Query 042770
Match_columns 75
No_of_seqs 208 out of 1195
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 16:13:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042770.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042770hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kci_A Putative acyl carrier p 99.9 4.8E-24 1.6E-28 115.8 6.7 73 1-73 5-77 (87)
2 2kjs_A Putative acyl carrier p 99.9 5.3E-24 1.8E-28 115.6 6.0 74 1-74 5-78 (87)
3 2l9f_A CALE8, meacp; transfera 99.9 1E-22 3.4E-27 112.8 7.4 73 1-74 17-91 (102)
4 3gzm_A Acyl carrier protein; h 99.9 1.8E-22 6.1E-27 107.6 5.7 72 2-73 9-80 (81)
5 4dxe_H ACP, acyl carrier prote 99.9 3.4E-22 1.2E-26 111.0 5.9 72 1-72 29-100 (101)
6 3ejb_A Acyl carrier protein; p 99.9 5.8E-22 2E-26 109.2 6.7 71 2-72 26-96 (97)
7 1vku_A Acyl carrier protein; T 99.8 2.8E-21 9.6E-26 107.1 6.8 71 2-73 21-91 (100)
8 2lol_A ACP, acyl carrier prote 99.8 5.8E-21 2E-25 101.4 7.2 71 2-72 10-80 (81)
9 2qnw_A Acyl carrier protein; m 99.8 3.1E-21 1.1E-25 102.9 5.8 71 2-72 11-81 (82)
10 1l0i_A Acyl carrier protein; a 99.8 5.8E-21 2E-25 100.8 6.5 71 2-72 7-77 (78)
11 2l4b_A Acyl carrier protein; i 99.8 1.4E-21 4.9E-26 105.5 4.2 73 2-74 12-87 (88)
12 2kwl_A ACP, acyl carrier prote 99.8 5.1E-21 1.8E-25 102.4 6.2 71 2-72 13-83 (84)
13 3ce7_A Specific mitochodrial a 99.8 1E-20 3.5E-25 105.9 7.1 72 2-74 23-99 (107)
14 2cnr_A FAS, ACP, acyl carrier 99.8 1.7E-20 5.9E-25 99.6 7.3 71 2-72 11-81 (82)
15 2ava_A ACP I, acyl carrier pro 99.8 8.3E-21 2.9E-25 101.1 5.9 72 2-74 8-80 (82)
16 2lki_A Putative uncharacterize 99.8 2.6E-20 9.1E-25 104.0 8.0 72 2-73 28-104 (105)
17 2kw2_A Specialized acyl carrie 99.8 7.6E-21 2.6E-25 105.3 5.5 72 2-73 7-89 (101)
18 1f80_D Acyl carrier protein; t 99.8 6.3E-21 2.2E-25 101.3 4.9 70 2-71 11-80 (81)
19 2dnw_A Acyl carrier protein; A 99.8 2.5E-20 8.5E-25 102.7 7.3 73 2-74 19-91 (99)
20 2amw_A Hypothetical protein NE 99.8 2.3E-20 7.8E-25 99.8 6.9 73 1-73 5-82 (83)
21 1dv5_A APO-DCP, APO-D-alanyl c 99.8 1.2E-20 4.2E-25 100.5 5.6 70 2-72 8-80 (80)
22 1af8_A Actinorhodin polyketide 99.8 8.6E-21 2.9E-25 101.9 4.9 72 2-74 9-84 (86)
23 1klp_A ACP, ACPM, meromycolate 99.8 3.7E-20 1.3E-24 104.5 7.3 73 2-74 11-83 (115)
24 1x3o_A Acyl carrier protein; s 99.8 3.3E-20 1.1E-24 98.0 6.6 71 2-72 9-79 (80)
25 2lte_A Specialized acyl carrie 99.7 1.6E-21 5.6E-26 108.6 0.0 73 1-74 29-101 (103)
26 1or5_A Acyl carrier protein; A 99.8 1.8E-20 6.2E-25 100.0 4.1 72 2-74 8-82 (83)
27 2ehs_A ACP, acyl carrier prote 99.8 1E-19 3.6E-24 95.4 6.5 72 2-73 5-76 (77)
28 2cgq_A Acyl carrier protein AC 99.8 8.7E-20 3E-24 103.1 5.9 68 2-74 34-101 (113)
29 1nq4_A Oxytetracycline polyket 99.8 1.1E-19 3.8E-24 99.6 6.0 71 2-73 8-82 (95)
30 2jq4_A AGR_C_4658P, hypothetic 99.8 1.2E-18 4E-23 97.2 6.6 71 2-73 26-100 (105)
31 2l3v_A ACP, acyl carrier prote 99.8 2.1E-20 7.2E-25 98.7 -1.3 71 2-72 8-78 (79)
32 1fh1_A NODF, nodulation protei 99.7 5.3E-20 1.8E-24 100.3 -1.3 72 2-74 8-90 (92)
33 2cg5_B Fatty acid synthase; tr 99.7 3.2E-17 1.1E-21 89.5 7.6 70 1-72 9-79 (91)
34 2kr5_A PKS, aflatoxin biosynth 99.7 2.1E-17 7.1E-22 88.8 5.9 72 2-74 15-88 (89)
35 2afd_A Protein ASL1650; twiste 99.7 5.9E-17 2E-21 86.5 6.8 70 2-72 18-87 (88)
36 2liu_A CURA; holo state, trans 99.7 1.7E-16 5.8E-21 86.4 5.6 71 2-73 25-95 (99)
37 2ju1_A Erythronolide synthase; 99.6 1.5E-16 5.3E-21 86.3 4.8 70 2-72 24-94 (95)
38 2l22_A Mupirocin didomain acyl 99.6 8.9E-16 3.1E-20 93.7 6.8 71 2-73 30-100 (212)
39 4i4d_A Peptide synthetase NRPS 99.6 1.9E-15 6.4E-20 82.2 7.1 70 2-74 20-89 (93)
40 1dny_A Non-ribosomal peptide s 99.6 7.3E-15 2.5E-19 79.7 7.0 67 2-71 18-84 (91)
41 2l22_A Mupirocin didomain acyl 99.6 1.1E-14 3.7E-19 88.9 7.9 71 2-73 134-204 (212)
42 2cq8_A 10-formyltetrahydrofola 99.3 3.7E-12 1.3E-16 71.4 5.4 69 2-72 29-98 (110)
43 3tej_A Enterobactin synthase c 99.3 2.1E-11 7.2E-16 77.8 7.6 68 2-72 15-82 (329)
44 2fq1_A Isochorismatase; ENTB, 99.1 1.8E-10 6.2E-15 73.1 5.3 67 2-71 219-285 (287)
45 2jgp_A Tyrocidine synthetase 3 99.0 7.8E-10 2.7E-14 73.7 7.3 67 2-71 14-80 (520)
46 2vsq_A Surfactin synthetase su 98.8 1E-08 3.4E-13 75.0 5.7 68 2-72 976-1043(1304)
47 4f6l_B AUSA reductase domain p 98.8 9E-10 3.1E-14 73.8 0.0 67 2-72 49-115 (508)
48 3rg2_A Enterobactin synthase c 98.7 2.3E-08 7.9E-13 68.2 6.3 68 2-72 549-616 (617)
49 4dg8_A PA1221; ANL superfamily 98.7 2.5E-09 8.5E-14 73.4 0.0 68 2-72 528-596 (620)
50 2vz8_A Fatty acid synthase; tr 98.3 6.7E-08 2.3E-12 74.6 0.0 68 2-71 2127-2195(2512)
51 2px6_A Thioesterase domain; th 96.2 0.00062 2.1E-08 42.7 -0.6 37 29-65 1-37 (316)
52 1dd4_C 50S ribosomal protein L 91.6 0.25 8.5E-06 22.5 3.0 21 29-49 12-32 (40)
53 3zen_D Fatty acid synthase; tr 90.4 0.051 1.8E-06 43.9 0.0 51 2-53 1798-1849(3089)
54 1zav_U 50S ribosomal protein L 88.2 0.49 1.7E-05 20.1 2.4 19 29-47 12-30 (30)
55 3ufe_A Transcriptional antiter 73.0 2.9 9.9E-05 21.9 2.5 21 35-55 79-99 (111)
56 1q1v_A DEK protein; winged-hel 63.1 8 0.00027 19.4 2.7 26 28-53 28-54 (70)
57 3lae_A UPF0053 protein HI0107; 62.7 8.1 0.00028 19.4 2.8 25 41-68 21-45 (81)
58 2pls_A CBS domain protein; APC 62.6 13 0.00045 18.8 3.6 31 40-70 20-51 (86)
59 3llb_A Uncharacterized protein 62.4 13 0.00046 18.7 3.7 28 40-70 20-47 (83)
60 3rio_A PTSGHI operon antitermi 61.9 6.7 0.00023 22.8 2.7 21 35-55 147-167 (180)
61 2rk5_A Putative hemolysin; str 61.5 14 0.00048 18.7 3.6 26 40-68 19-44 (87)
62 2oai_A Hemolysin; PFAM03471, x 60.8 10 0.00036 19.6 3.1 31 40-70 29-59 (94)
63 2jve_A PROD1; LY-6, three-fing 60.3 3.7 0.00013 20.9 1.1 25 48-72 48-72 (91)
64 2bnk_A Early protein GP16.7; D 59.7 9.4 0.00032 18.7 2.5 30 43-72 16-50 (67)
65 2zjq_5 50S ribosomal protein L 58.5 9.5 0.00032 21.3 2.7 22 29-50 14-35 (122)
66 2j01_L 50S ribosomal protein L 57.9 9.8 0.00034 21.4 2.7 22 29-50 14-35 (125)
67 2r2z_A Hemolysin; APC85144, en 57.5 18 0.00061 18.5 3.7 27 40-69 27-53 (93)
68 2p3h_A Uncharacterized CBS dom 56.6 17 0.00057 19.3 3.5 27 40-69 23-49 (101)
69 2pli_A Uncharacterized protein 55.9 18 0.00063 18.5 3.5 27 40-69 29-55 (91)
70 2ftc_E L12MT, MRP-L12, 39S rib 55.2 12 0.00041 21.3 2.8 21 29-49 12-32 (137)
71 3ded_A Probable hemolysin; str 54.5 22 0.00077 19.1 3.8 32 39-70 45-78 (113)
72 2pag_A Hypothetical protein; n 53.4 7.7 0.00026 21.6 1.9 19 36-54 24-42 (135)
73 1dd3_A 50S ribosomal protein L 53.4 9.8 0.00033 21.5 2.2 21 29-49 12-32 (128)
74 2p13_A CBS domain; alpha-beta 50.2 24 0.00083 17.9 3.6 29 40-69 26-54 (90)
75 3gaa_A Uncharacterized protein 50.0 25 0.00085 21.6 3.9 26 30-55 194-219 (252)
76 2p4p_A Hypothetical protein HD 47.8 26 0.0009 17.6 3.5 28 40-69 20-48 (86)
77 2prv_A Uncharacterized protein 45.9 12 0.00041 21.0 1.9 18 37-54 27-44 (153)
78 3d5p_A Putative glucan synthes 45.5 12 0.00042 20.8 1.9 18 37-54 18-35 (144)
79 2icg_A LIN2918 protein; hypoth 44.3 13 0.00044 20.9 1.9 19 36-54 29-47 (160)
80 3id6_A NOP5, PRE mRNA splicing 44.2 25 0.00087 22.1 3.3 38 23-61 199-236 (268)
81 3nxh_A Transcriptional regulat 43.0 18 0.00061 22.6 2.5 34 35-68 73-106 (269)
82 1jrm_A MTH0637, conserved hypo 42.4 8.9 0.0003 20.7 0.9 50 2-51 55-104 (104)
83 1h99_A Transcription antitermi 40.1 19 0.00066 20.7 2.3 21 35-55 80-100 (224)
84 2uv8_A Fatty acid synthase sub 37.8 1.5E+02 0.005 24.0 7.0 49 2-52 150-199 (1887)
85 1d0q_A DNA primase; zinc-bindi 37.5 20 0.00067 18.9 1.8 20 35-54 82-101 (103)
86 3pe5_A Uncharacterized protein 36.0 34 0.0012 22.9 3.1 32 37-68 175-206 (403)
87 4de9_A Putative transcriptiona 35.4 21 0.00071 22.5 2.0 34 35-68 97-130 (286)
88 3a2k_A TRNA(Ile)-lysidine synt 34.0 23 0.0008 23.6 2.1 26 27-52 26-51 (464)
89 2hfk_A Pikromycin, type I poly 32.9 3.3 0.00011 25.5 -2.0 33 2-47 32-64 (319)
90 3qfi_A Transcriptional regulat 32.9 24 0.00083 22.5 2.0 34 35-68 88-121 (301)
91 3o3m_A Alpha subunit 2-hydroxy 32.7 51 0.0018 21.5 3.6 21 35-55 160-180 (408)
92 2k84_A P9; HOST-virus interact 32.3 11 0.00039 15.6 0.2 8 26-33 21-28 (30)
93 3o3m_B Beta subunit 2-hydroxya 32.3 53 0.0018 21.3 3.5 21 35-55 140-160 (385)
94 3okz_A Putative uncharacterize 31.5 26 0.00089 22.4 1.9 33 36-68 95-127 (306)
95 2o3g_A Putative protein; APC85 31.4 36 0.0012 17.3 2.2 28 40-69 28-56 (92)
96 4b4k_A N5-carboxyaminoimidazol 30.5 88 0.003 18.6 4.1 44 29-72 30-74 (181)
97 1w4t_A Arylamine N-acetyltrans 30.4 44 0.0015 21.1 2.8 20 36-55 266-285 (299)
98 3b1l_X E3 ubiquitin-protein li 35.9 11 0.00038 18.1 0.0 14 3-16 26-39 (76)
99 3sgf_J 50S ribosomal protein L 29.5 4.9 0.00017 22.5 -1.5 21 29-49 14-34 (121)
100 1h3o_B Transcription initiatio 29.4 32 0.0011 17.5 1.7 22 29-50 55-76 (76)
101 3ohs_X Trans-1,2-dihydrobenzen 29.0 46 0.0016 20.7 2.8 24 30-53 309-332 (334)
102 3pyf_A 4-diphosphocytidyl-2-C- 26.9 96 0.0033 19.3 4.0 54 4-57 76-132 (306)
103 3po0_A Small archaeal modifier 26.6 64 0.0022 16.0 2.7 31 41-71 10-40 (89)
104 2blf_B SORB, sulfite\:cytochro 24.4 73 0.0025 15.6 3.1 28 38-71 53-80 (81)
105 1n91_A ORF, hypothetical prote 24.3 28 0.00096 18.9 1.0 18 2-19 54-71 (108)
106 2v8p_A 4-diphosphocytidyl-2-C- 24.1 1.2E+02 0.0042 18.2 4.4 52 5-56 70-124 (271)
107 2xxp_A CPS2A; replication, pep 23.3 43 0.0015 22.0 1.9 33 36-68 197-229 (398)
108 1zun_A Sulfate adenylyltransfe 23.0 55 0.0019 20.8 2.3 26 27-52 54-79 (325)
109 3pvv_A Chromosomal replication 22.8 11 0.00039 20.1 -0.8 66 2-72 9-78 (101)
110 2kxo_A Cell division topologic 22.6 31 0.0011 18.3 0.9 18 2-19 46-63 (95)
111 3qoe_A Heterocyst differentiat 22.2 1.2E+02 0.0042 18.9 3.6 48 23-72 146-193 (302)
112 3mnf_A PAC2 family protein; PS 21.8 1E+02 0.0034 18.9 3.3 26 30-55 190-215 (250)
113 1j1v_A Chromosomal replication 21.6 12 0.00042 19.5 -0.8 66 2-72 5-75 (94)
114 1h72_C HK, homoserine kinase; 21.6 1.4E+02 0.0049 17.9 4.0 52 6-57 66-120 (296)
115 1dtc_A Acetyl-delta-toxin; NMR 21.5 46 0.0016 13.2 1.1 14 58-71 6-19 (26)
116 3d9w_A Putative acetyltransfer 20.6 38 0.0013 21.3 1.2 23 35-57 256-278 (293)
117 1ni5_A Putative cell cycle pro 20.5 36 0.0012 22.5 1.1 24 27-50 21-45 (433)
118 3m20_A 4-oxalocrotonate tautom 20.2 57 0.0019 15.0 1.6 17 2-18 21-37 (62)
No 1
>2kci_A Putative acyl carrier protein; alpha, ACP, PCP, structural genomics, unknown function, PSI- 2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 2kjs_A* 2lml_A* 2kwm_A*
Probab=99.90 E-value=4.8e-24 Score=115.82 Aligned_cols=73 Identities=10% Similarity=0.198 Sum_probs=69.6
Q ss_pred ChHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhc
Q 042770 1 DPIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQ 73 (75)
Q Consensus 1 ~~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~ 73 (75)
+++++++++.+++++++++++++|.+++|||||+++++++++|++||++||++++.++.|++++++||.++.+
T Consensus 5 ekv~~il~e~l~~d~~~i~~d~~l~~dlg~DSL~~veli~~lE~eF~I~i~~ed~~~~~Tv~dlv~~I~~~~~ 77 (87)
T 2kci_A 5 DALTPIFRQVFDDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLA 77 (87)
T ss_dssp HHHHHHHHHHTTCSCCCCCTTCCSTTCCCCCSTHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHCCCCCCcccccCCChHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999889999999999999999999999999999999999999999998764
No 2
>2kjs_A Putative acyl carrier protein; alpha, ACP, PNS, structural genomics, PSI-2, protein structure initiative; HET: PNS; NMR {Geobacter metallireducens gs-15} PDB: 2lml_A* 2kwm_A*
Probab=99.90 E-value=5.3e-24 Score=115.60 Aligned_cols=74 Identities=9% Similarity=0.191 Sum_probs=70.4
Q ss_pred ChHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhcC
Q 042770 1 DPIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQG 74 (75)
Q Consensus 1 ~~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~~ 74 (75)
+++++++++.+++++..|+|+++|.+++|||||+.++++..+|++||++||..++.+++||+++++||.+++++
T Consensus 5 e~l~~I~~e~l~~d~~~i~~~~~~~d~lg~DSL~~veli~~ie~~fgi~i~~~~l~~~~TV~dl~~~I~~kl~~ 78 (87)
T 2kjs_A 5 DALTPIFRQVFDDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLAR 78 (87)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTCCSTTCSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCccccCCCCCcccCCCCChHHHHHHHHHHHHHhCceecHHHHHcCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999987799999999999999999999999999999999999999999998764
No 3
>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}
Probab=99.88 E-value=1e-22 Score=112.85 Aligned_cols=73 Identities=8% Similarity=0.107 Sum_probs=67.8
Q ss_pred ChHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhh--ccHHHHHHHHHhhhcC
Q 042770 1 DPIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADII--NTINMAVNFTASHCQG 74 (75)
Q Consensus 1 ~~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~--~tv~~l~~~i~~~~~~ 74 (75)
++|++++++.+|++++.++|+++|.+|||+|||+.++|++.+|++||+++|.+ ..++ .||+++++||.++.+.
T Consensus 17 ~~V~~ilaE~lev~~e~Vtpda~l~dDLglDSLd~VeLVm~lE~~fGi~ipd~-~e~~~~~TV~d~vdyI~~~~~~ 91 (102)
T 2l9f_A 17 ELVRHLVAERAELPVEVLRDDSRFLDDLHMSSITVGQLVNEAARAMGLSAVAM-PTNFATATVREMAEALEARERE 91 (102)
T ss_dssp HHHHHHHHHHTTSCSSSCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCSTTSS-CSCCTTCBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCHHHcCCCcchhhhcCCcHHHHHHHHHHHHHHhCCCCCcc-HHHHHHccHHHHHHHHHHhhcc
Confidence 36899999999999999999999999999999999999999999999999987 6667 9999999999998753
No 4
>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*
Probab=99.87 E-value=1.8e-22 Score=107.61 Aligned_cols=72 Identities=36% Similarity=0.573 Sum_probs=68.2
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhc
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQ 73 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~ 73 (75)
++++++++.+++++++++++++|.+++|+||+++++++..+|++||+++|..++.++.|++++++|+.++++
T Consensus 9 ~l~~ii~~~l~~~~~~i~~d~~l~~dlg~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~ 80 (81)
T 3gzm_A 9 DIKKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEKNNK 80 (81)
T ss_dssp HHHHHHHHHHTCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC-
T ss_pred HHHHHHHHHhCcCHHHCCCCCcchhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHhc
Confidence 688999999999999999999996699999999999999999999999999999999999999999998865
No 5
>4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus}
Probab=99.86 E-value=3.4e-22 Score=111.00 Aligned_cols=72 Identities=47% Similarity=0.665 Sum_probs=66.3
Q ss_pred ChHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 1 DPIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 1 ~~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
+++++++++.+++++++++++++|..++|||||++++|+..+|++||++||++++.++.|++++++||.+++
T Consensus 29 ~~l~~iiae~l~~~~~~I~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~Tv~dl~~~I~~~~ 100 (101)
T 4dxe_H 29 DKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINSLE 100 (101)
T ss_dssp HHHHHHHHHTTCCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCBHHHHHHHHC---
T ss_pred HHHHHHHHHHHCcChhhCCCCCcchhhcCCCcHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHcc
Confidence 368899999999999999999999679999999999999999999999999999999999999999998765
No 6
>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A*
Probab=99.86 E-value=5.8e-22 Score=109.25 Aligned_cols=71 Identities=44% Similarity=0.631 Sum_probs=67.4
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
++++++++.+++++++++++++|.+++|+|||++++++..+|++||+++|.+++.++.|++++++||.+++
T Consensus 26 ~l~~iia~~l~~~~~~i~~d~~l~~dLGlDSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~ 96 (97)
T 3ejb_A 26 RVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQ 96 (97)
T ss_dssp HHHHHHHHHSCCCTTTSCTTCBTTTTTCCCTTHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHHHHC-
T ss_pred HHHHHHHHHHCcCHHHCCCCCCchhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHHhc
Confidence 68899999999999999999999779999999999999999999999999999999999999999998875
No 7
>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1
Probab=99.85 E-value=2.8e-21 Score=107.13 Aligned_cols=71 Identities=21% Similarity=0.432 Sum_probs=67.8
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhc
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQ 73 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~ 73 (75)
++++++++.+++++++++++++| .++|+|||++++|+..+|++||++||..++.++.|++++++||.++++
T Consensus 21 ~l~~ila~~l~v~~~~I~~d~~L-~dLGlDSL~~veL~~~LE~~fgi~i~~~~l~~~~TV~~L~~~I~~~~~ 91 (100)
T 1vku_A 21 KFVEIASEKMGKDLETVDEENTF-KELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKLE 91 (100)
T ss_dssp HHHHHHHHTTCCCCCSCCTTSBT-TTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHCCCCCCH-HHcCCchHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHHhh
Confidence 58899999999999999999999 699999999999999999999999999999999999999999998764
No 8
>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}
Probab=99.84 E-value=5.8e-21 Score=101.39 Aligned_cols=71 Identities=34% Similarity=0.552 Sum_probs=67.3
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
++++++++.+++++++++++++|..++|+||+++++++..+|++||+++|..++.++.|++++++++.+++
T Consensus 10 ~l~~ii~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 80 (81)
T 2lol_A 10 KVIEMVAEKLNKDKAIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDIPDDEATKIKTVSDVIKYIKERQ 80 (81)
T ss_dssp HHHHHHHHHSCCCTTTCCTTCCHHHHTTCCHHHHHHHHHHHHHHHCCCCCGGGGGGSSSHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCChhhCCCCCcHHHhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 57899999999999999999999669999999999999999999999999999999999999999998875
No 9
>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii}
Probab=99.84 E-value=3.1e-21 Score=102.89 Aligned_cols=71 Identities=35% Similarity=0.552 Sum_probs=67.5
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
++++++++.+++++++++++++|..++|+||+++++++..+|++||+++|..++.++.|++++++|+.+++
T Consensus 11 ~l~~ii~~~l~~~~~~i~~d~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 81 (82)
T 2qnw_A 11 RVKDVVADQLGVDRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALSYIEKAK 81 (82)
T ss_dssp HHHHHHHHHHCCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHhhCCCccchhhccCCcHHHHHHHHHHHHHHHCCcCCHHHHHHcCCHHHHHHHHHHhc
Confidence 68899999999999999999999669999999999999999999999999999999999999999998875
No 10
>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A
Probab=99.84 E-value=5.8e-21 Score=100.79 Aligned_cols=71 Identities=42% Similarity=0.624 Sum_probs=67.3
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
++++++++.+++++++++++++|.+++|+||+++++++..+|++||+++|..++.++.|++++++++.++.
T Consensus 7 ~l~~~~~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~ 77 (78)
T 1l0i_A 7 RVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKMTTVQAAIDYINGHQ 77 (78)
T ss_dssp HHHHHHHHHHTCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 67899999999999999999999669999999999999999999999999999999999999999998765
No 11
>2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum}
Probab=99.84 E-value=1.4e-21 Score=105.48 Aligned_cols=73 Identities=25% Similarity=0.485 Sum_probs=68.5
Q ss_pred hHHHHHHhhh---CCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhcC
Q 042770 2 PIISVIKNFQ---NVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQG 74 (75)
Q Consensus 2 ~v~~ii~~~~---~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~~ 74 (75)
++++++++.+ ++++++++++++|..++|+||+++++++..+|++||+++|..++.++.|++++++||.+++++
T Consensus 12 ~v~~~i~~~l~~~~~~~~~i~~d~~l~~dlglDSl~~vel~~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~~ 87 (88)
T 2l4b_A 12 QVMESVIGCLKLNDEQKQILSGTTNLAKDFNLDSLDFVDLIMSLEERFSLEISDEDAQKLETVDDICRYIASKSSD 87 (88)
T ss_dssp HHHHHHHHHHTCCHHHHHSCCTTSCTTTTTTCCHHHHHHHHHHHHHHTTCCCCHHHHHTCCSHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHhhCCCCHhhCCCCCchhhccCCcHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHhhcc
Confidence 6788999999 888889999999966999999999999999999999999999999999999999999998765
No 12
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=99.84 E-value=5.1e-21 Score=102.37 Aligned_cols=71 Identities=32% Similarity=0.464 Sum_probs=67.4
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
++++++++.+++++++++++++|..++|+||+++++++..+|++||+++|..++.++.|++++++|+.+++
T Consensus 13 ~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 83 (84)
T 2kwl_A 13 KVRSIISEQLDKKEDEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKIPENEANEFETVGDVVNFIKKRK 83 (84)
T ss_dssp HHHHHHHHHHCCCGGGCCTTTHHHHTSSSCHHHHHHHHHHHHHHHTCCTTTTGGGGCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcccCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHHHc
Confidence 57899999999999999999999669999999999999999999999999999999999999999999875
No 13
>3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma}
Probab=99.83 E-value=1e-20 Score=105.92 Aligned_cols=72 Identities=29% Similarity=0.391 Sum_probs=67.4
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcc-----cccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhcC
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQ-----IDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQG 74 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~-----~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~~ 74 (75)
+|++++++.++ ++.+++++++|. ++||||||++++|+..||++||++||++++.++.|++++++||.++.++
T Consensus 23 ~i~~il~e~l~-~~~~i~~d~~l~~~~~~~dLglDSL~~veli~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~~ 99 (107)
T 3ce7_A 23 YIVGMCQKFLQ-KGEKVTPSSKLEELRTREDRLWDCLDTVEFVLDVEEIFDVTVPDEVADNFQTLQEIADFVVSERAK 99 (107)
T ss_dssp HHHHHHHTTBC-TTCCCCTTSCGGGSBBTTSSBCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhC-CccccCCCCcccccCcccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHhcCCHHHHHHHHHHHHHH
Confidence 57889999999 889999999996 7999999999999999999999999999999999999999999988753
No 14
>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*
Probab=99.83 E-value=1.7e-20 Score=99.60 Aligned_cols=71 Identities=25% Similarity=0.478 Sum_probs=67.3
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
++++++++.+++++++++++++|..++|+||+.+++++..+|++||+++|..++.++.|++++++++.+++
T Consensus 11 ~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 81 (82)
T 2cnr_A 11 GLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILDHQ 81 (82)
T ss_dssp HHHHHHHHHSCCCTTTCCTTSBTTTTSCCCHHHHHHHHHHHHGGGTBCCCGGGGGTCSBHHHHHHHHHHSB
T ss_pred HHHHHHHHHhCCCHHHCCCCcchhhccCCChHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHHc
Confidence 57899999999999999999999669999999999999999999999999999999999999999998875
No 15
>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*
Probab=99.83 E-value=8.3e-21 Score=101.07 Aligned_cols=72 Identities=33% Similarity=0.502 Sum_probs=67.7
Q ss_pred hHHHHHHhhhCCCCC-CCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhcC
Q 042770 2 PIISVIKNFQNVDPF-KVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQG 74 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~-~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~~ 74 (75)
++++++++.++++++ +++++++|. ++|+|||++++++..+|++||+++|..++.++.|++++++|+.+++++
T Consensus 8 ~l~~i~~~~l~~~~~~~i~~~~~l~-dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~~ 80 (82)
T 2ava_A 8 KVSDIVKEKLALGADVVVTADSEFS-KLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEGLLEK 80 (82)
T ss_dssp HHHHHHHHHTTCSSSSCCCSSCCSC-CCTTCCSCHHHHHHHHHHHTTCCCCGGGSSSCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcccccCCCCchh-hcCCCHHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHHhc
Confidence 678999999999987 899999997 999999999999999999999999999999999999999999987653
No 16
>2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea}
Probab=99.83 E-value=2.6e-20 Score=104.00 Aligned_cols=72 Identities=19% Similarity=0.362 Sum_probs=67.1
Q ss_pred hHHHHHHhhhCCC--CCCCCCCCCcccccCc-chhHHHHHHHHHHHHhCCcCCcch--hhhhccHHHHHHHHHhhhc
Q 042770 2 PIISVIKNFQNVD--PFKVTTNGHFQIDLGL-DNLDFVEIVMALKEEFGFEIPDNE--ADIINTINMAVNFTASHCQ 73 (75)
Q Consensus 2 ~v~~ii~~~~~~~--~~~i~~~~~l~~dlgl-DSl~~v~l~~~le~~f~i~i~~~~--~~~~~tv~~l~~~i~~~~~ 73 (75)
+|++++++.++++ +.+++++++|.+++|+ ||+++++|++.||++||++||+++ ..++.|++++++||.++++
T Consensus 28 ~i~~il~e~l~~~~~~~~i~~d~~L~~dLGl~DSL~~veLi~~lE~~FgI~I~~eel~~~~~~Tv~~l~~~I~~~~~ 104 (105)
T 2lki_A 28 AVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALFVEHKLS 104 (105)
T ss_dssp HHHHHHHHHTTCTTGGGTCCTTSBCBTTBTTCCHHHHHHHHHHHHHHHTSCCCGGGCCGGGGSBHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCcccccCCCCCchhhhcCcccHHHHHHHHHHHHHHhCCCcCHHHhhHHhcCCHHHHHHHHHHHhc
Confidence 6889999999998 7899999999878999 999999999999999999999999 5689999999999998764
No 17
>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A
Probab=99.83 E-value=7.6e-21 Score=105.32 Aligned_cols=72 Identities=22% Similarity=0.397 Sum_probs=66.1
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcch------hhhhcc-----HHHHHHHHHh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNE------ADIINT-----INMAVNFTAS 70 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~------~~~~~t-----v~~l~~~i~~ 70 (75)
+|++++++.+++++++++++++|.+++||||+++++|+..||++||++||+++ +.++.| ++++++||.+
T Consensus 7 ~v~~ii~~~l~~~~~~i~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~~~~~~~T~~~~Tv~~l~~~i~~ 86 (101)
T 2kw2_A 7 RVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNLAARIDE 86 (101)
T ss_dssp HHHHHHHHHHCCCGGGCCTTCBCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSSCHHHHHBHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHhhCCCCcchHHhcCCCHHHHHHHHHHHHHHHCCccCHHHhcchhhhhhccCCCcCcHHHHHHHHHH
Confidence 68899999999999999999999779999999999999999999999999987 556777 9999999998
Q ss_pred hhc
Q 042770 71 HCQ 73 (75)
Q Consensus 71 ~~~ 73 (75)
+++
T Consensus 87 ~~~ 89 (101)
T 2kw2_A 87 LVA 89 (101)
T ss_dssp HHH
T ss_pred Hhc
Confidence 764
No 18
>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A
Probab=99.83 E-value=6.3e-21 Score=101.26 Aligned_cols=70 Identities=39% Similarity=0.605 Sum_probs=65.0
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASH 71 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~ 71 (75)
++++++++.+++++++++++++|..++|+||+++++++..+|++||+++|..++.++.|++++++++.++
T Consensus 11 ~l~~~l~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 80 (81)
T 1f80_D 11 RVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQNQ 80 (81)
T ss_dssp HHHHHHHHHSSCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHCC--
T ss_pred HHHHHHHHHHCCCHHhCCCccchHHHcCCcHHHHHHHHHHHHHHhCCccCHHHHHHCCCHHHHHHHHHhh
Confidence 5788999999999999999999955999999999999999999999999999999999999999998765
No 19
>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=2.5e-20 Score=102.73 Aligned_cols=73 Identities=42% Similarity=0.720 Sum_probs=68.3
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhcC
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQG 74 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~~ 74 (75)
+|++++++.+++++++++++++|..++|+|||++++++..||++||++||..++.++.|++++++||.+++++
T Consensus 19 ~l~~~l~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~~~ 91 (99)
T 2dnw_A 19 RVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIADKKDV 91 (99)
T ss_dssp HHHHHHHHCTTSCTTTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCSHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHhCCCHhhCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHHHhcc
Confidence 5788999999999999999999966999999999999999999999999999999999999999999988653
No 20
>2amw_A Hypothetical protein NE2163; all helical protein, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.83 E-value=2.3e-20 Score=99.85 Aligned_cols=73 Identities=18% Similarity=0.353 Sum_probs=67.0
Q ss_pred ChHHHHHHhhhCCC--CCCCCCCCCcccccCc-chhHHHHHHHHHHHHhCCcCCcchhh--hhccHHHHHHHHHhhhc
Q 042770 1 DPIISVIKNFQNVD--PFKVTTNGHFQIDLGL-DNLDFVEIVMALKEEFGFEIPDNEAD--IINTINMAVNFTASHCQ 73 (75)
Q Consensus 1 ~~v~~ii~~~~~~~--~~~i~~~~~l~~dlgl-DSl~~v~l~~~le~~f~i~i~~~~~~--~~~tv~~l~~~i~~~~~ 73 (75)
+++++++++.++++ +++++++++|.+++|+ ||+++++++..+|++||+++|++++. ++.|++++++|+.++++
T Consensus 5 ~~l~~il~~~l~~~~~~~~i~~d~~l~~dlg~~DSl~~~elv~~lE~~fgi~i~~~~l~~~~~~Tv~~l~~~i~~~~~ 82 (83)
T 2amw_A 5 EAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALFVEHKLS 82 (83)
T ss_dssp HHHHHHHHHHTTCGGGGGSCCTTSCSTTTSTTTTHHHHHHHHHHHHHHTTCCCCTTTCCGGGSSSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCccccCCCcchhhhccCccCHHHHHHHHHHHHHHhCCeeCHHhhhHHhcCCHHHHHHHHHHHhc
Confidence 36899999999998 8899999999878999 99999999999999999999999964 49999999999998764
No 21
>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A
Probab=99.82 E-value=1.2e-20 Score=100.52 Aligned_cols=70 Identities=20% Similarity=0.374 Sum_probs=64.7
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccC-cchhHHHHHHHHHHHHhCCcCCcchhh--hhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLG-LDNLDFVEIVMALKEEFGFEIPDNEAD--IINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlg-lDSl~~v~l~~~le~~f~i~i~~~~~~--~~~tv~~l~~~i~~~~ 72 (75)
++++++++.++.++.+++++++|. ++| +||+++++|++.+|++||++||++++. ++.|++++++||.+++
T Consensus 8 ~i~~il~~~~~~~~~~i~~d~~l~-~~g~lDSl~~velv~~lE~~fgi~i~~~~~~~~~~~Tv~~l~~~i~~~~ 80 (80)
T 1dv5_A 8 GVLDILADLTGSDDVKKNLDLNLF-ETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQAQ 80 (80)
T ss_dssp HHHHHHHHHHTSSSTTTCSSCCSS-TTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCcccCCCCcchh-hccCcChHHHHHHHHHHHHHhCCcCCHHHcCHHhcCCHHHHHHHHHHcC
Confidence 688999999999888999999997 666 999999999999999999999999986 9999999999998763
No 22
>1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A*
Probab=99.82 E-value=8.6e-21 Score=101.88 Aligned_cols=72 Identities=18% Similarity=0.262 Sum_probs=67.2
Q ss_pred hHHHHHHhhhCCCCC----CCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhcC
Q 042770 2 PIISVIKNFQNVDPF----KVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQG 74 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~----~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~~ 74 (75)
++++++++.+++++. +++++++| .++|+||+++++++..+|++||+++|..++.++.|++++++|+.+++++
T Consensus 9 ~l~~il~~~l~~~~~~~~~~i~~~~~l-~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~~ 84 (86)
T 1af8_A 9 DLRRALVECAGETDGTDLSGDFLDLRF-EDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAE 84 (86)
T ss_dssp HHHHHHHTTCCCCSCCCTTTCSSTTST-TTTTCCTTTHHHHHHHHTTTTCSCCCTTTTTTCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcccccccCCCCCCh-hhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHhhc
Confidence 688999999999877 78999999 5999999999999999999999999999999999999999999988653
No 23
>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1
Probab=99.82 E-value=3.7e-20 Score=104.49 Aligned_cols=73 Identities=25% Similarity=0.487 Sum_probs=68.5
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhcC
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQG 74 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~~ 74 (75)
++++++++.+++++.+++++++|..++|+|||++++++..+|++||++||..++.++.|++++++||.++.++
T Consensus 11 ~l~~il~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~~~ 83 (115)
T 1klp_A 11 GIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKLEEE 83 (115)
T ss_dssp HHHHHHHHHTCCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhCcCHHhCCCCCchhhccCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHHHcc
Confidence 5788999999999999999999966999999999999999999999999999999999999999999987653
No 24
>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus}
Probab=99.82 E-value=3.3e-20 Score=98.00 Aligned_cols=71 Identities=42% Similarity=0.650 Sum_probs=67.1
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
++++++++.+++++++++++++|..++|+||+.+++++..+|++||+++|..++.++.|++++++++.+++
T Consensus 9 ~l~~~i~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 79 (80)
T 1x3o_A 9 KVKAVIADKLQVEPEKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDEEAEKIRTVKDAVEYIKAKL 79 (80)
T ss_dssp HHHHHHHHHHTCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHCCCcCcHHhhcCccHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHc
Confidence 57889999999999999999999559999999999999999999999999999999999999999998875
No 25
>2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa}
Probab=99.69 E-value=1.6e-21 Score=108.56 Aligned_cols=73 Identities=23% Similarity=0.434 Sum_probs=69.0
Q ss_pred ChHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhcC
Q 042770 1 DPIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQG 74 (75)
Q Consensus 1 ~~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~~ 74 (75)
++|++++++.+++++++++++++| .++|+|||++++|+..||++||++||..++.++.|++++++||.+++++
T Consensus 29 ~~l~~ila~~l~i~~~~I~~d~~l-~dLGlDSL~~veL~~~lE~~fgi~i~~~~l~~~~TV~~l~~~I~~~~~~ 101 (103)
T 2lte_A 29 DHLLTVLSVASGVPKEEISRDSRM-EDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKHRAA 101 (103)
Confidence 368889999999999999999999 6999999999999999999999999999999999999999999998765
No 26
>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1
Probab=99.81 E-value=1.8e-20 Score=100.01 Aligned_cols=72 Identities=17% Similarity=0.318 Sum_probs=67.3
Q ss_pred hHHHHHHhhhCCCCC-CCC--CCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhcC
Q 042770 2 PIISVIKNFQNVDPF-KVT--TNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQG 74 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~-~i~--~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~~ 74 (75)
++++++++.+++++. +++ ++++| .++|+||+++++++..+|++||+++|..++.++.|++++++|+.+++++
T Consensus 8 ~l~~~l~~~l~~~~~~~i~~~~~~~~-~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~~ 82 (83)
T 1or5_A 8 DLKKLLAETAGEDDSVDLAGELDTPF-VDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTPAT 82 (83)
T ss_dssp HHHHHHHHHSCCCSSCCGGGCSSSCH-HHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTCCSC
T ss_pred HHHHHHHHHhCCCcccccCCCCCCcH-HHhCCCHHHHHHHHHHHHHHHCCccCHHHHhccCCHHHHHHHHHHHhcC
Confidence 688999999999987 899 99998 5999999999999999999999999999999999999999999987754
No 27
>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A
Probab=99.80 E-value=1e-19 Score=95.35 Aligned_cols=72 Identities=38% Similarity=0.634 Sum_probs=67.2
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhc
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQ 73 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~ 73 (75)
++++++++.+++++++++++++|..++|+||+.+++++..+|++||+++|..++.++.|++++++++.++.+
T Consensus 5 ~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~~gi~i~~~~~~~~~tv~~l~~~i~~~~~ 76 (77)
T 2ehs_A 5 RVKEIIAEQLGVEKEKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKIQTVGDVINYLKEKVG 76 (77)
T ss_dssp HHHHHHHHHHCCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC-
T ss_pred HHHHHHHHHhCCChhhCCCccchhhccCCCHHHHHHHHHHHHHHhCCccCHHHHHHcCCHHHHHHHHHHHhc
Confidence 678999999999999999999994499999999999999999999999999999999999999999998764
No 28
>2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis}
Probab=99.80 E-value=8.7e-20 Score=103.09 Aligned_cols=68 Identities=24% Similarity=0.369 Sum_probs=60.9
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhcC
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQG 74 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~~ 74 (75)
+|++++++.++ |+++++|.+++|||||++++|+..||++||++||++++.++.|+++++++|.+++++
T Consensus 34 ~v~~il~e~l~-----I~~d~~l~~dLGlDSLd~veLi~~LEe~FgI~I~~e~l~~~~TV~dlv~~I~~~l~~ 101 (113)
T 2cgq_A 34 TIQRILRTDRG-----ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSVAVWFPE 101 (113)
T ss_dssp HHHHHHTCCSC-----CCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCBHHHHHHHHHTTC--
T ss_pred HHHHHHHHHhC-----CCCCCchhhhcCCCHHHHHHHHHHHHHHhCCCcCHHHHHhCCCHHHHHHHHHHHHhc
Confidence 56677777776 999999977999999999999999999999999999999999999999999987653
No 29
>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1
Probab=99.80 E-value=1.1e-19 Score=99.63 Aligned_cols=71 Identities=14% Similarity=0.313 Sum_probs=65.4
Q ss_pred hHHHHHHhhhCCCCC----CCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhc
Q 042770 2 PIISVIKNFQNVDPF----KVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQ 73 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~----~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~ 73 (75)
++++++++.++.+.. +++++++| .++|+|||++++++..||++||++||..++.++.|++++++||.++.+
T Consensus 8 ~l~~ii~~~l~~~~~~~~~~i~~d~~~-~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~~ 82 (95)
T 1nq4_A 8 DLLTLLRECAGEEESIDLGGDVEDVAF-DALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNASLT 82 (95)
T ss_dssp HHHHHHHHHHTCSSTTCSCSCCSSSCH-HHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccccccccccCCCCCCh-hhhCCCHHHHHHHHHHHHHHHCCccCHHHHHcCCCHHHHHHHHHHHHh
Confidence 688999999987644 79999999 599999999999999999999999999999999999999999988753
No 30
>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1
Probab=99.77 E-value=1.2e-18 Score=97.22 Aligned_cols=71 Identities=17% Similarity=0.316 Sum_probs=63.7
Q ss_pred hHHHHHHhhhC--CCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhh--hhccHHHHHHHHHhhhc
Q 042770 2 PIISVIKNFQN--VDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEAD--IINTINMAVNFTASHCQ 73 (75)
Q Consensus 2 ~v~~ii~~~~~--~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~--~~~tv~~l~~~i~~~~~ 73 (75)
+|++++++.++ +++.+++++++|. ++|+|||++++|+..||++||++||++++. ++.|++.++++|....+
T Consensus 26 ~i~~il~~~l~~~v~~~~i~~d~~l~-dlGlDSL~~veLv~~lE~~fgI~i~~~~l~~~~~~tv~~l~~~v~~~~~ 100 (105)
T 2jq4_A 26 TIREILAKFGQLPTPVDTIADEADLY-AAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKLILD 100 (105)
T ss_dssp HHHHHHHHTSCCSSCGGGCCTTSCGG-GGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCcccCCCCCCHh-hcCCCHHHHHHHHHHHHHHHCCCcCHHHhhhhhcCCHHHHHHHHHHHhc
Confidence 68899999875 4578999999997 999999999999999999999999999985 88999999999887654
No 31
>2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis}
Probab=99.76 E-value=2.1e-20 Score=98.73 Aligned_cols=71 Identities=44% Similarity=0.621 Sum_probs=67.1
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
++++++++.+++++++++++++|..++|+||+++++++..+|++||+++|..++.++.|++++++++.+++
T Consensus 8 ~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 78 (79)
T 2l3v_A 8 RVKKIVVEHLGVDADKVTEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDDAAETILTVGDAVKFIDKAS 78 (79)
T ss_dssp HHHHHHHHHTCCCSTTCCTTCCHHHHTCCCSSSSSSTTTTHHHHTTCCCCHHHHTTCSSSSTTHHHHHHTC
T ss_pred HHHHHHHHHhCCCHhhCCCCCccccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 68899999999999999999999559999999999999999999999999999999999999999998875
No 32
>1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1
Probab=99.74 E-value=5.3e-20 Score=100.30 Aligned_cols=72 Identities=22% Similarity=0.356 Sum_probs=32.4
Q ss_pred hHHHHHHhhhCC--------CCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCC---cchhhhhccHHHHHHHHHh
Q 042770 2 PIISVIKNFQNV--------DPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIP---DNEADIINTINMAVNFTAS 70 (75)
Q Consensus 2 ~v~~ii~~~~~~--------~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~---~~~~~~~~tv~~l~~~i~~ 70 (75)
+++++|++.++. ++++++++++| .++|+||+++++++..+|++||++|| ..++.++.|++++++||.+
T Consensus 8 ~i~~ii~~~~~~~~~~~~~~~~~~i~~d~~l-~dlg~DSl~~vel~~~lE~~fgi~i~~~~~~~~~~~~Tv~~l~~~i~~ 86 (92)
T 1fh1_A 8 EIISAINKLVKAENGERTSVALGEITTDTEL-TSLGIDSLGLADVLWDLEQLYGIKIEMNTADAWSNLNNIGDVVEAVRG 86 (92)
T ss_dssp HHHHHHHHHC-----------------------------CTTTTHHHHHHHC-----------------CTTTSTHHHHC
T ss_pred HHHHHHHHHHHhccccccCCCHhhCCCCCCH-hhcCCChHHHHHHHHHHHHHhCCccCCccHhHHhhcCCHHHHHHHHHH
Confidence 688899999874 44589999999 69999999999999999999999999 7788999999999999998
Q ss_pred hhcC
Q 042770 71 HCQG 74 (75)
Q Consensus 71 ~~~~ 74 (75)
++++
T Consensus 87 ~~~~ 90 (92)
T 1fh1_A 87 LLTK 90 (92)
T ss_dssp ----
T ss_pred Hhhc
Confidence 8764
No 33
>2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A
Probab=99.72 E-value=3.2e-17 Score=89.45 Aligned_cols=70 Identities=19% Similarity=0.301 Sum_probs=63.5
Q ss_pred ChHHHHHHhhhCCC-CCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 1 DPIISVIKNFQNVD-PFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 1 ~~v~~ii~~~~~~~-~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
+.+++.+++++|++ +++|+++.+|. ++|+|||+.++|...||+.||+.+|..++... |++++++++....
T Consensus 9 ~~v~~~va~iLg~~~~~~I~~~~~l~-dLG~DSL~aVELr~~Le~~fgi~lp~~~l~~~-Ti~~La~~v~~~~ 79 (91)
T 2cg5_B 9 RDLVEAVAHILGIRDLAAVNLDSSLA-DLGLDALMSVEVRQTLERELNLVLSVREVRQL-TLRKLQELSSKAD 79 (91)
T ss_dssp TTHHHHHHHHTTCCSCTTSCTTSBTT-TTTCCHHHHHHHHHHHHHHHCCCCCHHHHHTC-BHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHCCCchhhCCCCCCHH-HhCCcchHHHHHHHHHHHHHCCCCCHHHHHhC-CHHHHHHHHhccc
Confidence 36899999999996 59999999995 99999999999999999999999999999775 9999999987654
No 34
>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus}
Probab=99.71 E-value=2.1e-17 Score=88.82 Aligned_cols=72 Identities=17% Similarity=0.311 Sum_probs=67.0
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCc--chhhhhccHHHHHHHHHhhhcC
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPD--NEADIINTINMAVNFTASHCQG 74 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~--~~~~~~~tv~~l~~~i~~~~~~ 74 (75)
.+++++++.+++++++++++++|. ++|+|||.+++++..++++||+++|. ..+..+.|++++++++.+...+
T Consensus 15 ~l~~~~~~~l~~~~~~i~~~~~~~-~lG~DSL~~~~l~~~l~~~~g~~l~~~~~~l~~~~Tv~~la~~l~~~~~~ 88 (89)
T 2kr5_A 15 AVMRVVSEESGIALEELTDDSNFA-DMGIDSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRALKDFMLGSGDA 88 (89)
T ss_dssp HHHHHHHHHHCCCGGGCCTTCBHH-HHTCCHHHHHHHHHHHHHTTCCCCCSSCCTTTSCCBHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHCcCHHHCCCCCCHH-HcCccHHHHHHHHHHHHHHHCCCCCchHHHHHcCCCHHHHHHHHHHhCcC
Confidence 578899999999999999999995 99999999999999999999999999 9999999999999999886544
No 35
>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A
Probab=99.70 E-value=5.9e-17 Score=86.53 Aligned_cols=70 Identities=16% Similarity=0.114 Sum_probs=66.1
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
.+++++++.+++++..++++.+|. ++|+||+.++++...+++.||+++|...+.++.|++++++++.++.
T Consensus 18 ~l~~~~~~~l~~~~~~i~~~~~~~-~lG~DSl~~~~l~~~l~~~~~~~i~~~~~~~~~ti~~la~~l~~~~ 87 (88)
T 2afd_A 18 WLIDQFAQQLDVDPDDIDMEESFD-NYDLNSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRLGELY 87 (88)
T ss_dssp HHHHHHHHHHTSCGGGCCTTSCGG-GTTCCSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCcCHHHcCCCCCHH-HcCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHh
Confidence 477889999999989999999996 9999999999999999999999999999999999999999998765
No 36
>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A*
Probab=99.66 E-value=1.7e-16 Score=86.42 Aligned_cols=71 Identities=14% Similarity=0.198 Sum_probs=66.6
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhc
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQ 73 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~ 73 (75)
.+++++++.+++++++++++++|. ++|+||+.++++...+++.||+++|..++..+.|++++++++.++..
T Consensus 25 ~l~~~~~~~l~~~~~~i~~~~~~~-~lG~DSl~~~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~~~ 95 (99)
T 2liu_A 25 VLKQQLAEALYTEESEIAEDQKFV-DLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGYIAQILS 95 (99)
T ss_dssp HHHHHHHHHTTSCGGGCCSSSCHH-HHTCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCcCHHHcCCCCCHH-HhCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHhh
Confidence 477889999999999999999996 99999999999999999999999999999999999999999988753
No 37
>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A
Probab=99.65 E-value=1.5e-16 Score=86.27 Aligned_cols=70 Identities=19% Similarity=0.249 Sum_probs=65.3
Q ss_pred hHHHHHHhhhC-CCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQN-VDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~-~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
.+++++++.++ .+++.++++.+|. ++|+|||..+++...+++.||+++|...+.+..|++++++++.++.
T Consensus 24 ~l~~~~~~~l~~~~~~~i~~~~~f~-~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~l 94 (95)
T 2ju1_A 24 LVRTSTATVLGHDDPKAVRATTPFK-ELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAEL 94 (95)
T ss_dssp HHHHHHHHHTTCCCGGGCCSSSCHH-HHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCChhhCCCCCCHH-HcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHHHHHHHHc
Confidence 47788999999 7788999999996 9999999999999999999999999999999999999999998764
No 38
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=99.62 E-value=8.9e-16 Score=93.71 Aligned_cols=71 Identities=13% Similarity=0.282 Sum_probs=67.1
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhc
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQ 73 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~ 73 (75)
.|++++++.+++++++++++.+|. ++|+|||++++++..+++.||+++|...+..+.|++++++|+.++..
T Consensus 30 ~l~~~~a~~l~~~~~~i~~~~~f~-~lG~DSl~~~el~~~l~~~~g~~l~~~~~~~~~Ti~~la~~l~~~~~ 100 (212)
T 2l22_A 30 FLRQSLAAMLYCEPGQIRDGSRFL-ELGLDSVIAAQWIREINKHYQLKIPADGIYTYPVFKAFTQWVGTQLQ 100 (212)
T ss_dssp HHHHHHHHHTTCCTTSCCTTCBHH-HHTCCHHHHHHHHHHHHHHTTCCCCTTHHHHCCBHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHCcCHHHcCCCCCHH-HhCCcHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHhcc
Confidence 578899999999999999999996 99999999999999999999999999999999999999999987653
No 39
>4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus}
Probab=99.62 E-value=1.9e-15 Score=82.17 Aligned_cols=70 Identities=14% Similarity=0.114 Sum_probs=64.4
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhcC
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQG 74 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~~ 74 (75)
+|.+++++.+|+ ..+.++.+|+ ++|.|||.+++++..++++||+.+|..++....|++++++++.+...+
T Consensus 20 ~l~~i~~~vL~~--~~i~~~~~Ff-~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~l~~~~~~ 89 (93)
T 4i4d_A 20 DIAAIWAETLGR--DSVGPHEDFA-ALGGNSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDHVHATLTG 89 (93)
T ss_dssp HHHHHHHHHHTC--SCCCTTCCTT-TTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHhCC--CCCCCCCCHH-HcCCcHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHHHHHHccc
Confidence 578899999998 4699999998 999999999999999999999999999999999999999999987643
No 40
>1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A
Probab=99.58 E-value=7.3e-15 Score=79.67 Aligned_cols=67 Identities=15% Similarity=0.248 Sum_probs=62.2
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASH 71 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~ 71 (75)
++.+++++.++++ .++++++|+ ++|.|||.+++++..++++||+++|..++....|++++++++.+.
T Consensus 18 ~l~~i~~~vL~~~--~i~~~~~Ff-~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~la~~i~~~ 84 (91)
T 1dny_A 18 KLAEIWERVLGVS--GIGILDNFF-QIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVATR 84 (91)
T ss_dssp HHHHHHHHHHTCS--SCCSSCCTT-SSCCSSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHHHHC-
T ss_pred HHHHHHHHHhCCC--CCCCCCCHH-HcCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHh
Confidence 5788999999985 799999997 999999999999999999999999999999999999999999765
No 41
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=99.57 E-value=1.1e-14 Score=88.90 Aligned_cols=71 Identities=14% Similarity=0.255 Sum_probs=66.9
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhhc
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHCQ 73 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~~ 73 (75)
.+++++++.+++++++++++.+|. ++|+||+..++++..|+++||+++|...+.++.|++++++|+.++.+
T Consensus 134 ~l~~~~~~~l~~~~~~i~~~~~f~-~lG~DSl~a~el~~~l~~~~g~~l~~~~l~~~~Ti~~La~~l~~~~~ 204 (212)
T 2l22_A 134 YLKQSLGELLFLDPGQLRSGAQFL-DLGMDSVTGTQWMRGVSRHFSIQLAADAIYTWPTLKSLADEVDRRVQ 204 (212)
T ss_dssp HHHHHHHHHHSSCSSSCCSSCCGG-GGCSSSHHHHHHHHHHHHHTTCCCCGGGGGGCCSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCChhhCCCCCCHH-HhCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHhc
Confidence 478899999999999999999996 99999999999999999999999999999999999999999988764
No 42
>2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=3.7e-12 Score=71.43 Aligned_cols=69 Identities=17% Similarity=0.266 Sum_probs=62.3
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhC-CcCCcchhhhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFG-FEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~-i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
+|.++++++++ ....+.++++|+ ++|-+||.++.|+..|+++|| +++|..++....|+++++++|.++.
T Consensus 29 ~La~iW~~vL~-~~~~i~~~ddFF-~lGG~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl~~lA~~l~~~~ 98 (110)
T 2cq8_A 29 AVRSVWQRILP-KVLEVEDSTDFF-KSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRKL 98 (110)
T ss_dssp HHHHHHHHHCS-SCSCCCTTCBHH-HHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCCCCCCCHH-hcCChHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCHHHHHHHHHHHh
Confidence 47788889998 135699999998 999999999999999999999 9999999999999999999998765
No 43
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=99.26 E-value=2.1e-11 Score=77.75 Aligned_cols=68 Identities=12% Similarity=0.172 Sum_probs=62.3
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
++.+++++.+|++. +.++.+|. ++|.|||.+++++..++++||++++..++....|++++++++.+..
T Consensus 15 ~l~~~~~~~l~~~~--i~~~~~ff-~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~~~t~~~la~~~~~~~ 82 (329)
T 3tej_A 15 IIAAAFSSLLGCDV--QDADADFF-ALGGHXLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIIDAEE 82 (329)
T ss_dssp HHHHHHHHHHTC-C--CSTTCBTT-TTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHCCBHHHHHHHHHSCT
T ss_pred HHHHHHHHHhCCCC--CCCCCCHH-HcCCcHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHhhc
Confidence 57889999999864 89999997 9999999999999999999999999999999999999999998653
No 44
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=99.07 E-value=1.8e-10 Score=73.06 Aligned_cols=67 Identities=13% Similarity=0.095 Sum_probs=62.0
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASH 71 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~ 71 (75)
.+++.+++.+ ++++++.++.+|. ++|+||+.++.|+..+++. |++++..++....|++++++++.++
T Consensus 219 wlr~~va~~L-~~~~~i~~~~nL~-~lGlDSi~~m~l~~~~~~~-g~~~~~~~l~~~ptl~~~~~~l~~~ 285 (287)
T 2fq1_A 219 ALREVILPLL-DESDEPFDDDNLI-DYGLDSVRMMALAARWRKV-HGDIDFVMLAKNPTIDAWWKLLSRE 285 (287)
T ss_dssp HHHHHHGGGC-CCSSCCCTTSCSG-GGTCCTTHHHHHHHHHTTT-CTTCCHHHHHTSCSHHHHHHHHHCC
T ss_pred HHHHHHHHHh-CCHhhcCCCCCHH-HhCccHHHHHHHHHHHHHc-CCCCCHHHHHhCccHHHHHHHHHhh
Confidence 3677889999 8889999999997 9999999999999999998 9999999999999999999999843
No 45
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=99.03 E-value=7.8e-10 Score=73.72 Aligned_cols=67 Identities=21% Similarity=0.250 Sum_probs=62.2
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASH 71 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~ 71 (75)
++.+++++++|++ .+..+.+|. ++|.|||.++.++..+++.||+.++..++....|++++++++...
T Consensus 14 ~l~~iw~~vL~~~--~i~~~d~ff-~lGgdSl~a~~l~~~~~~~~g~~l~~~~i~~~~ti~~la~~~~~~ 80 (520)
T 2jgp_A 14 RLAQVWEQVLNVP--QVGALDDFF-ALGGHSLRAMRVLSSMHNEYQVDIPLRILFEKPTIQELAAFIEET 80 (520)
T ss_dssp HHHHHHHHHHTCS--CCCTTCBTT-TTTCCHHHHHHHHHHHHHHHCBCCCHHHHHHSCBHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCC--CCCCCccHH-HhcccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhh
Confidence 5788999999985 699999998 999999999999999999999999999999999999999999754
No 46
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.77 E-value=1e-08 Score=75.03 Aligned_cols=68 Identities=16% Similarity=0.194 Sum_probs=62.4
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
++.+++++.+|++ .+..+.+|+ ++|.|||.+++++..+++.||+++|..++....|++++++++....
T Consensus 976 ~l~~~~~~vL~~~--~i~~~~~ff-~lGg~Sl~a~~l~~~l~~~~g~~l~~~~~~~~~ti~~la~~~~~~~ 1043 (1304)
T 2vsq_A 976 TIAQIWSEVLGRK--QIGIHDDFF-ALGGHALKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYLKNGG 1043 (1304)
T ss_dssp HHHHHHHHHHTCS--CCCTTCCTT-TTTCCHHHHHHHHHHSSSTTSCCCCSSCTTTCCSHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCC--ccCCCCCHH-HhCCChHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHhcC
Confidence 4788999999974 689999998 9999999999999999999999999999999999999999997643
No 47
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=98.75 E-value=9e-10 Score=73.77 Aligned_cols=67 Identities=22% Similarity=0.343 Sum_probs=0.0
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
.|.+++++.++++ .+..+.+|+ ++|.|||.++.++..+++ ||+.+|..++....|++++++++.+..
T Consensus 49 ~l~~~w~~~l~~~--~i~~~~~ff-~lGg~Sl~a~~l~~~~~~-~~~~~~~~~~~~~~t~~~la~~~~~~~ 115 (508)
T 4f6l_B 49 TFVDVFGEVLKQN--DVGVDDDFF-ELGGNSLEAMLVVSHLKR-FGHHISMQTLYQYKTVRQIVNYMYQNQ 115 (508)
T ss_dssp -----------------------------------------------------------------------
T ss_pred HHHHHHHHHhCCC--CCCCCCChH-HcCchHHHHHHHHHHHHH-cCCCccHHHHhcCCcHHHHHHHHHhhc
Confidence 5678889999886 689999998 999999999999999986 999999999999999999999997653
No 48
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=98.73 E-value=2.3e-08 Score=68.25 Aligned_cols=68 Identities=13% Similarity=0.106 Sum_probs=58.2
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
.+.+++++.++. ...+..+++|+ ++|.|||.++.|+..+++ ++.+++..++....|++++++++.+..
T Consensus 549 ~l~~~~~~~l~~-~~~~~~~d~Ff-~lGgdSl~a~~l~~~l~~-~~~~~~~~~~~~~pti~~la~~l~~~~ 616 (617)
T 3rg2_A 549 ALREVILPLLDE-SDEPFDDDNLI-DYGLDSVRMMALAARWRK-VHGDIDFVMLAKNPTIDAWWKLLSREV 616 (617)
T ss_dssp HHHHHHGGGSCT-TCCCCTTSCGG-GGTCCHHHHHHHHHHHHT-TSTTCCHHHHHHSCCHHHHHHHHCC--
T ss_pred HHHHHHHHHhcc-CCCCCCCCChh-hcCccHHHHHHHHHHHHH-hcCCCCHHHHhcCCCHHHHHHHHHhhc
Confidence 466778888763 35688899998 999999999999999987 789999999999999999999998754
No 49
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=98.67 E-value=2.5e-09 Score=73.42 Aligned_cols=68 Identities=10% Similarity=0.074 Sum_probs=0.0
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHH-HhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKE-EFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~-~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
.+.+++++.++++ .+..+.+|+ ++|.|||.++.|+..+++ .||+.++..++....|++++++++.+..
T Consensus 528 ~l~~iw~~vL~~~--~~~~~d~Ff-~lGGdSl~a~~l~~~l~~~~~~~~l~~~~~f~~pti~~la~~l~~~~ 596 (620)
T 4dg8_A 528 GCAQLWSELLGCE--VGAADQDFF-LCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLLRSHG 596 (620)
T ss_dssp ------------------------------------------------------------------------
T ss_pred HHHHHHHHHhCCC--CCCCCCChh-hccCcHHHHHHHHHHHHhhCCCCCcCHHHHhcCCCHHHHHHHHHhcC
Confidence 4677888899874 578889998 999999999999999998 8999999999999999999999998653
No 50
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.32 E-value=6.7e-08 Score=74.64 Aligned_cols=68 Identities=16% Similarity=0.274 Sum_probs=0.0
Q ss_pred hHHHHHHhhhCCC-CCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhh
Q 042770 2 PIISVIKNFQNVD-PFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASH 71 (75)
Q Consensus 2 ~v~~ii~~~~~~~-~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~ 71 (75)
.+.+++++.++++ .++++++.+|. ++|+|||..++|...++++||+.+|..++.. .|+..+++++...
T Consensus 2127 ~l~~~~a~vL~~~~~~~i~~~~~~~-~lG~DSL~avelr~~i~~~~~~~l~~~~i~~-~t~~~la~~~~~~ 2195 (2512)
T 2vz8_A 2127 DLVKAVAHILGIRDVASINPDSTLV-DLGLDSLMGVEVRQILEREHDLVLSMREVRQ-LSLRKLQELSSKT 2195 (2512)
T ss_dssp -----------------------------------------------------------------------
T ss_pred HHHHHHHHHhCCCcccccCCCCchH-HhCcchHHHHHHHHHHHHHhCCcccHHHHHh-hhHHHHHHHHhhc
Confidence 4678889999987 57899999997 9999999999999999999999999999866 6888887776543
No 51
>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}
Probab=96.16 E-value=0.00062 Score=42.70 Aligned_cols=37 Identities=8% Similarity=-0.167 Sum_probs=8.7
Q ss_pred CcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHH
Q 042770 29 GLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAV 65 (75)
Q Consensus 29 glDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~ 65 (75)
|.|||.+++++.+++++||+++|..++....|+..++
T Consensus 1 GGdSL~a~~l~~rl~~~~g~~l~~~~lf~~pt~~~l~ 37 (316)
T 2px6_A 1 GSHNLACPTPKEDGLAQQQTQLNLRSLLVNPEGPTLM 37 (316)
T ss_dssp -------------------------CCCCCTTSCSEE
T ss_pred CCchHHHHHHHHHHHHHHhhccchhhhhcCCCcCeeE
Confidence 7899999999999999999999999998888876543
No 52
>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1
Probab=91.56 E-value=0.25 Score=22.47 Aligned_cols=21 Identities=29% Similarity=0.542 Sum_probs=18.1
Q ss_pred CcchhHHHHHHHHHHHHhCCc
Q 042770 29 GLDNLDFVEIVMALKEEFGFE 49 (75)
Q Consensus 29 glDSl~~v~l~~~le~~f~i~ 49 (75)
++.=+...+|+..+|++||++
T Consensus 12 ~lTvlE~~eLvk~leekfGVs 32 (40)
T 1dd4_C 12 KLTVSELAELVKKLEDKFGVT 32 (40)
T ss_dssp TSCHHHHHHHHHHHHHHTCCC
T ss_pred hCcHHHHHHHHHHHHHHHCCC
Confidence 555678899999999999996
No 53
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=90.38 E-value=0.051 Score=43.90 Aligned_cols=51 Identities=8% Similarity=0.096 Sum_probs=0.0
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCccccc-CcchhHHHHHHHHHHHHhCCcCCcc
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDL-GLDNLDFVEIVMALKEEFGFEIPDN 53 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dl-glDSl~~v~l~~~le~~f~i~i~~~ 53 (75)
.++.+++..++.++++|.++.++. +| |.+|...-+|+..|..+||...|+.
T Consensus 1798 ~~~~liA~~~k~~~~~i~~~~~i~-~L~gg~St~~nell~dl~~efg~~~p~~ 1849 (3089)
T 3zen_D 1798 ATVALIALSAKMRIDQIEALDSIE-SITDGASSRRNQLLVDLGSELNLGAIDG 1849 (3089)
T ss_dssp -----------------------------------------------------
T ss_pred HHHHHHHHHhCCChhHCCccccHH-HHhCCchHHHHHHHHHHHHHhCCCCCCc
Confidence 467788899999999999999996 66 9999999999999999999977654
No 54
>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C
Probab=88.21 E-value=0.49 Score=20.11 Aligned_cols=19 Identities=32% Similarity=0.599 Sum_probs=15.6
Q ss_pred CcchhHHHHHHHHHHHHhC
Q 042770 29 GLDNLDFVEIVMALKEEFG 47 (75)
Q Consensus 29 glDSl~~v~l~~~le~~f~ 47 (75)
++.=+.+.+|+..+|++||
T Consensus 12 ~lTvlEl~eLvk~lEe~fG 30 (30)
T 1zav_U 12 KLTVSELAELVKKLEDKFG 30 (30)
T ss_dssp HSBHHHHHHHHHHHHHHTC
T ss_pred hCcHHHHHHHHHHHHHHhC
Confidence 4555778899999999997
No 55
>3ufe_A Transcriptional antiterminator (BGLG family); extended helix bundle, arcimboldo; 1.50A {Bacillus subtilis} PDB: 3gwh_A
Probab=73.01 E-value=2.9 Score=21.90 Aligned_cols=21 Identities=14% Similarity=0.233 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHhCCcCCcchh
Q 042770 35 FVEIVMALKEEFGFEIPDNEA 55 (75)
Q Consensus 35 ~v~l~~~le~~f~i~i~~~~~ 55 (75)
+..+...+++.||+.+|++++
T Consensus 79 a~~i~~~ie~~~~i~i~~~Ei 99 (111)
T 3ufe_A 79 AWKLIKILQQTLKKPVHEAEA 99 (111)
T ss_dssp HHHHHHHHHHHHCSCCCTHHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
Confidence 456788889999999999885
No 56
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=63.09 E-value=8 Score=19.37 Aligned_cols=26 Identities=12% Similarity=0.441 Sum_probs=21.0
Q ss_pred cCcchhHHHHHHHHHHHHh-CCcCCcc
Q 042770 28 LGLDNLDFVEIVMALKEEF-GFEIPDN 53 (75)
Q Consensus 28 lglDSl~~v~l~~~le~~f-~i~i~~~ 53 (75)
-.++++..=.+...++++| |+++...
T Consensus 28 aDL~tvT~K~VR~~Le~~~pg~dLs~k 54 (70)
T 1q1v_A 28 ANLEEVTMKQICKKVYENYPTYDLTER 54 (70)
T ss_dssp SCGGGCCHHHHHHHHHHHCSSSCCSHH
T ss_pred CCHHHHhHHHHHHHHHHHccCCCChHH
Confidence 3466777788999999999 9998854
No 57
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=62.68 E-value=8.1 Score=19.43 Aligned_cols=25 Identities=20% Similarity=0.209 Sum_probs=19.0
Q ss_pred HHHHHhCCcCCcchhhhhccHHHHHHHH
Q 042770 41 ALKEEFGFEIPDNEADIINTINMAVNFT 68 (75)
Q Consensus 41 ~le~~f~i~i~~~~~~~~~tv~~l~~~i 68 (75)
.+++.||+++|.+ ++.|++.++-..
T Consensus 21 dl~~~l~~~l~~~---~~~Tl~G~i~~~ 45 (81)
T 3lae_A 21 DLNKMFNWELDTE---DARTFNGLILEH 45 (81)
T ss_dssp HHHHHHCCCCCCS---SCSBHHHHHHHH
T ss_pred HHHHHhCCCCCCC---CCccHHHHHHHH
Confidence 6788899999864 567888876543
No 58
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=62.56 E-value=13 Score=18.77 Aligned_cols=31 Identities=19% Similarity=0.474 Sum_probs=20.9
Q ss_pred HHHHHHhCCc-CCcchhhhhccHHHHHHHHHh
Q 042770 40 MALKEEFGFE-IPDNEADIINTINMAVNFTAS 70 (75)
Q Consensus 40 ~~le~~f~i~-i~~~~~~~~~tv~~l~~~i~~ 70 (75)
..+++.||++ +|..+-..+.|++.++-..-.
T Consensus 20 ~dl~~~l~~~~l~~~~~~~~~Tl~G~i~~~lg 51 (86)
T 2pls_A 20 PELKDTLGLRAVPEEEKGVYHTLSGMIMWLLG 51 (86)
T ss_dssp HHHHHHHTCSCCTTTTSCSCCBHHHHHHHHHT
T ss_pred HHHHHHhCCCcCCCccCCCcccHHHHHHHHhC
Confidence 3678889998 986321367899887654433
No 59
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=62.39 E-value=13 Score=18.66 Aligned_cols=28 Identities=25% Similarity=0.255 Sum_probs=20.2
Q ss_pred HHHHHHhCCcCCcchhhhhccHHHHHHHHHh
Q 042770 40 MALKEEFGFEIPDNEADIINTINMAVNFTAS 70 (75)
Q Consensus 40 ~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~ 70 (75)
..+++.||+++|.+ ++.|++.++-..-.
T Consensus 20 ~dl~~~l~~~l~~~---~~~Tl~G~i~~~lg 47 (83)
T 3llb_A 20 DAFNDFFGSEFSDE---EFDTVGGLVMSAFG 47 (83)
T ss_dssp HHHHHHHCCCCCTT---TCSBHHHHHHHHHS
T ss_pred HHHHHHhCCCCCCC---CCcCHHHHHHHHhC
Confidence 36788899999854 57799887654433
No 60
>3rio_A PTSGHI operon antiterminator; twisted beta sheet, four helix bundle, transcriptional antitermination, transcription; 1.99A {Bacillus subtilis}
Probab=61.87 E-value=6.7 Score=22.80 Aligned_cols=21 Identities=24% Similarity=0.479 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHhCCcCCcchh
Q 042770 35 FVEIVMALKEEFGFEIPDNEA 55 (75)
Q Consensus 35 ~v~l~~~le~~f~i~i~~~~~ 55 (75)
+..++..+++.|++.+|++++
T Consensus 147 a~~~~~~Ie~~~~i~lpedEi 167 (180)
T 3rio_A 147 AKEVIDMINEKAGLCLPEGEI 167 (180)
T ss_dssp HHHHHHHHHHHHTSCCCTTHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
Confidence 457888899999999999986
No 61
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=61.52 E-value=14 Score=18.74 Aligned_cols=26 Identities=15% Similarity=0.110 Sum_probs=19.3
Q ss_pred HHHHHHhCCcCCcchhhhhccHHHHHHHH
Q 042770 40 MALKEEFGFEIPDNEADIINTINMAVNFT 68 (75)
Q Consensus 40 ~~le~~f~i~i~~~~~~~~~tv~~l~~~i 68 (75)
..+++.||+++|.+ ++.|++.++-..
T Consensus 19 ~dl~~~l~~~l~~~---~~dTl~G~v~~~ 44 (87)
T 2rk5_A 19 NDFNEYFETDLESD---NVDTIAGFYLTG 44 (87)
T ss_dssp HHHHHHHTCCCCCT---TCCBHHHHHHHH
T ss_pred HHHHHHhCCCCCCC---CcccHHHHHHHH
Confidence 36788899999864 578988876543
No 62
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=60.82 E-value=10 Score=19.60 Aligned_cols=31 Identities=26% Similarity=0.289 Sum_probs=17.0
Q ss_pred HHHHHHhCCcCCcchhhhhccHHHHHHHHHh
Q 042770 40 MALKEEFGFEIPDNEADIINTINMAVNFTAS 70 (75)
Q Consensus 40 ~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~ 70 (75)
..+.+.||+++|..+-..+.|++.++-..-.
T Consensus 29 ~dl~~~l~~~l~~~~~~~~dTlgG~i~~~lg 59 (94)
T 2oai_A 29 EELREVLGAELPDGEENNYHTLAGMCISYFG 59 (94)
T ss_dssp HHHHHHHTC-------CCCSBHHHHHHHHHS
T ss_pred HHHHHHhCCCCCcccCCCCccHHHHHHHHhC
Confidence 4678889999986311357899887654433
No 63
>2jve_A PROD1; LY-6, three-finger snake toxin, UPAR, CD59, LIMB regeneration; NMR {Notophthalmus viridescens}
Probab=60.34 E-value=3.7 Score=20.90 Aligned_cols=25 Identities=12% Similarity=0.193 Sum_probs=21.2
Q ss_pred CcCCcchhhhhccHHHHHHHHHhhh
Q 042770 48 FEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 48 i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
+++|..++.+++|++..++.+++-.
T Consensus 48 vqlpyseiqecktvqqcaevleevt 72 (91)
T 2jve_A 48 VQLPYSEIQECKTVQQCAEVLEEVT 72 (91)
T ss_dssp EECSSSEEEEEECHHHHHHHHHHHH
T ss_pred EECCHHHHHHhHHHHHHHHHHHHHH
Confidence 5689999999999999998887643
No 64
>2bnk_A Early protein GP16.7; DNA-binding protein; 2.9A {Bacillus phage PHI29} SCOP: a.251.1.1 PDB: 2c5r_A 1zae_A
Probab=59.67 E-value=9.4 Score=18.69 Aligned_cols=30 Identities=13% Similarity=0.259 Sum_probs=23.5
Q ss_pred HHHhCCcCCcchh-----hhhccHHHHHHHHHhhh
Q 042770 43 KEEFGFEIPDNEA-----DIINTINMAVNFTASHC 72 (75)
Q Consensus 43 e~~f~i~i~~~~~-----~~~~tv~~l~~~i~~~~ 72 (75)
=++-||.||.+-+ .++.|-.++.+||+.+.
T Consensus 16 Ye~SnIrIP~DIIEdl~~~~L~te~EVmnYiEnqR 50 (67)
T 2bnk_A 16 YEQSNIRIPSDIIEDLVNQRLQSEQEVLNYIETQR 50 (67)
T ss_dssp HHHTTCCCCHHHHHHHHTTCCCCSHHHHHHHHHHH
T ss_pred HHHcCCcCcHHHHHHHHHHhhhhHHHHHHHHHhhH
Confidence 3456999998755 56778999999998764
No 65
>2zjq_5 50S ribosomal protein L7/L12; ribosome, ribosomal subunit, thiopeptide antibiotics, complex, translational regulation, molecular switch; 3.30A {Deinococcus radiodurans} SCOP: d.45.1.1
Probab=58.46 E-value=9.5 Score=21.34 Aligned_cols=22 Identities=23% Similarity=0.516 Sum_probs=18.7
Q ss_pred CcchhHHHHHHHHHHHHhCCcC
Q 042770 29 GLDNLDFVEIVMALKEEFGFEI 50 (75)
Q Consensus 29 glDSl~~v~l~~~le~~f~i~i 50 (75)
++.=+...+|+..+|++||++=
T Consensus 14 ~ltllE~~eLv~~lee~fgv~a 35 (122)
T 2zjq_5 14 QLTIMELADLIDGLKETWGVTA 35 (122)
T ss_pred cCCHHHHHHHHHHHHHHcCCCC
Confidence 5666788899999999999973
No 66
>2j01_L 50S ribosomal protein L7; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_L 3i8i_I
Probab=57.90 E-value=9.8 Score=21.36 Aligned_cols=22 Identities=27% Similarity=0.453 Sum_probs=18.7
Q ss_pred CcchhHHHHHHHHHHHHhCCcC
Q 042770 29 GLDNLDFVEIVMALKEEFGFEI 50 (75)
Q Consensus 29 glDSl~~v~l~~~le~~f~i~i 50 (75)
++.=+...+|+..+|++||++=
T Consensus 14 ~ltllE~~eLv~~lee~fgv~a 35 (125)
T 2j01_L 14 QATVLELKQLIDALKEAWGVTA 35 (125)
T ss_pred cCCHHHHHHHHHHHHHHcCCCc
Confidence 5666788899999999999973
No 67
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=57.47 E-value=18 Score=18.51 Aligned_cols=27 Identities=11% Similarity=0.058 Sum_probs=20.0
Q ss_pred HHHHHHhCCcCCcchhhhhccHHHHHHHHH
Q 042770 40 MALKEEFGFEIPDNEADIINTINMAVNFTA 69 (75)
Q Consensus 40 ~~le~~f~i~i~~~~~~~~~tv~~l~~~i~ 69 (75)
..+.+.||+.+|.+ .+.|++.++-...
T Consensus 27 ~dl~~~l~~~l~~~---~~~TlgG~i~~~l 53 (93)
T 2r2z_A 27 DEFNEVFETDLHMS---DVDTMAGYLITAL 53 (93)
T ss_dssp HHHHHHHTCCCCCT---TCCBHHHHHHHHH
T ss_pred HHHHHHhCCCCCCC---CcccHHHHHHHHh
Confidence 46788899999864 5789988765443
No 68
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=56.63 E-value=17 Score=19.32 Aligned_cols=27 Identities=22% Similarity=0.317 Sum_probs=19.9
Q ss_pred HHHHHHhCCcCCcchhhhhccHHHHHHHHH
Q 042770 40 MALKEEFGFEIPDNEADIINTINMAVNFTA 69 (75)
Q Consensus 40 ~~le~~f~i~i~~~~~~~~~tv~~l~~~i~ 69 (75)
..+++.||+++|.+ ++.|++.++-...
T Consensus 23 ~dl~~~lg~~l~~e---~~dTlgGli~~~l 49 (101)
T 2p3h_A 23 DEVERAIGYELPEG---DYETISGLLFDHA 49 (101)
T ss_dssp HHHHHHHTSCCCCS---SCCBHHHHHHHHH
T ss_pred HHHHHHhCCCCCCC---CCccHHHHHHHHh
Confidence 36788899999864 5789988765443
No 69
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=55.94 E-value=18 Score=18.48 Aligned_cols=27 Identities=22% Similarity=0.138 Sum_probs=19.9
Q ss_pred HHHHHHhCCcCCcchhhhhccHHHHHHHHH
Q 042770 40 MALKEEFGFEIPDNEADIINTINMAVNFTA 69 (75)
Q Consensus 40 ~~le~~f~i~i~~~~~~~~~tv~~l~~~i~ 69 (75)
..+.+.||+++|.+ .+.|++.++-..-
T Consensus 29 ~dl~~~l~~~l~~~---~~dTlgG~i~~~l 55 (91)
T 2pli_A 29 EDINTFFGTEYSSE---EADTIGGLVIQEL 55 (91)
T ss_dssp HHHHHHHCCCCCCS---SCCBHHHHHHHHH
T ss_pred HHHHHHhCCCCCCC---CCccHHHHHHHHh
Confidence 46788899999864 5789988765443
No 70
>2ftc_E L12MT, MRP-L12, 39S ribosomal protein L12, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus}
Probab=55.17 E-value=12 Score=21.33 Aligned_cols=21 Identities=19% Similarity=0.321 Sum_probs=18.0
Q ss_pred CcchhHHHHHHHHHHHHhCCc
Q 042770 29 GLDNLDFVEIVMALKEEFGFE 49 (75)
Q Consensus 29 glDSl~~v~l~~~le~~f~i~ 49 (75)
++.=+.+.+|+..|+++||++
T Consensus 12 ~LtllE~~eLv~~leekfgv~ 32 (137)
T 2ftc_E 12 SLTLLEISDLNELLKKTLKIQ 32 (137)
T ss_pred cCCHHHHHHHHHHHHHHhCCC
Confidence 455677889999999999997
No 71
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=54.46 E-value=22 Score=19.11 Aligned_cols=32 Identities=19% Similarity=0.348 Sum_probs=22.3
Q ss_pred HHHHHHHhCCc--CCcchhhhhccHHHHHHHHHh
Q 042770 39 VMALKEEFGFE--IPDNEADIINTINMAVNFTAS 70 (75)
Q Consensus 39 ~~~le~~f~i~--i~~~~~~~~~tv~~l~~~i~~ 70 (75)
+..+++.||+. +|...-..+.|++.++-....
T Consensus 45 l~dl~e~lg~~~~l~~~~~~~~dTlgGlil~~lg 78 (113)
T 3ded_A 45 LDRFREFFELEAPLPGEAGGNIHTLAGVMLYQLG 78 (113)
T ss_dssp HHHHHHHTTCCSCCTTGGGTCCCBHHHHHHHHHC
T ss_pred HHHHHHHhCCCccCCcccCCCCccHHHHHHHHhC
Confidence 34778889998 886333467899887655443
No 72
>2pag_A Hypothetical protein; nysgx, target 10412I, novel fold, structural genomics, PSI-2 structure initiative; 1.60A {Pseudomonas syringae PV} SCOP: d.369.1.1
Probab=53.41 E-value=7.7 Score=21.65 Aligned_cols=19 Identities=16% Similarity=0.200 Sum_probs=15.7
Q ss_pred HHHHHHHHHHhCCcCCcch
Q 042770 36 VEIVMALKEEFGFEIPDNE 54 (75)
Q Consensus 36 v~l~~~le~~f~i~i~~~~ 54 (75)
-+-+..+|+.+|+++|.+-
T Consensus 24 ~e~I~~~E~~Lgi~fP~dY 42 (135)
T 2pag_A 24 EDQLVEIEEQLFINIPFVF 42 (135)
T ss_dssp HHHHHHHHHHHTCCCCHHH
T ss_pred HHHHHHHHHHHCCCCCHHH
Confidence 3567799999999999864
No 73
>1dd3_A 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix-bundl helix- bundle, alpha-beta structure; 2.00A {Thermotoga maritima} SCOP: a.108.1.1 d.45.1.1 PDB: 1dd4_A* 1giy_I 1yl3_I
Probab=53.37 E-value=9.8 Score=21.46 Aligned_cols=21 Identities=29% Similarity=0.542 Sum_probs=18.0
Q ss_pred CcchhHHHHHHHHHHHHhCCc
Q 042770 29 GLDNLDFVEIVMALKEEFGFE 49 (75)
Q Consensus 29 glDSl~~v~l~~~le~~f~i~ 49 (75)
++.=+.+.+|+..||++||++
T Consensus 12 ~ltllE~~eLv~~lee~fgv~ 32 (128)
T 1dd3_A 12 KLTVSELAELVKKLEDKFGVT 32 (128)
T ss_dssp TSCHHHHHHHHHHHHHHHCHH
T ss_pred cCCHHHHHHHHHHHHHHhCCC
Confidence 555678889999999999996
No 74
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=50.24 E-value=24 Score=17.91 Aligned_cols=29 Identities=10% Similarity=0.098 Sum_probs=20.2
Q ss_pred HHHHHHhCCcCCcchhhhhccHHHHHHHHH
Q 042770 40 MALKEEFGFEIPDNEADIINTINMAVNFTA 69 (75)
Q Consensus 40 ~~le~~f~i~i~~~~~~~~~tv~~l~~~i~ 69 (75)
..+.+.||+++|.+ -..+.|++.++-..-
T Consensus 26 ~dl~~~l~~~l~~~-~~~~~TlgG~i~~~l 54 (90)
T 2p13_A 26 RKASNLLEHDLVDE-AERYSTLGGYLLWQF 54 (90)
T ss_dssp HHHHHHHTSCCCCT-TCCCCBHHHHHHHHH
T ss_pred HHHHHHHCCCCCCc-CCCCccHHHHHHHHh
Confidence 36788899999863 125789988765443
No 75
>3gaa_A Uncharacterized protein TA1441; the protein with unknown function from thermoplasma acidophi structural genomics,PSI, MCSG; 2.70A {Thermoplasma acidophilum}
Probab=50.05 E-value=25 Score=21.58 Aligned_cols=26 Identities=15% Similarity=0.277 Sum_probs=23.8
Q ss_pred cchhHHHHHHHHHHHHhCCcCCcchh
Q 042770 30 LDNLDFVEIVMALKEEFGFEIPDNEA 55 (75)
Q Consensus 30 lDSl~~v~l~~~le~~f~i~i~~~~~ 55 (75)
-|--.+..++..+++.+|+++|..++
T Consensus 194 pdP~AA~~lL~~l~~~~gl~i~~~~L 219 (252)
T 3gaa_A 194 PDPGAVLSIIEAINKAYNLKIKTDLL 219 (252)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCCTTH
T ss_pred CCHHHHHHHHHHHHHHhCCCCCHHHH
Confidence 67788999999999999999999988
No 76
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=47.81 E-value=26 Score=17.61 Aligned_cols=28 Identities=14% Similarity=0.211 Sum_probs=19.5
Q ss_pred HHHHHHhCCc-CCcchhhhhccHHHHHHHHH
Q 042770 40 MALKEEFGFE-IPDNEADIINTINMAVNFTA 69 (75)
Q Consensus 40 ~~le~~f~i~-i~~~~~~~~~tv~~l~~~i~ 69 (75)
..+++.||++ +|.++ .+.|++.++-...
T Consensus 20 ~dl~~~l~~~~l~~~~--~~~Tl~G~i~~~l 48 (86)
T 2p4p_A 20 EDVMRALNIHTFPRDE--NYETIGGFMMYML 48 (86)
T ss_dssp HHHHHHTTCCCSCCSC--SSCBHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCC--CCccHHHHHHHHh
Confidence 3678889996 88532 5788888765443
No 77
>2prv_A Uncharacterized protein YOBK; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.30A {Bacillus subtilis} SCOP: d.369.1.1
Probab=45.88 E-value=12 Score=20.97 Aligned_cols=18 Identities=17% Similarity=0.409 Sum_probs=14.8
Q ss_pred HHHHHHHHHhCCcCCcch
Q 042770 37 EIVMALKEEFGFEIPDNE 54 (75)
Q Consensus 37 ~l~~~le~~f~i~i~~~~ 54 (75)
+.+..+|+++|+++|.+-
T Consensus 27 e~I~~~E~~Lgi~lP~dY 44 (153)
T 2prv_A 27 ENIGRIEENLQCDLPNSY 44 (153)
T ss_dssp HHHHHHHHHHTSCCCHHH
T ss_pred HHHHHHHHHHCCCCCHHH
Confidence 556788999999999864
No 78
>3d5p_A Putative glucan synthesis regulator of SMI1/KNR4; STR genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Bacteroides fragilis nctc 9343}
Probab=45.53 E-value=12 Score=20.76 Aligned_cols=18 Identities=6% Similarity=0.158 Sum_probs=15.0
Q ss_pred HHHHHHHHHhCCcCCcch
Q 042770 37 EIVMALKEEFGFEIPDNE 54 (75)
Q Consensus 37 ~l~~~le~~f~i~i~~~~ 54 (75)
+-+..+|+++|+.+|.+-
T Consensus 18 ~~I~~~E~~lgi~lP~~Y 35 (144)
T 3d5p_A 18 ASIDDVEKLLNTTLPKQY 35 (144)
T ss_dssp HHHHHHHHHHTSCCCHHH
T ss_pred HHHHHHHHHhCCCCCHHH
Confidence 567789999999999863
No 79
>2icg_A LIN2918 protein; hypothetical protein, structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; 1.65A {Listeria innocua} SCOP: d.369.1.1
Probab=44.34 E-value=13 Score=20.90 Aligned_cols=19 Identities=21% Similarity=0.490 Sum_probs=15.4
Q ss_pred HHHHHHHHHHhCCcCCcch
Q 042770 36 VEIVMALKEEFGFEIPDNE 54 (75)
Q Consensus 36 v~l~~~le~~f~i~i~~~~ 54 (75)
-+.+..+|+++|+.+|.+-
T Consensus 29 ~~~I~~~E~~Lgi~lP~~Y 47 (160)
T 2icg_A 29 PELIKIYQDALGNEFPETY 47 (160)
T ss_dssp HHHHHHHHHHHTCCCCHHH
T ss_pred HHHHHHHHHHhCCCCCHHH
Confidence 4567788999999999863
No 80
>3id6_A NOP5, PRE mRNA splicing protein; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus}
Probab=44.15 E-value=25 Score=22.10 Aligned_cols=38 Identities=21% Similarity=0.428 Sum_probs=31.1
Q ss_pred CcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccH
Q 042770 23 HFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTI 61 (75)
Q Consensus 23 ~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv 61 (75)
+| .++|+|+=....+..+-+..-|.++++.++.++..+
T Consensus 199 ~l-~~i~l~~~~~~~I~~aA~~SmG~~ise~DL~~I~~~ 236 (268)
T 3id6_A 199 SL-KELGFNEQRINRILDAAKKSIGADISEDDLSAMRMI 236 (268)
T ss_dssp HH-GGGTCCHHHHHHHHHHHHSCCCCCCCHHHHHHHHHH
T ss_pred cH-hhcCCCHHHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 45 366888888888888889999999999998776655
No 81
>3nxh_A Transcriptional regulator YVHJ; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; 2.58A {Bacillus subtilis subsp}
Probab=42.98 E-value=18 Score=22.58 Aligned_cols=34 Identities=12% Similarity=-0.010 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHH
Q 042770 35 FVEIVMALKEEFGFEIPDNEADIINTINMAVNFT 68 (75)
Q Consensus 35 ~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i 68 (75)
.-.++..+|+.||++|+.--.-++..+.++++.+
T Consensus 73 ~~~~~~tVe~llgi~Id~Yv~vnf~gf~~ivDal 106 (269)
T 3nxh_A 73 KDETVETVENFLQIPIDKYVTVDFDGFKDVINEV 106 (269)
T ss_dssp HHHHHHHHHHHHTSCCCEEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCceEEEECHHHHHHHHHhc
Confidence 3456778899999999887777888888888876
No 82
>1jrm_A MTH0637, conserved hypothetical protein MTH637; alpha-beta protein, structural genomics, OCSP, NESG; NMR {Methanothermobacterthermautotrophicus} SCOP: d.206.1.1
Probab=42.40 E-value=8.9 Score=20.70 Aligned_cols=50 Identities=22% Similarity=0.244 Sum_probs=27.5
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCC
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIP 51 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~ 51 (75)
.+.+.+++.++-+..=+...++=...+-++.+..-++...++..++++||
T Consensus 55 ali~~LAk~l~s~V~i~~G~tsR~K~v~I~~~~~~~l~~~L~~~~~~~~~ 104 (104)
T 1jrm_A 55 EIIKEFSETFGRDVEIVSGQKSRQKTIRIQGMGRDLFLKLVSEKFGLEIP 104 (104)
T ss_dssp HHHHHHHHHHSSEEEECSCGGGSEEEEEEESCCHHHHHHHHHHTSCCCCC
T ss_pred HHHHHHHHHhCCCEEEEecCCCCceEEEEcCCCHHHHHHHHHHHhcccCC
Confidence 46677777777111112233333234455555556667777777777765
No 83
>1h99_A Transcription antiterminator LICT; transcriptional antiterminator, PTS regulatory domain; 1.55A {Bacillus subtilis} SCOP: a.142.1.1 a.142.1.1 PDB: 1tlv_A*
Probab=40.11 E-value=19 Score=20.72 Aligned_cols=21 Identities=29% Similarity=0.504 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHhCCcCCcchh
Q 042770 35 FVEIVMALKEEFGFEIPDNEA 55 (75)
Q Consensus 35 ~v~l~~~le~~f~i~i~~~~~ 55 (75)
+-+++..+++.||+++|.++.
T Consensus 80 a~~i~~~i~~~~~i~l~~~Ei 100 (224)
T 1h99_A 80 GKEALVMVKNKTGVSLPEDEA 100 (224)
T ss_dssp HHHHHHHHHHHHSCCCCHHHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
Confidence 456778899999999999875
No 84
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=37.78 E-value=1.5e+02 Score=24.04 Aligned_cols=49 Identities=20% Similarity=0.220 Sum_probs=42.8
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCccccc-CcchhHHHHHHHHHHHHhCCcCCc
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDL-GLDNLDFVEIVMALKEEFGFEIPD 52 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dl-glDSl~~v~l~~~le~~f~i~i~~ 52 (75)
-++.+++..+...+++|.+..++. +| |--|-.-=||+..|..+||. +|+
T Consensus 150 ~~~~l~a~~~k~~~~~i~~~~~i~-~l~~g~st~~ne~~gdl~~ef~~-~~~ 199 (1887)
T 2uv8_A 150 LLHVLVAHKLKKSLDSIPMSKTIK-DLVGGKXTVQNEILGDLGKEFGT-TPE 199 (1887)
T ss_dssp HHHHHHHHTTTSCTTTCCTTSCHH-HHHTTCHHHHHHHHHHHHHHHCC-CCS
T ss_pred HHHHHHHHHhcCChhhCCccccHH-HHhCChhhhhhHHHHHHHHHhcc-CCC
Confidence 367788888999999999999996 66 89999999999999999998 554
No 85
>1d0q_A DNA primase; zinc-binding motif, protein, transferase; HET: DNA; 1.71A {Geobacillus stearothermophilus} SCOP: g.41.3.2
Probab=37.52 E-value=20 Score=18.90 Aligned_cols=20 Identities=30% Similarity=0.429 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHhCCcCCcch
Q 042770 35 FVEIVMALKEEFGFEIPDNE 54 (75)
Q Consensus 35 ~v~l~~~le~~f~i~i~~~~ 54 (75)
+.+-+..|.+.+|+++|..+
T Consensus 82 f~eA~~~La~~~gi~~~~~~ 101 (103)
T 1d0q_A 82 FVEAAKRLAAKAGVDLSVYE 101 (103)
T ss_dssp HHHHHHHHHHHHTCCCGGGC
T ss_pred HHHHHHHHHHHhCCCCCccC
Confidence 44455566777888877654
No 86
>3pe5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.38A {Clostridium leptum}
Probab=35.97 E-value=34 Score=22.86 Aligned_cols=32 Identities=16% Similarity=0.235 Sum_probs=27.1
Q ss_pred HHHHHHHHHhCCcCCcchhhhhccHHHHHHHH
Q 042770 37 EIVMALKEEFGFEIPDNEADIINTINMAVNFT 68 (75)
Q Consensus 37 ~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i 68 (75)
..+..+|+.||++|+.--.-++..+.++++.|
T Consensus 175 l~v~TVe~llgI~ID~Yv~Vnf~gF~~iVDaL 206 (403)
T 3pe5_A 175 LAIETIERNFGIDIDRYAVVYFDTFPGIVDTL 206 (403)
T ss_dssp HHHHHHHHHHCBCCCEEEEEEGGGHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCEEEEECHHHHHHHHHhc
Confidence 35678899999999888778888998988876
No 87
>4de9_A Putative transcriptional regulator YWTF; possible role in WALL techoic acid synthesis, membrane prote; HET: VTP; 1.79A {Bacillus subtilis} PDB: 3mej_A*
Probab=35.43 E-value=21 Score=22.51 Aligned_cols=34 Identities=12% Similarity=0.002 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHH
Q 042770 35 FVEIVMALKEEFGFEIPDNEADIINTINMAVNFT 68 (75)
Q Consensus 35 ~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i 68 (75)
.-.++..+|+.||++|+.--.-++..+.++++.+
T Consensus 97 ~~~~~~tVe~llgi~Id~Yv~vn~~gf~~ivDal 130 (286)
T 4de9_A 97 VDLTVKTVEEMLDIPVDYVVESNFTAFEDVVNEL 130 (286)
T ss_dssp HHHHHHHHHHHHCSCCCEEEEEEHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCceEEEECHHHHHHHHHhc
Confidence 4456678899999999887777888888888765
No 88
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=33.96 E-value=23 Score=23.55 Aligned_cols=26 Identities=19% Similarity=0.519 Sum_probs=21.4
Q ss_pred ccCcchhHHHHHHHHHHHHhCCcCCc
Q 042770 27 DLGLDNLDFVEIVMALKEEFGFEIPD 52 (75)
Q Consensus 27 dlglDSl~~v~l~~~le~~f~i~i~~ 52 (75)
..|.||+.++.++..+...+|.++-.
T Consensus 26 SGG~DS~~Ll~ll~~~~~~~~~~v~a 51 (464)
T 3a2k_A 26 SGGPDSLALLHVFLSLRDEWKLQVIA 51 (464)
T ss_dssp CSSHHHHHHHHHHHHHHHTTTCBCEE
T ss_pred cCcHHHHHHHHHHHHHHHHcCCeEEE
Confidence 56999999999999988777776543
No 89
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=32.91 E-value=3.3 Score=25.54 Aligned_cols=33 Identities=18% Similarity=0.331 Sum_probs=24.2
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhC
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEEFG 47 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~f~ 47 (75)
.+.+++++.+|++. +.+|+ +| +.++.++++.|.
T Consensus 32 ~la~iw~~vL~~~~-----~d~Ff-~l-------~~l~~~~~~~f~ 64 (319)
T 2hfk_A 32 MFRALFRQAVEDDR-----YGEFL-DV-------LAEASAFRPQFA 64 (319)
T ss_dssp HHHHHHHHHHHTTC-----HHHHH-HH-------HHHHHTTSCEEC
T ss_pred HHHHHHHHHHcCCc-----hHHHH-HH-------HHHHHHHHHhcC
Confidence 57788899998865 66776 55 777777776654
No 90
>3qfi_A Transcriptional regulator; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.71A {Enterococcus faecalis}
Probab=32.87 E-value=24 Score=22.47 Aligned_cols=34 Identities=6% Similarity=0.005 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHH
Q 042770 35 FVEIVMALKEEFGFEIPDNEADIINTINMAVNFT 68 (75)
Q Consensus 35 ~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i 68 (75)
.-..+..+|+.||++|+.--.-++..+.++++.+
T Consensus 88 ~~~~~~tVe~llgi~Id~Yv~vnf~gf~~iVDal 121 (301)
T 3qfi_A 88 AEMAINTVQELLDIPIHHYVSINMKGLKDLIDAV 121 (301)
T ss_dssp HHHHHHHHHHHTTSCCCEEEEECHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCceEEEeCHHHHHHHHHhc
Confidence 3456778899999999887777888888888765
No 91
>3o3m_A Alpha subunit 2-hydroxyisocaproyl-COA dehydratase; atypical dehydratase, lyase; 1.82A {Clostridium difficile} PDB: 3o3n_A* 3o3o_A
Probab=32.68 E-value=51 Score=21.52 Aligned_cols=21 Identities=19% Similarity=0.164 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHhCCcCCcchh
Q 042770 35 FVEIVMALKEEFGFEIPDNEA 55 (75)
Q Consensus 35 ~v~l~~~le~~f~i~i~~~~~ 55 (75)
+-+++..||+.+|.+|+.+.+
T Consensus 160 l~~l~~~LE~~tG~ki~~e~L 180 (408)
T 3o3m_A 160 FEEAIKQLEIISGKKFDPKKF 180 (408)
T ss_dssp HHHHHHHHHHHHTCCCCHHHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
Confidence 457889999999999999887
No 92
>2k84_A P9; HOST-virus interaction, metal-binding, virion, zinc, zinc-finger; NMR {Synthetic}
Probab=32.28 E-value=11 Score=15.62 Aligned_cols=8 Identities=63% Similarity=0.833 Sum_probs=6.4
Q ss_pred cccCcchh
Q 042770 26 IDLGLDNL 33 (75)
Q Consensus 26 ~dlglDSl 33 (75)
+||.+|||
T Consensus 21 eDLNL~SL 28 (30)
T 2k84_A 21 EDLNLDSL 28 (30)
T ss_dssp GGGTTTSS
T ss_pred hccchhhc
Confidence 58888886
No 93
>3o3m_B Beta subunit 2-hydroxyacyl-COA dehydratase; atypical dehydratase, lyase; 1.82A {Clostridium difficile} PDB: 3o3n_B* 3o3o_B
Probab=32.26 E-value=53 Score=21.27 Aligned_cols=21 Identities=24% Similarity=0.464 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHhCCcCCcchh
Q 042770 35 FVEIVMALKEEFGFEIPDNEA 55 (75)
Q Consensus 35 ~v~l~~~le~~f~i~i~~~~~ 55 (75)
+-+++..||+.+|.+++.+.+
T Consensus 140 l~~l~~~LE~~tG~~i~~e~L 160 (385)
T 3o3m_B 140 YKGVKRELEEICGYEIEEAKI 160 (385)
T ss_dssp HHHHHHHHHHHHSSCCCHHHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
Confidence 467888999999999999887
No 94
>3okz_A Putative uncharacterized protein GBS0355; structural genomics, PSI-biology; 2.70A {Streptococcus agalactiae}
Probab=31.54 E-value=26 Score=22.36 Aligned_cols=33 Identities=9% Similarity=0.006 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhCCcCCcchhhhhccHHHHHHHH
Q 042770 36 VEIVMALKEEFGFEIPDNEADIINTINMAVNFT 68 (75)
Q Consensus 36 v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i 68 (75)
-..+..+|+.||++|+.--.-++..+.++++.+
T Consensus 95 ~~~~~tVe~llgi~Id~Yv~vnf~gf~~iVDal 127 (306)
T 3okz_A 95 EMALMTVQDLLDINVDYFMQINMQGLVDLVNAV 127 (306)
T ss_dssp HHHHHHHHHHHTSCCCEEEEEEHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCeEEEEcHHHHHHHHHhc
Confidence 345678999999999888778888888888875
No 95
>2o3g_A Putative protein; APC85631.1, neisseria meningitid structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=31.44 E-value=36 Score=17.30 Aligned_cols=28 Identities=7% Similarity=0.088 Sum_probs=19.1
Q ss_pred HHHHHHhCCc-CCcchhhhhccHHHHHHHHH
Q 042770 40 MALKEEFGFE-IPDNEADIINTINMAVNFTA 69 (75)
Q Consensus 40 ~~le~~f~i~-i~~~~~~~~~tv~~l~~~i~ 69 (75)
..+.+.||+. +|.+ ..+.|++.++-..-
T Consensus 28 ~dl~~~l~~~~l~~~--~~~~Tl~G~i~~~l 56 (92)
T 2o3g_A 28 VELAPQLNLPQQEED--ADFHTVAGLIMEEL 56 (92)
T ss_dssp HHHTTTTTCCCCCTT--CSCSBHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcC--CCcccHHHHHHHHh
Confidence 3677889998 8832 25778888765443
No 96
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=30.54 E-value=88 Score=18.59 Aligned_cols=44 Identities=7% Similarity=0.143 Sum_probs=32.2
Q ss_pred Ccch-hHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 29 GLDN-LDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 29 glDS-l~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
|=+| +..++=...+=++||++....-..-.+|...+.+|+.+..
T Consensus 30 GS~SD~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~ 74 (181)
T 4b4k_A 30 GSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETAR 74 (181)
T ss_dssp SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTT
T ss_pred CCHhHHHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHH
Confidence 4444 4455555666678999877777789999999999987643
No 97
>1w4t_A Arylamine N-acetyltransferase; 5- aminosalicylic acid, NAT, xenobiotic metabolism, acyltransferase; 1.95A {Pseudomonas aeruginosa} SCOP: d.3.1.5
Probab=30.38 E-value=44 Score=21.11 Aligned_cols=20 Identities=15% Similarity=0.301 Sum_probs=16.4
Q ss_pred HHHHHHHHHHhCCcCCcchh
Q 042770 36 VEIVMALKEEFGFEIPDNEA 55 (75)
Q Consensus 36 v~l~~~le~~f~i~i~~~~~ 55 (75)
-++...|++.|||.++..+.
T Consensus 266 ~e~~~~L~~~FgI~l~~~~~ 285 (299)
T 1w4t_A 266 EELLDILQTRFRLRLDPASE 285 (299)
T ss_dssp HHHHHHHHTTTCCCCCTTTT
T ss_pred HHHHHHHHHHcCCcCChhhh
Confidence 47788899999999987654
No 98
>3b1l_X E3 ubiquitin-protein ligase parkin; proteasome, ALFA-beta-protein; 1.85A {Mus musculus} PDB: 1mg8_A 2zeq_A 2knb_A 1iyf_A
Probab=35.86 E-value=11 Score=18.10 Aligned_cols=14 Identities=21% Similarity=0.164 Sum_probs=6.8
Q ss_pred HHHHHHhhhCCCCC
Q 042770 3 IISVIKNFQNVDPF 16 (75)
Q Consensus 3 v~~ii~~~~~~~~~ 16 (75)
+++.|++..|++++
T Consensus 26 lK~~i~~~~gi~~~ 39 (76)
T 3b1l_X 26 LKEVVAKQQGVPAD 39 (76)
Confidence 34445555555443
No 99
>3sgf_J 50S ribosomal protein L7/L12; typeii release factor binding with ribosome, ribosome-antibi complex; 3.20A {Escherichia coli} PDB: 2xtg_L 2xux_L 3uos_J 1rqu_A 1rqv_A 2gya_3 2gyc_3 1rqt_A
Probab=29.48 E-value=4.9 Score=22.48 Aligned_cols=21 Identities=33% Similarity=0.727 Sum_probs=14.8
Q ss_pred CcchhHHHHHHHHHHHHhCCc
Q 042770 29 GLDNLDFVEIVMALKEEFGFE 49 (75)
Q Consensus 29 glDSl~~v~l~~~le~~f~i~ 49 (75)
++.=+...+|+..+|++||++
T Consensus 14 ~ltllE~~eLv~~lee~fgVs 34 (121)
T 3sgf_J 14 AMSVMDVVELISAMEEKFGVS 34 (121)
T ss_dssp GCHHHHHHHHHTTTCSCC---
T ss_pred cCCHHHHHHHHHHHHHHcCCC
Confidence 555677888999999999996
No 100
>1h3o_B Transcription initiation factor TFIID 20/15 kDa subunits; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=29.40 E-value=32 Score=17.47 Aligned_cols=22 Identities=14% Similarity=0.332 Sum_probs=13.8
Q ss_pred CcchhHHHHHHHHHHHHhCCcC
Q 042770 29 GLDNLDFVEIVMALKEEFGFEI 50 (75)
Q Consensus 29 glDSl~~v~l~~~le~~f~i~i 50 (75)
+-+.+..-++...+|+.|++.|
T Consensus 55 ~s~~le~kDvql~Ler~wni~i 76 (76)
T 1h3o_B 55 KSSTLEVKDVQLHLERQWNMWI 76 (76)
T ss_dssp TCCEECHHHHHHHHHHHTCCCC
T ss_pred CCCCccHHHHHHHHHhhcCCcC
Confidence 4455566666777777777653
No 101
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=29.02 E-value=46 Score=20.68 Aligned_cols=24 Identities=13% Similarity=0.437 Sum_probs=21.2
Q ss_pred cchhHHHHHHHHHHHHhCCcCCcc
Q 042770 30 LDNLDFVEIVMALKEEFGFEIPDN 53 (75)
Q Consensus 30 lDSl~~v~l~~~le~~f~i~i~~~ 53 (75)
-||+..++++-++.+..|+.+|.+
T Consensus 309 ~~~l~~~~i~~~i~~~~g~~~p~d 332 (334)
T 3ohs_X 309 VESELLADILEEVRRAIGVTFPQD 332 (334)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTC
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCC
Confidence 479999999999999999999875
No 102
>3pyf_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; transferase; HET: ANP; 1.70A {Mycobacterium tuberculosis} PDB: 3pyd_A* 3pye_A* 3pyg_A* 4ed4_A* 4dxl_A* 4emd_A*
Probab=26.85 E-value=96 Score=19.29 Aligned_cols=54 Identities=7% Similarity=0.172 Sum_probs=37.3
Q ss_pred HHHHHhhhCCCCC---CCCCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhh
Q 042770 4 ISVIKNFQNVDPF---KVTTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADI 57 (75)
Q Consensus 4 ~~ii~~~~~~~~~---~i~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~ 57 (75)
.+.+.+.++.++. .+.-+-+...-||--|-..+-.+..+.+.||..++.+++..
T Consensus 76 ~~~l~~~~g~~~~~~i~i~~~iP~~~GLGsssa~a~a~l~al~~~~~~~l~~~~l~~ 132 (306)
T 3pyf_A 76 AELMAEHVGRAPDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRM 132 (306)
T ss_dssp HHHHHHHTTCCCCEEEEEEECSCTTSSSCHHHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHhCCCCCeEEEEecCCCCCCCcchHHHHHHHHHHHHHHHhCCCcCHHHHHH
Confidence 3445555665431 23445556567777888899999999999999998877643
No 103
>3po0_A Small archaeal modifier protein 1; ubiquitin-like protein, protein binding; 1.55A {Haloferax volcanii} PDB: 2l83_A
Probab=26.64 E-value=64 Score=15.99 Aligned_cols=31 Identities=19% Similarity=0.071 Sum_probs=15.2
Q ss_pred HHHHHhCCcCCcchhhhhccHHHHHHHHHhh
Q 042770 41 ALKEEFGFEIPDNEADIINTINMAVNFTASH 71 (75)
Q Consensus 41 ~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~ 71 (75)
.+.+.+|..--.-++..-.|++++.+.+..+
T Consensus 10 ~lre~~g~~~~~~~~~~~~Tv~~ll~~L~~~ 40 (89)
T 3po0_A 10 DLAEVAGSRTVRVDVDGDATVGDALDALVGA 40 (89)
T ss_dssp HHHHHHTCSEEEEECCTTCBHHHHHHHHHHH
T ss_pred HHHHHhCCCeEEEECCCCCcHHHHHHHHHHH
Confidence 4555555321111223345777777766543
No 104
>2blf_B SORB, sulfite\:cytochrome C oxidoreductase subunit B; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_B* 2c9x_B* 2ca3_B* 2ca4_B*
Probab=24.44 E-value=73 Score=15.65 Aligned_cols=28 Identities=7% Similarity=0.175 Sum_probs=19.3
Q ss_pred HHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhh
Q 042770 38 IVMALKEEFGFEIPDNEADIINTINMAVNFTASH 71 (75)
Q Consensus 38 l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~ 71 (75)
.+....+.||..+++++ +..+++|+.+.
T Consensus 53 ~v~~M~~~~g~~ls~~e------~~~I~~YL~~~ 80 (81)
T 2blf_B 53 EVQKMIKVYHAPVDEAD------AKAIADYLAKT 80 (81)
T ss_dssp HHHHHHHTSCCCCCHHH------HHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCHHH------HHHHHHHHHHh
Confidence 44566667888887776 45778887653
No 105
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=24.30 E-value=28 Score=18.88 Aligned_cols=18 Identities=11% Similarity=0.135 Sum_probs=13.5
Q ss_pred hHHHHHHhhhCCCCCCCC
Q 042770 2 PIISVIKNFQNVDPFKVT 19 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~ 19 (75)
.+++.+++.++++.+.++
T Consensus 54 ali~~LAk~l~V~ks~V~ 71 (108)
T 1n91_A 54 HLVKFLGKQFRVAKSQVV 71 (108)
T ss_dssp HHHHHHHHHTCCCTTTEE
T ss_pred HHHHHHHHHhCCccceEE
Confidence 467888888888777653
No 106
>2v8p_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; nucleotide-binding, isoprene biosynthesis, transferase, ATP-binding, non-mevalonate; HET: CDP ADP; 2.1A {Aquifex aeolicus} PDB: 2v2v_A* 2v2q_A* 2v34_A* 2v2z_A* 2vf3_A*
Probab=24.08 E-value=1.2e+02 Score=18.16 Aligned_cols=52 Identities=12% Similarity=0.222 Sum_probs=34.3
Q ss_pred HHHHhhhCCCC-CCC--CCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhh
Q 042770 5 SVIKNFQNVDP-FKV--TTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEAD 56 (75)
Q Consensus 5 ~ii~~~~~~~~-~~i--~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~ 56 (75)
+.+.+.++.++ -+| .-+-+...-||=-|-..+-++..+.+.||..++.+++.
T Consensus 70 ~~~~~~~g~~~g~~i~i~~~IP~g~GLGsSsa~a~a~l~al~~l~~~~l~~~el~ 124 (271)
T 2v8p_A 70 REFERITGIEINYSIFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELR 124 (271)
T ss_dssp HHHHHHHCCCCCEEEEEECCSCTTSSSCHHHHHHHHHHHHHHHHTTCCSCHHHHH
T ss_pred HHHHHHhCCCCCeEEEEEeCCCCCCCCchHHHHHHHHHHHHHHhcCCCcCHHHHH
Confidence 34444555532 223 34445555667677888888899999999998877654
No 107
>2xxp_A CPS2A; replication, peptidoglycan, LCP, LYTR; HET: DSL PEG; 1.69A {Streptococcus pneumoniae} PDB: 3tep_A* 3tfl_A* 2xxq_A* 3tel_A* 4de8_A*
Probab=23.27 E-value=43 Score=22.03 Aligned_cols=33 Identities=9% Similarity=0.105 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhCCcCCcchhhhhccHHHHHHHH
Q 042770 36 VEIVMALKEEFGFEIPDNEADIINTINMAVNFT 68 (75)
Q Consensus 36 v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i 68 (75)
-..+..+|+.||++|+.--.-+|..+.++++.+
T Consensus 197 ~~~~~tVe~l~gi~Id~Yv~vnf~gf~~lvDal 229 (398)
T 2xxp_A 197 DSSIHTLENLYGVDINYYVRLNFTSFLKMIDLL 229 (398)
T ss_dssp HHHHHHHHHHHTCCCCEEEEEEHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCceEEEEcHHHHHHHHHhc
Confidence 345788999999998887777888888888765
No 108
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=23.03 E-value=55 Score=20.82 Aligned_cols=26 Identities=12% Similarity=0.078 Sum_probs=17.9
Q ss_pred ccCcchhHHHHHHHHHHHHhCCcCCc
Q 042770 27 DLGLDNLDFVEIVMALKEEFGFEIPD 52 (75)
Q Consensus 27 dlglDSl~~v~l~~~le~~f~i~i~~ 52 (75)
..|.||+.++.++..+-...+.+++.
T Consensus 54 SGGkDS~vLL~Ll~~~~~~~~~~i~v 79 (325)
T 1zun_A 54 SIGKDSAVMLHLARKAFFPGKLPFPV 79 (325)
T ss_dssp CSSHHHHHHHHHHHHHHTTSCCSSCE
T ss_pred cChHHHHHHHHHHHHhccccCCCEEE
Confidence 67899999998887774433444443
No 109
>3pvv_A Chromosomal replication initiator protein DNAA; helix-turn-helix motif, interacting with DNAA-BOX, DNAA-box; HET: DNA; 2.00A {Mycobacterium tuberculosis} PDB: 3pvp_A*
Probab=22.83 E-value=11 Score=20.06 Aligned_cols=66 Identities=15% Similarity=0.102 Sum_probs=40.8
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHH-hCCcCCcc--hh-hhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMALKEE-FGFEIPDN--EA-DIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~le~~-f~i~i~~~--~~-~~~~tv~~l~~~i~~~~ 72 (75)
.|.+.+++++|++++++.....-. . =..+=.+.+.|-.+ .+.++|.- .| .+..||-.-++-|++.+
T Consensus 9 ~I~~~Va~~f~v~~~dl~s~~R~~-~----i~~aRqiAmYL~r~~t~~Sl~~IG~~fgRDHsTV~ha~~ki~~~~ 78 (101)
T 3pvv_A 9 TIMAATAEYFDTTVEELRGPGKTR-A----LAQSRQIAMYLCRELTDLSLPKIGQAFGRDHTTVMYAQRKILSEM 78 (101)
T ss_dssp HHHHHHHHHTTCCHHHHHSSCCCH-H----HHHHHHHHHHHHHHHCCCCHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHhCCCCCc-h----hhHHHHHHHHHHHHHhCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 578899999999988876665543 1 23344566666544 56666652 23 45556666666665543
No 110
>2kxo_A Cell division topological specificity factor; MINE, MIND-binding, to specificity, cell cycle; NMR {Neisseria gonorrhoeae}
Probab=22.63 E-value=31 Score=18.25 Aligned_cols=18 Identities=17% Similarity=0.392 Sum_probs=13.9
Q ss_pred hHHHHHHhhhCCCCCCCC
Q 042770 2 PIISVIKNFQNVDPFKVT 19 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~ 19 (75)
.|+++|+++..++++.++
T Consensus 46 eIl~VIsKYv~Id~~~v~ 63 (95)
T 2kxo_A 46 ALMEVLSKYVNVSLDNIR 63 (95)
T ss_dssp HHHHHHHHHSCCCTTSEE
T ss_pred HHHHHHHHheecchhheE
Confidence 578889999998876543
No 111
>3qoe_A Heterocyst differentiation protein; MCSG, PSI biology, structural genomics, midwest center for S genomics, helix-turn-helix; 3.00A {Fischerella thermalis} PDB: 3qod_A
Probab=22.20 E-value=1.2e+02 Score=18.94 Aligned_cols=48 Identities=8% Similarity=0.160 Sum_probs=34.4
Q ss_pred CcccccCcchhHHHHHHHHHHHHhCCcCCcchhhhhccHHHHHHHHHhhh
Q 042770 23 HFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADIINTINMAVNFTASHC 72 (75)
Q Consensus 23 ~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 72 (75)
++-+.-.+.|+.+++|+..|..+-.-++|.+. .+.--..++++|.+++
T Consensus 146 ~lPdAqli~sfqF~eLiefLh~rsQed~~~~r--rmpLSeAlaEHIkRRL 193 (302)
T 3qoe_A 146 NLPDAHLITSFEFLELIEFLHKRSQEDLPKEH--QMPLSEALAEHIKRRL 193 (302)
T ss_dssp CCCSCCCEESHHHHHHHHHHHHHHHHSSCTTT--CCCCCHHHHHHHHHTT
T ss_pred CCchHhhhhHHHHHHHHHHHHHhhhhcCChhc--cCchHHHHHHHHHHHH
Confidence 33345678899999999999988777777764 3333356788887764
No 112
>3mnf_A PAC2 family protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.97A {Streptomyces avermitilis}
Probab=21.83 E-value=1e+02 Score=18.86 Aligned_cols=26 Identities=15% Similarity=0.195 Sum_probs=23.0
Q ss_pred cchhHHHHHHHHHHHHhCCcCCcchh
Q 042770 30 LDNLDFVEIVMALKEEFGFEIPDNEA 55 (75)
Q Consensus 30 lDSl~~v~l~~~le~~f~i~i~~~~~ 55 (75)
-|--....++..+++.+|+++|..++
T Consensus 190 pdP~AA~~lL~~l~~~~gl~v~~~~L 215 (250)
T 3mnf_A 190 PNPKATLALLNRLEDLIDVRIPLGEL 215 (250)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCCCTTH
T ss_pred CCHHHHHHHHHHHHHHhCCCCCHHHH
Confidence 37778899999999999999999876
No 113
>1j1v_A Chromosomal replication initiator protein DNAA, 5'-D(*CP*CP*TP*GP*TP*GP*GP*AP*TP*AP*AP*CP*A)-3'; protein-DNA complex; 2.10A {Escherichia coli} SCOP: a.4.12.2
Probab=21.64 E-value=12 Score=19.54 Aligned_cols=66 Identities=14% Similarity=0.088 Sum_probs=40.4
Q ss_pred hHHHHHHhhhCCCCCCCCCCCCcccccCcchhHHHHHHHHH-HHHhCCcCCcc--hh--hhhccHHHHHHHHHhhh
Q 042770 2 PIISVIKNFQNVDPFKVTTNGHFQIDLGLDNLDFVEIVMAL-KEEFGFEIPDN--EA--DIINTINMAVNFTASHC 72 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i~~~~~l~~dlglDSl~~v~l~~~l-e~~f~i~i~~~--~~--~~~~tv~~l~~~i~~~~ 72 (75)
.|.+.+++++|++++++.....-. . =..+=.+.+.| .+.+|.++|.- .| .+.+||-..++-+++.+
T Consensus 5 ~I~~~Va~~f~i~~~dl~s~~R~~-~----i~~aRqiamyL~r~~t~~Sl~~IG~~fggrdHsTV~ha~~ki~~~~ 75 (94)
T 1j1v_A 5 NIQKTVAEYYKIKVADLLSKRRSR-S----VARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLR 75 (94)
T ss_dssp HHHHHHHHHTTCCHHHHHSCCCCH-H----HHHHHHHHHHHHHHHSCCCHHHHHHHTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHhCCCCCc-h----hHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 578889999999988776555443 1 22333455555 44567776652 23 35567766666666554
No 114
>1h72_C HK, homoserine kinase; transferase, threonine biosynthesis; HET: ANP; 1.8A {Methanococcus jannaschii} SCOP: d.14.1.5 d.58.26.1 PDB: 1fwl_A 1fwk_A* 1h73_A* 1h74_A*
Probab=21.58 E-value=1.4e+02 Score=17.92 Aligned_cols=52 Identities=13% Similarity=0.078 Sum_probs=33.2
Q ss_pred HHHhhhCCCC-CCC--CCCCCcccccCcchhHHHHHHHHHHHHhCCcCCcchhhh
Q 042770 6 VIKNFQNVDP-FKV--TTNGHFQIDLGLDNLDFVEIVMALKEEFGFEIPDNEADI 57 (75)
Q Consensus 6 ii~~~~~~~~-~~i--~~~~~l~~dlglDSl~~v~l~~~le~~f~i~i~~~~~~~ 57 (75)
.+.+.++.++ -+| .-+-+...-||=-|-..+-++..+.+.||..++..++..
T Consensus 66 ~~~~~~g~~~g~~i~i~~~iP~g~GLGSSsa~~~a~~~al~~l~~~~l~~~~l~~ 120 (296)
T 1h72_C 66 KMIDDFNIGKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVD 120 (296)
T ss_dssp HHHHHTTCCCEEEEEEECSSCTTSSSCHHHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHhCCCCCeEEEEEcCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 3444455542 123 334444445666777788888999999999988776543
No 115
>1dtc_A Acetyl-delta-toxin; NMR {Staphylococcus aureus} SCOP: j.7.1.1 PDB: 2dtb_A 2kam_A*
Probab=21.53 E-value=46 Score=13.23 Aligned_cols=14 Identities=29% Similarity=0.339 Sum_probs=9.5
Q ss_pred hccHHHHHHHHHhh
Q 042770 58 INTINMAVNFTASH 71 (75)
Q Consensus 58 ~~tv~~l~~~i~~~ 71 (75)
..|+++++.++.+-
T Consensus 6 isTIgdfvKlI~~T 19 (26)
T 1dtc_A 6 ISTIGDLVKWIIDT 19 (26)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45777877777653
No 116
>3d9w_A Putative acetyltransferase; arylamine N-acetyltransferase, NAT, X-RAY diffraction, acyltransferase; 2.70A {Nocardia farcinica}
Probab=20.64 E-value=38 Score=21.28 Aligned_cols=23 Identities=26% Similarity=0.388 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHhCCcCCcchhhh
Q 042770 35 FVEIVMALKEEFGFEIPDNEADI 57 (75)
Q Consensus 35 ~v~l~~~le~~f~i~i~~~~~~~ 57 (75)
.-++...|++.|||.+++.+...
T Consensus 256 ~~e~~~~L~~~FgI~l~~~e~~~ 278 (293)
T 3d9w_A 256 PGELPEVINELFDIELPGPDLDA 278 (293)
T ss_dssp GGGHHHHHHHTTCCCCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCCChHHhhh
Confidence 35778889999999999876533
No 117
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=20.49 E-value=36 Score=22.48 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=19.1
Q ss_pred ccCcchhHHHHHHHHHHHH-hCCcC
Q 042770 27 DLGLDNLDFVEIVMALKEE-FGFEI 50 (75)
Q Consensus 27 dlglDSl~~v~l~~~le~~-f~i~i 50 (75)
..|.||+.++.++..+... .|+++
T Consensus 21 SGG~DS~~Ll~ll~~~~~~~~g~~v 45 (433)
T 1ni5_A 21 SGGLDSTVLLHQLVQWRTENPGVAL 45 (433)
T ss_dssp CSBHHHHHHHHHHHHHHTTSTTCEE
T ss_pred cchHHHHHHHHHHHHHHHhcCCCeE
Confidence 5799999999999888665 56554
No 118
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=20.16 E-value=57 Score=15.05 Aligned_cols=17 Identities=18% Similarity=0.229 Sum_probs=11.0
Q ss_pred hHHHHHHhhhCCCCCCC
Q 042770 2 PIISVIKNFQNVDPFKV 18 (75)
Q Consensus 2 ~v~~ii~~~~~~~~~~i 18 (75)
.+.+.+.+.+|++++.+
T Consensus 21 ~it~~~~~~lg~~~~~v 37 (62)
T 3m20_A 21 RLTSVAAEIYGMDRSAI 37 (62)
T ss_dssp HHHHHHHHHHTCCTTSC
T ss_pred HHHHHHHHHhCcCcceE
Confidence 35566677778776654
Done!