------------------SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPS 539 (549)
Q Consensus 498 -------------------------------~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~ 539 (549)
.....+++..+..++.|+ |.|||+++|+||||| |++.++..+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~k 277 (400)
T cd05105 198 SKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVK 277 (400)
T ss_pred hhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEE
Confidence 001246677778888888 899999999999999 788887776
Q ss_pred hhhhhhhh
Q 042769 540 PLLLSLMR 547 (549)
Q Consensus 540 ~~l~~Lmr 547 (549)
...+.+.+
T Consensus 278 L~DfGla~ 285 (400)
T cd05105 278 ICDFGLAR 285 (400)
T ss_pred EEeCCcce
Confidence 66665544
No 142
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.53 E-value=3.5e-15 Score=154.54 Aligned_cols=126 Identities=20% Similarity=0.091 Sum_probs=100.8
Q ss_pred eccccccc--CCceEEE-eeeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 411 SNTEIAKG--SNGTVVY-EGIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 411 ~~~~LG~G--~fG~V~~-~~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
+.++||+| +|++||+ ....+|+.||+|++.... .....+|+.. ++.++||||+++++++..++..|+||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~-l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHV-SKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHH-HHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 45789999 6777777 467789999999887532 2244567754 4555999999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPL 541 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~ 541 (549)
|+ |+|.+++..+. ...+++..++.++.|+ |+|||+++|+||||| |++.+|.....
T Consensus 81 ~~~~~l~~~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~ 143 (327)
T cd08227 81 MAYGSAKDLICTHF----MDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS 143 (327)
T ss_pred cCCCcHHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEc
Confidence 98 69999987632 2458888999999998 899999999999999 77777765443
No 143
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.53 E-value=2.2e-15 Score=157.78 Aligned_cols=134 Identities=27% Similarity=0.328 Sum_probs=108.1
Q ss_pred ceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc-----
Q 042769 405 VGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDK----- 473 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~----- 473 (549)
+.+.|++.+.||+|+||.||.+ +..+++.||||++... ......+|+..+ +.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM-KCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHH-HHhCCCchhceeeeeeccccccc
Confidence 3345999999999999998874 5677899999987642 233566788555 445999999999987643
Q ss_pred -ceEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 474 -DFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 474 -~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
...|++||||+++|.+++.. .+++..+..++.|+ |.|||+++|+||||| |++.+|.+++..+++
T Consensus 94 ~~~~~lv~e~~~~~l~~~~~~--------~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 94 FQDVYLVMELMDANLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred cceeEEEhhhhcccHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcc
Confidence 35799999999988887754 37778888899998 889999999999999 889999888887777
Q ss_pred hh
Q 042769 546 MR 547 (549)
Q Consensus 546 mr 547 (549)
.+
T Consensus 166 ~~ 167 (355)
T cd07874 166 AR 167 (355)
T ss_pred cc
Confidence 65
No 144
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.53 E-value=3.8e-15 Score=150.08 Aligned_cols=134 Identities=24% Similarity=0.276 Sum_probs=109.7
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|++.+.||+|+||.||.. ...+++.||+|.+.... .....+|+..+..+ +||||+++++++..+...|+||||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKEL-QHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhc-CCCCEeeeEEEEeeCCeEEEEEec
Confidence 778899999999998874 55678999999876431 23456788665554 899999999999999999999999
Q ss_pred cccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 483 CTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 483 ~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+.++|.+++.... ....+++..++.++.|+ |+|||+++++||||| |++.+|...+..+.+.
T Consensus 81 ~~~~l~~~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 148 (285)
T cd07861 81 LSMDLKKYLDSLP---KGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLA 148 (285)
T ss_pred CCCCHHHHHhcCC---CCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccce
Confidence 9999998887532 13568899999999999 899999999999999 7888888777666543
No 145
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.53 E-value=1.3e-15 Score=158.80 Aligned_cols=130 Identities=23% Similarity=0.193 Sum_probs=108.9
Q ss_pred eeecccccccCCceEEEeeeecCchhHHHHHHHHHhhhhHHHHHH--HHhcCCCCCeeEEeeeccCcc----eEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQN--LIASDQHPNIVRWYGVENDKD----FVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~~~~~~~Ei~~--L~~~l~HpNIVrl~g~~~~~~----~~yLVmE~ 482 (549)
.++.++||+|.||. |+++..+++.||||++.....+.+..|-.+ +. .++|+||+++++...... ..+||+||
T Consensus 212 l~l~eli~~Grfg~-V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp-~m~h~nIl~Fi~~ekr~t~~~~eywLVt~f 289 (534)
T KOG3653|consen 212 LQLLELIGRGRFGC-VWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLP-GMKHENILQFIGAEKRGTADRMEYWLVTEF 289 (534)
T ss_pred hhhHHHhhcCccce-eehhhccCceeEEEecCHHHHHHHHhHHHHHhcc-CccchhHHHhhchhccCCccccceeEEeee
Confidence 56678999999997 566778889999999998877777766543 33 559999999999987655 79999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccc---------eeEEEeecc----ccccCCCCchhhhhh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDS---------VKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~---------~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
.+ |+|.+||.. ..+++....+++..+ |+|||+ ..|+||||| |+++|+..-+.+++|
T Consensus 290 h~kGsL~dyL~~-------ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 290 HPKGSLCDYLKA-------NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred ccCCcHHHHHHh-------ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 96 999999987 458888888888877 999993 369999999 999999999988888
Q ss_pred hh
Q 042769 546 MR 547 (549)
Q Consensus 546 mr 547 (549)
++
T Consensus 363 Al 364 (534)
T KOG3653|consen 363 AL 364 (534)
T ss_pred eE
Confidence 64
No 146
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.53 E-value=4.4e-16 Score=152.57 Aligned_cols=130 Identities=20% Similarity=0.251 Sum_probs=112.3
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH-----------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFV 476 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~ 476 (549)
|.-.+.||.|..+.|..+ .+.+|..+|+|+|... ..+...+|+.+|.+...||+|+.+.++|+.+.++
T Consensus 19 y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~ 98 (411)
T KOG0599|consen 19 YEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFV 98 (411)
T ss_pred cChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchh
Confidence 666789999999977664 7788999999977632 2334568898999999999999999999999999
Q ss_pred EEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhh
Q 042769 477 YLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 477 yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
++|+|+|+ |.|+++|.. .-.+++..++++|+|+ ++|||.++||||||| |+|.|-+.++.+++
T Consensus 99 FlVFdl~prGELFDyLts------~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 99 FLVFDLMPRGELFDYLTS------KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred hhhhhhcccchHHHHhhh------heeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccc
Confidence 99999997 899999987 6679999999999999 889999999999999 88888877766654
No 147
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.53 E-value=4.3e-15 Score=148.09 Aligned_cols=133 Identities=23% Similarity=0.263 Sum_probs=107.4
Q ss_pred eeecccccccCCceEEEeeeecCchhHHHHHHHHH--hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-c
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL--HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-C 485 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~--~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-G 485 (549)
|.+.+.||+|+||.||......+..+|+|.+.... .+.+.+|+..+.. ++||||+++++++......|++|||+. |
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd05113 6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMK-LSHEKLVQLYGVCTKQRPIYIVTEYMSNG 84 (256)
T ss_pred eEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhc-CCCCCeeeEEEEEccCCCcEEEEEcCCCC
Confidence 88889999999999877544445569999776432 3356788866655 499999999999999999999999997 5
Q ss_pred chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 486 SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 486 sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+|.+++... ...+++..++.++.|+ |+|||+++++||||| |++.++.+++..+.+.+
T Consensus 85 ~l~~~i~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~ 148 (256)
T cd05113 85 CLLNYLREH-----GKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSR 148 (256)
T ss_pred cHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccce
Confidence 999998762 2358888999999999 889999999999999 78888877776665543
No 148
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.52 E-value=6.7e-15 Score=155.95 Aligned_cols=120 Identities=23% Similarity=0.268 Sum_probs=99.6
Q ss_pred cccccccCCceEEEeeeecCchhHHHHHHHHHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-cchhhh
Q 042769 412 NTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-CSLDDL 490 (549)
Q Consensus 412 ~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-GsL~~~ 490 (549)
.+-||.|+-|. |+.++..++.||||+++.- -..+|..|+++ +|||||.+.|+|.....+|||||||. |-|...
T Consensus 129 LeWlGSGaQGA-VF~Grl~netVAVKKV~el----kETdIKHLRkL-kH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~V 202 (904)
T KOG4721|consen 129 LEWLGSGAQGA-VFLGRLHNETVAVKKVREL----KETDIKHLRKL-KHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEV 202 (904)
T ss_pred hhhhccCcccc-eeeeeccCceehhHHHhhh----hhhhHHHHHhc-cCcceeeEeeeecCCceeEEeeeccccccHHHH
Confidence 35799999997 5568888999999988742 23466666555 99999999999999999999999997 899999
Q ss_pred hhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhh
Q 042769 491 IQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLL 543 (549)
Q Consensus 491 L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~ 543 (549)
|+. ...++......+..+| +.|||.++||||||| |+.-+.-.++.++
T Consensus 203 Lka------~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDF 256 (904)
T KOG4721|consen 203 LKA------GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDF 256 (904)
T ss_pred Hhc------cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccc
Confidence 988 5678888888888888 999999999999999 6665555555444
No 149
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.52 E-value=5e-15 Score=146.64 Aligned_cols=128 Identities=24% Similarity=0.260 Sum_probs=103.9
Q ss_pred ccccccCCceEEEe-eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-cc
Q 042769 413 TEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-CS 486 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-Gs 486 (549)
+.||+|+||.||.. ...+++.+|+|.+... ....+.+|+..+.. ++||||+++++++......|+||||+. ++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQ-YSHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHh-CCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 47999999998884 5668899999976532 23457788866554 599999999999999999999999997 59
Q ss_pred hhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 487 LDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 487 L~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|.+++... ...+++..++.++.|+ |.|||+++++||||| |++.+|.++...+.+.
T Consensus 80 L~~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 141 (252)
T cd05084 80 FLTFLRTE-----GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMS 141 (252)
T ss_pred HHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccC
Confidence 99998751 2357888889999998 889999999999999 7888887776666543
No 150
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.52 E-value=3.8e-15 Score=156.56 Aligned_cols=121 Identities=20% Similarity=0.220 Sum_probs=104.5
Q ss_pred ceeeeee--cccccccCCceEEE-eeeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceE
Q 042769 405 VGKLFVS--NTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFV 476 (549)
Q Consensus 405 igk~y~~--~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~ 476 (549)
+...|++ .++||.|.||+||- .++.+|+.||||+|.+. ...+.+.|+.+|..+ .||.||.+...|+..+.+
T Consensus 560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l-~HPGiV~le~M~ET~erv 638 (888)
T KOG4236|consen 560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNL-HHPGIVNLECMFETPERV 638 (888)
T ss_pred HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhc-CCCCeeEEEEeecCCceE
Confidence 3344665 68999999998776 68899999999988864 345678899777666 999999999999999999
Q ss_pred EEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc
Q 042769 477 YLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 477 yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
++|||-+.|++.+.|-. ++.+++++.....++.|| |.|||.++|+|+|||
T Consensus 639 FVVMEKl~GDMLEMILS----sEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLK 691 (888)
T KOG4236|consen 639 FVVMEKLHGDMLEMILS----SEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLK 691 (888)
T ss_pred EEEehhhcchHHHHHHH----hhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCC
Confidence 99999999998887765 467899999999999999 889999999999999
No 151
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.52 E-value=1.5e-14 Score=150.20 Aligned_cols=136 Identities=26% Similarity=0.207 Sum_probs=117.4
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|..-++||+|+||.|+-+ ...+|+.+|+|++.+.. ...++.|-++|.. .+.+.||.|-..|++.+.+++||.
T Consensus 187 F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~k-V~s~FiVslaYAfeTkd~LClVLt 265 (591)
T KOG0986|consen 187 FRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEK-VSSPFIVSLAYAFETKDALCLVLT 265 (591)
T ss_pred eeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHH-hccCcEEEEeeeecCCCceEEEEE
Confidence 788899999999998874 67899999999887653 2245667655544 488999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhhcC
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRLV 549 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd~ 549 (549)
.|+ |||.-+|..+. ...+++..++.++.+| |++||+.+||.|||| |+|..||..+.+|+|+-||
T Consensus 266 lMNGGDLkfHiyn~g----~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei 337 (591)
T KOG0986|consen 266 LMNGGDLKFHIYNHG----NPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEI 337 (591)
T ss_pred eecCCceeEEeeccC----CCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEec
Confidence 998 59988887744 4579999999999999 999999999999999 9999999999999998765
No 152
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.52 E-value=5.3e-15 Score=169.21 Aligned_cols=140 Identities=24% Similarity=0.185 Sum_probs=114.9
Q ss_pred eeecccccccCCceEEEeee--ecC----chhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEE
Q 042769 409 FVSNTEIAKGSNGTVVYEGI--YEG----RPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYL 478 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~--~~g----~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yL 478 (549)
-++.+.||+|+||.||..-. ..| ..||||.+.+. ....+.+|. .+++.++|||||+++|+|.+....+|
T Consensus 694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea-~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEA-LLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHH-HHHhcCCCcceeeEEEeecCCCCcEE
Confidence 56678999999999877322 122 34899988753 344677888 45566699999999999999999999
Q ss_pred Eecccc-cchhhhhhhcccCC-cccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhhcC
Q 042769 479 SLERCT-CSLDDLIQTYSDSS-CNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRLV 549 (549)
Q Consensus 479 VmE~~~-GsL~~~L~~~~~~~-~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd~ 549 (549)
++|||. |||..||++.+... ....++..+.+.++.|| +.||+++++|||||- |++.....++.+++|+|||
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDi 852 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDI 852 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhh
Confidence 999997 69999999854332 13458888899999999 999999999999998 9999999999999999996
No 153
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.52 E-value=2.2e-15 Score=157.36 Aligned_cols=140 Identities=22% Similarity=0.245 Sum_probs=108.0
Q ss_pred eeeecccccccCCceEEEee------eecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc-ceE
Q 042769 408 LFVSNTEIAKGSNGTVVYEG------IYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDK-DFV 476 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~~------~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~-~~~ 476 (549)
+|++.+.||+|+||.||++. ..+++.||||++... ....+.+|+..+.++.+||||+++++++... ..+
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 87 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCce
Confidence 48899999999999988742 345789999988642 2335678998887776899999999987654 468
Q ss_pred EEEecccc-cchhhhhhhcccCC---------------------------------------------------------
Q 042769 477 YLSLERCT-CSLDDLIQTYSDSS--------------------------------------------------------- 498 (549)
Q Consensus 477 yLVmE~~~-GsL~~~L~~~~~~~--------------------------------------------------------- 498 (549)
+++||||. |+|.++++......
T Consensus 88 ~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (343)
T cd05103 88 MVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAE 167 (343)
T ss_pred EEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhh
Confidence 99999997 69999987532100
Q ss_pred ----cccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 499 ----CNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 499 ----~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
....++...+..++.|+ |+|||+++|+||||| |++.++.+++..+.+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~ 227 (343)
T cd05103 168 QEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLAR 227 (343)
T ss_pred hhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEeccccc
Confidence 01235667778888888 889999999999999 88888888777766554
No 154
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.52 E-value=3.1e-15 Score=149.37 Aligned_cols=132 Identities=21% Similarity=0.252 Sum_probs=108.6
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
.|++.+.||+|+||.||+. ...+++.||+|++... ......+|+..+. .++||||+++++++...+..|+||||+
T Consensus 10 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~-~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 10 DYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVK-ECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHH-hcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 3899999999999998874 5677899999977532 2234567886554 459999999999999999999999999
Q ss_pred c-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 484 T-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 484 ~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+ ++|.+++.. ...+++..+..++.|+ |+|||+++|+||||| |++.+|.++...+.+.
T Consensus 89 ~~~~L~~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~ 153 (267)
T cd06646 89 GGGSLQDIYHV------TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVA 153 (267)
T ss_pred CCCcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccc
Confidence 8 599999876 4568889999999998 899999999999999 7888887776665543
No 155
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.52 E-value=1.1e-15 Score=151.33 Aligned_cols=131 Identities=26% Similarity=0.405 Sum_probs=108.7
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|++.+.||+|+||+||. ....+++.||+|++.... .....+|+..+..+ +||||+++++++......+++||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccc-cccccccccccccccccccccccc
Confidence 67889999999999888 466778899999766431 11234577666666 999999999999999999999999
Q ss_pred ccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 483 CTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 483 ~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|.+ +|.+++.. ...+++..+..++.|+ |.+||+++++||||| |++.+|......+.+.
T Consensus 80 ~~~~~L~~~l~~------~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~ 145 (260)
T PF00069_consen 80 CPGGSLQDYLQK------NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSS 145 (260)
T ss_dssp ETTEBHHHHHHH------HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTT
T ss_pred cccccccccccc------cccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 986 99999985 4668999999999999 889999999999999 7888888776666654
No 156
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.52 E-value=5.4e-15 Score=149.50 Aligned_cols=135 Identities=23% Similarity=0.234 Sum_probs=107.7
Q ss_pred eeeeecccccccCCceEEEe-----eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc--ce
Q 042769 407 KLFVSNTEIAKGSNGTVVYE-----GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDK--DF 475 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~-----~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~--~~ 475 (549)
+.|++.+.||+|+||.||.+ +..+++.||+|.+... ....+.+|+..+.. ++||||+++++++... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRN-LYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHh-CCCCCeeeeeeEEecCCCCc
Confidence 34788899999999998764 2456889999987632 23456788876655 4999999999998775 56
Q ss_pred EEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
.+++|||++ ++|.+++.+. ...+++..+..++.|+ |+|||+++++||||| |++.+|..+...+.+.+
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRN-----KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred eEEEEEccCCCCHHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCcccc
Confidence 899999997 5999998762 2357888999999998 899999999999999 77888887776666554
No 157
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.51 E-value=5.1e-15 Score=147.25 Aligned_cols=133 Identities=22% Similarity=0.242 Sum_probs=108.2
Q ss_pred eeecccccccCCceEEEeeeecCchhHHHHHHHH--HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-c
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRA--LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-C 485 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-G 485 (549)
|++.+.||+|+||.||.....++..+|+|.+.+. ....+.+|+..+..+ +||||+++++++...+..|++|||++ +
T Consensus 6 ~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd05059 6 LTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKL-SHPNLVQLYGVCTKQRPIFIVTEYMANG 84 (256)
T ss_pred cchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCceEEEEecCCCC
Confidence 7888999999999988754345678999987643 123566788666554 99999999999999999999999997 5
Q ss_pred chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 486 SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 486 sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+|.+++... ...+++..+..++.|+ |.|||+++++||||| +++.+|.++...+.+.+
T Consensus 85 ~L~~~l~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~ 148 (256)
T cd05059 85 CLLNYLRER-----KGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLAR 148 (256)
T ss_pred CHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccce
Confidence 999998762 2357888889999998 889999999999999 78888887777766554
No 158
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.51 E-value=7.9e-15 Score=145.98 Aligned_cols=135 Identities=20% Similarity=0.151 Sum_probs=109.0
Q ss_pred eeeecccccccCCceEEEeeeecCchhHHHHHHHH--HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 408 LFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRA--LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
.|++.++||+|+||.||+....+++.||+|.+... ..+.+.+|+..+.. ++|+||+++++++...+..+++|||+.
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05072 7 SIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKT-LQHDKLVRLYAVVTKEEPIYIITEYMAK 85 (261)
T ss_pred HeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHh-CCCCCeeeEEEEEcCCCCcEEEEecCCC
Confidence 38999999999999988865556778999977642 23456678866554 599999999999999999999999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.++++... ...+++..+..++.|+ |+|||+++++||||| |++.+|.+....+.+.+
T Consensus 86 ~~L~~~l~~~~----~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~ 151 (261)
T cd05072 86 GSLLDFLKSDE----GGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR 151 (261)
T ss_pred CcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccce
Confidence 69999997632 3457778888888888 899999999999999 78888877766665543
No 159
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.51 E-value=4.8e-15 Score=155.92 Aligned_cols=133 Identities=26% Similarity=0.315 Sum_probs=107.5
Q ss_pred eeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc------
Q 042769 406 GKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDK------ 473 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~------ 473 (549)
.+.|.+.+.||+|+||.||.+ +..+++.||||++... ......+|+..+ +.++||||+++++++...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM-KCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHH-HhcCCCCccccceeeccccccccc
Confidence 345999999999999998874 5677899999988642 233566788555 555999999999987543
Q ss_pred ceEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 474 DFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 474 ~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
...|+||||+.++|.+++.. .+++..+..++.|+ |+|||+++|+||||| |++.+|.+++..+++.
T Consensus 102 ~~~~lv~e~~~~~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMDANLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCCCCHHHHHHh--------cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 35799999999998888754 36778888899998 889999999999999 8889998888777766
Q ss_pred h
Q 042769 547 R 547 (549)
Q Consensus 547 r 547 (549)
+
T Consensus 174 ~ 174 (364)
T cd07875 174 R 174 (364)
T ss_pred c
Confidence 4
No 160
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.51 E-value=2.9e-15 Score=150.95 Aligned_cols=133 Identities=26% Similarity=0.294 Sum_probs=110.0
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|++.+.||+|+||.||. ....+|+.||+|++.... .....+|+..+.. ++||||+++++++.+....|+++||
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE-LKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHh-cCCCCeeeHHHHhccCCceEEEEec
Confidence 78889999999999887 466679999999876431 2245678866554 4999999999999999999999999
Q ss_pred cccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 483 CTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 483 ~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+.++|.+++... ...+++..++.++.|+ |.|||+++|+||||| +++.+|...+..+.+.+
T Consensus 81 ~~~~l~~~~~~~-----~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~ 147 (284)
T cd07839 81 CDQDLKKYFDSC-----NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLAR 147 (284)
T ss_pred CCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhh
Confidence 999999888652 3468999999999999 889999999999999 78888887777666544
No 161
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.51 E-value=6.1e-15 Score=146.62 Aligned_cols=131 Identities=22% Similarity=0.243 Sum_probs=108.2
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH--------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA--------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~--------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
|.+.+.||+|+||.||.. +..+++.||+|.+... ....+.+|+..+.+ ++||||+++++++...+..+++
T Consensus 4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~v 82 (263)
T cd06625 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKN-LQHERIVQYYGCLRDDETLSIF 82 (263)
T ss_pred ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHh-CCCCCeeeeEEEEccCCeEEEE
Confidence 888899999999998874 5677899999965421 12345678865555 5999999999999999999999
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|||++ ++|.+++.. ...+++..+..++.|+ |.|||+.+++||||+ +++.+|.+....+++.
T Consensus 83 ~e~~~~~~l~~~~~~------~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~ 151 (263)
T cd06625 83 MEYMPGGSVKDQLKA------YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGAS 151 (263)
T ss_pred EEECCCCcHHHHHHH------hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 99997 599999877 4468888899999998 889999999999999 8888888777766654
No 162
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.51 E-value=7.3e-15 Score=147.06 Aligned_cols=133 Identities=23% Similarity=0.202 Sum_probs=105.7
Q ss_pred eeecccccccCCceEEEe-eeecC---chhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEG---RPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g---~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
|++.+.||+|+||.||+. ...++ ..+|+|.+... ....+.+|+..+..+ +||||+++++++...+..|++|
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 84 (267)
T cd05066 6 IKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSKPVMIVT 84 (267)
T ss_pred eEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCccEEEE
Confidence 888899999999998874 33333 36888877532 233567788666554 9999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||++ |+|.+++... ...++...+..++.|+ |.|||+++++||||| |++.++.+.+..+.+.+
T Consensus 85 e~~~~~~L~~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~ 154 (267)
T cd05066 85 EYMENGSLDAFLRKH-----DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSR 154 (267)
T ss_pred EcCCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccc
Confidence 9997 5999999762 2457888889999888 889999999999999 78888877776665443
No 163
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.51 E-value=6.8e-15 Score=161.78 Aligned_cols=139 Identities=23% Similarity=0.274 Sum_probs=110.6
Q ss_pred eeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcc-----
Q 042769 406 GKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKD----- 474 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~----- 474 (549)
++.|.+.+.||+|+||+||++ ...+|+.||||++... ....+.+|+..+..+ +|+||++++..+...+
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~-~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNC-DFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcC-CCCcEEEeecceecccccCcc
Confidence 345999999999999998884 6678999999987542 233466788666554 9999999988765332
Q ss_pred ---eEEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhh
Q 042769 475 ---FVYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLL 543 (549)
Q Consensus 475 ---~~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~ 543 (549)
.+++||||++ |+|.++++... .....+++..+..++.|+ |.|||+++|+||||| |++.+|..++..+
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~--~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DF 187 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRA--KTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDF 187 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhh--ccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEec
Confidence 4789999997 69999997632 123468899999999999 889999999999999 8899998888877
Q ss_pred hhhh
Q 042769 544 SLMR 547 (549)
Q Consensus 544 ~Lmr 547 (549)
++.|
T Consensus 188 Gls~ 191 (496)
T PTZ00283 188 GFSK 191 (496)
T ss_pred ccCe
Confidence 7654
No 164
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.51 E-value=8.5e-15 Score=146.08 Aligned_cols=132 Identities=20% Similarity=0.231 Sum_probs=108.1
Q ss_pred eeecccccccCCceEEEeeeecCchhHHHHHHHH---------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRA---------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~---------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
|...+.||+|+||.||.....+++.+|+|.+... ....+.+|++.+..+ +|+||+++++++...+..+++
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeecCCeEEEE
Confidence 6778899999999988755567889999966521 123466788666555 999999999999999999999
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|||+. ++|.+++.+ ...+++..+..++.|+ |+|||+.+|+|+||+ +++++|.++...+.+++
T Consensus 81 ~e~~~~~~L~~~l~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 150 (265)
T cd06631 81 MEFVPGGSISSILNR------FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCAR 150 (265)
T ss_pred EecCCCCcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhH
Confidence 99997 499999976 4568888999999998 889999999999999 78888887777665543
No 165
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.51 E-value=3.6e-15 Score=151.50 Aligned_cols=133 Identities=25% Similarity=0.281 Sum_probs=108.4
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHHh--------hhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRALH--------DVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~~--------~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
|++.+.||+|+||.||+. ...+++.||||++..... ..+..|+..+.+ ++|+||+++++++.+.+..|+|
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQE-LKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhh-cCCCCChhhhheeecCCEEEEE
Confidence 778889999999998884 556789999998764321 234567765544 4899999999999999999999
Q ss_pred ecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 480 LERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 480 mE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|||+.|+|.+++... ...+++..+..++.|+ |.|||+++++||||| |++.+|...+..+.+.+
T Consensus 81 ~e~~~~~L~~~i~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~ 150 (298)
T cd07841 81 FEFMETDLEKVIKDK-----SIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLAR 150 (298)
T ss_pred EcccCCCHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeee
Confidence 999977999999761 1268899999999999 889999999999999 88888887776655543
No 166
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.50 E-value=4.7e-15 Score=170.25 Aligned_cols=138 Identities=22% Similarity=0.188 Sum_probs=109.2
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|++.++||+|+||.||.+ +..+|+.||+|++... ..+++.+|+..+.. ++||||+++++++.+.+..|++||
T Consensus 4 YeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~-L~HPNIVkl~~v~~d~~~lyLVME 82 (932)
T PRK13184 4 YDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAAD-LIHPGIVPVYSICSDGDPVYYTMP 82 (932)
T ss_pred eEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHh-CCCcCcCeEEEEEeeCCEEEEEEE
Confidence 899999999999998884 6677999999987642 23356788866554 599999999999999999999999
Q ss_pred ccc-cchhhhhhhcccC-----CcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDS-----SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~-----~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||+ |+|.+++...... .....++...+..++.|+ |+|||+++|+||||| |++.+|.+.+.++++.+
T Consensus 83 Y~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 83 YIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred cCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence 998 5999998752110 011234455677888888 889999999999999 88999988877776654
No 167
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.50 E-value=6e-15 Score=154.02 Aligned_cols=141 Identities=21% Similarity=0.227 Sum_probs=108.5
Q ss_pred eeeeecccccccCCceEEEe------eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccC-cce
Q 042769 407 KLFVSNTEIAKGSNGTVVYE------GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVEND-KDF 475 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~------~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~-~~~ 475 (549)
++|++.+.||+|+||.||.+ +..+++.||+|++... ..+.+.+|+..+.++.+|+||++++++|.. ...
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 35899999999999998874 2234688999987632 234566888777776689999999998764 456
Q ss_pred EEEEecccc-cchhhhhhhcccC-------------------------------------------------------Cc
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDS-------------------------------------------------------SC 499 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~-------------------------------------------------------~~ 499 (549)
++++|||+. |+|.+++...... ..
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 899999998 5999998653210 00
Q ss_pred ccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 500 NSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 500 ~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
...+++..+..++.|+ |+|||+++|+||||| |++.++..++..+.+++
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~ 221 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLAR 221 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccch
Confidence 1257778888899998 899999999999999 88888887777766665
No 168
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.50 E-value=1.2e-14 Score=148.64 Aligned_cols=142 Identities=20% Similarity=0.201 Sum_probs=109.4
Q ss_pred eeeeeecccccccCCceEEEee-e-------ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc
Q 042769 406 GKLFVSNTEIAKGSNGTVVYEG-I-------YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDK 473 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~~~-~-------~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~ 473 (549)
.+.|.+.+.||+|+||.||... . .++..||+|.+... ....+.+|+..+..+.+||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 3448899999999999988642 1 23457999987642 2335668886665554899999999999999
Q ss_pred ceEEEEecccc-cchhhhhhhcccCC----------cccccCchhhhHHhhhe---eecccceeEEEeecc----ccccC
Q 042769 474 DFVYLSLERCT-CSLDDLIQTYSDSS----------CNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKAD 535 (549)
Q Consensus 474 ~~~yLVmE~~~-GsL~~~L~~~~~~~----------~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~ 535 (549)
...|++|||+. |+|.+++...+... ....++...+..++.|+ |+|||+++++||||| |++.+
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~ 173 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTEN 173 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCC
Confidence 99999999997 69999998743211 12346677788888888 899999999999999 78888
Q ss_pred CCCchhhhhhhh
Q 042769 536 GHPSPLLLSLMR 547 (549)
Q Consensus 536 G~p~~~l~~Lmr 547 (549)
|.+++..+.+.+
T Consensus 174 ~~~kl~D~g~~~ 185 (304)
T cd05101 174 NVMKIADFGLAR 185 (304)
T ss_pred CcEEECCCccce
Confidence 887777766554
No 169
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.50 E-value=8.5e-15 Score=162.10 Aligned_cols=137 Identities=23% Similarity=0.299 Sum_probs=117.2
Q ss_pred eeeecccccccCCceEEE-eeeecCchhHHHHHHHH--HhhhhHHHHHHHHhcCCCCCeeEEeeeccC-----cceEEEE
Q 042769 408 LFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA--LHDVAFKEIQNLIASDQHPNIVRWYGVEND-----KDFVYLS 479 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~-----~~~~yLV 479 (549)
.|++.++||+|.+|.||+ +++.+++..|+|++... ..+....|..+|+....|||++.+||+|.. ++.+|||
T Consensus 20 ~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLV 99 (953)
T KOG0587|consen 20 IFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLV 99 (953)
T ss_pred ccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEE
Confidence 388999999999999988 68899999999988753 333455667678888899999999999863 5679999
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhhc
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRL 548 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd 548 (549)
||||. |+.-++++... ...+.|.++..|++.+ |.+||.+.+||||+| |+..+|..+.+.+.+.++
T Consensus 100 MEfC~gGSVTDLVKn~~----g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQ 172 (953)
T KOG0587|consen 100 MEFCGGGSVTDLVKNTK----GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 172 (953)
T ss_pred eeccCCccHHHHHhhhc----ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeee
Confidence 99998 69999998855 5679999999999988 889999999999999 899999999988877654
No 170
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.50 E-value=8e-15 Score=148.66 Aligned_cols=134 Identities=19% Similarity=0.178 Sum_probs=108.5
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHHHh----hhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRALH----DVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~~----~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
.|.+.+.||+|+||.||.+ ...+|+.||+|++..... ....+|+..+.. ++|+||+++++++...+..|+||||
T Consensus 6 ~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~-l~h~ni~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07870 6 SYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKG-LKHANIVLLHDIIHTKETLTFVFEY 84 (291)
T ss_pred eeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHh-cCCCCEeEEEEEEecCCeEEEEEec
Confidence 4999999999999998874 567789999998864321 135678866555 5999999999999999999999999
Q ss_pred cccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 483 CTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 483 ~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+.++|.+++... ...+++..+..++.|+ |.|||+++|+||||| |++.+|.+.+..+++.+
T Consensus 85 ~~~~l~~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~ 151 (291)
T cd07870 85 MHTDLAQYMIQH-----PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLAR 151 (291)
T ss_pred ccCCHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEecccccc
Confidence 998888877651 2346777888888888 889999999999999 78888887777666543
No 171
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.50 E-value=8.5e-15 Score=147.41 Aligned_cols=135 Identities=21% Similarity=0.235 Sum_probs=110.4
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
|+..+.||.|++|.||.+ ...+|+.||||.+.... .....+|+..+..+ +||||+++++++...+..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKEL-KHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhh-cCCCEeeeeeeEeeCCcEEEEEecC
Confidence 788899999999998884 55678999999776431 23456788666554 9999999999999999999999999
Q ss_pred ccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 484 TCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 484 ~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
.|+|.+++.... ....+++..+..++.|+ |+|||+++++||||| +++.+|......+.+++
T Consensus 81 ~~~l~~~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 81 DKDLKKYMDTHG---VRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred CccHHHHHHhcC---CCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 999999887632 12458899999999999 889999999999999 78888877766665543
No 172
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.50 E-value=1e-14 Score=146.00 Aligned_cols=133 Identities=23% Similarity=0.210 Sum_probs=101.5
Q ss_pred ccccccCCceEEEeeee---cCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVYEGIY---EGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~~~~---~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
++||+|+||.||+.... ....+|+|.+... ....+.+|+..+. .++||||+++++.+......|+||||+.
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~-~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYR-ELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHH-hCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 36999999998874322 3456888876533 1234567886554 4599999999999999999999999998
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.+++...+.. .....++..+..++.|+ |+|||+++|+||||| |++.++.+++..+.+.+
T Consensus 80 g~L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 148 (269)
T cd05042 80 GDLKNYLRSNRGM-VAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLAL 148 (269)
T ss_pred CcHHHHHHhcccc-ccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEecccccc
Confidence 6999999874311 11234567778888888 899999999999999 88888888777766543
No 173
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.50 E-value=8.5e-15 Score=156.80 Aligned_cols=139 Identities=21% Similarity=0.188 Sum_probs=106.1
Q ss_pred eeecccccccCCceEEEee------eecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEE
Q 042769 409 FVSNTEIAKGSNGTVVYEG------IYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYL 478 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~------~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yL 478 (549)
|.+.+.||+|+||.||.+. ...++.||+|++... ..+.+.+|+..|.++..|||||+++++|...+..++
T Consensus 39 ~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~i 118 (401)
T cd05107 39 LVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYI 118 (401)
T ss_pred eehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEE
Confidence 7788999999999988742 234568999988743 123566888777666459999999999999999999
Q ss_pred Eecccc-cchhhhhhhcccC------------------------------------------------------------
Q 042769 479 SLERCT-CSLDDLIQTYSDS------------------------------------------------------------ 497 (549)
Q Consensus 479 VmE~~~-GsL~~~L~~~~~~------------------------------------------------------------ 497 (549)
|||||. |+|.++++..+..
T Consensus 119 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (401)
T cd05107 119 ITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGT 198 (401)
T ss_pred EEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhh
Confidence 999997 6999999764310
Q ss_pred --------------------------------CcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCC
Q 042769 498 --------------------------------SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHP 538 (549)
Q Consensus 498 --------------------------------~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p 538 (549)
.....+++..+..++.|+ |+|||+++++||||| |++.++.+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~ 278 (401)
T cd05107 199 VKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLV 278 (401)
T ss_pred hhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEE
Confidence 011234555667788888 889999999999999 77877777
Q ss_pred chhhhhhhh
Q 042769 539 SPLLLSLMR 547 (549)
Q Consensus 539 ~~~l~~Lmr 547 (549)
+...+.+.+
T Consensus 279 kL~DfGla~ 287 (401)
T cd05107 279 KICDFGLAR 287 (401)
T ss_pred EEEecCcce
Confidence 776666543
No 174
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.50 E-value=1.2e-14 Score=144.95 Aligned_cols=135 Identities=21% Similarity=0.300 Sum_probs=108.1
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHH------HHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVR------ALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~------~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|++.+.||+|+||.||.. ...+++.||||.+.. .....+.+|+..+..+ +||||+++++++...+..+++||
T Consensus 4 ~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08228 4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHPNVIKYLDSFIEDNELNIVLE 82 (267)
T ss_pred eeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-CCcceeeeeeeEEECCeEEEEEE
Confidence 899999999999998874 567899999996542 1223456788665554 99999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|+. |+|.+++..... ....+++..+..++.|+ |.|||+++++||||| |++.+|.+....+++.
T Consensus 83 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~ 153 (267)
T cd08228 83 LADAGDLSQMIKYFKK--QKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLG 153 (267)
T ss_pred ecCCCcHHHHHHHhhh--ccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccc
Confidence 998 599988865321 12457888889999998 899999999999999 7888888777666543
No 175
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.50 E-value=1.3e-14 Score=146.39 Aligned_cols=134 Identities=25% Similarity=0.214 Sum_probs=106.7
Q ss_pred eeeecccccccCCceEEEe-----eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccC--cceEE
Q 042769 408 LFVSNTEIAKGSNGTVVYE-----GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVEND--KDFVY 477 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-----~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~--~~~~y 477 (549)
.|++.+.||+|+||.||.. +..+++.||+|++... ....+.+|++.+.. ++||||+++++++.. ....+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHh-CCCCCeeEEEEEEccCCCCceE
Confidence 4888899999999998873 2346889999987643 23356688876655 499999999998643 34689
Q ss_pred EEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 478 LSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+||||++ |+|.+++... ...+++..+..++.|+ |+|||+++++||||| |++.+|.++...+.+.+
T Consensus 84 lv~e~~~~~~L~~~l~~~-----~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~ 156 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH-----RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTK 156 (284)
T ss_pred EEEEecCCCCHHHHHHhc-----CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccc
Confidence 9999997 6999999762 2357888899999998 899999999999999 88888888777666544
No 176
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.49 E-value=9e-15 Score=146.89 Aligned_cols=133 Identities=22% Similarity=0.232 Sum_probs=107.2
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCc--ceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDK--DFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~--~~~yLVmE 481 (549)
|++.+.||+|+||.||+. ...+++.||+|++.... .....+|+..+.++.+||||+++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567789999999998874 56678999999887532 123346887777776799999999999987 88999999
Q ss_pred ccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|++|+|.+++... ...+++..++.++.|+ |+|||+++++||||| +++. |..+...+.+.+
T Consensus 81 ~~~~~l~~~l~~~-----~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 81 LMDMNLYELIKGR-----KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred cCCccHHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEeccccc
Confidence 9999999888762 2468899999999998 889999999999999 6666 777666655543
No 177
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.49 E-value=1.9e-14 Score=144.05 Aligned_cols=131 Identities=26% Similarity=0.322 Sum_probs=106.2
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH-------------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-------------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKD 474 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-------------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~ 474 (549)
|...+.||.|+||.||.. ...+|+.+|+|.+... ..+.+.+|+..+ +.++||||+++++++...+
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETL-KDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHH-HhcCCCCcceEEEEeccCC
Confidence 778889999999998874 5567899999976421 112345677555 4559999999999999999
Q ss_pred eEEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 475 FVYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 475 ~~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
..++||||+. |+|.++++. .+.+++..+..++.|+ |.|||+++++||||+ +++.+|.+....+.+.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~------~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRT------YGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhh------ccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccc
Confidence 9999999997 599999977 3568888899998888 889999999999999 7788887776655543
No 178
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.49 E-value=1.4e-14 Score=164.87 Aligned_cols=133 Identities=27% Similarity=0.377 Sum_probs=106.4
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeec-------------
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVE------------- 470 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~------------- 470 (549)
|+....||+|+||.||+ +++.+|+.||||+|.-. ......+|+..| +.++||||||+|..+
T Consensus 481 FEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~L-ArLnHpNVVRYysAWVEs~~~~~~~ei~ 559 (1351)
T KOG1035|consen 481 FEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLL-ARLNHPNVVRYYSAWVESTAELTVLEIV 559 (1351)
T ss_pred hHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHH-hhcCCcceeeeehhhhccCCcccccccc
Confidence 88899999999999999 69999999999998843 233577899555 556999999999750
Q ss_pred --------------------------------------------------------------------------------
Q 042769 471 -------------------------------------------------------------------------------- 470 (549)
Q Consensus 471 -------------------------------------------------------------------------------- 470 (549)
T Consensus 560 ~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~ 639 (1351)
T KOG1035|consen 560 ASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGS 639 (1351)
T ss_pred ccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCc
Confidence
Q ss_pred -------------------cC-------cceEEEEeccccc-chhhhhhhcccCCccccc-CchhhhHHhhhe---eecc
Q 042769 471 -------------------ND-------KDFVYLSLERCTC-SLDDLIQTYSDSSCNSVF-GEDQATRAMIEY---KLRL 519 (549)
Q Consensus 471 -------------------~~-------~~~~yLVmE~~~G-sL~~~L~~~~~~~~~~~l-~~~~~~~i~~qi---L~yL 519 (549)
.. ...+||-||||+- .|.+++++ +... ....++++++|| |.|+
T Consensus 640 ~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~------N~~~~~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 640 VILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR------NHFNSQRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred cccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh------cccchhhHHHHHHHHHHHHHHHHH
Confidence 00 0247999999986 66666665 2222 467889999999 8899
Q ss_pred cceeEEEeecc----ccccCCCCchhhhhhhhc
Q 042769 520 DSVKVIIRDLS----LWKADGHPSPLLLSLMRL 548 (549)
Q Consensus 520 H~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd 548 (549)
|++|||||||| +++++++.++=.++|+.|
T Consensus 714 H~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~ 746 (1351)
T KOG1035|consen 714 HDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATD 746 (1351)
T ss_pred HhCceeeccCCcceeEEcCCCCeeecccccchh
Confidence 99999999999 789998888888888765
No 179
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.49 E-value=8.7e-15 Score=146.16 Aligned_cols=134 Identities=22% Similarity=0.170 Sum_probs=109.5
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH--hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL--HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~--~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
|.+.+.||+|+||.||+. ...+++.||+|++.... ...+.+|+..+.. ++||||+++++++......+++|||++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (263)
T cd05052 8 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE-IKHPNLVQLLGVCTREPPFYIITEFMTY 86 (263)
T ss_pred eEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHh-CCCCChhheEEEEcCCCCcEEEEEeCCC
Confidence 788899999999998774 45668899999876432 2356778866655 499999999999999999999999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
++|.+++.... ...+++..++.++.|+ |+|||+++++||||| |++.++.+.+..+.+++
T Consensus 87 ~~L~~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 87 GNLLDYLRECN----RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred CcHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 69999987632 3457888888899998 899999999999999 78888887777666543
No 180
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.49 E-value=6.8e-15 Score=146.68 Aligned_cols=122 Identities=20% Similarity=0.310 Sum_probs=101.8
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH---------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEE
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA---------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYL 478 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~---------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yL 478 (549)
|+..+.||+|+||.||. .+..+++.||+|.+... ....+.+|+..+.. ++|+||+++++++...+..++
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMAR-LNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHH-cCCCceehhhceeccCCeEEE
Confidence 67788999999999887 46678999999977632 13456678866655 599999999999999999999
Q ss_pred Eeccccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCC
Q 042769 479 SLERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGH 537 (549)
Q Consensus 479 VmE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~ 537 (549)
+|||+.| +|.+++.. ...+++..+..++.|+ |.|||+++++||||| +++.+|.
T Consensus 81 v~e~~~~~~L~~~l~~------~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~ 141 (268)
T cd06630 81 FVEWMAGGSVSHLLSK------YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQ 141 (268)
T ss_pred EEeccCCCcHHHHHHH------hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC
Confidence 9999985 99999976 4568889999999999 889999999999999 6666654
No 181
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.49 E-value=1.2e-14 Score=149.04 Aligned_cols=138 Identities=22% Similarity=0.242 Sum_probs=108.6
Q ss_pred eeecccccccCCceEEEe-eeecCc--hhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGR--PVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~--~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|++.+.||+|+||.||++ ...++. .+|+|.+... ....+.+|+..+.++.+||||+++++++...+..|++||
T Consensus 9 ~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 88 (303)
T cd05088 9 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE 88 (303)
T ss_pred ceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEE
Confidence 888899999999998885 444554 4577765532 233566788777776689999999999999999999999
Q ss_pred ccc-cchhhhhhhcccC----------CcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhh
Q 042769 482 RCT-CSLDDLIQTYSDS----------SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLL 543 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~----------~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~ 543 (549)
|++ |+|.++++..... .....+++..++.++.|+ |+|||+++++||||| |++.++.+++..+
T Consensus 89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~df 168 (303)
T cd05088 89 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADF 168 (303)
T ss_pred eCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCcc
Confidence 997 6999999763311 112357888899999998 899999999999999 8888888877766
Q ss_pred hhh
Q 042769 544 SLM 546 (549)
Q Consensus 544 ~Lm 546 (549)
.+.
T Consensus 169 g~~ 171 (303)
T cd05088 169 GLS 171 (303)
T ss_pred ccC
Confidence 654
No 182
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.49 E-value=1.8e-14 Score=157.58 Aligned_cols=133 Identities=23% Similarity=0.206 Sum_probs=111.7
Q ss_pred eeecccccccCCceEEEeee----ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 409 FVSNTEIAKGSNGTVVYEGI----YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~----~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
..+.++||.|.||.|+...+ .....||||.++.. ....++.|..+| -..+||||++|.|+......+.||.
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIM-GQFdHPNIIrLEGVVTks~PvMIiT 709 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIM-GQFDHPNIIRLEGVVTKSKPVMIIT 709 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhc-ccCCCCcEEEEEEEEecCceeEEEh
Confidence 45567999999999887433 22467999999853 233567787555 4459999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|||+ |+|+.||+.+ .+.++..+...+++.| ++||-++++|||||- |+++|=-++..+++|.|
T Consensus 710 EyMENGsLDsFLR~~-----DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSR 779 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQN-----DGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSR 779 (996)
T ss_pred hhhhCCcHHHHHhhc-----CCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEecccccee
Confidence 9996 9999999983 4668889999999998 999999999999998 99999999999999887
No 183
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.49 E-value=5.3e-15 Score=147.76 Aligned_cols=132 Identities=24% Similarity=0.309 Sum_probs=107.9
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
.|.+.+.||+|+||.||.. ...+++.||+|.+... ......+|+..+ +.++||||+++++++...+..|++||||
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~-~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMM-KDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHH-HhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 3888899999999998874 5567899999976532 223456787554 4459999999999999999999999999
Q ss_pred c-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 484 T-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 484 ~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+ ++|.+++.. .+.+++..++.++.|+ |.|||+++++||||| +++.+|......+++.
T Consensus 89 ~~~~L~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~ 153 (267)
T cd06645 89 GGGSLQDIYHV------TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVS 153 (267)
T ss_pred CCCcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceee
Confidence 8 599999876 4568999999999998 889999999999999 7788887666655543
No 184
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.49 E-value=5.9e-15 Score=146.64 Aligned_cols=132 Identities=22% Similarity=0.211 Sum_probs=110.1
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|++.+.||.|+||.||.. ...+++.||+|.+.+. ....+.+|++.+.. ++||||+++++++......|++||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQE-LNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHh-CCCCChHHHHHhhcCCCeEEEEEe
Confidence 788899999999998884 5567899999977643 23456678866554 599999999999999999999999
Q ss_pred cccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+.| +|.+++.. ...+++..+..++.|+ |.|||+++++|+||+ +++++|.+....+.+++
T Consensus 81 ~~~~~~L~~~l~~------~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~ 148 (258)
T cd05578 81 LLLGGDLRYHLSQ------KVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIAT 148 (258)
T ss_pred CCCCCCHHHHHHh------cCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeeccccc
Confidence 9975 99999977 3468889999999999 889999999999999 88888888777666553
No 185
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.49 E-value=1.6e-14 Score=148.80 Aligned_cols=133 Identities=25% Similarity=0.270 Sum_probs=104.2
Q ss_pred eeeecccccccCCceEEEe-eeecCc----hhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEE
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGR----PVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYL 478 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~----~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yL 478 (549)
.|+..+.||+|+||.||+. ...+++ .||+|.+... ..+.+.+|+..+ +.++||||+++++++... ..++
T Consensus 8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHH-HhCCCCCCCeEEEEEcCC-Ccee
Confidence 3899999999999998874 333444 4899987632 234566777554 555999999999999865 5678
Q ss_pred Eecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 479 SLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 479 VmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
++||+. |+|.+++... ...+++..+..++.|+ |+|||+++|+||||| |++.++.+++..+++.+
T Consensus 86 v~e~~~~g~l~~~l~~~-----~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~ 157 (316)
T cd05108 86 ITQLMPFGCLLDYVREH-----KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (316)
T ss_pred eeecCCCCCHHHHHHhc-----cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccc
Confidence 999997 7999999862 2357788888899998 899999999999999 88888888777776654
No 186
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.49 E-value=1.6e-14 Score=144.22 Aligned_cols=132 Identities=21% Similarity=0.229 Sum_probs=106.4
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH--------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc--ceEE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA--------LHDVAFKEIQNLIASDQHPNIVRWYGVENDK--DFVY 477 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~--------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~--~~~y 477 (549)
|.+.+.||+|+||.||.. ...+++.||+|.+... ....+.+|++.+.++ +||||+++++++.+. ..++
T Consensus 4 ~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~ 82 (265)
T cd06652 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDPMERTLS 82 (265)
T ss_pred ceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccCCCceEE
Confidence 888899999999998873 5677899999976421 123456788666555 999999999988763 4688
Q ss_pred EEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 478 LSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
++|||++ |+|.+++.. ...+++..+..++.|+ |+|||+++++||||| |++.+|.++...+.+.+
T Consensus 83 ~v~e~~~~~~L~~~l~~------~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 83 IFMEHMPGGSIKDQLKS------YGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred EEEEecCCCcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccc
Confidence 9999997 599999876 3457888889999988 899999999999999 88888888877766543
No 187
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.49 E-value=8.3e-15 Score=147.47 Aligned_cols=133 Identities=24% Similarity=0.289 Sum_probs=107.2
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
.|+..+.||+|+||.||+. ...+|+.||+|++.... .+.+.+|+..+.. ++||||+++++++......+++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQ-LKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHh-CCCCCEeeeeeEEeeCCEEEEEEe
Confidence 3888999999999998874 55678999999775431 2235678866555 599999999999999999999999
Q ss_pred cccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+++ .|..++.. ...+++..++.++.|+ |+|||+++++||||| +++.+|..++..+.+.+
T Consensus 81 ~~~~~~l~~~~~~------~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 148 (286)
T cd07847 81 YCDHTVLNELEKN------PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFAR 148 (286)
T ss_pred ccCccHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccce
Confidence 9986 56555544 3458899999999999 899999999999999 78888887777666543
No 188
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.49 E-value=9.4e-15 Score=145.61 Aligned_cols=135 Identities=21% Similarity=0.182 Sum_probs=109.7
Q ss_pred eeeecccccccCCceEEEeeeecCchhHHHHHHHHH--hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 408 LFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL--HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~--~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
.|++.+.||+|+||.||+.....++.||+|.+.... .+.+.+|+..+.++ +||||+++++++...+..|++|||+.
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05068 7 SIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKL-RHPKLIQLYAVCTLEEPIYIVTELMKY 85 (261)
T ss_pred heeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHC-CCCCccceeEEEecCCCeeeeeecccC
Confidence 388899999999999887544456789999876432 33566788666555 89999999999999999999999996
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
++|.+++.... ...+++..+..++.|+ |.|||+++++||||| |++.+|.+....+.+.+
T Consensus 86 ~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~ 151 (261)
T cd05068 86 GSLLEYLQGGA----GRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLAR 151 (261)
T ss_pred CcHHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEE
Confidence 69999997622 2457888899999998 889999999999999 88888887777666543
No 189
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.49 E-value=1.9e-14 Score=147.38 Aligned_cols=139 Identities=21% Similarity=0.206 Sum_probs=107.8
Q ss_pred eeeecccccccCCceEEEe-ee-------ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcce
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GI-------YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDF 475 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~-------~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~ 475 (549)
.|.+.+.||+|+||.||.. .. .+...+|+|.+... ....+.+|+..+..+.+||||+++++++...+.
T Consensus 19 ~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 98 (307)
T cd05098 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP 98 (307)
T ss_pred HeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence 4999999999999998863 22 12356999988742 223466788766666589999999999999999
Q ss_pred EEEEecccc-cchhhhhhhcccCC----------cccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCC
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSS----------CNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGH 537 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~----------~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~ 537 (549)
.|++|||+. |+|.+++..++... ....++...++.++.|+ |+|||+++++||||| |++.+|.
T Consensus 99 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~ 178 (307)
T cd05098 99 LYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 178 (307)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCc
Confidence 999999997 69999998743211 11347778888999998 899999999999999 7888887
Q ss_pred Cchhhhhhh
Q 042769 538 PSPLLLSLM 546 (549)
Q Consensus 538 p~~~l~~Lm 546 (549)
..+..+.+.
T Consensus 179 ~kL~dfg~a 187 (307)
T cd05098 179 MKIADFGLA 187 (307)
T ss_pred EEECCCccc
Confidence 766655544
No 190
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.49 E-value=9.2e-15 Score=145.00 Aligned_cols=134 Identities=20% Similarity=0.284 Sum_probs=108.5
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHH----HHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVR----ALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~----~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
|++.+.||+|+||.||. .+..+++.+|+|.+.. ...+...+|+..+ +.++||||+++++++...+..|++|||+
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLL-AKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHH-HhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 78889999999999887 4667889999996642 1234566777555 4559999999999999999999999999
Q ss_pred c-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 484 T-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 484 ~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+ |+|.+++.... ...+++..+..++.|+ |.|||+++|+|+||| |++.+|......+.+++
T Consensus 81 ~~~~l~~~~~~~~----~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~ 148 (255)
T cd08219 81 DGGDLMQKIKLQR----GKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSAR 148 (255)
T ss_pred CCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcce
Confidence 7 59999887522 3457888999999999 899999999999999 78888877766665543
No 191
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.49 E-value=1.4e-14 Score=146.84 Aligned_cols=132 Identities=22% Similarity=0.173 Sum_probs=108.2
Q ss_pred eeecccccccCCceEEEee----eecCchhHHHHHHHHH-------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEE
Q 042769 409 FVSNTEIAKGSNGTVVYEG----IYEGRPVAVKRLVRAL-------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVY 477 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~----~~~g~~VAVK~i~~~~-------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~y 477 (549)
|++.+.||+|+||.||... ..+|+.||+|++.... .+...+|+..+..+.+|+||+++++++..+...|
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 7788999999999988742 2478899999876431 2345678876766657999999999999999999
Q ss_pred EEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 478 LSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+||||++ ++|.+++.. ...+++..+..++.|+ |.|||+.+++||||| |++.+|.+.+..+.+.
T Consensus 82 lv~e~~~~~~L~~~l~~------~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 152 (290)
T cd05613 82 LILDYINGGELFTHLSQ------RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS 152 (290)
T ss_pred EEEecCCCCcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccc
Confidence 9999998 599999976 4568888888888888 899999999999999 8888888777666554
No 192
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.49 E-value=6.5e-15 Score=147.44 Aligned_cols=132 Identities=31% Similarity=0.401 Sum_probs=105.1
Q ss_pred ecccccccCCceEEEeeee-----cCchhHHHHHHH----HHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 411 SNTEIAKGSNGTVVYEGIY-----EGRPVAVKRLVR----ALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 411 ~~~~LG~G~fG~V~~~~~~-----~g~~VAVK~i~~----~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
+.+.||.|+||.|+.+... .+..|+||.++. +..+.+.+|++.+.++ +||||++++|++...+..++|||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc-ccccccccccccccccccccccc
Confidence 4578999999998874332 367899998853 2245677888777666 99999999999998888999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||. |+|.++|.... ...+++.....++.|+ |.|||+++++|+||+ |++.++.+++..+.+++
T Consensus 82 ~~~~g~L~~~L~~~~----~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~ 151 (259)
T PF07714_consen 82 YCPGGSLDDYLKSKN----KEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSR 151 (259)
T ss_dssp --TTEBHHHHHHHTC----TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGE
T ss_pred ccccccccccccccc----ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 997 79999999831 3568889999999999 899999999999999 78999988877776665
No 193
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.49 E-value=1.4e-14 Score=146.22 Aligned_cols=131 Identities=26% Similarity=0.181 Sum_probs=104.5
Q ss_pred eeecccccccCCceEEEe-----eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccC--cceEE
Q 042769 409 FVSNTEIAKGSNGTVVYE-----GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVEND--KDFVY 477 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-----~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~--~~~~y 477 (549)
|+..+.||+|+||+||.. ...+++.||+|.+... ....+.+|++.+.++ +||||+++++++.. ....+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL-YHENIVKYKGCCSEQGGKGLQ 84 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCceEE
Confidence 488899999999998652 2346788999987643 233566788766554 99999999998765 34689
Q ss_pred EEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 478 LSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
++|||++ |+|.+++.. ..+++.+++.++.|+ |.|||+++|+||||| |++.++.+....+++.+
T Consensus 85 lv~e~~~~~~l~~~~~~-------~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~ 155 (283)
T cd05080 85 LIMEYVPLGSLRDYLPK-------HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 155 (283)
T ss_pred EEecCCCCCCHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeeccccc
Confidence 9999998 599999876 348999999999998 889999999999999 78888887777666543
No 194
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.48 E-value=8.7e-15 Score=147.52 Aligned_cols=133 Identities=24% Similarity=0.281 Sum_probs=110.0
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|+..+.||.|+||.||++ ...+++.||||++.... ...+.+|++.+.++ +||||+++++++...+..+++|||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhc-CCCCCcchhhhcccCCcEEEEeec
Confidence 788899999999998884 55678999999876431 23466788666555 999999999999999999999999
Q ss_pred cccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 483 CTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 483 ~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+.++|.+++.... ...+++..+..++.|+ |+|||+++++||||+ +++.+|.+....+.+.
T Consensus 81 ~~~~l~~~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~ 147 (284)
T cd07860 81 LHQDLKKFMDASP----LSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 147 (284)
T ss_pred cccCHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccch
Confidence 9889999887622 3568888999999998 899999999999999 8888888777666554
No 195
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.48 E-value=1.4e-14 Score=146.86 Aligned_cols=137 Identities=22% Similarity=0.243 Sum_probs=108.1
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcce-----E
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDF-----V 476 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~-----~ 476 (549)
.|++.+.||+|+||.||+. ...+++.||+|.+.... ...+.+|+..+..+.+||||+++++++...+. .
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 3888899999999998874 56678999999876542 13466788777776567999999999887665 8
Q ss_pred EEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----cccc-CCCCchhhhhh
Q 042769 477 YLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKA-DGHPSPLLLSL 545 (549)
Q Consensus 477 yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~-~G~p~~~l~~L 545 (549)
|++|||+.++|.+++...... ....+++..++.++.|+ |.|||+++|+||||| +++. +|..++..+.+
T Consensus 82 ~lv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~ 157 (295)
T cd07837 82 YLVFEYLDSDLKKFMDSNGRG-PGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGL 157 (295)
T ss_pred EEEeeccCcCHHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccc
Confidence 999999999999988763311 12458899999999999 899999999999999 6776 66665555544
No 196
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.48 E-value=9.4e-15 Score=151.57 Aligned_cols=134 Identities=19% Similarity=0.275 Sum_probs=108.6
Q ss_pred eeeeee-cccccccCCceEEEe-eeecCchhHHHHHHHHHhh-----------------hhHHHHHHHHhcCCCCCeeEE
Q 042769 406 GKLFVS-NTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRALHD-----------------VAFKEIQNLIASDQHPNIVRW 466 (549)
Q Consensus 406 gk~y~~-~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~~~-----------------~~~~Ei~~L~~~l~HpNIVrl 466 (549)
.++|.. .+.||.|+||.||.. +..+++.||||.+...... .+.+|+..+.. ++||||+++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~ 85 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNE-IKHENIMGL 85 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHh-CCCcceeee
Confidence 344654 678999999998884 5667999999977543111 25578866555 499999999
Q ss_pred eeeccCcceEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCc
Q 042769 467 YGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPS 539 (549)
Q Consensus 467 ~g~~~~~~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~ 539 (549)
++++...+..|++|||+.|+|.+++.. ...+++..+..++.|+ |+|||+++++||||| |++.+|...
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~l~~~l~~------~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 86 VDVYVEGDFINLVMDIMASDLKKVVDR------KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred eEEEecCCcEEEEEeccccCHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEE
Confidence 999999999999999999999999876 4568899999999999 899999999999999 788888777
Q ss_pred hhhhhhh
Q 042769 540 PLLLSLM 546 (549)
Q Consensus 540 ~~l~~Lm 546 (549)
...+++.
T Consensus 160 l~dfg~~ 166 (335)
T PTZ00024 160 IADFGLA 166 (335)
T ss_pred ECCccce
Confidence 6666544
No 197
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.48 E-value=6.4e-15 Score=147.37 Aligned_cols=136 Identities=24% Similarity=0.306 Sum_probs=109.5
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHH--HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc------ceEEE
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA--LHDVAFKEIQNLIASDQHPNIVRWYGVENDK------DFVYL 478 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~------~~~yL 478 (549)
.|++.+.||+|+||.||.. ...+++.||+|++... ......+|+..+....+||||+++++++... ...|+
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~i 86 (272)
T cd06637 7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 86 (272)
T ss_pred hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEE
Confidence 4888899999999998874 5567889999987543 1234667887676666899999999998642 46899
Q ss_pred Eecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 479 SLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 479 VmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+|||+. |+|.+++...+ ...+++..+..++.|+ |.|||+++|+||||| +++.++.+....+.+++
T Consensus 87 v~e~~~~~~L~~~l~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 87 VMEFCGAGSVTDLIKNTK----GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 159 (272)
T ss_pred EEEcCCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCce
Confidence 999997 59999987622 3458888899999998 899999999999999 88888888777776654
No 198
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.48 E-value=2e-14 Score=145.20 Aligned_cols=138 Identities=21% Similarity=0.173 Sum_probs=107.0
Q ss_pred eeecccccccCCceEEEee-----eecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 409 FVSNTEIAKGSNGTVVYEG-----IYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~-----~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
|++.+.||+|+||.||+.. ..+++.+|+|.+... ....+.+|+..+.+ ++||||+++++++......|++
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv 85 (283)
T cd05090 7 VRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAE-LHHPNIVCLLGVVTQEQPVCML 85 (283)
T ss_pred ceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhh-CCCCCeeeEEEEEecCCceEEE
Confidence 7888999999999988742 345678999988632 22356678865555 4999999999999999999999
Q ss_pred ecccc-cchhhhhhhcccC-----------CcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCch
Q 042769 480 LERCT-CSLDDLIQTYSDS-----------SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSP 540 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~-----------~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~ 540 (549)
|||+. |+|.+++...... .....+++..+..++.|+ |+|||+++++||||| |++.++.++.
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl 165 (283)
T cd05090 86 FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKI 165 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEe
Confidence 99997 5999998642210 012346777888888888 899999999999999 8888887777
Q ss_pred hhhhhhh
Q 042769 541 LLLSLMR 547 (549)
Q Consensus 541 ~l~~Lmr 547 (549)
..+.+.+
T Consensus 166 ~dfg~~~ 172 (283)
T cd05090 166 SDLGLSR 172 (283)
T ss_pred ccccccc
Confidence 7666553
No 199
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.48 E-value=1.4e-14 Score=147.16 Aligned_cols=136 Identities=22% Similarity=0.243 Sum_probs=109.7
Q ss_pred ceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 405 VGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
..+.|++.+.||+|+||.||. .+..+++.+|+|.+... ..+.+.+|+..+.. ++||||+++++++..+...|+||
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILAT-CNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHh-CCCCcEeeeEEEEEeCCeEEEEE
Confidence 345599999999999999888 45667899999987643 23356678866544 59999999999999999999999
Q ss_pred ccccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 481 ERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 481 E~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
||+.| +|..++... ...+++..+..++.|+ |.|||+++++||||| +++.+|...+..+.+.
T Consensus 89 e~~~~~~l~~~~~~~-----~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~ 157 (292)
T cd06644 89 EFCPGGAVDAIMLEL-----DRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVS 157 (292)
T ss_pred ecCCCCcHHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccc
Confidence 99985 888777551 3458889999999998 889999999999999 7788887777666543
No 200
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.48 E-value=1.2e-14 Score=148.53 Aligned_cols=133 Identities=26% Similarity=0.329 Sum_probs=109.2
Q ss_pred eeeeecccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 407 KLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
+.|.+.+.||+|+||.||+. +..+++.||+|.+... ..+.+.+|+..+ +.++||||+++++++...+..|+||||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l-~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVM-RENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHH-HhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 44999999999999998774 5678999999977532 233456787555 445999999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
++ ++|.+++.. ..+++..+..++.|+ |.|||+.+++||||| |++.+|.+....+.+++
T Consensus 98 ~~~~~L~~~~~~-------~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~ 163 (297)
T cd06656 98 LAGGSLTDVVTE-------TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA 163 (297)
T ss_pred cCCCCHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccce
Confidence 97 599999865 347788888888888 889999999999999 88888888777776543
No 201
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.48 E-value=2.2e-14 Score=142.22 Aligned_cols=133 Identities=19% Similarity=0.233 Sum_probs=109.2
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHH-----HHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVR-----ALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~-----~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|+..+.||+|+||.|+. ++..+++.+++|.+.. .....+.+|+..+.. ++|+||+++++++...+..+++|||
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSL-LQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHh-CCCCCeeEEEeEEecCCeEEEEEEe
Confidence 88899999999998876 5677889999996543 233456788866655 4999999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|+ |+|.+++.... ...+++..+..++.|+ |.|||+.+++||||+ +++.++.++...+.+.
T Consensus 81 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 81 ANGGTLYDKIVRQK----GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred cCCCcHHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcce
Confidence 98 59999997632 3458888999999888 889999999999999 7788888777665543
No 202
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.48 E-value=1e-14 Score=149.88 Aligned_cols=135 Identities=20% Similarity=0.186 Sum_probs=101.3
Q ss_pred cccccccCCceEEEee-e--ecCchhHHHHHHHHH-hhhhHHHHHHHHhcCCCCCeeEEeeeccC--cceEEEEeccccc
Q 042769 412 NTEIAKGSNGTVVYEG-I--YEGRPVAVKRLVRAL-HDVAFKEIQNLIASDQHPNIVRWYGVEND--KDFVYLSLERCTC 485 (549)
Q Consensus 412 ~~~LG~G~fG~V~~~~-~--~~g~~VAVK~i~~~~-~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~--~~~~yLVmE~~~G 485 (549)
+++||+|+||.||++. . .+++.||+|.+.... .....+|+..+.+ ++||||+++++++.. ....|++|||+.+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRE-LKHPNVISLQKVFLSHADRKVWLLFDYAEH 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHh-cCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence 4689999999988853 2 356889999876432 2346789966655 499999999998853 4568999999999
Q ss_pred chhhhhhhcccC---CcccccCchhhhHHhhhe---eecccceeEEEeecc----cc----ccCCCCchhhhhhhh
Q 042769 486 SLDDLIQTYSDS---SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LW----KADGHPSPLLLSLMR 547 (549)
Q Consensus 486 sL~~~L~~~~~~---~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll----~~~G~p~~~l~~Lmr 547 (549)
+|.+++...... .....+++..++.++.|+ |+|||+++|+||||| |+ +.+|..++..+++++
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 85 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 999888653211 112358888999999999 899999999999999 56 345666666665543
No 203
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.48 E-value=1.3e-14 Score=148.46 Aligned_cols=137 Identities=23% Similarity=0.218 Sum_probs=108.4
Q ss_pred eeecccccccCCceEEEe-eee--cCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc--ceEE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIY--EGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDK--DFVY 477 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~--~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~--~~~y 477 (549)
|.+.+.||+|+||.||.. ... +++.||+|.+... ......+|+..+.. ++||||+++++++... ...|
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRE-LKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHh-cCCCCccceEEEEeCCCCceEE
Confidence 778889999999998884 445 6899999988762 12355678865544 5999999999999988 7899
Q ss_pred EEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----cccc----CCCCchhhhhhh
Q 042769 478 LSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKA----DGHPSPLLLSLM 546 (549)
Q Consensus 478 LVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~----~G~p~~~l~~Lm 546 (549)
+||||++++|.+++..+... ....+++..++.++.|+ |.|||+++|+||||| |++. +|..++..+.+.
T Consensus 81 lv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAEHDLWQIIKFHRQA-KRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCCcCHHHHHHhhccC-CCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 99999998888887653311 12368889999999999 889999999999999 7888 676666666554
Q ss_pred h
Q 042769 547 R 547 (549)
Q Consensus 547 r 547 (549)
+
T Consensus 160 ~ 160 (316)
T cd07842 160 R 160 (316)
T ss_pred c
Confidence 3
No 204
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.48 E-value=4.9e-14 Score=155.18 Aligned_cols=139 Identities=15% Similarity=0.102 Sum_probs=101.5
Q ss_pred eeeeecccccccCCceEEEeee--ecCchh------------------HHHHHHHH--HhhhhHHHHHHHHhcCCCCCee
Q 042769 407 KLFVSNTEIAKGSNGTVVYEGI--YEGRPV------------------AVKRLVRA--LHDVAFKEIQNLIASDQHPNIV 464 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~~~--~~g~~V------------------AVK~i~~~--~~~~~~~Ei~~L~~~l~HpNIV 464 (549)
+.|++.++||+|+||+||++.. ..+... +.|.+... ....+.+|+..|..+ +|||||
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l-~HpnIv 226 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRL-NHENIL 226 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhC-CCCCcC
Confidence 3499999999999999987421 111111 22222211 223466888666554 999999
Q ss_pred EEeeeccCcceEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCC
Q 042769 465 RWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGH 537 (549)
Q Consensus 465 rl~g~~~~~~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~ 537 (549)
++++++...+..|+++|++.++|.+++..... ..........++.++.|+ |+|||+++||||||| |++.+|.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~-~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYDFDLYSFMYDEAF-DWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK 305 (501)
T ss_pred cEeEEEEECCeeEEEEeccccCHHHHHhhccc-cccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence 99999999999999999999999888765221 011223355677888888 899999999999999 8899999
Q ss_pred Cchhhhhhhh
Q 042769 538 PSPLLLSLMR 547 (549)
Q Consensus 538 p~~~l~~Lmr 547 (549)
.++..+++.+
T Consensus 306 vkL~DFGla~ 315 (501)
T PHA03210 306 IVLGDFGTAM 315 (501)
T ss_pred EEEEeCCCce
Confidence 8888877765
No 205
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.48 E-value=1.2e-14 Score=144.73 Aligned_cols=134 Identities=20% Similarity=0.182 Sum_probs=106.6
Q ss_pred eeeeecccccccCCceEEEeeeecCchhHHHHHHHHH--hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc
Q 042769 407 KLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL--HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT 484 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~--~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~ 484 (549)
+.|++.++||+|+||.||++...+++.||+|.+.... ...+.+|+..+.+ ++||||+++++++. .+..+++|||+.
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQ-LQHPRLVRLYAVVT-QEPIYIITEYME 83 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHh-cCCcCeeeEEEEEc-cCCcEEEEEcCC
Confidence 4488899999999999888766678899999877532 2356778865544 49999999999874 457899999997
Q ss_pred -cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 485 -CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 485 -GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|+|.+++.... ...+++..+..++.|+ |+|||+.+++||||| +++.++......+.+.
T Consensus 84 ~~~L~~~~~~~~----~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 149 (260)
T cd05067 84 NGSLVDFLKTPE----GIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLA 149 (260)
T ss_pred CCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcce
Confidence 69999987622 3467888888888888 899999999999999 7888877666655543
No 206
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.48 E-value=1.1e-14 Score=144.83 Aligned_cols=132 Identities=21% Similarity=0.151 Sum_probs=107.8
Q ss_pred eeecccccccCCceEEEeeeecCchhHHHHHHHHH---hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL---HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~---~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
|++.+.||.|+||.||......++.+|+|.+.... ...+.+|+..+..+ +||||+++++++......+++|||++
T Consensus 8 y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (261)
T cd05148 8 FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRL-RHKHLISLFAVCSVGEPVYIITELMEK 86 (261)
T ss_pred HHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcC-CCcchhheeeeEecCCCeEEEEeeccc
Confidence 88899999999999887544448899999887542 34566788665554 99999999999999999999999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
|+|.++++... ...+++..+..++.|+ |+|||+++++||||| |++.++..+...+.+
T Consensus 87 ~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~ 150 (261)
T cd05148 87 GSLLAFLRSPE----GQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGL 150 (261)
T ss_pred CCHHHHHhcCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccc
Confidence 59999997632 3457888899999988 889999999999999 778887766655443
No 207
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.48 E-value=1.1e-14 Score=151.35 Aligned_cols=135 Identities=24% Similarity=0.282 Sum_probs=108.9
Q ss_pred ceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc-----c
Q 042769 405 VGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDK-----D 474 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~-----~ 474 (549)
+++.|++.+.||+|+||.||. .+..+|+.||+|.+... ......+|+..+..+ +||||+++++++... .
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRF-KHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhC-CCCCcCchhheeecccccccc
Confidence 455699999999999999887 46778999999987532 233456788655554 899999999876543 3
Q ss_pred eEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 475 FVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 475 ~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
..|+++||+.++|.+++.. ..+++..+..++.|+ |+|||+++|+||||| |++.+|...+..+.+.+
T Consensus 82 ~~~lv~e~~~~~l~~~~~~-------~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 82 DVYIVQELMETDLYKLIKT-------QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred eEEEEehhcccCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECccccee
Confidence 5899999999999888754 458899999999998 889999999999999 78888888777666554
No 208
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.48 E-value=2.1e-14 Score=143.40 Aligned_cols=138 Identities=17% Similarity=0.146 Sum_probs=105.1
Q ss_pred eeecccccccCCceEEEeee-e---cCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcce----
Q 042769 409 FVSNTEIAKGSNGTVVYEGI-Y---EGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDF---- 475 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~-~---~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~---- 475 (549)
|.+.+.||+|+||.||.... . ++..||+|++... ....+.+|+..+.. ++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKD-FDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHh-CCCCCeeeEEeeeccCCccccC
Confidence 45678999999999877432 2 3478999987642 22356678865554 599999999998765443
Q ss_pred --EEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 476 --VYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 476 --~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
.+++|||++ |+|..++...........+++..+..++.|+ |.|||+++++||||| |+++++.+++..+.+
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence 799999997 6999998664322233468888899999998 899999999999999 788888877776665
Q ss_pred hh
Q 042769 546 MR 547 (549)
Q Consensus 546 mr 547 (549)
.+
T Consensus 160 ~~ 161 (273)
T cd05035 160 SK 161 (273)
T ss_pred ee
Confidence 43
No 209
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.48 E-value=2.2e-14 Score=144.73 Aligned_cols=139 Identities=26% Similarity=0.332 Sum_probs=107.5
Q ss_pred eeeeeecccccccCCceEEE-eeeecCchhHHHHHHHH--HhhhhHHHHHHHHhcCCCCCeeEEeeecc-----CcceEE
Q 042769 406 GKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA--LHDVAFKEIQNLIASDQHPNIVRWYGVEN-----DKDFVY 477 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~-----~~~~~y 477 (549)
.+.|++.+.||+|+||.||+ ....+++.+|+|.+... ....+.+|+..+.++.+||||+++++++. .....+
T Consensus 17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~ 96 (286)
T cd06638 17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLW 96 (286)
T ss_pred ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEE
Confidence 34499999999999999887 46677899999977642 12345678866666657999999999873 445789
Q ss_pred EEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 478 LSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
++|||++ |+|.+++.... .....+++..+..++.|+ |.|||+++++||||| +++.+|.+.+..+.+.
T Consensus 97 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~ 171 (286)
T cd06638 97 LVLELCNGGSVTDLVKGFL--KRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS 171 (286)
T ss_pred EEEeecCCCCHHHHHHHhh--ccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCce
Confidence 9999997 59999876422 113457888888899888 889999999999999 7888887766655543
No 210
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.48 E-value=2.6e-14 Score=148.42 Aligned_cols=142 Identities=20% Similarity=0.194 Sum_probs=108.3
Q ss_pred eeeeeecccccccCCceEEEe-eee-------cCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc
Q 042769 406 GKLFVSNTEIAKGSNGTVVYE-GIY-------EGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDK 473 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~~-~~~-------~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~ 473 (549)
...|.+.+.||+|+||.||.+ ... .+..||+|.+... ....+.+|+..+.++.+||||+++++++...
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 345899999999999998874 221 1236888876632 2345678887666665899999999999999
Q ss_pred ceEEEEecccc-cchhhhhhhcccCC----------cccccCchhhhHHhhhe---eecccceeEEEeecc----ccccC
Q 042769 474 DFVYLSLERCT-CSLDDLIQTYSDSS----------CNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKAD 535 (549)
Q Consensus 474 ~~~yLVmE~~~-GsL~~~L~~~~~~~----------~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~ 535 (549)
+..+++|||++ |+|.+++....... ....++...+..++.|+ |.|||+++++||||| |++.+
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~ 170 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTED 170 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCC
Confidence 99999999997 69999997632110 12246667777888888 889999999999999 78888
Q ss_pred CCCchhhhhhhh
Q 042769 536 GHPSPLLLSLMR 547 (549)
Q Consensus 536 G~p~~~l~~Lmr 547 (549)
+..++..+.+.|
T Consensus 171 ~~~kL~Dfg~~~ 182 (334)
T cd05100 171 NVMKIADFGLAR 182 (334)
T ss_pred CcEEECCcccce
Confidence 887777766655
No 211
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.47 E-value=2.3e-14 Score=142.56 Aligned_cols=136 Identities=21% Similarity=0.291 Sum_probs=109.6
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
.|++.+.||+|+||.||+. ...+|+.||+|.++.. ......+|+..+.+. +|+||+++++++...+..+++|
T Consensus 3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCeeeeeeeeecCCeEEEEE
Confidence 3889999999999998874 5558999999976531 234567888666555 9999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
||++ |+|.+++.... .....+++..+..++.|+ |.|||+.+++||||| +++.+|......+.+.
T Consensus 82 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~ 153 (267)
T cd08224 82 ELADAGDLSRMIKHFK--KQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLG 153 (267)
T ss_pred ecCCCCCHHHHHHHhc--ccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEecccee
Confidence 9998 59999987532 123457888899999988 889999999999999 7888887776665543
No 212
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.47 E-value=1.8e-14 Score=144.59 Aligned_cols=137 Identities=21% Similarity=0.243 Sum_probs=107.3
Q ss_pred eeecccccccCCceEEEee-e-----ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEE
Q 042769 409 FVSNTEIAKGSNGTVVYEG-I-----YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYL 478 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~-~-----~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yL 478 (549)
|+..+.||+|+||.||.+. . ...+.+|+|.+... ..+.+.+|++.+.++ +||||+++++++......|+
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l 85 (275)
T cd05046 7 LQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL-SHKNVVRLLGLCREAEPHYM 85 (275)
T ss_pred ceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhc-CCcceeeeEEEECCCCcceE
Confidence 8888999999999988742 2 23467888877642 234567888766555 99999999999999999999
Q ss_pred Eecccc-cchhhhhhhcccC---CcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 479 SLERCT-CSLDDLIQTYSDS---SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 479 VmE~~~-GsL~~~L~~~~~~---~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+|||++ |+|.+++...... .....+++..+..++.|+ |+|||+++|+||||| |++.+|.+....+.+.
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~ 164 (275)
T cd05046 86 ILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLS 164 (275)
T ss_pred EEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccc
Confidence 999998 6999999763210 001258899999999999 899999999999999 7888888776665543
No 213
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.47 E-value=2.9e-14 Score=142.71 Aligned_cols=131 Identities=21% Similarity=0.159 Sum_probs=104.2
Q ss_pred eeecccccccCCceEEEe-eeecC---chhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEG---RPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g---~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
|++.+.||+|+||.||++ ...++ ..||||.+... ....+..|+..+.. ++||||+++++++......+++|
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ-FDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHh-CCCcCcceEEEEECCCCceEEEE
Confidence 788899999999998874 33333 35999987642 23356678865554 59999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
||++ |+|.+++... .+.+++..++.++.|+ |.|||+++++||||| |++.++.++...+.+
T Consensus 85 e~~~~~~L~~~l~~~-----~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~ 152 (269)
T cd05065 85 EFMENGALDSFLRQN-----DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGL 152 (269)
T ss_pred ecCCCCcHHHHHhhC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCcc
Confidence 9997 5999998762 2457888899999988 899999999999999 777777766655443
No 214
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.47 E-value=1.5e-14 Score=148.32 Aligned_cols=137 Identities=20% Similarity=0.163 Sum_probs=108.4
Q ss_pred eeeeecccccccCCceEEEee------eecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceE
Q 042769 407 KLFVSNTEIAKGSNGTVVYEG------IYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFV 476 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~~------~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~ 476 (549)
+.|.+.+.||+|+||.||... ..++..||+|++... ..+.+.+|+..+.++.+||||+++++++...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 449999999999999987742 223567999977643 2335678887766665899999999999999999
Q ss_pred EEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 477 YLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 477 yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|++|||+. |+|.++++... ...+++..+..++.|+ |+|||+++|+||||| |++.++......+.+.+
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKR----ESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccc
Confidence 99999997 69999997622 2337888999999998 889999999999999 77777776666655543
No 215
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.47 E-value=1.6e-14 Score=144.42 Aligned_cols=132 Identities=22% Similarity=0.187 Sum_probs=106.1
Q ss_pred eeecccccccCCceEEEeee-e---cCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 409 FVSNTEIAKGSNGTVVYEGI-Y---EGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~-~---~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
|++.+.||+|+||.||+... . +...||||.+... ....+.+|+..+.. ++||||+++++++...+..+++|
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~iv~ 84 (266)
T cd05033 6 VTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQ-FDHPNIIRLEGVVTKSRPVMIIT 84 (266)
T ss_pred ceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHh-CCCCCcceEeEEEecCCceEEEE
Confidence 88889999999999887422 2 2457899977642 22345678866544 49999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
||++ |+|.+++... ...+++..+..++.|+ |+|||+++|+||||| |++.++.+....+.+.
T Consensus 85 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~ 153 (266)
T cd05033 85 EYMENGSLDKFLREN-----DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLS 153 (266)
T ss_pred EcCCCCCHHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchh
Confidence 9997 5999999762 2468888999999998 889999999999999 7888888777766654
No 216
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.47 E-value=1.1e-14 Score=146.18 Aligned_cols=138 Identities=24% Similarity=0.235 Sum_probs=110.3
Q ss_pred eeecccccccCCceEEEeee------ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEE
Q 042769 409 FVSNTEIAKGSNGTVVYEGI------YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYL 478 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~------~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yL 478 (549)
|.+.+.||+|+||.||++.. .+++.||+|.+... ..+.+.+|++.+.. ++||||+++++++......++
T Consensus 7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~l 85 (280)
T cd05049 7 IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTN-FQHENIVKFYGVCTEGDPPIM 85 (280)
T ss_pred hhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHh-cCCCCchheeeEEecCCCeEE
Confidence 88889999999999887422 33578999987643 23456788866555 599999999999999999999
Q ss_pred Eecccc-cchhhhhhhccc--------CCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhh
Q 042769 479 SLERCT-CSLDDLIQTYSD--------SSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLL 542 (549)
Q Consensus 479 VmE~~~-GsL~~~L~~~~~--------~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l 542 (549)
+|||++ |+|.++++.... ......+++..+..++.|+ |+|||+++++||||| |++.+|.+++..
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d 165 (280)
T cd05049 86 VFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGD 165 (280)
T ss_pred EEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECC
Confidence 999997 599999986431 1223457888888999998 889999999999999 888888888777
Q ss_pred hhhhh
Q 042769 543 LSLMR 547 (549)
Q Consensus 543 ~~Lmr 547 (549)
+.+.+
T Consensus 166 ~g~~~ 170 (280)
T cd05049 166 FGMSR 170 (280)
T ss_pred cccce
Confidence 76654
No 217
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.47 E-value=2.1e-14 Score=150.47 Aligned_cols=135 Identities=27% Similarity=0.328 Sum_probs=109.0
Q ss_pred cceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc----
Q 042769 404 NVGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDK---- 473 (549)
Q Consensus 404 ~igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~---- 473 (549)
.+.+.|+..+.||+|+||.||.+ +..+|+.||+|++.+. ....+.+|+..+. .++||||+++++++...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~-~l~h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMK-LVNHKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHH-hcCCCCCcceeeeeccCCCcc
Confidence 34556999999999999998884 6678999999987632 2335567886554 45999999999987644
Q ss_pred --ceEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhh
Q 042769 474 --DFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 474 --~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
...|+|||||.++|.+.+.. .+++..+..++.|+ |+|||+++|+||||| |++.+|......++
T Consensus 92 ~~~~~~lv~e~~~~~l~~~~~~--------~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 92 EFQDVYLVMELMDANLCQVIQM--------DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred ccCcEEEEEeccCCCHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCc
Confidence 35799999999999988865 27888888899998 889999999999999 88899988777766
Q ss_pred hhh
Q 042769 545 LMR 547 (549)
Q Consensus 545 Lmr 547 (549)
+.+
T Consensus 164 ~~~ 166 (353)
T cd07850 164 LAR 166 (353)
T ss_pred cce
Confidence 554
No 218
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.47 E-value=1.9e-14 Score=146.74 Aligned_cols=140 Identities=21% Similarity=0.237 Sum_probs=108.6
Q ss_pred eeeecccccccCCceEEEe-eeecCc--hhHHHHHHH----HHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGR--PVAVKRLVR----ALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~--~VAVK~i~~----~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
.|++.+.||+|+||.||.. ...++. .+|+|.++. ...+.+.+|+..+.++.+||||+++++++...+..|++|
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 82 (297)
T cd05089 3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAI 82 (297)
T ss_pred cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEE
Confidence 3888899999999998774 333443 457776653 123456788877767668999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCC----------cccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhh
Q 042769 481 ERCT-CSLDDLIQTYSDSS----------CNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLL 542 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~----------~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l 542 (549)
||++ |+|.+++....... ....+++..++.++.|+ |+|||+++|+||||| |++.++.+++..
T Consensus 83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~d 162 (297)
T cd05089 83 EYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIAD 162 (297)
T ss_pred EecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECC
Confidence 9997 69999997632111 12357888889999998 899999999999999 788888887777
Q ss_pred hhhhh
Q 042769 543 LSLMR 547 (549)
Q Consensus 543 ~~Lmr 547 (549)
+++.+
T Consensus 163 fg~~~ 167 (297)
T cd05089 163 FGLSR 167 (297)
T ss_pred cCCCc
Confidence 76653
No 219
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.47 E-value=1.1e-14 Score=149.44 Aligned_cols=139 Identities=22% Similarity=0.207 Sum_probs=114.3
Q ss_pred CCccceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCc
Q 042769 401 QGRNVGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDK 473 (549)
Q Consensus 401 ~~~~igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~ 473 (549)
+.....+ |....+||+|+||+|.++ .+.+.+.+|||++++.. .+....|-+.|.-.-+-|.+++|+.+|+.-
T Consensus 344 d~i~~tD-FnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm 422 (683)
T KOG0696|consen 344 DRIKATD-FNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM 422 (683)
T ss_pred cceeecc-cceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh
Confidence 3445555 999999999999998884 56678999999999751 222334554443333678999999999999
Q ss_pred ceEEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 474 DFVYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 474 ~~~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
+.+|+||||++ |+|.-.|+. .+.+.+..+..++.+| |=+||+++||.|||| |+|.+||.++..+++
T Consensus 423 DRLyFVMEyvnGGDLMyhiQQ------~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGm 496 (683)
T KOG0696|consen 423 DRLYFVMEYVNGGDLMYHIQQ------VGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGM 496 (683)
T ss_pred hheeeEEEEecCchhhhHHHH------hcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccc
Confidence 99999999998 599998988 6779999999999998 779999999999999 799999999988776
Q ss_pred h
Q 042769 546 M 546 (549)
Q Consensus 546 m 546 (549)
-
T Consensus 497 c 497 (683)
T KOG0696|consen 497 C 497 (683)
T ss_pred c
Confidence 4
No 220
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.47 E-value=1.4e-14 Score=145.82 Aligned_cols=132 Identities=25% Similarity=0.249 Sum_probs=108.1
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
.|++.+.||+|+||.||.. ...+++.+|+|.+... ..+.+.+|+..+.++ +||||+++++.+......|+||||+
T Consensus 6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSEC-KHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEEEeecc
Confidence 3888999999999998874 4557889999976532 234566788665554 8999999999999999999999999
Q ss_pred cc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 484 TC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 484 ~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
+| +|.+++... ...+++..++.++.|+ |.|||+++|+||||| +++.+|......+.+
T Consensus 85 ~~~~L~~~~~~~-----~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~ 149 (280)
T cd06611 85 DGGALDSIMLEL-----ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGV 149 (280)
T ss_pred CCCcHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCcc
Confidence 85 999988762 2468999999999999 889999999999999 778888777665544
No 221
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.47 E-value=1.4e-14 Score=140.60 Aligned_cols=139 Identities=22% Similarity=0.221 Sum_probs=114.9
Q ss_pred eeeeeecccccccCCceEEE-eeeecCchhHHHHHHH---HHhhhhHHHHHHHHhcCCCCCeeEEeeeccCc-----ceE
Q 042769 406 GKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVR---ALHDVAFKEIQNLIASDQHPNIVRWYGVENDK-----DFV 476 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~---~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~-----~~~ 476 (549)
+++|.+.+.||+|+|+.|++ ++..+++.+|+|++.- +..+.+.+|+... ++++||||++++++...+ .+.
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~-rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNH-RKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHH-HhhCCcchHHHHHHHHHhhccCceeE
Confidence 46699999999999999988 6899999999998874 3455678999665 455999999999987543 359
Q ss_pred EEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eeccccee--EEEeecc----ccccCCCCchhhhhhh
Q 042769 477 YLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVK--VIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 477 yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~--IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
||+++|.. |+|.+.++..+. +...+++.+++.++.++ |++||+.. ++||||| |+...|.|...+++=|
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~--kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKI--KGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEeehhccccHHHHHHHHhh--cCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCc
Confidence 99999986 999999988653 34479999999999999 99999988 9999999 6666788877776655
Q ss_pred h
Q 042769 547 R 547 (549)
Q Consensus 547 r 547 (549)
+
T Consensus 177 ~ 177 (302)
T KOG2345|consen 177 T 177 (302)
T ss_pred c
Confidence 4
No 222
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.47 E-value=2.5e-14 Score=142.68 Aligned_cols=131 Identities=25% Similarity=0.294 Sum_probs=105.9
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH------------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcce
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDF 475 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~ 475 (549)
|.+...||+|+||.||.. +..+++.+|+|.+... ..+.+.+|+..+.. ++||||+++++++...+.
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKE-LQHENIVQYLGSSLDADH 80 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHh-cCCCCeeeEEEEEEeCCc
Confidence 667789999999998874 5567889999966421 12345677755544 499999999999999999
Q ss_pred EEEEeccccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 476 VYLSLERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 476 ~yLVmE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
.+++|||++| +|.+++.. ...+++..+..++.|+ |+|||+++++||||+ |++.++.+....+++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~------~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNN------YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred cEEEEEecCCCCHHHHHHh------ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCC
Confidence 9999999975 99999977 4568888889999998 899999999999999 7788887776665544
No 223
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=99.47 E-value=7.3e-14 Score=153.26 Aligned_cols=142 Identities=12% Similarity=0.171 Sum_probs=100.4
Q ss_pred CceeccCCCc------cccccccceeeeeccccccccccceeeecC---------Ccchhhhccc-cccccCCcchhh--
Q 042769 1 VSWTFGTGTP------IYSSYQAPVQATVDQDNASELTNSFFIDCG---------EDWGLYAHGL-LGRMKLPQSIDD-- 62 (549)
Q Consensus 1 ~~W~f~tg~~------i~ss~~~~~~~~~~~~~~~~~~~~~~~~~~---------~d~~ly~~~~-~g~~~~~~~~~~-- 62 (549)
++|+|.++++ |.|+ |.+..+.+|.++ .+|.||++|+ +|+++|.|.+..
T Consensus 132 ~~W~~~~~~~~~~~~~i~ss--------------P~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~ 197 (488)
T cd00216 132 QVWKFGNNDQVPPGYTMTGA--------------PTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPD 197 (488)
T ss_pred EeeeecCCCCcCcceEecCC--------------CEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCC
Confidence 4799999887 5566 777777777765 3688999999 999999998741
Q ss_pred -------------------hhhcCCCcc-cccceeecceee------------------EEEEEEccccceeeecCCCCC
Q 042769 63 -------------------YVKTAPHIT-EEGAVTLGSKTT------------------TVFVLEAKTGRLIRTYGSPHS 104 (549)
Q Consensus 63 -------------------~v~~sP~~~-~dg~v~~Gsk~~------------------~~~~vda~tG~~~~~~~~~~~ 104 (549)
.|.++|++. .+|.||+|+-++ ++||||++||+++|+++....
T Consensus 198 ~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~ 277 (488)
T cd00216 198 PNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPH 277 (488)
T ss_pred cCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCC
Confidence 244678875 478999998554 899999999999999986421
Q ss_pred Cccccc-hhhhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCceeeeeee
Q 042769 105 SSTLQN-EEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVSWSMTVA 173 (549)
Q Consensus 105 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~Wn~~~~ 173 (549)
..+. +....+.+.+ -...+-.. ..+||++..++.|+|||++||+++|...+.
T Consensus 278 --~~~~~~~~s~p~~~~----------~~~~~g~~-----~~~V~~g~~~G~l~ald~~tG~~~W~~~~~ 330 (488)
T cd00216 278 --DLWDYDGPNQPSLAD----------IKPKDGKP-----VPAIVHAPKNGFFYVLDRTTGKLISARPEV 330 (488)
T ss_pred --CCcccccCCCCeEEe----------ccccCCCe-----eEEEEEECCCceEEEEECCCCcEeeEeEee
Confidence 0111 0111110000 00001000 147999999999999999999999999876
No 224
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.47 E-value=1.8e-14 Score=142.39 Aligned_cols=133 Identities=25% Similarity=0.249 Sum_probs=108.3
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|.+.+.||+|+||.||.. ...+++.||+|.+... ....+.+|+..+.. ++||||+++++++...+..|++|||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAK-LDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHh-cCCCCeehheeeeccCCEEEEEEEe
Confidence 777889999999998874 5567899999976532 33456678866555 5999999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
++ ++|.+++.... ...+++..+..++.|+ |.|||+++++||||| +++.++.+.+..+.+.
T Consensus 81 ~~~~~L~~~l~~~~----~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 81 AENGDLHKLLKMQR----GRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred CCCCcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccc
Confidence 97 59999998732 3468888888898888 889999999999999 7888888777666543
No 225
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.47 E-value=9.8e-15 Score=151.64 Aligned_cols=135 Identities=21% Similarity=0.295 Sum_probs=109.4
Q ss_pred ceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccC----cc
Q 042769 405 VGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVEND----KD 474 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~----~~ 474 (549)
+++.|++.+.||+|+||.||.. ...+|+.||+|++.... ...+.+|+..|.. ++||||+++++++.. ..
T Consensus 3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~ 81 (334)
T cd07855 3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRH-FKHDNIIAIRDILRPPGADFK 81 (334)
T ss_pred hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHh-cCCCCccCHHHhccccCCCCc
Confidence 3455999999999999998874 66779999999877531 2345678865544 489999999998763 34
Q ss_pred eEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 475 FVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 475 ~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
..|+||||+.|+|.+++.. ...+++..+..++.|+ |.|||+++|+||||| |++.+|..++..+.+.
T Consensus 82 ~~~lv~e~~~~~l~~~~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~ 154 (334)
T cd07855 82 DVYVVMDLMESDLHHIIHS------DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMA 154 (334)
T ss_pred eEEEEEehhhhhHHHHhcc------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccc
Confidence 6899999999999999876 4558999999999999 889999999999999 8889988877766543
No 226
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.47 E-value=1.9e-14 Score=147.39 Aligned_cols=135 Identities=24% Similarity=0.301 Sum_probs=109.5
Q ss_pred eeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEE
Q 042769 406 GKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYL 478 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yL 478 (549)
.+.|...+.||+|+||.||.. ...+++.||+|.+... ....+.+|+..+..+ +||||+++++++...+..|+
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~l 92 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-RHPNTIEYKGCYLREHTAWL 92 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEEeCCeEEE
Confidence 345888999999999998874 5567899999976532 233566888665554 99999999999999999999
Q ss_pred EecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 479 SLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 479 VmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
||||+.|+|.+++... ...+++..+..++.|+ |.|||+++++||||+ +++.+|.+++..+.++
T Consensus 93 v~e~~~g~l~~~~~~~-----~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~ 162 (307)
T cd06607 93 VMEYCLGSASDILEVH-----KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSA 162 (307)
T ss_pred EHHhhCCCHHHHHHHc-----ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcc
Confidence 9999999988887652 2458889999999998 889999999999999 7888887776655543
No 227
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.47 E-value=2.5e-14 Score=146.42 Aligned_cols=130 Identities=20% Similarity=0.208 Sum_probs=106.2
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|++.+.||+|+||.||+ .+..+++.||+|.+.... ...+.+|+..+. .++||||+++++.+..++..|++||
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~-~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 3 FETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILT-FAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred ceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHH-hCCCCCeeeeEEEEecCCEEEEEEe
Confidence 88889999999999887 466778999999776432 224557775554 4599999999999999999999999
Q ss_pred cccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 482 RCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 482 ~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
|+.| +|.+++.. .+.+++..+..++.|+ |.|||+++++||||| |++.+|......+.+
T Consensus 82 ~~~g~~L~~~l~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~ 147 (305)
T cd05609 82 YVEGGDCATLLKN------IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGL 147 (305)
T ss_pred cCCCCcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCC
Confidence 9985 99999976 4568888888888888 889999999999999 788887766655443
No 228
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.47 E-value=3.1e-14 Score=144.35 Aligned_cols=140 Identities=22% Similarity=0.230 Sum_probs=109.6
Q ss_pred eeeecccccccCCceEEEee-e-----ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEE
Q 042769 408 LFVSNTEIAKGSNGTVVYEG-I-----YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVY 477 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~~-~-----~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~y 477 (549)
.|++.+.||+|+||.||... . .....+|+|.+... ....+.+|+..+..+.+|+||+++++++...+..+
T Consensus 13 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 92 (293)
T cd05053 13 RLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLY 92 (293)
T ss_pred HeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeE
Confidence 38889999999999988742 2 22367899977642 22346678866655548999999999999999999
Q ss_pred EEecccc-cchhhhhhhcccC----------CcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCc
Q 042769 478 LSLERCT-CSLDDLIQTYSDS----------SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPS 539 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~----------~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~ 539 (549)
++|||+. |+|.++++..... .....+++..+..++.|+ |.|||+++|+||||| |++.+|.++
T Consensus 93 li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~k 172 (293)
T cd05053 93 VVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMK 172 (293)
T ss_pred EEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEE
Confidence 9999997 6999999753210 123468888889999998 899999999999999 788888887
Q ss_pred hhhhhhhh
Q 042769 540 PLLLSLMR 547 (549)
Q Consensus 540 ~~l~~Lmr 547 (549)
...+++.+
T Consensus 173 L~Dfg~~~ 180 (293)
T cd05053 173 IADFGLAR 180 (293)
T ss_pred eCcccccc
Confidence 77776654
No 229
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.47 E-value=1.8e-14 Score=143.15 Aligned_cols=134 Identities=21% Similarity=0.189 Sum_probs=108.5
Q ss_pred eeeeecccccccCCceEEEeeeecCchhHHHHHHHH--HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc
Q 042769 407 KLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRA--LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT 484 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~ 484 (549)
+.|.+.+.||+|+||.||+....+++.+|||.+... ....+.+|+..+.. ++||||+++++++......+++|||+.
T Consensus 6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKK-LRHDKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhh-CCCCCEeeeeeeeecCCceEEEEeccC
Confidence 448999999999999988755556678999987743 23356788866655 599999999999998889999999997
Q ss_pred -cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 485 -CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 485 -GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
++|.+++.... ...+++..+..++.|+ |.|||+++++||||| +++.+|..+...+.+
T Consensus 85 ~~~L~~~i~~~~----~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~ 149 (261)
T cd05034 85 KGSLLDFLKSGE----GKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGL 149 (261)
T ss_pred CCCHHHHHhccc----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECcccc
Confidence 59999997622 3457888889999888 889999999999999 788888777665543
No 230
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.46 E-value=3.9e-14 Score=141.19 Aligned_cols=120 Identities=14% Similarity=0.132 Sum_probs=94.4
Q ss_pred ccccccCCceEEEe-eee-------cCchhHHHHHHHHH---hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 413 TEIAKGSNGTVVYE-GIY-------EGRPVAVKRLVRAL---HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~-------~g~~VAVK~i~~~~---~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
+.||+|+||.||+. ... ....+|+|.+.... .+.+..|+. +++.++||||+++++++......++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~-~l~~~~h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAAS-MMSQLSHKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHH-HHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence 46999999998874 222 24569999887542 234455664 4455699999999999999899999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCC
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHP 538 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p 538 (549)
||+ |+|.++++.. ...+++..+..++.|+ |.|||+++|+||||| |++.++..
T Consensus 80 ~~~~g~L~~~l~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~ 139 (258)
T cd05078 80 YVKFGSLDTYLKKN-----KNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDR 139 (258)
T ss_pred cCCCCcHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEeccccc
Confidence 998 5999999762 2357888888999999 899999999999999 77776654
No 231
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.46 E-value=2e-14 Score=146.33 Aligned_cols=138 Identities=18% Similarity=0.134 Sum_probs=106.3
Q ss_pred eeeecccccccCCceEEEeee-----------------ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEE
Q 042769 408 LFVSNTEIAKGSNGTVVYEGI-----------------YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRW 466 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~~~-----------------~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl 466 (549)
.|++.+.||+|+||.||.... .++..+|+|.+... ....+.+|+..+..+ +|+||+++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~ 84 (296)
T cd05095 6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRL-KDPNIIRL 84 (296)
T ss_pred hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcceE
Confidence 488999999999999887311 12346888887643 234567888666555 99999999
Q ss_pred eeeccCcceEEEEecccc-cchhhhhhhcccCC-----cccccCchhhhHHhhhe---eecccceeEEEeecc----ccc
Q 042769 467 YGVENDKDFVYLSLERCT-CSLDDLIQTYSDSS-----CNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWK 533 (549)
Q Consensus 467 ~g~~~~~~~~yLVmE~~~-GsL~~~L~~~~~~~-----~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~ 533 (549)
++++...+..+++|||+. |+|.+++....... ....+++..+..++.|+ |+|||+++++||||| |++
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~ 164 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVG 164 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEc
Confidence 999999999999999997 69999997743211 11346677889999998 899999999999999 778
Q ss_pred cCCCCchhhhhhh
Q 042769 534 ADGHPSPLLLSLM 546 (549)
Q Consensus 534 ~~G~p~~~l~~Lm 546 (549)
.++...+..+++.
T Consensus 165 ~~~~~~l~dfg~~ 177 (296)
T cd05095 165 KNYTIKIADFGMS 177 (296)
T ss_pred CCCCEEeccCccc
Confidence 8887776665554
No 232
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=2.4e-15 Score=146.04 Aligned_cols=133 Identities=23% Similarity=0.327 Sum_probs=112.7
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCc--------c
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDK--------D 474 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~--------~ 474 (549)
|+...+||+|.||.|++ +...+|+.||+|++..+. ...+.+|+..| ..++|+|++.+++.|... .
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL-~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKIL-QLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHH-HHhcchhHHHHHHHHhhccCCcccccc
Confidence 77888999999999888 577889999999777542 23577899665 555999999999988642 3
Q ss_pred eEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 475 FVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 475 ~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
.+||||++|+.+|.-+|.. ....++...+..++.++ |.|+|+..|+|||+| |++.+|--.+.+++|+|
T Consensus 98 t~ylVf~~cehDLaGlLsn-----~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 98 TFYLVFDFCEHDLAGLLSN-----RKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred eeeeeHHHhhhhHHHHhcC-----ccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccccc
Confidence 5899999999999999866 23679999999999998 889999999999999 89999999999999887
No 233
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.46 E-value=2.3e-14 Score=146.27 Aligned_cols=132 Identities=24% Similarity=0.328 Sum_probs=108.1
Q ss_pred eeeeecccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 407 KLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
+.|++.+.||+|+||.||.. ...+++.+|+|.+... ..+...+|+..+.. ++||||+++++.+......|+||||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~-~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHh-CCCCCEeeEEEEEEeCCEEEEeecc
Confidence 45999999999999998774 5677899999977642 23356678865554 5999999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+. ++|.+++.. ..+++..+..++.|+ |.|||+++|+||||| |++.+|.+.+..+.+.
T Consensus 99 ~~~~~L~~~~~~-------~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~ 163 (296)
T cd06654 99 LAGGSLTDVVTE-------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (296)
T ss_pred cCCCCHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccc
Confidence 97 599999865 347788888999988 899999999999999 7888887776666543
No 234
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.46 E-value=2.4e-14 Score=142.76 Aligned_cols=135 Identities=22% Similarity=0.323 Sum_probs=108.8
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|++.+.||+|+||.||.. ...+++.+|||.+... ....+.+|+..+.. ++||||+++++++...+..+++||
T Consensus 4 y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08229 4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ-LNHPNVIKYYASFIEDNELNIVLE 82 (267)
T ss_pred hhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHH-ccCCchhhhhheeEeCCeEEEEEE
Confidence 888899999999998874 5678999999965431 23356678865555 499999999999999999999999
Q ss_pred cccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 482 RCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 482 ~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|++| +|.+++.... .....+++..+..++.|+ |.|||+++++|+||| +++.+|......+++.
T Consensus 83 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~ 153 (267)
T cd08229 83 LADAGDLSRMIKHFK--KQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLG 153 (267)
T ss_pred ecCCCCHHHHHHHhh--ccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhh
Confidence 9984 9999887522 123457888999999998 889999999999999 7888888777766543
No 235
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.46 E-value=2.7e-14 Score=142.08 Aligned_cols=127 Identities=25% Similarity=0.284 Sum_probs=102.5
Q ss_pred ccccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+.||+|+||.||++ ...+++.||+|.+.+.. ......|...+....+||||+++++++...+..|++|||++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 57999999998884 55678999999776431 11234455445566689999999999999999999999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
++|.++++. ...+++.++..++.|+ |.|||+.+++||||+ |++.++.+++..+.+
T Consensus 82 ~~L~~~l~~------~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~ 143 (260)
T cd05611 82 GDCASLIKT------LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGL 143 (260)
T ss_pred CCHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeeccc
Confidence 599999976 4568899999999999 889999999999999 778888776655544
No 236
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.46 E-value=1.6e-14 Score=150.34 Aligned_cols=136 Identities=22% Similarity=0.301 Sum_probs=110.5
Q ss_pred ceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc-----
Q 042769 405 VGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDK----- 473 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~----- 473 (549)
+.+.|.+.+.||+|+||.||. .+..+++.||||.+... ......+|+..+.. ++||||+++++++...
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~ni~~~~~~~~~~~~~~~ 81 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRH-LDHENVIAIKDIMPPPHREAF 81 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHh-cCCCCccchHHheeccccccc
Confidence 344599999999999999887 46678999999987642 22345678866555 4999999999987654
Q ss_pred ceEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 474 DFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 474 ~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
...|++|||+.++|.+++.. ...+++..+..++.|+ |.|||+++++||||| |++.+|..++..+.++
T Consensus 82 ~~~~lv~e~~~~~L~~~~~~------~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 82 NDVYIVYELMDTDLHQIIRS------SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred CcEEEEEeCCCCCHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 34899999999999999876 4568999999999999 889999999999999 7888888877776665
Q ss_pred h
Q 042769 547 R 547 (549)
Q Consensus 547 r 547 (549)
+
T Consensus 156 ~ 156 (337)
T cd07858 156 R 156 (337)
T ss_pred c
Confidence 4
No 237
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.46 E-value=1.7e-14 Score=148.20 Aligned_cols=133 Identities=23% Similarity=0.249 Sum_probs=108.2
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
.|+..+.||+|+||.||.+ ...+++.||+|.+... ....+..|++.+.. ++||||+++++++......|++|
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILAT-LDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHh-CCCCCchhheeeeecCCEEEEEE
Confidence 3888999999999998884 5557899999977643 22345677765544 48999999999999999999999
Q ss_pred ccccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 481 ERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 481 E~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
||+.| +|.+++.... ...+++..+..++.|+ |+|||+.+++||||| +++.+|......+.+
T Consensus 81 e~~~~~~L~~~~~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~ 149 (316)
T cd05574 81 DYCPGGELFRLLQRQP----GKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDL 149 (316)
T ss_pred EecCCCCHHHHHHhCC----CCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecch
Confidence 99975 9999987622 3568889999999998 899999999999999 788888776665554
No 238
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.46 E-value=1.5e-14 Score=146.70 Aligned_cols=132 Identities=26% Similarity=0.319 Sum_probs=107.5
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCc--ceEEEEe
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDK--DFVYLSL 480 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~--~~~yLVm 480 (549)
|+..+.||+|+||.||.+ ...+++.+|+|.++... ...+.+|+..+..+ +||||+++++++... ...|++|
T Consensus 7 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~lv~ 85 (293)
T cd07843 7 YEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKL-QHPNIVTVKEVVVGSNLDKIYMVM 85 (293)
T ss_pred hhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhc-CCCCEEEEEEEEEecCCCcEEEEe
Confidence 888999999999998874 55678899999776431 12345788666555 899999999998877 8899999
Q ss_pred cccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 481 ERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 481 E~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
||+.++|.+++.... ..+++..++.++.|+ |+|||+++++||||| |++.+|.+....+++.
T Consensus 86 e~~~~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~ 153 (293)
T cd07843 86 EYVEHDLKSLMETMK-----QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLA 153 (293)
T ss_pred hhcCcCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCce
Confidence 999999999887622 358999999999999 899999999999999 7888887776665543
No 239
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.46 E-value=3.8e-14 Score=143.77 Aligned_cols=139 Identities=22% Similarity=0.230 Sum_probs=109.4
Q ss_pred eeeecccccccCCceEEEee------eecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEE
Q 042769 408 LFVSNTEIAKGSNGTVVYEG------IYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYL 478 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~~------~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yL 478 (549)
.|.+.+.||+|+||+||+.. ..++..+|+|.+... ....+.+|++.+.++ +||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 6 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCccEE
Confidence 38889999999999988742 123456888887642 234567888766555 99999999999999999999
Q ss_pred Eecccc-cchhhhhhhcccC-------CcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhh
Q 042769 479 SLERCT-CSLDDLIQTYSDS-------SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLL 543 (549)
Q Consensus 479 VmE~~~-GsL~~~L~~~~~~-------~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~ 543 (549)
+|||++ |+|.+++..+... .....+++..+..++.|+ |+|||+++++||||| |++.+|...+..+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~df 164 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDF 164 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccC
Confidence 999997 6999999764311 112358889999999999 889999999999999 7888888777766
Q ss_pred hhhh
Q 042769 544 SLMR 547 (549)
Q Consensus 544 ~Lmr 547 (549)
.+.+
T Consensus 165 g~~~ 168 (288)
T cd05093 165 GMSR 168 (288)
T ss_pred Cccc
Confidence 6544
No 240
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.46 E-value=3.4e-14 Score=146.21 Aligned_cols=140 Identities=21% Similarity=0.212 Sum_probs=108.4
Q ss_pred eeeecccccccCCceEEEe-ee-------ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcce
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GI-------YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDF 475 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~-------~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~ 475 (549)
.|.+.+.||+|+||.||.. +. .....+|+|.+... ....+.+|+..+..+.+||||+++++++...+.
T Consensus 13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (314)
T cd05099 13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGP 92 (314)
T ss_pred HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCc
Confidence 4888999999999998873 21 12456888877642 223466788666666579999999999999999
Q ss_pred EEEEecccc-cchhhhhhhcccC----------CcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCC
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDS----------SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGH 537 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~----------~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~ 537 (549)
.|++|||+. |+|.+++...... .....++...+..++.|+ |.|||+++++||||| |++.+|.
T Consensus 93 ~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~ 172 (314)
T cd05099 93 LYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNV 172 (314)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCc
Confidence 999999997 6999999764311 012347777888888888 889999999999999 7888888
Q ss_pred Cchhhhhhhh
Q 042769 538 PSPLLLSLMR 547 (549)
Q Consensus 538 p~~~l~~Lmr 547 (549)
.++..+.+++
T Consensus 173 ~kL~Dfg~~~ 182 (314)
T cd05099 173 MKIADFGLAR 182 (314)
T ss_pred EEEccccccc
Confidence 7777666654
No 241
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.46 E-value=2.7e-14 Score=149.18 Aligned_cols=135 Identities=23% Similarity=0.292 Sum_probs=109.0
Q ss_pred ceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcc----
Q 042769 405 VGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKD---- 474 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~---- 474 (549)
+.+.|++.+.||+|+||.||+. ...+++.||||++... ....+.+|+..+..+ +||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-KHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCccceeeeecCCccccc
Confidence 4556999999999999998884 5678999999987532 223466788666555 9999999999987553
Q ss_pred --eEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 475 --FVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 475 --~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
..++||||+.++|.+++.. ..+++..++.++.|+ |+|||+.+|+||||| |++.+|.+....+++
T Consensus 92 ~~~~~lv~e~~~~~l~~~~~~-------~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~ 164 (343)
T cd07880 92 FHDFYLVMPFMGTDLGKLMKH-------EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGL 164 (343)
T ss_pred cceEEEEEecCCCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 4689999997799888754 358899999999999 889999999999999 788888877776666
Q ss_pred hh
Q 042769 546 MR 547 (549)
Q Consensus 546 mr 547 (549)
++
T Consensus 165 ~~ 166 (343)
T cd07880 165 AR 166 (343)
T ss_pred cc
Confidence 54
No 242
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.46 E-value=3.5e-14 Score=142.28 Aligned_cols=132 Identities=23% Similarity=0.196 Sum_probs=99.6
Q ss_pred ccccccCCceEEEee---eecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVYEG---IYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~~---~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+.||+|+||.||+.. ..++..+|+|.+... ....+.+|+..+.. ++||||+++++++......++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRS-LQHSNLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHh-CCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence 369999999987742 234567899977642 22346678865554 499999999999999999999999998
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|+|.++++..+. .....+++..+..++.|+ |+|||+++++||||| |++.++.++...+.+.
T Consensus 80 g~L~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~ 147 (269)
T cd05087 80 GDLKGYLRSCRK-AELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLS 147 (269)
T ss_pred CcHHHHHHHhhh-cccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCcccc
Confidence 699999976331 112235566777888888 899999999999999 7777777766665544
No 243
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.46 E-value=4.4e-14 Score=141.33 Aligned_cols=132 Identities=21% Similarity=0.241 Sum_probs=106.5
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH--------HhhhhHHHHHHHHhcCCCCCeeEEeeeccC--cceEE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA--------LHDVAFKEIQNLIASDQHPNIVRWYGVEND--KDFVY 477 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~--------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~--~~~~y 477 (549)
|+..+.||+|+||.||.. ...+++.||+|++... ....+.+|+..+..+ +||||+++++++.. ....+
T Consensus 4 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred ccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-CCCCeeeEEEEEEcCCCCEEE
Confidence 788899999999998874 5677899999976531 123466788665554 99999999998865 35789
Q ss_pred EEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 478 LSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
++|||++ ++|.+++.. ...+++...+.++.|+ |+|||+++|+||||| +++.++.+....+++.+
T Consensus 83 l~~e~~~~~~L~~~l~~------~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 83 IFMEYMPGGSVKDQLKA------YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred EEEeCCCCCcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 9999998 599999976 3457888888999988 899999999999999 88888887777666543
No 244
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.45 E-value=2.7e-14 Score=146.44 Aligned_cols=135 Identities=19% Similarity=0.178 Sum_probs=101.2
Q ss_pred cccccccCCceEEEeee---ecCchhHHHHHHHHH-hhhhHHHHHHHHhcCCCCCeeEEeeecc--CcceEEEEeccccc
Q 042769 412 NTEIAKGSNGTVVYEGI---YEGRPVAVKRLVRAL-HDVAFKEIQNLIASDQHPNIVRWYGVEN--DKDFVYLSLERCTC 485 (549)
Q Consensus 412 ~~~LG~G~fG~V~~~~~---~~g~~VAVK~i~~~~-~~~~~~Ei~~L~~~l~HpNIVrl~g~~~--~~~~~yLVmE~~~G 485 (549)
+.+||+|+||.||++.. .+++.||+|.+.... .....+|+..+.. ++||||+++++++. .+...|++|||+.+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRE-LKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHh-CCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 35899999999888532 356789999876432 2346688866655 59999999999874 45678999999999
Q ss_pred chhhhhhhcccC---CcccccCchhhhHHhhhe---eecccceeEEEeecc----cc----ccCCCCchhhhhhhh
Q 042769 486 SLDDLIQTYSDS---SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LW----KADGHPSPLLLSLMR 547 (549)
Q Consensus 486 sL~~~L~~~~~~---~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll----~~~G~p~~~l~~Lmr 547 (549)
+|.+++...... .....+++..++.++.|+ |.|||+++|+||||| |+ +.+|..++..+++.+
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 998888643211 112357888889999999 899999999999999 55 455666666666553
No 245
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.45 E-value=3.6e-14 Score=141.91 Aligned_cols=137 Identities=18% Similarity=0.181 Sum_probs=101.3
Q ss_pred eecccccccCCceEEEee-eecCc--hhHHHHHHH-----HHhhhhHHHHHHHHhcCCCCCeeEEeeeccCc------ce
Q 042769 410 VSNTEIAKGSNGTVVYEG-IYEGR--PVAVKRLVR-----ALHDVAFKEIQNLIASDQHPNIVRWYGVENDK------DF 475 (549)
Q Consensus 410 ~~~~~LG~G~fG~V~~~~-~~~g~--~VAVK~i~~-----~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~------~~ 475 (549)
.+++.||+|+||.||... ..+++ .+|+|.++. ...+.+.+|+..+..+ +||||+++++++... ..
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEF-DHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEccCCcccCCCC
Confidence 456799999999987743 33343 588887653 2234566788666554 999999999976432 24
Q ss_pred EEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
.+++|||+. |+|.+++...+.......+++..+..++.|+ |+|||+++|+||||| |++.++.+....+++.+
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence 789999997 6999888543221223457888899999998 899999999999999 88888888877766543
No 246
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.45 E-value=1.8e-14 Score=146.80 Aligned_cols=135 Identities=24% Similarity=0.295 Sum_probs=106.7
Q ss_pred ceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcc----
Q 042769 405 VGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKD---- 474 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~---- 474 (549)
+++ |++.+.||+|+||.||.+ ...+++.||||++.... .....+|+..+.+ ++||||+++++++....
T Consensus 11 ~~~-y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 11 VSK-YEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQL-LKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred hhh-eEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHh-CCCCCccceEEEEeccccccc
Confidence 344 999999999999998884 55679999999775421 1234578865544 49999999999876544
Q ss_pred ----eEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhh
Q 042769 475 ----FVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLL 543 (549)
Q Consensus 475 ----~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~ 543 (549)
..++||||+.++|.+++... ...+++..++.++.|+ |+|||+++++||||| |++.+|.+++..+
T Consensus 89 ~~~~~~~lv~e~~~~~l~~~l~~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 89 RYKGSFYLVFEFCEHDLAGLLSNK-----NVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CCCceEEEEEcCCCcCHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcC
Confidence 45999999999998888651 2358899999999999 899999999999999 7888887777665
Q ss_pred hhh
Q 042769 544 SLM 546 (549)
Q Consensus 544 ~Lm 546 (549)
.+.
T Consensus 164 g~~ 166 (310)
T cd07865 164 GLA 166 (310)
T ss_pred CCc
Confidence 544
No 247
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.45 E-value=3.1e-14 Score=143.39 Aligned_cols=138 Identities=22% Similarity=0.183 Sum_probs=107.7
Q ss_pred eeecccccccCCceEEEeee-e-----cCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEE
Q 042769 409 FVSNTEIAKGSNGTVVYEGI-Y-----EGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYL 478 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~-~-----~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yL 478 (549)
|++.+.||+|+||.||.... . ....||+|.+... ....+.+|+..+.. ++||||+++++++......|+
T Consensus 7 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~-l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 7 VRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSD-LQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred cchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHh-cCCcccceEEEEEcCCCceEE
Confidence 88889999999999887432 2 2367999988643 23346678866555 599999999999999999999
Q ss_pred Eecccc-cchhhhhhhcccCCc----------ccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCch
Q 042769 479 SLERCT-CSLDDLIQTYSDSSC----------NSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSP 540 (549)
Q Consensus 479 VmE~~~-GsL~~~L~~~~~~~~----------~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~ 540 (549)
+|||+. |+|.+++........ ...+++..+..++.|+ |.|||+++++||||| |++.++.+.+
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L 165 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKI 165 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEE
Confidence 999997 699999987432111 1457788888999998 889999999999999 7888888777
Q ss_pred hhhhhhh
Q 042769 541 LLLSLMR 547 (549)
Q Consensus 541 ~l~~Lmr 547 (549)
..+.+.+
T Consensus 166 ~dfg~~~ 172 (283)
T cd05048 166 SDFGLSR 172 (283)
T ss_pred CCCccee
Confidence 7666544
No 248
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.45 E-value=3.2e-14 Score=143.63 Aligned_cols=117 Identities=13% Similarity=0.071 Sum_probs=90.6
Q ss_pred cccccCCceEEEeee-e------------------------cCchhHHHHHHHHHh---hhhHHHHHHHHhcCCCCCeeE
Q 042769 414 EIAKGSNGTVVYEGI-Y------------------------EGRPVAVKRLVRALH---DVAFKEIQNLIASDQHPNIVR 465 (549)
Q Consensus 414 ~LG~G~fG~V~~~~~-~------------------------~g~~VAVK~i~~~~~---~~~~~Ei~~L~~~l~HpNIVr 465 (549)
.||+|+||.||.... . ....||+|.+..... ..+.+|+ .+++.++||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~-~~~~~l~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETA-SLMSQVSHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHH-HHHhcCCCCCeee
Confidence 699999999886321 1 113578887765422 2344555 3456669999999
Q ss_pred EeeeccCcceEEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCC
Q 042769 466 WYGVENDKDFVYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADG 536 (549)
Q Consensus 466 l~g~~~~~~~~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G 536 (549)
+++++......++|||||+ |+|..++.. ..+.+++.++..++.|+ |+|||+++|+||||| |++.+|
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-----~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRK-----EKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLG 154 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccC
Confidence 9999999999999999998 589888865 23468889999999999 899999999999999 666544
No 249
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.45 E-value=3.2e-14 Score=142.68 Aligned_cols=139 Identities=17% Similarity=0.089 Sum_probs=107.1
Q ss_pred eeeecccccccCCceEEEe-ee-----ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEE
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GI-----YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVY 477 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~-----~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~y 477 (549)
.|.+.+.||+|+||.||.. .. .++..||+|.+... ....+.+|+..+.. ++||||+++++++......|
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKE-FNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHh-CCCCceeEEEEEEcCCCCcE
Confidence 3888899999999998763 22 23478999987632 12345678866555 59999999999999999999
Q ss_pred EEecccc-cchhhhhhhcccCC----cccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 478 LSLERCT-CSLDDLIQTYSDSS----CNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~----~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
++|||+. |+|.+++....... ....+++..+..++.|+ |.|||+++++||||| |++.+|.++...+.+
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~ 165 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGM 165 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCccc
Confidence 9999997 69999997633111 12346777888888898 889999999999999 888888877766665
Q ss_pred hh
Q 042769 546 MR 547 (549)
Q Consensus 546 mr 547 (549)
.+
T Consensus 166 ~~ 167 (277)
T cd05032 166 TR 167 (277)
T ss_pred ch
Confidence 44
No 250
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.45 E-value=3e-14 Score=142.47 Aligned_cols=133 Identities=18% Similarity=0.185 Sum_probs=104.8
Q ss_pred eeeecccccccCCceEEEeeeecCchhHHHHHHHHH--hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 408 LFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL--HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~--~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
.|.+.++||+|+||.||.........||+|++.... ...+.+|++.+..+ +||||+++++++.. ...|++|||+.
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~-~~~~lv~e~~~~ 84 (262)
T cd05071 7 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYMSK 84 (262)
T ss_pred HeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhC-CCCCcceEEEEECC-CCcEEEEEcCCC
Confidence 489999999999999887533344569999887532 23567888766554 99999999998754 55799999998
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|+|.+++.... ...+++..+..++.|+ |+|||+++++||||| |++.+|.+.+..+++.
T Consensus 85 ~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~ 149 (262)
T cd05071 85 GSLLDFLKGEM----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 149 (262)
T ss_pred CcHHHHHhhcc----ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCce
Confidence 59999997622 2357888889999998 889999999999999 7788887776666554
No 251
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.45 E-value=3.4e-14 Score=140.33 Aligned_cols=127 Identities=23% Similarity=0.280 Sum_probs=101.7
Q ss_pred ccccccCCceEEEeeeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-cch
Q 042769 413 TEIAKGSNGTVVYEGIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-CSL 487 (549)
Q Consensus 413 ~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-GsL 487 (549)
++||+|+||.||+....+++.+|+|.+... ....+.+|+..+.. ++||||+++++++......+++|||+. |+|
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQ-YDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHh-CCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 379999999988865567888999977643 22346678866555 599999999999999999999999997 599
Q ss_pred hhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 488 DDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 488 ~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
.+++... ...+++..+..++.|+ |.|||+++++||||| +++.++.+....+.+
T Consensus 80 ~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~ 139 (250)
T cd05085 80 LSFLRKK-----KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGM 139 (250)
T ss_pred HHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCcc
Confidence 9988652 2357788888888888 889999999999999 778888766665543
No 252
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.45 E-value=2.6e-14 Score=143.86 Aligned_cols=131 Identities=24% Similarity=0.288 Sum_probs=107.0
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|++.+.||+|+||.||++ ...+|+.||+|++.... ...+.+|+..+..+ +||||+++++++......|+||||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC-QHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhC-CCCCCcceeeEEecCCeeEEEecc
Confidence 788899999999998874 55678999999776432 23566788665555 899999999999999999999999
Q ss_pred cccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 483 CTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 483 ~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
+.++|.+++... ...+++..++.++.|+ |+|||+.+++|+||| +++.+|......+.+
T Consensus 81 ~~~~L~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~ 145 (286)
T cd07832 81 MPSDLSEVLRDE-----ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGL 145 (286)
T ss_pred cCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeee
Confidence 966999998762 2468899999999998 889999999999999 777777766555543
No 253
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.45 E-value=3.6e-14 Score=147.44 Aligned_cols=135 Identities=19% Similarity=0.256 Sum_probs=108.6
Q ss_pred cceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccC-cceE
Q 042769 404 NVGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVEND-KDFV 476 (549)
Q Consensus 404 ~igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~-~~~~ 476 (549)
.+++.|++.+.||+|+||.||.. +..+++.||+|++.+. ......+|+..+..+ +||||+++++++.. ....
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL-RHENIISLSDIFISPLEDI 85 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhc-CCCCeeeEeeeEecCCCcE
Confidence 35666999999999999998884 6778999999977542 233566788665554 99999999998865 5578
Q ss_pred EEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 477 YLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 477 yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|++|||+.++|.++++. ..+++..+..++.|+ |.|||+++|+||||| |++.+|.+.+..+++.
T Consensus 86 ~lv~e~~~~~L~~~~~~-------~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~ 155 (328)
T cd07856 86 YFVTELLGTDLHRLLTS-------RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLA 155 (328)
T ss_pred EEEeehhccCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccc
Confidence 99999998899888764 347777888888888 889999999999999 7888888777666544
No 254
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.45 E-value=3.8e-14 Score=142.68 Aligned_cols=141 Identities=18% Similarity=0.105 Sum_probs=105.3
Q ss_pred eeeeeecccccccCCceEEEee-e-----ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcce
Q 042769 406 GKLFVSNTEIAKGSNGTVVYEG-I-----YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDF 475 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~~~-~-----~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~ 475 (549)
++.|++.+.||+|+||.||... . .+++.||+|.+... ....+.+|+..+.. ++||||+++++++.....
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~-l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE-FNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHh-CCCCCeeeEEEEEcCCCC
Confidence 3458999999999999987632 1 23567999987532 22345678865554 599999999999999999
Q ss_pred EEEEecccc-cchhhhhhhcccCCc----ccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhh
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSSC----NSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLL 543 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~~----~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~ 543 (549)
.++||||+. |+|.++++..+.... ...++...+..++.|+ |.|||+.+++||||| |+++++..+...+
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~df 163 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF 163 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCC
Confidence 999999997 699999976331100 1234556677777787 889999999999999 7888887776665
Q ss_pred hhhh
Q 042769 544 SLMR 547 (549)
Q Consensus 544 ~Lmr 547 (549)
.+.+
T Consensus 164 g~~~ 167 (277)
T cd05062 164 GMTR 167 (277)
T ss_pred CCcc
Confidence 5543
No 255
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.44 E-value=2.3e-14 Score=142.76 Aligned_cols=132 Identities=19% Similarity=0.164 Sum_probs=105.2
Q ss_pred eeeecccccccCCceEEEeeeecCchhHHHHHHHH--HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 408 LFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRA--LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
.|++.+.||+|+||.||+.....+..+|+|.+... ..+.+.+|+..+.+ ++|+||+++++++. ....|++|||+.
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~-l~~~~i~~~~~~~~-~~~~~lv~e~~~~ 84 (260)
T cd05070 7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKK-LRHDKLVQLYAVVS-EEPIYIVTEYMSK 84 (260)
T ss_pred HhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHh-cCCCceEEEEeEEC-CCCcEEEEEecCC
Confidence 48888999999999988865556778999987743 22356788866655 49999999999885 456899999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
++|.+++.... ...+++..+..++.|+ |.|||+++++||||| +++.++.++...+.+
T Consensus 85 ~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~ 148 (260)
T cd05070 85 GSLLDFLKDGE----GRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGL 148 (260)
T ss_pred CcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCcee
Confidence 59999987622 3457888899999998 889999999999999 778877766665554
No 256
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.44 E-value=5.5e-14 Score=141.65 Aligned_cols=133 Identities=20% Similarity=0.225 Sum_probs=106.6
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
.|++.+.||+|+||.||.+ ...+++.||+|++.... ...+.+|++.+..+ +|+||+++++++...+..+++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL-RHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhc-CCCCeeehhheEEECCEEEEEEe
Confidence 3889999999999998874 55678999999887532 23567888666555 89999999999999999999999
Q ss_pred ccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 482 RCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 482 ~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|+++++.+.+... ...+++..+..++.|+ |.|||+.+++||||+ +++.+|..++..+.+.
T Consensus 81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~ 147 (288)
T cd07833 81 YVERTLLELLEAS-----PGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFA 147 (288)
T ss_pred cCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecc
Confidence 9987544443331 3458889999999998 889999999999999 7788888776665543
No 257
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.44 E-value=4.7e-14 Score=142.12 Aligned_cols=131 Identities=24% Similarity=0.246 Sum_probs=106.1
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
.|+..+.||+|+||.||.. ...+++.+|+|.+... ....+.+|+..+. .++||||+++++++..+...|+||||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~-~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS-QCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHH-hcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 4778889999999998874 5567889999976532 2334567776554 45999999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+. ++|.+++.. ..+++..+..++.|+ +.|||+++++|+||| +++.+|.+....+.+.
T Consensus 84 ~~~~~l~~~i~~-------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~ 148 (277)
T cd06641 84 LGGGSALDLLEP-------GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA 148 (277)
T ss_pred CCCCcHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccc
Confidence 97 599988865 357888889999988 889999999999999 7888887766665544
No 258
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.44 E-value=2.1e-14 Score=144.71 Aligned_cols=132 Identities=23% Similarity=0.271 Sum_probs=106.1
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
.|++.+.||+|+||.||.+ ...+++.||+|++.... .+.+.+|+..+.. ++||||+++++++...+..|++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQ-LRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHh-cCCcchhhHHHhcccCCeEEEEEe
Confidence 3888899999999998874 44568999999876532 2345678865555 599999999999999999999999
Q ss_pred cccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 482 RCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 482 ~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|+++ +|..+... ...+++..+..++.|+ |.|||+.+++||||+ +++++|.+....+.+.
T Consensus 81 ~~~~~~l~~~~~~------~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~ 147 (286)
T cd07846 81 FVDHTVLDDLEKY------PNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFA 147 (286)
T ss_pred cCCccHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeee
Confidence 9986 66665544 3458889999999998 889999999999999 7888887766655543
No 259
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.44 E-value=1.5e-14 Score=145.55 Aligned_cols=133 Identities=24% Similarity=0.220 Sum_probs=107.8
Q ss_pred eeeeecccccccCCceEEEe-eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 407 KLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
+.|+..+.||+|+||.||.. ...+++.||+|.+... ..+.+.+|+..+.+ ++||||+++++++..+...|+|||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQ-CDSPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHc-CCCCccHhhhcccccCCceEEEEE
Confidence 34778889999999998874 5567889999977632 23356678865544 599999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+. ++|.+++.. ..+++..+..++.|+ +.|||+++++|+||+ +++.+|.+....+.+++
T Consensus 83 ~~~~~~L~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06642 83 YLGGGSALDLLKP-------GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAG 149 (277)
T ss_pred ccCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccc
Confidence 998 599988854 357888888899888 889999999999999 78888887776666543
No 260
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.44 E-value=5.1e-14 Score=141.35 Aligned_cols=135 Identities=24% Similarity=0.271 Sum_probs=104.5
Q ss_pred ccccccCCceEEEe-eeecCc--hhHHHHHHH----HHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 413 TEIAKGSNGTVVYE-GIYEGR--PVAVKRLVR----ALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~g~--~VAVK~i~~----~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+.||+|+||.||.. ...++. .+|+|.+.. ...+.+.+|++.+.++.+||||+++++++...+..|++|||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999998874 334454 467887663 2234566888777666689999999999999999999999997
Q ss_pred cchhhhhhhcccC----------CcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDS----------SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~----------~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.+++...... .....+++..+..++.|+ |+|||+++++||||| |++.++.++...++|.+
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence 6999999763311 112347788889999988 899999999999999 88888887777776653
No 261
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.44 E-value=3e-14 Score=141.34 Aligned_cols=133 Identities=26% Similarity=0.317 Sum_probs=108.9
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
.|++.+.||+|+||.||.. ...+++.+|+|.+... ..+.+.+|+..+.. ++||||+++++++......|++|||+
T Consensus 4 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKE-CRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred ceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHh-CCCCChhceEEEEEeCCEEEEEEeCC
Confidence 4889999999999998874 5567788999976532 23456778865544 59999999999999999999999999
Q ss_pred cc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 484 TC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 484 ~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
.| +|.+++... ...+++..+..++.|+ |.|||+++++||||| +++.+|.++...+.+.
T Consensus 83 ~~~~l~~~~~~~-----~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 148 (262)
T cd06613 83 GGGSLQDIYQVT-----RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVS 148 (262)
T ss_pred CCCcHHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccc
Confidence 85 999988762 2568899999999998 889999999999999 7888888777666543
No 262
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.44 E-value=4.5e-14 Score=142.91 Aligned_cols=128 Identities=23% Similarity=0.213 Sum_probs=101.5
Q ss_pred cccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHH--HHHhcCCCCCeeEEeeeccCcceEEEEecccc
Q 042769 414 EIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQ--NLIASDQHPNIVRWYGVENDKDFVYLSLERCT 484 (549)
Q Consensus 414 ~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~--~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~ 484 (549)
.||+|+||.||.. ...+++.+|+|.+.+.. .....+|.. .+....+||||+.+++++...+..++||||+.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999998874 55678999999765421 112223332 23344589999999999999999999999998
Q ss_pred -cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 -CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 -GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.+++.. .+.+++..+..++.|+ |+|||+++|+||||| |++.+|..+...+.+.+
T Consensus 81 ~~~L~~~i~~------~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~ 145 (279)
T cd05633 81 GGDLHYHLSQ------HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC 145 (279)
T ss_pred CCCHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcce
Confidence 599998876 4568999999999999 899999999999999 88888888777777654
No 263
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.44 E-value=3e-14 Score=152.09 Aligned_cols=134 Identities=22% Similarity=0.164 Sum_probs=109.7
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH--HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA--LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
..+..+||-|.||.||-. -+.....||||.++.. ..+.+++|...| +.++|||+|+|+|+|..+..+|||.|||.
T Consensus 269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvM-KeikHpNLVqLLGVCT~EpPFYIiTEfM~y 347 (1157)
T KOG4278|consen 269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM-KEIKHPNLVQLLGVCTHEPPFYIITEFMCY 347 (1157)
T ss_pred eeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHH-HhhcCccHHHHhhhhccCCCeEEEEecccC
Confidence 455679999999997652 2334578999999875 345688888555 55599999999999999999999999985
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.+||+.|. ...++.-..+.++.|| ++||..+++|||||- |+.+|.-.+..+++|.|
T Consensus 348 GNLLdYLRecn----r~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsR 413 (1157)
T KOG4278|consen 348 GNLLDYLRECN----RSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSR 413 (1157)
T ss_pred ccHHHHHHHhc----hhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhh
Confidence 99999999865 3456666777888899 999999999999998 89998888888777765
No 264
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.44 E-value=2.5e-14 Score=145.49 Aligned_cols=134 Identities=25% Similarity=0.255 Sum_probs=107.3
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcc-------
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKD------- 474 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~------- 474 (549)
.|++.+.||+|+||.||+. ...+|+.||+|++.... .....+|++.+..+ +||||+++++++....
T Consensus 8 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l-~h~~i~~~~~~~~~~~~~~~~~~ 86 (302)
T cd07864 8 KFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQL-NHRNIVNLKEIVTDKQDALDFKK 86 (302)
T ss_pred hhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhC-CCCCeeeeeheecCcchhhhccc
Confidence 3889999999999998884 55678999999876431 12345788665555 9999999999987655
Q ss_pred ---eEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhh
Q 042769 475 ---FVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 475 ---~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
..|+++||++++|.+++... ...+++..++.++.|+ |+|||+.+|+||||| +++.++..++..+.
T Consensus 87 ~~~~~~lv~e~~~~~l~~~l~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg 161 (302)
T cd07864 87 DKGAFYLVFEYMDHDLMGLLESG-----LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFG 161 (302)
T ss_pred cCCcEEEEEcccCccHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccc
Confidence 79999999999888887651 2468899999999999 899999999999999 78888877776665
Q ss_pred hhh
Q 042769 545 LMR 547 (549)
Q Consensus 545 Lmr 547 (549)
+++
T Consensus 162 ~~~ 164 (302)
T cd07864 162 LAR 164 (302)
T ss_pred ccc
Confidence 543
No 265
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.44 E-value=6.8e-14 Score=142.06 Aligned_cols=132 Identities=21% Similarity=0.227 Sum_probs=103.6
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|++.+.||+|++|.||+. ...+|+.||+|.+.... ...+.+|+..+..+ +||||+++++++......|+||||
T Consensus 4 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~ 82 (294)
T PLN00009 4 YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKRLYLVFEY 82 (294)
T ss_pred eEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhc-cCCCEeeEEEEEecCCeEEEEEec
Confidence 888999999999998874 55678999999886532 23456788666555 999999999999999999999999
Q ss_pred cccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccC-CCCchhhhhh
Q 042769 483 CTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKAD-GHPSPLLLSL 545 (549)
Q Consensus 483 ~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~-G~p~~~l~~L 545 (549)
++++|.+++.... ...+++..+..++.|+ |+|||+++++||||| +++.+ +..++..+.+
T Consensus 83 ~~~~l~~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~ 149 (294)
T PLN00009 83 LDLDLKKHMDSSP----DFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGL 149 (294)
T ss_pred ccccHHHHHHhCC----CCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEccccc
Confidence 9989988886522 2235677788888888 899999999999999 66643 3444544443
No 266
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.44 E-value=3.6e-14 Score=144.47 Aligned_cols=138 Identities=20% Similarity=0.163 Sum_probs=104.2
Q ss_pred eeeecccccccCCceEEEee-ee------------cC--chhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEee
Q 042769 408 LFVSNTEIAKGSNGTVVYEG-IY------------EG--RPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYG 468 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~~-~~------------~g--~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g 468 (549)
+|++.+.||+|+||.||.+. .. ++ ..||+|.+... ....+.+|++.+.++ +||||+++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~ 84 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRL-KNPNIIRLLG 84 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCcCeEEE
Confidence 48899999999999988732 11 12 34889877642 233566888766554 9999999999
Q ss_pred eccCcceEEEEecccc-cchhhhhhhcccC------CcccccCchhhhHHhhhe---eecccceeEEEeecc----cccc
Q 042769 469 VENDKDFVYLSLERCT-CSLDDLIQTYSDS------SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKA 534 (549)
Q Consensus 469 ~~~~~~~~yLVmE~~~-GsL~~~L~~~~~~------~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~ 534 (549)
++......++|||||. ++|.+++...... .....+++..+..++.|+ |+|||+++++||||| |++.
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~ 164 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGN 164 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcC
Confidence 9999999999999997 5999998652100 011235677788888888 899999999999999 7888
Q ss_pred CCCCchhhhhhh
Q 042769 535 DGHPSPLLLSLM 546 (549)
Q Consensus 535 ~G~p~~~l~~Lm 546 (549)
++.+++..+.+.
T Consensus 165 ~~~~kl~dfg~~ 176 (295)
T cd05097 165 HYTIKIADFGMS 176 (295)
T ss_pred CCcEEecccccc
Confidence 887776665554
No 267
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.44 E-value=5.5e-14 Score=141.65 Aligned_cols=134 Identities=23% Similarity=0.263 Sum_probs=105.8
Q ss_pred eeeeecccccccCCceEEEe-eeecCc----hhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEE
Q 042769 407 KLFVSNTEIAKGSNGTVVYE-GIYEGR----PVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVY 477 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~-~~~~g~----~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~y 477 (549)
..|++.+.||+|+||.||+. ...+|+ .+|+|.+... ....+.+|+..+.++ +||||+++++++.. ...+
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASV-DHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEec-CceE
Confidence 34888999999999998874 333443 5888877643 233566788666554 99999999999987 7889
Q ss_pred EEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 478 LSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
++|||+. |+|.+++... ...+++..+..++.|+ |+|||+++++||||| |++.++.+....+.+++
T Consensus 85 ~v~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~ 157 (279)
T cd05057 85 LITQLMPLGCLLDYVRNH-----KDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (279)
T ss_pred EEEecCCCCcHHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccc
Confidence 9999997 6999998762 2358889999999999 899999999999999 78888877766665543
No 268
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.44 E-value=5.7e-14 Score=140.04 Aligned_cols=134 Identities=19% Similarity=0.193 Sum_probs=104.7
Q ss_pred eeeecccccccCCceEEEeeeecCchhHHHHHHHH--HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 408 LFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRA--LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
.|.+...||+|+||.||+.....+..+|+|++... ..+.+.+|+..+.. ++||||+++++++.. +..+++|||+.
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~-~~~~~v~e~~~~ 84 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKK-LRHDKLVPLYAVVSE-EPIYIVTEFMGK 84 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHh-CCCCCeeeEEEEEcC-CCcEEEEEcCCC
Confidence 38888999999999988754444557899977643 22356678866555 599999999998854 56889999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.++++... ...+++..+..++.|+ |.|||+.+++||||| |++.++.+.+..+++.+
T Consensus 85 ~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~ 150 (260)
T cd05069 85 GSLLDFLKEGD----GKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLAR 150 (260)
T ss_pred CCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccce
Confidence 59999997622 2347788888899888 889999999999999 78888887776666543
No 269
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.44 E-value=1.2e-14 Score=155.23 Aligned_cols=132 Identities=22% Similarity=0.222 Sum_probs=108.9
Q ss_pred eeeeecccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 407 KLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
+.|.+...||.|+||+||++ .+.++-..|.|.|... ..+...-||.+|..+ +||+||+|++.|...+.++|+.||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~C-dHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAEC-DHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcC-CChHHHHHHHHHhccCceEEEEee
Confidence 34778889999999999984 6777778888988743 344567888666554 899999999999999999999999
Q ss_pred ccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhh
Q 042769 483 CTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 483 ~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
|.| -....+-. ....|+++++..++.|+ |.|||+++||||||| |+..+|...+..++
T Consensus 111 C~GGAVDaimlE-----L~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFG 175 (1187)
T KOG0579|consen 111 CGGGAVDAIMLE-----LGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFG 175 (1187)
T ss_pred cCCchHhHHHHH-----hccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeeccc
Confidence 985 67666665 24679999999999998 889999999999999 88888887776654
No 270
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.44 E-value=3.9e-14 Score=144.71 Aligned_cols=133 Identities=24% Similarity=0.313 Sum_probs=109.3
Q ss_pred eeeeecccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 407 KLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
+.|++.+.||.|+||.||.. +..+++.||+|.+... ..+.+.+|+..+. .++||||+++++++......|+|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~-~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMK-ELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHH-hcCCCceeeeeeeEecCceEEEEEEe
Confidence 45999999999999998874 6678999999977542 2334567885554 45999999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+. ++|.+++.. ..+++..+..++.|+ |.|||+++++||||| +++.+|.+.+..+.+.+
T Consensus 98 ~~~~~L~~~~~~-------~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~ 163 (296)
T cd06655 98 LAGGSLTDVVTE-------TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCA 163 (296)
T ss_pred cCCCcHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccch
Confidence 97 599988865 358889999999988 889999999999999 78888887777665543
No 271
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.44 E-value=4.2e-14 Score=142.68 Aligned_cols=133 Identities=22% Similarity=0.237 Sum_probs=107.1
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT 484 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~ 484 (549)
|++.+.||+|+||.||+. ...++..+|+|.+... ......+|+..+..+ +||||+++++++......|++|||+.
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHC-CCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 677889999999998874 5566788888876532 233456788655554 99999999999999999999999998
Q ss_pred -cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 -CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 -GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|..++.. ....+++..+..++.|+ |.|||+.+++||||| |++.+|......+.+++
T Consensus 86 ~~~l~~~~~~-----~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~ 151 (282)
T cd06643 86 GGAVDAVMLE-----LERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSA 151 (282)
T ss_pred CCcHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccc
Confidence 588887764 13468889999999998 889999999999999 78888887777666543
No 272
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.44 E-value=5.3e-14 Score=142.16 Aligned_cols=132 Identities=20% Similarity=0.211 Sum_probs=101.3
Q ss_pred eeecccccccCCceEEEe-eeecCc----hhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGR----PVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~----~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
|++.+.||+|+||.||.. ...+++ .+|+|.+.... ...+..|+..+ +.++||||+++++++.. ...+++
T Consensus 9 ~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l-~~l~h~~iv~~~~~~~~-~~~~~i 86 (279)
T cd05111 9 LRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAM-GSLDHAYIVRLLGICPG-ASLQLV 86 (279)
T ss_pred ceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHH-hcCCCCCcceEEEEECC-CccEEE
Confidence 888899999999998774 334454 47788775321 22334455344 45599999999999864 457789
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+||+. |+|.+++... ...+++..+..++.|+ |+|||+++++||||| |++.++.++...+++.+
T Consensus 87 ~e~~~~gsL~~~l~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~ 157 (279)
T cd05111 87 TQLSPLGSLLDHVRQH-----RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVAD 157 (279)
T ss_pred EEeCCCCcHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccce
Confidence 99997 7999999762 2458888999999999 899999999999999 88888888877776554
No 273
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.43 E-value=4.7e-14 Score=142.17 Aligned_cols=135 Identities=24% Similarity=0.299 Sum_probs=107.5
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH--HhhhhHHHHHHHHhcCCCCCeeEEeeeccC------cceEEEE
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA--LHDVAFKEIQNLIASDQHPNIVRWYGVEND------KDFVYLS 479 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~------~~~~yLV 479 (549)
|++.+.||+|+||.||. ....+++.+|+|++... .......|+..+....+||||+++++++.. ....|++
T Consensus 18 ~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv 97 (282)
T cd06636 18 FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLV 97 (282)
T ss_pred hhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEE
Confidence 88889999999999888 45667899999976532 223456777666666689999999999853 4578999
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||||. |+|.+++...+ ...+++..+..++.|+ |.|||+.+|+||||| +++.+|...+..+.+++
T Consensus 98 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~ 169 (282)
T cd06636 98 MEFCGAGSVTDLVKNTK----GNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 169 (282)
T ss_pred EEeCCCCcHHHHHHHcc----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchh
Confidence 99997 59999987633 3457788888888888 899999999999999 78888887776665543
No 274
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.43 E-value=8.4e-14 Score=138.02 Aligned_cols=132 Identities=21% Similarity=0.347 Sum_probs=106.2
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|++.+.||+|+||.+|. .+..+|+.||+|++... ....+.+|+..+.. ++||||+++++++...+..|+||||
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSN-MKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHh-CCCCCeeeeEeeecCCCeEEEEEec
Confidence 78889999999999887 46677899999966532 23356778866554 5999999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
+. ++|.+++.... ...+++..+..++.|+ |.|||+++++|+||+ |++.++......+.+
T Consensus 81 ~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~ 147 (256)
T cd08218 81 CEGGDLYKKINAQR----GVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGI 147 (256)
T ss_pred CCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccc
Confidence 97 59999987622 2357888888999998 889999999999999 777777766555443
No 275
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.43 E-value=3.3e-14 Score=142.32 Aligned_cols=134 Identities=25% Similarity=0.210 Sum_probs=110.4
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
.|.+.+.||+|+||.||.. ...+++.||+|++... ......+|...+..+.+||||+++++++...+..+++|
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 3888899999999998874 5567899999977642 12345677766655533999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|++. ++|.+++.. ...+++..+..++.|+ |.|||+++++|+||+ +++.+|+.....+.+++
T Consensus 82 e~~~~~~L~~~l~~------~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~ 150 (280)
T cd05581 82 EYAPNGELLQYIRK------YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAK 150 (280)
T ss_pred cCCCCCcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCcccc
Confidence 9996 699999987 4468999999999999 889999999999999 78888887777666543
No 276
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.43 E-value=5.4e-14 Score=142.64 Aligned_cols=140 Identities=17% Similarity=0.116 Sum_probs=104.4
Q ss_pred eeeeecccccccCCceEEEe-ee-----ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceE
Q 042769 407 KLFVSNTEIAKGSNGTVVYE-GI-----YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFV 476 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~-~~-----~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~ 476 (549)
+.|++.+.||+|+||.||.. .. ..+..||+|.+... ....+.+|+..+ +.++||||+++++++......
T Consensus 6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~~~~~~~~~~ 84 (288)
T cd05061 6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM-KGFTCHHVVRLLGVVSKGQPT 84 (288)
T ss_pred HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHH-HhCCCCCeeeEEEEEcCCCCc
Confidence 34889999999999998873 22 12457999976532 122355677555 445999999999999999999
Q ss_pred EEEecccc-cchhhhhhhcccCCc----ccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhh
Q 042769 477 YLSLERCT-CSLDDLIQTYSDSSC----NSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 477 yLVmE~~~-GsL~~~L~~~~~~~~----~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
|++|||+. |+|.++++....... ...++...+..++.|+ |.|||+++|+||||| |++.++.+....+.
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg 164 (288)
T cd05061 85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG 164 (288)
T ss_pred EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCC
Confidence 99999997 699999976332111 1234556677888888 899999999999999 78888877776666
Q ss_pred hhh
Q 042769 545 LMR 547 (549)
Q Consensus 545 Lmr 547 (549)
+.|
T Consensus 165 ~~~ 167 (288)
T cd05061 165 MTR 167 (288)
T ss_pred ccc
Confidence 544
No 277
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.43 E-value=3.3e-14 Score=147.74 Aligned_cols=136 Identities=26% Similarity=0.315 Sum_probs=107.6
Q ss_pred ceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc--ceE
Q 042769 405 VGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDK--DFV 476 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~--~~~ 476 (549)
+.+.|++.+.||+|+||.||.. ...+|+.+|+|++... ......+|+..+.++.+||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4445999999999999998774 4557889999977532 2234567886554444999999999987643 368
Q ss_pred EEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 477 YLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 477 yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+||||+.++|.+++.. . .+++..+..++.|+ |+|||+++|+||||| |++.+|..++..+.+.+
T Consensus 85 ~lv~e~~~~~L~~~~~~------~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 85 YLVFEYMETDLHAVIRA------N-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEEecccccCHHHHHhc------C-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 99999999999998866 2 57778888888888 899999999999999 88899888777666544
No 278
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=99.43 E-value=1.6e-13 Score=150.67 Aligned_cols=133 Identities=17% Similarity=0.267 Sum_probs=102.4
Q ss_pred CceeccCC--CccccccccceeeeeccccccccccceeeecCCcchhhhccc-cccccCCcchhhh--------hhcCCC
Q 042769 1 VSWTFGTG--TPIYSSYQAPVQATVDQDNASELTNSFFIDCGEDWGLYAHGL-LGRMKLPQSIDDY--------VKTAPH 69 (549)
Q Consensus 1 ~~W~f~tg--~~i~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~~--------v~~sP~ 69 (549)
+.|+|.++ ..+.++ |.+..+.+|.++.|+.|||+|+ +|+++|.+++... +...++
T Consensus 41 ~~W~~~~~~~~~~~~s--------------Pvv~~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~ 106 (488)
T cd00216 41 VAWTFSTGDERGQEGT--------------PLVVDGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVA 106 (488)
T ss_pred eeEEEECCCCCCcccC--------------CEEECCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcE
Confidence 47999998 567777 8888888888989999999999 9999999988653 222233
Q ss_pred cccc-cceeecceeeEEEEEEccccceeeecCCCCCCccccchhhhcccccccccchHHHHhhccCccccccccCceEEE
Q 042769 70 ITEE-GAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLF 148 (549)
Q Consensus 70 ~~~d-g~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 148 (549)
+. + +.||+|+.++.+||+|++||+++|++.....- .. .....+++.+. .++||
T Consensus 107 ~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~-------~~---------------~~~i~ssP~v~---~~~v~ 160 (488)
T cd00216 107 YW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNNDQV-------PP---------------GYTMTGAPTIV---KKLVI 160 (488)
T ss_pred Ec-cCCeEEEecCCCeEEEEECCCCCEeeeecCCCCc-------Cc---------------ceEecCCCEEE---CCEEE
Confidence 44 5 89999999999999999999999999886410 00 00011222321 27899
Q ss_pred EEcc---------cceeecccCCCCCceeeeeee
Q 042769 149 ITRT---------DYTLQSFEPNSDNVSWSMTVA 173 (549)
Q Consensus 149 i~r~---------d~~l~a~d~~~g~~~Wn~~~~ 173 (549)
+|.. ++.|+|||++||+++|++.+.
T Consensus 161 vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~ 194 (488)
T cd00216 161 IGSSGAEFFACGVRGALRAYDVETGKLLWRFYTT 194 (488)
T ss_pred EeccccccccCCCCcEEEEEECCCCceeeEeecc
Confidence 9874 578999999999999999885
No 279
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.43 E-value=6.1e-14 Score=138.90 Aligned_cols=117 Identities=15% Similarity=0.121 Sum_probs=91.9
Q ss_pred ccccccCCceEEEe-eeecC----------chhHHHHHHHHH--hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 413 TEIAKGSNGTVVYE-GIYEG----------RPVAVKRLVRAL--HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~g----------~~VAVK~i~~~~--~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
+.||+|+||.||.. ...++ ..+++|.+.... ...+.+|+..+ +.++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLM-SQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHH-HcCCCcchhheeeEEec-CCcEEE
Confidence 46999999998774 33333 357888776442 34556777555 55599999999999888 778999
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCC
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADG 536 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G 536 (549)
|||+. |+|.+++.... ..+++..+..++.|+ |+|||+++|+||||| |++.++
T Consensus 79 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~ 138 (259)
T cd05037 79 EEYVKFGPLDVFLHREK-----NNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYG 138 (259)
T ss_pred EEcCCCCcHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCc
Confidence 99997 69999998722 268888899999998 899999999999999 777776
No 280
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.43 E-value=4.4e-14 Score=140.17 Aligned_cols=133 Identities=25% Similarity=0.275 Sum_probs=108.3
Q ss_pred eeeecccccccCCceEEEeeeecCchhHHHHHHHHH--hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 408 LFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL--HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~--~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
.|++.+.||+|+||.||.+ ...|+.||+|.+.... .+.+.+|+..+..+ +|+||+++++++......+++|||++
T Consensus 7 ~~~~~~~ig~g~~g~v~~~-~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 7 ELKLGATIGKGEFGDVMLG-DYRGQKVAVKCLKDDSTAAQAFLAEASVMTTL-RHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hccceeeeecCCCceEEEE-EecCcEEEEEEeccchhHHHHHHHHHHHHHhc-CCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 3888899999999987653 4568999999887542 34567888665554 99999999999999999999999998
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
++|.++++... ...+++..+..++.|+ |.|||+++++||||| +++.+|......+.+.
T Consensus 85 ~~L~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~ 149 (256)
T cd05039 85 GSLVDYLRSRG----RAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLA 149 (256)
T ss_pred CcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccc
Confidence 59999997622 2368899999999999 889999999999999 7888887766655543
No 281
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.43 E-value=4.5e-14 Score=142.54 Aligned_cols=128 Identities=22% Similarity=0.226 Sum_probs=103.6
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
|++.++||+|+||.||+. +..+++.||+|.+... ....+.+|+..+.. ++||||+++++++...+..+++|||+
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYK-CDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHh-CCCCCeeeEEEEEEECCEEEEEEecC
Confidence 778889999999998884 6678899999977532 23346678866544 49999999999999999999999999
Q ss_pred cc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 484 TC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 484 ~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
++ +|..+. .+++..+..++.|+ |.|||+++|+||||| |++.+|.+.+..+++.+
T Consensus 82 ~~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~ 143 (279)
T cd06619 82 DGGSLDVYR----------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVST 143 (279)
T ss_pred CCCChHHhh----------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcce
Confidence 85 775432 35677888888888 889999999999999 88899888877766543
No 282
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.43 E-value=5.1e-14 Score=139.56 Aligned_cols=132 Identities=23% Similarity=0.303 Sum_probs=105.7
Q ss_pred eeecccccccCCceEEEeeeecCchhHHHHHHHHH--hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-c
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL--HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-C 485 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~--~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-G 485 (549)
|++.+.||+|+||.||+.....++.+|+|.+.... ...+.+|++.+..+ +||||+++++++......+++|||+. |
T Consensus 6 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 84 (256)
T cd05112 6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKL-SHPKLVQLYGVCTERSPICLVFEFMEHG 84 (256)
T ss_pred eEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhC-CCCCeeeEEEEEccCCceEEEEEcCCCC
Confidence 78889999999999887544557789999776431 23567788666554 99999999999999999999999998 5
Q ss_pred chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 486 SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 486 sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+|.+++... ...+++..+..++.|+ |+|||+++++||||| +++.++......+.+.
T Consensus 85 ~L~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 147 (256)
T cd05112 85 CLSDYLRAQ-----RGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMT 147 (256)
T ss_pred cHHHHHHhC-----ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcce
Confidence 999998762 2457888888888888 889999999999999 7777776666555543
No 283
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.43 E-value=6.5e-14 Score=139.92 Aligned_cols=132 Identities=22% Similarity=0.239 Sum_probs=105.7
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHH--------HHhhhhHHHHHHHHhcCCCCCeeEEeeeccCc--ceEE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVR--------ALHDVAFKEIQNLIASDQHPNIVRWYGVENDK--DFVY 477 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~--------~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~--~~~y 477 (549)
|.+.+.||+|+||.||.. ...+++.||+|.+.. .....+.+|+..+..+ +||||+++++++.+. ...+
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~ 82 (264)
T cd06653 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHDRIVQYYGCLRDPEEKKLS 82 (264)
T ss_pred eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-CCCCcceEEEEEEcCCCCEEE
Confidence 888999999999998874 567789999996531 1223566788665555 999999999998654 4688
Q ss_pred EEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 478 LSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
++|||++ ++|.+++.. ...+++..+..++.|+ |.|||+++++||||| +++.+|.+....+.+.+
T Consensus 83 ~v~e~~~~~~L~~~~~~------~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 83 IFVEYMPGGSIKDQLKA------YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEeCCCCcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccc
Confidence 9999997 599999876 4457888899999998 889999999999999 78888877766665543
No 284
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.43 E-value=4.8e-14 Score=145.39 Aligned_cols=134 Identities=25% Similarity=0.318 Sum_probs=108.4
Q ss_pred eeeeecccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 407 KLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
+.|...+.||+|+||.||+. ...++..+|+|++... ....+.+|+..+..+ +|||++++++++......|+|
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 103 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-KHPNSIEYKGCYLREHTAWLV 103 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCeEEEE
Confidence 34778889999999998874 5667899999987532 223466788665554 999999999999999999999
Q ss_pred ecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 480 LERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 480 mE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|||+.|+|.+++... ...+++..+..++.|+ |.|||+++|+||||+ +++.+|.+....+.++
T Consensus 104 ~e~~~g~l~~~~~~~-----~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~ 172 (317)
T cd06635 104 MEYCLGSASDLLEVH-----KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSA 172 (317)
T ss_pred EeCCCCCHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCc
Confidence 999999988887652 3458888999999988 899999999999999 7788887777666554
No 285
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.43 E-value=2.9e-14 Score=140.96 Aligned_cols=131 Identities=26% Similarity=0.294 Sum_probs=105.9
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH--------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA--------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~--------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
|+..+.||+|+||.||.+ ...+++.||+|.+... ....+.+|+..+.. ++|+||+++++++......|++
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSK-LQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHh-cCCCCchheeeeEecCCeEEEE
Confidence 667789999999998875 4457889999965431 23356678865544 5999999999999999999999
Q ss_pred eccccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 480 LERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 480 mE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|||++| +|.+++.. ...+++..+..++.|+ |.|||+.+++||||+ +++.++.+++..+.+.
T Consensus 81 ~e~~~~~~L~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~ 149 (258)
T cd06632 81 LELVPGGSLAKLLKK------YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMA 149 (258)
T ss_pred EEecCCCcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccc
Confidence 999985 99999977 3457888888888888 889999999999999 7788887776665543
No 286
>PHA02988 hypothetical protein; Provisional
Probab=99.43 E-value=5e-14 Score=143.24 Aligned_cols=127 Identities=20% Similarity=0.265 Sum_probs=102.5
Q ss_pred ccccccCCceEEEeeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccC----cceEEEEecc
Q 042769 413 TEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVEND----KDFVYLSLER 482 (549)
Q Consensus 413 ~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~----~~~~yLVmE~ 482 (549)
..||+|++|.||. +..+|+.||||.+.... .+.+.+|+..|.++ +||||+++++++.+ ....+++|||
T Consensus 26 ~~i~~g~~~~v~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYK-GIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-DSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEE-EEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhc-CCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 5789999998554 56789999999887531 23455888666555 99999999999876 4578999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccc-eeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDS-VKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~-~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+ |+|.+++.. ...+++.....++.|+ |.|||+ .+++||||| |++.+|.++...+++.+
T Consensus 104 ~~~g~L~~~l~~------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~ 171 (283)
T PHA02988 104 CTRGYLREVLDK------EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEK 171 (283)
T ss_pred CCCCcHHHHHhh------CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHh
Confidence 98 599999977 4467888888999888 889997 489999999 88899988877766654
No 287
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.43 E-value=6.5e-14 Score=142.27 Aligned_cols=138 Identities=24% Similarity=0.260 Sum_probs=108.0
Q ss_pred eeecccccccCCceEEEee------eecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 409 FVSNTEIAKGSNGTVVYEG------IYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~------~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
|.+.+.||+|+||.||... ..++..+|+|.+... ..+.+.+|++.+.+ ++||||+++++++...+..++|
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv 85 (291)
T cd05094 7 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTN-LQHEHIVKFYGVCGDGDPLIMV 85 (291)
T ss_pred eEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhc-CCCCCcceEEEEEccCCceEEE
Confidence 8888999999999988742 134556888877643 22456788866555 4999999999999999999999
Q ss_pred ecccc-cchhhhhhhcccC----------CcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchh
Q 042769 480 LERCT-CSLDDLIQTYSDS----------SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPL 541 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~----------~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~ 541 (549)
|||++ ++|.+++..+... .....+++..++.++.|+ |+|||+++|+||||| |++.++..+..
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~ 165 (291)
T cd05094 86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIG 165 (291)
T ss_pred EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEEC
Confidence 99997 6999999763310 112347888899999999 889999999999999 88888887777
Q ss_pred hhhhhh
Q 042769 542 LLSLMR 547 (549)
Q Consensus 542 l~~Lmr 547 (549)
.+.+.+
T Consensus 166 dfg~a~ 171 (291)
T cd05094 166 DFGMSR 171 (291)
T ss_pred CCCccc
Confidence 666543
No 288
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.43 E-value=2.6e-14 Score=144.38 Aligned_cols=134 Identities=23% Similarity=0.234 Sum_probs=107.8
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
|++.+.||+|+||.||.. ...+++.||+|.+... ....+.+|+..+.. ++||||+++++++...+..|++||||
T Consensus 3 ~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 3 IEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHK-AVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHh-cCCCcHHhhhhheecCCeEEEEEeec
Confidence 788899999999998874 5567899999976532 23456688866655 49999999999999999999999999
Q ss_pred cc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccc-eeEEEeecc----ccccCCCCchhhhhhh
Q 042769 484 TC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDS-VKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 484 ~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~-~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+| +|.+++.... ....+++..+..++.|+ |.|||+ ++|+||||| |++.+|......+++.
T Consensus 82 ~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 150 (286)
T cd06622 82 DAGSLDKLYAGGV---ATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVS 150 (286)
T ss_pred CCCCHHHHHHhcc---ccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCc
Confidence 85 9988887621 12368899999999998 889996 699999999 7788887776665543
No 289
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.43 E-value=6.9e-14 Score=138.51 Aligned_cols=131 Identities=21% Similarity=0.267 Sum_probs=102.8
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccC-cceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVEND-KDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~-~~~~yLVmE 481 (549)
|++.+.||+|+||.||. .+..+++.||+|++... ..+...+|+..+ +.++|+|++++++.+.. ....|++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLL-SQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHH-HhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 78899999999999887 45667889999977543 123455677555 44599999999988764 446899999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
|++ ++|.+++.... ...+++..+..++.|+ ++|||+++++||||| +++.++...+..+.
T Consensus 81 ~~~~~~l~~~l~~~~----~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~ 147 (257)
T cd08223 81 FCEGGDLYHKLKEQK----GKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLG 147 (257)
T ss_pred ccCCCcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEeccc
Confidence 998 59999987632 3458889999999998 889999999999999 77777766555444
No 290
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.43 E-value=5.6e-14 Score=142.50 Aligned_cols=138 Identities=20% Similarity=0.209 Sum_probs=105.6
Q ss_pred eeecccccccCCceEEEee-e-----ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEE
Q 042769 409 FVSNTEIAKGSNGTVVYEG-I-----YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYL 478 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~-~-----~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yL 478 (549)
|++.+.||+|+||.||+.. . .....+|+|.+... ....+.+|+..+.. ++||||+++++++...+..++
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQ-VNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhh-CCCCCEeeEEEEEecCCCcEE
Confidence 7788999999999988732 1 12356888876532 23456788866554 599999999999999999999
Q ss_pred Eecccc-cchhhhhhhcccC------------------CcccccCchhhhHHhhhe---eecccceeEEEeecc----cc
Q 042769 479 SLERCT-CSLDDLIQTYSDS------------------SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LW 532 (549)
Q Consensus 479 VmE~~~-GsL~~~L~~~~~~------------------~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll 532 (549)
+|||+. |+|.+++...... .....+++..+..++.|+ |+|||+++++||||| |+
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill 160 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV 160 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE
Confidence 999998 6999998763211 112347778888999998 889999999999999 78
Q ss_pred ccCCCCchhhhhhhh
Q 042769 533 KADGHPSPLLLSLMR 547 (549)
Q Consensus 533 ~~~G~p~~~l~~Lmr 547 (549)
+.++.+++..+.+.+
T Consensus 161 ~~~~~~kl~dfg~~~ 175 (290)
T cd05045 161 AEGRKMKISDFGLSR 175 (290)
T ss_pred cCCCcEEeccccccc
Confidence 888877776666543
No 291
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.43 E-value=3.5e-14 Score=143.58 Aligned_cols=131 Identities=18% Similarity=0.267 Sum_probs=106.9
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
|++.+.||+|+||+||. ....+|+.||+|++... ....+.+|++.+..+ +||||+++++++......|+||||+
T Consensus 7 ~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (284)
T cd06620 7 LETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHEC-RSPYIVSFYGAFLNENNICMCMEFM 85 (284)
T ss_pred HHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHc-CCCCcceEeeeEecCCEEEEEEecC
Confidence 88889999999999887 45567889999865532 234566888766555 9999999999999999999999999
Q ss_pred c-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccc-eeEEEeecc----ccccCCCCchhhhhhh
Q 042769 484 T-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDS-VKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 484 ~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~-~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+ |+|.+++.. .+.+++..+..++.|+ |.|||+ .+++||||| +++.++.+....+.+.
T Consensus 86 ~~~~L~~~~~~------~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~ 151 (284)
T cd06620 86 DCGSLDRIYKK------GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVS 151 (284)
T ss_pred CCCCHHHHHHh------ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcc
Confidence 8 599988876 4568888999999888 889996 689999999 7788877766665544
No 292
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.43 E-value=2.1e-13 Score=144.46 Aligned_cols=136 Identities=15% Similarity=0.112 Sum_probs=99.3
Q ss_pred cccccceeeecCCcchhhhccc-cccccCCcchhh-----------hhhcCCCcccccceeecceeeEEEEEEcccccee
Q 042769 29 SELTNSFFIDCGEDWGLYAHGL-LGRMKLPQSIDD-----------YVKTAPHITEEGAVTLGSKTTTVFVLEAKTGRLI 96 (549)
Q Consensus 29 ~~~~~~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~-----------~v~~sP~~~~dg~v~~Gsk~~~~~~vda~tG~~~ 96 (549)
|.+..+.+|.+..+|.+|++|. +|.+.|.+.+.. .+.++|.+. +|.||+++.++.+|++|++||+++
T Consensus 186 p~~~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~-~~~vy~~~~~g~l~a~d~~tG~~~ 264 (377)
T TIGR03300 186 PVIADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVD-GGQVYAVSYQGRVAALDLRSGRVL 264 (377)
T ss_pred CEEECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEE-CCEEEEEEcCCEEEEEECCCCcEE
Confidence 5565667788889999999999 999999876532 145789887 899999999999999999999999
Q ss_pred eecCCCCCCccccchhhhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCceeeee-eehh
Q 042769 97 RTYGSPHSSSTLQNEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVSWSMT-VAEI 175 (549)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~Wn~~-~~~~ 175 (549)
|+...... ..+.. ..+.||++..|+.|+++|+.+|+++|+.+ ....
T Consensus 265 W~~~~~~~-----------------------------~~p~~----~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~ 311 (377)
T TIGR03300 265 WKRDASSY-----------------------------QGPAV----DDNRLYVTDADGVVVALDRRSGSELWKNDELKYR 311 (377)
T ss_pred EeeccCCc-----------------------------cCceE----eCCEEEEECCCCeEEEEECCCCcEEEccccccCC
Confidence 98864320 11111 12799999999999999999999999984 4433
Q ss_pred hhhhhccccCCcccccccccc-ccc
Q 042769 176 GYAFLCQDFENPFIGATMNTS-YEL 199 (549)
Q Consensus 176 ~a~~~~~~~~~~~~~~~~~~~-~~l 199 (549)
....|... ++..++.+.++. +.+
T Consensus 312 ~~ssp~i~-g~~l~~~~~~G~l~~~ 335 (377)
T TIGR03300 312 QLTAPAVV-GGYLVVGDFEGYLHWL 335 (377)
T ss_pred ccccCEEE-CCEEEEEeCCCEEEEE
Confidence 33444442 223343344444 444
No 293
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.43 E-value=7e-14 Score=139.14 Aligned_cols=125 Identities=25% Similarity=0.272 Sum_probs=99.0
Q ss_pred cccccCCceEEEe---eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 414 EIAKGSNGTVVYE---GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 414 ~LG~G~fG~V~~~---~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+||+|+||.||.. ...++..+|+|++... ..+.+.+|+..+ +.++||||+++++++.. +..+++|||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVM-QQLDNPYIVRMIGICEA-ESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHH-HhCCCCCcceEEEEEcC-CCcEEEEecCCC
Confidence 6899999998873 3456788999987632 233566777555 44599999999998864 46789999998
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|+|.+++.. ...+++..+..++.|+ |+|||+++|+||||| |++.++..+...+.+.
T Consensus 80 ~~L~~~l~~------~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~ 142 (257)
T cd05116 80 GPLNKFLQK------NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLS 142 (257)
T ss_pred CcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccc
Confidence 699999976 4468899999999999 889999999999999 7788877666665544
No 294
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.43 E-value=7.7e-14 Score=139.39 Aligned_cols=133 Identities=20% Similarity=0.171 Sum_probs=104.7
Q ss_pred eeeecccccccCCceEEEe-eeecC---chhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEG---RPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g---~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
.|+..+.||+|+||.||+. ...++ ..+|+|.+... ..+.+..|+..+ +.++||||+++++++...+..|++
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 6 HITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIM-GQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHH-hcCCCCCeeEEEEEEccCCCcEEE
Confidence 3778899999999998874 33333 36899887643 233566788555 455999999999999999999999
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|||++ ++|.+++... ...+++..+..++.|+ |+|||+.+++||||| |++.++...+..+.+.
T Consensus 85 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~ 154 (268)
T cd05063 85 TEYMENGALDKYLRDH-----DGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLS 154 (268)
T ss_pred EEcCCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccc
Confidence 99998 5999998762 2457888899999988 899999999999999 7777777666655544
No 295
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.42 E-value=3.6e-14 Score=145.42 Aligned_cols=132 Identities=28% Similarity=0.363 Sum_probs=106.4
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHHh-----hhhHHHHHHHHhcCCCCCeeEEeeeccCc--ceEEEEe
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRALH-----DVAFKEIQNLIASDQHPNIVRWYGVENDK--DFVYLSL 480 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~~-----~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~--~~~yLVm 480 (549)
|++.+.||+|+||.||+. ...+|+.||+|.+..... ....+|+..+.++ +|+||+++++++... +..++||
T Consensus 9 y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~ 87 (309)
T cd07845 9 FEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNL-RHPNIVELKEVVVGKHLDSIFLVM 87 (309)
T ss_pred eeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhC-CCCCCcceEEEEecCCCCeEEEEE
Confidence 999999999999998874 566799999998764321 1345788666554 999999999998755 4689999
Q ss_pred cccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 481 ERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 481 E~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
||+.++|.+++... ...+++..+..++.|+ |+|||+++++||||| |++.+|...+..+.+.
T Consensus 88 e~~~~~l~~~l~~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~ 155 (309)
T cd07845 88 EYCEQDLASLLDNM-----PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLA 155 (309)
T ss_pred ecCCCCHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcccee
Confidence 99999999888762 2468889999999999 889999999999999 7888887666655543
No 296
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.42 E-value=6.5e-14 Score=141.56 Aligned_cols=128 Identities=23% Similarity=0.200 Sum_probs=101.1
Q ss_pred cccccCCceEEEe-eeecCchhHHHHHHHHHh------hhhHHHHH--HHHhcCCCCCeeEEeeeccCcceEEEEecccc
Q 042769 414 EIAKGSNGTVVYE-GIYEGRPVAVKRLVRALH------DVAFKEIQ--NLIASDQHPNIVRWYGVENDKDFVYLSLERCT 484 (549)
Q Consensus 414 ~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~~------~~~~~Ei~--~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~ 484 (549)
.||+|+||.||.. +..+++.||+|.+.+... .....|.. .+.+...||||+++++++...+..|+||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999998874 566789999997764311 11223321 23334589999999999999999999999998
Q ss_pred -cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 -CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 -GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.+++.. .+.+++..+..++.|+ |.|||+.+|+||||| |++.++..++..+++.+
T Consensus 81 g~~L~~~l~~------~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~ 145 (278)
T cd05606 81 GGDLHYHLSQ------HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC 145 (278)
T ss_pred CCcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCcc
Confidence 599888866 4568999999999998 889999999999999 78888887777776654
No 297
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.42 E-value=3.1e-14 Score=143.24 Aligned_cols=135 Identities=21% Similarity=0.307 Sum_probs=109.4
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
|++.+.||+|+||+||.. ...+++.||+|++.... .....+|+..+.++.+||||+++++++..++..|+||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567789999999998774 44568899999877542 1234568877766634999999999999999999999999
Q ss_pred ccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 484 TCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 484 ~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
.|+|.+++.... ...+++..+..++.|+ |.|||+++++|+||+ +++.+|.+....+++++
T Consensus 81 ~~~l~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 81 EGNLYQLMKDRK----GKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred CCCHHHHHHhcc----cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccce
Confidence 889999887622 2468889999999999 889999999999999 78888888877766553
No 298
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.42 E-value=4.8e-14 Score=142.95 Aligned_cols=138 Identities=20% Similarity=0.147 Sum_probs=106.5
Q ss_pred eeecccccccCCceEEEe-eee----------------cCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEe
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIY----------------EGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWY 467 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~----------------~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~ 467 (549)
|++.+.||+|+||.||+. ... .+..||+|.+... ..+.+.+|++.+..+ +||||++++
T Consensus 7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~ 85 (296)
T cd05051 7 LNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRL-SDPNIARLL 85 (296)
T ss_pred CcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhc-CCCCEeEEE
Confidence 888999999999998873 222 1245788877643 234566788666555 999999999
Q ss_pred eeccCcceEEEEecccc-cchhhhhhhcccC-----CcccccCchhhhHHhhhe---eecccceeEEEeecc----cccc
Q 042769 468 GVENDKDFVYLSLERCT-CSLDDLIQTYSDS-----SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKA 534 (549)
Q Consensus 468 g~~~~~~~~yLVmE~~~-GsL~~~L~~~~~~-----~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~ 534 (549)
+++..++..+++||++. ++|.+++...... .....+++..++.++.|+ |+|||+++++||||| |++.
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~ 165 (296)
T cd05051 86 GVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGK 165 (296)
T ss_pred EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecC
Confidence 99999999999999997 5999999773311 011257888899999998 899999999999999 7777
Q ss_pred CCCCchhhhhhhh
Q 042769 535 DGHPSPLLLSLMR 547 (549)
Q Consensus 535 ~G~p~~~l~~Lmr 547 (549)
++......+.+.+
T Consensus 166 ~~~~~l~dfg~~~ 178 (296)
T cd05051 166 NYTIKIADFGMSR 178 (296)
T ss_pred CCceEEcccccee
Confidence 7777666665543
No 299
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.42 E-value=1.1e-13 Score=139.29 Aligned_cols=128 Identities=20% Similarity=0.141 Sum_probs=100.2
Q ss_pred eeeecccccccCCceEEEe-eee-----cCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEE
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIY-----EGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVY 477 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~-----~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~y 477 (549)
.|.+.+.||+|+||.||+. ... ++..||+|.+... ....+.+|+..+.. ++|+||+++++++......+
T Consensus 7 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05036 7 SITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSK-FNHQNIVRLIGVSFERLPRF 85 (277)
T ss_pred HcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEccCCCcE
Confidence 3888899999999998874 333 5678899976532 22346678865544 59999999999999999999
Q ss_pred EEecccc-cchhhhhhhcccCC-cccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCC
Q 042769 478 LSLERCT-CSLDDLIQTYSDSS-CNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADG 536 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~-~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G 536 (549)
++|||+. |+|.+++...+... ....+++..+..++.|+ |+|||+++++||||| |++.+|
T Consensus 86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~ 153 (277)
T cd05036 86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKG 153 (277)
T ss_pred EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccC
Confidence 9999997 59999998744211 11357888889999999 899999999999999 676655
No 300
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.42 E-value=6.8e-14 Score=139.45 Aligned_cols=134 Identities=19% Similarity=0.127 Sum_probs=104.9
Q ss_pred eeeeeecccccccCCceEEEeeeecCchhHHHHHHHH--HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 406 GKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRA--LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
.+.|++.+.||+|+||.||+.....+..+|+|.+... ..+.+.+|+..+.. ++|+||+++++++.. ...|++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKT-LQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHh-cCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 3448999999999999988865556677999977642 23456788866555 599999999999887 7789999999
Q ss_pred c-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 484 T-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 484 ~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
+ |+|.+++.... ...++...+..++.|+ |.|||+.+++||||| +++.++.++...+.+
T Consensus 83 ~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~ 148 (260)
T cd05073 83 AKGSLLDFLKSDE----GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGL 148 (260)
T ss_pred CCCcHHHHHHhCC----ccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcc
Confidence 7 69999997632 3346777788888888 889999999999999 777777666555443
No 301
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.42 E-value=7.4e-14 Score=140.15 Aligned_cols=130 Identities=20% Similarity=0.154 Sum_probs=97.2
Q ss_pred cccccCCceEEEeeeecCc---hhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-c
Q 042769 414 EIAKGSNGTVVYEGIYEGR---PVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-C 485 (549)
Q Consensus 414 ~LG~G~fG~V~~~~~~~g~---~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-G 485 (549)
+||+|+||.||+....++. .+++|.+... ....+.+|+..+ +.++||||+++++++......|++||||. |
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~-~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPY-RILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHH-hccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 6999999998875433333 3445544422 233566777444 45599999999999999999999999998 5
Q ss_pred chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 486 SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 486 sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+|.+++..... ....+++..+..++.|+ |+|||+++++||||| |++.+|..+...+++.
T Consensus 81 ~L~~~l~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~ 146 (268)
T cd05086 81 DLKSYLSQEQW--HRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIG 146 (268)
T ss_pred cHHHHHHhhhc--ccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccc
Confidence 99999976321 12345666777888888 899999999999999 8888888777776653
No 302
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.42 E-value=6.6e-14 Score=138.91 Aligned_cols=131 Identities=25% Similarity=0.317 Sum_probs=104.9
Q ss_pred eeecccccccCCceEEEeeeecCchhHHHHHHHH-HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-cc
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRA-LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-CS 486 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~-~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-Gs 486 (549)
|++.+.||+|+||.||. +..+++.||+|.+... ..+.+.+|+..+.. ++||||+++++++..+ ..+++|||+. |+
T Consensus 8 ~~~~~~lg~g~~g~v~~-~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~ 84 (254)
T cd05083 8 LTLGEIIGEGEFGAVLQ-GEYTGQKVAVKNIKCDVTAQAFLEETAVMTK-LHHKNLVRLLGVILHN-GLYIVMELMSKGN 84 (254)
T ss_pred ceeeeeeccCCCCceEe-cccCCCceEEEeecCcchHHHHHHHHHHHHh-CCCCCcCeEEEEEcCC-CcEEEEECCCCCC
Confidence 88899999999998765 4568889999987643 23356778866544 5999999999998765 4799999998 59
Q ss_pred hhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 487 LDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 487 L~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|.+++.... ...+++..+..++.|+ |.|||+++++||||| |++.+|.+....+.++
T Consensus 85 L~~~l~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~ 147 (254)
T cd05083 85 LVNFLRTRG----RALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLA 147 (254)
T ss_pred HHHHHHhcC----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccc
Confidence 999997632 2357888888888888 889999999999999 7888888777666544
No 303
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.42 E-value=5.6e-14 Score=145.61 Aligned_cols=124 Identities=21% Similarity=0.183 Sum_probs=98.3
Q ss_pred cccccc--CCceEEE-eeeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc
Q 042769 413 TEIAKG--SNGTVVY-EGIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT 484 (549)
Q Consensus 413 ~~LG~G--~fG~V~~-~~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~ 484 (549)
..||+| +||+||. .+..+|+.||+|++... ..+.+.+|+. +.+.++||||+++++++...+..+++|||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~-~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVV-LSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHH-HHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 467777 8888887 46678999999987642 1234556764 4555699999999999999999999999998
Q ss_pred -cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchh
Q 042769 485 -CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPL 541 (549)
Q Consensus 485 -GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~ 541 (549)
|+|.+++.... ...+++..+..++.|+ |+|||+++|+||||| |++.+|..+..
T Consensus 83 ~~~l~~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~ 143 (328)
T cd08226 83 YGSANSLLKTYF----PEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLS 143 (328)
T ss_pred CCCHHHHHHhhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEe
Confidence 59999988732 2358888888999998 899999999999999 77777655443
No 304
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.42 E-value=6.3e-14 Score=138.55 Aligned_cols=133 Identities=24% Similarity=0.331 Sum_probs=109.5
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHHH-hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
.|+..+.||+|+||.||.. ...+++.+|+|.+.... .+.+.+|+..+.++ +||||+++++++......|+++||+.
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~ 82 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLWIVMEYCGA 82 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEEEEEecCCC
Confidence 4888999999999998874 44558899999776442 45677888766555 99999999999999999999999998
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
++|.+++... ...+++..+..++.|+ |.|||+.+++||||+ +++.+|.+....+.+.
T Consensus 83 ~~L~~~l~~~-----~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~ 146 (256)
T cd06612 83 GSVSDIMKIT-----NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVS 146 (256)
T ss_pred CcHHHHHHhC-----ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccc
Confidence 4999998752 3468889999999998 889999999999999 7788887776655543
No 305
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.42 E-value=6.2e-15 Score=152.77 Aligned_cols=132 Identities=24% Similarity=0.268 Sum_probs=109.4
Q ss_pred eeeeecccccccCCceEEE-eeeecCchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 407 KLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
..|...++||+|+||.||+ .+..+++.||+|++..+. .+...+|+..| +.++++||.++|+.+.....++++||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~L-s~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVL-SQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHH-HhcCcchHHhhhhheeecccHHHHHH
Confidence 3477779999999999888 478899999999988653 23566788555 44599999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
||. |++.++++. ...+.+..+..+++++ |.|||..+.+||||| |+..+|..+..++..
T Consensus 92 y~~gGsv~~lL~~------~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgV 157 (467)
T KOG0201|consen 92 YCGGGSVLDLLKS------GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGV 157 (467)
T ss_pred HhcCcchhhhhcc------CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecce
Confidence 998 599999987 4445888888888887 889999999999999 777778777766553
No 306
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.42 E-value=7.4e-14 Score=137.78 Aligned_cols=134 Identities=26% Similarity=0.235 Sum_probs=106.0
Q ss_pred ccccccCCceEEEe-eeec---CchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc
Q 042769 413 TEIAKGSNGTVVYE-GIYE---GRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~---g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~ 484 (549)
+.||+|+||.||.+ .... +..||+|.+.... ...+.+|+..+..+ +|+||+++++++......+++|||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL-GHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhc-CCCChheeeeeecCCCceEEEEEecc
Confidence 47999999998874 3333 7889999887542 34566788666555 79999999999999999999999996
Q ss_pred -cchhhhhhhcccC---CcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 -CSLDDLIQTYSDS---SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 -GsL~~~L~~~~~~---~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.+++...... .....+++..+..++.|+ |+|||+++++||||| +++.+|.+.+..+.+.+
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~ 153 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSR 153 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccc
Confidence 6999999873100 002568999999999998 889999999999999 88888887777665543
No 307
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.42 E-value=8.3e-14 Score=139.82 Aligned_cols=131 Identities=21% Similarity=0.168 Sum_probs=112.3
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHHHh------hhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRALH------DVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~~------~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|.+.++||+|+|++|+. +.+.+.+.+|+|+++++.. +-.+.|-....+..+||.+|-|+.||+.+..+++|.|
T Consensus 252 f~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvie 331 (593)
T KOG0695|consen 252 FDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIE 331 (593)
T ss_pred ceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEE
Confidence 99999999999999887 5778899999999998632 1234455455566699999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
|++ |+|.-.+++ +..++++.++.+...| |.|||++|||.|||| |+|..||.++...++
T Consensus 332 yv~ggdlmfhmqr------qrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygm 397 (593)
T KOG0695|consen 332 YVNGGDLMFHMQR------QRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGM 397 (593)
T ss_pred EecCcceeeehhh------hhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccch
Confidence 998 599888887 5679999999999998 789999999999999 899999988776554
No 308
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.42 E-value=5.6e-14 Score=145.80 Aligned_cols=133 Identities=23% Similarity=0.276 Sum_probs=107.6
Q ss_pred eeecccccccCCceEEEe-eeec--CchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccC----cceE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYE--GRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVEND----KDFV 476 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~--g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~----~~~~ 476 (549)
|.+.+.||+|+||.||.. ...+ +..||+|++... ..+...+|+..+.++.+||||+++++++.. ...+
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 788899999999998874 4445 788999987642 133466788777776579999999987532 2458
Q ss_pred EEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 477 YLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 477 yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+++|++.++|.+++.. ...+++..++.++.|+ |+|||+++|+||||| |++.+|.+.+..+++.+
T Consensus 82 ~~~~e~~~~~L~~~l~~------~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 82 YLYEELMEADLHQIIRS------GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEecccCCHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 89999999999999876 4568899999999999 899999999999999 88889888877776654
No 309
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.42 E-value=7.6e-14 Score=140.61 Aligned_cols=132 Identities=22% Similarity=0.244 Sum_probs=103.1
Q ss_pred eeeecccccccCCceEEEe-eeecCc----hhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEE
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGR----PVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYL 478 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~----~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yL 478 (549)
.|+..+.||+|+||.||+. ...+++ .||+|.+... ....+.+|+..+. .++||||+++++++.. ...++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~-~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMA-GVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHH-hcCCCCCceEEEEEcC-CCcEE
Confidence 4888999999999998874 344554 4789977532 2334556775554 4599999999999875 45779
Q ss_pred Eecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 479 SLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 479 VmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+|||++ |+|.++++.. ...+++..+..++.|+ |+|||+++|+||||| |++.++.+++..+.++
T Consensus 86 ~~~~~~~g~l~~~l~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~ 156 (279)
T cd05109 86 VTQLMPYGCLLDYVREN-----KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLA 156 (279)
T ss_pred EEEcCCCCCHHHHHhhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCce
Confidence 999997 6999998762 2458889999999999 889999999999999 7788888777666554
No 310
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.42 E-value=7.7e-14 Score=140.54 Aligned_cols=127 Identities=23% Similarity=0.168 Sum_probs=102.0
Q ss_pred ccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-cc
Q 042769 415 IAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-CS 486 (549)
Q Consensus 415 LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-Gs 486 (549)
||+|+||+||.+ ...+|+.||+|.+.... ...+.+|+..+.. ++||||+++++.+...+..|+||||++ ++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEK-VSSRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHh-CCCCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 689999998884 55678999999765421 2234568766544 489999999999999999999999998 59
Q ss_pred hhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 487 LDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 487 L~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|.+++.... ...+++..+..++.|+ |.|||+++++||||+ |++.+|.+....+.+.
T Consensus 80 L~~~l~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~ 142 (277)
T cd05577 80 LKYHIYNVG----EPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLA 142 (277)
T ss_pred HHHHHHHcC----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcch
Confidence 999987632 2368888999998888 889999999999999 7888887777666544
No 311
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.42 E-value=5.4e-14 Score=141.65 Aligned_cols=131 Identities=25% Similarity=0.240 Sum_probs=106.9
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
.|+..+.||+|+||.||.. +..+++.||+|.+... ....+.+|+..+.. ++||||+++++++.++...|+||||
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ-CDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEEECCEEEEEEec
Confidence 4778889999999998884 5667889999976532 23356678765544 5999999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+. |+|.+++.. +.+++..+..++.|+ |+|||+++++|+||+ +++.+|.+.+..+.++
T Consensus 84 ~~~~~L~~~i~~-------~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~ 148 (277)
T cd06640 84 LGGGSALDLLRA-------GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred CCCCcHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccc
Confidence 97 599998865 347888888888888 889999999999999 7888888777666654
No 312
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.42 E-value=8.6e-14 Score=138.91 Aligned_cols=126 Identities=21% Similarity=0.207 Sum_probs=98.7
Q ss_pred cccccCCceEEEee---eecCchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-c
Q 042769 414 EIAKGSNGTVVYEG---IYEGRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-C 485 (549)
Q Consensus 414 ~LG~G~fG~V~~~~---~~~g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-G 485 (549)
.||+|+||.||... ..++..||+|.+.... .+.+.+|+..+.+ ++||||+++++++.. ...++||||++ |
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~-l~h~~ii~~~~~~~~-~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQ-LDNPYIVRMIGVCEA-EALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHh-cCCCCeEEEEEEEcC-CCeEEEEEeCCCC
Confidence 48999999987632 2345679999776432 2346688866555 599999999999864 56899999997 5
Q ss_pred chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 486 SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 486 sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+|.+++... ...+++..++.++.|+ |.|||+++++||||| |++.++.++...+.++
T Consensus 80 ~L~~~l~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~ 142 (257)
T cd05115 80 PLNKFLSGK-----KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLS 142 (257)
T ss_pred CHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCcc
Confidence 999998752 3468899999999999 889999999999999 7788887777666554
No 313
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.42 E-value=6.9e-14 Score=141.58 Aligned_cols=138 Identities=21% Similarity=0.134 Sum_probs=106.7
Q ss_pred eeeecccccccCCceEEEeee------ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEE
Q 042769 408 LFVSNTEIAKGSNGTVVYEGI------YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVY 477 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~~~------~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~y 477 (549)
.|+..+.||+|+||.||.... .++..||+|.+... ....+.+|+..+ +.++||||+++++++......+
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l-~~l~h~~iv~~~~~~~~~~~~~ 84 (288)
T cd05050 6 NIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALM-AEFDHPNIVKLLGVCAVGKPMC 84 (288)
T ss_pred hceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHH-HhcCCCchheEEEEEcCCCccE
Confidence 388889999999999887422 25678999987643 223466788655 4459999999999999999999
Q ss_pred EEecccc-cchhhhhhhcccC----------------CcccccCchhhhHHhhhe---eecccceeEEEeecc----ccc
Q 042769 478 LSLERCT-CSLDDLIQTYSDS----------------SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWK 533 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~----------------~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~ 533 (549)
++|||+. |+|.+++...... .....+++..+..++.|+ |.|||+++++||||| |++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~ 164 (288)
T cd05050 85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVG 164 (288)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEec
Confidence 9999998 5999999753211 111246777888899988 899999999999999 778
Q ss_pred cCCCCchhhhhhh
Q 042769 534 ADGHPSPLLLSLM 546 (549)
Q Consensus 534 ~~G~p~~~l~~Lm 546 (549)
.+|...+..+.+.
T Consensus 165 ~~~~~~l~dfg~~ 177 (288)
T cd05050 165 ENMVVKIADFGLS 177 (288)
T ss_pred CCCceEECccccc
Confidence 8887776666543
No 314
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.41 E-value=6.1e-14 Score=138.43 Aligned_cols=133 Identities=21% Similarity=0.185 Sum_probs=106.1
Q ss_pred eecccccccCCceEEEe-eeec----CchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 410 VSNTEIAKGSNGTVVYE-GIYE----GRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 410 ~~~~~LG~G~fG~V~~~-~~~~----g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
++.+.||.|+||.||.+ .... +..||+|.+.... ...+..|+..+..+ +|+||+++++++...+..|++|
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeEEEE
Confidence 45678999999998874 3333 3889999887432 33566788766666 9999999999999999999999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||+. ++|.+++.... ...+++..+..++.|+ |+|||+.+++||||| +++.+|......+.+.+
T Consensus 81 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~ 151 (258)
T smart00219 81 EYMEGGDLLDYLRKNR----PKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSR 151 (258)
T ss_pred eccCCCCHHHHHHhhh----hccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCce
Confidence 9998 59999997622 1228899999999999 889999999999999 78888876666655543
No 315
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.41 E-value=8.6e-14 Score=138.04 Aligned_cols=131 Identities=20% Similarity=0.253 Sum_probs=110.0
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
|++.+.||+|++|.||+. ...+++.||+|++... ....+.+|+..+..+ +|+||+++++++......+++|||+
T Consensus 3 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 3 LERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSC-ESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred ceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhc-CCCCeeeEEEEEccCCeEEEEEEec
Confidence 788899999999998884 5567999999977654 234566788666555 8999999999999999999999999
Q ss_pred c-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccc-eeEEEeecc----ccccCCCCchhhhhhh
Q 042769 484 T-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDS-VKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 484 ~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~-~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+ ++|.+++.. ...+++..+..++.|+ |+|||+ ++++||||+ +++.+|.+.+..+.+.
T Consensus 82 ~~~~L~~~l~~------~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~ 147 (264)
T cd06623 82 DGGSLADLLKK------VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGIS 147 (264)
T ss_pred CCCcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccc
Confidence 8 699999987 3568899999999998 889999 999999999 7888887776665544
No 316
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.41 E-value=6.5e-14 Score=146.44 Aligned_cols=136 Identities=22% Similarity=0.302 Sum_probs=108.5
Q ss_pred cceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc----
Q 042769 404 NVGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDK---- 473 (549)
Q Consensus 404 ~igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~---- 473 (549)
.+.+.|.+.+.||+|+||.||.. ...+++.||+|++... ......+|+..+.+ ++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~-l~h~~iv~~~~~~~~~~~~~ 92 (345)
T cd07877 14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKH-MKHENVIGLLDVFTPARSLE 92 (345)
T ss_pred hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHH-cCCCcccceeeeeeeccccc
Confidence 34456999999999999998874 5677999999987532 12345678865555 4999999999987543
Q ss_pred --ceEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhh
Q 042769 474 --DFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 474 --~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
...|++++++.++|.++++. ..+++..+..++.|+ |+|||+++|+||||| +++.+|......+.
T Consensus 93 ~~~~~~lv~~~~~~~L~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg 165 (345)
T cd07877 93 EFNDVYLVTHLMGADLNNIVKC-------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 165 (345)
T ss_pred ccccEEEEehhcccCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccc
Confidence 34789999998899888764 358889999999998 889999999999999 78888888777766
Q ss_pred hhh
Q 042769 545 LMR 547 (549)
Q Consensus 545 Lmr 547 (549)
+++
T Consensus 166 ~~~ 168 (345)
T cd07877 166 LAR 168 (345)
T ss_pred ccc
Confidence 654
No 317
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.41 E-value=4.3e-14 Score=140.39 Aligned_cols=131 Identities=23% Similarity=0.371 Sum_probs=107.4
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|+..+.||+|+||.||.. ...+++.||+|.+... ....+..|+..+..+ +|+||+++++++...+..++++||
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELL-KHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhC-CCCChhheeeeEecCCEEEEEEec
Confidence 788899999999998774 4557889999976633 234566788665555 999999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+. ++|.+++.. ...+++..+..++.|+ |+|||+++++||||+ +++.+|.+....+.++
T Consensus 81 ~~~~~L~~~~~~------~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 81 CSGGTLEELLEH------GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred CCCCcHHHHHhh------cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccc
Confidence 98 599999876 3457888888998888 899999999999999 7888887776665544
No 318
>PTZ00284 protein kinase; Provisional
Probab=99.41 E-value=7.8e-14 Score=152.05 Aligned_cols=126 Identities=15% Similarity=0.140 Sum_probs=97.2
Q ss_pred eeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH--HhhhhHHHHHHHHh-----cCCCCCeeEEeeeccCc-ceE
Q 042769 406 GKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA--LHDVAFKEIQNLIA-----SDQHPNIVRWYGVENDK-DFV 476 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~-----~l~HpNIVrl~g~~~~~-~~~ 476 (549)
.+.|++.++||+|+||+||++ +..+++.||||+++.. .......|++.+.. ...|++|+++++++... .+.
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 345999999999999999884 6677899999987531 22233445544322 23456799999888754 578
Q ss_pred EEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccc-eeEEEeecc----ccccCCC
Q 042769 477 YLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDS-VKVIIRDLS----LWKADGH 537 (549)
Q Consensus 477 yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~-~~IIHRDLK----Ll~~~G~ 537 (549)
|+|||++.++|.+++.+ .+.+++..+..++.|+ |+|||. .+||||||| |++.+|.
T Consensus 208 ~iv~~~~g~~l~~~l~~------~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~ 270 (467)
T PTZ00284 208 CIVMPKYGPCLLDWIMK------HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDT 270 (467)
T ss_pred EEEEeccCCCHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCc
Confidence 99999998899999877 4568999999999999 899997 699999999 7776653
No 319
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.41 E-value=1.3e-13 Score=138.20 Aligned_cols=119 Identities=15% Similarity=0.147 Sum_probs=90.7
Q ss_pred ccccccCCceEEEeeee-------------cCchhHHHHHHHHH---hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceE
Q 042769 413 TEIAKGSNGTVVYEGIY-------------EGRPVAVKRLVRAL---HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFV 476 (549)
Q Consensus 413 ~~LG~G~fG~V~~~~~~-------------~g~~VAVK~i~~~~---~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~ 476 (549)
+.||+|+||.||..-.. ....+|+|.+.... ...+.+|+. +++.++||||+++++++..+...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~-~l~~l~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETAS-MMRQVSHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHH-HHHhCCCCCEeeEEEEEecCCCC
Confidence 36899999998763211 12357888766432 223445654 44556999999999999999999
Q ss_pred EEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCC
Q 042769 477 YLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGH 537 (549)
Q Consensus 477 yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~ 537 (549)
+++|||++ |+|..++... ...+++.++..++.|+ |+|||+++|+||||| |++.+|.
T Consensus 80 ~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~ 143 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRK-----SDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGI 143 (262)
T ss_pred EEEEecccCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCc
Confidence 99999998 5888887651 3458889999999999 899999999999999 7766553
No 320
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.41 E-value=3.8e-14 Score=142.79 Aligned_cols=133 Identities=23% Similarity=0.289 Sum_probs=108.2
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|++.+.||.|++|.||+. ...+|+.||+|++.... ...+.+|+..+..+ +||||+++++++...+..|++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKEL-NHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhc-CCCCccCHhheeccCCeEEEEEec
Confidence 566789999999998874 56689999999876431 23456788665554 999999999999999999999999
Q ss_pred cccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 483 CTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 483 ~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
++++|.+++.... ...+++..+..++.|+ |+|||+++++||||+ +++.+|.+.+..+.+.
T Consensus 80 ~~~~l~~~~~~~~----~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~ 146 (283)
T cd07835 80 LDLDLKKYMDSSP----LTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLA 146 (283)
T ss_pred cCcCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccc
Confidence 9889999987622 2368899999999998 899999999999999 7888887776665543
No 321
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.41 E-value=1.1e-13 Score=137.63 Aligned_cols=133 Identities=26% Similarity=0.313 Sum_probs=104.8
Q ss_pred eeecccccccCCceEEEeeeecCchhHHHHHHHH-HhhhhHHHHHHHHhcCCCCCeeEEeeec-cCcceEEEEecccc-c
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRA-LHDVAFKEIQNLIASDQHPNIVRWYGVE-NDKDFVYLSLERCT-C 485 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~-~~~~~~~Ei~~L~~~l~HpNIVrl~g~~-~~~~~~yLVmE~~~-G 485 (549)
|++.+.||+|+||.||+. ...|+.+|+|.+... ..+.+.+|+..+.. ++|+||+++++++ ......|++|||++ |
T Consensus 8 ~~~~~~lg~g~~~~v~~~-~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~ 85 (256)
T cd05082 8 LKLLQTIGKGEFGDVMLG-DYRGNKVAVKCIKNDATAQAFLAEASVMTQ-LRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 85 (256)
T ss_pred CeeeeeecccCCCeEEEE-EEcCCcEEEEEeCCCchHHHHHHHHHHHHh-CCCCCeeeEEEEEEcCCCceEEEEECCCCC
Confidence 888899999999987663 456888999977643 23356678865554 5999999999975 45567899999997 5
Q ss_pred chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 486 SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 486 sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+|.++++... ...+++..+..++.|+ |+|||+++++||||| +++.+|.++...+.+.+
T Consensus 86 ~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~ 150 (256)
T cd05082 86 SLVDYLRSRG----RSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTK 150 (256)
T ss_pred cHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccce
Confidence 9999987622 2347788888999888 899999999999999 78888887776665543
No 322
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.41 E-value=2.2e-14 Score=146.31 Aligned_cols=131 Identities=24% Similarity=0.302 Sum_probs=106.3
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
.|.....||+|+||.||.. +..++..||||.+... ..+.+.+|+..+.. ++||||+++++.+...+..|++|||+
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~-l~h~~ii~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRD-YHHENVVDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHh-CCCCcHHHHHHheecCCeEEEEEeCC
Confidence 3555678999999998874 5567889999976532 23356688866554 59999999999999999999999999
Q ss_pred cc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 484 TC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 484 ~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+| +|.+++.. +.+++..+..++.|+ |.|||+++|+||||| +++.+|.+.+..+.+.
T Consensus 102 ~~~~L~~~~~~-------~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~ 165 (292)
T cd06658 102 EGGALTDIVTH-------TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFC 165 (292)
T ss_pred CCCcHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcch
Confidence 85 88888754 357888999999998 889999999999999 7888888877766654
No 323
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.41 E-value=6.1e-14 Score=140.88 Aligned_cols=133 Identities=27% Similarity=0.329 Sum_probs=109.2
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCc--ceEEEEe
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDK--DFVYLSL 480 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~--~~~yLVm 480 (549)
|++.+.||.|+||.||+. ...+++.+|+|++.... .....+|+..+..+ +||||+++++++... +..++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKL-RHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCeeeheeeEecCCCCcEEEEe
Confidence 567789999999998884 55568999999887542 23456788665554 899999999999888 8899999
Q ss_pred cccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||++++|.+++... ...+++..++.++.|+ |+|||+.+++|+||| |++.+|.+.+..+++++
T Consensus 80 e~~~~~l~~~~~~~-----~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~ 148 (287)
T cd07840 80 EYMDHDLTGLLDSP-----EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLAR 148 (287)
T ss_pred ccccccHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEcccccee
Confidence 99999999988762 2468899999999998 899999999999999 88999988777666544
No 324
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.41 E-value=3e-14 Score=145.63 Aligned_cols=132 Identities=25% Similarity=0.290 Sum_probs=107.6
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
.|.....||+|+||.||.. +..+++.||+|.+... ..+.+.+|+..+.. ++||||+++++++...+..|++|||+
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~-l~hp~i~~~~~~~~~~~~~~iv~e~~ 100 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRD-YQHQNVVEMYKSYLVGEELWVLMEFL 100 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHh-CCCCchhhhhhheeeCCeEEEEEecC
Confidence 3556678999999998874 5667899999987532 23356678865554 49999999999999999999999999
Q ss_pred c-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 484 T-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 484 ~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+ ++|.+++.. ..+++..++.++.|+ |.|||+++++||||| |++.+|.+++..+.+++
T Consensus 101 ~~~~L~~~~~~-------~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~ 165 (297)
T cd06659 101 QGGALTDIVSQ-------TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCA 165 (297)
T ss_pred CCCCHHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHh
Confidence 8 588887654 357888999999998 889999999999999 88999988888777654
No 325
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.41 E-value=6.1e-14 Score=140.83 Aligned_cols=133 Identities=24% Similarity=0.172 Sum_probs=106.2
Q ss_pred eeeecccccccCCceEEEee-----eecCchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccC--cceE
Q 042769 408 LFVSNTEIAKGSNGTVVYEG-----IYEGRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVEND--KDFV 476 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~~-----~~~g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~--~~~~ 476 (549)
.|++.+.||+|+||.||... ..+++.+|||.+.... ...+.+|+..+.. ++||||+++++++.. ....
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~-l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRT-LDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHh-CCCCChheEEeeeecCCCCce
Confidence 37778899999999987742 2347889999887432 3456788866655 499999999999877 5579
Q ss_pred EEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 477 YLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 477 yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+++|||++ ++|.+++.... ..+++..+..++.|+ |+|||+++++||||| |++.++.+.+..+.+.
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~-----~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR-----DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc-----cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 99999997 59999997622 358888899999998 899999999999999 7888887777666544
No 326
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.41 E-value=2.2e-13 Score=136.01 Aligned_cols=123 Identities=22% Similarity=0.226 Sum_probs=94.9
Q ss_pred ccccccCCceEEEe-eee------cCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 413 TEIAKGSNGTVVYE-GIY------EGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~------~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
+.||+|+||.||.. ... .++.+|+|.+... ....+.+|+..+. .++||||+++++++...+..+++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~-~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMS-NFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHH-hcCCCCeeeEeeeecCCCCeEEEEe
Confidence 36999999998763 221 2368999988643 2335667886554 4599999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCC-cccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCC
Q 042769 482 RCT-CSLDDLIQTYSDSS-CNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADG 536 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~-~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G 536 (549)
|++ |+|.+++....... ....+++..+..++.|+ |+|||+++++||||| |++.++
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~ 143 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKG 143 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCC
Confidence 997 59999997643211 22347778888898888 889999999999999 677666
No 327
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.41 E-value=5.6e-14 Score=139.85 Aligned_cols=132 Identities=20% Similarity=0.263 Sum_probs=108.7
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
|+..+.||.|+||.||.. ...+++.+|+|++... ....+.+|+..+..+ +||||+++++++......++++||+
T Consensus 3 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 3 LEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKC-NSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred chHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHC-CCCchhhhheeeecCCEEEEEEEec
Confidence 778889999999998884 5567899999977643 233567888666555 7999999999999999999999999
Q ss_pred c-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccc-eeEEEeecc----ccccCCCCchhhhhhh
Q 042769 484 T-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDS-VKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 484 ~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~-~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
. ++|.+++.... ..+++..+..++.|+ |.|||+ .+++||||| +++.+|......+.++
T Consensus 82 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~ 148 (265)
T cd06605 82 DGGSLDKILKEVQ-----GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVS 148 (265)
T ss_pred CCCcHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 8 59999998721 568888889999998 889999 999999999 7888887766655543
No 328
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.41 E-value=1.4e-13 Score=159.12 Aligned_cols=123 Identities=18% Similarity=0.190 Sum_probs=97.8
Q ss_pred cceeeeeecccccccCCceEEE-eeeecCchhHHHHHHH-----HHhhhhHHHHHHHHhcCCCCCeeEEeeeccC--cce
Q 042769 404 NVGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVR-----ALHDVAFKEIQNLIASDQHPNIVRWYGVEND--KDF 475 (549)
Q Consensus 404 ~igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~-----~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~--~~~ 475 (549)
.+.+ |++.+.||+|+||+||+ ....+++.+|+|.+.. .....+..|+..|.. ++|||||+++++|.. ...
T Consensus 11 ~l~~-YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~-L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 11 RLNE-YEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRE-LKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccCC-EEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHH-cCCCCcCeEEEEEEecCCCE
Confidence 3444 99999999999999988 4667788999987653 223456789866555 599999999998754 457
Q ss_pred EEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccce-------eEEEeecc
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSV-------KVIIRDLS 530 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~-------~IIHRDLK 530 (549)
+|||||||. |+|.++|..+.. ....+++..++.++.|| |.|||.. +|||||||
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~--~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLK 152 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYK--MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLK 152 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCc
Confidence 999999998 599999976321 13468999999999999 8999984 49999999
No 329
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.40 E-value=1.3e-13 Score=136.25 Aligned_cols=128 Identities=24% Similarity=0.254 Sum_probs=102.3
Q ss_pred ccccccCCceEEEeeeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-cch
Q 042769 413 TEIAKGSNGTVVYEGIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-CSL 487 (549)
Q Consensus 413 ~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-GsL 487 (549)
++||+|+||.||......++.||+|++... ....+.+|+..+. .++||||+++++++......+++|||+. ++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~-~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILK-QYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHH-hCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 479999999988754444899999987643 2335667886554 4599999999999999999999999997 599
Q ss_pred hhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 488 DDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 488 ~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
.+++... ...+++..+..++.|+ |.|||+++++||||| |++.++..++..+.+.
T Consensus 80 ~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~ 140 (251)
T cd05041 80 LTFLRKK-----KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMS 140 (251)
T ss_pred HHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeecccc
Confidence 9998762 2356777888888887 889999999999999 8888887777666544
No 330
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.40 E-value=7.7e-14 Score=140.90 Aligned_cols=139 Identities=22% Similarity=0.204 Sum_probs=108.0
Q ss_pred eeeecccccccCCceEEEee------eecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEE
Q 042769 408 LFVSNTEIAKGSNGTVVYEG------IYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYL 478 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~~------~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yL 478 (549)
.|...++||+|+||.||... ..++..+|+|.+... ....+.+|++.+.. ++|+||+++++++......++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTV-LQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhc-CCCCCCceEEEEEecCCceEE
Confidence 37778999999999988742 224567888876532 23457788865554 499999999999999999999
Q ss_pred Eecccc-cchhhhhhhcccC---------CcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchh
Q 042769 479 SLERCT-CSLDDLIQTYSDS---------SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPL 541 (549)
Q Consensus 479 VmE~~~-GsL~~~L~~~~~~---------~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~ 541 (549)
+|||+. |+|.+++..+... .....+++..+..++.|+ |+|||+++++||||| |++.++.+...
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~ 164 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIG 164 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEEC
Confidence 999997 6999999864311 011347888889999998 889999999999999 78888888777
Q ss_pred hhhhhh
Q 042769 542 LLSLMR 547 (549)
Q Consensus 542 l~~Lmr 547 (549)
.+++.+
T Consensus 165 dfg~~~ 170 (280)
T cd05092 165 DFGMSR 170 (280)
T ss_pred CCCcee
Confidence 766654
No 331
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.40 E-value=9.5e-14 Score=139.64 Aligned_cols=128 Identities=13% Similarity=0.087 Sum_probs=98.8
Q ss_pred eeeccc--ccccCCceEEEe-eeecCchhHHHHHHHHHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 409 FVSNTE--IAKGSNGTVVYE-GIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 409 y~~~~~--LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
|++.+. ||+|+||.||.. ...+++.+|+|.+........ |+.......+||||+++++++...+..|+||||++
T Consensus 16 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~ 93 (267)
T PHA03390 16 CEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI--EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKD 93 (267)
T ss_pred hccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh--hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCC
Confidence 555444 599999999884 667789999998775432222 22222222379999999999999999999999997
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCC-CCchhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADG-HPSPLLLS 544 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G-~p~~~l~~ 544 (549)
|+|.+++.. ...+++..+..++.|+ |.|||+.+++||||| +++.++ ......+.
T Consensus 94 ~~L~~~l~~------~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg 155 (267)
T PHA03390 94 GDLFDLLKK------EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYG 155 (267)
T ss_pred CcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCc
Confidence 599999977 3478999999999999 889999999999999 777776 54444433
No 332
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.40 E-value=1.3e-13 Score=139.75 Aligned_cols=138 Identities=23% Similarity=0.331 Sum_probs=107.8
Q ss_pred eeeeecccccccCCceEEEe-eeecCchhHHHHHHHH--HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc-----ceEEE
Q 042769 407 KLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA--LHDVAFKEIQNLIASDQHPNIVRWYGVENDK-----DFVYL 478 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~-----~~~yL 478 (549)
+.|.+.+.||+|+||.||.. ...+++.+|+|.+... ......+|+..+.++.+||||+++++++... ...|+
T Consensus 22 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~l 101 (291)
T cd06639 22 DTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWL 101 (291)
T ss_pred CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEE
Confidence 34999999999999998874 5567899999987642 2234567887776666899999999998643 35899
Q ss_pred Eecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 479 SLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 479 VmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
||||++ |+|.++++... .....+++..++.++.|+ |+|||+++++||||| +++.+|.+.+..+.+.
T Consensus 102 v~ey~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~ 175 (291)
T cd06639 102 VLELCNGGSVTELVKGLL--ICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVS 175 (291)
T ss_pred EEEECCCCcHHHHHHHhh--hcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccc
Confidence 999997 59999886421 113468888999999998 889999999999999 7788887766655543
No 333
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.40 E-value=1.1e-13 Score=138.52 Aligned_cols=129 Identities=19% Similarity=0.232 Sum_probs=100.9
Q ss_pred cccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-cc
Q 042769 412 NTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-CS 486 (549)
Q Consensus 412 ~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-Gs 486 (549)
...||+|+||.||.. ...+++.||+|.+... ..+.+.+|+..+ +.++|+||+++++++...+..++++||+. ++
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 91 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALH-SYLKHRNIVQYLGSDSENGFFKIFMEQVPGGS 91 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHH-HhcCCCCeeeeeeeeccCCEEEEEEecCCCCC
Confidence 358999999998774 4567888999976642 233566888655 44599999999999999999999999997 59
Q ss_pred hhhhhhhcccCCccccc--CchhhhHHhhhe---eecccceeEEEeecc----cccc-CCCCchhhhhhh
Q 042769 487 LDDLIQTYSDSSCNSVF--GEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKA-DGHPSPLLLSLM 546 (549)
Q Consensus 487 L~~~L~~~~~~~~~~~l--~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~-~G~p~~~l~~Lm 546 (549)
|.+++.... ..+ ++..+..++.|+ |.|||+++|+||||| +++. ++.+.+..+.++
T Consensus 92 L~~~l~~~~-----~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~ 156 (268)
T cd06624 92 LSALLRSKW-----GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTS 156 (268)
T ss_pred HHHHHHHhc-----ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhh
Confidence 999997621 234 677778888888 889999999999999 6655 566666665554
No 334
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=99.40 E-value=2.6e-13 Score=154.39 Aligned_cols=148 Identities=17% Similarity=0.227 Sum_probs=106.9
Q ss_pred CceeccCCCccc------cccccceeeeeccccccccccceeeecCCcchhhhccc-cccccCCcchhhhhh--------
Q 042769 1 VSWTFGTGTPIY------SSYQAPVQATVDQDNASELTNSFFIDCGEDWGLYAHGL-LGRMKLPQSIDDYVK-------- 65 (549)
Q Consensus 1 ~~W~f~tg~~i~------ss~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~~v~-------- 65 (549)
+.|+|+||+... ..+|+ .|.+..+.+|.|+.++.|||+|+ +|+++|.|+....+.
T Consensus 166 ~aWt~~tGd~~~~~~~~~~~~e~----------TPlvvgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~c 235 (764)
T TIGR03074 166 VAWTYHTGDLKTPDDPGEATFQA----------TPLKVGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTC 235 (764)
T ss_pred EEEEEECCCcccccccccccccc----------CCEEECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccc
Confidence 469999997542 12222 28888889999999999999999 999999999865432
Q ss_pred ------------------cCCCcccccceeecceeeEEEEEEccccceeeecCCCCCCccccchhhhcccccccccchHH
Q 042769 66 ------------------TAPHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEEQKSASYKHDKVNNEQ 127 (549)
Q Consensus 66 ------------------~sP~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (549)
++|.+. ++.||+|+-|+.+|||||+||+++|+|...+.-+ +.. +..+
T Consensus 236 RGvay~~~p~~~~~~~~~~~p~~~-~~rV~~~T~Dg~LiALDA~TGk~~W~fg~~G~vd--l~~------------~~g~ 300 (764)
T TIGR03074 236 RGVSYYDAPAAAAGPAAPAAPADC-ARRIILPTSDARLIALDADTGKLCEDFGNNGTVD--LTA------------GMGT 300 (764)
T ss_pred cceEEecCCccccccccccccccc-CCEEEEecCCCeEEEEECCCCCEEEEecCCCcee--eec------------ccCc
Confidence 346666 7899999999999999999999999998754110 000 0000
Q ss_pred HHh--hccCccccccccCceEEEEEcc----------cceeecccCCCCCceeeeeeehhh
Q 042769 128 LVK--SGLTNTAELQHKEPYLLFITRT----------DYTLQSFEPNSDNVSWSMTVAEIG 176 (549)
Q Consensus 128 ~~~--~~~~~~~~~~~~~~~~v~i~r~----------d~~l~a~d~~~g~~~Wn~~~~~~~ 176 (549)
.-. -..++++.+. .++||||.. ++.|+|+|++||+++|++..+.-.
T Consensus 301 ~~~g~~~~ts~P~V~---~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~~~g~p~ 358 (764)
T TIGR03074 301 TPPGYYYPTSPPLVA---GTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAWDPGNPD 358 (764)
T ss_pred CCCcccccccCCEEE---CCEEEEEecccccccccCCCcEEEEEECCCCcEeeEEecCCCC
Confidence 000 0113344432 379999964 689999999999999999987433
No 335
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.40 E-value=7.6e-14 Score=140.07 Aligned_cols=132 Identities=24% Similarity=0.232 Sum_probs=108.6
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
+|++.+.||.|+||.||.. ...+++.||+|.+... ....+.+|+..+.. ++||||+++++++......|+++||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQ-CRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHH-cCCCCeeeeeEEEEECCeEEEEEEe
Confidence 3788899999999998874 5567899999977643 22345678865544 4899999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+. ++|.+++.. ..+++..+..++.|+ |.|||+++++||||+ +++.+|.+....+.+.+
T Consensus 81 ~~~~~L~~~~~~-------~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 146 (274)
T cd06609 81 CGGGSCLDLLKP-------GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSG 146 (274)
T ss_pred eCCCcHHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccce
Confidence 97 599999876 268889999999998 889999999999999 88888887777665543
No 336
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.40 E-value=8.2e-14 Score=141.01 Aligned_cols=133 Identities=22% Similarity=0.195 Sum_probs=107.0
Q ss_pred eeecccccccCCceEEEee----eecCchhHHHHHHHH-------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEE
Q 042769 409 FVSNTEIAKGSNGTVVYEG----IYEGRPVAVKRLVRA-------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVY 477 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~----~~~g~~VAVK~i~~~-------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~y 477 (549)
|++.+.||+|+||.||+.. ..+++.||||.+.+. ......+|+..+.+..+||||+++++++......|
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 7788899999999988732 245788999876532 12345678877777657999999999999999999
Q ss_pred EEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 478 LSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+||||+. |+|.+++.. ...+++..++.++.|+ |.|||+.+++||||| |++.+|.+....+.+.+
T Consensus 82 lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 82 LILDYVNGGELFTHLYQ------REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred EEEecCCCCcHHHHHhh------cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccc
Confidence 9999997 599999876 4468888888888888 899999999999999 78888877766665544
No 337
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.40 E-value=1.4e-13 Score=136.86 Aligned_cols=134 Identities=23% Similarity=0.216 Sum_probs=107.4
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
.|++.+.||.|+||+||.. ...++..+|+|++... ....+.+|+..+. .++|+||+++++.+...+..|++||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~-~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMS-QCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHH-hcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 3888999999999998874 3457888999977532 2345667886554 45999999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
++ ++|.++++... ....+++..+..++.|+ |.|||+++++||||| ++++++...+..+.+
T Consensus 81 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~ 148 (267)
T cd06610 81 LSGGSLLDIMKSSY---PRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGV 148 (267)
T ss_pred cCCCcHHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccch
Confidence 97 59999997632 12458888999999998 889999999999999 778887766655544
No 338
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.40 E-value=2.9e-14 Score=154.25 Aligned_cols=133 Identities=26% Similarity=0.333 Sum_probs=108.8
Q ss_pred eeecccccccCCceEEEeeeec---C--chhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYE---G--RPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~---g--~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
..+.++||+|+||. ++++.++ | -.||||+++.. ....+++|+..|.++ +|||+|||||+..+ ..+.||
T Consensus 112 i~l~e~LG~GsFgv-V~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L-~H~hliRLyGvVl~-qp~mMV 188 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGV-VKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKL-QHPHLIRLYGVVLD-QPAMMV 188 (1039)
T ss_pred HHHHHHhcCcceee-EeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhc-cCcceeEEeeeecc-chhhHH
Confidence 56678999999995 6655544 3 36899988743 355789999777666 99999999999987 677899
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhhc
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRL 548 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd 548 (549)
||+|+ |+|.+.|++.. ...|.......|+.|| |+||..+++|||||- |+-.--..++.+++|||-
T Consensus 189 ~ELaplGSLldrLrka~----~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRa 261 (1039)
T KOG0199|consen 189 FELAPLGSLLDRLRKAK----KAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRA 261 (1039)
T ss_pred hhhcccchHHHHHhhcc----ccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceec
Confidence 99998 79999998832 5567778888999999 999999999999998 666666677779999984
No 339
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.39 E-value=1.4e-13 Score=139.09 Aligned_cols=138 Identities=22% Similarity=0.283 Sum_probs=107.4
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
|+..+.||+|+||.||. ....+++.+|+|.+... ....+.+|+..+.+..+||||+++++++......+++|||+
T Consensus 6 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~ 85 (288)
T cd06616 6 LKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM 85 (288)
T ss_pred hHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc
Confidence 56678999999999887 46677899999987653 23356678877777756999999999999999999999999
Q ss_pred ccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccc-eeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 484 TCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDS-VKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 484 ~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~-~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
.++|.++...... .....+++..+..++.|+ |+|||+ .+++||||| |++.+|.+++..+.+.+
T Consensus 86 ~~~l~~l~~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 156 (288)
T cd06616 86 DISLDKFYKYVYE-VLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISG 156 (288)
T ss_pred cCCHHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhH
Confidence 8766554332100 113568888999999988 889997 599999999 88888888877776654
No 340
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.39 E-value=1.6e-13 Score=138.08 Aligned_cols=140 Identities=16% Similarity=0.127 Sum_probs=107.7
Q ss_pred eeeeecccccccCCceEEEeeeec-----CchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccC-cceE
Q 042769 407 KLFVSNTEIAKGSNGTVVYEGIYE-----GRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVEND-KDFV 476 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~~~~~-----g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~-~~~~ 476 (549)
+.|++.+.||+|+||.||+..... +..||+|++... ....+.+|+..+..+ +||||+++++++.. ....
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGL-SHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCCCC
Confidence 448899999999999988743222 678899877632 233466788665555 99999999998665 5678
Q ss_pred EEEecccc-cchhhhhhhcccC--CcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 477 YLSLERCT-CSLDDLIQTYSDS--SCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 477 yLVmE~~~-GsL~~~L~~~~~~--~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
++++||+. |+|.+++...... .....+++..+..++.|+ |+|||+++++||||| |++.++.+++..+.+.
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~ 164 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALS 164 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCc
Confidence 99999997 6999999764321 112458888999999998 899999999999999 7888888877766665
Q ss_pred h
Q 042769 547 R 547 (549)
Q Consensus 547 r 547 (549)
|
T Consensus 165 ~ 165 (280)
T cd05043 165 R 165 (280)
T ss_pred c
Confidence 4
No 341
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.39 E-value=1.1e-13 Score=141.14 Aligned_cols=131 Identities=26% Similarity=0.346 Sum_probs=105.8
Q ss_pred eeeeecccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 407 KLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
+.|.+.+.||+|+||.||.. ...+++.||+|.+... ..+.+.+|+..+.. ++||||+++++++...+..|+|+||
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~-l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRE-NKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhh-cCCCCeeehhheeeeCCcEEEEEec
Confidence 34889999999999998774 5567889999977532 23356678865544 5999999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
++ ++|.+++.+ ..+++..+..++.|+ |.|||+++++||||| +++.+|.+....+.+
T Consensus 98 ~~~~~L~~~~~~-------~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~ 161 (293)
T cd06647 98 LAGGSLTDVVTE-------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGF 161 (293)
T ss_pred CCCCcHHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcc
Confidence 97 599999865 347788888888888 889999999999999 777777766665543
No 342
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.39 E-value=1.4e-13 Score=138.78 Aligned_cols=138 Identities=22% Similarity=0.229 Sum_probs=105.6
Q ss_pred eeecccccccCCceEEEeee------ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEE
Q 042769 409 FVSNTEIAKGSNGTVVYEGI------YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYL 478 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~------~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yL 478 (549)
|.+.+.||+|+||.||.... ..++.||+|++... ....+.+|+. +...++||||+++++++......++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~-~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAM-MRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHH-HHhcCCCCCcCeEEEEEcCCCceEE
Confidence 77789999999999887422 23578999988743 1234556774 4455699999999999999999999
Q ss_pred Eecccc-cchhhhhhhccc----------CCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCch
Q 042769 479 SLERCT-CSLDDLIQTYSD----------SSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSP 540 (549)
Q Consensus 479 VmE~~~-GsL~~~L~~~~~----------~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~ 540 (549)
++||+. ++|.+++..... ......+++..+..++.|+ |+|||+++|+||||| |++.++..+.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl 165 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKI 165 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEe
Confidence 999997 599999853210 0112347777888889998 899999999999999 7888888877
Q ss_pred hhhhhhh
Q 042769 541 LLLSLMR 547 (549)
Q Consensus 541 ~l~~Lmr 547 (549)
..+++.|
T Consensus 166 ~Dfg~~~ 172 (283)
T cd05091 166 SDLGLFR 172 (283)
T ss_pred ccccccc
Confidence 7776654
No 343
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.39 E-value=1.2e-13 Score=137.62 Aligned_cols=125 Identities=24% Similarity=0.320 Sum_probs=101.8
Q ss_pred ccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-cc
Q 042769 415 IAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-CS 486 (549)
Q Consensus 415 LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-Gs 486 (549)
||.|+||.||.. ...+++.+|+|.+.+. ..+.+.+|+..+.. ++||||+++++.+.+....|++|||+. ++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEE-CNHPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHh-CCCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 799999998874 5556899999977643 22356678865544 499999999999999999999999997 59
Q ss_pred hhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 487 LDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 487 L~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|.+++.+ ...+++..+..++.|+ |.|||+++++|+||+ +++.+|.+.+..+.+.
T Consensus 80 L~~~l~~------~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~ 140 (262)
T cd05572 80 LWTILRD------RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFA 140 (262)
T ss_pred HHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcc
Confidence 9999977 3458888888898888 889999999999999 7888887776665543
No 344
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.39 E-value=7.7e-14 Score=165.01 Aligned_cols=121 Identities=22% Similarity=0.316 Sum_probs=97.7
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-cc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-CS 486 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-Gs 486 (549)
+...++||+|+||.||+. ...+++.||||++.... .....|++.+.+ ++|||||+++++|...+..|+|||||+ |+
T Consensus 692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~l~~-l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~ 769 (968)
T PLN00113 692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVN-SIPSSEIADMGK-LQHPNIVKLIGLCRSEKGAYLIHEYIEGKN 769 (968)
T ss_pred CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCc-cccHHHHHHHhh-CCCCCcceEEEEEEcCCCCEEEEeCCCCCc
Confidence 455678999999998874 45789999999886432 223456655544 499999999999999999999999997 69
Q ss_pred hhhhhhhcccCCcccccCchhhhHHhhhe---eeccc---ceeEEEeecc----ccccCCCCch
Q 042769 487 LDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLD---SVKVIIRDLS----LWKADGHPSP 540 (549)
Q Consensus 487 L~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH---~~~IIHRDLK----Ll~~~G~p~~ 540 (549)
|.++++. +++..+..++.|+ |+||| +.+|+||||| |++.++.+..
T Consensus 770 L~~~l~~---------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~ 824 (968)
T PLN00113 770 LSEVLRN---------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL 824 (968)
T ss_pred HHHHHhc---------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEE
Confidence 9999864 6778888999988 89999 6799999999 7777776653
No 345
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.39 E-value=8.9e-14 Score=138.59 Aligned_cols=137 Identities=24% Similarity=0.289 Sum_probs=108.2
Q ss_pred eeeeecccccccCCceEEEe-eeecCchhHHHHHHHH--HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcc------eEE
Q 042769 407 KLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA--LHDVAFKEIQNLIASDQHPNIVRWYGVENDKD------FVY 477 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~------~~y 477 (549)
+.|++.+.||+|+||.||.. ...+++.+|+|++... ..+.+.+|+..+.+..+|+||+++++++.... ..|
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLW 85 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEE
Confidence 34999999999999998874 5567889999977642 23456788877777668999999999986544 489
Q ss_pred EEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 478 LSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
++|||+. ++|.+++.... .....+++..+..++.|+ |.|||+++++||||+ +++.+|.+....+.+
T Consensus 86 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 86 LVMELCGGGSVTDLVKGLR--KKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEcCCCCcHHHHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCcc
Confidence 9999998 49999887522 113468889999999988 899999999999999 778888776655543
No 346
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.39 E-value=2.2e-13 Score=136.45 Aligned_cols=131 Identities=19% Similarity=0.178 Sum_probs=101.6
Q ss_pred eeecccccccCCceEEEeee-ec---CchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 409 FVSNTEIAKGSNGTVVYEGI-YE---GRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~-~~---g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
|.+.+.||+|+||.||.+.. .. ...||+|..... ..+.+.+|+..+..+ +||||+++++++.+ ...|++|
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~~~~lv~ 85 (270)
T cd05056 8 ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF-DHPHIVKLIGVITE-NPVWIVM 85 (270)
T ss_pred ceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhC-CCCchhceeEEEcC-CCcEEEE
Confidence 77889999999999887422 22 346888876632 234566788655544 99999999999875 4578999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
||++ |+|.+++... ...+++..+..++.|+ |+|||+++++||||| |++.+|.+....+++.
T Consensus 86 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~ 154 (270)
T cd05056 86 ELAPLGELRSYLQVN-----KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLS 154 (270)
T ss_pred EcCCCCcHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCcee
Confidence 9997 6999999762 2357888889999888 899999999999999 7888887766665544
No 347
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.39 E-value=3.9e-13 Score=142.69 Aligned_cols=137 Identities=16% Similarity=0.176 Sum_probs=111.1
Q ss_pred eeeeeecccccccCCceEEEeeeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 406 GKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
++.|++.+.||+|+.+.||+.-..+.+.+|+|++... ..+.+..|+..|.++.+|.+||+|+++...++++||||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 5669999999999999988866667788998877743 23356789988888889999999999999999999999
Q ss_pred cccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc---ccccCCCCchhhhhhhh
Q 042769 481 ERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS---LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK---Ll~~~G~p~~~l~~Lmr 547 (549)
||-+.||.++|++.. ..++.-.++.+..|+ +.++|+.||||.||| ++--.|.-++.+++.+.
T Consensus 440 E~Gd~DL~kiL~k~~-----~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~ 507 (677)
T KOG0596|consen 440 ECGDIDLNKILKKKK-----SIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIAN 507 (677)
T ss_pred ecccccHHHHHHhcc-----CCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhc
Confidence 999999999998833 222223666666666 779999999999999 66677777777766553
No 348
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.38 E-value=1.1e-13 Score=136.70 Aligned_cols=123 Identities=21% Similarity=0.278 Sum_probs=100.1
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|+..+.||+|+||.||. .+..+++.+|+|.+... ....+.+|+..+.. ++||||+++++.+...+..++||||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKL-LSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhh-CCCCchhheeeeEecCCEEEEEEec
Confidence 78889999999999887 46678899999976542 23356678866555 4999999999999999999999999
Q ss_pred ccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCC
Q 042769 483 CTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADG 536 (549)
Q Consensus 483 ~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G 536 (549)
++| +|.+++.... ...+++..+..++.|+ |.|||+++++||||| +++.++
T Consensus 81 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~ 138 (256)
T cd08220 81 APGGTLAEYIQKRC----NSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHK 138 (256)
T ss_pred CCCCCHHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence 985 9999997632 3357888889998888 889999999999999 665444
No 349
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.38 E-value=7.9e-14 Score=142.09 Aligned_cols=134 Identities=23% Similarity=0.287 Sum_probs=107.2
Q ss_pred eeeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCc--------
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDK-------- 473 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~-------- 473 (549)
.|.+.+.||+|+||.||.. ...+++.+|+|++.... .....+|++.+..+ +||||+++++++...
T Consensus 9 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~ 87 (311)
T cd07866 9 DYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKL-KHPNVVPLIDMAVERPDKSKRKR 87 (311)
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhc-CCCCccchhhheecccccccccC
Confidence 3999999999999998874 56678999999775321 12456788766554 999999999886433
Q ss_pred ceEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 474 DFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 474 ~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
..+|++|||+.++|...+... ...+++..+..++.|+ |.|||+++|+||||| |++++|.+....+.+.
T Consensus 88 ~~~~lv~~~~~~~l~~~~~~~-----~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 162 (311)
T cd07866 88 GSVYMVTPYMDHDLSGLLENP-----SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLA 162 (311)
T ss_pred ceEEEEEecCCcCHHHHHhcc-----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccc
Confidence 357999999998888887651 3468999999999999 889999999999999 8889998877766655
Q ss_pred h
Q 042769 547 R 547 (549)
Q Consensus 547 r 547 (549)
+
T Consensus 163 ~ 163 (311)
T cd07866 163 R 163 (311)
T ss_pred h
Confidence 4
No 350
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.38 E-value=2.4e-13 Score=135.20 Aligned_cols=127 Identities=22% Similarity=0.239 Sum_probs=99.7
Q ss_pred ccccccCCceEEEe-eeec---CchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc
Q 042769 413 TEIAKGSNGTVVYE-GIYE---GRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~-~~~~---g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~ 484 (549)
++||+|+||.||++ ...+ +..+|+|.+.... .+.+.+|+..+.. +.||||+++++++.. ...+++|||+.
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQ-LDHPCIVRLIGVCKG-EPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHh-cCCCCeeeEEEEEcC-CceEEEEEeCC
Confidence 47999999998763 2222 3789999877432 2356678866655 499999999998864 46799999997
Q ss_pred -cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 -CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 -GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.+++.. ...+++..+..++.|+ |+|||..+++||||| |++.+|..+...+.+.+
T Consensus 79 ~~~L~~~l~~------~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~ 143 (257)
T cd05060 79 LGPLLKYLKK------RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSR 143 (257)
T ss_pred CCcHHHHHHh------CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccc
Confidence 699999987 3468889999999998 889999999999999 78888877776665443
No 351
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.38 E-value=3.7e-13 Score=134.53 Aligned_cols=136 Identities=18% Similarity=0.246 Sum_probs=106.1
Q ss_pred eeecccccccCCceEEEe-eee-cCchhHHHHHHHH-------------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIY-EGRPVAVKRLVRA-------------LHDVAFKEIQNLIASDQHPNIVRWYGVENDK 473 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~-~g~~VAVK~i~~~-------------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~ 473 (549)
|++.+.||+|+||.||.. ... .++.+|+|.+... ......+|+..+.+.++||||+++++++...
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 778889999999998874 333 4688999976521 1223556776676677999999999999999
Q ss_pred ceEEEEeccccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccc-eeEEEeecc----ccccCCCCchhhhh
Q 042769 474 DFVYLSLERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDS-VKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 474 ~~~yLVmE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~-~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
+..+++|||+.| +|.+++.... .....+++..++.++.|+ |.|||+ .+++||||| |++.+|.+....+.
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg 159 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLK--EKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFG 159 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHH--hccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEeccc
Confidence 999999999985 9988886422 123458888899999998 889995 789999999 78888877776665
Q ss_pred hh
Q 042769 545 LM 546 (549)
Q Consensus 545 Lm 546 (549)
++
T Consensus 160 ~~ 161 (269)
T cd08528 160 LA 161 (269)
T ss_pred ce
Confidence 44
No 352
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.38 E-value=1.5e-13 Score=135.24 Aligned_cols=131 Identities=26% Similarity=0.319 Sum_probs=107.6
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|++.+.||+|++|.||.. ...+++.||+|.+... ..+.+.+|++.+.++ +|||++++++++......+++|||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhC-CCCCccEEEEEEEeCCEEEEEEec
Confidence 778899999999998884 5567889999977643 233566788665555 999999999999999999999999
Q ss_pred ccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 483 CTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 483 ~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+.+ +|.+++.. ...+++..+..++.|+ |.|||+++++||||| +++.+|......+.++
T Consensus 81 ~~~~~L~~~~~~------~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 81 AENGSLRQIIKK------FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred CCCCcHHHHHHh------ccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccc
Confidence 985 99999877 3568899999999998 889999999999999 7777777666655544
No 353
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.38 E-value=9.7e-14 Score=143.40 Aligned_cols=130 Identities=23% Similarity=0.273 Sum_probs=108.3
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcc-----eEE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKD-----FVY 477 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~-----~~y 477 (549)
|++.+.||.|+||.||+. ...+++.||+|++... ..+.+.+|+..+..+ +||||+++++++.... ..|
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHL-RHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhc-CCcchhhhhhhhcccCcccccceE
Confidence 788899999999998884 5566899999977643 233566788666555 8999999999988775 789
Q ss_pred EEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 478 LSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 478 LVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
++|||++++|.+++.. ...+++..++.++.|+ |.|||+++|+||||| |++.+|.+.+..+.+
T Consensus 81 lv~e~~~~~l~~~l~~------~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~ 149 (330)
T cd07834 81 IVTELMETDLHKVIKS------PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGL 149 (330)
T ss_pred EEecchhhhHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCc
Confidence 9999999999999876 4478899999999998 889999999999999 888888877765554
No 354
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.38 E-value=1.9e-13 Score=138.17 Aligned_cols=135 Identities=26% Similarity=0.310 Sum_probs=110.0
Q ss_pred ceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHHH--hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 405 VGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL--HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~--~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
..+.|+..+.||+|+||.||.. ...+++.+|+|.+.... ...+.+|++.+.. ++|+||+++++++......|+++|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKD-CKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHH-CCCCCeeEEEEEEEECCEEEEEEe
Confidence 3444888899999999998773 44468899999776432 3456788865544 499999999999999999999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
|++ ++|.+++..+. ..++...+..++.|+ |.|||+.+++|+||+ +++.+|.++...+.+
T Consensus 96 ~~~~~~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~ 162 (286)
T cd06614 96 YMDGGSLTDIITQNF-----VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGF 162 (286)
T ss_pred ccCCCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccch
Confidence 998 59999998721 268888999999998 899999999999999 788888877665544
No 355
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.38 E-value=8.4e-14 Score=137.81 Aligned_cols=124 Identities=29% Similarity=0.331 Sum_probs=101.3
Q ss_pred ccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-cc
Q 042769 415 IAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-CS 486 (549)
Q Consensus 415 LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-Gs 486 (549)
||+|+||.||.. ...+|+.+|+|.+... ......+|+..+... +||||+++++++......|++|||+. ++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-QSPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC-CCcchhHHHHheecCcEEEEEEecCCCCc
Confidence 689999998884 5556899999977643 233566777555444 89999999999999999999999997 59
Q ss_pred hhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 487 LDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 487 L~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
|.+++.+ ...+++..+..++.|+ |+|||+++++||||+ +++.+|......+++
T Consensus 80 L~~~l~~------~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~ 139 (265)
T cd05579 80 LASLLEN------VGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGL 139 (265)
T ss_pred HHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEeccc
Confidence 9999977 3468899999999999 889999999999999 788888776655544
No 356
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.38 E-value=1.1e-13 Score=145.66 Aligned_cols=126 Identities=19% Similarity=0.152 Sum_probs=90.5
Q ss_pred cceeeeeecccccccCCceEEEe-eee-cCchhHHHHHHHH--------HhhhhHHHHHHHHhcCCCCCeeE-EeeeccC
Q 042769 404 NVGKLFVSNTEIAKGSNGTVVYE-GIY-EGRPVAVKRLVRA--------LHDVAFKEIQNLIASDQHPNIVR-WYGVEND 472 (549)
Q Consensus 404 ~igk~y~~~~~LG~G~fG~V~~~-~~~-~g~~VAVK~i~~~--------~~~~~~~Ei~~L~~~l~HpNIVr-l~g~~~~ 472 (549)
.+...|.+.+.||+|+||+||++ ... +++.+|||++... ....+.+|++.|..+ +|+||+. ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L-~h~~iv~~l~~~--- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV-RGIGVVPQLLAT--- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc-cCCCCCcEEEEc---
Confidence 34444999999999999998885 443 5777899875421 233567899766555 9999884 5543
Q ss_pred cceEEEEeccccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeec-c----ccccCCCCchhhh
Q 042769 473 KDFVYLSLERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDL-S----LWKADGHPSPLLL 543 (549)
Q Consensus 473 ~~~~yLVmE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDL-K----Ll~~~G~p~~~l~ 543 (549)
+..|||||||.| +|. .+.. .. . ..++.|+ |.|||+++|+|||| | |++.+|.+.+.++
T Consensus 91 -~~~~LVmE~~~G~~L~-~~~~------~~---~---~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLH-LARP------HG---D---PAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred -CCcEEEEEccCCCCHH-HhCc------cc---h---HHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEEC
Confidence 357999999986 775 2211 11 1 2344444 89999999999999 8 7888888888877
Q ss_pred hhhh
Q 042769 544 SLMR 547 (549)
Q Consensus 544 ~Lmr 547 (549)
.|++
T Consensus 157 GlA~ 160 (365)
T PRK09188 157 QLAS 160 (365)
T ss_pred ccce
Confidence 7765
No 357
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.38 E-value=1.9e-13 Score=137.44 Aligned_cols=133 Identities=26% Similarity=0.315 Sum_probs=104.5
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHh--cCCCCCeeEEeeeccCcce-----
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIA--SDQHPNIVRWYGVENDKDF----- 475 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~--~l~HpNIVrl~g~~~~~~~----- 475 (549)
|++.+.||+|+||.||+. ...+++.||+|++... ......+|+..+.. .++||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999998884 4556899999988632 12234466654433 3379999999999988776
Q ss_pred EEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 476 VYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 476 ~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
.+++|||++++|.+++.... ...+++..++.++.|+ |.|||+++++|+||+ |++.+|..++..+.+
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~----~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCP----KPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred eEEEehhcccCHHHHHHHcc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCc
Confidence 99999999999999887632 2358889999999998 899999999999999 788888777665544
No 358
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=99.37 E-value=4.3e-13 Score=148.18 Aligned_cols=133 Identities=14% Similarity=0.199 Sum_probs=102.7
Q ss_pred CceeccCCCc--cccccccceeeeeccccccccccceeeecCCcchhhhccc-cccccCCcchhh-----------hhhc
Q 042769 1 VSWTFGTGTP--IYSSYQAPVQATVDQDNASELTNSFFIDCGEDWGLYAHGL-LGRMKLPQSIDD-----------YVKT 66 (549)
Q Consensus 1 ~~W~f~tg~~--i~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~-----------~v~~ 66 (549)
+.|+|++|+. +.|+ |.+.++.+|.++.++.|||+|+ +|++.|.|+... .+.+
T Consensus 49 ~~W~~~~g~~~g~~st--------------Pvv~~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~r 114 (527)
T TIGR03075 49 PAWTFSLGKLRGQESQ--------------PLVVDGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNR 114 (527)
T ss_pred EEEEEECCCCCCcccC--------------CEEECCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccc
Confidence 4699999863 4555 8888888888888999999999 999999988742 2345
Q ss_pred CCCcccccceeecceeeEEEEEEccccceeeecCCCCCCccccchhhhcccccccccchHHHHhhccCccccccccCceE
Q 042769 67 APHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYL 146 (549)
Q Consensus 67 sP~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (549)
+|++. +|.||+|+.++.++||||+||+++|++...+... ....++++.+. .++
T Consensus 115 g~av~-~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~-----------------------~~~~tssP~v~---~g~ 167 (527)
T TIGR03075 115 GVALY-DGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKA-----------------------GYTITAAPLVV---KGK 167 (527)
T ss_pred cceEE-CCEEEEEcCCCEEEEEECCCCCEEeecccccccc-----------------------cccccCCcEEE---CCE
Confidence 57777 8899999999999999999999999987743100 00012223321 278
Q ss_pred EEEEcc------cceeecccCCCCCceeeeeeeh
Q 042769 147 LFITRT------DYTLQSFEPNSDNVSWSMTVAE 174 (549)
Q Consensus 147 v~i~r~------d~~l~a~d~~~g~~~Wn~~~~~ 174 (549)
||++.. ++.|+|||++||+++|++.+..
T Consensus 168 Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p 201 (527)
T TIGR03075 168 VITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVP 201 (527)
T ss_pred EEEeecccccCCCcEEEEEECCCCceeEeccCcC
Confidence 999875 7899999999999999998753
No 359
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.37 E-value=8.5e-14 Score=146.19 Aligned_cols=137 Identities=20% Similarity=0.252 Sum_probs=113.4
Q ss_pred ccceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcce
Q 042769 403 RNVGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDF 475 (549)
Q Consensus 403 ~~igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~ 475 (549)
..+.+ ++....||-|+||.|=+ +.......+|+|++++.+ .+....|-++|+.+ +.|.||+||..|.++.+
T Consensus 417 v~l~d-l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~-~s~fIvrLYrTfrd~ky 494 (732)
T KOG0614|consen 417 VKLSD-LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMEC-RSDFIVRLYRTFRDSKY 494 (732)
T ss_pred cchhh-hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhc-CchHHHHHHHHhccchh
Confidence 34444 66778999999999855 333344479999999752 33456777667776 79999999999999999
Q ss_pred EEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+||.||-|- |.|...|++ ++.+.+..++.++..+ ++|||+++||.|||| |++.+|++++++++.++
T Consensus 495 vYmLmEaClGGElWTiLrd------Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAK 568 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRD------RGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAK 568 (732)
T ss_pred hhhhHHhhcCchhhhhhhh------cCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHH
Confidence 999999995 699999998 6789999998888777 789999999999999 89999999999887664
No 360
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.37 E-value=2.3e-13 Score=134.61 Aligned_cols=136 Identities=24% Similarity=0.302 Sum_probs=106.7
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeecc--CcceEEEEe
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVEN--DKDFVYLSL 480 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~--~~~~~yLVm 480 (549)
|++.+.||.|+||.||+ .+..+++.+|+|.+... ..+....|+..+.. ++||||+++++++. .....|++|
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRE-LKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHh-cCCCccceeeeeeecCCCCEEEEEe
Confidence 77889999999999887 46678899999976532 23355678865544 49999999999775 345689999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eeccc-----ceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLD-----SVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH-----~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||++ ++|.+++.... .....+++..++.++.|+ |.||| +.+++||||| +++.+|..+...+.+++
T Consensus 81 e~~~~~~L~~~l~~~~--~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~ 158 (265)
T cd08217 81 EYCEGGDLAQLIQKCK--KERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAK 158 (265)
T ss_pred hhccCCCHHHHHHHHh--hcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccc
Confidence 9997 59999997642 123568888999999988 88999 8999999999 78888887776666544
No 361
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.37 E-value=8.9e-14 Score=150.20 Aligned_cols=111 Identities=23% Similarity=0.307 Sum_probs=94.1
Q ss_pred cccccCCceEEE-eeeecCchhHHHHHHHHH---hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-cchh
Q 042769 414 EIAKGSNGTVVY-EGIYEGRPVAVKRLVRAL---HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-CSLD 488 (549)
Q Consensus 414 ~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~---~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-GsL~ 488 (549)
+||+|.||+||- +++.+...+|||.|.... .+-...|| .|-+.++|.|||+++|++..++++-|.||-++ |+|.
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEI-aLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEI-ALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHH-HHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 799999999877 577888899999888643 23355677 55666699999999999999999999999998 5999
Q ss_pred hhhhhcccCCccccc--CchhhhHHhhhe---eecccceeEEEeecc
Q 042769 489 DLIQTYSDSSCNSVF--GEDQATRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 489 ~~L~~~~~~~~~~~l--~~~~~~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
++|+.. =+++ .+..+..+..|| |.|||++.|||||||
T Consensus 661 sLLrsk-----WGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIK 702 (1226)
T KOG4279|consen 661 SLLRSK-----WGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIK 702 (1226)
T ss_pred HHHHhc-----cCCCccchhHHHHHHHHHHHHhhhhhhcceeecccc
Confidence 999873 2445 777888999999 889999999999999
No 362
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.37 E-value=4.5e-13 Score=140.48 Aligned_cols=139 Identities=19% Similarity=0.149 Sum_probs=111.7
Q ss_pred cccchhhhhhcCcCCccceee-----eeecccccccCCceEEEe-eeecCchhHHHHHHHH--HhhhhHHHHHHHHhcCC
Q 042769 388 PFLDLNKLVRGGAQGRNVGKL-----FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA--LHDVAFKEIQNLIASDQ 459 (549)
Q Consensus 388 ~~~~~~~~~~~~~~~~~igk~-----y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~~l~ 459 (549)
.+++.+....+......||+. |.+.++||.|.|++|+++ +....+.||+|+.+.. ..+.+..||..|.+.-.
T Consensus 54 eqE~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~ 133 (590)
T KOG1290|consen 54 EQEDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVRE 133 (590)
T ss_pred cccChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHh
Confidence 445566666666665566544 668999999999999884 8888999999988743 45677889977665322
Q ss_pred ----C---CCeeEEeeeccC----cceEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eeccc-ceeE
Q 042769 460 ----H---PNIVRWYGVEND----KDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLD-SVKV 524 (549)
Q Consensus 460 ----H---pNIVrl~g~~~~----~~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH-~~~I 524 (549)
| .+||+|++.|.. ..++|||+|++..+|..+|+.+ ..+.++...++.|++|+ |.||| .++|
T Consensus 134 ~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s----~YrGlpl~~VK~I~~qvL~GLdYLH~ecgI 209 (590)
T KOG1290|consen 134 GDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYS----NYRGLPLSCVKEICRQVLTGLDYLHRECGI 209 (590)
T ss_pred cCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHh----CCCCCcHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3 379999999874 4579999999998999999983 36789999999999999 88999 6899
Q ss_pred EEeecc
Q 042769 525 IIRDLS 530 (549)
Q Consensus 525 IHRDLK 530 (549)
||-|||
T Consensus 210 IHTDlK 215 (590)
T KOG1290|consen 210 IHTDLK 215 (590)
T ss_pred cccCCC
Confidence 999999
No 363
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.37 E-value=2.7e-13 Score=138.76 Aligned_cols=132 Identities=25% Similarity=0.283 Sum_probs=101.9
Q ss_pred eeecccccccCCceEEEe-eeecCc----hhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGR----PVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~----~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
|+..+.||+|+||.||.. ...+|+ .+|+|.+.... ...+.+|+..+ +.++||||+++++++... ..+++
T Consensus 9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~-~~l~h~niv~~~~~~~~~-~~~~v 86 (303)
T cd05110 9 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM-ASMDHPHLVRLLGVCLSP-TIQLV 86 (303)
T ss_pred ceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHH-HhCCCCCcccEEEEEcCC-Cceee
Confidence 788899999999998874 444554 46888776431 22455777554 445999999999998764 46789
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+||++ |+|.+++..+ ...+++..+..++.|+ |+|||+++|+||||| |++.++..++..+++.+
T Consensus 87 ~e~~~~g~l~~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 87 TQLMPHGCLLDYVHEH-----KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (303)
T ss_pred ehhcCCCCHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccc
Confidence 99997 7999998762 2357888889999998 899999999999999 77788877776666543
No 364
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.37 E-value=1.3e-13 Score=143.87 Aligned_cols=135 Identities=22% Similarity=0.312 Sum_probs=110.0
Q ss_pred ceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcce---
Q 042769 405 VGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDF--- 475 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~--- 475 (549)
+++.|+..+.||+|+||.||.. ...+++.||||++... ......+|+..+..+ +||||+++++++.....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHM-DHENVIGLLDVFTPASSLED 91 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhccccccc
Confidence 4556999999999999998874 5567899999987532 233456788666554 99999999998876654
Q ss_pred ---EEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 476 ---VYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 476 ---~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
.|+|+||+.++|.+++.. ..+++..+..++.|+ |+|||+++|+||||| +++.+|...+..+.+
T Consensus 92 ~~~~~lv~e~~~~~L~~~~~~-------~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 92 FQDVYLVTHLMGADLNNIVKC-------QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred cccEEEEEecCCCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccc
Confidence 899999998899998865 458899999999998 889999999999999 788888877776665
Q ss_pred hh
Q 042769 546 MR 547 (549)
Q Consensus 546 mr 547 (549)
++
T Consensus 165 ~~ 166 (343)
T cd07851 165 AR 166 (343)
T ss_pred cc
Confidence 54
No 365
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.37 E-value=2.1e-13 Score=134.90 Aligned_cols=124 Identities=20% Similarity=0.352 Sum_probs=101.0
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|.+.+.||+|+||.||. ....+|..+|+|.+... ..+.+.+|++.+.. ++|+||+++++.+......|+++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~-~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAK-MKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHh-CCCCChhhhhheeccCCeEEEEEec
Confidence 78889999999999887 45667889999977643 23356688866544 4999999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCC
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGH 537 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~ 537 (549)
+. ++|.+++.... ...+++..+..++.|+ |.|||+++++||||| +++.++.
T Consensus 81 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~ 139 (257)
T cd08225 81 CDGGDLMKRINRQR----GVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGM 139 (257)
T ss_pred CCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCC
Confidence 97 59999987622 2357888888999888 889999999999999 6666653
No 366
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.37 E-value=1.8e-13 Score=137.37 Aligned_cols=130 Identities=22% Similarity=0.257 Sum_probs=104.5
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcC--CCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASD--QHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l--~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|+..+.||+|+||.||.+ ...+++.||+|.+... ....+.+|+..+..+. .||||+++++++......|++||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 778889999999998884 5577899999987532 2334667776555442 49999999999999999999999
Q ss_pred cccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 482 RCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 482 ~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
|+.| +|.++++. ..+++..+..++.|+ |.|||+.+|+||||+ +++.+|......+.+
T Consensus 83 ~~~~~~L~~~~~~-------~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~ 147 (277)
T cd06917 83 YAEGGSVRTLMKA-------GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGV 147 (277)
T ss_pred cCCCCcHHHHHHc-------cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCc
Confidence 9975 99998865 358888899999888 889999999999999 777777766555443
No 367
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.37 E-value=1.4e-13 Score=141.82 Aligned_cols=135 Identities=24% Similarity=0.304 Sum_probs=106.5
Q ss_pred ceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEE
Q 042769 405 VGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVY 477 (549)
Q Consensus 405 igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~y 477 (549)
+.+.|...+.||+|+||+||.. ...+++.||+|++... ....+.+|+..+..+ +|||++++++++.+....|
T Consensus 19 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 97 (313)
T cd06633 19 PEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPNTIEYKGCYLKEHTAW 97 (313)
T ss_pred HHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEE
Confidence 3344677788999999998874 5567899999977532 123456788665554 9999999999999999999
Q ss_pred EEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 478 LSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 478 LVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
++|||+.|+|.+++... ...+++..+..++.|+ |.|||+++++||||| +++.+|..+...+.+
T Consensus 98 lv~e~~~~~l~~~l~~~-----~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~ 167 (313)
T cd06633 98 LVMEYCLGSASDLLEVH-----KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGS 167 (313)
T ss_pred EEEecCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCC
Confidence 99999999988888652 3457888888898888 889999999999999 777777665554443
No 368
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.37 E-value=2.4e-13 Score=133.52 Aligned_cols=130 Identities=27% Similarity=0.329 Sum_probs=106.4
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCc--ceEEEEe
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDK--DFVYLSL 480 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~--~~~yLVm 480 (549)
|...+.||+|++|.||.. ...+++.|++|.+.... .+.+.+|+..+.++ +||||+++++++... ...++++
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSL-QHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHc-CCCCEeeEEEEEecCCCCeEEEEE
Confidence 677889999999998874 45578999999776542 44566788666554 899999999999988 8899999
Q ss_pred cccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 481 ERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 481 E~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
||++ ++|.+++.. ...+++..+..++.|+ |.|||+.+++|+||+ +++.+|......+..
T Consensus 81 e~~~~~~L~~~~~~------~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~ 147 (260)
T cd06606 81 EYVSGGSLSSLLKK------FGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGC 147 (260)
T ss_pred EecCCCcHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccccc
Confidence 9996 599999987 3378889999999998 889999999999999 777777766655543
No 369
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.36 E-value=2.2e-13 Score=134.46 Aligned_cols=120 Identities=22% Similarity=0.170 Sum_probs=98.3
Q ss_pred cCCceEEE-eeeecCchhHHHHHHHHHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-cchhhhhhhcc
Q 042769 418 GSNGTVVY-EGIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-CSLDDLIQTYS 495 (549)
Q Consensus 418 G~fG~V~~-~~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-GsL~~~L~~~~ 495 (549)
|.||.||. .+..+++.||+|++.... ...+|...+... .||||+++++++...+..|++|||+. |+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-- 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--EYSRERLTIIPH-CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK-- 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--hhhhHHHHHHhc-CCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH--
Confidence 88999888 577889999999987642 223444333333 79999999999999999999999998 599999876
Q ss_pred cCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 496 DSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 496 ~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
...+++..+..++.|+ |+|||+++|+||||| +++.+|..+...+.+.
T Consensus 79 ----~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~ 132 (237)
T cd05576 79 ----FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRW 132 (237)
T ss_pred ----hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccch
Confidence 3458899999999998 899999999999999 8888888777666543
No 370
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.36 E-value=1.6e-13 Score=139.74 Aligned_cols=134 Identities=23% Similarity=0.288 Sum_probs=107.7
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
|++.+.||+|+||.||.. ...+++.||||++... ......+|+..+.....||||+++++++......|++|||+
T Consensus 17 ~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 96 (296)
T cd06618 17 LENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELM 96 (296)
T ss_pred heeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeecc
Confidence 888999999999998874 4456899999987642 22345567766666657999999999999999999999999
Q ss_pred ccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccc-eeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 484 TCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDS-VKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 484 ~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~-~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
.++|.+++... ...+++..+..++.|+ |+|||+ .+|+||||+ |++.+|.+++..+.+.+
T Consensus 97 ~~~l~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~ 163 (296)
T cd06618 97 STCLDKLLKRI-----QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISG 163 (296)
T ss_pred CcCHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccch
Confidence 88887777652 2367888888899998 889997 699999999 78888887777666543
No 371
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.36 E-value=2.2e-13 Score=138.02 Aligned_cols=134 Identities=22% Similarity=0.307 Sum_probs=104.4
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccC--cceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVEND--KDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~--~~~~yLVmE 481 (549)
|+..+.||.|++|.||.. ...+++.+|+|.+... ....+.+|++.+.. ++||||++++++|.. ...+|++||
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKS-CKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHh-CCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 788899999999998874 5567899999977642 23457788866544 599999999998854 346899999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
|++ ++|.+++..... ....+++..+..++.|+ |.|||+.+++||||+ +++.++.+.+..+.+
T Consensus 82 ~~~~~~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 151 (287)
T cd06621 82 YCEGGSLDSIYKKVKK--RGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGV 151 (287)
T ss_pred ecCCCCHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccc
Confidence 997 599888765221 23457888888999988 889999999999999 777777666555544
No 372
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.36 E-value=1.1e-12 Score=141.53 Aligned_cols=134 Identities=24% Similarity=0.217 Sum_probs=101.4
Q ss_pred eeeeeecccccccCCceEEEe-eeecCchhH---HHHHH--H--HHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcce--
Q 042769 406 GKLFVSNTEIAKGSNGTVVYE-GIYEGRPVA---VKRLV--R--ALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDF-- 475 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~~-~~~~g~~VA---VK~i~--~--~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~-- 475 (549)
++......+||+|+|-+||++ +..+|-+|| ||.=. + ...+++..|++. ++.++|||||++|.++.+...
T Consensus 39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~l-LKsL~H~NIirfy~SW~d~~n~~ 117 (632)
T KOG0584|consen 39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHL-LKSLKHPNIIRFYDSWVDTDNKT 117 (632)
T ss_pred CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHH-HccCCCCceeeeeeheecCCCce
Confidence 444556789999999998884 777888888 33211 1 134567789954 555699999999999987654
Q ss_pred EEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccce--eEEEeecc----cc-ccCCCCchhhhh
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSV--KVIIRDLS----LW-KADGHPSPLLLS 544 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~--~IIHRDLK----Ll-~~~G~p~~~l~~ 544 (549)
+.+|+|++. |+|..|++++ +.+....+..+++|| |.|||++ .||||||| ++ -..|..++=+|+
T Consensus 118 in~iTEL~TSGtLr~Y~kk~------~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLG 191 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRKKH------RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLG 191 (632)
T ss_pred eeeeeecccCCcHHHHHHHh------ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchh
Confidence 889999997 8999999994 457778899999999 8899965 69999999 33 344556655555
Q ss_pred hh
Q 042769 545 LM 546 (549)
Q Consensus 545 Lm 546 (549)
|+
T Consensus 192 LA 193 (632)
T KOG0584|consen 192 LA 193 (632)
T ss_pred HH
Confidence 44
No 373
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.36 E-value=1.1e-13 Score=138.79 Aligned_cols=130 Identities=24% Similarity=0.290 Sum_probs=106.2
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|...+.||.|++|.||.. ...+++.+|+|++.... .....+|+..+..+ +|+||+++++++......+++|||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKEL-NHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHh-cCCCcchHHHhhccCCCEEEEEec
Confidence 456678999999998874 55678999999776432 23556788666555 899999999999999999999999
Q ss_pred cccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhh
Q 042769 483 CTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 483 ~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
+.++|.+++... ...+++..+..++.|+ |.|||+.+|+|+||| +++.+|.+....+.
T Consensus 80 ~~~~l~~~l~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~ 143 (283)
T cd05118 80 MDTDLYKLIKDR-----QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFG 143 (283)
T ss_pred cCCCHHHHHHhh-----cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeee
Confidence 999999988762 2468889999999998 889999999999999 78888877665544
No 374
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.36 E-value=1.3e-13 Score=143.82 Aligned_cols=132 Identities=26% Similarity=0.301 Sum_probs=102.5
Q ss_pred eeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCc--------
Q 042769 406 GKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDK-------- 473 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~-------- 473 (549)
+.+|.+.+.||.|+||.||.. ...+|+.||+|.+... ......+|+..+..+ +||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhc-CCCcchhhHhhhccccccccccc
Confidence 455999999999999998874 6677899999977543 233466788766555 999999999876654
Q ss_pred ------ceEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----cccc-CCCCc
Q 042769 474 ------DFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKA-DGHPS 539 (549)
Q Consensus 474 ------~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~-~G~p~ 539 (549)
...|++|||+.++|.+++.. ..+++..++.++.|+ |.|||+.+|+||||| |++. ++.++
T Consensus 83 ~~~~~~~~~~lv~e~~~~~L~~~~~~-------~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~k 155 (342)
T cd07854 83 GSLTELNSVYIVQEYMETDLANVLEQ-------GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLK 155 (342)
T ss_pred ccccccceEEEEeecccccHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEE
Confidence 35799999999999888754 358899999999999 889999999999999 6653 33444
Q ss_pred hhhhhh
Q 042769 540 PLLLSL 545 (549)
Q Consensus 540 ~~l~~L 545 (549)
...+++
T Consensus 156 l~dfg~ 161 (342)
T cd07854 156 IGDFGL 161 (342)
T ss_pred ECCccc
Confidence 444433
No 375
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.35 E-value=1.1e-13 Score=158.48 Aligned_cols=136 Identities=24% Similarity=0.313 Sum_probs=110.5
Q ss_pred CccceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcce
Q 042769 402 GRNVGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDF 475 (549)
Q Consensus 402 ~~~igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~ 475 (549)
...+.-+++-+..||.|.||.||-+ +..+|...|||-++-.. ...+.+|. .+...++|||+|++||+....+.
T Consensus 1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm-~vlE~lnHpNlV~YyGVEvHRek 1308 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEM-KVLEGLNHPNLVRYYGVEVHREK 1308 (1509)
T ss_pred hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHH-HHHHhccCccccccCceeecHHH
Confidence 3455556788889999999999885 77889999999877432 22455666 45567799999999999999999
Q ss_pred EEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhh
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
++|.||||. |+|.++++. .+..++-..+.+..|+ +.|||+.|||||||| |++.+|--+..+++
T Consensus 1309 v~IFMEyC~~GsLa~ll~~------gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFG 1379 (1509)
T KOG4645|consen 1309 VYIFMEYCEGGSLASLLEH------GRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFG 1379 (1509)
T ss_pred HHHHHHHhccCcHHHHHHh------cchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeeccc
Confidence 999999997 699999977 4457777778888888 889999999999999 88888855544443
No 376
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.35 E-value=3.1e-13 Score=135.22 Aligned_cols=137 Identities=20% Similarity=0.152 Sum_probs=100.1
Q ss_pred eeecccccccCCceEEEee----eecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcc-----
Q 042769 409 FVSNTEIAKGSNGTVVYEG----IYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKD----- 474 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~----~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~----- 474 (549)
|.+.+.||+|+||.||... ..+++.||||++... ..+.+.+|+..+. .++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~-~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMK-EFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHh-cCCCCCcceEEEEEccCCCCCcc
Confidence 5667899999999988742 235788999977642 2335668886554 459999999999875432
Q ss_pred -eEEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 475 -FVYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 475 -~~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
..++++||+. |+|.+++...........+++..+..++.|+ |+|||+++|+||||| |++.++......+.+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence 2478899997 6998887542211122347788889999998 899999999999999 777777766555544
Q ss_pred h
Q 042769 546 M 546 (549)
Q Consensus 546 m 546 (549)
.
T Consensus 160 ~ 160 (273)
T cd05074 160 S 160 (273)
T ss_pred c
Confidence 3
No 377
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.35 E-value=3.8e-13 Score=133.37 Aligned_cols=129 Identities=28% Similarity=0.266 Sum_probs=101.5
Q ss_pred ccccccCCceEEEee-ee-cC--chhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc
Q 042769 413 TEIAKGSNGTVVYEG-IY-EG--RPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~~-~~-~g--~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~ 484 (549)
+.||+|+||.||+.. .. .+ ..||+|.+.... .+.+.+|+..+.++ +||||+++++.+.. ...+++|||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSL-DHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhc-CCCCccceeEEEcC-CeEEEEEEecC
Confidence 468999999988742 22 23 368999887542 33566788666555 99999999999988 88999999997
Q ss_pred -cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 -CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 -GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|+|.+++.... ...+++..++.++.|+ |+|||+++++||||| |++.+|..+...+++.+
T Consensus 79 ~~~L~~~l~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~ 145 (257)
T cd05040 79 LGSLLDRLRKDA----LGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMR 145 (257)
T ss_pred CCcHHHHHHhcc----cccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccc
Confidence 69999998732 1457888999999998 899999999999999 78888877777665543
No 378
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.34 E-value=3.7e-13 Score=133.82 Aligned_cols=129 Identities=22% Similarity=0.145 Sum_probs=96.6
Q ss_pred ccccccCCceEEEee-e---ecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeecc-CcceEEEEeccc
Q 042769 413 TEIAKGSNGTVVYEG-I---YEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVEN-DKDFVYLSLERC 483 (549)
Q Consensus 413 ~~LG~G~fG~V~~~~-~---~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~-~~~~~yLVmE~~ 483 (549)
+.||+|+||.||++. . ..+..+|+|++... ....+.+|+..+ +.++||||+++++++. .++..+++|||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIM-KDFSHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHH-ccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence 468999999988742 2 23457999977532 233556787544 5569999999999765 455689999999
Q ss_pred c-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 484 T-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 484 ~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
. |+|.+++... ...+++..+..++.|+ |.|||+++++||||| |++.++.++...+.+.+
T Consensus 80 ~~~~L~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~ 146 (262)
T cd05058 80 KHGDLRNFIRSE-----THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLAR 146 (262)
T ss_pred CCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccc
Confidence 7 6999999762 2335566677788888 899999999999999 88888887776666554
No 379
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.34 E-value=5.5e-13 Score=130.42 Aligned_cols=133 Identities=32% Similarity=0.413 Sum_probs=108.6
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT 484 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~ 484 (549)
|...+.||+|++|.||.. ...+++.+++|++... ......+|+..+.. ++|+||+++++++......++++||++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKK-CKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHh-CCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 778889999999998874 4457889999987654 23456788865544 489999999999999999999999998
Q ss_pred -cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 -CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 -GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
++|.+++... ...+++..+..++.|+ |.|||.++++||||+ +++.+|...+..+.+++
T Consensus 81 ~~~L~~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~ 146 (253)
T cd05122 81 GGSLKDLLKST-----NQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSA 146 (253)
T ss_pred CCcHHHHHhhc-----CCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccc
Confidence 5999998772 1468889999999988 889999999999999 77888877666665543
No 380
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.34 E-value=3.4e-13 Score=144.51 Aligned_cols=132 Identities=19% Similarity=0.186 Sum_probs=105.4
Q ss_pred eeecccccccCCceEEEe---eeec--CchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 409 FVSNTEIAKGSNGTVVYE---GIYE--GRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~---~~~~--g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
..+.++||.|-||.||.. .... .-.||||..+.. ..+.+..|...| +.++|||||+|+|+|.. ..+|||
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iM-rnfdHphIikLIGv~~e-~P~Wiv 468 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIM-RNFDHPHIIKLIGVCVE-QPMWIV 468 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHH-HhCCCcchhheeeeeec-cceeEE
Confidence 455689999999998752 2212 346899988753 455678888555 55599999999999975 568999
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
||+++ |.|.+||+.. ...++......++.|+ |.|||++++|||||- |+.+.-=.++.+++|.|
T Consensus 469 mEL~~~GELr~yLq~n-----k~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR 539 (974)
T KOG4257|consen 469 MELAPLGELREYLQQN-----KDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSR 539 (974)
T ss_pred EecccchhHHHHHHhc-----cccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhh
Confidence 99998 9999999983 3568888899999999 999999999999998 77777666777777766
No 381
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.34 E-value=1.7e-13 Score=137.37 Aligned_cols=132 Identities=23% Similarity=0.326 Sum_probs=107.5
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|+..+.||+|.||.||.. ...+++.+|+|.+.... .+....|+..+... +|+||+++++++...+..+++|||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKEL-KHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhc-CCCCHHHHHhhhhcCCceEEEecC
Confidence 456788999999998874 55678999999887532 23455787655544 899999999999999999999999
Q ss_pred cccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 483 CTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 483 ~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
++++|.+++.... ..+++..+..++.|+ |.|||+++|+||||+ +++.+|..++..+.+.
T Consensus 80 ~~~~l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~ 145 (282)
T cd07829 80 CDMDLKKYLDKRP-----GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLA 145 (282)
T ss_pred cCcCHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcc
Confidence 9999999998721 468899999999998 889999999999999 7778787776665543
No 382
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.34 E-value=4.7e-13 Score=131.74 Aligned_cols=134 Identities=22% Similarity=0.298 Sum_probs=107.4
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|.+.+.||.|+||.||.. ...+++.+|+|++... ....+.+|++.+..+ +|||++++++.+......++++|+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL-NHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhc-CCCChhheEEEEecCCEEEEEEEe
Confidence 788899999999998874 5567899999987643 234566788666555 899999999999999999999999
Q ss_pred ccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 483 CTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 483 ~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
++| +|.+++..... ....+++..+..++.|+ |.|||+++++|+||+ +++.++......+.+
T Consensus 81 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~ 149 (258)
T cd08215 81 ADGGDLSQKIKKQKK--EGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGI 149 (258)
T ss_pred cCCCcHHHHHHHhhc--cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccc
Confidence 985 99999987321 13568899999999998 889999999999999 777777665554443
No 383
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.34 E-value=3.1e-13 Score=137.92 Aligned_cols=130 Identities=24% Similarity=0.294 Sum_probs=104.7
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT 484 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~ 484 (549)
|....+||+|+||.||.. ...+++.||+|.+... ....+.+|+..+. .++|+||+++++++...+..|++|||++
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~-~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 100 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMR-DYQHENVVEMYNSYLVGDELWVVMEFLE 100 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHH-hcCCcchhheeeEEEeCCEEEEEEecCC
Confidence 333468999999998874 5567899999976521 2335667886554 4599999999999999999999999998
Q ss_pred c-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 485 C-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 485 G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+ +|.+++.. ..+++..+..++.|+ |+|||+.+++||||| +++.+|......++++
T Consensus 101 ~~~L~~~~~~-------~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~ 163 (292)
T cd06657 101 GGALTDIVTH-------TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC 163 (292)
T ss_pred CCcHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccc
Confidence 5 88887754 347888889999998 889999999999999 8888888777766654
No 384
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.33 E-value=5.4e-13 Score=135.34 Aligned_cols=130 Identities=26% Similarity=0.339 Sum_probs=104.4
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT 484 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~ 484 (549)
|...+.||+|++|.||+. ...+++.+|+|++... ..+.+.+|+..+. .++||||+++++++...+..++++||+.
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~-~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMR-DYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHH-HcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 445579999999998874 4567889999966422 2334667886554 4599999999999999999999999997
Q ss_pred -cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 485 -CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 485 -GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
++|.+++.. ..+++..+..++.|+ |+|||+++++||||+ +++.+|......+.++
T Consensus 100 ~~~L~~~~~~-------~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~ 162 (285)
T cd06648 100 GGALTDIVTH-------TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFC 162 (285)
T ss_pred CCCHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccc
Confidence 599998865 347888888999988 889999999999999 7888887776665544
No 385
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.33 E-value=7.8e-14 Score=150.54 Aligned_cols=135 Identities=23% Similarity=0.275 Sum_probs=114.6
Q ss_pred eeeeecccccccCCceEEE-eeeecCchhHHHHHHHH---HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 407 KLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
+.|++...+|.|+||.||+ +++.+++..|+|.++.+ .......|+ .+++-++|||||.++|.+...+..++.|||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei-~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEI-GMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccce-eeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 4488899999999999998 68899999999999865 334456788 455666999999999999999999999999
Q ss_pred cc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhhc
Q 042769 483 CT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRL 548 (549)
Q Consensus 483 ~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd 548 (549)
|. |+|.+.-+- .+.+++.++...++.. |.|||+++-+||||| |+...|..+..+++-..+
T Consensus 94 cgggslQdiy~~------TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaq 161 (829)
T KOG0576|consen 94 CGGGSLQDIYHV------TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQ 161 (829)
T ss_pred cCCCcccceeee------cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhh
Confidence 98 599888766 6789999999998887 889999999999999 888888887776654433
No 386
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.32 E-value=3.9e-13 Score=137.79 Aligned_cols=129 Identities=19% Similarity=0.060 Sum_probs=98.8
Q ss_pred ecccccccCCceEEEeeeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-
Q 042769 411 SNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT- 484 (549)
Q Consensus 411 ~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~- 484 (549)
+++.+|.|+++.|+ ++..+++.||||++... ....+.+|+..+..+ +||||+++++++...+..|++||||+
T Consensus 6 i~~~~~~~~~v~~~-~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (314)
T cd08216 6 IGKCFEDLMIVHLA-KHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQL-QHPNILPYVTSFIVDSELYVVSPLMAY 83 (314)
T ss_pred hhHhhcCCceEEEE-EecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhc-CCcchhhhhheeecCCeEEEEEeccCC
Confidence 33444555554322 45668999999986532 234677888666554 99999999999999999999999998
Q ss_pred cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 485 CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 485 GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
|+|.+++.... ...+++..+..++.|+ |+|||+++|+||||| |++.+|..+...+.+
T Consensus 84 ~~l~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~ 147 (314)
T cd08216 84 GSCEDLLKTHF----PEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRY 147 (314)
T ss_pred CCHHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCcc
Confidence 69999998632 3458888999999998 899999999999999 788878766554443
No 387
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.32 E-value=3.3e-13 Score=140.83 Aligned_cols=133 Identities=23% Similarity=0.306 Sum_probs=105.6
Q ss_pred eeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcc-----
Q 042769 406 GKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKD----- 474 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~----- 474 (549)
.+.|...+.||+|+||.||.. ...+|+.||||++.+. ....+.+|+..+.. ++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKH-MQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHh-cCCCCccchhheecccccCCCC
Confidence 345999999999999998874 5667999999987642 12345678866555 49999999999986543
Q ss_pred -eEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 475 -FVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 475 -~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
..|++|||+.++|.+++. ..+++..+..++.|+ |+|||+++++||||| |++.+|.++...+.++
T Consensus 93 ~~~~lv~e~~~~~l~~~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 93 QDFYLVMPYMQTDLQKIMG--------HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred ceEEEEecccccCHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 469999999888776652 247888889999998 899999999999999 8888888887777665
Q ss_pred h
Q 042769 547 R 547 (549)
Q Consensus 547 r 547 (549)
+
T Consensus 165 ~ 165 (342)
T cd07879 165 R 165 (342)
T ss_pred c
Confidence 4
No 388
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.32 E-value=1.1e-13 Score=133.17 Aligned_cols=123 Identities=20% Similarity=0.144 Sum_probs=82.4
Q ss_pred cccccccCCceEEEeeeecCchhHHHHHHHHHh-----------------------------hhhHHHHHHHHhcCCCCC
Q 042769 412 NTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALH-----------------------------DVAFKEIQNLIASDQHPN 462 (549)
Q Consensus 412 ~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~~-----------------------------~~~~~Ei~~L~~~l~HpN 462 (549)
...||+|+||.||.+...+|+.||||+++.... ....+|+..|.++ .+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL-VTAG 80 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH-HHCC
Confidence 368999999999886444899999998754310 0112477666555 5555
Q ss_pred eeEEeeeccCcceEEEEeccccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecc-cceeEEEeecc----ccc
Q 042769 463 IVRWYGVENDKDFVYLSLERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRL-DSVKVIIRDLS----LWK 533 (549)
Q Consensus 463 IVrl~g~~~~~~~~yLVmE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yL-H~~~IIHRDLK----Ll~ 533 (549)
+.....+... ..+|||||++| +|...+.. ...+++..+..++.|+ |.|| |+.+|+||||| |++
T Consensus 81 v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~------~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~ 152 (190)
T cd05147 81 IPCPEPILLK--SHVLVMEFIGDDGWAAPRLK------DAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH 152 (190)
T ss_pred CCCCcEEEec--CCEEEEEEeCCCCCcchhhh------cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE
Confidence 4322221111 23799999986 55444322 3468888899999987 8898 79999999999 665
Q ss_pred cCCCCchhhhh
Q 042769 534 ADGHPSPLLLS 544 (549)
Q Consensus 534 ~~G~p~~~l~~ 544 (549)
+|.....++.
T Consensus 153 -~~~v~LiDFG 162 (190)
T cd05147 153 -DGKLYIIDVS 162 (190)
T ss_pred -CCcEEEEEcc
Confidence 4665555444
No 389
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.31 E-value=4.6e-13 Score=137.52 Aligned_cols=133 Identities=25% Similarity=0.307 Sum_probs=105.7
Q ss_pred eeeeecccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 407 KLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
+.|...+.||+|+||.||+. ...+++.+|+|.+... ....+.+|+..+.. ++|+|++++++++......++|
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv 93 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK-LRHPNTIQYRGCYLREHTAWLV 93 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHh-CCCCCcccEEEEEEcCCeeEEE
Confidence 33777889999999998874 5567888999876421 22345678865555 4999999999999999999999
Q ss_pred ecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 480 LERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 480 mE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
|||+.|+|.+++... ...+++..+..++.|+ |.|||+++++||||| |++.+|.+....+.+
T Consensus 94 ~e~~~~~l~~~~~~~-----~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~ 161 (308)
T cd06634 94 MEYCLGSASDLLEVH-----KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGS 161 (308)
T ss_pred EEccCCCHHHHHHHc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCccc
Confidence 999999988887652 3457888889999888 889999999999999 778888766665544
No 390
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.31 E-value=1.6e-13 Score=131.80 Aligned_cols=113 Identities=18% Similarity=0.199 Sum_probs=98.2
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHHHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcc--eEEEEeccccc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNIVRWYGVENDKD--FVYLSLERCTC 485 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~--~~yLVmE~~~G 485 (549)
|++.+++|+|.|++|+- ....++++++||++++-....+.+|+.+|..+..|||||+|++...+.. ...||+||++.
T Consensus 40 Yeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n 119 (338)
T KOG0668|consen 40 YEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNN 119 (338)
T ss_pred HHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhcc
Confidence 99999999999999766 3557789999999998777789999999999988999999999988765 46799999975
Q ss_pred -chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc
Q 042769 486 -SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 486 -sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
+...+... ++...++.++.|+ |.|||++||+|||+|
T Consensus 120 ~Dfk~ly~t---------l~d~dIryY~~elLkALdyCHS~GImHRDVK 159 (338)
T KOG0668|consen 120 TDFKQLYPT---------LTDYDIRYYIYELLKALDYCHSMGIMHRDVK 159 (338)
T ss_pred ccHHHHhhh---------hchhhHHHHHHHHHHHHhHHHhcCcccccCC
Confidence 76665543 7888999999999 889999999999999
No 391
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.31 E-value=4.5e-13 Score=132.27 Aligned_cols=133 Identities=23% Similarity=0.264 Sum_probs=104.6
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
|++.+.||+|+||.||. ....+++.+|+|.+... ......+|+..+..+ +|+||+++++++......|++|||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASV-NHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhC-CCCCchhhhhhhccCCEEEEEehh
Confidence 78889999999999887 46677889999976643 223455777666555 899999999999999999999999
Q ss_pred ccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhh
Q 042769 483 CTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 483 ~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
++| +|.+++.... .....+++..+..++.|+ |.|||+.+++||||+ +++.++..+...+.
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g 148 (256)
T cd08530 81 APFGDLSKAISKRK--KKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLG 148 (256)
T ss_pred cCCCCHHHHHHHHH--hhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeecc
Confidence 975 9999987632 112457888888998888 889999999999999 66776665555443
No 392
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.31 E-value=7.9e-14 Score=153.13 Aligned_cols=132 Identities=23% Similarity=0.241 Sum_probs=103.8
Q ss_pred eeecccccccCCceEEEeee-ec----CchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 409 FVSNTEIAKGSNGTVVYEGI-YE----GRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~-~~----g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
....++||+|+||+||+... -. +-+||+|++... ....++.|..+| +.++|||++||+++|.... +-||
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~m-asldHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRM-ASLDHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHH-hcCCCchHHHHhhhcccch-HHHH
Confidence 33457999999999876321 12 457899977753 344566777454 5569999999999998776 7789
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
++|++ |.|.+|++.++ ..+.....+.+..|| |.|||.++++||||- |+++-.+.+.-++.|++
T Consensus 776 tq~mP~G~LlDyvr~hr-----~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ 846 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHR-----DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAK 846 (1177)
T ss_pred HHhcccchHHHHHHHhh-----ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhh
Confidence 99998 79999999854 567888889999999 999999999999998 88887777776666543
No 393
>PRK10345 hypothetical protein; Provisional
Probab=99.30 E-value=6.1e-13 Score=130.00 Aligned_cols=122 Identities=14% Similarity=0.222 Sum_probs=86.4
Q ss_pred cccccccCCceEEEeeeecCchhHHHHHHHH---HhhhhHHHHHHHHhcC----CCCCeeEEeeeccCcc---eEE-EEe
Q 042769 412 NTEIAKGSNGTVVYEGIYEGRPVAVKRLVRA---LHDVAFKEIQNLIASD----QHPNIVRWYGVENDKD---FVY-LSL 480 (549)
Q Consensus 412 ~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~---~~~~~~~Ei~~L~~~l----~HpNIVrl~g~~~~~~---~~y-LVm 480 (549)
.+.||+|+||.||. +..++.. +||++... ......+|+..+..+. .||||++++|+++++. .++ +||
T Consensus 7 ~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~ 84 (210)
T PRK10345 7 QSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA 84 (210)
T ss_pred cceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence 57999999998775 6556555 58866643 3446789997776653 5899999999998874 444 789
Q ss_pred cccc---cchhhhhhhcccCCcccccCchhhhHHhhhe----eecccceeEEEeecc----ccccC--CCCchhhhh
Q 042769 481 ERCT---CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY----KLRLDSVKVIIRDLS----LWKAD--GHPSPLLLS 544 (549)
Q Consensus 481 E~~~---GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi----L~yLH~~~IIHRDLK----Ll~~~--G~p~~~l~~ 544 (549)
||+. |+|.+++.+ ..+++. ..++.|+ ++|||+++|+||||| |++.+ +...++|++
T Consensus 85 e~~G~~~~tL~~~l~~-------~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiD 152 (210)
T PRK10345 85 DFDGKPSITLTEFAEQ-------CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCD 152 (210)
T ss_pred cCCCCcchhHHHHHHc-------ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEE
Confidence 9943 599999965 235444 2334444 489999999999999 66643 333444443
No 394
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.28 E-value=2.1e-12 Score=131.83 Aligned_cols=137 Identities=12% Similarity=0.110 Sum_probs=95.3
Q ss_pred cceeeeeecccccccCCceEEEe-eeec---CchhHHHHHHHHH--------------hhhhHHHHHHHHhcCCCCCeeE
Q 042769 404 NVGKLFVSNTEIAKGSNGTVVYE-GIYE---GRPVAVKRLVRAL--------------HDVAFKEIQNLIASDQHPNIVR 465 (549)
Q Consensus 404 ~igk~y~~~~~LG~G~fG~V~~~-~~~~---g~~VAVK~i~~~~--------------~~~~~~Ei~~L~~~l~HpNIVr 465 (549)
..++.|++.++||+|+||.||+. ...+ +..+|+|...... ......++..+ ..+.|+||++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~-~~~~h~~i~~ 87 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNI-HNIDHLGIPK 87 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHh-ccCCCCCCCc
Confidence 34456999999999999998874 3333 4455555322110 00111222222 3458999999
Q ss_pred EeeeccCcc----eEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----cccc
Q 042769 466 WYGVENDKD----FVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKA 534 (549)
Q Consensus 466 l~g~~~~~~----~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~ 534 (549)
+++++.... ..+++||++..++.+++.. ....++..+..++.|+ |+|||+++|+||||| |++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~ 161 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKLVENTKEIFKR------IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDG 161 (294)
T ss_pred EEEeeeEecCCceEEEEEEehhccCHHHHHHh------hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence 999765443 4578889887777777655 2335677788899988 889999999999999 8888
Q ss_pred CCCCchhhhhhhh
Q 042769 535 DGHPSPLLLSLMR 547 (549)
Q Consensus 535 ~G~p~~~l~~Lmr 547 (549)
++.+.+.++++++
T Consensus 162 ~~~~~l~DFGla~ 174 (294)
T PHA02882 162 NNRGYIIDYGIAS 174 (294)
T ss_pred CCcEEEEEcCCce
Confidence 8888877777754
No 395
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.28 E-value=5.9e-13 Score=131.12 Aligned_cols=125 Identities=29% Similarity=0.305 Sum_probs=100.5
Q ss_pred ccccCCceEEEe-eeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-cc
Q 042769 415 IAKGSNGTVVYE-GIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-CS 486 (549)
Q Consensus 415 LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-Gs 486 (549)
||+|+||.||.. ...+++.+|+|.+.... ...+..|+..+ +.++||||+++++.+......|++||++. ++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNIL-SRINHPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHH-HHcCCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 699999998874 44568899999776532 23566777554 45589999999999999999999999996 69
Q ss_pred hhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 487 LDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 487 L~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
|.+++.. ...+++..+..++.|+ |.|||+++++|+||+ +++.+|......+.++
T Consensus 80 L~~~l~~------~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~ 140 (250)
T cd05123 80 LFSHLSK------EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLA 140 (250)
T ss_pred HHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcc
Confidence 9999987 4468889999999988 889999999999999 7777776655554443
No 396
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.27 E-value=3.1e-13 Score=132.71 Aligned_cols=132 Identities=19% Similarity=0.271 Sum_probs=107.5
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcc-----eEE
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKD-----FVY 477 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~-----~~y 477 (549)
.+-.+.||-|+||.|+- .+-.+|+.||+|++..- ...+.++|+. |+...+|.|+...++...-.. ++|
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~k-mLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIK-MLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHH-HHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 34457999999996544 47788999999988742 3557889994 556669999999998876443 589
Q ss_pred EEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 478 LSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 478 LVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
++.|+|..+|...|-. ...++.+.+.-++.|| |.|||+.+|+||||| |+++|---++-.++|+|
T Consensus 134 V~TELmQSDLHKIIVS------PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLAR 204 (449)
T KOG0664|consen 134 VLTELMQSDLHKIIVS------PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLAR 204 (449)
T ss_pred HHHHHHHhhhhheecc------CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEeccccccc
Confidence 9999999999999877 6789999999999999 889999999999999 67777666666777776
No 397
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.27 E-value=8e-13 Score=136.85 Aligned_cols=130 Identities=23% Similarity=0.305 Sum_probs=103.8
Q ss_pred CCccceeeeeecccccccCCceEEEe-eeecCchhHHHHHHH--H--------HhhhhHHHHHHHHhcCCCCCeeEEeee
Q 042769 401 QGRNVGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVR--A--------LHDVAFKEIQNLIASDQHPNIVRWYGV 469 (549)
Q Consensus 401 ~~~~igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~--~--------~~~~~~~Ei~~L~~~l~HpNIVrl~g~ 469 (549)
+-..+.++|-+..+||+|+|+.||++ ++...+.||||+-.. . ....+.+|..+.. .++||.||++|++
T Consensus 457 DHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHK-eLDHpRIVKlYDy 535 (775)
T KOG1151|consen 457 DHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHK-ELDHPRIVKLYDY 535 (775)
T ss_pred cCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhh-ccCcceeeeeeee
Confidence 45677788999999999999998885 778889999995432 1 2335678885554 4599999999999
Q ss_pred cc-CcceEEEEeccccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccce--eEEEeecc---ccccCCC
Q 042769 470 EN-DKDFVYLSLERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSV--KVIIRDLS---LWKADGH 537 (549)
Q Consensus 470 ~~-~~~~~yLVmE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~--~IIHRDLK---Ll~~~G~ 537 (549)
|. +.+.+|-|+|||+| +|.-||+. ..-+++..++.|+.|| |.||.+. .|||-||| ++..+|.
T Consensus 536 fslDtdsFCTVLEYceGNDLDFYLKQ------hklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gt 607 (775)
T KOG1151|consen 536 FSLDTDSFCTVLEYCEGNDLDFYLKQ------HKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGT 607 (775)
T ss_pred eeeccccceeeeeecCCCchhHHHHh------hhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCc
Confidence 87 45568999999998 89999988 4568999999999999 8899854 69999999 4444443
No 398
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=99.27 E-value=8.9e-12 Score=132.02 Aligned_cols=136 Identities=15% Similarity=0.264 Sum_probs=106.0
Q ss_pred CceeccCCCccccccccceeeeeccccccccccceeeecCCcchhhhccc-cccccCCcchhh--hhhcCCCccccccee
Q 042769 1 VSWTFGTGTPIYSSYQAPVQATVDQDNASELTNSFFIDCGEDWGLYAHGL-LGRMKLPQSIDD--YVKTAPHITEEGAVT 77 (549)
Q Consensus 1 ~~W~f~tg~~i~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~--~v~~sP~~~~dg~v~ 77 (549)
++|+++.+....-.|..|. |+..++.++.+..||.|||+|+ .|..+|.+.... ..-++|.+..||.||
T Consensus 45 ~~W~~~~~~~~~~~~~~~~---------~~~~dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~i~ 115 (370)
T COG1520 45 LLWSVSLGSGGGGIYAGPA---------PADGDGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGKIY 115 (370)
T ss_pred eeeeeecccCccceEeccc---------cEeeCCeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCeEE
Confidence 4688764443333333231 3666777888889999999999 788899999985 678888888899999
Q ss_pred ecceeeEEEEEEccccceeeecCCCCCCccccchhhhcccccccccchHHHHhhccCccccccccCceEEEEEcccceee
Q 042769 78 LGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQ 157 (549)
Q Consensus 78 ~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~ 157 (549)
+|+.++.+|++|+.||+++|++..+. + +....++.+ ..++||+++.|++|+
T Consensus 116 ~g~~~g~~y~ld~~~G~~~W~~~~~~-~-------------------------~~~~~~~v~---~~~~v~~~s~~g~~~ 166 (370)
T COG1520 116 VGSWDGKLYALDASTGTLVWSRNVGG-S-------------------------PYYASPPVV---GDGTVYVGTDDGHLY 166 (370)
T ss_pred EecccceEEEEECCCCcEEEEEecCC-C-------------------------eEEecCcEE---cCcEEEEecCCCeEE
Confidence 99999999999999999999998863 0 112223333 238999999999999
Q ss_pred cccCCCCCceeeeeeeh
Q 042769 158 SFEPNSDNVSWSMTVAE 174 (549)
Q Consensus 158 a~d~~~g~~~Wn~~~~~ 174 (549)
|+|+.+|+.+|++.+..
T Consensus 167 al~~~tG~~~W~~~~~~ 183 (370)
T COG1520 167 ALNADTGTLKWTYETPA 183 (370)
T ss_pred EEEccCCcEEEEEecCC
Confidence 99999999999988765
No 399
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.27 E-value=1.1e-12 Score=130.59 Aligned_cols=119 Identities=23% Similarity=0.271 Sum_probs=91.3
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHH--------HHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVR--------ALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLS 479 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~--------~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLV 479 (549)
|.+.+.||+|+||.||.. ....+..+++|.++. .....+.+|+..+ +.++||||+++++++.+....+++
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLL-SKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHH-HhCCCCcHHHHHHHHhcCCceEEE
Confidence 788899999999998873 444444454443332 1122455677544 445999999999999999999999
Q ss_pred ecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc
Q 042769 480 LERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 480 mE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
|||+. ++|.+++..... ....+++..++.++.|+ |.|||+++++|+|||
T Consensus 81 ~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~ 133 (260)
T cd08222 81 TEYCEGRDLDCKLEELKH--TGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLK 133 (260)
T ss_pred EEeCCCCCHHHHHHHHhh--cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCC
Confidence 99998 599988875321 23468899999999998 889999999999999
No 400
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.26 E-value=6.6e-13 Score=127.53 Aligned_cols=125 Identities=22% Similarity=0.146 Sum_probs=87.9
Q ss_pred cccccccCCceEEEeeeecCchhHHHHHHHHH-----------------------------hhhhHHHHHHHHhcCCCCC
Q 042769 412 NTEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL-----------------------------HDVAFKEIQNLIASDQHPN 462 (549)
Q Consensus 412 ~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~-----------------------------~~~~~~Ei~~L~~~l~HpN 462 (549)
...||+|+||.||++...+|+.||||+++... .....+|+..+.++ .|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL-YEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH-HhCC
Confidence 46899999999988644489999999766421 01123577666554 7787
Q ss_pred eeEEeeeccCcceEEEEeccccc-chhhh-hhhcccCCcccccCchhhhHHhhhe---eecccc-eeEEEeecc----cc
Q 042769 463 IVRWYGVENDKDFVYLSLERCTC-SLDDL-IQTYSDSSCNSVFGEDQATRAMIEY---KLRLDS-VKVIIRDLS----LW 532 (549)
Q Consensus 463 IVrl~g~~~~~~~~yLVmE~~~G-sL~~~-L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~-~~IIHRDLK----Ll 532 (549)
|.....+... ..||||||++| ++... +.. ..+++..+..++.|+ +.+||. +||+||||| |+
T Consensus 81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~-------~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll 151 (190)
T cd05145 81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRLKD-------VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILY 151 (190)
T ss_pred CCCceEEEec--CCEEEEEEecCCCchhhhhhh-------ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEE
Confidence 6433332222 24899999986 34332 322 356777888898888 889999 999999999 66
Q ss_pred ccCCCCchhhhhhhh
Q 042769 533 KADGHPSPLLLSLMR 547 (549)
Q Consensus 533 ~~~G~p~~~l~~Lmr 547 (549)
+ +|.+.+.++++++
T Consensus 152 ~-~~~~~liDFG~a~ 165 (190)
T cd05145 152 H-DGKPYIIDVSQAV 165 (190)
T ss_pred E-CCCEEEEEcccce
Confidence 6 8888888777665
No 401
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.21 E-value=2.6e-12 Score=122.02 Aligned_cols=134 Identities=23% Similarity=0.300 Sum_probs=109.7
Q ss_pred eeecccccccCCceEE-EeeeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVV-YEGIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~-~~~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
..-...||+|+||.|- +++..+|+..|+|++... ...+.++|+...++...+|.+|++||.+.....++|.||.|
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M 127 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM 127 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence 4445789999999873 478999999999988854 23456788888888889999999999999999999999999
Q ss_pred ccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccc-eeEEEeecc----ccccCCCCchhhhh
Q 042769 484 TCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDS-VKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 484 ~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~-~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
.-||..+-+..- ...+.++|..+-+++..+ |.|||+ ..+||||+| |++.+|+.+.-+++
T Consensus 128 ~tSldkfy~~v~--~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFG 194 (282)
T KOG0984|consen 128 DTSLDKFYRKVL--KKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFG 194 (282)
T ss_pred hhhHHHHHHHHH--hcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccc
Confidence 988877755421 235678898888888877 889995 689999999 99999998776554
No 402
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.17 E-value=3.4e-11 Score=123.45 Aligned_cols=123 Identities=18% Similarity=0.153 Sum_probs=104.1
Q ss_pred cceeeeeecccccccCCceEEEe-eeecCchhHHHHHHH--HHhhhhHHHHHHHHhcCCC-C----CeeEEeeeccCcce
Q 042769 404 NVGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVR--ALHDVAFKEIQNLIASDQH-P----NIVRWYGVENDKDF 475 (549)
Q Consensus 404 ~igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~--~~~~~~~~Ei~~L~~~l~H-p----NIVrl~g~~~~~~~ 475 (549)
.+..+|.+.+.+|+|.||.|+.+ +..++..||||+++. ...+.+.-|++.|.++..+ | -+|++.++|...++
T Consensus 86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 34566999999999999998774 666699999999984 3456677888877776433 3 38899999999999
Q ss_pred EEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc
Q 042769 476 VYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 476 ~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
+|||+|.+.-|+.++|..+. ..+++...++.+..|+ ++|||+.+++|-|||
T Consensus 166 iCivfellG~S~~dFlk~N~----y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLK 219 (415)
T KOG0671|consen 166 ICIVFELLGLSTFDFLKENN----YIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLK 219 (415)
T ss_pred eEEEEeccChhHHHHhccCC----ccccchHHHHHHHHHHHHHHHHHHhcceeecCCC
Confidence 99999999889999998833 5679999999999999 889999999999999
No 403
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.17 E-value=7.6e-12 Score=140.84 Aligned_cols=141 Identities=21% Similarity=0.214 Sum_probs=115.5
Q ss_pred eeecccccccCCceEEEe---eeec-----CchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceE
Q 042769 409 FVSNTEIAKGSNGTVVYE---GIYE-----GRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFV 476 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~---~~~~-----g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~ 476 (549)
..+.+.||+|+||.|++. +... ...||||.++.. ..+.+..|+..|.....||||+.++|+|...+.+
T Consensus 298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~ 377 (609)
T KOG0200|consen 298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPL 377 (609)
T ss_pred ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCce
Confidence 344569999999998773 2211 457999988754 2346778998888888999999999999999999
Q ss_pred EEEecccc-cchhhhhhhcc-cC--Ccc-------cccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCC
Q 042769 477 YLSLERCT-CSLDDLIQTYS-DS--SCN-------SVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHP 538 (549)
Q Consensus 477 yLVmE~~~-GsL~~~L~~~~-~~--~~~-------~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p 538 (549)
++|+|||. |+|.++++.++ .. ... ..++..+...++.|| ++||+++++|||||- |+..+...
T Consensus 378 ~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~ 457 (609)
T KOG0200|consen 378 YVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVI 457 (609)
T ss_pred EEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEE
Confidence 99999997 89999999865 00 011 238888999999999 999999999999998 88999889
Q ss_pred chhhhhhhhcC
Q 042769 539 SPLLLSLMRLV 549 (549)
Q Consensus 539 ~~~l~~Lmrd~ 549 (549)
++..++|+||+
T Consensus 458 kIaDFGlar~~ 468 (609)
T KOG0200|consen 458 KIADFGLARDH 468 (609)
T ss_pred EEccccceecc
Confidence 99999999975
No 404
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.17 E-value=8.9e-12 Score=119.99 Aligned_cols=131 Identities=29% Similarity=0.400 Sum_probs=105.0
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
|.+.+.||.|++|.||.. ...+++.+|+|.+... ....+.+|+..+... +|+|++++++++......++++|++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCChhhheeeeecCCceEEEEecc
Confidence 456689999999998874 4445889999988754 344667788766555 9999999999999989999999999
Q ss_pred cc-chhhhhhhcccCCcccc-cCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 484 TC-SLDDLIQTYSDSSCNSV-FGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 484 ~G-sL~~~L~~~~~~~~~~~-l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
.+ +|.+++.. ... +++..+..++.++ +.+||.++++|+||+ +++.++......+.++
T Consensus 80 ~~~~L~~~~~~------~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~ 145 (225)
T smart00221 80 EGGDLFDYLRK------KGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLA 145 (225)
T ss_pred CCCCHHHHHHh------cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCcee
Confidence 86 99999987 223 7788888888888 889999999999999 7777776665555544
No 405
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.16 E-value=7.9e-12 Score=137.04 Aligned_cols=139 Identities=14% Similarity=0.113 Sum_probs=94.5
Q ss_pred eeecccccccCCceEEEee-----------------eecCchhHHHHHHHHH---h--------------hhhHHHHHHH
Q 042769 409 FVSNTEIAKGSNGTVVYEG-----------------IYEGRPVAVKRLVRAL---H--------------DVAFKEIQNL 454 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~-----------------~~~g~~VAVK~i~~~~---~--------------~~~~~Ei~~L 454 (549)
|.+.++||+|+||.||+.. ...++.||||++.... . +....|+..+
T Consensus 147 F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l 226 (507)
T PLN03224 147 FQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMC 226 (507)
T ss_pred ceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHH
Confidence 9999999999999987631 1235679999875321 0 1122344333
Q ss_pred HhcCCCCC-----eeEEeeeccC--------cceEEEEecccc-cchhhhhhhcccCC------------------cccc
Q 042769 455 IASDQHPN-----IVRWYGVEND--------KDFVYLSLERCT-CSLDDLIQTYSDSS------------------CNSV 502 (549)
Q Consensus 455 ~~~l~HpN-----IVrl~g~~~~--------~~~~yLVmE~~~-GsL~~~L~~~~~~~------------------~~~~ 502 (549)
.++ +|.+ +++++++|.. .+..+|||||+. |+|.++++...... ....
T Consensus 227 ~~l-~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~ 305 (507)
T PLN03224 227 AKI-KRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDK 305 (507)
T ss_pred HHh-hcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccccc
Confidence 333 4544 4677777643 356899999997 69999987522100 0112
Q ss_pred cCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhhc
Q 042769 503 FGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRL 548 (549)
Q Consensus 503 l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd 548 (549)
+++..++.++.|+ |.|||+++|+||||| |++.++.+++..+.+.++
T Consensus 306 ~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~ 358 (507)
T PLN03224 306 RDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVD 358 (507)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccc
Confidence 3456677788888 889999999999999 788888888887777654
No 406
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=99.15 E-value=4.9e-11 Score=131.91 Aligned_cols=165 Identities=18% Similarity=0.252 Sum_probs=106.6
Q ss_pred CceeccCCCccccccccceeeeeccccccccccceeeecCCcchhhhccc-cccccCCcchhh-----hhhcCCCccccc
Q 042769 1 VSWTFGTGTPIYSSYQAPVQATVDQDNASELTNSFFIDCGEDWGLYAHGL-LGRMKLPQSIDD-----YVKTAPHITEEG 74 (549)
Q Consensus 1 ~~W~f~tg~~i~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~-----~v~~sP~~~~dg 74 (549)
++|+|..+.+.... +........+.+++..+.+|.++.|+.|||+|+ +|++.|.+.+.+ .+.++|++. +|
T Consensus 91 ~lW~~~~~~~~~~~---~~~~~~~~~rg~av~~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~-~g 166 (527)
T TIGR03075 91 ELWKYDPKLPDDVI---PVMCCDVVNRGVALYDGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVV-KG 166 (527)
T ss_pred eeeEecCCCCcccc---cccccccccccceEECCEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEE-CC
Confidence 47888876542211 000000011235677777888889999999999 999999998753 477899999 88
Q ss_pred ceeecce------eeEEEEEEccccceeeecCCCCCCcc-ccc------hhhhccccccc--ccchHHHHhhccCccccc
Q 042769 75 AVTLGSK------TTTVFVLEAKTGRLIRTYGSPHSSST-LQN------EEQKSASYKHD--KVNNEQLVKSGLTNTAEL 139 (549)
Q Consensus 75 ~v~~Gsk------~~~~~~vda~tG~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 139 (549)
.||+|+- ++.++|+|++||+++|++.+-..... ... ++-....-.++ +......|.+...++.
T Consensus 167 ~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~-- 244 (527)
T TIGR03075 167 KVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPE-- 244 (527)
T ss_pred EEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCC--
Confidence 9999964 68999999999999999988531100 000 00000000000 0012233434444443
Q ss_pred cccCceEEEEEccc-----c-----------eeecccCCCCCceeeeeeehh
Q 042769 140 QHKEPYLLFITRTD-----Y-----------TLQSFEPNSDNVSWSMTVAEI 175 (549)
Q Consensus 140 ~~~~~~~v~i~r~d-----~-----------~l~a~d~~~g~~~Wn~~~~~~ 175 (549)
.++|||+... + .|.|+|++||+++|.|.....
T Consensus 245 ----~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~ 292 (527)
T TIGR03075 245 ----TNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPH 292 (527)
T ss_pred ----CCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCC
Confidence 3899999843 3 799999999999999977544
No 407
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.15 E-value=4e-12 Score=125.06 Aligned_cols=124 Identities=16% Similarity=0.237 Sum_probs=102.2
Q ss_pred cCCccceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHH--HhhhhHHHHHHHHhcCCCCCeeEEeee-ccCcce
Q 042769 400 AQGRNVGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA--LHDVAFKEIQNLIASDQHPNIVRWYGV-ENDKDF 475 (549)
Q Consensus 400 ~~~~~igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~~l~HpNIVrl~g~-~~~~~~ 475 (549)
.....+.+.|.+.+.||+|.||.+.+ +++.+++.+++|.+.+. ....+.+|+..-..+-.|.||+.-|++ |+..+.
T Consensus 17 l~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~ 96 (378)
T KOG1345|consen 17 LKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDA 96 (378)
T ss_pred ccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCce
Confidence 34445556699999999999999877 58888999999988764 244677898665556579999988765 788888
Q ss_pred EEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
..+++|||+ |+|.+-+.. .++.|....+++.|+ +.|||++++||||||
T Consensus 97 YvF~qE~aP~gdL~snv~~-------~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK 148 (378)
T KOG1345|consen 97 YVFVQEFAPRGDLRSNVEA-------AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLK 148 (378)
T ss_pred EEEeeccCccchhhhhcCc-------ccccHHHHHHHHHHHHHHHHHhhccchhhcccc
Confidence 999999998 899887755 457888889999998 889999999999999
No 408
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=99.15 E-value=3.5e-11 Score=127.53 Aligned_cols=118 Identities=21% Similarity=0.326 Sum_probs=91.9
Q ss_pred ccccc-ceeeecCCcchhhhccc-cccccCCcchhh-hhhcCCCcccccceeecceeeEEEEEEccccceeeecCCCCCC
Q 042769 29 SELTN-SFFIDCGEDWGLYAHGL-LGRMKLPQSIDD-YVKTAPHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSS 105 (549)
Q Consensus 29 ~~~~~-~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~-~v~~sP~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~ 105 (549)
|.+.. +.+++++.||.||++|. +|.++|.++.+. +.-.+|++..||+||+++.++++|+||+.||+.+|++..+.+
T Consensus 106 ~~~~~~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~- 184 (370)
T COG1520 106 PILGSDGKIYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAP- 184 (370)
T ss_pred ceEEeCCeEEEecccceEEEEECCCCcEEEEEecCCCeEEecCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCc-
Confidence 55444 55999999999999999 999999999999 444444555599999999889999999999999999888641
Q ss_pred ccccchhhhcccccccccchHHHHhhccCccccccccCceEEEEEcc--cceeecccCCCCCceeeeeee
Q 042769 106 STLQNEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRT--DYTLQSFEPNSDNVSWSMTVA 173 (549)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~--d~~l~a~d~~~g~~~Wn~~~~ 173 (549)
+....+.++ .. ..+.||++.. ++.++|+|+++|..+|+..+.
T Consensus 185 --~~~~~~~~~---------------------~~---~~~~vy~~~~~~~~~~~a~~~~~G~~~w~~~~~ 228 (370)
T COG1520 185 --LSLSIYGSP---------------------AI---ASGTVYVGSDGYDGILYALNAEDGTLKWSQKVS 228 (370)
T ss_pred --cccccccCc---------------------ee---ecceEEEecCCCcceEEEEEccCCcEeeeeeee
Confidence 111111111 11 2379999998 789999999999999995433
No 409
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=99.15 E-value=1.4e-11 Score=121.10 Aligned_cols=116 Identities=21% Similarity=0.371 Sum_probs=91.0
Q ss_pred ccceeeecCCcchhhhccc-cccccCCcchhhhhhcCCCcccccceeecceeeEEEEEEccccceeee-cCCCCCCcccc
Q 042769 32 TNSFFIDCGEDWGLYAHGL-LGRMKLPQSIDDYVKTAPHITEEGAVTLGSKTTTVFVLEAKTGRLIRT-YGSPHSSSTLQ 109 (549)
Q Consensus 32 ~~~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~~v~~sP~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~-~~~~~~~~~~~ 109 (549)
..+.+|.++.++.||++|+ +|+..|.++.++.+...|.+. ++.||+++.++.++++|++||+++|+ .........+.
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~-~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~ 113 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPVVD-GGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVR 113 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEEEE-TTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccceeeec-ccccccccceeeeEecccCCcceeeeeccccccccccc
Confidence 4555777789999999998 999999999999888989777 88899999999999999999999999 45532100000
Q ss_pred chhhhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCceeeeeeeh
Q 042769 110 NEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVSWSMTVAE 174 (549)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~Wn~~~~~ 174 (549)
.+ ..+... .+.+|++..++.|+++|+++|+++|++.+..
T Consensus 114 --------------------~~--~~~~~~----~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~ 152 (238)
T PF13360_consen 114 --------------------SS--SSPAVD----GDRLYVGTSSGKLVALDPKTGKLLWKYPVGE 152 (238)
T ss_dssp ------------------------SEEEEE----TTEEEEEETCSEEEEEETTTTEEEEEEESST
T ss_pred --------------------cc--cCceEe----cCEEEEEeccCcEEEEecCCCcEEEEeecCC
Confidence 00 011111 2689999999999999999999999998855
No 410
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=99.13 E-value=6.1e-11 Score=135.22 Aligned_cols=160 Identities=13% Similarity=0.187 Sum_probs=107.2
Q ss_pred CceeccCCCcccccccccee-----eee-----ccc--cccccccceeeecCCcchhhhccc-cccccCCcchhh-----
Q 042769 1 VSWTFGTGTPIYSSYQAPVQ-----ATV-----DQD--NASELTNSFFIDCGEDWGLYAHGL-LGRMKLPQSIDD----- 62 (549)
Q Consensus 1 ~~W~f~tg~~i~ss~~~~~~-----~~~-----~~~--~~~~~~~~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~----- 62 (549)
++|+|..+.++.+.+|.-.. -+. .++ .+|++....+|.++.|+.|||+|+ +|+..|.|..+.
T Consensus 216 ~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~ 295 (764)
T TIGR03074 216 EKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLIALDADTGKLCEDFGNNGTVDLT 295 (764)
T ss_pred EEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEEEEECCCCCEEEEecCCCceeee
Confidence 47999998887654432110 000 000 125666777888999999999999 999999987643
Q ss_pred -----------hhhcCCCcccccceeecce----------eeEEEEEEccccceeeecCCCCCC-c-cccchhhhccccc
Q 042769 63 -----------YVKTAPHITEEGAVTLGSK----------TTTVFVLEAKTGRLIRTYGSPHSS-S-TLQNEEQKSASYK 119 (549)
Q Consensus 63 -----------~v~~sP~~~~dg~v~~Gsk----------~~~~~~vda~tG~~~~~~~~~~~~-~-~~~~~~~~~~~~~ 119 (549)
.+.++|+|. +|+||+|+. .+.++|+|++||+++|++.+.... + ..+.++.- .
T Consensus 296 ~~~g~~~~g~~~~ts~P~V~-~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~----~ 370 (764)
T TIGR03074 296 AGMGTTPPGYYYPTSPPLVA-GTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAWDPGNPDPTAPPAPGETY----T 370 (764)
T ss_pred cccCcCCCcccccccCCEEE-CCEEEEEecccccccccCCCcEEEEEECCCCcEeeEEecCCCCcccCCCCCCEe----c
Confidence 257889999 999999964 689999999999999999875311 1 11111110 0
Q ss_pred ccccchHHHHhhccCccccccccCceEEEEEc------------------ccceeecccCCCCCceeeeeeeh
Q 042769 120 HDKVNNEQLVKSGLTNTAELQHKEPYLLFITR------------------TDYTLQSFEPNSDNVSWSMTVAE 174 (549)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r------------------~d~~l~a~d~~~g~~~Wn~~~~~ 174 (549)
. +...-|.+...++. .++||++. ....|.|+|++||+++|.+.+..
T Consensus 371 ~---gg~n~W~~~s~D~~------~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q~~~ 434 (764)
T TIGR03074 371 R---NTPNSWSVASYDEK------LGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQTVH 434 (764)
T ss_pred c---CCCCccCceEEcCC------CCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEecccC
Confidence 0 12222333333432 26888853 24589999999999999997753
No 411
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.12 E-value=2.8e-11 Score=113.85 Aligned_cols=127 Identities=31% Similarity=0.490 Sum_probs=102.3
Q ss_pred ccccCCceEEEe-eeecCchhHHHHHHHHHh----hhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc-cchh
Q 042769 415 IAKGSNGTVVYE-GIYEGRPVAVKRLVRALH----DVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT-CSLD 488 (549)
Q Consensus 415 LG~G~fG~V~~~-~~~~g~~VAVK~i~~~~~----~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~-GsL~ 488 (549)
||+|.+|.||.. ...+++.+++|++..... +.+.+|++.+..+ +|++|+++++++......+++||++. ++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKL-NHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhc-CCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 689999998774 334589999998886533 5677898766555 99999999999999999999999998 5999
Q ss_pred hhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----cccc-CCCCchhhhhhhh
Q 042769 489 DLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKA-DGHPSPLLLSLMR 547 (549)
Q Consensus 489 ~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~-~G~p~~~l~~Lmr 547 (549)
+++.... ..++...+..++.++ +++||+++++|+||+ +++. ++++....+.+++
T Consensus 80 ~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~ 141 (215)
T cd00180 80 DLLKENE-----GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSK 141 (215)
T ss_pred HHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceE
Confidence 9987621 357888888888888 889999999999999 6666 6776666665554
No 412
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.12 E-value=1.6e-12 Score=127.57 Aligned_cols=135 Identities=25% Similarity=0.281 Sum_probs=102.8
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
.+-...||.|+||+|++ .++.+|+.+|||+|+.. ...+++.|....++.-+.||||++||.+..++..||.||+|
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 44457899999999877 68899999999988843 24467789888888879999999999999999999999999
Q ss_pred ccchhhhhhhcccCCcccccCchhhhHHhhhe---eeccc-ceeEEEeecc----ccccCCCCchhhhh
Q 042769 484 TCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLD-SVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 484 ~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH-~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
.-||..+-+..- .-....++|..+-.+.... |.||- ..+|||||+| |+|..|..++-.++
T Consensus 146 d~SlDklYk~vy-~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFG 213 (361)
T KOG1006|consen 146 DISLDKLYKRVY-SVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFG 213 (361)
T ss_pred hhhHHHHHHHHH-HHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeeccc
Confidence 876654433210 0113456666655555444 77887 6799999999 89998887765544
No 413
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.11 E-value=1.9e-11 Score=122.73 Aligned_cols=134 Identities=28% Similarity=0.378 Sum_probs=107.7
Q ss_pred cceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcc---
Q 042769 404 NVGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKD--- 474 (549)
Q Consensus 404 ~igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~--- 474 (549)
.+..+|...+.+|.|+- .|+.+ +...++.||+|++... ...++.+|+ .++..++|+||++++.+|.-..
T Consensus 14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel-~l~~~v~~~nii~l~n~ftP~~~l~ 91 (369)
T KOG0665|consen 14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYREL-KLMKCVNHKNIISLLNVFTPQKTLE 91 (369)
T ss_pred eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhh-hhhhhhcccceeeeeeccCccccHH
Confidence 45566888999999988 45553 6778999999988754 344678999 4555669999999999987544
Q ss_pred ---eEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhh
Q 042769 475 ---FVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 475 ---~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
..|+|||+|.++|.+.+.. .+....+..++.|+ ++|||+.+|+||||| ++..+..-++..+.
T Consensus 92 ~~~e~y~v~e~m~~nl~~vi~~--------elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg 163 (369)
T KOG0665|consen 92 EFQEVYLVMELMDANLCQVILM--------ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFG 163 (369)
T ss_pred HHHhHHHHHHhhhhHHHHHHHH--------hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccch
Confidence 4899999999999998864 36777888999998 789999999999999 77777777777777
Q ss_pred hhh
Q 042769 545 LMR 547 (549)
Q Consensus 545 Lmr 547 (549)
|+|
T Consensus 164 ~ar 166 (369)
T KOG0665|consen 164 LAR 166 (369)
T ss_pred hhc
Confidence 665
No 414
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.10 E-value=2.6e-11 Score=131.29 Aligned_cols=128 Identities=27% Similarity=0.287 Sum_probs=100.9
Q ss_pred eeeeeecccccccCCceEEE-eeeecCchhHHHHHHHHHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc
Q 042769 406 GKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT 484 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~ 484 (549)
...|.+...+|.|+|+.|-+ ....+++..|+|++.+. .....+|+..+....+||||+.+.+.+.+..+.|+|||.++
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~-~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~ 399 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR-ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLD 399 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc-ccccccccchhhhhcCCCcceeecceecCCceeeeeehhcc
Confidence 44488888899999998766 47788999999999876 34556777666666699999999999999999999999998
Q ss_pred c-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----cc-ccCCCCchh
Q 042769 485 C-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LW-KADGHPSPL 541 (549)
Q Consensus 485 G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll-~~~G~p~~~ 541 (549)
| -|.+.+.. ...+. ..+..+++|+ +.|||++|+|||||| |+ ++.|+-.+.
T Consensus 400 g~ell~ri~~------~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrlt 458 (612)
T KOG0603|consen 400 GGELLRRIRS------KPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLT 458 (612)
T ss_pred ccHHHHHHHh------cchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEE
Confidence 5 55555555 22233 6777888888 889999999999999 66 466654433
No 415
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.10 E-value=2e-11 Score=118.48 Aligned_cols=122 Identities=21% Similarity=0.155 Sum_probs=99.0
Q ss_pred ccceeeeeecccccccCCceEEE-eeeecCchhHHHHHHHH-HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 403 RNVGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA-LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 403 ~~igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~-~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
..+++ |.+.++||.|+||.+|. .+...|.+||||.-... ...+...|......+.....|.+++.+.....+-.|||
T Consensus 12 iv~gk-y~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 12 IVGGK-YKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eeccc-eEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 34455 99999999999999998 58889999999965533 34466677755444434567888888888888889999
Q ss_pred cccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc
Q 042769 481 ERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 481 E~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
|++..+|.+++..|. ..++...++.++-|+ ++|+|.+++||||||
T Consensus 91 dLLGPsLEdLfnfC~-----R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIK 138 (341)
T KOG1163|consen 91 DLLGPSLEDLFNFCS-----RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIK 138 (341)
T ss_pred eccCccHHHHHHHHh-----hhhhHHhHHHHHHHHHHHHHHHHhhccccccCC
Confidence 999889888887743 568888888899998 889999999999999
No 416
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.06 E-value=2.3e-11 Score=135.72 Aligned_cols=137 Identities=15% Similarity=0.087 Sum_probs=88.5
Q ss_pred eeecccccccCCceEEEe-eeec----CchhHHHHHHHHHhh-hhHHHHHHHHhcCCCCCeeEEeee------ccCcceE
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYE----GRPVAVKRLVRALHD-VAFKEIQNLIASDQHPNIVRWYGV------ENDKDFV 476 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~----g~~VAVK~i~~~~~~-~~~~Ei~~L~~~l~HpNIVrl~g~------~~~~~~~ 476 (549)
|++.++||+|+||.||+. ...+ ++.||+|++...... ....|. +... .+.+++.+... .......
T Consensus 134 y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~--l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 210 (566)
T PLN03225 134 FVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNER--VRRA-CPNSCADFVYGFLEPVSSKKEDEY 210 (566)
T ss_pred eEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHH--HHhh-chhhHHHHHHhhhcccccccCCce
Confidence 999999999999998884 4455 789999977542111 111111 1111 22222222211 2456679
Q ss_pred EEEecccc-cchhhhhhhcccCC--------------cccccCchhhhHHhhhe---eecccceeEEEeecc----cccc
Q 042769 477 YLSLERCT-CSLDDLIQTYSDSS--------------CNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKA 534 (549)
Q Consensus 477 yLVmE~~~-GsL~~~L~~~~~~~--------------~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~ 534 (549)
+|||||+. ++|.+++....... ......+..+..++.|+ |+|||+++|+||||| |++.
T Consensus 211 ~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~ 290 (566)
T PLN03225 211 WLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSE 290 (566)
T ss_pred EEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeC
Confidence 99999997 59999987521000 00011233456788888 889999999999999 7775
Q ss_pred -CCCCchhhhhhhhc
Q 042769 535 -DGHPSPLLLSLMRL 548 (549)
Q Consensus 535 -~G~p~~~l~~Lmrd 548 (549)
++..++.+++++++
T Consensus 291 ~~~~~KL~DFGlA~~ 305 (566)
T PLN03225 291 GSGSFKIIDLGAAAD 305 (566)
T ss_pred CCCcEEEEeCCCccc
Confidence 67888888888764
No 417
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.06 E-value=2.3e-11 Score=125.96 Aligned_cols=119 Identities=19% Similarity=0.231 Sum_probs=100.5
Q ss_pred ccceeeeeecccccccCCceEEEe-eee---cCchhHHHHHHHH-HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEE
Q 042769 403 RNVGKLFVSNTEIAKGSNGTVVYE-GIY---EGRPVAVKRLVRA-LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVY 477 (549)
Q Consensus 403 ~~igk~y~~~~~LG~G~fG~V~~~-~~~---~g~~VAVK~i~~~-~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~y 477 (549)
..+.+.|...++||.|+|++||.. ... .++.||+|.+... ...+...|++.|-.+..+.||+.+.+++..++...
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ 111 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVA 111 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeE
Confidence 345556888999999999998873 333 5789999988865 34567899988888889999999999999999999
Q ss_pred EEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc
Q 042769 478 LSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 478 LVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
+||||++ .+..++... ++...++.+++.+ |.++|.+||||||||
T Consensus 112 ivlp~~~H~~f~~l~~~---------l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiK 159 (418)
T KOG1167|consen 112 IVLPYFEHDRFRDLYRS---------LSLAEIRWYLRNLLKALAHLHKNGIVHRDIK 159 (418)
T ss_pred EEecccCccCHHHHHhc---------CCHHHHHHHHHHHHHHhhhhhccCccccCCC
Confidence 9999998 478887766 6677888888877 899999999999999
No 418
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.02 E-value=1.1e-10 Score=117.93 Aligned_cols=135 Identities=19% Similarity=0.223 Sum_probs=109.8
Q ss_pred CCccceeeeeecccccccCCceEEE-eeeecCchhHHHHHHH-HHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEE
Q 042769 401 QGRNVGKLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVR-ALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYL 478 (549)
Q Consensus 401 ~~~~igk~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~-~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yL 478 (549)
....+|-.|.++++||+|+||.++. .++.+++.||||.-.. +...++..|.....-+...++|...|.+-....+-.|
T Consensus 22 ~~~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiL 101 (449)
T KOG1165|consen 22 GVLMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNIL 101 (449)
T ss_pred CceEecccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhh
Confidence 3456787899999999999997666 6889999999995543 3345677888776556578999999999888888889
Q ss_pred EecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCch
Q 042769 479 SLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSP 540 (549)
Q Consensus 479 VmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~ 540 (549)
|||++.-+|.++..-|. ..|+...+..++.|+ ++|+|++.+|.|||| |+..-|.+..
T Consensus 102 VidLLGPSLEDLFD~Cg-----R~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~ 165 (449)
T KOG1165|consen 102 VIDLLGPSLEDLFDLCG-----RRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDA 165 (449)
T ss_pred hhhhhCcCHHHHHHHhc-----CcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCC
Confidence 99999878877776543 579999999999999 889999999999999 7766555543
No 419
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.02 E-value=2.8e-10 Score=111.03 Aligned_cols=156 Identities=12% Similarity=0.141 Sum_probs=122.8
Q ss_pred CceeccCCCccccccccceeeeeccccccccccceeeecCCcchhhhccc-cccccCCcchhhhhhcCCCcccccceeec
Q 042769 1 VSWTFGTGTPIYSSYQAPVQATVDQDNASELTNSFFIDCGEDWGLYAHGL-LGRMKLPQSIDDYVKTAPHITEEGAVTLG 79 (549)
Q Consensus 1 ~~W~f~tg~~i~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~~v~~sP~~~~dg~v~~G 79 (549)
++|+..++.=|-.| |-+.-.+ . ...++.||..+.+-|+|+ +|+++|.--.+.-+..||++. ..-|.+|
T Consensus 1 ~rW~vd~~kCVDas---pLVV~~d------s-kT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~vv-gdfVV~G 69 (354)
T KOG4649|consen 1 MRWAVDLRKCVDAS---PLVVCND------S-KTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIVV-GDFVVLG 69 (354)
T ss_pred CceeccchhhccCC---cEEEecC------C-ceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEEE-CCEEEEE
Confidence 57999998888877 3322111 1 234688999999999999 999999999999999999999 6669999
Q ss_pred ceeeEEEEEEccccceeeecCCCCCCccccchhhhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeecc
Q 042769 80 SKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSF 159 (549)
Q Consensus 80 sk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~ 159 (549)
.+.+-+|.++.+||+.+|.|...+. -... +..++ +.++||+|+.|+++||+
T Consensus 70 Cy~g~lYfl~~~tGs~~w~f~~~~~--------vk~~---------------a~~d~------~~glIycgshd~~~yal 120 (354)
T KOG4649|consen 70 CYSGGLYFLCVKTGSQIWNFVILET--------VKVR---------------AQCDF------DGGLIYCGSHDGNFYAL 120 (354)
T ss_pred EccCcEEEEEecchhheeeeeehhh--------hccc---------------eEEcC------CCceEEEecCCCcEEEe
Confidence 9999999999999999999988641 1110 01111 23899999999999999
Q ss_pred cCCCCCceeeeeeehhhhhhhccccCCcccccccccc
Q 042769 160 EPNSDNVSWSMTVAEIGYAFLCQDFENPFIGATMNTS 196 (549)
Q Consensus 160 d~~~g~~~Wn~~~~~~~a~~~~~~~~~~~~~~~~~~~ 196 (549)
|+++-.-.|+-+-+.-.-+.|+++.-..++++..-++
T Consensus 121 D~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G 157 (354)
T KOG4649|consen 121 DPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAG 157 (354)
T ss_pred cccccceEEecccCCceeccceecCCCceEEEEeccc
Confidence 9999999999999999999999987444444444333
No 420
>smart00090 RIO RIO-like kinase.
Probab=99.01 E-value=4.9e-11 Score=118.84 Aligned_cols=128 Identities=20% Similarity=0.053 Sum_probs=87.8
Q ss_pred eeeeeecccccccCCceEEEee--eecCchhHHHHHHHHH---------------------------hhhhHHHHHHHHh
Q 042769 406 GKLFVSNTEIAKGSNGTVVYEG--IYEGRPVAVKRLVRAL---------------------------HDVAFKEIQNLIA 456 (549)
Q Consensus 406 gk~y~~~~~LG~G~fG~V~~~~--~~~g~~VAVK~i~~~~---------------------------~~~~~~Ei~~L~~ 456 (549)
|..|.+.+.||+|+||.||.+. ..+|+.||||++.... .....+|+..+.+
T Consensus 27 ~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~ 106 (237)
T smart00090 27 GILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR 106 (237)
T ss_pred CchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 4458888999999999988864 6789999999765321 0123468877766
Q ss_pred cCCC--CCeeEEeeeccCcceEEEEeccccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eeccccee-EEEeec
Q 042769 457 SDQH--PNIVRWYGVENDKDFVYLSLERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVK-VIIRDL 529 (549)
Q Consensus 457 ~l~H--pNIVrl~g~~~~~~~~yLVmE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~-IIHRDL 529 (549)
+ .+ ..+.++++. ...+|||||++| +|..++.. ...+....+..++.|+ +.+||..+ ++||||
T Consensus 107 L-~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~------~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Di 175 (237)
T smart00090 107 L-YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK------DVEPEEEEEFELYDDILEEMRKLYKEGELVHGDL 175 (237)
T ss_pred H-HhcCCCCCeeeEe----cCceEEEEEecCCcccccccc------cCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCC
Confidence 6 33 334445543 234899999997 66655422 2334555667788888 88999999 999999
Q ss_pred c----ccccCCCCchhhhhh
Q 042769 530 S----LWKADGHPSPLLLSL 545 (549)
Q Consensus 530 K----Ll~~~G~p~~~l~~L 545 (549)
| |++ ++.+....+.+
T Consensus 176 kp~NIli~-~~~i~LiDFg~ 194 (237)
T smart00090 176 SEYNILVH-DGKVVIIDVSQ 194 (237)
T ss_pred ChhhEEEE-CCCEEEEEChh
Confidence 9 666 66655544443
No 421
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.01 E-value=8e-11 Score=116.27 Aligned_cols=120 Identities=9% Similarity=-0.012 Sum_probs=87.7
Q ss_pred cceeeeeecccccccCCceEEEeeeecCchhHHHHHHHHH------hhh------hHHHHHHHHhcCCCCCeeEEeeecc
Q 042769 404 NVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL------HDV------AFKEIQNLIASDQHPNIVRWYGVEN 471 (549)
Q Consensus 404 ~igk~y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~------~~~------~~~Ei~~L~~~l~HpNIVrl~g~~~ 471 (549)
.+...|...++||.|+||.|+.... +++.+|+|.+.+.. ... ..+|++.+.++ .||+|..+..++.
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~~~ 105 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDFYL 105 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEeee
Confidence 3455599999999999999988544 57789999887531 111 35777666666 9999999988755
Q ss_pred Cc--------ceEEEEeccccc-chhhhhhhcccCCcccccCchhhhHHhhheeecccceeEEEeecc----ccccCC
Q 042769 472 DK--------DFVYLSLERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEYKLRLDSVKVIIRDLS----LWKADG 536 (549)
Q Consensus 472 ~~--------~~~yLVmE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qiL~yLH~~~IIHRDLK----Ll~~~G 536 (549)
.. ...+|+|||++| +|.++.. +++. ...-+.+.|..||+.|++|||+| |++.+|
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----------~~~~-~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g 172 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE----------ISED-VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG 172 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh----------ccHH-HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC
Confidence 33 358999999998 8877632 2222 22333344899999999999999 677776
No 422
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.00 E-value=1.6e-10 Score=112.32 Aligned_cols=122 Identities=20% Similarity=0.103 Sum_probs=84.7
Q ss_pred eecccccccCCceEEEeeeecCchhHHHHHHHHH-------hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 410 VSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL-------HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 410 ~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~-------~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
.....|++|+||+|++.+. .+++++.+.+.... ...+.+|++.|.++-.|++|++++++ ...|++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3456899999999987554 66777766554321 12467899888877567889999886 346999999
Q ss_pred ccc-chhhhhhhcccCCcccccCchhhhHHhhheeecccceeEEEeec-c----ccccCCCCchhhhhhh
Q 042769 483 CTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEYKLRLDSVKVIIRDL-S----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 483 ~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qiL~yLH~~~IIHRDL-K----Ll~~~G~p~~~l~~Lm 546 (549)
+.| +|.+.+.. .. .....-+.++|.+||++||+|||| | |++.+|++.+.++.++
T Consensus 80 I~G~~L~~~~~~-------~~---~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A 139 (218)
T PRK12274 80 LAGAAMYQRPPR-------GD---LAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLA 139 (218)
T ss_pred ecCccHHhhhhh-------hh---HHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCc
Confidence 987 67544321 11 111122233488999999999999 6 7888898877665543
No 423
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=98.94 E-value=7.8e-11 Score=116.17 Aligned_cols=131 Identities=18% Similarity=0.244 Sum_probs=102.2
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
.+....||.|+.|.|+. +.+.+|..+|||.+.+. ...+++..+..+...-++|.||+.+|+|..+..++|.||.|
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 45567899999999877 57788999999998864 34466777766666657899999999999999999999999
Q ss_pred ccchhhhhhhcccCCcccccCchhhhHHhhhe---eeccc-ceeEEEeecc----ccccCCCCchhhhh
Q 042769 484 TCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLD-SVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 484 ~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH-~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
..-+..++++ ..++++|..+-.+...+ |.||. .++|||||+| |+|..|+.+.-.++
T Consensus 174 s~C~ekLlkr-----ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFG 237 (391)
T KOG0983|consen 174 STCAEKLLKR-----IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFG 237 (391)
T ss_pred HHHHHHHHHH-----hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeeccc
Confidence 7545555544 13457777776666655 77887 5789999999 99999987776554
No 424
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=98.93 E-value=2.2e-10 Score=110.97 Aligned_cols=121 Identities=34% Similarity=0.432 Sum_probs=96.3
Q ss_pred CCceEEEe-eeecCchhHHHHHHHHH----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccccc-chhhhhh
Q 042769 419 SNGTVVYE-GIYEGRPVAVKRLVRAL----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCTC-SLDDLIQ 492 (549)
Q Consensus 419 ~fG~V~~~-~~~~g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~G-sL~~~L~ 492 (549)
+||.||.. ...+|+.+|+|++.... .+.+.+|++.+..+ +|+||+++++++......++++|++.+ +|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 47887774 44468899999887432 35667888666555 999999999999998999999999986 9999987
Q ss_pred hcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 493 TYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 493 ~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
. ...++...+..++.++ +.|||+.+++|+||+ +++.+|......+.++
T Consensus 80 ~------~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~ 134 (244)
T smart00220 80 K------RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLA 134 (244)
T ss_pred h------ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccce
Confidence 6 2237888888888888 889999999999999 7777777666655544
No 425
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=98.91 E-value=1.5e-09 Score=111.60 Aligned_cols=141 Identities=15% Similarity=0.139 Sum_probs=104.9
Q ss_pred eeeecccccccCCceEEEe---e--e-ecCchhHHHHHHHHHh----hhhHHHHHHHHhcCCCCCeeEEeeeccCc-ceE
Q 042769 408 LFVSNTEIAKGSNGTVVYE---G--I-YEGRPVAVKRLVRALH----DVAFKEIQNLIASDQHPNIVRWYGVENDK-DFV 476 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~---~--~-~~g~~VAVK~i~~~~~----~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~-~~~ 476 (549)
++++..++-+|.||.||+. . . .+.+.|-+|.++...+ ..++.|-..+ .-..|||+..+.+++... ...
T Consensus 285 Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~ll-y~~sH~nll~V~~V~ie~~~~P 363 (563)
T KOG1024|consen 285 RVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLL-YGASHPNLLSVLGVSIEDYATP 363 (563)
T ss_pred heechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHH-hcCcCCCccceeEEEeeccCcc
Confidence 3777889999999998773 1 1 2246788898886532 2455676444 444899999999987654 457
Q ss_pred EEEecccc-cchhhhhhhcccCC--cccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 477 YLSLERCT-CSLDDLIQTYSDSS--CNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 477 yLVmE~~~-GsL~~~L~~~~~~~--~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
+.++.+++ |+|..|++.|+... ..+.++..+...++.|+ ++|||..+|||.||- ++|..-+.++-+-.|.
T Consensus 364 ~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLS 443 (563)
T KOG1024|consen 364 FVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALS 443 (563)
T ss_pred eEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhc
Confidence 78888887 89999999766332 33457777788888898 899999999999998 7887766666677777
Q ss_pred hcC
Q 042769 547 RLV 549 (549)
Q Consensus 547 rd~ 549 (549)
||.
T Consensus 444 RDL 446 (563)
T KOG1024|consen 444 RDL 446 (563)
T ss_pred ccc
Confidence 773
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.90 E-value=3.8e-10 Score=109.29 Aligned_cols=120 Identities=16% Similarity=0.148 Sum_probs=84.6
Q ss_pred ccccccCCceEEEeeeecCchhHHHHHHHH-----------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 413 TEIAKGSNGTVVYEGIYEGRPVAVKRLVRA-----------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 413 ~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~-----------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
+.||+|++|.||.. ...|..+++|..... ......+|+..+..+ .|++|.....++......+++||
T Consensus 2 ~~l~~G~~~~vy~~-~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLG-DFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRA-RKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEE-eeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCeEEEEeCCCCEEEEE
Confidence 57999999987664 347788888853311 122456788666554 78887766666666677899999
Q ss_pred cccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 482 RCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 482 ~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
|++| +|.+++... . . ....++.++ |.+||+.+++|||++ |++ ++.+...++.+
T Consensus 80 ~~~G~~L~~~~~~~------~---~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~ 140 (211)
T PRK14879 80 YIEGEPLKDLINSN------G---M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGL 140 (211)
T ss_pred EeCCcCHHHHHHhc------c---H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCc
Confidence 9986 999888651 1 1 555666666 889999999999999 565 66655555443
No 427
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=98.88 E-value=6.8e-10 Score=115.48 Aligned_cols=119 Identities=23% Similarity=0.230 Sum_probs=94.3
Q ss_pred eeeecccccccCCceEEEe-eeec-CchhHHHHHHHHH---hhhhHHHHHHHHhcC---CCCCeeEEeeec-cCcceEEE
Q 042769 408 LFVSNTEIAKGSNGTVVYE-GIYE-GRPVAVKRLVRAL---HDVAFKEIQNLIASD---QHPNIVRWYGVE-NDKDFVYL 478 (549)
Q Consensus 408 ~y~~~~~LG~G~fG~V~~~-~~~~-g~~VAVK~i~~~~---~~~~~~Ei~~L~~~l---~HpNIVrl~g~~-~~~~~~yL 478 (549)
.|.+.+.||+|+||.||.. ...+ ...+|+|...... ...+..|...+..+. ..+++.++++.. ....+-||
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 4999999999999998884 3333 3578888655431 114667776666653 236889999888 58889999
Q ss_pred EecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc
Q 042769 479 SLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 479 VmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
||+++..+|.++...+. .+.++...+.+++.|+ |++||+.|++|||||
T Consensus 99 VM~l~G~sL~dl~~~~~----~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiK 149 (322)
T KOG1164|consen 99 VMSLLGPSLEDLRKRNP----PGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIK 149 (322)
T ss_pred EEeccCccHHHHHHhCC----CCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcC
Confidence 99999889999876632 4679999999999999 889999999999999
No 428
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=98.87 E-value=2.4e-10 Score=120.85 Aligned_cols=130 Identities=18% Similarity=0.224 Sum_probs=107.7
Q ss_pred ccceeeeeecccccccCCceEEEe-eeecCchhHHHHHHHH--HhhhhHHHHHHHHhcCC-----CCCeeEEeeeccCcc
Q 042769 403 RNVGKLFVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA--LHDVAFKEIQNLIASDQ-----HPNIVRWYGVENDKD 474 (549)
Q Consensus 403 ~~igk~y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~--~~~~~~~Ei~~L~~~l~-----HpNIVrl~g~~~~~~ 474 (549)
..+..+|.+....|+|-|++|+.+ +...|+.||||+|... .....++|+++|.++.. --|+++|+..|...+
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn 507 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN 507 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc
Confidence 445566999999999999999884 7777899999999854 44567789988766531 237899999999999
Q ss_pred eEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccC
Q 042769 475 FVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKAD 535 (549)
Q Consensus 475 ~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~ 535 (549)
++|||+|-+.-+|.+.|++++ .+-+|....++.|+.|+ |..|-.++|+|.||| |+++.
T Consensus 508 HLClVFE~LslNLRevLKKyG---~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~ 572 (752)
T KOG0670|consen 508 HLCLVFEPLSLNLREVLKKYG---RNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNES 572 (752)
T ss_pred eeEEEehhhhchHHHHHHHhC---cccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccC
Confidence 999999999999999999865 35678889999999999 778999999999999 55543
No 429
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.86 E-value=9.9e-10 Score=107.94 Aligned_cols=100 Identities=19% Similarity=0.319 Sum_probs=77.6
Q ss_pred Ccchhhhccc-cccccCCcchhhhhhcCC--CcccccceeecceeeEEEEEEccccceeeecCCCCCCccccchhhhccc
Q 042769 41 EDWGLYAHGL-LGRMKLPQSIDDYVKTAP--HITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEEQKSAS 117 (549)
Q Consensus 41 ~d~~ly~~~~-~g~~~~~~~~~~~v~~sP--~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~~~~~~~ 117 (549)
|+|.|+++|+ +|++.|.+.+++-...-+ .+..+|.||+++.++.+|++|++||+++|++..++...
T Consensus 1 ~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~----------- 69 (238)
T PF13360_consen 1 DDGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPIS----------- 69 (238)
T ss_dssp -TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGG-----------
T ss_pred CCCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeecccccc-----------
Confidence 5899999999 999999998744232222 23249999999999999999999999999998854100
Q ss_pred ccccccchHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCceeeee
Q 042769 118 YKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVSWSMT 171 (549)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~Wn~~ 171 (549)
..+.. ..+.||++..|+.|+++|.++|+++|.+.
T Consensus 70 ----------------~~~~~----~~~~v~v~~~~~~l~~~d~~tG~~~W~~~ 103 (238)
T PF13360_consen 70 ----------------GAPVV----DGGRVYVGTSDGSLYALDAKTGKVLWSIY 103 (238)
T ss_dssp ----------------SGEEE----ETTEEEEEETTSEEEEEETTTSCEEEEEE
T ss_pred ----------------ceeee----cccccccccceeeeEecccCCcceeeeec
Confidence 01111 12789999999999999999999999963
No 430
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.83 E-value=7.1e-10 Score=106.49 Aligned_cols=117 Identities=18% Similarity=0.174 Sum_probs=78.0
Q ss_pred cccccCCceEEEeeeecCchhHHHHHHHH-----------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecc
Q 042769 414 EIAKGSNGTVVYEGIYEGRPVAVKRLVRA-----------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLER 482 (549)
Q Consensus 414 ~LG~G~fG~V~~~~~~~g~~VAVK~i~~~-----------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~ 482 (549)
.||+|+||.||.. ..+|..+++|..... ...+..+|+..+..+ .|+++.....++......+++|||
T Consensus 1 ~ig~G~~~~vy~~-~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLG-DFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRA-RKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEe-ecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEECCCCEEEEEE
Confidence 4899999987664 367888888864321 123455788666554 666544333333445567899999
Q ss_pred ccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 483 CTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 483 ~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
++| +|.+++.. ... .++.|+ |.+||+.+++|||++ |++ ++.+...++.++
T Consensus 79 ~~g~~l~~~~~~------~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a 136 (199)
T TIGR03724 79 IEGKPLKDVIEE------GND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLG 136 (199)
T ss_pred ECCccHHHHHhh------cHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCC
Confidence 986 89888755 111 444444 889999999999999 565 666665555443
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.83 E-value=1.5e-09 Score=120.57 Aligned_cols=122 Identities=16% Similarity=0.173 Sum_probs=85.9
Q ss_pred eeecccccccCCceEEEeeeecCchhHHHHH----------HH-HHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEE
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRL----------VR-ALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVY 477 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i----------~~-~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~y 477 (549)
|...+.||+|+||.||+ +...++.+++|+. .. ...+...+|+..+..+ +|++|+....++......+
T Consensus 335 ~~~~~~iG~G~~g~Vy~-~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~ 412 (535)
T PRK09605 335 KIPDHLIGKGAEADIKK-GEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEA-RRAGVPTPVIYDVDPEEKT 412 (535)
T ss_pred cCccceeccCCcEEEEE-EeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhh-cccCCCeeEEEEEeCCCCE
Confidence 45578999999999776 3344444444321 11 0123466788666554 9999988777777777789
Q ss_pred EEeccccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 478 LSLERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 478 LVmE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
+||||++| +|.+++.. ...++.|+ |.|||+.+++||||| |+ .++.+...++.+.+
T Consensus 413 lv~E~~~g~~L~~~l~~--------------~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 413 IVMEYIGGKDLKDVLEG--------------NPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred EEEEecCCCcHHHHHHH--------------HHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 99999985 99888753 23445555 899999999999999 55 67777777666654
No 432
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.81 E-value=4.4e-10 Score=108.41 Aligned_cols=122 Identities=19% Similarity=0.065 Sum_probs=84.5
Q ss_pred eeecccccccCCceEEEeeeecCchhHHHHHHHHH-------------------------hhhhHHHHHHHHhcCCCC--
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL-------------------------HDVAFKEIQNLIASDQHP-- 461 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~-------------------------~~~~~~Ei~~L~~~l~Hp-- 461 (549)
|.+.+.||+|+||.||.....+|+.||||++.... .....+|+..+.++ .|+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL-YEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH-HHcCC
Confidence 67778999999999887655579999999533210 11245677555554 555
Q ss_pred CeeEEeeeccCcceEEEEeccccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccc
Q 042769 462 NIVRWYGVENDKDFVYLSLERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWK 533 (549)
Q Consensus 462 NIVrl~g~~~~~~~~yLVmE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~ 533 (549)
.+++.++. ...+++|||++| +|..+... .....++.++ +.++|+.+|+||||| |++
T Consensus 96 ~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~------------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~ 159 (198)
T cd05144 96 PVPKPIDW----NRHAVVMEYIDGVELYRVRVL------------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVD 159 (198)
T ss_pred CCCceeec----CCceEEEEEeCCcchhhcccc------------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEc
Confidence 44455443 345899999986 77654321 2233444555 789999999999999 788
Q ss_pred cCCCCchhhhhhhh
Q 042769 534 ADGHPSPLLLSLMR 547 (549)
Q Consensus 534 ~~G~p~~~l~~Lmr 547 (549)
.++.+.+..+.+|+
T Consensus 160 ~~~~~~liDfg~~~ 173 (198)
T cd05144 160 DDEKIYIIDWPQMV 173 (198)
T ss_pred CCCcEEEEECCccc
Confidence 89989888887774
No 433
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.81 E-value=5.6e-09 Score=102.06 Aligned_cols=141 Identities=19% Similarity=0.160 Sum_probs=116.0
Q ss_pred CceeccCCCccccccccceeeeeccccccccccceeeecCCcchhhhccc-cccccCCcchhhhhhcCCCcccc-cceee
Q 042769 1 VSWTFGTGTPIYSSYQAPVQATVDQDNASELTNSFFIDCGEDWGLYAHGL-LGRMKLPQSIDDYVKTAPHITEE-GAVTL 78 (549)
Q Consensus 1 ~~W~f~tg~~i~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~~v~~sP~~~~d-g~v~~ 78 (549)
++|.---|..|.+| +.+-.+++..|-..|.||.++- +|.+-|.|.+.+-|...|....| |.+|.
T Consensus 45 ~~We~ilg~RiE~s--------------a~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIyc 110 (354)
T KOG4649|consen 45 LIWEAILGVRIECS--------------AIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYC 110 (354)
T ss_pred EEeehhhCceeeee--------------eEEECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEE
Confidence 47888889999999 7788888777779999999999 99999999999999999988766 58999
Q ss_pred cceeeEEEEEEccccceeeecCCCCCCccccchhhhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeec
Q 042769 79 GSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQS 158 (549)
Q Consensus 79 Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a 158 (549)
||.|+++||+|++|-.-+|+-+-++..- ++|. +++. ++-||+..+.+.|-|
T Consensus 111 gshd~~~yalD~~~~~cVykskcgG~~f----------------------~sP~-i~~g------~~sly~a~t~G~vla 161 (354)
T KOG4649|consen 111 GSHDGNFYALDPKTYGCVYKSKCGGGTF----------------------VSPV-IAPG------DGSLYAAITAGAVLA 161 (354)
T ss_pred ecCCCcEEEecccccceEEecccCCcee----------------------ccce-ecCC------CceEEEEeccceEEE
Confidence 9999999999999999999977665210 1111 1211 278999999999999
Q ss_pred ccCCCC--Cceeeeeeehhhhhh-hcccc
Q 042769 159 FEPNSD--NVSWSMTVAEIGYAF-LCQDF 184 (549)
Q Consensus 159 ~d~~~g--~~~Wn~~~~~~~a~~-~~~~~ 184 (549)
+.++++ .+.|.++.+.-.-++ +|...
T Consensus 162 vt~~~~~~~~~w~~~~~~PiF~splcv~~ 190 (354)
T KOG4649|consen 162 VTKNPYSSTEFWAATRFGPIFASPLCVGS 190 (354)
T ss_pred EccCCCCcceehhhhcCCccccCceeccc
Confidence 999999 999999988776555 66653
No 434
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.71 E-value=1.7e-09 Score=124.47 Aligned_cols=127 Identities=21% Similarity=0.158 Sum_probs=93.9
Q ss_pred cCcCCccceeeeeecccccccCCceEEEeeeecCchhHHHHHHHHHhhhh--HHHHHHHHhcCCCCCeeEEeeeccCcce
Q 042769 398 GGAQGRNVGKLFVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVA--FKEIQNLIASDQHPNIVRWYGVENDKDF 475 (549)
Q Consensus 398 ~~~~~~~igk~y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~~~~~--~~Ei~~L~~~l~HpNIVrl~g~~~~~~~ 475 (549)
...+...-+..|.+.+.||+|+||+||++...+|+.||+|.=++.....+ ..++..-++..--+.|.++..++...+.
T Consensus 689 ~~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~ 768 (974)
T KOG1166|consen 689 PNTEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNA 768 (974)
T ss_pred ccceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence 33444555677999999999999999996555599999997665432211 1122110111123456677777777888
Q ss_pred EEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc
Q 042769 476 VYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 476 ~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
-+||+||.+ |+|.+++.. .+.+++..+..+..|+ +++||.++|||+|||
T Consensus 769 S~lv~ey~~~Gtlld~~N~------~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiK 821 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLINT------NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIK 821 (974)
T ss_pred ceeeeeccccccHHHhhcc------CCCCCchhhhHHHHHHHHHHHHHHhcceecccCC
Confidence 899999998 899999985 6678888899998888 889999999999999
No 435
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.59 E-value=7.6e-09 Score=98.22 Aligned_cols=124 Identities=19% Similarity=0.113 Sum_probs=78.8
Q ss_pred cccccccCCceEEEeeeecCchhHHHHHHHHHh-----hh----------------------hHHHHHHHHhcCCC-CCe
Q 042769 412 NTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALH-----DV----------------------AFKEIQNLIASDQH-PNI 463 (549)
Q Consensus 412 ~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~~-----~~----------------------~~~Ei~~L~~~l~H-pNI 463 (549)
.+.||+|+||.||.+...+|+.||||++..... .. ...|...+.....+ ..+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 468999999999886445799999996653210 00 12344333333222 234
Q ss_pred eEEeeeccCcceEEEEeccccc-chh-hhhhhcccCCcccccCchhhhHHhhhe---eecccc-eeEEEeecc----ccc
Q 042769 464 VRWYGVENDKDFVYLSLERCTC-SLD-DLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDS-VKVIIRDLS----LWK 533 (549)
Q Consensus 464 Vrl~g~~~~~~~~yLVmE~~~G-sL~-~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~-~~IIHRDLK----Ll~ 533 (549)
.+.+++. ..+++|||++| .+. ..+.... . ...+..++.++ +.++|. .+|+||||| +++
T Consensus 82 ~~~~~~~----~~~lv~e~~~g~~~~~~~l~~~~-------~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDLN----RHVLVMEFIGGDGIPAPRLKDVR-------L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD 149 (187)
T ss_pred CceEecC----CCEEEEEEeCCCCccChhhhhhh-------h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE
Confidence 4444432 35899999986 332 2232210 1 15566777777 789998 999999999 666
Q ss_pred cCCCCchhhhhhhhc
Q 042769 534 ADGHPSPLLLSLMRL 548 (549)
Q Consensus 534 ~~G~p~~~l~~Lmrd 548 (549)
++.+....+.+|+.
T Consensus 150 -~~~~~liDfg~a~~ 163 (187)
T cd05119 150 -DGKVYIIDVPQAVE 163 (187)
T ss_pred -CCcEEEEECccccc
Confidence 88888888877764
No 436
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=98.59 E-value=3.6e-08 Score=97.65 Aligned_cols=131 Identities=29% Similarity=0.381 Sum_probs=95.6
Q ss_pred eeecccccccCCceEEEeeeecCchhHHHHHHHHH------hhhhHHHHHHHHhcCCCC-CeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL------HDVAFKEIQNLIASDQHP-NIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~------~~~~~~Ei~~L~~~l~Hp-NIVrl~g~~~~~~~~yLVmE 481 (549)
|.+...||.|+||.||..... ..+|+|.+.... ...+.+|+..+..+ .|+ +|+++++++......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASL-NHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHc-cCCcceeeEEEEEecCCEEEEEEe
Confidence 567789999999887664322 667777666432 33466777655555 666 89999999987777899999
Q ss_pred cccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCC-CCchhhhhh
Q 042769 482 RCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADG-HPSPLLLSL 545 (549)
Q Consensus 482 ~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G-~p~~~l~~L 545 (549)
++.| +|.+++...... ..+.......++.|+ +.|+|..+++|||+| |++.++ ......+.+
T Consensus 79 ~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~ 148 (384)
T COG0515 79 YVDGGSLEDLLKKIGRK---GPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGL 148 (384)
T ss_pred cCCCCcHHHHHHhcccc---cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCc
Confidence 9985 888777652100 268888999999999 679999999999999 666666 344444443
No 437
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.56 E-value=1.3e-08 Score=101.49 Aligned_cols=93 Identities=20% Similarity=0.177 Sum_probs=62.5
Q ss_pred hhhHHHHHHHHhcCCCCCe--eEEeeeccCc-ce---EEEEeccccc--chhhhhhhcccCCcccccCchhhhHHhhhee
Q 042769 445 DVAFKEIQNLIASDQHPNI--VRWYGVENDK-DF---VYLSLERCTC--SLDDLIQTYSDSSCNSVFGEDQATRAMIEYK 516 (549)
Q Consensus 445 ~~~~~Ei~~L~~~l~HpNI--Vrl~g~~~~~-~~---~yLVmE~~~G--sL~~~L~~~~~~~~~~~l~~~~~~~i~~qiL 516 (549)
..+.+|+..+..+ +|++| ++.+++.... .. .++|||+++| +|.+++.. ..+++..... +.+.|
T Consensus 85 ~r~~rE~~ll~~L-~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~-------~~l~~~~~~~-i~~~l 155 (239)
T PRK01723 85 TRAFAEFRLLAQL-YEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQE-------APLSEEQWQA-IGQLI 155 (239)
T ss_pred hHHHHHHHHHHHH-HhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhc-------CCCCHHHHHH-HHHHH
Confidence 3567888665554 77664 6677664332 22 3599999985 88888754 2344443222 23348
Q ss_pred ecccceeEEEeecc----ccccCCCCchhhhhhh
Q 042769 517 LRLDSVKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 517 ~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
.+||++||+||||| |++.+|.+.+.++..|
T Consensus 156 ~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 156 ARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred HHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 99999999999999 7888887666666654
No 438
>COG4993 Gcd Glucose dehydrogenase [Carbohydrate transport and metabolism]
Probab=98.51 E-value=1.6e-07 Score=101.30 Aligned_cols=157 Identities=12% Similarity=0.160 Sum_probs=104.7
Q ss_pred ceeccCCCccccccccceeeeeccccccccccceeeecCCcchhhhccc-cccccCCcchhhhhh---------------
Q 042769 2 SWTFGTGTPIYSSYQAPVQATVDQDNASELTNSFFIDCGEDWGLYAHGL-LGRMKLPQSIDDYVK--------------- 65 (549)
Q Consensus 2 ~W~f~tg~~i~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~~v~--------------- 65 (549)
-|+|+||+-=-+- -....+.++-|-...+.+|.|.--..+||+|+ +|++||+|....--.
T Consensus 187 AWty~TGD~k~~~----d~~e~t~e~tPLkvgdtlYvcTphn~v~ALDa~TGkekWkydp~~~~nv~~~~~tCrgVsy~~ 262 (773)
T COG4993 187 AWTYRTGDVKQPE----DPGETTNEVTPLKVGDTLYVCTPHNRVFALDAATGKEKWKYDPNLKSNVDPQHQTCRGVSYGA 262 (773)
T ss_pred eEEEecCcccCCC----CcccccccccceEECCEEEEecCcceeEEeeccCCceeeecCCCCCCCcccccccccceeccc
Confidence 4999999832211 11111223347777888899989999999999 999999998743222
Q ss_pred -----cCCCcccccceeecceeeEEEEEEccccceeeecCCCCCCccccchhhhcccccccccchHHHHhhccCcccccc
Q 042769 66 -----TAPHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEEQKSASYKHDKVNNEQLVKSGLTNTAELQ 140 (549)
Q Consensus 66 -----~sP~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (549)
.|||-. .||++--|.++.|+||+||+..|+|...++.+...+=.....++. ..++++++.
T Consensus 263 a~a~~k~pc~~---rIflpt~DarlIALdA~tGkvc~~Fa~~Ga~~l~tgm~~~k~g~y------------~~tS~p~~~ 327 (773)
T COG4993 263 AKADAKSPCPR---RIFLPTADARLIALDADTGKVCWSFANKGALNLETGMKDTKDGLY------------YGTSPPEFG 327 (773)
T ss_pred ccccccCCCce---eEEeecCCceEEEEeCCCCcEeheeccCceeeeeccCCCCCCCeE------------eecCCCccc
Confidence 245444 499999999999999999999999998774432221000100000 123444441
Q ss_pred ccCceEEEEEc----------ccceeecccCCCCCceeeeeeehhhhhhh
Q 042769 141 HKEPYLLFITR----------TDYTLQSFEPNSDNVSWSMTVAEIGYAFL 180 (549)
Q Consensus 141 ~~~~~~v~i~r----------~d~~l~a~d~~~g~~~Wn~~~~~~~a~~~ 180 (549)
...++|++ .-+.++++|-.+|++.|++..+.-.-..+
T Consensus 328 ---~~~~v~~g~v~Dn~st~e~sgVir~fdv~tG~l~w~~D~gnpD~t~p 374 (773)
T COG4993 328 ---VKGIVIAGSVADNESTWEPSGVIRGFDVLTGKLTWAGDPGNPDPTAP 374 (773)
T ss_pred ---ceeEEEeeccCCCceeeccCccccccccccCceEEccCCCCCCCCCC
Confidence 24455553 34678999999999999999987764443
No 439
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=98.43 E-value=5.9e-08 Score=86.96 Aligned_cols=124 Identities=13% Similarity=0.092 Sum_probs=81.4
Q ss_pred cccccccCCceEEEeeeecCchhHHHHHHHHH-hhhhHHHHHHHHhcCCC-CCeeEEeeeccCcceEEEEeccccc-chh
Q 042769 412 NTEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL-HDVAFKEIQNLIASDQH-PNIVRWYGVENDKDFVYLSLERCTC-SLD 488 (549)
Q Consensus 412 ~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~-~~~~~~Ei~~L~~~l~H-pNIVrl~g~~~~~~~~yLVmE~~~G-sL~ 488 (549)
.+.||+|.++.||.... .+..+++|...... .....+|+..+..+-++ .++++++.++...+..+++|||+.| .+.
T Consensus 3 ~~~i~~g~~~~v~~~~~-~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~ 81 (155)
T cd05120 3 IKLLKGGLTNRVYLLGT-KDEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLD 81 (155)
T ss_pred ceecccccccceEEEEe-cCCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence 46799999998776433 34778888776432 23566788666555333 6899999988888889999999986 554
Q ss_pred hhhhhcccCCcccccCchhhhHHhhheeecccc---eeEEEeecc----ccccCCCCchhhhhhh
Q 042769 489 DLIQTYSDSSCNSVFGEDQATRAMIEYKLRLDS---VKVIIRDLS----LWKADGHPSPLLLSLM 546 (549)
Q Consensus 489 ~~L~~~~~~~~~~~l~~~~~~~i~~qiL~yLH~---~~IIHRDLK----Ll~~~G~p~~~l~~Lm 546 (549)
.+ .. .........+.+.+.+||. .+++|+|++ |++..+......+.++
T Consensus 82 ~~-~~---------~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~ 136 (155)
T cd05120 82 EV-SE---------EEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYA 136 (155)
T ss_pred cC-CH---------HHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccc
Confidence 33 11 0111122223333778886 589999999 6666566655555444
No 440
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.31 E-value=1.6e-07 Score=101.83 Aligned_cols=131 Identities=17% Similarity=0.088 Sum_probs=80.2
Q ss_pred cccccccCCceEEEeeeecCchhHHHHHHHHHhh-------------------------------------------hhH
Q 042769 412 NTEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHD-------------------------------------------VAF 448 (549)
Q Consensus 412 ~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~~~-------------------------------------------~~~ 448 (549)
.+.||.|++|.||.+...+|+.||||+..+...+ .+.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 3579999999999887778999999965431000 122
Q ss_pred HHHHHHHh---cCCCCCeeEEeeecc-CcceEEEEeccccc-chhhhhhhcccCCcccccCchhhh-HHhhheeecccce
Q 042769 449 KEIQNLIA---SDQHPNIVRWYGVEN-DKDFVYLSLERCTC-SLDDLIQTYSDSSCNSVFGEDQAT-RAMIEYKLRLDSV 522 (549)
Q Consensus 449 ~Ei~~L~~---~l~HpNIVrl~g~~~-~~~~~yLVmE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~-~i~~qiL~yLH~~ 522 (549)
+|..++.. ..+|.+-+.+-.++. .....+|||||++| +|.++..... .......+. .++..++..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-----~~~~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-----AGLDRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-----cCCCHHHHHHHHHHHHHHHHHhC
Confidence 33333222 223333333333332 23457899999987 8888765311 111112222 2222236778999
Q ss_pred eEEEeecc----ccccCCCCchhhhhhhh
Q 042769 523 KVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 523 ~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|++|+|++ +++.+|.....++++++
T Consensus 277 g~~H~D~hPgNilv~~~g~i~liDfG~~~ 305 (437)
T TIGR01982 277 GFFHADLHPGNIFVLKDGKIIALDFGIVG 305 (437)
T ss_pred CceeCCCCcccEEECCCCcEEEEeCCCee
Confidence 99999999 78888888777777665
No 441
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=98.19 E-value=4.1e-07 Score=64.75 Aligned_cols=40 Identities=20% Similarity=0.415 Sum_probs=29.7
Q ss_pred ccccCCcchhhhhhcCCCcccccceeecceeeEEEEEEccc
Q 042769 52 GRMKLPQSIDDYVKTAPHITEEGAVTLGSKTTTVFVLEAKT 92 (549)
Q Consensus 52 g~~~~~~~~~~~v~~sP~~~~dg~v~~Gsk~~~~~~vda~t 92 (549)
|+++|.++++..+.++|++. ||.||+|+.++++||+|++|
T Consensus 1 G~~~W~~~~~~~~~~~~~v~-~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 1 GKVLWSYDTGGPIWSSPAVA-GGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp S-EEEEEE-SS---S--EEC-TSEEEEE-TTSEEEEEETT-
T ss_pred CceeEEEECCCCcCcCCEEE-CCEEEEEcCCCEEEEEeCCC
Confidence 68899999999999999999 99999999999999999986
No 442
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.08 E-value=4.6e-07 Score=105.49 Aligned_cols=73 Identities=12% Similarity=0.128 Sum_probs=58.3
Q ss_pred CC-CCeeEEeeec-------cCcceEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEe
Q 042769 459 QH-PNIVRWYGVE-------NDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIR 527 (549)
Q Consensus 459 ~H-pNIVrl~g~~-------~~~~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHR 527 (549)
+| +||.++++.| ...+.++++||++.++|.++|.. ....+++..++.++.|| |.|||+++||||
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~-----~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHr 104 (793)
T PLN00181 30 SHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDN-----PDRSVDAFECFHVFRQIVEIVNAAHSQGIVVH 104 (793)
T ss_pred hHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhc-----ccccccHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 55 5777777776 33346788999998999999975 13458999999999999 889999999999
Q ss_pred ecc----ccccCC
Q 042769 528 DLS----LWKADG 536 (549)
Q Consensus 528 DLK----Ll~~~G 536 (549)
||| |++..|
T Consensus 105 DlKP~NiLl~~~~ 117 (793)
T PLN00181 105 NVRPSCFVMSSFN 117 (793)
T ss_pred cCCchhEEEcccC
Confidence 999 665433
No 443
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=98.08 E-value=5.2e-07 Score=98.39 Aligned_cols=128 Identities=22% Similarity=0.205 Sum_probs=99.1
Q ss_pred cccccCCceEEEe----eeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccc
Q 042769 414 EIAKGSNGTVVYE----GIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCT 484 (549)
Q Consensus 414 ~LG~G~fG~V~~~----~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~ 484 (549)
++|+|+||.|++. +...|..+|+|.+++.. ......|-..+....+||.+|++...++.+...++++++..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 4799999998763 34557899999887641 11233454455566569999999999999999999999997
Q ss_pred c-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 485 C-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 485 G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
| +|...+.. ...+.+.....+...+ ++++|+.+|+|||+| +++.+||.....++|-|
T Consensus 81 gg~lft~l~~------~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglsk 145 (612)
T KOG0603|consen 81 GGDLFTRLSK------EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSK 145 (612)
T ss_pred cchhhhcccc------CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhh
Confidence 4 88887766 4556677776666666 789999999999997 89999998877776643
No 444
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.06 E-value=3.9e-07 Score=100.69 Aligned_cols=134 Identities=16% Similarity=0.124 Sum_probs=76.5
Q ss_pred eeecccccccCCceEEEeeeec-CchhHHHHHHHHHh-------------------------------------hh----
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYE-GRPVAVKRLVRALH-------------------------------------DV---- 446 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~-g~~VAVK~i~~~~~-------------------------------------~~---- 446 (549)
|+. +.||+|++|+||.+...+ |+.||||++.+... ..
T Consensus 122 fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~E 200 (537)
T PRK04750 122 FDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDE 200 (537)
T ss_pred cCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHh
Confidence 554 689999999998865554 99999996653210 01
Q ss_pred --hHHHHHHHHh---cCCCCCeeEEeeeccC-cceEEEEeccccc-chhhhhhhcccCCcccccCchhhhHHhhheeecc
Q 042769 447 --AFKEIQNLIA---SDQHPNIVRWYGVEND-KDFVYLSLERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEYKLRL 519 (549)
Q Consensus 447 --~~~Ei~~L~~---~l~HpNIVrl~g~~~~-~~~~yLVmE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qiL~yL 519 (549)
+.+|..++.+ ...+.+.+.+-.++.+ ....+||||||.| .|.++-.-.........+.+..+..++.|+
T Consensus 201 lD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi---- 276 (537)
T PRK04750 201 LDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV---- 276 (537)
T ss_pred hCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH----
Confidence 1233322222 2234444444333332 3456799999987 786642210000011134444455555554
Q ss_pred cceeEEEeecc----ccccCC----CCchhhhhhhh
Q 042769 520 DSVKVIIRDLS----LWKADG----HPSPLLLSLMR 547 (549)
Q Consensus 520 H~~~IIHRDLK----Ll~~~G----~p~~~l~~Lmr 547 (549)
...|++|+|+| +++.+| .-..+++++|.
T Consensus 277 f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg 312 (537)
T PRK04750 277 FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVG 312 (537)
T ss_pred HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEE
Confidence 46899999999 777777 44445555554
No 445
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.02 E-value=1.3e-06 Score=98.07 Aligned_cols=122 Identities=20% Similarity=0.219 Sum_probs=88.4
Q ss_pred ecccccccCCceEEEe-eeecCchhHHHHHH----HH-----HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEe
Q 042769 411 SNTEIAKGSNGTVVYE-GIYEGRPVAVKRLV----RA-----LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 411 ~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~----~~-----~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVm 480 (549)
....+|.|++|.|+.. .......++.|... .. .......|+ .+-..+.|||++..+..+......+-.|
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~-~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEF-CIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhhe-eecccccCCchhhhHHHHhhcccchhhh
Confidence 4679999999965543 33334445555433 11 111133454 3445669999998888888777777779
Q ss_pred cccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCc
Q 042769 481 ERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPS 539 (549)
Q Consensus 481 E~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~ 539 (549)
|||+++|+.++.. ...++...+..++.|+ ++|||..||.|||+| |+..+|.-+
T Consensus 401 E~~~~Dlf~~~~~------~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lk 460 (601)
T KOG0590|consen 401 EYCPYDLFSLVMS------NGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILK 460 (601)
T ss_pred hcccHHHHHHHhc------ccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceE
Confidence 9999899999977 4568889999999999 699999999999999 667777433
No 446
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=97.99 E-value=5.3e-06 Score=58.41 Aligned_cols=30 Identities=27% Similarity=0.566 Sum_probs=28.2
Q ss_pred cceeecceeeEEEEEEccccceeeecCCCC
Q 042769 74 GAVTLGSKTTTVFVLEAKTGRLIRTYGSPH 103 (549)
Q Consensus 74 g~v~~Gsk~~~~~~vda~tG~~~~~~~~~~ 103 (549)
|.||+|+.++.+||+|++||+++|+|....
T Consensus 1 ~~v~~~~~~g~l~AlD~~TG~~~W~~~~~~ 30 (38)
T PF01011_consen 1 GRVYVGTPDGYLYALDAKTGKVLWKFQTGP 30 (38)
T ss_dssp TEEEEETTTSEEEEEETTTTSEEEEEESSS
T ss_pred CEEEEeCCCCEEEEEECCCCCEEEeeeCCC
Confidence 579999999999999999999999999865
No 447
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=97.94 E-value=7.7e-06 Score=55.32 Aligned_cols=32 Identities=41% Similarity=0.773 Sum_probs=29.1
Q ss_pred CCcccccceeecceeeEEEEEEccccceeeec
Q 042769 68 PHITEEGAVTLGSKTTTVFVLEAKTGRLIRTY 99 (549)
Q Consensus 68 P~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~~ 99 (549)
|++..||.||+|+.++.++|+|++||+++|++
T Consensus 1 ~~~~~~~~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 1 PVVLSDGTVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred CcEEECCEEEEEcCCCEEEEEEcccCcEEEEc
Confidence 45666899999999999999999999999986
No 448
>COG4993 Gcd Glucose dehydrogenase [Carbohydrate transport and metabolism]
Probab=97.87 E-value=2.2e-05 Score=85.20 Aligned_cols=106 Identities=21% Similarity=0.325 Sum_probs=77.6
Q ss_pred cCCcchhhh----------hhcCCCcccccceeecceeeEEEEEEccccceeeecCCCCCCcc-ccchhhhccccccccc
Q 042769 55 KLPQSIDDY----------VKTAPHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSST-LQNEEQKSASYKHDKV 123 (549)
Q Consensus 55 ~~~~~~~~~----------v~~sP~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 123 (549)
.|.|++++. -+.+|.+. ++++|+-.-..++||+||+||+++|+|.-.-.+|. .+---|...++-.+++
T Consensus 187 AWty~TGD~k~~~d~~e~t~e~tPLkv-gdtlYvcTphn~v~ALDa~TGkekWkydp~~~~nv~~~~~tCrgVsy~~a~a 265 (773)
T COG4993 187 AWTYRTGDVKQPEDPGETTNEVTPLKV-GDTLYVCTPHNRVFALDAATGKEKWKYDPNLKSNVDPQHQTCRGVSYGAAKA 265 (773)
T ss_pred eEEEecCcccCCCCcccccccccceEE-CCEEEEecCcceeEEeeccCCceeeecCCCCCCCcccccccccceecccccc
Confidence 477777552 25699999 99999999999999999999999999987654331 1211355554554332
Q ss_pred chHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCceeeeeeehhhh
Q 042769 124 NNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVSWSMTVAEIGY 177 (549)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~Wn~~~~~~~a 177 (549)
.++ .-|+ ..||+...|..|.|+|++||++-|.| ++-.+
T Consensus 266 ~~k------~pc~--------~rIflpt~DarlIALdA~tGkvc~~F--a~~Ga 303 (773)
T COG4993 266 DAK------SPCP--------RRIFLPTADARLIALDADTGKVCWSF--ANKGA 303 (773)
T ss_pred ccc------CCCc--------eeEEeecCCceEEEEeCCCCcEehee--ccCce
Confidence 222 1243 68999999999999999999999996 44444
No 449
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=97.84 E-value=7e-06 Score=85.34 Aligned_cols=80 Identities=25% Similarity=0.294 Sum_probs=64.2
Q ss_pred CCCCCeeEEeeeccC---------------------------cceEEEEecccccchhhhhhhcccCCcccccCchhhhH
Q 042769 458 DQHPNIVRWYGVEND---------------------------KDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATR 510 (549)
Q Consensus 458 l~HpNIVrl~g~~~~---------------------------~~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~ 510 (549)
-+|||||+++++|.+ ...+|+||..+..+|.+|+.. ...+....+.
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~-------~~~s~r~~~~ 345 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWT-------RHRSYRTGRV 345 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhc-------CCCchHHHHH
Confidence 489999999998642 235899999999999999986 3456666777
Q ss_pred Hhhhe---eecccceeEEEeecc----c--cccCCCCchhhhh
Q 042769 511 AMIEY---KLRLDSVKVIIRDLS----L--WKADGHPSPLLLS 544 (549)
Q Consensus 511 i~~qi---L~yLH~~~IIHRDLK----L--l~~~G~p~~~l~~ 544 (549)
++.|+ +.|||.+||.|||+| | +|.|+-|..++.+
T Consensus 346 ~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaD 388 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVAD 388 (598)
T ss_pred HHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcc
Confidence 88888 669999999999999 3 4788888777543
No 450
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=97.61 E-value=1.7e-05 Score=76.87 Aligned_cols=72 Identities=14% Similarity=0.106 Sum_probs=45.4
Q ss_pred HHHHHHHHhcCCC-CCeeEEeeeccCcceEEEEecccccc-hh-hhhhhcccCCcccccCchhhhHHhhhe---eecc-c
Q 042769 448 FKEIQNLIASDQH-PNIVRWYGVENDKDFVYLSLERCTCS-LD-DLIQTYSDSSCNSVFGEDQATRAMIEY---KLRL-D 520 (549)
Q Consensus 448 ~~Ei~~L~~~l~H-pNIVrl~g~~~~~~~~yLVmE~~~Gs-L~-~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yL-H 520 (549)
.+|+..|.++-.. -++.+.+++ ..-+|||||+.|+ +. ..++. ..+++.....+..++ |..| |
T Consensus 74 ~kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd-------~~~~~~~~~~i~~~i~~~l~~l~H 142 (197)
T cd05146 74 EKEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD-------AKLNDEEMKNAYYQVLSMMKQLYK 142 (197)
T ss_pred HHHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc-------cccCHHHHHHHHHHHHHHHHHHHH
Confidence 4788777765433 456666654 3467999999863 32 22322 123344455555566 5566 8
Q ss_pred ceeEEEeecc
Q 042769 521 SVKVIIRDLS 530 (549)
Q Consensus 521 ~~~IIHRDLK 530 (549)
..++||+||+
T Consensus 143 ~~glVHGDLs 152 (197)
T cd05146 143 ECNLVHADLS 152 (197)
T ss_pred hCCeecCCCC
Confidence 9999999999
No 451
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=97.60 E-value=5.5e-05 Score=53.20 Aligned_cols=33 Identities=12% Similarity=0.219 Sum_probs=29.4
Q ss_pred eEEEEEcccceeecccCCCCCceeeeeeehhhh
Q 042769 145 YLLFITRTDYTLQSFEPNSDNVSWSMTVAEIGY 177 (549)
Q Consensus 145 ~~v~i~r~d~~l~a~d~~~g~~~Wn~~~~~~~a 177 (549)
+.||++..|+.|+|+|++||+++|.+..+....
T Consensus 1 ~~v~~~~~~g~l~AlD~~TG~~~W~~~~~~~~~ 33 (38)
T PF01011_consen 1 GRVYVGTPDGYLYALDAKTGKVLWKFQTGPPVD 33 (38)
T ss_dssp TEEEEETTTSEEEEEETTTTSEEEEEESSSGGG
T ss_pred CEEEEeCCCCEEEEEECCCCCEEEeeeCCCCCc
Confidence 379999999999999999999999998876553
No 452
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=97.51 E-value=3.6e-05 Score=76.51 Aligned_cols=108 Identities=20% Similarity=0.242 Sum_probs=84.9
Q ss_pred eeecccccccCCceEEEeeeecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccc
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERC 483 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~ 483 (549)
..+..+|.....|+ .+++++.|..+++|++.... +..+..|+-. ++...||||+.+++.|.....+.++..||
T Consensus 192 lnl~tkl~e~hsge-lwrgrwqgndivakil~vr~~t~risrdfneefp~-lrifshpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 192 LNLITKLAESHSGE-LWRGRWQGNDIVAKILNVREVTARISRDFNEEFPA-LRIFSHPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhhccCCCcc-cccccccCcchhhhhhhhhhcchhhcchhhhhCcc-eeeecCCchhhhhhhccCCCCceEeeeec
Confidence 44456788888887 56788999999999888532 2234455533 45669999999999999999999999999
Q ss_pred c-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccce
Q 042769 484 T-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSV 522 (549)
Q Consensus 484 ~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~ 522 (549)
+ |+|+..++... .-..+..++.++++.+ ++|||+.
T Consensus 270 p~gslynvlhe~t----~vvvd~sqav~faldiargmaflhsl 308 (448)
T KOG0195|consen 270 PFGSLYNVLHEQT----SVVVDHSQAVRFALDIARGMAFLHSL 308 (448)
T ss_pred cchHHHHHHhcCc----cEEEecchHHHHHHHHHhhHHHHhhc
Confidence 8 89999998833 4467888899999888 8888864
No 453
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=97.49 E-value=2.2e-05 Score=72.91 Aligned_cols=117 Identities=14% Similarity=0.014 Sum_probs=69.5
Q ss_pred ccccccCCceEEEeeeecCchhHHHHHHHHH--hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccccc-chhh
Q 042769 413 TEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL--HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCTC-SLDD 489 (549)
Q Consensus 413 ~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~--~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~G-sL~~ 489 (549)
+.|+.|.++.||... ..++.+++|...... .....+|+..+..+.+...+.+++.+... ..++|||+++| ++.+
T Consensus 4 ~~l~~G~~~~vy~~~-~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~--~~~lv~e~i~G~~l~~ 80 (170)
T cd05151 4 SPLKGGMTNKNYRVE-VANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPE--TGVLITEFIEGSELLT 80 (170)
T ss_pred eecCCcccCceEEEE-ECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCC--CCeEEEEecCCCcccc
Confidence 568889999877633 347789999765432 12346777665554223334456665433 34799999987 6643
Q ss_pred hhhhcccCCcccccCchhhhHHhhheeeccccee-----EEEeecc----ccccCCCCchhhhh
Q 042769 490 LIQTYSDSSCNSVFGEDQATRAMIEYKLRLDSVK-----VIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 490 ~L~~~~~~~~~~~l~~~~~~~i~~qiL~yLH~~~-----IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
. . ........-+.+.|..||..+ ++|+|++ +++ ++.....++.
T Consensus 81 ~--~---------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~ 132 (170)
T cd05151 81 E--D---------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWE 132 (170)
T ss_pred c--c---------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecc
Confidence 2 1 111122223334478899877 5999999 555 5554444333
No 454
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=97.31 E-value=6.6e-06 Score=94.62 Aligned_cols=113 Identities=18% Similarity=0.117 Sum_probs=90.1
Q ss_pred eeecccccccCCceEEEeeeecCchhHHHHHHHH-------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVRA-------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~-------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
+...+.||.+.|=+|.++....|. |+||++.+. ...+..+|++ ..+++|||.+.+.-+...+...|||-+
T Consensus 25 ~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik--~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 25 CHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK--FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred eeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH--HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 777889999999876554334454 888866653 2335556665 456699999999988888888999999
Q ss_pred ccccchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc
Q 042769 482 RCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 482 ~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
|...+|.|.|.. +.-+.+.+.+.|+.|+ |..+|..||+|+|||
T Consensus 102 yvkhnLyDRlST------RPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIK 147 (1431)
T KOG1240|consen 102 YVKHNLYDRLST------RPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIK 147 (1431)
T ss_pred HHhhhhhhhhcc------chHHHHHHHHHHHHHHHHHHHHHHHcCccccccc
Confidence 999999999876 4557778888899999 789999999999999
No 455
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.25 E-value=0.00022 Score=67.83 Aligned_cols=122 Identities=18% Similarity=0.182 Sum_probs=76.0
Q ss_pred ecccccccCCceEEEeeeecCchhHHH-HHHHH----------HhhhhHHHHHHHHhcCCCCC--eeEEeeeccCcceEE
Q 042769 411 SNTEIAKGSNGTVVYEGIYEGRPVAVK-RLVRA----------LHDVAFKEIQNLIASDQHPN--IVRWYGVENDKDFVY 477 (549)
Q Consensus 411 ~~~~LG~G~fG~V~~~~~~~g~~VAVK-~i~~~----------~~~~~~~Ei~~L~~~l~HpN--IVrl~g~~~~~~~~y 477 (549)
....|-+|+-+. +..+.+.|+.+.|| ++.+. ...+..+|...|.++ .--. ..+++ +.+...-.
T Consensus 11 ~l~likQGAEAr-v~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~-~~~GI~~P~l~--~~D~~~~~ 86 (229)
T KOG3087|consen 11 SLELIKQGAEAR-VPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKC-RALGIPAPRLI--FIDTYGGQ 86 (229)
T ss_pred cceeeeccceee-EeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHH-HHhCCCCceEE--EEecCCCe
Confidence 346788899886 34566778877776 22221 123456777665543 1112 22333 23333445
Q ss_pred EEeccccc--chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCch
Q 042769 478 LSLERCTC--SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSP 540 (549)
Q Consensus 478 LVmE~~~G--sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~ 540 (549)
|+|||.+| ++.+++...- .......-...++.++ +.-||.++|||+||- |+.++|.+.+
T Consensus 87 i~ME~~~g~~~vk~~i~~~~----~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~ 154 (229)
T KOG3087|consen 87 IYMEFIDGASTVKDFILSTM----EDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQIT 154 (229)
T ss_pred EEEEeccchhHHHHHHHHHc----cCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCc
Confidence 88999998 8999998733 2222222224555555 889999999999998 7777777664
No 456
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=97.20 E-value=0.00026 Score=47.72 Aligned_cols=27 Identities=19% Similarity=0.463 Sum_probs=25.3
Q ss_pred eEEEEEcccceeecccCCCCCceeeee
Q 042769 145 YLLFITRTDYTLQSFEPNSDNVSWSMT 171 (549)
Q Consensus 145 ~~v~i~r~d~~l~a~d~~~g~~~Wn~~ 171 (549)
+.||+++.++.|+|+|+++|+++|+++
T Consensus 7 ~~v~~~~~~g~l~a~d~~~G~~~W~~~ 33 (33)
T smart00564 7 GTVYVGSTDGTLYALDAKTGEILWTYK 33 (33)
T ss_pred CEEEEEcCCCEEEEEEcccCcEEEEcC
Confidence 689999999999999999999999863
No 457
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=97.19 E-value=0.00011 Score=52.13 Aligned_cols=36 Identities=33% Similarity=0.516 Sum_probs=26.8
Q ss_pred CceeccCCCccccccccceeeeeccccccccccceeeecCCcchhhhccc
Q 042769 1 VSWTFGTGTPIYSSYQAPVQATVDQDNASELTNSFFIDCGEDWGLYAHGL 50 (549)
Q Consensus 1 ~~W~f~tg~~i~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ly~~~~ 50 (549)
++|+++++.++.++ |++..+.+|.++.||.|||+|+
T Consensus 3 ~~W~~~~~~~~~~~--------------~~v~~g~vyv~~~dg~l~ald~ 38 (40)
T PF13570_consen 3 VLWSYDTGGPIWSS--------------PAVAGGRVYVGTGDGNLYALDA 38 (40)
T ss_dssp EEEEEE-SS---S----------------EECTSEEEEE-TTSEEEEEET
T ss_pred eeEEEECCCCcCcC--------------CEEECCEEEEEcCCCEEEEEeC
Confidence 47999999999999 8999999999999999999996
No 458
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=97.13 E-value=7e-05 Score=84.37 Aligned_cols=130 Identities=18% Similarity=0.090 Sum_probs=95.6
Q ss_pred eeecccccccCCceEEEee--eecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCC-CCCeeEEeeeccCcceEEEEe
Q 042769 409 FVSNTEIAKGSNGTVVYEG--IYEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQ-HPNIVRWYGVENDKDFVYLSL 480 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~--~~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~-HpNIVrl~g~~~~~~~~yLVm 480 (549)
|.+.+.||+|+|+.|.... ......+|+|.+.... ......|... ...+. |+|++++++.....++.++++
T Consensus 22 ~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~-~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 22 YKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDI-QKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred ccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccc-cccccccccccccCCccCCCccccccc
Confidence 7777789999999976632 2345567777665331 2233345533 33334 999999999999999999999
Q ss_pred ccccc-chhhhh-hhcccCCcccccCchhhhHHhhhe---eeccc-ceeEEEeecc----ccccCC-CCchhhhh
Q 042769 481 ERCTC-SLDDLI-QTYSDSSCNSVFGEDQATRAMIEY---KLRLD-SVKVIIRDLS----LWKADG-HPSPLLLS 544 (549)
Q Consensus 481 E~~~G-sL~~~L-~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH-~~~IIHRDLK----Ll~~~G-~p~~~l~~ 544 (549)
|+..| ++++.+ .. .....+...+.+++.|+ +.|+| ..++.|||+| +++..| ..+...+.
T Consensus 101 ~~s~g~~~f~~i~~~-----~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~ 170 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHP-----DSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFG 170 (601)
T ss_pred CcccccccccccccC-----CccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCch
Confidence 99875 898888 43 12267788889999999 89999 9999999999 778777 55544443
No 459
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=96.96 E-value=0.00013 Score=74.63 Aligned_cols=133 Identities=18% Similarity=0.122 Sum_probs=67.9
Q ss_pred eeecccccccCCceEEE-eeeecCchhHHHHHHHH------HhhhhHHHHHHHH---------------hcCCCCCeeEE
Q 042769 409 FVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRA------LHDVAFKEIQNLI---------------ASDQHPNIVRW 466 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~---------------~~l~HpNIVrl 466 (549)
+..+..||.|+++.||. .+..+|+.+|||.+... ..+...+|..... +++----++++
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 56678999999998777 57788999988743311 1112222221111 11111112222
Q ss_pred eee---ccC---cc-----eEEEEecccccchhhhhhhcccCCcccccCchhh--hHHhhhe---eecccceeEEEeecc
Q 042769 467 YGV---END---KD-----FVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQA--TRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 467 ~g~---~~~---~~-----~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~--~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
-+- +.. .. ..+++|+-+.+||.+++......... ......+ ..+..|+ +++||..|++|+|||
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~-~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQT-HSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTT-SHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred cCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccc-cchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 110 111 11 24678888888887776532111111 1122222 2333455 789999999999999
Q ss_pred ----ccccCCCCchhh
Q 042769 531 ----LWKADGHPSPLL 542 (549)
Q Consensus 531 ----Ll~~~G~p~~~l 542 (549)
+++.+|...+-.
T Consensus 173 ~~nfll~~~G~v~Lg~ 188 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGD 188 (288)
T ss_dssp GGGEEE-TTS-EEE--
T ss_pred eeeEEEcCCCCEEEcC
Confidence 888998755443
No 460
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=96.83 E-value=0.00019 Score=79.38 Aligned_cols=88 Identities=18% Similarity=0.335 Sum_probs=61.3
Q ss_pred hHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe---eeccc-ce
Q 042769 447 AFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLD-SV 522 (549)
Q Consensus 447 ~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH-~~ 522 (549)
+.+-++.|+. ++||||++++..+...+.+|||+|.+.- |..+++. +........+.|| |.||| ++
T Consensus 56 ~~~A~k~lKt-lRHP~Il~yL~t~e~~~~~ylvTErV~P-l~~~lk~---------l~~~~v~~Gl~qIl~AL~FL~~d~ 124 (690)
T KOG1243|consen 56 AKRAVKRLKT-LRHPNILSYLDTTEEEGTLYLVTERVRP-LETVLKE---------LGKEEVCLGLFQILAALSFLNDDC 124 (690)
T ss_pred HHHHHHHhhh-ccCchhhhhhhhhcccCceEEEeecccc-HHHHHHH---------hHHHHHHHHHHHHHHHHHHHhccC
Confidence 3344445544 4999999999999999999999999841 2333443 2244555566677 88997 78
Q ss_pred eEEEeecc----ccccCCCCchhhhhh
Q 042769 523 KVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 523 ~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
+++|.+|. .+++.|+=++--+.+
T Consensus 125 ~lvHgNv~~~SVfVn~~GeWkLggle~ 151 (690)
T KOG1243|consen 125 NLVHGNVCKDSVFVNESGEWKLGGLEL 151 (690)
T ss_pred CeeeccEeeeeEEEcCCCcEEEeeeEE
Confidence 99999998 567777644443333
No 461
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=96.56 E-value=0.0015 Score=66.37 Aligned_cols=85 Identities=12% Similarity=0.036 Sum_probs=52.9
Q ss_pred hhHHHHHHHHhcC----CCCCeeEEeeeccC--cceEEEEeccccc--chhhhhhhcccCCcccccCchhhhHHhhhe--
Q 042769 446 VAFKEIQNLIASD----QHPNIVRWYGVEND--KDFVYLSLERCTC--SLDDLIQTYSDSSCNSVFGEDQATRAMIEY-- 515 (549)
Q Consensus 446 ~~~~Ei~~L~~~l----~HpNIVrl~g~~~~--~~~~yLVmE~~~G--sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi-- 515 (549)
.+.+|+..+..+. .-|.+|-+...-.. ...-+||||+++| +|.+++.... ....+......++.++
T Consensus 74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~----~~~~~~~~~~~ll~~la~ 149 (268)
T PRK15123 74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWA----TNPPDPRLKRMLIKRVAT 149 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhc----ccCCCHHHHHHHHHHHHH
Confidence 3667876654432 22444433211111 2357899999986 7999886421 1223444555666666
Q ss_pred -eecccceeEEEeecc----cccc
Q 042769 516 -KLRLDSVKVIIRDLS----LWKA 534 (549)
Q Consensus 516 -L~yLH~~~IIHRDLK----Ll~~ 534 (549)
+.-||..||+|+|++ |++.
T Consensus 150 ~i~~LH~~Gi~HgDL~~~NiLl~~ 173 (268)
T PRK15123 150 MVRDMHAAGINHRDCYICHFLLHL 173 (268)
T ss_pred HHHHHHHCcCccCCCChhhEEEec
Confidence 789999999999999 6664
No 462
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.55 E-value=0.0013 Score=62.82 Aligned_cols=116 Identities=18% Similarity=0.212 Sum_probs=67.8
Q ss_pred cccccCCceEEEeeeecCchhHHH----------HHHHH-HhhhhHHHHHHHHhcCC-CCCeeEEeeeccCcceEEEEec
Q 042769 414 EIAKGSNGTVVYEGIYEGRPVAVK----------RLVRA-LHDVAFKEIQNLIASDQ-HPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 414 ~LG~G~fG~V~~~~~~~g~~VAVK----------~i~~~-~~~~~~~Ei~~L~~~l~-HpNIVrl~g~~~~~~~~yLVmE 481 (549)
.+++|+-+.++.. .+-|..+.+| .+... ...+..+|...|.+.-. --+...++++. .....|+||
T Consensus 3 ~i~~GAEa~i~~~-~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD--~~~~~I~me 79 (204)
T COG3642 3 LIKQGAEAIIYLT-DFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVD--PDNGLIVME 79 (204)
T ss_pred hhhCCcceeEEee-eccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEc--CCCCEEEEE
Confidence 5677777776543 2233333333 33322 23356678766544311 12344455554 445679999
Q ss_pred cccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc---ccccCCCCchhhhhh
Q 042769 482 RCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS---LWKADGHPSPLLLSL 545 (549)
Q Consensus 482 ~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK---Ll~~~G~p~~~l~~L 545 (549)
|.+| .|.+++.. . ...++..+ +.-||..+|+|+||. ++-..+.+-..++.|
T Consensus 80 ~I~G~~lkd~l~~------~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~i~~IDfGL 137 (204)
T COG3642 80 YIEGELLKDALEE------A-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGRIYFIDFGL 137 (204)
T ss_pred EeCChhHHHHHHh------c-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCcEEEEECCc
Confidence 9998 67778876 1 12344444 778999999999998 555555554444444
No 463
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=96.55 E-value=0.0015 Score=71.47 Aligned_cols=125 Identities=18% Similarity=0.185 Sum_probs=95.8
Q ss_pred CCccceeeeeecccccc--cCCceEEEe-e--eecCchhHHHHHHH--H---HhhhhHHHHHHHHhcCCCCCeeEEeeec
Q 042769 401 QGRNVGKLFVSNTEIAK--GSNGTVVYE-G--IYEGRPVAVKRLVR--A---LHDVAFKEIQNLIASDQHPNIVRWYGVE 470 (549)
Q Consensus 401 ~~~~igk~y~~~~~LG~--G~fG~V~~~-~--~~~g~~VAVK~i~~--~---~~~~~~~Ei~~L~~~l~HpNIVrl~g~~ 470 (549)
........|.+...+|. |.+|.++.. . ..++..+|+|+-+. . ...+-.+|+........|+|.++.+..+
T Consensus 108 ~~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~ 187 (524)
T KOG0601|consen 108 FDSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW 187 (524)
T ss_pred ccchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc
Confidence 33444555777889999 999998773 3 57789999996331 1 1223457776666777899999999999
Q ss_pred cCcceEEEEecccccchhhhhhhcccCCcccccCchhhhHHhhhe-------eecccceeEEEeecc
Q 042769 471 NDKDFVYLSLERCTCSLDDLIQTYSDSSCNSVFGEDQATRAMIEY-------KLRLDSVKVIIRDLS 530 (549)
Q Consensus 471 ~~~~~~yLVmE~~~GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi-------L~yLH~~~IIHRDLK 530 (549)
...+..|+-+|+|..+|.++... ....++...++..+.++ |.++|..+++|-|+|
T Consensus 188 e~~~~lfiqtE~~~~sl~~~~~~-----~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~k 249 (524)
T KOG0601|consen 188 EGSGILFIQTELCGESLQSYCHT-----PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLK 249 (524)
T ss_pred ccCCcceeeeccccchhHHhhhc-----ccccCCchhhhhHHhhhhhcccccccccCCCcccccccc
Confidence 99999999999999999888776 12336777777777665 679999999999999
No 464
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=96.54 E-value=0.001 Score=72.84 Aligned_cols=116 Identities=19% Similarity=0.097 Sum_probs=90.4
Q ss_pred eeecccccccCCceEEEeee--ecCchhHHHHHHHHH-----hhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYEGI--YEGRPVAVKRLVRAL-----HDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~--~~g~~VAVK~i~~~~-----~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
|.....||.|.|+.|+.+.+ .++..|++|.+.+.- ......|+.....+..|.+++++...+...+..|+-.|
T Consensus 267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e 346 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLE 346 (524)
T ss_pred cceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchh
Confidence 88889999999999877543 457899999877541 12345677566666689999999999888888999999
Q ss_pred cccc-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc
Q 042769 482 RCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS 530 (549)
Q Consensus 482 ~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK 530 (549)
||+| ++...+.- ...+.+...+++..|+ +.++|++.++|+|+|
T Consensus 347 ~~~~~s~~l~~~~------~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~ 393 (524)
T KOG0601|consen 347 FCEGGSSSLRSVT------SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVK 393 (524)
T ss_pred hhcCcchhhhhHH------HHhcCcchhhhhHHHHHhccccccchhhhccccc
Confidence 9974 54433322 3468888889999998 779999999999999
No 465
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=96.49 E-value=0.0013 Score=76.19 Aligned_cols=104 Identities=18% Similarity=0.210 Sum_probs=70.4
Q ss_pred eeeeecccccccCCceEEE-eeeecCchhHHHHHHHHHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccccc
Q 042769 407 KLFVSNTEIAKGSNGTVVY-EGIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCTC 485 (549)
Q Consensus 407 k~y~~~~~LG~G~fG~V~~-~~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~G 485 (549)
..|...+.|..|+||.||+ +++.+.+++|+ +++++. .+.|- ++..-..|.+| |
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~--lilRn---ilt~a~npfvv--------------------g 136 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQN--LILRN---ILTFAGNPFVV--------------------G 136 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhh-cccccc--hhhhc---cccccCCccee--------------------c
Confidence 3488899999999999998 68889999999 444431 11111 11221333333 5
Q ss_pred chhhhhhhcccCCcccccCchhhhHHhhheeecccceeEEEeecc----ccccCCCCchhhhhhhh
Q 042769 486 SLDDLIQTYSDSSCNSVFGEDQATRAMIEYKLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMR 547 (549)
Q Consensus 486 sL~~~L~~~~~~~~~~~l~~~~~~~i~~qiL~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmr 547 (549)
|-...++. .+.++.+.+ -.++|||+.+|+|||+| |+..-||.+.-.+.||.
T Consensus 137 Dc~tllk~------~g~lPvdmv-----la~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk 191 (1205)
T KOG0606|consen 137 DCATLLKN------IGPLPVDMV-----LAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSK 191 (1205)
T ss_pred hhhhhccc------CCCCcchhh-----HHhHhhccCCeecCCCCCCcceeeecccccccchhhhh
Confidence 55555554 334444431 12789999999999999 88999999988887764
No 466
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=96.30 E-value=0.0017 Score=63.31 Aligned_cols=93 Identities=19% Similarity=0.157 Sum_probs=57.9
Q ss_pred hhHHHHHHHHhcCC-CCCeeEEeeeccCc----ceEEEEeccccc--chhhhhhhcccCCcccccCchhhhHHhhhe---
Q 042769 446 VAFKEIQNLIASDQ-HPNIVRWYGVENDK----DFVYLSLERCTC--SLDDLIQTYSDSSCNSVFGEDQATRAMIEY--- 515 (549)
Q Consensus 446 ~~~~Ei~~L~~~l~-HpNIVrl~g~~~~~----~~~yLVmE~~~G--sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi--- 515 (549)
.+.+|+..+..+.. .-...+.+++.... ...+||+|+++| +|.+++... ...+......++.++
T Consensus 57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~------~~~~~~~~~~ll~~l~~~ 130 (206)
T PF06293_consen 57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW------EQLDPSQRRELLRALARL 130 (206)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh------cccchhhHHHHHHHHHHH
Confidence 46677766444322 11233333333321 246899999986 799998762 224445555666666
Q ss_pred eecccceeEEEeecc----ccccCC-CCchhhhh
Q 042769 516 KLRLDSVKVIIRDLS----LWKADG-HPSPLLLS 544 (549)
Q Consensus 516 L~yLH~~~IIHRDLK----Ll~~~G-~p~~~l~~ 544 (549)
+.-||.+||+|+|++ |++.++ .+...+++
T Consensus 131 i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lID 164 (206)
T PF06293_consen 131 IAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLID 164 (206)
T ss_pred HHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEc
Confidence 889999999999999 777665 44444433
No 467
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=96.11 E-value=0.0017 Score=62.58 Aligned_cols=87 Identities=15% Similarity=0.057 Sum_probs=47.3
Q ss_pred hhHHHHHHHHhcCCC-CCeeEEeeeccCcceEEEEecccc--cchhhhhhhcccCCcccccCchhhhHHhhhe----eec
Q 042769 446 VAFKEIQNLIASDQH-PNIVRWYGVENDKDFVYLSLERCT--CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY----KLR 518 (549)
Q Consensus 446 ~~~~Ei~~L~~~l~H-pNIVrl~g~~~~~~~~yLVmE~~~--GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi----L~y 518 (549)
.+.+|+..|.++... -++.+.+.+. .-+|||||++ |.....+... .++......++.++ ..-
T Consensus 54 ~~~~E~~~L~~l~~~Gv~vP~p~~~~----~~~ivME~I~~~G~~~~~l~~~-------~~~~~~~~~~~~~il~~~~~~ 122 (188)
T PF01163_consen 54 WAKKEFRNLKRLYEAGVPVPKPYDYN----RNVIVMEYIGEDGVPLPRLKDV-------DLSPEEPKELLEEILEEIIKM 122 (188)
T ss_dssp HHHHHHHHHHHCCCTT-SS--EEEEE----TTEEEEE--EETTEEGGCHHHC-------GGGGSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCccCCcEEEEe----CCEEEEEecCCCccchhhHHhc-------cccchhHHHHHHHHHHHHHHH
Confidence 466899888777444 2677777653 2469999998 7433444441 11133334444444 445
Q ss_pred ccceeEEEeecc----ccccCCCCchhhhh
Q 042769 519 LDSVKVIIRDLS----LWKADGHPSPLLLS 544 (549)
Q Consensus 519 LH~~~IIHRDLK----Ll~~~G~p~~~l~~ 544 (549)
+|..||+|+||. |++.+ .|-..++.
T Consensus 123 ~~~~givHGDLs~~NIlv~~~-~~~iIDf~ 151 (188)
T PF01163_consen 123 LHKAGIVHGDLSEYNILVDDG-KVYIIDFG 151 (188)
T ss_dssp HHCTTEEESS-STTSEEEETT-CEEE--GT
T ss_pred HHhcCceecCCChhhEEeecc-eEEEEecC
Confidence 789999999998 44443 55444443
No 468
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=95.76 E-value=0.0043 Score=59.78 Aligned_cols=103 Identities=15% Similarity=0.128 Sum_probs=65.1
Q ss_pred ccccccCCceEEEeeeecCchhHHHHHHHHH----hhhhHHHHHHHHhcCC-CCCeeEEeeeccCcc---eEEEEecccc
Q 042769 413 TEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL----HDVAFKEIQNLIASDQ-HPNIVRWYGVENDKD---FVYLSLERCT 484 (549)
Q Consensus 413 ~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~----~~~~~~Ei~~L~~~l~-HpNIVrl~g~~~~~~---~~yLVmE~~~ 484 (549)
+.|+.|.++.+|+....+|+.+++|...... .....+|...+..+.. +.++.+++.+..... ..+++|||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 5689999999887544446889999765432 2356678766544422 244666777766543 5689999998
Q ss_pred c-chhhhhhhcccCCcccccCchhhhHHhhhe---eecccce
Q 042769 485 C-SLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSV 522 (549)
Q Consensus 485 G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~ 522 (549)
| +|.+.+.. ..+++.....++.++ |..||+.
T Consensus 84 G~~l~~~~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~ 118 (223)
T cd05154 84 GRVLRDRLLR-------PELSPEERRALARALADTLAALHSV 118 (223)
T ss_pred CEecCCCCCC-------CCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 7 67665421 124445555555555 6677754
No 469
>PRK09902 hypothetical protein; Provisional
Probab=95.49 E-value=0.0051 Score=60.19 Aligned_cols=98 Identities=13% Similarity=0.052 Sum_probs=60.2
Q ss_pred hhhhHHHHHHHHhcCCC-CCeeEEeeecc--C--cceEEEEeccccc--chhhhhhhcccCCcccccCchhhhHHhhhe-
Q 042769 444 HDVAFKEIQNLIASDQH-PNIVRWYGVEN--D--KDFVYLSLERCTC--SLDDLIQTYSDSSCNSVFGEDQATRAMIEY- 515 (549)
Q Consensus 444 ~~~~~~Ei~~L~~~l~H-pNIVrl~g~~~--~--~~~~yLVmE~~~G--sL~~~L~~~~~~~~~~~l~~~~~~~i~~qi- 515 (549)
...+.+|+..|..+-.. -.+.+...+.. . .-.-+||+|-++| +|.+++.... ..+.+......++.++
T Consensus 63 ~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~----~~~~~~~~k~~il~~va 138 (216)
T PRK09902 63 RPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHA----VSPYSDEVRQAMLKAVA 138 (216)
T ss_pred chHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCC----cCCcchHHHHHHHHHHH
Confidence 34577888776554222 12444432211 1 1236799998875 9999986521 1233444444555555
Q ss_pred --eecccceeEEEeecc----ccccCCCCchhhhhh
Q 042769 516 --KLRLDSVKVIIRDLS----LWKADGHPSPLLLSL 545 (549)
Q Consensus 516 --L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~L 545 (549)
+.-||+.|+.|+|+. |++.+|.+...+++|
T Consensus 139 ~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDl 174 (216)
T PRK09902 139 LAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDL 174 (216)
T ss_pred HHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEh
Confidence 889999999999998 777777655555543
No 470
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=95.45 E-value=0.0071 Score=65.61 Aligned_cols=105 Identities=15% Similarity=0.028 Sum_probs=70.9
Q ss_pred EEEe-eeecCchhHHHHHHHHH--hhhhHHHHHHHHhcCCCCCeeEEeeeccCc----ceEEEEeccccc--chhhhhhh
Q 042769 423 VVYE-GIYEGRPVAVKRLVRAL--HDVAFKEIQNLIASDQHPNIVRWYGVENDK----DFVYLSLERCTC--SLDDLIQT 493 (549)
Q Consensus 423 V~~~-~~~~g~~VAVK~i~~~~--~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~----~~~yLVmE~~~G--sL~~~L~~ 493 (549)
.|++ ...+|..|++||+.-.. .......+....+.+.|+|||++.+++... ..+++|++|+++ +|.++--.
T Consensus 292 tyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~ 371 (655)
T KOG3741|consen 292 TYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFA 371 (655)
T ss_pred eEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHcc
Confidence 3553 66789999999994221 111111122234555999999999998743 358999999974 88877543
Q ss_pred cccC---------CcccccCchhhhHHhhhe---eecccceeEEEe
Q 042769 494 YSDS---------SCNSVFGEDQATRAMIEY---KLRLDSVKVIIR 527 (549)
Q Consensus 494 ~~~~---------~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHR 527 (549)
.... ..+...+|..+|.++.|+ |.++|+.|+.-+
T Consensus 372 ~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck 417 (655)
T KOG3741|consen 372 NPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACK 417 (655)
T ss_pred CCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceee
Confidence 2211 233457889999999999 889998775543
No 471
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=95.36 E-value=0.0077 Score=60.81 Aligned_cols=119 Identities=22% Similarity=0.133 Sum_probs=71.4
Q ss_pred eeecccccccCCceEEEeeeecCchhHHH----------HHHHH---------------HhhhhHHHHHHHHhcCCC-CC
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVK----------RLVRA---------------LHDVAFKEIQNLIASDQH-PN 462 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~VAVK----------~i~~~---------------~~~~~~~Ei~~L~~~l~H-pN 462 (549)
..++..||-|.-+.||.+....|.++||| .++.. ....+.+|++.|..+-.+ -.
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 44567999999999887766678888888 11110 011366899888776333 24
Q ss_pred eeEEeeeccCcceEEEEeccccc-chhhhhhhcccCCcccccCchhhhHHhhheeecccceeEEEeecc----ccccCCC
Q 042769 463 IVRWYGVENDKDFVYLSLERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEYKLRLDSVKVIIRDLS----LWKADGH 537 (549)
Q Consensus 463 IVrl~g~~~~~~~~yLVmE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qiL~yLH~~~IIHRDLK----Ll~~~G~ 537 (549)
|.+-++. +...+|||+.+| -|...--. .-..+.+...+.+.+.-+-..|+||+|+. |+++||.
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~~--------~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLRLD--------VENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD 240 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecccCc--------ccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC
Confidence 4444433 456799999998 44332101 11222233333222222228999999998 8888876
Q ss_pred Cc
Q 042769 538 PS 539 (549)
Q Consensus 538 p~ 539 (549)
+.
T Consensus 241 ~~ 242 (304)
T COG0478 241 IV 242 (304)
T ss_pred EE
Confidence 43
No 472
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=94.60 E-value=0.011 Score=65.39 Aligned_cols=139 Identities=17% Similarity=0.115 Sum_probs=81.9
Q ss_pred cceeeeee--cccccccCCceEEEeeeecCchhHHHHHHHHH-------------------------------------h
Q 042769 404 NVGKLFVS--NTEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL-------------------------------------H 444 (549)
Q Consensus 404 ~igk~y~~--~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~-------------------------------------~ 444 (549)
.+.+.|.- ...|+.++-|+||.+...+|+.||||+.++.- .
T Consensus 120 ~iee~F~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~ 199 (517)
T COG0661 120 PIEELFSEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFE 199 (517)
T ss_pred CHHHHHHHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHH
Confidence 44444443 26899999999999888889999999554310 0
Q ss_pred h------hhHHHHHHH---HhcCC-CCCeeEEeeecc-CcceEEEEeccccc-chhhhhhhcccCCcccccCchhhhHHh
Q 042769 445 D------VAFKEIQNL---IASDQ-HPNIVRWYGVEN-DKDFVYLSLERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAM 512 (549)
Q Consensus 445 ~------~~~~Ei~~L---~~~l~-HpNIVrl~g~~~-~~~~~yLVmE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~ 512 (549)
+ ...+|..++ .+..+ .++| ++-.+|+ ......|+|||+.| .+.+...-. ...++...+....
T Consensus 200 ~~l~~ElDy~~EA~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~-----~~g~d~k~ia~~~ 273 (517)
T COG0661 200 KRLREELDYRREAANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALK-----SAGIDRKELAELL 273 (517)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHH-----hcCCCHHHHHHHH
Confidence 0 112333332 22222 3433 3333333 34556799999998 677663221 1223333333333
Q ss_pred hhe-eecccceeEEEeecc----ccccCCCCchhhhhhhhc
Q 042769 513 IEY-KLRLDSVKVIIRDLS----LWKADGHPSPLLLSLMRL 548 (549)
Q Consensus 513 ~qi-L~yLH~~~IIHRDLK----Ll~~~G~p~~~l~~Lmrd 548 (549)
.++ +..+=..|++|.|.. +++.+|+-..+++++|+-
T Consensus 274 ~~~f~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~ 314 (517)
T COG0661 274 VRAFLRQLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGR 314 (517)
T ss_pred HHHHHHHHHhcCccccCCCccceEEecCCcEEEEcCcceec
Confidence 333 444445788999998 788888877777777763
No 473
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=94.51 E-value=0.0076 Score=60.15 Aligned_cols=117 Identities=21% Similarity=0.160 Sum_probs=69.0
Q ss_pred ccccccCCceEEEeeeecCchhHHHHHHHHH---------------------------hhhhHHHHHHHHhcCC-CCCee
Q 042769 413 TEIAKGSNGTVVYEGIYEGRPVAVKRLVRAL---------------------------HDVAFKEIQNLIASDQ-HPNIV 464 (549)
Q Consensus 413 ~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~---------------------------~~~~~~Ei~~L~~~l~-HpNIV 464 (549)
..|..|.-+.||++...++..+|||+..... ..-..+|+.+|.++.. +-.+.
T Consensus 54 g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP 133 (268)
T COG1718 54 GCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVP 133 (268)
T ss_pred eeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 4788888888888766778889988554320 0013467777666432 23344
Q ss_pred EEeeeccCcceEEEEecccc--cchhhhhhhcccCCcccccCchhhhHHhhheeeccc----ceeEEEeecc----cccc
Q 042769 465 RWYGVENDKDFVYLSLERCT--CSLDDLIQTYSDSSCNSVFGEDQATRAMIEYKLRLD----SVKVIIRDLS----LWKA 534 (549)
Q Consensus 465 rl~g~~~~~~~~yLVmE~~~--GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qiL~yLH----~~~IIHRDLK----Ll~~ 534 (549)
+-+.+.. -.|||||+. |.-.-.|+. -.+....+..+..+++++++ ..++||.||- |++
T Consensus 134 ~Pi~~~~----nVLvMEfIg~~g~pAP~LkD-------v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~- 201 (268)
T COG1718 134 EPIAFRN----NVLVMEFIGDDGLPAPRLKD-------VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH- 201 (268)
T ss_pred CceeecC----CeEEEEeccCCCCCCCCccc-------CCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-
Confidence 4444432 358999986 333333333 12333355555556655544 5899999998 666
Q ss_pred CCCCchh
Q 042769 535 DGHPSPL 541 (549)
Q Consensus 535 ~G~p~~~ 541 (549)
+|.|-..
T Consensus 202 ~~~p~iI 208 (268)
T COG1718 202 DGEPYII 208 (268)
T ss_pred CCeEEEE
Confidence 6655444
No 474
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=93.69 E-value=0.031 Score=61.16 Aligned_cols=69 Identities=16% Similarity=0.144 Sum_probs=56.0
Q ss_pred cCCCCCeeEEeeeccCcceEEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeE-EEeecc
Q 042769 457 SDQHPNIVRWYGVENDKDFVYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKV-IIRDLS 530 (549)
Q Consensus 457 ~l~HpNIVrl~g~~~~~~~~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~I-IHRDLK 530 (549)
.+.|.|+.+++|.+.+....++|.+||. |+|.+.+.. ....++..-...+++.+ |+|||.-.| .|+.|+
T Consensus 3 ~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-----~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~ 76 (484)
T KOG1023|consen 3 QLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-----EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALK 76 (484)
T ss_pred ccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-----cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeec
Confidence 3589999999999999999999999997 899999976 12345555556666777 899996655 999998
No 475
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=93.54 E-value=0.02 Score=58.99 Aligned_cols=76 Identities=20% Similarity=0.205 Sum_probs=59.5
Q ss_pred HHHHhcCCCCCeeEEeeeccCcc-----eEEEEecccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccce
Q 042769 452 QNLIASDQHPNIVRWYGVENDKD-----FVYLSLERCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSV 522 (549)
Q Consensus 452 ~~L~~~l~HpNIVrl~g~~~~~~-----~~yLVmE~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~ 522 (549)
.+|+.+ .|.|||+++.++.+.. ...++.|||. |+|.++|++.+. ....+......+++.|| |.|||+.
T Consensus 119 dnllql-vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~--~~~a~~~~~wkkw~tqIlsal~yLhs~ 195 (458)
T KOG1266|consen 119 DNLLQL-VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKK--NQKALFQKAWKKWCTQILSALSYLHSC 195 (458)
T ss_pred HHHHHH-HHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHH--hhhhhhHHHHHHHHHHHHhhhhhhhcc
Confidence 345555 8999999998876544 4788999997 899999997442 34457777788899999 8899965
Q ss_pred --eEEEeecc
Q 042769 523 --KVIIRDLS 530 (549)
Q Consensus 523 --~IIHRDLK 530 (549)
.|+|+++.
T Consensus 196 ~PpiihgnlT 205 (458)
T KOG1266|consen 196 DPPIIHGNLT 205 (458)
T ss_pred CCccccCCcc
Confidence 69999987
No 476
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=93.01 E-value=0.11 Score=57.36 Aligned_cols=122 Identities=16% Similarity=0.291 Sum_probs=71.2
Q ss_pred cccccccceeeecC----CcchhhhccccccccCCcchhhhhhcCCCcccccceeecceeeEEEEEEccccceeeecCCC
Q 042769 27 NASELTNSFFIDCG----EDWGLYAHGLLGRMKLPQSIDDYVKTAPHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSP 102 (549)
Q Consensus 27 ~~~~~~~~~~~~~~----~d~~ly~~~~~g~~~~~~~~~~~v~~sP~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~~~~~ 102 (549)
..+...+++|+... .....|++|..|..+|-+.....-..+-...+||.+++++. ..++.+|.. |+++|.+..+
T Consensus 108 ~~~~~~~gl~~~~~~~~~~~~~~~~iD~~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~-~~~~e~D~~-G~v~~~~~l~ 185 (477)
T PF05935_consen 108 SDEEMEDGLYFVNGNDWDSSSYTYLIDNNGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG-NRLYEIDLL-GKVIWEYDLP 185 (477)
T ss_dssp E-TT-TT-EEEEEETT--BEEEEEEEETTS-EEEEE-GGGT--SSEEE-TTS-EEEEEB-TEEEEE-TT---EEEEEE--
T ss_pred cccccCCcEEEEeCCCCCCCceEEEECCCccEEEEEccCccccceeeEcCCCCEEEecC-CceEEEcCC-CCEEEeeecC
Confidence 34667777766665 78899999999999999888775554434556999999986 999999995 9999999887
Q ss_pred CCCccccchhhhcccccccccchHHHHhhccCccccccccCceEEEEEcc-------------cceeecccCCCCCceee
Q 042769 103 HSSSTLQNEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRT-------------DYTLQSFEPNSDNVSWS 169 (549)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~-------------d~~l~a~d~~~g~~~Wn 169 (549)
..- ..+++|- ...+ ..++|++... +-.|.-+| .+|++.|-
T Consensus 186 ~~~----------~~~HHD~--------------~~l~--nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~ 238 (477)
T PF05935_consen 186 GGY----------YDFHHDI--------------DELP--NGNLLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWE 238 (477)
T ss_dssp TTE----------E-B-S-E--------------EE-T--TS-EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEE
T ss_pred Ccc----------ccccccc--------------EECC--CCCEEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEE
Confidence 510 1122211 0000 0144554441 23588899 79999999
Q ss_pred eeeehhhh
Q 042769 170 MTVAEIGY 177 (549)
Q Consensus 170 ~~~~~~~a 177 (549)
+...++-.
T Consensus 239 wd~~d~ld 246 (477)
T PF05935_consen 239 WDFFDHLD 246 (477)
T ss_dssp EEGGGTS-
T ss_pred EehHHhCC
Confidence 99988763
No 477
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=92.69 E-value=0.22 Score=49.55 Aligned_cols=106 Identities=13% Similarity=0.155 Sum_probs=68.7
Q ss_pred eeeecCCcchhhhccc-cccccCCcchhhhhhcCCCcccccc-ee-ecceeeEEEEEEccccceeeecCCCCCCccccch
Q 042769 35 FFIDCGEDWGLYAHGL-LGRMKLPQSIDDYVKTAPHITEEGA-VT-LGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNE 111 (549)
Q Consensus 35 ~~~~~~~d~~ly~~~~-~g~~~~~~~~~~~v~~sP~~~~dg~-v~-~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~ 111 (549)
+|+.++.|+.++..|. +|.....+....-+ .+.+++.||. +| .++.++.++.+|.++|+.+.++........
T Consensus 3 ~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~~-~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~---- 77 (300)
T TIGR03866 3 AYVSNEKDNTISVIDTATLEVTRTFPVGQRP-RGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDPEL---- 77 (300)
T ss_pred EEEEecCCCEEEEEECCCCceEEEEECCCCC-CceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCccE----
Confidence 5788889999999998 66654445443322 2345666875 55 467789999999999998876654321000
Q ss_pred hhhcccccccccchHHHHhhccCccccccccCceEEEEEc-ccceeecccCCCCCceeeee
Q 042769 112 EQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITR-TDYTLQSFEPNSDNVSWSMT 171 (549)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r-~d~~l~a~d~~~g~~~Wn~~ 171 (549)
...++. ...+|+.. .|+.|+.+|.++++....+.
T Consensus 78 --------------------~~~~~~------g~~l~~~~~~~~~l~~~d~~~~~~~~~~~ 112 (300)
T TIGR03866 78 --------------------FALHPN------GKILYIANEDDNLVTVIDIETRKVLAEIP 112 (300)
T ss_pred --------------------EEECCC------CCEEEEEcCCCCeEEEEECCCCeEEeEee
Confidence 001111 14677764 57899999988877665554
No 478
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=91.84 E-value=0.073 Score=51.71 Aligned_cols=79 Identities=23% Similarity=0.291 Sum_probs=56.2
Q ss_pred hhhhHHHHHHHHh-----cCCCCCeeEEeeeccCcceEEEEeccc---cc----chhhhhhhcccCCcccccCchhhhHH
Q 042769 444 HDVAFKEIQNLIA-----SDQHPNIVRWYGVENDKDFVYLSLERC---TC----SLDDLIQTYSDSSCNSVFGEDQATRA 511 (549)
Q Consensus 444 ~~~~~~Ei~~L~~-----~l~HpNIVrl~g~~~~~~~~yLVmE~~---~G----sL~~~L~~~~~~~~~~~l~~~~~~~i 511 (549)
..+..+|+..... ...+.+|.+++|+.+++.-.-+|+|.. +| +|.++++. +.+++ .....
T Consensus 55 ~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~-------~~~~~-~~~~~ 126 (199)
T PF10707_consen 55 YRQNRRELRYYKQLSLRRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKE-------GGLTE-ELRQA 126 (199)
T ss_pred hHHHHHHHHHHHHHhhccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHc-------CCccH-HHHHH
Confidence 3445566654322 335789999999999999999999986 24 68888865 34555 55555
Q ss_pred hhheeecccceeEEEeecc
Q 042769 512 MIEYKLRLDSVKVIIRDLS 530 (549)
Q Consensus 512 ~~qiL~yLH~~~IIHRDLK 530 (549)
+.+..+||-+.+|+.+|++
T Consensus 127 L~~f~~~l~~~~Iv~~dl~ 145 (199)
T PF10707_consen 127 LDEFKRYLLDHHIVIRDLN 145 (199)
T ss_pred HHHHHHHHHHcCCeecCCC
Confidence 5666778888888888887
No 479
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=91.40 E-value=0.4 Score=49.85 Aligned_cols=118 Identities=14% Similarity=0.157 Sum_probs=83.0
Q ss_pred eeecCCcchhhhccc-cccccCCc--chhhhhhcCCCcccccceeecceeeEEEEEEccccceeeecCCCCCCccccchh
Q 042769 36 FIDCGEDWGLYAHGL-LGRMKLPQ--SIDDYVKTAPHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEE 112 (549)
Q Consensus 36 ~~~~~~d~~ly~~~~-~g~~~~~~--~~~~~v~~sP~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~~ 112 (549)
+-.|.-+|-|..+.. +|..+|++ ..++++--.=+-. --++.+|++|+.++.-...++.....|+-+.++
T Consensus 121 LATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~-a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~------- 192 (399)
T KOG0296|consen 121 LATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPR-AHILLAGSTDGSVWMWQIPSQALCKVMSGHNSP------- 192 (399)
T ss_pred EEecCCCccEEEEEcccCceEEEeecccCceEEEEeccc-ccEEEeecCCCcEEEEECCCcceeeEecCCCCC-------
Confidence 356667888888888 88889987 5666553332223 347999999999999988887666666554311
Q ss_pred hhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCceeeeeeehhhhhhhcccc
Q 042769 113 QKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVSWSMTVAEIGYAFLCQDF 184 (549)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~Wn~~~~~~~a~~~~~~~ 184 (549)
|+ .+..-|.. ..+..|-+|++|+..+++||.+.-.++-++ ...++|...
T Consensus 193 ct----------------~G~f~pdG------Kr~~tgy~dgti~~Wn~ktg~p~~~~~~~e-~~~~~~~~~ 241 (399)
T KOG0296|consen 193 CT----------------CGEFIPDG------KRILTGYDDGTIIVWNPKTGQPLHKITQAE-GLELPCISL 241 (399)
T ss_pred cc----------------cccccCCC------ceEEEEecCceEEEEecCCCceeEEecccc-cCcCCcccc
Confidence 11 11122222 689999999999999999999999998777 555666653
No 480
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=91.25 E-value=0.87 Score=45.34 Aligned_cols=133 Identities=17% Similarity=0.267 Sum_probs=86.6
Q ss_pred ceeccCCCccccccccceeeeeccccccccccce-eeecCCcchhhhccc--cccc---cCCcchhhhhhcCCCcccccc
Q 042769 2 SWTFGTGTPIYSSYQAPVQATVDQDNASELTNSF-FIDCGEDWGLYAHGL--LGRM---KLPQSIDDYVKTAPHITEEGA 75 (549)
Q Consensus 2 ~W~f~tg~~i~ss~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~ly~~~~--~g~~---~~~~~~~~~v~~sP~~~~dg~ 75 (549)
+|--.||-.+-|- |++...+ .-++++++ |+.-.+.+++-.+|+ .|.. ++|.+++. -+-.| +.++
T Consensus 169 LWD~rTgt~v~sL-~~~s~Vt-----SlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~S-ASL~P---~k~~ 238 (334)
T KOG0278|consen 169 LWDHRTGTEVQSL-EFNSPVT-----SLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVES-ASLHP---KKEF 238 (334)
T ss_pred EEEeccCcEEEEE-ecCCCCc-----ceeeccCCCEEEEecCceeEEeccccccceeeccCcccccc-ccccC---CCce
Confidence 4666666544332 3332211 23466666 888888889999999 5665 45666543 33334 3477
Q ss_pred eeecceeeEEEEEEccccceeeecCCCCCCccccchhhhcccccccccchHHHHhhccCccccccccCceEEEEEcccce
Q 042769 76 VTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYT 155 (549)
Q Consensus 76 v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~ 155 (549)
...|+.|..+|-.|-.||+.|-.|-... ..| + .-.=.+-|+-
T Consensus 239 fVaGged~~~~kfDy~TgeEi~~~nkgh------------------------------~gp--V------hcVrFSPdGE 280 (334)
T KOG0278|consen 239 FVAGGEDFKVYKFDYNTGEEIGSYNKGH------------------------------FGP--V------HCVRFSPDGE 280 (334)
T ss_pred EEecCcceEEEEEeccCCceeeecccCC------------------------------CCc--e------EEEEECCCCc
Confidence 7789999999999999999997763332 010 0 1122356899
Q ss_pred eecccCCCCCce-eeeeeehhhhhhhcc
Q 042769 156 LQSFEPNSDNVS-WSMTVAEIGYAFLCQ 182 (549)
Q Consensus 156 l~a~d~~~g~~~-Wn~~~~~~~a~~~~~ 182 (549)
+||...++|.++ |.++.+.-.-.-.|.
T Consensus 281 ~yAsGSEDGTirlWQt~~~~~~~~~~~~ 308 (334)
T KOG0278|consen 281 LYASGSEDGTIRLWQTTPGKTYGLWKCV 308 (334)
T ss_pred eeeccCCCceEEEEEecCCCchhhcccc
Confidence 999999999887 999988655333333
No 481
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=91.17 E-value=0.062 Score=59.59 Aligned_cols=127 Identities=18% Similarity=0.107 Sum_probs=71.9
Q ss_pred ccccccCCceEEEeeeecCchhHHHHHHHH----------------------------------Hhh------hhHHHHH
Q 042769 413 TEIAKGSNGTVVYEGIYEGRPVAVKRLVRA----------------------------------LHD------VAFKEIQ 452 (549)
Q Consensus 413 ~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~----------------------------------~~~------~~~~Ei~ 452 (549)
+.||.-+.|.|+.+....|+.||||+-++. ..+ .+.+|.+
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 689999999998888888999999833321 000 1234443
Q ss_pred H---HHhcCCCCC------eeEEeeeccCcceEEEEeccccc-chh--hhhhhcccCCcccccCchhhhHHhhhe-eecc
Q 042769 453 N---LIASDQHPN------IVRWYGVENDKDFVYLSLERCTC-SLD--DLIQTYSDSSCNSVFGEDQATRAMIEY-KLRL 519 (549)
Q Consensus 453 ~---L~~~l~HpN------IVrl~g~~~~~~~~yLVmE~~~G-sL~--~~L~~~~~~~~~~~l~~~~~~~i~~qi-L~yL 519 (549)
+ ..+.+.|-+ |.++|..+. ....|+||||+| .+. +.|.+ ..++...+...+.++ ++-|
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~s--t~RVLtME~~~G~~i~Dl~~i~~-------~gi~~~~i~~~l~~~~~~qI 317 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLS--TKRVLTMEYVDGIKINDLDAIDK-------RGISPHDILNKLVEAYLEQI 317 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcC--cceEEEEEecCCccCCCHHHHHH-------cCCCHHHHHHHHHHHHHHHH
Confidence 3 222334545 444443333 346799999987 332 44544 234555555555444 3334
Q ss_pred cceeEEEeecc----cccc----CCCCchhhhhhhhc
Q 042769 520 DSVKVIIRDLS----LWKA----DGHPSPLLLSLMRL 548 (549)
Q Consensus 520 H~~~IIHRDLK----Ll~~----~G~p~~~l~~Lmrd 548 (549)
=..|++|.|-. |+.. ++....++.+|++.
T Consensus 318 f~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~ 354 (538)
T KOG1235|consen 318 FKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAV 354 (538)
T ss_pred HhcCCccCCCCCCcEEEecCCCCCccEEEEccccccc
Confidence 45578888887 4543 33333334555543
No 482
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=90.92 E-value=0.24 Score=51.16 Aligned_cols=86 Identities=9% Similarity=0.188 Sum_probs=47.9
Q ss_pred eeeEEEEEEccccceeeecCCCC--CCccccchhhhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeec
Q 042769 81 KTTTVFVLEAKTGRLIRTYGSPH--SSSTLQNEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQS 158 (549)
Q Consensus 81 k~~~~~~vda~tG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a 158 (549)
.|+.++.||.+||+++|..++.+ ..+........ ...........+|+--+|.... ....+.|+=-|.-..|+.
T Consensus 94 ~d~~~~EiDi~TgevlfeW~a~DH~~~~~~~~~~~~---~~~~g~~~~~~~D~~HiNsV~~-~~~G~yLiS~R~~~~i~~ 169 (299)
T PF14269_consen 94 LDDVFQEIDIETGEVLFEWSASDHVDPNDSYDSQDP---LPGSGGSSSFPWDYFHINSVDK-DDDGDYLISSRNTSTIYK 169 (299)
T ss_pred ecceeEEeccCCCCEEEEEEhhheeccccccccccc---ccCCCcCCCCCCCccEeeeeee-cCCccEEEEecccCEEEE
Confidence 46788999999999999998876 11111100000 0000001122233333332221 111244444566679999
Q ss_pred ccCCCCCceeee
Q 042769 159 FEPNSDNVSWSM 170 (549)
Q Consensus 159 ~d~~~g~~~Wn~ 170 (549)
+|+++|+++|.+
T Consensus 170 I~~~tG~I~W~l 181 (299)
T PF14269_consen 170 IDPSTGKIIWRL 181 (299)
T ss_pred EECCCCcEEEEe
Confidence 999999999998
No 483
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=90.91 E-value=0.41 Score=45.86 Aligned_cols=108 Identities=14% Similarity=0.169 Sum_probs=68.7
Q ss_pred eeeecCCcchhhhccc-cccccCCcchhhhhhcCCCccccc-ceeecceeeEEEEEEccccceeeecCCCCCCccccchh
Q 042769 35 FFIDCGEDWGLYAHGL-LGRMKLPQSIDDYVKTAPHITEEG-AVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEE 112 (549)
Q Consensus 35 ~~~~~~~d~~ly~~~~-~g~~~~~~~~~~~v~~sP~~~~dg-~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~~ 112 (549)
.++.++.||.++..|. .+.....+...+---.+-+.++|| .+++|+.++.+...|..+|+.+.++......
T Consensus 149 ~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~------- 221 (289)
T cd00200 149 FVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENG------- 221 (289)
T ss_pred EEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCc-------
Confidence 3555556999999998 566555555433222333445576 7888988999999999999988777432100
Q ss_pred hhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCceeeee
Q 042769 113 QKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVSWSMT 171 (549)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~Wn~~ 171 (549)
+.. ...++ ....++.+..|+.|+.+|..+++....+.
T Consensus 222 -----i~~-----------~~~~~------~~~~~~~~~~~~~i~i~~~~~~~~~~~~~ 258 (289)
T cd00200 222 -----VNS-----------VAFSP------DGYLLASGSEDGTIRVWDLRTGECVQTLS 258 (289)
T ss_pred -----eEE-----------EEEcC------CCcEEEEEcCCCcEEEEEcCCceeEEEcc
Confidence 000 00111 11455555569999999988887776665
No 484
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=90.40 E-value=0.19 Score=53.51 Aligned_cols=114 Identities=9% Similarity=0.126 Sum_probs=75.6
Q ss_pred cceeeecCCcchhhhccc-cccccCCcchhhhhhcCCCcccccc-eeecceeeEEEEEEccccceeeecCCCCCCccccc
Q 042769 33 NSFFIDCGEDWGLYAHGL-LGRMKLPQSIDDYVKTAPHITEEGA-VTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQN 110 (549)
Q Consensus 33 ~~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~~v~~sP~~~~dg~-v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~ 110 (549)
+-+|..-.++++|..+|. +.+..-.+.+..-++.+.+.+.||. +|+.+.|+.+..||..|++++.+...+..+.++.
T Consensus 6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~i~- 84 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRGIA- 84 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEEEE-
T ss_pred cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcceEE-
Confidence 344556668999999998 5554445555555677788888885 9999999999999999999999988865211110
Q ss_pred hhhhcccccccccchHHHHhhccCccccccccCceEEEEEc-ccceeecccCCCCCceeeeeeehhh
Q 042769 111 EEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITR-TDYTLQSFEPNSDNVSWSMTVAEIG 176 (549)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r-~d~~l~a~d~~~g~~~Wn~~~~~~~ 176 (549)
.++. ...||++. .+..|..+|.+|.++.=.+.++.+.
T Consensus 85 -----------------------~s~D------G~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~ 122 (369)
T PF02239_consen 85 -----------------------VSPD------GKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMP 122 (369)
T ss_dssp -----------------------E--T------TTEEEEEEEETTEEEEEETTT--EEEEEE--EE-
T ss_pred -----------------------EcCC------CCEEEEEecCCCceeEeccccccceeeccccccc
Confidence 1111 14677775 6889999999999999888777654
No 485
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=88.82 E-value=0.79 Score=43.86 Aligned_cols=108 Identities=13% Similarity=0.140 Sum_probs=68.0
Q ss_pred eeeecCCcchhhhccc-cccccCCcchhhhhhcCCCccccc-ceeecceeeEEEEEEccccceeeecCCCCCCccccchh
Q 042769 35 FFIDCGEDWGLYAHGL-LGRMKLPQSIDDYVKTAPHITEEG-AVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEE 112 (549)
Q Consensus 35 ~~~~~~~d~~ly~~~~-~g~~~~~~~~~~~v~~sP~~~~dg-~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~~ 112 (549)
.++.++.||.++..+. .+.....+...+.--.+-+..+++ .++.|+.++.++..|..+++.+..+......
T Consensus 65 ~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------- 137 (289)
T cd00200 65 YLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDW------- 137 (289)
T ss_pred EEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCc-------
Confidence 4788888999999998 444444444322111222233344 4555666999999999999998887632200
Q ss_pred hhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCceeeee
Q 042769 113 QKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVSWSMT 171 (549)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~Wn~~ 171 (549)
... ...++. ...++.+..|+.|+.+|.++++....+.
T Consensus 138 i~~----------------~~~~~~------~~~l~~~~~~~~i~i~d~~~~~~~~~~~ 174 (289)
T cd00200 138 VNS----------------VAFSPD------GTFVASSSQDGTIKLWDLRTGKCVATLT 174 (289)
T ss_pred EEE----------------EEEcCc------CCEEEEEcCCCcEEEEEccccccceeEe
Confidence 000 001111 1467777779999999998888877776
No 486
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=88.53 E-value=0.27 Score=51.77 Aligned_cols=163 Identities=15% Similarity=0.132 Sum_probs=91.1
Q ss_pred cceeeecCCcchhhhccc-cccccCCcchhh-h---hhcCCCcccccceeecceeeEEEEEEccccceeeecCCCCCCcc
Q 042769 33 NSFFIDCGEDWGLYAHGL-LGRMKLPQSIDD-Y---VKTAPHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSST 107 (549)
Q Consensus 33 ~~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~-~---v~~sP~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~ 107 (549)
++-|+.|||||.+-..|. -+++.-..+... . |+==|. .|.|..||||..+=..|++||+-+ ++..+-.++
T Consensus 192 DskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~---kgLiasgskDnlVKlWDprSg~cl--~tlh~HKnt 266 (464)
T KOG0284|consen 192 DSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPT---KGLIASGSKDNLVKLWDPRSGSCL--ATLHGHKNT 266 (464)
T ss_pred CceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCc---cceeEEccCCceeEeecCCCcchh--hhhhhccce
Confidence 444999999999988776 444422212222 1 222232 568999999999999999999988 444331121
Q ss_pred ccchhhhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCceeeeeeehhhhhhhccccCCc
Q 042769 108 LQNEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVSWSMTVAEIGYAFLCQDFENP 187 (549)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~Wn~~~~~~~a~~~~~~~~~~ 187 (549)
+- . ...++ ++ +-|.-++.|..+++||-++=+++..+.--+-......=++-++
T Consensus 267 Vl----------~-----------~~f~~-----n~-N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~ 319 (464)
T KOG0284|consen 267 VL----------A-----------VKFNP-----NG-NWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNE 319 (464)
T ss_pred EE----------E-----------EEEcC-----CC-CeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccc
Confidence 11 0 00111 11 6788889999999999886676655442222222111122222
Q ss_pred --ccccccccccccCcccccCCCccccc---cchhHHHHhhhccCCCC
Q 042769 188 --FIGATMNTSYELGPEIGHDFDLPFAC---QSKGIIQRFRKHNNSDS 230 (549)
Q Consensus 188 --~~~~~~~~~~~l~~~w~~~~~~p~~~---~~~~~~~~~~~~~l~~~ 230 (549)
+..+..+++... |......|+.. -+...|+.+.=+|+..+
T Consensus 320 ~lftsgg~Dgsvvh---~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhi 364 (464)
T KOG0284|consen 320 SLFTSGGSDGSVVH---WVVGLEEPLGEIPPAHDGEIWSLAYHPLGHI 364 (464)
T ss_pred cceeeccCCCceEE---EeccccccccCCCcccccceeeeecccccee
Confidence 222233444333 55555556554 22333556666666544
No 487
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=87.08 E-value=1.2 Score=44.16 Aligned_cols=147 Identities=14% Similarity=0.212 Sum_probs=95.4
Q ss_pred eeecCCcchhhhccc-cccccCCcch--hhhhhcCCCcccccceeecceeeEEEEEEccccceeeecCCCCCC-ccccch
Q 042769 36 FIDCGEDWGLYAHGL-LGRMKLPQSI--DDYVKTAPHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSS-STLQNE 111 (549)
Q Consensus 36 ~~~~~~d~~ly~~~~-~g~~~~~~~~--~~~v~~sP~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~-~~~~~~ 111 (549)
-+.|+.|..+=-.++ .|...-.|+- .|...+. ..+++..+-.|+-|..++.-|..||+.+++|...++- |++.
T Consensus 32 ~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~-~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~-- 108 (307)
T KOG0316|consen 32 CLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAA-LSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVR-- 108 (307)
T ss_pred EEEcCCCceEEeecccccceeeeecCCCceeeecc-ccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEE--
Confidence 388999988877777 6666444544 3333333 2343556778888999999999999999999998621 3222
Q ss_pred hhhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCceeeeeeehhhhhhhccccCC-cccc
Q 042769 112 EQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVSWSMTVAEIGYAFLCQDFEN-PFIG 190 (549)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~Wn~~~~~~~a~~~~~~~~~-~~~~ 190 (549)
+ +++..+|.=|+-|-++++.|-++....=--.+.+..+....++... .+..
T Consensus 109 ---------------------------f-NeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIva 160 (307)
T KOG0316|consen 109 ---------------------------F-NEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVA 160 (307)
T ss_pred ---------------------------e-cCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecccEEEe
Confidence 2 1123578889999999999987776654445555555555554333 3455
Q ss_pred cccccc---cccC--cccccCCCccccc
Q 042769 191 ATMNTS---YELG--PEIGHDFDLPFAC 213 (549)
Q Consensus 191 ~~~~~~---~~l~--~~w~~~~~~p~~~ 213 (549)
+++++. |.+. -.-.-.|+.|+.|
T Consensus 161 GS~DGtvRtydiR~G~l~sDy~g~pit~ 188 (307)
T KOG0316|consen 161 GSVDGTVRTYDIRKGTLSSDYFGHPITS 188 (307)
T ss_pred eccCCcEEEEEeecceeehhhcCCccee
Confidence 556665 3332 1133347778887
No 488
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=86.90 E-value=1.2 Score=50.88 Aligned_cols=106 Identities=17% Similarity=0.185 Sum_probs=75.4
Q ss_pred eeecCCcchhhhccc-cc---------cccCCcc-hhhhhhcCCCcccccceeecceeeEEEEEEccccceeeecCCCCC
Q 042769 36 FIDCGEDWGLYAHGL-LG---------RMKLPQS-IDDYVKTAPHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHS 104 (549)
Q Consensus 36 ~~~~~~d~~ly~~~~-~g---------~~~~~~~-~~~~v~~sP~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~ 104 (549)
++.+..++.||..+. ++ .++..+. |..++|-+-++- .|.+||.+|.+-..|-+||+++++|+--.+
T Consensus 127 lia~d~~~~l~vw~~s~~~~e~~l~~~~~~~~~~~Ital~HP~TYLN---KIvvGs~~G~lql~Nvrt~K~v~~f~~~~s 203 (910)
T KOG1539|consen 127 LIAVDISNILFVWKTSSIQEELYLQSTFLKVEGDFITALLHPSTYLN---KIVVGSSQGRLQLWNVRTGKVVYTFQEFFS 203 (910)
T ss_pred EEEEEccCcEEEEEeccccccccccceeeeccCCceeeEecchhhee---eEEEeecCCcEEEEEeccCcEEEEeccccc
Confidence 466667777777766 32 1122222 444555555554 599999999999999999999999876542
Q ss_pred CccccchhhhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCceeeeeee
Q 042769 105 SSTLQNEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVSWSMTVA 173 (549)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~Wn~~~~ 173 (549)
.-|.. + ..| .. ++|-||-.+|+|..+.-+.|+++-+|...
T Consensus 204 ~IT~i--e---------------------qsP-aL-----DVVaiG~~~G~ViifNlK~dkil~sFk~d 243 (910)
T KOG1539|consen 204 RITAI--E---------------------QSP-AL-----DVVAIGLENGTVIIFNLKFDKILMSFKQD 243 (910)
T ss_pred ceeEe--c---------------------cCC-cc-----eEEEEeccCceEEEEEcccCcEEEEEEcc
Confidence 22111 0 122 22 69999999999999999999999999875
No 489
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=86.81 E-value=0.18 Score=59.25 Aligned_cols=126 Identities=19% Similarity=0.115 Sum_probs=83.4
Q ss_pred eeecccccccCCceEEEe-eeecCchhHHHHHHHH------HhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEec
Q 042769 409 FVSNTEIAKGSNGTVVYE-GIYEGRPVAVKRLVRA------LHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLE 481 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~-~~~~g~~VAVK~i~~~------~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE 481 (549)
+.+.+-+-.|+++.++.. -..+|...+.|..... ..+...++-..++. -.||-+++....+......+|+++
T Consensus 806 ~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~-p~~P~v~~~~~s~~~rsP~~L~~~ 884 (1205)
T KOG0606|consen 806 FEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILIT-PRSPAVVRSFPSFPCRSPLPLVGH 884 (1205)
T ss_pred ceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCcccc-CCCCceecccCCCCCCCCcchhhH
Confidence 777778999999997663 2334544455533321 12223333322222 256778877766667778999999
Q ss_pred ccc-cchhhhhhhcccCCcccccCchhhhHHhhhe---eecccceeEEEeecc----ccccCCCCchh
Q 042769 482 RCT-CSLDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSVKVIIRDLS----LWKADGHPSPL 541 (549)
Q Consensus 482 ~~~-GsL~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~~IIHRDLK----Ll~~~G~p~~~ 541 (549)
|++ ++|...|+. .++.+.+-++.+...+ ++|||...++|||++ |...+|+-...
T Consensus 885 ~~~~~~~~Skl~~------~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~ 946 (1205)
T KOG0606|consen 885 YLNGGDLPSKLHN------SGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLT 946 (1205)
T ss_pred HhccCCchhhhhc------CCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccC
Confidence 998 599999987 4456666666666555 889999999999999 55666664433
No 490
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=86.62 E-value=1.3 Score=47.73 Aligned_cols=115 Identities=10% Similarity=0.078 Sum_probs=82.9
Q ss_pred eeeecCCcchhhhccc--cccccCCcchhhhhhcCCCcccccc-eeecceeeEEEEEEccccceeeecCCCCCCccccch
Q 042769 35 FFIDCGEDWGLYAHGL--LGRMKLPQSIDDYVKTAPHITEEGA-VTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNE 111 (549)
Q Consensus 35 ~~~~~~~d~~ly~~~~--~g~~~~~~~~~~~v~~sP~~~~dg~-v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~ 111 (549)
+++.|+.|+-+|..+. +|...=.|.-...--.+=+.+++|+ ...+|.|.++=.-|.+||+.+-+|.+..-+. |+
T Consensus 229 LlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~~~~~-cv-- 305 (503)
T KOG0282|consen 229 LLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHLDKVPT-CV-- 305 (503)
T ss_pred EEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEecCCCce-ee--
Confidence 3789999999999888 3555445555443333334566775 4557899999999999999999998864221 11
Q ss_pred hhhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCceeeeeeehhhhhhhccc
Q 042769 112 EQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVSWSMTVAEIGYAFLCQD 183 (549)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~Wn~~~~~~~a~~~~~~ 183 (549)
+ ..|.. ++++++|-.|+.|...|-++|++. -+|...+-|+-
T Consensus 306 ------------------k---f~pd~-----~n~fl~G~sd~ki~~wDiRs~kvv-----qeYd~hLg~i~ 346 (503)
T KOG0282|consen 306 ------------------K---FHPDN-----QNIFLVGGSDKKIRQWDIRSGKVV-----QEYDRHLGAIL 346 (503)
T ss_pred ------------------e---cCCCC-----CcEEEEecCCCcEEEEeccchHHH-----HHHHhhhhhee
Confidence 0 11111 379999999999999999999964 78888877763
No 491
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=86.49 E-value=0.52 Score=49.15 Aligned_cols=122 Identities=16% Similarity=0.102 Sum_probs=76.2
Q ss_pred eeecccccccCCceEEEeeeecCchhHHHHHHH--H-------Hh----------------hhhHHHHHHHHhcCCCCC-
Q 042769 409 FVSNTEIAKGSNGTVVYEGIYEGRPVAVKRLVR--A-------LH----------------DVAFKEIQNLIASDQHPN- 462 (549)
Q Consensus 409 y~~~~~LG~G~fG~V~~~~~~~g~~VAVK~i~~--~-------~~----------------~~~~~Ei~~L~~~l~HpN- 462 (549)
+.+++.||=|.-+.||...-..|++.++|.=+. . .. -.+.+|+..|.++-.|..
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp 173 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP 173 (465)
T ss_pred hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence 556679999999998887778899999993221 1 00 024578866666544432
Q ss_pred eeEEeeeccCcceEEEEeccccc-chhhhhhhcccCCcccccCchhhhHHhhheeecccceeEEEeecc----ccccCCC
Q 042769 463 IVRWYGVENDKDFVYLSLERCTC-SLDDLIQTYSDSSCNSVFGEDQATRAMIEYKLRLDSVKVIIRDLS----LWKADGH 537 (549)
Q Consensus 463 IVrl~g~~~~~~~~yLVmE~~~G-sL~~~L~~~~~~~~~~~l~~~~~~~i~~qiL~yLH~~~IIHRDLK----Ll~~~G~ 537 (549)
+.+.+ +....++|||++.| -|.+.-+- .....+..-+..++.-|-..|+||+|.. +++.++.
T Consensus 174 VPkpi----D~~RH~Vvmelv~g~Pl~~v~~v---------~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~ 240 (465)
T KOG2268|consen 174 VPKPI----DHNRHCVVMELVDGYPLRQVRHV---------EDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDK 240 (465)
T ss_pred CCCcc----cccceeeHHHhhcccceeeeeec---------CChHHHHHHHHHHHHHHHHcCceecccchheeEEecCCC
Confidence 22333 33457899999987 66544221 1222333333334566778999999998 6777776
Q ss_pred Cchhhh
Q 042769 538 PSPLLL 543 (549)
Q Consensus 538 p~~~l~ 543 (549)
+....+
T Consensus 241 i~vIDF 246 (465)
T KOG2268|consen 241 IVVIDF 246 (465)
T ss_pred EEEeec
Confidence 655443
No 492
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=86.24 E-value=1.5 Score=45.74 Aligned_cols=104 Identities=14% Similarity=0.162 Sum_probs=71.1
Q ss_pred ceeeecCCcchhhhccc-c-ccccCCcchhhhhhcCCC----ccccc-ceeecceeeEEEEEEccccceeeecCCCCCCc
Q 042769 34 SFFIDCGEDWGLYAHGL-L-GRMKLPQSIDDYVKTAPH----ITEEG-AVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSS 106 (549)
Q Consensus 34 ~~~~~~~~d~~ly~~~~-~-g~~~~~~~~~~~v~~sP~----~~~dg-~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~ 106 (549)
.+++.|++||++++... + +..|+-.- +.+|| +..|| .+..|..|+++.+-|+|||.++.+.+..+..
T Consensus 161 ~illAG~~DGsvWmw~ip~~~~~kv~~G-----h~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~- 234 (399)
T KOG0296|consen 161 HILLAGSTDGSVWMWQIPSQALCKVMSG-----HNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGL- 234 (399)
T ss_pred cEEEeecCCCcEEEEECCCcceeeEecC-----CCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccC-
Confidence 45799999999999887 4 33343221 44444 33456 4677888999999999999999777653200
Q ss_pred cccchhhhcccccccccchHHHHhhcc-CccccccccCceEEEEEcccceeecccCCCCCceeeee
Q 042769 107 TLQNEEQKSASYKHDKVNNEQLVKSGL-TNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVSWSMT 171 (549)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~Wn~~ 171 (549)
. .|.. .+.. ..++.-|..|+.++-+...+|+++--..
T Consensus 235 -------~---------------~~~~~~~~~------~~~~~~g~~e~~~~~~~~~sgKVv~~~n 272 (399)
T KOG0296|consen 235 -------E---------------LPCISLNLA------GSTLTKGNSEGVACGVNNGSGKVVNCNN 272 (399)
T ss_pred -------c---------------CCccccccc------cceeEeccCCccEEEEccccceEEEecC
Confidence 0 0000 1111 2688999999999999999999985443
No 493
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=84.52 E-value=0.67 Score=41.11 Aligned_cols=43 Identities=21% Similarity=0.196 Sum_probs=35.0
Q ss_pred ccccccCCceEEEeeeecCchhHHHHHHHHHhhhhHHHHHHHH
Q 042769 413 TEIAKGSNGTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQNLI 455 (549)
Q Consensus 413 ~~LG~G~fG~V~~~~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~ 455 (549)
..||.|+.|.||.+...+|+.||||+..+...+.+..++..|.
T Consensus 17 ~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~ 59 (119)
T PF03109_consen 17 EPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILR 59 (119)
T ss_pred chhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHH
Confidence 5899999999988888889999999998876666666665543
No 494
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=83.97 E-value=2.7 Score=41.64 Aligned_cols=107 Identities=15% Similarity=0.106 Sum_probs=63.8
Q ss_pred eecCCcchhhhccc-cccc--cCCcchhhh----h-hcCCCcccccce-eec-ceeeEEEEEEccccceeeecCCCCCCc
Q 042769 37 IDCGEDWGLYAHGL-LGRM--KLPQSIDDY----V-KTAPHITEEGAV-TLG-SKTTTVFVLEAKTGRLIRTYGSPHSSS 106 (549)
Q Consensus 37 ~~~~~d~~ly~~~~-~g~~--~~~~~~~~~----v-~~sP~~~~dg~v-~~G-sk~~~~~~vda~tG~~~~~~~~~~~~~ 106 (549)
+.+..|+.++..|. +|.. .+.+..+.. + ....+++.||.. |++ ..++++..+|.++|+.+..........
T Consensus 173 ~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~ 252 (300)
T TIGR03866 173 VSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLLVGQRVW 252 (300)
T ss_pred EEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEeCCCcc
Confidence 34445888888887 5543 333332210 1 112234567753 553 345679999999999876543321000
Q ss_pred cccchhhhcccccccccchHHHHhhccCccccccccCceEEEEE-cccceeecccCCCCCceeeeeee
Q 042769 107 TLQNEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFIT-RTDYTLQSFEPNSDNVSWSMTVA 173 (549)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~-r~d~~l~a~d~~~g~~~Wn~~~~ 173 (549)
. -..+|.. ..||++ +.++.|..+|.++|+++..+.++
T Consensus 253 ~------------------------~~~~~~g------~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~ 290 (300)
T TIGR03866 253 Q------------------------LAFTPDE------KYLLTTNGVSNDVSVIDVAALKVIKSIKVG 290 (300)
T ss_pred e------------------------EEECCCC------CEEEEEcCCCCeEEEEECCCCcEEEEEEcc
Confidence 0 0012211 478886 56899999999999999888765
No 495
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=83.09 E-value=2.2 Score=42.56 Aligned_cols=135 Identities=16% Similarity=0.231 Sum_probs=90.8
Q ss_pred eeecCCcchhhhccc-cccccCCcchhhhhhcCCCcccccceeecceeeEEEEEEccccceeeecCCCCCCccccchhhh
Q 042769 36 FIDCGEDWGLYAHGL-LGRMKLPQSIDDYVKTAPHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEEQK 114 (549)
Q Consensus 36 ~~~~~~d~~ly~~~~-~g~~~~~~~~~~~v~~sP~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~~~~ 114 (549)
|+..++|+.+=..|- +|..--...+..-|.|.- +++||-+..=..-+++--.||++=+++..|.+|. +
T Consensus 158 iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlE-vs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~----------n 226 (334)
T KOG0278|consen 158 ILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLE-VSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPC----------N 226 (334)
T ss_pred EEeeccCCceEEEEeccCcEEEEEecCCCCccee-eccCCCEEEEecCceeEEeccccccceeeccCcc----------c
Confidence 455567777777777 666644444455565555 4459977777777888889999999999999985 1
Q ss_pred cccccccccchHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCceeeeeeehhhhhhhccccCCccccccc-
Q 042769 115 SASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVSWSMTVAEIGYAFLCQDFENPFIGATM- 193 (549)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~Wn~~~~~~~a~~~~~~~~~~~~~~~~- 193 (549)
+.++.+.| +.+..+-|-.|..+|-+|=.||+++=.+.-+++. |..-+.+
T Consensus 227 --------------V~SASL~P------~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~g----------pVhcVrFS 276 (334)
T KOG0278|consen 227 --------------VESASLHP------KKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFG----------PVHCVRFS 276 (334)
T ss_pred --------------cccccccC------CCceEEecCcceEEEEEeccCCceeeecccCCCC----------ceEEEEEC
Confidence 11122333 2278888999999999999999999775445444 2222232
Q ss_pred -ccc-cccCcc------cccCCCccc
Q 042769 194 -NTS-YELGPE------IGHDFDLPF 211 (549)
Q Consensus 194 -~~~-~~l~~~------w~~~~~~p~ 211 (549)
+++ |+.|.+ |+..-+.+.
T Consensus 277 PdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 277 PDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred CCCceeeccCCCceEEEEEecCCCch
Confidence 444 666643 877755554
No 496
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=82.74 E-value=0.8 Score=45.25 Aligned_cols=113 Identities=14% Similarity=0.187 Sum_probs=76.2
Q ss_pred cceeeecCCcchhhhccc-cccccCCcchhhhhhcCCCccccc-ceeecceeeEEEEEEccccceeeecCCCCCCccccc
Q 042769 33 NSFFIDCGEDWGLYAHGL-LGRMKLPQSIDDYVKTAPHITEEG-AVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQN 110 (549)
Q Consensus 33 ~~~~~~~~~d~~ly~~~~-~g~~~~~~~~~~~v~~sP~~~~dg-~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~ 110 (549)
.--++.||-||.+=..|- .|.+---+= +..|- +-+++.|| -+.+|+-++++-.+|-.||+++..|.-..
T Consensus 155 ~heIvaGS~DGtvRtydiR~G~l~sDy~-g~pit-~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhk------- 225 (307)
T KOG0316|consen 155 EHEIVAGSVDGTVRTYDIRKGTLSSDYF-GHPIT-SVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHK------- 225 (307)
T ss_pred ccEEEeeccCCcEEEEEeecceeehhhc-CCcce-eEEecCCCCEEEEeeccceeeecccchhHHHHHhcccc-------
Confidence 334799999999988886 665532111 11121 12244466 57889999999999999999998887643
Q ss_pred hhhhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCceeeeeeeh
Q 042769 111 EEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVSWSMTVAE 174 (549)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~Wn~~~~~ 174 (549)
+.+-++|.-+.. +...|+=|+.|+.||-.|-..+.+.=++.+..
T Consensus 226 -------------n~eykldc~l~q-------sdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~ 269 (307)
T KOG0316|consen 226 -------------NMEYKLDCCLNQ-------SDTHVFSGSEDGKVYFWDLVDETQISKLSVVS 269 (307)
T ss_pred -------------cceeeeeeeecc-------cceeEEeccCCceEEEEEeccceeeeeeccCC
Confidence 222333333222 33678889999999999988887776665554
No 497
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=82.03 E-value=2.2 Score=43.53 Aligned_cols=100 Identities=15% Similarity=0.132 Sum_probs=58.4
Q ss_pred eeeecCCcchhhhccc-cccccCCcchhhhhhcCCCcccccceeecceeeEEEEEEccccceeeecCCCCCCccccchhh
Q 042769 35 FFIDCGEDWGLYAHGL-LGRMKLPQSIDDYVKTAPHITEEGAVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSSTLQNEEQ 113 (549)
Q Consensus 35 ~~~~~~~d~~ly~~~~-~g~~~~~~~~~~~v~~sP~~~~dg~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~~~~~~~~ 113 (549)
..+.|+-||.+=.+|- .|..-.--+-++.|..==..-.+|.|..||||.++=..|+..-...-++..+.
T Consensus 67 ~~~~G~~dg~vr~~Dln~~~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~k---------- 136 (323)
T KOG1036|consen 67 TIVTGGLDGQVRRYDLNTGNEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGK---------- 136 (323)
T ss_pred eEEEeccCceEEEEEecCCcceeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCc----------
Confidence 3678888999888887 44443322333333221112236689999999999999997522222222211
Q ss_pred hcccccccccchHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCc
Q 042769 114 KSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNV 166 (549)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~ 166 (549)
.+ +..+. ..++|.+|..|-.+..+|-++=+.
T Consensus 137 --------------kV--y~~~v------~g~~LvVg~~~r~v~iyDLRn~~~ 167 (323)
T KOG1036|consen 137 --------------KV--YCMDV------SGNRLVVGTSDRKVLIYDLRNLDE 167 (323)
T ss_pred --------------eE--EEEec------cCCEEEEeecCceEEEEEcccccc
Confidence 00 00111 126899999999999998655443
No 498
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=81.86 E-value=1.6 Score=47.81 Aligned_cols=102 Identities=20% Similarity=0.256 Sum_probs=72.3
Q ss_pred eeeecCCcchhhhccc-cc-cccCCc-chhhhhhcCCCccccc-ceeecceeeEEEEEEccccceeeecCCCCCCc-ccc
Q 042769 35 FFIDCGEDWGLYAHGL-LG-RMKLPQ-SIDDYVKTAPHITEEG-AVTLGSKTTTVFVLEAKTGRLIRTYGSPHSSS-TLQ 109 (549)
Q Consensus 35 ~~~~~~~d~~ly~~~~-~g-~~~~~~-~~~~~v~~sP~~~~dg-~v~~Gsk~~~~~~vda~tG~~~~~~~~~~~~~-~~~ 109 (549)
.++.|++|..+...|. ++ ...-.+ .-..+| .+=+++.+| .|..||.|+++..=|.+||+.+.++....... ++.
T Consensus 217 ~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v-~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~ 295 (456)
T KOG0266|consen 217 YLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYV-TSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLA 295 (456)
T ss_pred EEEEecCCceEEEeeccCCCeEEEEecCCCCce-EEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEE
Confidence 3688999999999997 33 332222 223445 444566677 89999999999999999999999888764211 000
Q ss_pred chhhhcccccccccchHHHHhhccCccccccccCceEEEEEcccceeecccCCCCCce
Q 042769 110 NEEQKSASYKHDKVNNEQLVKSGLTNTAELQHKEPYLLFITRTDYTLQSFEPNSDNVS 167 (549)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~r~d~~l~a~d~~~g~~~ 167 (549)
.++ ....|..++.|+.|+..|..+|..+
T Consensus 296 ------------------------f~~------d~~~l~s~s~d~~i~vwd~~~~~~~ 323 (456)
T KOG0266|consen 296 ------------------------FSP------DGNLLVSASYDGTIRVWDLETGSKL 323 (456)
T ss_pred ------------------------ECC------CCCEEEEcCCCccEEEEECCCCcee
Confidence 111 1267888888999999999888844
No 499
>PLN02876 acyl-CoA dehydrogenase
Probab=81.57 E-value=0.74 Score=54.28 Aligned_cols=103 Identities=13% Similarity=0.121 Sum_probs=60.6
Q ss_pred cccccccCCceEEEeeeecC---chhHHHHHHHH----HhhhhHHHHHHHHhcCCCCCe--eEEeeeccCc---ceEEEE
Q 042769 412 NTEIAKGSNGTVVYEGIYEG---RPVAVKRLVRA----LHDVAFKEIQNLIASDQHPNI--VRWYGVENDK---DFVYLS 479 (549)
Q Consensus 412 ~~~LG~G~fG~V~~~~~~~g---~~VAVK~i~~~----~~~~~~~Ei~~L~~~l~HpNI--Vrl~g~~~~~---~~~yLV 479 (549)
.+.|+.|.+..+|+-....+ ..+++|+.... ......+|+..|..+-.|++| .+++.+|.+. +..|+|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 35678888888776322222 35666654321 123466888776665346554 7888887764 457899
Q ss_pred ecccccc-hhhhhhhcccCCcccccCchhhhHHhhhe---eecccce
Q 042769 480 LERCTCS-LDDLIQTYSDSSCNSVFGEDQATRAMIEY---KLRLDSV 522 (549)
Q Consensus 480 mE~~~Gs-L~~~L~~~~~~~~~~~l~~~~~~~i~~qi---L~yLH~~ 522 (549)
|||++|. +.+-. ...++......+..++ |..||..
T Consensus 123 ME~v~G~~~~~~~--------~~~~~~~~r~~l~~~l~~~La~LH~v 161 (822)
T PLN02876 123 MEYLEGRIFVDPK--------LPGVAPERRRAIYRATAKVLAALHSA 161 (822)
T ss_pred EEecCCcccCCcc--------CCCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 9999984 32210 1123444445555555 6777764
No 500
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=81.56 E-value=0.74 Score=45.46 Aligned_cols=74 Identities=11% Similarity=-0.019 Sum_probs=42.5
Q ss_pred ccccCC-ceEEEeeeecCchhHHHHHHHHHhhhhHHHHHHHHhcCCCCCeeEEeeeccCcceEEEEeccccc-chhh
Q 042769 415 IAKGSN-GTVVYEGIYEGRPVAVKRLVRALHDVAFKEIQNLIASDQHPNIVRWYGVENDKDFVYLSLERCTC-SLDD 489 (549)
Q Consensus 415 LG~G~f-G~V~~~~~~~g~~VAVK~i~~~~~~~~~~Ei~~L~~~l~HpNIVrl~g~~~~~~~~yLVmE~~~G-sL~~ 489 (549)
|-.|.+ ..||.... .+..+.||+..........+|++.+..+-.+--+.+++++....+..++|||+++| +|.+
T Consensus 6 ~~~g~~~~~v~~~~~-~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 81 (244)
T cd05150 6 VTEGQSGATVYRLDG-KNPGLYLKIAPSGPTYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA 81 (244)
T ss_pred cCCCCCcCeEEEEcC-CCCcEEEEecCCCcccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence 344445 33343332 33566666554321224556776655443444566777777766678899999998 5543
Done!