BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042772
(489 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2V1A|A Chain A, N- And C-Terminal Helices Of Oat Lov2 (404-546) Are
Involved In Light-Induced Signal Transduction (Room
Temperature (293k) Dark Structure Of Lov2 (404-546))
pdb|2V1B|A Chain A, N- And C-Terminal Helices Of Oat Lov2 (404-546) Are
Involved In Light-Induced Signal Transduction (Room
Temperature (293k) Light Structure Of Lov2 (404-546))
Length = 144
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 125/192 (65%), Gaps = 49/192 (25%)
Query: 69 LATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEI 128
LATTLERIEKNFVITDPR+PDNPIIFASDSFL+LTE Y+REEI
Sbjct: 2 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTE------------------YSREEI 43
Query: 129 LGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLI 188
LGRNC F G +D+ATV KIRDA+ Q E+TVQLI
Sbjct: 44 LGRNCR--------------------FLQGP----ETDRATVRKIRDAIDNQTEVTVQLI 79
Query: 189 NYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLRNRLSEKTEQQSAKIVKA 248
NYTKSGKKFWNLFHLQPMRD KG++QYFIGVQLDG++HV + E++ ++K
Sbjct: 80 NYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHV-------RDAAEREGVMLIKK 132
Query: 249 TAENVNEAVREL 260
TAEN++EA +EL
Sbjct: 133 TAENIDEAAKEL 144
>pdb|2V0U|A Chain A, N- And C-terminal Helices Of Oat Lov2 (404-546) Are
Involved In Light-induced Signal Transduction (cryo Dark
Structure Of Lov2 (404-546))
pdb|2V0W|A Chain A, N- And C-Terminal Helices Of Oat Lov2 (404-546) Are
Involved In Light-Induced Signal Transduction (Cryo-
Trapped Light Structure Of Lov2 (404-546))
Length = 146
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 125/192 (65%), Gaps = 49/192 (25%)
Query: 69 LATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEI 128
LATTLERIEKNFVITDPR+PDNPIIFASDSFL+LTE Y+REEI
Sbjct: 4 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTE------------------YSREEI 45
Query: 129 LGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLI 188
LGRNC F G +D+ATV KIRDA+ Q E+TVQLI
Sbjct: 46 LGRNCR--------------------FLQGP----ETDRATVRKIRDAIDNQTEVTVQLI 81
Query: 189 NYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLRNRLSEKTEQQSAKIVKA 248
NYTKSGKKFWNLFHLQPMRD KG++QYFIGVQLDG++HV + E++ ++K
Sbjct: 82 NYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHV-------RDAAEREGVMLIKK 134
Query: 249 TAENVNEAVREL 260
TAEN++EA +EL
Sbjct: 135 TAENIDEAAKEL 146
>pdb|2WKP|A Chain A, Structure Of A Photoactivatable Rac1 Containing Lov2
Wildtype
Length = 332
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 125/192 (65%), Gaps = 49/192 (25%)
Query: 69 LATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEI 128
LATTLERIEKNFVITDPR+PDNPIIFASDSFL+LTE Y+REEI
Sbjct: 13 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTE------------------YSREEI 54
Query: 129 LGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLI 188
LGRNC F G +D+ATV KIRDA+ Q E+TVQLI
Sbjct: 55 LGRNC--------------------RFLQGP----ETDRATVRKIRDAIDNQTEVTVQLI 90
Query: 189 NYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLRNRLSEKTEQQSAKIVKA 248
NYTKSGKKFWNLFHLQPMRD KG++QYFIGVQLDG++HV + E++ ++K
Sbjct: 91 NYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVR-------DAAEREGVMLIKK 143
Query: 249 TAENVNEAVREL 260
TAEN++EA +EL
Sbjct: 144 TAENIDEAAKEL 155
>pdb|2WKQ|A Chain A, Structure Of A Photoactivatable Rac1 Containing The Lov2
C450a Mutant
Length = 332
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 124/192 (64%), Gaps = 49/192 (25%)
Query: 69 LATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEI 128
LATTLERIEKNFVITDPR+PDNPIIFASDSFL+LTE Y+REEI
Sbjct: 13 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTE------------------YSREEI 54
Query: 129 LGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLI 188
LGRN F G +D+ATV KIRDA+ Q E+TVQLI
Sbjct: 55 LGRNA--------------------RFLQGP----ETDRATVRKIRDAIDNQTEVTVQLI 90
Query: 189 NYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLRNRLSEKTEQQSAKIVKA 248
NYTKSGKKFWNLFHLQPMRD KG++QYFIGVQLDG++HV + E++ ++K
Sbjct: 91 NYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVR-------DAAEREGVMLIKK 143
Query: 249 TAENVNEAVREL 260
TAEN++EA +EL
Sbjct: 144 TAENIDEAAKEL 155
>pdb|2WKR|A Chain A, Structure Of A Photoactivatable Rac1 Containing The Lov2
C450m Mutant
Length = 332
Score = 191 bits (485), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 125/192 (65%), Gaps = 49/192 (25%)
Query: 69 LATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEI 128
LATTLERIEKNFVITDPR+PDNPIIFASDSFL+LTE Y+REEI
Sbjct: 13 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTE------------------YSREEI 54
Query: 129 LGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLI 188
LGRN + FL +D+ATV KIRDA+ Q E+TVQLI
Sbjct: 55 LGRN-------MRFLQ-----------------GPETDRATVRKIRDAIDNQTEVTVQLI 90
Query: 189 NYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLRNRLSEKTEQQSAKIVKA 248
NYTKSGKKFWNLFHLQPMRD KG++QYFIGVQLDG++HV + E++ ++K
Sbjct: 91 NYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVR-------DAAEREGVMLIKK 143
Query: 249 TAENVNEAVREL 260
TAEN++EA +EL
Sbjct: 144 TAENIDEAAKEL 155
>pdb|4EEP|A Chain A, Crystal Structure Of Lov2 Domain Of Arabidopsis Thaliana
Phototropin 2
Length = 115
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/154 (63%), Positives = 104/154 (67%), Gaps = 42/154 (27%)
Query: 74 ERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNC 133
E IEKNFVI+DPR+PDNPIIFASDSFLELTE Y+REEILGRNC
Sbjct: 4 EFIEKNFVISDPRLPDNPIIFASDSFLELTE------------------YSREEILGRNC 45
Query: 134 STYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKS 193
F G +DQATV KIRDA+R+QREITVQLINYTKS
Sbjct: 46 --------------------RFLQGP----ETDQATVQKIRDAIRDQREITVQLINYTKS 81
Query: 194 GKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHV 227
GKKFWNLFHLQPMRD KGELQYFIGVQLDGSDHV
Sbjct: 82 GKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHV 115
>pdb|4EER|A Chain A, Crystal Structure Of Lov2 Domain Of Arabidopsis Thaliana
Phototropin 2 C426a Mutant
Length = 115
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/154 (62%), Positives = 103/154 (66%), Gaps = 42/154 (27%)
Query: 74 ERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNC 133
E IEKNFVI+DPR+PDNPIIFASDSFLELTE Y+REEILGRN
Sbjct: 4 EFIEKNFVISDPRLPDNPIIFASDSFLELTE------------------YSREEILGRNA 45
Query: 134 STYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKS 193
F G +DQATV KIRDA+R+QREITVQLINYTKS
Sbjct: 46 --------------------RFLQGP----ETDQATVQKIRDAIRDQREITVQLINYTKS 81
Query: 194 GKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHV 227
GKKFWNLFHLQPMRD KGELQYFIGVQLDGSDHV
Sbjct: 82 GKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHV 115
>pdb|4EES|A Chain A, Crystal Structure Of Ilov
pdb|4EET|B Chain B, Crystal Structure Of Ilov
pdb|4EET|D Chain D, Crystal Structure Of Ilov
Length = 115
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 94/154 (61%), Positives = 100/154 (64%), Gaps = 42/154 (27%)
Query: 74 ERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNC 133
E IEKNFVITDPR+PDNPIIFASD FLELTE Y+REEILGRN
Sbjct: 4 EFIEKNFVITDPRLPDNPIIFASDGFLELTE------------------YSREEILGRNA 45
Query: 134 STYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKS 193
F G +DQATV KIRDA+R+QRE TVQLINYTKS
Sbjct: 46 --------------------RFLQGP----ETDQATVQKIRDAIRDQRETTVQLINYTKS 81
Query: 194 GKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHV 227
GKKFWNL HLQP+RD KGELQYFIGVQLDGSDHV
Sbjct: 82 GKKFWNLLHLQPVRDQKGELQYFIGVQLDGSDHV 115
>pdb|4EEU|A Chain A, Crystal Structure Of Philov2.1
Length = 118
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/154 (57%), Positives = 97/154 (62%), Gaps = 42/154 (27%)
Query: 74 ERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNC 133
E IEK+FVITDPR+PD PIIFASD FLELTE Y+REEI+GRN
Sbjct: 7 EFIEKSFVITDPRLPDYPIIFASDGFLELTE------------------YSREEIMGRNA 48
Query: 134 STYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKS 193
F G +DQATV KIRDA+R+QRE TVQLINYTKS
Sbjct: 49 --------------------RFLQGP----ETDQATVQKIRDAIRDQRETTVQLINYTKS 84
Query: 194 GKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHV 227
GKKFWNL HLQP+RD KG LQYFIGVQL GSDHV
Sbjct: 85 GKKFWNLLHLQPVRDRKGGLQYFIGVQLVGSDHV 118
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 107/163 (65%), Gaps = 6/163 (3%)
Query: 296 ITGSGEKIGLHHFKPIKPLGCGDTGSVHLVE---LQGAGELYAMKAMEKSVMLNRNKVHR 352
+ EK HF+ +K LG G G V LV +G LYAMK ++K+ + R++V R
Sbjct: 18 VKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV-R 76
Query: 353 ACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF 412
+ER+I++ ++HPF+ L+ +FQT + LI DF GG+LF L K+ M F E+ +F
Sbjct: 77 TKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKF 134
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y AE+ +GL++LH LGIIYRDLKPENILL ++GH+ LTDF LS
Sbjct: 135 YLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 177
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 98/154 (63%), Gaps = 2/154 (1%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
K L F+ ++ LG G G VHL+ + G YAMK ++K +++ +V ER ++S
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
++ HPF+ ++ +FQ + I +I D+ GGELF+LL K + F A+FYAAEV + L
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLAL 119
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
EYLH IIYRDLKPENILL K+GH+ +TDF +
Sbjct: 120 EYLHSKDIIYRDLKPENILLDKNGHIKITDFGFA 153
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 7/169 (4%)
Query: 291 IAIQKITGSG-EKIGLHHFKPIKPLGCGDTGSVHLVE-LQG--AGELYAMKAMEKSVMLN 346
IAI G EK F+ +K LG G G V LV+ + G A +LYAMK ++K+ +
Sbjct: 9 IAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV 68
Query: 347 RNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFR 406
R++V R +ER+I+ ++HPF+ L+ +FQT + LI DF GG+LF L K+ M F
Sbjct: 69 RDRV-RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FT 125
Query: 407 EDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
E+ +FY AE+ + L++LH LGIIYRDLKPENILL ++GH+ LTDF LS
Sbjct: 126 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 174
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 7/169 (4%)
Query: 291 IAIQKITGSG-EKIGLHHFKPIKPLGCGDTGSVHLVE-LQG--AGELYAMKAMEKSVMLN 346
IAI G EK F+ +K LG G G V LV+ + G A +LYAMK ++K+ +
Sbjct: 8 IAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV 67
Query: 347 RNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFR 406
R++V R +ER+I+ ++HPF+ L+ +FQT + LI DF GG+LF L K+ M F
Sbjct: 68 RDRV-RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FT 124
Query: 407 EDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
E+ +FY AE+ + L++LH LGIIYRDLKPENILL ++GH+ LTDF LS
Sbjct: 125 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 7/169 (4%)
Query: 291 IAIQKITGSG-EKIGLHHFKPIKPLGCGDTGSVHLVE-LQG--AGELYAMKAMEKSVMLN 346
IAI G EK F+ +K LG G G V LV+ + G A +LYAMK ++K+ +
Sbjct: 8 IAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV 67
Query: 347 RNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFR 406
R++V R +ER+I+ ++HPF+ L+ +FQT + LI DF GG+LF L K+ M F
Sbjct: 68 RDRV-RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FT 124
Query: 407 EDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
E+ +FY AE+ + L++LH LGIIYRDLKPENILL ++GH+ LTDF LS
Sbjct: 125 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
>pdb|1G28|A Chain A, Structure Of A Flavin-Binding Domain, Lov2, From The
Chimeric PhytochromePHOTOTROPIN PHOTORECEPTOR PHY3
pdb|1G28|B Chain B, Structure Of A Flavin-Binding Domain, Lov2, From The
Chimeric PhytochromePHOTOTROPIN PHOTORECEPTOR PHY3
pdb|1G28|C Chain C, Structure Of A Flavin-Binding Domain, Lov2, From The
Chimeric PhytochromePHOTOTROPIN PHOTORECEPTOR PHY3
pdb|1G28|D Chain D, Structure Of A Flavin-Binding Domain, Lov2, From The
Chimeric PhytochromePHOTOTROPIN PHOTORECEPTOR PHY3
pdb|1JNU|A Chain A, Photoexcited Structure Of The Plant Photoreceptor Domain,
Phy3 Lov2
pdb|1JNU|B Chain B, Photoexcited Structure Of The Plant Photoreceptor Domain,
Phy3 Lov2
pdb|1JNU|C Chain C, Photoexcited Structure Of The Plant Photoreceptor Domain,
Phy3 Lov2
pdb|1JNU|D Chain D, Photoexcited Structure Of The Plant Photoreceptor Domain,
Phy3 Lov2
Length = 104
Score = 135 bits (339), Expect = 7e-32, Method: Composition-based stats.
Identities = 72/143 (50%), Positives = 85/143 (59%), Gaps = 42/143 (29%)
Query: 78 KNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYT 137
K+FVITDPR+PDNPIIFASD FLELTE YTREE+LG NC
Sbjct: 1 KSFVITDPRLPDNPIIFASDRFLELTE------------------YTREEVLGNNC---- 38
Query: 138 FMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKF 197
F G +D+ V IRDAV+EQR++TVQ++NYTK G+ F
Sbjct: 39 ----------------RFLQG----RGTDRKAVQLIRDAVKEQRDVTVQVLNYTKGGRAF 78
Query: 198 WNLFHLQPMRDHKGELQYFIGVQ 220
WNLFHLQ MRD G++QYFIGVQ
Sbjct: 79 WNLFHLQVMRDENGDVQYFIGVQ 101
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 296 ITGSGEKIGLHHFKPIKPLGCGDTGSVHLV-ELQG--AGELYAMKAMEKSVMLNRNKV-H 351
+TG EK+G+ +F+ +K LG G G V LV ++ G G+LYAMK ++K+ ++ + K
Sbjct: 44 LTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTE 103
Query: 352 RACIEREIMS-LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSA 410
ER+++ + PFL TL+ +FQT T + LI D+ GGELF L ++ F E
Sbjct: 104 HTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER--FTEHEV 161
Query: 411 RFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ Y E+V+ LE+LH LGIIYRD+K ENILL +GHVVLTDF LS
Sbjct: 162 QIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS 206
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
K+ ++ F +K LG G G V LV + G YAMK + K V++ +++V E ++
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
HPFL L +FQT +C + ++ GGELF L ++ ++F E+ ARFY AE+V L
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSAL 121
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
EYLH ++YRD+K EN++L KDGH+ +TDF L
Sbjct: 122 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 154
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 98/156 (62%), Gaps = 3/156 (1%)
Query: 300 GEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI 359
G ++ ++ F+ +K LG G G V LV+ + G YAMK ++K V++ +++V E +
Sbjct: 2 GSRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 61
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
+ HPFL L SFQT +C + ++ GGELF L ++ ++F ED ARFY AE+V
Sbjct: 62 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVS 119
Query: 420 GLEYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDL 454
L+YLH ++YRDLK EN++L KDGH+ +TDF L
Sbjct: 120 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 155
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
K+ ++ F +K LG G G V LV + G YAMK + K V++ +++V E ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
HPFL L +FQT +C + ++ GGELF L ++ ++F E+ ARFY AE+V L
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSAL 118
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
EYLH ++YRD+K EN++L KDGH+ +TDF L
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
K+ ++ F +K LG G G V LV + G YAMK + K V++ +++V E ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
HPFL L +FQT +C + ++ GGELF L ++ ++F E+ ARFY AE+V L
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSAL 118
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
EYLH ++YRD+K EN++L KDGH+ +TDF L
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
K+ ++ F +K LG G G V LV + G YAMK + K V++ +++V E ++
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
HPFL L +FQT +C + ++ GGELF L ++ ++F E+ ARFY AE+V L
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSAL 123
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
EYLH ++YRD+K EN++L KDGH+ +TDF L
Sbjct: 124 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 156
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
K+ ++ F +K LG G G V LV + G YAMK + K V++ +++V E ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
HPFL L +FQT +C + ++ GGELF L ++ ++F E+ ARFY AE+V L
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSAL 118
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
EYLH ++YRD+K EN++L KDGH+ +TDF L
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
K+ ++ F +K LG G G V LV + G YAMK + K V++ +++V E ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
HPFL L +FQT +C + ++ GGELF L ++ ++F E+ ARFY AE+V L
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSAL 118
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
EYLH ++YRD+K EN++L KDGH+ +TDF L
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
K+ ++ F +K LG G G V LV + G YAMK + K V++ +++V E ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
HPFL L +FQT +C + ++ GGELF L ++ ++F E+ ARFY AE+V L
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSAL 118
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
EYLH ++YRD+K EN++L KDGH+ +TDF L
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 99/158 (62%), Gaps = 3/158 (1%)
Query: 298 GSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIER 357
G+ ++ ++ F+ +K LG G G V LV+ + G YAMK ++K V++ +++V E
Sbjct: 1 GAMARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN 60
Query: 358 EIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEV 417
++ HPFL L SFQT +C + ++ GGELF L ++ ++F ED ARFY AE+
Sbjct: 61 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEI 118
Query: 418 VIGLEYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDL 454
V L+YLH ++YRDLK EN++L KDGH+ +TDF L
Sbjct: 119 VSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 156
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
++ ++ F+ +K LG G G V LV+ + G YAMK ++K V++ +++V E ++
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
HPFL L SFQT +C + ++ GGELF L ++ ++F ED ARFY AE+V L
Sbjct: 207 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSAL 264
Query: 422 EYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDL 454
+YLH ++YRDLK EN++L KDGH+ +TDF L
Sbjct: 265 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 298
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
++ ++ F+ +K LG G G V LV+ + G YAMK ++K V++ +++V E ++
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 203
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
HPFL L SFQT +C + ++ GGELF L ++ ++F ED ARFY AE+V L
Sbjct: 204 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSAL 261
Query: 422 EYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDL 454
+YLH ++YRDLK EN++L KDGH+ +TDF L
Sbjct: 262 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 295
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
++ ++ F+ +K LG G G V LV+ + G YAMK ++K V++ +++V E ++
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
HPFL L SFQT +C + ++ GGELF L ++ ++F ED ARFY AE+V L
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSAL 123
Query: 422 EYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDL 454
+YLH ++YRDLK EN++L KDGH+ +TDF L
Sbjct: 124 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 157
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ + G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 158
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ + G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 158
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ + G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 150
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 181
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ + G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 158
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+++ + G++ +TDF L+
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGLA 188
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+++ + G++ +TDF L+
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGLA 188
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ + G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYL 150
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 181
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ + G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 178
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 209
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ + G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 158
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+++ + G++ +TDF +
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 189
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 158
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 158
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYL 157
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYL 157
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYL 158
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 158
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+++ + G++ +TDF +
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 189
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 158
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+++ + G++ +TDF +
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 189
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYL 158
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+++ + G++ +TDF +
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 189
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 143
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 144 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 174
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+++ + G++ +TDF +
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGFA 188
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ + G +AMK ++K ++ ++ E+ I+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+++ + G++ +TDF +
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 188
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ + G +AMK ++K ++ ++ E+ I+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ + G +AMK ++K ++ ++ E+ I+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYL 157
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+++ + G++ +TDF +
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 188
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQ 149
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQ 149
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 33 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQ 150
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQ 149
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQ 149
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQ 149
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQ 149
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQ 149
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQ 149
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQ 149
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQ 149
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 27 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 86
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 87 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQ 144
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 145 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 183
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQ 149
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFAEPHARFYAAQ 149
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQ 149
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 19 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 78
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 79 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQ 136
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 137 IVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFA 175
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQ 149
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 101/173 (58%), Gaps = 8/173 (4%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
K+ + F+ K LG G G V L E + + +A+KA++K V+L + V +E+ ++S
Sbjct: 14 KLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 73
Query: 362 LL-DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIG 420
L +HPFL ++ +FQT ++ + ++ GG+L + Q F A FYAAE+++G
Sbjct: 74 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILG 131
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGF 473
L++LH GI+YRDLK +NILL KDGH+ + DF + CK + A N F
Sbjct: 132 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM-----CKENMLGDAKTNEF 179
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 178
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 209
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYL 178
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 209
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
S ++G+ +F+ I+ LG G G V L ++ G+LYA+K ++K V+L + V E
Sbjct: 14 VNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTE 73
Query: 357 REIMSLL-DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
+ I+SL +HPFL L+ FQT + + +F GG+L + Q + F E ARFYAA
Sbjct: 74 KRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAA 131
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK 461
E++ L +LH GIIYRDLK +N+LL +GH L DF + C
Sbjct: 132 EIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK +G G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ + DF +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFA 188
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T S L F IK LG G G V LV+ + +G YAMK ++K ++ ++ E
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ I+ ++ PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA+
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQ 149
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V+ EYLH L +IYRDLKPEN+++ + G++ +TDF +
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFA 188
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ I+ LG G G V LV+ + G YAMK ++K ++ ++ E+ I ++
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 158
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ + DF +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIKVADFGFA 189
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK LG G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ GGE+F+ L + + F E ARFYAA++V+ EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ +TDF +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 100/173 (57%), Gaps = 8/173 (4%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
K+ + F K LG G G V L E + + +A+KA++K V+L + V +E+ ++S
Sbjct: 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 72
Query: 362 LL-DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIG 420
L +HPFL ++ +FQT ++ + ++ GG+L + Q F A FYAAE+++G
Sbjct: 73 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILG 130
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGF 473
L++LH GI+YRDLK +NILL KDGH+ + DF + CK + A N F
Sbjct: 131 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM-----CKENMLGDAKTNXF 178
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 96/168 (57%), Gaps = 10/168 (5%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIM-SLLDH 365
HF +K +G G G V L + YA+K ++K +L + + ER ++ + H
Sbjct: 41 HF--LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH 425
PFL L+ SFQT+ + + D+ GGELF L ++ + F E ARFYAAE+ L YLH
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLH 156
Query: 426 CLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGF 473
L I+YRDLKPENILL GH+VLTDF L CK + +++ + F
Sbjct: 157 SLNIVYRDLKPENILLDSQGHIVLTDFGL-----CKENIEHNSTTSTF 199
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK +G G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGG++F+ L + + F E ARFYAA++V+ EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ + DF +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFA 188
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L F+ IK +G G G V LV+ G YAMK ++K ++ ++ E+ I+ ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
PFL L SF+ ++++ ++ ++ PGG++F+ L + + F E ARFYAA++V+ EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H L +IYRDLKPEN+L+ + G++ + DF +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFA 188
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 16/206 (7%)
Query: 296 ITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACI 355
+ E + HF+ ++ +G G G V +V+ ++YAMK M K + RN+V
Sbjct: 5 VFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E +IM L+HPFL L+ SFQ + ++ D GG+L L + F+E++ + +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKLFIC 122
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS--------------CK 461
E+V+ L+YL II+RD+KP+NILL + GHV +TDF+++ M
Sbjct: 123 ELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMA 182
Query: 462 PQVFYHAHVNGFYFIMYKWLTGYFTY 487
P++F G+ F + W G Y
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAY 208
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 6/158 (3%)
Query: 301 EKIGLHHFKPIKPLGCGDTGSVHLV-ELQGA--GELYAMKAMEKSVML-NRNKVHRACIE 356
EKI F+ ++ LG G G V V ++ GA G+++AMK ++K++++ N E
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
R I+ + HPF+ L +FQT + LI ++ GGELF L+++ IF ED+A FY AE
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAE 129
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
+ + L +LH GIIYRDLKPENI+L GHV LTDF L
Sbjct: 130 ISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 6/158 (3%)
Query: 301 EKIGLHHFKPIKPLGCGDTGSVHLV-ELQGA--GELYAMKAMEKSVML-NRNKVHRACIE 356
EKI F+ ++ LG G G V V ++ GA G+++AMK ++K++++ N E
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
R I+ + HPF+ L +FQT + LI ++ GGELF L+++ IF ED+A FY AE
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAE 129
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
+ + L +LH GIIYRDLKPENI+L GHV LTDF L
Sbjct: 130 ISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 89/166 (53%), Gaps = 5/166 (3%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 428 GIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGF 473
GII+RDLKPENILL +D H+ +TDF + + S + + A N F
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK---QARANAF 192
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 89/166 (53%), Gaps = 5/166 (3%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 428 GIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGF 473
GII+RDLKPENILL +D H+ +TDF + + S + + A N F
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK---QARANSF 191
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
GII+RDLKPENILL +D H+ +TDF
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDF 153
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
GII+RDLKPENILL +D H+ +TDF
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDF 152
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
GII+RDLKPENILL +D H+ +TDF
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDF 151
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
GII+RDLKPENILL +D H+ +TDF
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDF 154
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
GII+RDLKPENILL +D H+ +TDF
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDF 173
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 89/166 (53%), Gaps = 5/166 (3%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 428 GIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGF 473
GII+RDLKPENILL +D H+ +TDF + + S + + A N F
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK---QARANSF 195
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
GII+RDLKPENILL +D H+ +TDF
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDF 158
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
GII+RDLKPENILL +D H+ +TDF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
GII+RDLKPENILL +D H+ +TDF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
GII+RDLKPENILL +D H+ +TDF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
GII+RDLKPENILL +D H+ +TDF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
GII+RDLKPENILL +D H+ +TDF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
GII+RDLKPENILL +D H+ +TDF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
GII+RDLKPENILL +D H+ +TDF
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDF 177
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 95/155 (61%), Gaps = 3/155 (1%)
Query: 301 EKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIM 360
+++ L F + LG G G V L + +G ELYA+K ++K V++ + V +E+ ++
Sbjct: 14 DRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVL 73
Query: 361 SLLDHP-FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
+LLD P FL L++ FQT + + ++ GG+L + Q + F+E A FYAAE+ I
Sbjct: 74 ALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISI 131
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
GL +LH GIIYRDLK +N++L +GH+ + DF +
Sbjct: 132 GLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGM 166
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
GII+RDLKPENILL +D H+ +TDF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
GII+RDLKPENILL +D H+ +TDF
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDF 179
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
GII+RDLKPENILL +D H+ +TDF
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDF 181
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G + L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + GEL + K + F E RFY AE+V LEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
GII+RDLKPENILL +D H+ +TDF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 88/166 (53%), Gaps = 5/166 (3%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
FK K LG G +V L YA+K +EK ++ NKV ER++MS LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
LY +FQ + + G L + K + F E RFY AE+V LEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 428 GIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGF 473
GII+RDLKPENILL +D H+ +TDF + + S + + A N F
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK---QARANSF 194
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
++ ++ +K +G G G V LV + ++YAMK + K M+ R+ ER+IM+
Sbjct: 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 124
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
+ P++ L+ +FQ ++ ++ ++ PGG+L L+ + E ARFY AEVV+ L
Sbjct: 125 FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVP---EKWARFYTAEVVLAL 181
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDF 452
+ +H +G I+RD+KP+N+LL K GH+ L DF
Sbjct: 182 DAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 212
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 20/205 (9%)
Query: 300 GEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI 359
G ++ + +K +G G G V LV + + ++YAMK + K M+ R+ ER+I
Sbjct: 69 GLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDI 128
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
M+ + P++ L+ +FQ ++ ++ ++ PGG+L L+ + E A+FY AEVV+
Sbjct: 129 MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVP---EKWAKFYTAEVVL 185
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDF------DLSFMTSC----------KPQ 463
L+ +H +G+I+RD+KP+N+LL K GH+ L DF D + M C P+
Sbjct: 186 ALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPE 245
Query: 464 VFYHAHVNGFYFIMYKWLT-GYFTY 487
V +G+Y W + G F +
Sbjct: 246 VLKSQGGDGYYGRECDWWSVGVFLF 270
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
++ ++ +K +G G G V LV + ++YAMK + K M+ R+ ER+IM+
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
+ P++ L+ +FQ ++ ++ ++ PGG+L L+ + E ARFY AEVV+ L
Sbjct: 130 FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVP---EKWARFYTAEVVLAL 186
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDF 452
+ +H +G I+RD+KP+N+LL K GH+ L DF
Sbjct: 187 DAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 217
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
++ ++ +K +G G G V LV + ++YAMK + K M+ R+ ER+IM+
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
+ P++ L+ +FQ ++ ++ ++ PGG+L L+ + E ARFY AEVV+ L
Sbjct: 130 FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVP---EKWARFYTAEVVLAL 186
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDF 452
+ +H +G I+RD+KP+N+LL K GH+ L DF
Sbjct: 187 DAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 217
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 94/159 (59%), Gaps = 3/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
G+ +++ L F + LG G G V L E +G ELYA+K ++K V++ + V +E
Sbjct: 11 NGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVE 70
Query: 357 REIMSLLDHP-FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
+ +++L P FL L++ FQT + + ++ GG+L + Q + F+E A FYAA
Sbjct: 71 KRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAA 128
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
E+ IGL +L GIIYRDLK +N++L +GH+ + DF +
Sbjct: 129 EIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 167
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 94/159 (59%), Gaps = 3/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
G+ +++ L F + LG G G V L E +G ELYA+K ++K V++ + V +E
Sbjct: 332 NGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVE 391
Query: 357 REIMSLLDHP-FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
+ +++L P FL L++ FQT + + ++ GG+L + Q + F+E A FYAA
Sbjct: 392 KRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAA 449
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
E+ IGL +L GIIYRDLK +N++L +GH+ + DF +
Sbjct: 450 EIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 488
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 93/158 (58%), Gaps = 3/158 (1%)
Query: 298 GSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIER 357
G+ + +GL F ++ +G G V LV L+ +YAMK ++K ++ + + E+
Sbjct: 1 GAMDPLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEK 60
Query: 358 EIMSLL-DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+ +HPFL L++ FQT + + + ++ GG+L + +Q + E+ ARFY+AE
Sbjct: 61 HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAE 118
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
+ + L YLH GIIYRDLK +N+LL +GH+ LTD+ +
Sbjct: 119 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 156
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 91/157 (57%), Gaps = 3/157 (1%)
Query: 299 SGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE 358
+ +GL F ++ +G G V LV L+ +YAMK ++K ++ + + E+
Sbjct: 13 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH 72
Query: 359 IMSLL-DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEV 417
+ +HPFL L++ FQT + + + ++ GG+L + +Q + E+ ARFY+AE+
Sbjct: 73 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEI 130
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
+ L YLH GIIYRDLK +N+LL +GH+ LTD+ +
Sbjct: 131 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 167
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Query: 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
+GL F ++ +G G V LV L+ +YAMK ++K ++ + + E+ +
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 363 L-DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
+HPFL L++ FQT + + + ++ GG+L + +Q + E+ ARFY+AE+ + L
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 119
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
YLH GIIYRDLK +N+LL +GH+ LTD+ +
Sbjct: 120 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 152
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 91/157 (57%), Gaps = 3/157 (1%)
Query: 299 SGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE 358
+ +GL F ++ +G G V LV L+ +YAM+ ++K ++ + + E+
Sbjct: 45 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKH 104
Query: 359 IMSLL-DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEV 417
+ +HPFL L++ FQT + + + ++ GG+L + +Q + E+ ARFY+AE+
Sbjct: 105 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEI 162
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
+ L YLH GIIYRDLK +N+LL +GH+ LTD+ +
Sbjct: 163 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 199
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 89/147 (60%), Gaps = 5/147 (3%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACI--EREIMSLLDH 365
F+ IK +G G G V +V+++ +YAMK + K ML R + AC ER+++ D
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAET--ACFREERDVLVNGDC 149
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH 425
++ L+ +FQ H+ L+ D+ GG+L LL K K+ ED ARFY E+V+ ++ +H
Sbjct: 150 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKL-PEDMARFYIGEMVLAIDSIH 208
Query: 426 CLGIIYRDLKPENILLQKDGHVVLTDF 452
L ++RD+KP+N+LL +GH+ L DF
Sbjct: 209 QLHYVHRDIKPDNVLLDVNGHIRLADF 235
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 89/147 (60%), Gaps = 5/147 (3%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACI--EREIMSLLDH 365
F+ IK +G G G V +V+++ +YAMK + K ML R + AC ER+++ D
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAET--ACFREERDVLVNGDC 133
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH 425
++ L+ +FQ H+ L+ D+ GG+L LL K K+ ED ARFY E+V+ ++ +H
Sbjct: 134 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKL-PEDMARFYIGEMVLAIDSIH 192
Query: 426 CLGIIYRDLKPENILLQKDGHVVLTDF 452
L ++RD+KP+N+LL +GH+ L DF
Sbjct: 193 QLHYVHRDIKPDNVLLDVNGHIRLADF 219
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 100/163 (61%), Gaps = 7/163 (4%)
Query: 294 QKITGSGEKIGLHH--FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVH 351
+ T +++ LH F+ +K +G G G V +V+L+ A +++AMK + K ML R +
Sbjct: 60 KPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAET- 118
Query: 352 RACI--EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDS 409
AC ER+++ D ++ TL+ +FQ ++ L+ D+ GG+L LL K ++ E+
Sbjct: 119 -ACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRL-PEEM 176
Query: 410 ARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDF 452
ARFY AE+VI ++ +H L ++RD+KP+NIL+ +GH+ L DF
Sbjct: 177 ARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADF 219
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 90/145 (62%), Gaps = 1/145 (0%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
F+ +K +G G V +V+++ G++YAMK M K ML R +V ER+++ D +
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRW 122
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
+ L+ +FQ ++ L+ ++ GG+L LL K +I E ARFY AE+V+ ++ +H L
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAE-MARFYLAEIVMAIDSVHRL 181
Query: 428 GIIYRDLKPENILLQKDGHVVLTDF 452
G ++RD+KP+NILL + GH+ L DF
Sbjct: 182 GYVHRDIKPDNILLDRCGHIRLADF 206
>pdb|3ULF|A Chain A, The Light State Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
pdb|3ULF|B Chain B, The Light State Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
pdb|3ULF|C Chain C, The Light State Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
pdb|3ULF|D Chain D, The Light State Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
pdb|3ULF|E Chain E, The Light State Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
pdb|3ULF|F Chain F, The Light State Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
Length = 170
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 75/152 (49%), Gaps = 42/152 (27%)
Query: 69 LATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEI 128
L L+ ++NFVITD +PDNPI++AS FL LT Y+ ++ILGRNC FL+ E
Sbjct: 41 LVKALQMAQQNFVITDASLPDNPIVYASRGFLTLTGYSLDQILGRNCRFLQGPE------ 94
Query: 129 LGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLI 188
+D V KIR+A+ + + +V L+
Sbjct: 95 ------------------------------------TDPRAVDKIRNAITKGVDTSVCLL 118
Query: 189 NYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQ 220
NY + G FWNLF + +RD KG + ++GVQ
Sbjct: 119 NYRQDGTTFWNLFFVAGLRDSKGNIVNYVGVQ 150
>pdb|3UE6|A Chain A, The Dark Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
pdb|3UE6|B Chain B, The Dark Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
pdb|3UE6|C Chain C, The Dark Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
pdb|3UE6|D Chain D, The Dark Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
pdb|3UE6|E Chain E, The Dark Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
pdb|3UE6|F Chain F, The Dark Structure Of The Blue-light Photoreceptor
Aureochrome1 Lov
Length = 166
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 75/152 (49%), Gaps = 42/152 (27%)
Query: 69 LATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEI 128
L L+ ++NFVITD +PDNPI++AS FL LT Y+ ++ILGRNC FL+ E
Sbjct: 37 LVKALQMAQQNFVITDASLPDNPIVYASRGFLTLTGYSLDQILGRNCRFLQGPE------ 90
Query: 129 LGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLI 188
+D V KIR+A+ + + +V L+
Sbjct: 91 ------------------------------------TDPRAVDKIRNAITKGVDTSVCLL 114
Query: 189 NYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQ 220
NY + G FWNLF + +RD KG + ++GVQ
Sbjct: 115 NYRQDGTTFWNLFFVAGLRDSKGNIVNYVGVQ 146
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 87/156 (55%), Gaps = 5/156 (3%)
Query: 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
+ ++ F + +G G G V+ G++YAMK ++K + + A ER ++SL
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 363 L---DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
+ D PF+ + +F T + I D GG+L L + +F E RFYAAE+++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIIL 303
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
GLE++H ++YRDLKP NILL + GHV ++D L+
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 87/156 (55%), Gaps = 5/156 (3%)
Query: 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
+ ++ F + +G G G V+ G++YAMK ++K + + A ER ++SL
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 244
Query: 363 L---DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
+ D PF+ + +F T + I D GG+L L + +F E RFYAAE+++
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIIL 302
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
GLE++H ++YRDLKP NILL + GHV ++D L+
Sbjct: 303 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 87/156 (55%), Gaps = 5/156 (3%)
Query: 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
+ ++ F + +G G G V+ G++YAMK ++K + + A ER ++SL
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 363 L---DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
+ D PF+ + +F T + I D GG+L L + +F E RFYAAE+++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIIL 303
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
GLE++H ++YRDLKP NILL + GHV ++D L+
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 87/156 (55%), Gaps = 5/156 (3%)
Query: 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
+ ++ F + +G G G V+ G++YAMK ++K + + A ER ++SL
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 363 L---DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
+ D PF+ + +F T + I D GG+L L + +F E RFYAAE+++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIIL 303
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
GLE++H ++YRDLKP NILL + GHV ++D L+
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 91/160 (56%), Gaps = 6/160 (3%)
Query: 300 GEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI 359
+ +G F + LG G G V +++ G+LYA K + K + R A +E++I
Sbjct: 179 AQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGEL----FALLDKQPMKIFREDSARFYAA 415
++ + F+ +L +F+T T +CL+ GG++ + + + P F+E A FY A
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTA 296
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++V GLE+LH IIYRDLKPEN+LL DG+V ++D L+
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 91/160 (56%), Gaps = 6/160 (3%)
Query: 300 GEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI 359
+ +G F + LG G G V +++ G+LYA K + K + R A +E++I
Sbjct: 179 AQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGEL----FALLDKQPMKIFREDSARFYAA 415
++ + F+ +L +F+T T +CL+ GG++ + + + P F+E A FY A
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTA 296
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++V GLE+LH IIYRDLKPEN+LL DG+V ++D L+
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 91/160 (56%), Gaps = 6/160 (3%)
Query: 300 GEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI 359
+ +G F + LG G G V +++ G+LYA K + K + R A +E++I
Sbjct: 179 AQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGEL----FALLDKQPMKIFREDSARFYAA 415
++ + F+ +L +F+T T +CL+ GG++ + + + P F+E A FY A
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTA 296
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++V GLE+LH IIYRDLKPEN+LL DG+V ++D L+
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 91/160 (56%), Gaps = 6/160 (3%)
Query: 300 GEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI 359
+ +G F + LG G G V +++ G+LYA K + K + R A +E++I
Sbjct: 179 AQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGEL----FALLDKQPMKIFREDSARFYAA 415
++ + F+ +L +F+T T +CL+ GG++ + + + P F+E A FY A
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTA 296
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++V GLE+LH IIYRDLKPEN+LL DG+V ++D L+
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|2Z6D|A Chain A, Crystal Structure Of Lov1 Domain Of Phototropin2 From
Arabidopsis Thaliana
pdb|2Z6D|B Chain B, Crystal Structure Of Lov1 Domain Of Phototropin2 From
Arabidopsis Thaliana
Length = 130
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 42/166 (25%)
Query: 68 DLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREE 127
+L T L +++ FV++D P PI++AS F +T Y+ +EI+GRNC FL+ +
Sbjct: 7 ELKTALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQGPD----- 61
Query: 128 ILGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQL 187
+D+ V+KIRD V+ + +L
Sbjct: 62 -------------------------------------TDKNEVAKIRDCVKNGKSYCGRL 84
Query: 188 INYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLRNR 233
+NY K G FWNL + P++D +G FIG+Q++ S + E + ++
Sbjct: 85 LNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVSKYTEGVNDK 130
>pdb|3T50|A Chain A, X-Ray Structure Of The Lov Domain From The Lov-Hk Sensory
Protein From Brucella Abortus (Dark State).
pdb|3T50|B Chain B, X-Ray Structure Of The Lov Domain From The Lov-Hk Sensory
Protein From Brucella Abortus (Dark State)
Length = 128
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 72/143 (50%), Gaps = 42/143 (29%)
Query: 80 FVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFM 139
+IT+P +PDNPI+FA N +FL+LT Y +E++GRNC
Sbjct: 10 MLITNPHLPDNPIVFA------------------NPAFLKLTGYEADEVMGRNCR----- 46
Query: 140 LYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWN 199
FL + +G +D A V I+ A+ ++ I + +INY KSG+ FWN
Sbjct: 47 --FL----QGHG-------------TDPAHVRAIKSAIAAEKPIDIDIINYKKSGEAFWN 87
Query: 200 LFHLQPMRDHKGELQYFIGVQLD 222
H+ P+ + G LQ+F+ QLD
Sbjct: 88 RLHISPVHNANGRLQHFVSSQLD 110
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P GE++ L K + F E Y E+ L Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK--LSKFDEQRTATYITELANALSY 128
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 290 WIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNK 349
W+ Q +T + F+ + LG G G V +++ G++YA K +EK + R
Sbjct: 175 WLERQPVTK-------NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG 227
Query: 350 VHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDS 409
A E++I+ ++ F+ +L +++T +CL+ GG+L + F E
Sbjct: 228 EAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEAR 287
Query: 410 ARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
A FYAAE+ GLE LH I+YRDLKPENILL GH+ ++D L+
Sbjct: 288 AVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P GE++ L K + F E Y E+ L Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK--LSKFDEQRTATYITELANALSY 128
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 290 WIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNK 349
W+ Q +T + F+ + LG G G V +++ G++YA K +EK + R
Sbjct: 175 WLERQPVTK-------NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG 227
Query: 350 VHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDS 409
A E++I+ ++ F+ +L +++T +CL+ GG+L + F E
Sbjct: 228 EAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEAR 287
Query: 410 ARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
A FYAAE+ GLE LH I+YRDLKPENILL GH+ ++D L+
Sbjct: 288 AVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Query: 298 GSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIER 357
GS + L F+ +PLG G G+V+L + + + A+K + K+ + H+ E
Sbjct: 4 GSKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 63
Query: 358 EIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEV 417
EI S L HP + LY F +T + LI ++ P G ++ L K + F E Y E+
Sbjct: 64 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITEL 121
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L Y H +I+RD+KPEN+LL G + + DF S
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 159
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Query: 298 GSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIER 357
GS + L F +PLG G G+V+L + + + A+K + K+ + H+ E
Sbjct: 4 GSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREV 63
Query: 358 EIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEV 417
EI S L HP + LY F +T + LI ++ P G ++ L K + F E Y E+
Sbjct: 64 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSRFDEQRTATYITEL 121
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L Y H +I+RD+KPEN+LL +G + + DF S
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS 159
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Query: 298 GSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIER 357
GS + L F +PLG G G+V+L + + + A+K + K+ + H+ E
Sbjct: 4 GSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREV 63
Query: 358 EIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEV 417
EI S L HP + LY F +T + LI ++ P G ++ L K + F E Y E+
Sbjct: 64 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSRFDEQRTATYITEL 121
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L Y H +I+RD+KPEN+LL +G + + DF S
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS 159
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F ST + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 123
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 124 CHSKKVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Query: 298 GSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIER 357
G + L F+ +PLG G G+V+L + + + A+K + K+ + H+ E
Sbjct: 1 GKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 358 EIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEV 417
EI S L HP + LY F +T + LI ++ P G ++ L K + F E Y E+
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITEL 118
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L Y H +I+RD+KPEN+LL G + + DF S
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 3/181 (1%)
Query: 276 QPVFPRPHKRDNSSWIAIQKITGSGEKI-GLHHFKPIKPLGCGDTGSVHLVELQGAGELY 334
QP+ P + QK S ++ L F+ +PLG G G+V+L + + +
Sbjct: 3 QPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL 62
Query: 335 AMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELF 394
A+K + K+ + H+ E EI S L HP + LY F +T + LI ++ P G ++
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 122
Query: 395 ALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
L K + F E Y E+ L Y H +I+RD+KPEN+LL G + + DF
Sbjct: 123 RELQK--LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 180
Query: 455 S 455
S
Sbjct: 181 S 181
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T GEKI FK LG G V+ E G A+K ++K M V R E
Sbjct: 4 TCIGEKI--EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNE 61
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+I L HP + LY F+ S ++ L+ + C GE+ L K +K F E+ AR + +
Sbjct: 62 VKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL-KNRVKPFSENEARHFMHQ 120
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ G+ YLH GI++RDL N+LL ++ ++ + DF L+
Sbjct: 121 IITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLA 159
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 3/181 (1%)
Query: 276 QPVFPRPHKRDNSSWIAIQKITGSGEK-IGLHHFKPIKPLGCGDTGSVHLVELQGAGELY 334
QP+ P + QK S ++ L F+ +PLG G G+V+L + + +
Sbjct: 3 QPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL 62
Query: 335 AMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELF 394
A+K + K+ + H+ E EI S L HP + LY F +T + LI ++ P G ++
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 122
Query: 395 ALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
L K + F E Y E+ L Y H +I+RD+KPEN+LL G + + DF
Sbjct: 123 RELQK--LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 180
Query: 455 S 455
S
Sbjct: 181 S 181
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 140
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 141 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 172
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 128
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 126
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 125
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 157
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 124
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 124
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 123
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 123
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 128
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 126
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 123
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 128
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 126
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 126
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 122
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 123 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 154
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 123
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 123
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 123
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 123
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 126
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|1N9L|A Chain A, Crystal Structure Of The Phot-lov1 Domain From
Chlamydomonas Reinhardtii In The Dark State.
pdb|1N9N|A Chain A, Crystal Structure Of The Phot-Lov1 Domain From
Chlamydomonas Reinhardtii In Illuminated State. Data Set
Of A Single Crystal.
pdb|1N9O|A Chain A, Crystal Structure Of The Phot-Lov1 Domain From
Chlamydomonas Reinhardtii In Illuminated State.
Composite Data Set
Length = 109
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 42/147 (28%)
Query: 76 IEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCST 135
+ FV+ D +PD P+++AS+ F +T Y +E+LG NC FL+
Sbjct: 2 LRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGE-------------- 47
Query: 136 YTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGK 195
+D V KIRDA+++ +V+L+NY K G
Sbjct: 48 ----------------------------GTDPKEVQKIRDAIKKGEACSVRLLNYRKDGT 79
Query: 196 KFWNLFHLQPMRDHKGELQYFIGVQLD 222
FWNL + P++ G + F+GVQ+D
Sbjct: 80 PFWNLLTVTPIKTPDGRVSKFVGVQVD 106
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + A+K + K+ + H+ E EI S L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 120
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + DF S
Sbjct: 121 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 152
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 125
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + +F S
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIANFGWS 157
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
L F+ +PLG G G+V+L + + + A+K + K+ + H+ E EI S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + LY F +T + LI ++ P G ++ L K + F E Y E+ L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 126
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H +I+RD+KPEN+LL G + + +F S
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIANFGWS 158
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
+G G G V + +G A K + K + V R E EIM LDHP + LY
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+F+ +T I L+ + C GGELF + + ++FRE A +V+ + Y H L + +RD
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLNVAHRD 131
Query: 434 LKPENILL---QKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKWLTGYF 485
LKPEN L D + L DF L+ KP V Y++ + L G +
Sbjct: 132 LKPENFLFLTDSPDSPLKLIDFGLA--ARFKPGKMMRTKVGTPYYVSPQVLEGLY 184
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
+G G G V + +G A K + K + V R E EIM LDHP + LY
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+F+ +T I L+ + C GGELF + + ++FRE A +V+ + Y H L + +RD
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLNVAHRD 148
Query: 434 LKPENILL---QKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKWLTGYF 485
LKPEN L D + L DF L+ KP V Y++ + L G +
Sbjct: 149 LKPENFLFLTDSPDSPLKLIDFGLA--ARFKPGKMMRTKVGTPYYVSPQVLEGLY 201
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
K + F ++PLG G G+V+L + + A+K + KS + H+ E EI S
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
L HP + +Y F I L+ +F P GEL+ L K F E + + E+ L
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADAL 127
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y H +I+RD+KPEN+L+ G + + DF S
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|2PR5|A Chain A, Structural Basis For Light-dependent Signaling In The
Dimeric Lov Photosensor Ytva (dark Structure)
pdb|2PR5|B Chain B, Structural Basis For Light-dependent Signaling In The
Dimeric Lov Photosensor Ytva (dark Structure)
pdb|2PR6|A Chain A, Structural Basis For Light-dependent Signaling In The
Dimeric Lov Photosensor Ytva (light Structure)
pdb|2PR6|B Chain B, Structural Basis For Light-dependent Signaling In The
Dimeric Lov Photosensor Ytva (light Structure)
Length = 132
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 44/150 (29%)
Query: 73 LERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRN 132
L+ + VITDP + DNPI++ + F+++T Y EEILG+NC FL+ G++
Sbjct: 5 LDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQ----------GKH 54
Query: 133 CSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTK 192
+D A V IR A++ + +TVQ+ NY K
Sbjct: 55 --------------------------------TDPAEVDNIRTALQNKEPVTVQIQNYKK 82
Query: 193 SGKKFWNLFHLQPMRDHKGELQYFIGVQLD 222
G FWN ++ PM + YF+G+Q D
Sbjct: 83 DGTMFWNELNIDPMEIE--DKTYFVGIQND 110
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
++ +G G G LV+ G Y +K + S M ++ + + E +++ + HP +
Sbjct: 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKER-EESRREVAVLANMKHPNIVQ 87
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
SF+ + + ++ D+C GG+LF ++ Q +F+ED + ++ + L+++H I+
Sbjct: 88 YRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKIL 147
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RD+K +NI L KDG V L DF ++
Sbjct: 148 HRDIKSQNIFLTKDGTVQLGDFGIA 172
>pdb|2Z6C|A Chain A, Crystal Structure Of Lov1 Domain Of Phototropin1 From
Arabidopsis Thaliana
pdb|2Z6C|B Chain B, Crystal Structure Of Lov1 Domain Of Phototropin1 From
Arabidopsis Thaliana
Length = 129
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 42/164 (25%)
Query: 68 DLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREE 127
DL L ++ FV++D PD PI++AS F +T YT +E
Sbjct: 8 DLKDALSTFQQTFVVSDATKPDYPIMYAS------------------AGFFNMTGYTSKE 49
Query: 128 ILGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQL 187
++GRNC F G +D ++KIR+ + ++
Sbjct: 50 VVGRNC--------------------RFLQGS----GTDADELAKIRETLAAGNNYCGRI 85
Query: 188 INYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLR 231
+NY K G FWNL + P++D G++ FIG+Q++ S H E +
Sbjct: 86 LNYKKDGTSFWNLLTIAPIKDESGKVLKFIGMQVEVSKHTEGAK 129
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTL 371
+PLG G G+V+L + + A+K + KS + H+ E EI S L HP + +
Sbjct: 21 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
Y F I L+ +F P GEL+ L K F E + + E+ L Y H +I+
Sbjct: 81 YNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCHERKVIH 138
Query: 432 RDLKPENILLQKDGHVVLTDFDLS 455
RD+KPEN+L+ G + + DF S
Sbjct: 139 RDIKPENLLMGYKGELKIADFGWS 162
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTL 371
+PLG G G+V+L + + A+K + KS + H+ E EI S L HP + +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
Y F I L+ +F P GEL+ L K F E + + E+ L Y H +I+
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCHERKVIH 137
Query: 432 RDLKPENILLQKDGHVVLTDFDLS 455
RD+KPEN+L+ G + + DF S
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWS 161
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN-RNKVHRACIERE--IMSLL 363
H++ + LG G V +G G+ YA K ++K + + R V R IERE I+ +
Sbjct: 27 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI 86
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + TL+ F+ T + LI + GGELF L ++ + ED A + +++ G+ Y
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHY 144
Query: 424 LHCLGIIYRDLKPENILL 441
LH I + DLKPENI+L
Sbjct: 145 LHSKRIAHFDLKPENIML 162
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 298 GSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIER 357
GS E+ + +++ +K +G G+ V L G A+K ++K+ LN + + E
Sbjct: 4 GSDEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKT-QLNPTSLQKLFREV 62
Query: 358 EIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEV 417
IM +L+HP + L+ +T + LI ++ GGE+F L +E AR ++
Sbjct: 63 RIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQI 120
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
V ++Y H I++RDLK EN+LL D ++ + DF S
Sbjct: 121 VSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN-RNKVHRACIEREIMSL--L 363
H++ + LG G V +G G+ YA K ++K + + R V R IERE+ L +
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + TL+ F+ T + LI + GGELF L ++ + ED A + +++ G+ Y
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHY 123
Query: 424 LHCLGIIYRDLKPENILL 441
LH I + DLKPENI+L
Sbjct: 124 LHSKRIAHFDLKPENIML 141
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN-RNKVHRACIERE--IMSLL 363
H++ + LG G V +G G+ YA K ++K + + R V R IERE I+ +
Sbjct: 13 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 72
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
HP + TL+ F+ T + LI + GGELF L ++ + ED A + +++ G+ Y
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHY 130
Query: 424 LHCLGIIYRDLKPENILL 441
LH I + DLKPENI+L
Sbjct: 131 LHSKRIAHFDLKPENIML 148
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 9/160 (5%)
Query: 298 GSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIER 357
G IG +++ +K LG G G V L G+ A+K + K V+ + R IER
Sbjct: 8 ADGAHIG--NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IER 63
Query: 358 EI--MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
EI + LL HP + LY ++ I ++ ++ G ELF + Q K+ +++ RF+
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYI-VQRDKMSEQEARRFFQ- 120
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++ +EY H I++RDLKPEN+LL + +V + DF LS
Sbjct: 121 QIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 160
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 9/160 (5%)
Query: 298 GSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIER 357
G IG +++ +K LG G G V L G+ A+K + K V+ + R IER
Sbjct: 7 ADGAHIG--NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IER 62
Query: 358 EI--MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
EI + LL HP + LY ++ I ++ ++ G ELF + Q K+ +++ RF+
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYI-VQRDKMSEQEARRFFQ- 119
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++ +EY H I++RDLKPEN+LL + +V + DF LS
Sbjct: 120 QIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 159
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T + E+ + +++ +K +G G+ V L G+ A+K ++K+ LN + + + E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFRE 63
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
IM +L+HP + L+ +T + L+ ++ GGE+F L +E AR +
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQ 121
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V ++Y H I++RDLK EN+LL D ++ + DF S
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T + E+ + +++ +K +G G+ V L G+ A+K ++K+ LN + + + E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFRE 63
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
IM +L+HP + L+ +T + L+ ++ GGE+F L +E AR +
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQ 121
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V ++Y H I++RDLK EN+LL D ++ + DF S
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T + E+ + +++ +K +G G+ V L G+ A+K ++K+ LN + + + E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFRE 63
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
IM +L+HP + L+ +T + L+ ++ GGE+F L +E AR +
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQ 121
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V ++Y H I++RDLK EN+LL D ++ + DF S
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%), Gaps = 8/147 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G V LV+ + G+L+A+K ++KS + + E ++ + H + TL
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN---EIAVLKKIKHENIVTLED 73
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
++++TH L+ GGELF + ++ ++ E A +V+ ++YLH GI++RD
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENGIVHRD 131
Query: 434 LKPENILL---QKDGHVVLTDFDLSFM 457
LKPEN+L +++ +++TDF LS M
Sbjct: 132 LKPENLLYLTPEENSKIMITDFGLSKM 158
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 81/145 (55%), Gaps = 9/145 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI--MSLLDHPFLPTL 371
LG G G V L + A+K + + +L ++ +H +EREI + LL HP + L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQ-LLKKSDMHMR-VEREISYLKLLRHPHIIKL 74
Query: 372 YASFQTSTHICLITDFCPGGELFA-LLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
Y T T I ++ ++ GGELF +++K+ M ED R + +++ +EY H I+
Sbjct: 75 YDVITTPTDIVMVIEYA-GGELFDYIVEKKRMT---EDEGRRFFQQIICAIEYCHRHKIV 130
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDLKPEN+LL + +V + DF LS
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLS 155
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 9/160 (5%)
Query: 298 GSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIER 357
G IG +++ +K LG G G V L G+ A+K + K V+ + R IER
Sbjct: 2 ADGAHIG--NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IER 57
Query: 358 EI--MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
EI + LL HP + LY ++ I ++ ++ G ELF + Q K+ +++ RF+
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYI-VQRDKMSEQEARRFFQ- 114
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++ +EY H I++RDLKPEN+LL + +V + DF LS
Sbjct: 115 QIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 154
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T + E+ + +++ +K +G G+ V L G+ A++ ++K+ LN + + + E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKT-QLNSSSLQKLFRE 63
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
IM +L+HP + L+ +T + L+ ++ GGE+F L +E AR +
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQ 121
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V ++Y H I++RDLK EN+LL D ++ + DF S
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T + E+ + +++ +K +G G+ V L G+ A++ ++K+ LN + + + E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKT-QLNSSSLQKLFRE 63
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
IM +L+HP + L+ +T + L+ ++ GGE+F L +E AR +
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQ 121
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V ++Y H I++RDLK EN+LL D ++ + DF S
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 7/151 (4%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI--MSLLD 364
+++ +K LG G G V L G+ A+K + K V+ + R IEREI + LL
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYLRLLR 62
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + LY ++ I ++ ++ G ELF + ++ E AR + +++ +EY
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDK--MSEQEARRFFQQIISAVEYC 119
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H I++RDLKPEN+LL + +V + DF LS
Sbjct: 120 HRHKIVHRDLKPENLLLDEHLNVKIADFGLS 150
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 5/151 (3%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
+K + LG G G V L + + G+ A+K + K + + E +++ LDHP
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
+ LY F+ + L+ + GGELF + + K F E A +V+ G+ Y+H
Sbjct: 94 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKN 151
Query: 428 GIIYRDLKPENILLQ---KDGHVVLTDFDLS 455
I++RDLKPEN+LL+ KD ++ + DF LS
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLS 182
>pdb|3RH8|B Chain B, Crystal Structure Of The Light-State Dimer Of Fungal
Blue-Light Photoreceptor Vivid
pdb|3RH8|D Chain D, Crystal Structure Of The Light-State Dimer Of Fungal
Blue-Light Photoreceptor Vivid
Length = 148
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 31/143 (21%)
Query: 80 FVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFM 139
++ D + D PI++AS++FL +T Y+ E+LGRNC FL+ + + + ST ++
Sbjct: 37 LILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQ-----SPDGMVKPKSTRKYV 91
Query: 140 LYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWN 199
D T++ IR A+ E+ V+++N+ K+G++F N
Sbjct: 92 --------------------------DSNTINTIRKAIDRNAEVQVEVVNFKKNGQRFVN 125
Query: 200 LFHLQPMRDHKGELQYFIGVQLD 222
+ P+RD GE +Y +G Q +
Sbjct: 126 FLTIIPVRDETGEYRYSMGFQCE 148
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
T + E+ + +++ +K +G G+ V L G+ A+K ++K+ LN + + + E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFRE 63
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
I +L+HP + L+ +T + L+ ++ GGE+F L +E A+F +
Sbjct: 64 VRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF--RQ 121
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V ++Y H I++RDLK EN+LL D ++ + DF S
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|3HJK|A Chain A, 2.0 Angstrom Structure Of The Ile74val Variant Of Vivid
(Vvd).
pdb|3HJK|B Chain B, 2.0 Angstrom Structure Of The Ile74val Variant Of Vivid
(Vvd)
Length = 154
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 31/143 (21%)
Query: 80 FVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFM 139
V+ D + D PI++AS++FL +T Y+ E+LGRNC FL+ + + + ST ++
Sbjct: 41 LVLCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQ-----SPDGMVKPKSTRKYV 95
Query: 140 LYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWN 199
D T++ +R A+ E+ V+++N+ K+G++F N
Sbjct: 96 --------------------------DSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVN 129
Query: 200 LFHLQPMRDHKGELQYFIGVQLD 222
+ P+RD GE +Y +G Q +
Sbjct: 130 FLTMIPVRDETGEYRYSMGFQCE 152
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 5/151 (3%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
+K + LG G G V L + + G+ A+K + K + + E +++ LDHP
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
+ LY F+ + L+ + GGELF + + K F E A +V+ G+ Y+H
Sbjct: 88 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKN 145
Query: 428 GIIYRDLKPENILLQ---KDGHVVLTDFDLS 455
I++RDLKPEN+LL+ KD ++ + DF LS
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 7/152 (4%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
++ +K LG G G V L + + G A+K ++KS + + E ++ LDHP
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 368 LPTLYASFQTSTHICLITDFCPGGELF-ALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+ LY F+ + L+ + GGELF ++ +Q F E A +V+ G YLH
Sbjct: 66 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK---FSEVDAAVIMKQVLSGTTYLHK 122
Query: 427 LGIIYRDLKPENILLQ---KDGHVVLTDFDLS 455
I++RDLKPEN+LL+ +D + + DF LS
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 5/151 (3%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
+K + LG G G V L + + G+ A+K + K + + E +++ LDHP
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 110
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
+ LY F+ + L+ + GGELF + + K F E A +V+ G+ Y+H
Sbjct: 111 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKN 168
Query: 428 GIIYRDLKPENILLQ---KDGHVVLTDFDLS 455
I++RDLKPEN+LL+ KD ++ + DF LS
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLS 199
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 5/151 (3%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
+K + LG G G V L + + G+ A+K + K + + E +++ LDHP
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 111
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
+ LY F+ + L+ + GGELF + + K F E A +V+ G+ Y+H
Sbjct: 112 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKN 169
Query: 428 GIIYRDLKPENILLQ---KDGHVVLTDFDLS 455
I++RDLKPEN+LL+ KD ++ + DF LS
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLS 200
>pdb|3P7N|A Chain A, Crystal Structure Of Light Activated Transcription Factor
El222 From Erythrobacter Litoralis
pdb|3P7N|B Chain B, Crystal Structure Of Light Activated Transcription Factor
El222 From Erythrobacter Litoralis
Length = 258
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 42/145 (28%)
Query: 81 VITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFML 140
V++DPR+ DNP+I + +F +LT Y+ EE +GRNC FL T ++
Sbjct: 77 VVSDPRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLA------------GSGTEPWL- 123
Query: 141 YFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNL 200
KIR VRE + + V+++NY K G F N
Sbjct: 124 -----------------------------TDKIRQGVREHKPVLVEILNYKKDGTPFRNA 154
Query: 201 FHLQPMRDHKGELQYFIGVQLDGSD 225
+ P+ D EL YF+G Q++ D
Sbjct: 155 VLVAPIYDDDDELLYFLGSQVEVDD 179
>pdb|3HJI|A Chain A, 1.8 Angstrom Crystal Structure Of The I74v:i85v Variant Of
Vivid (Vvd).
pdb|3HJI|B Chain B, 1.8 Angstrom Crystal Structure Of The I74v:i85v Variant Of
Vivid (Vvd)
Length = 154
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 31/143 (21%)
Query: 80 FVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFM 139
V+ D + D P+++AS++FL +T Y+ E+LGRNC FL+ + + + ST ++
Sbjct: 41 LVLCDLKQKDTPVVYASEAFLYMTGYSNAEVLGRNCRFLQ-----SPDGMVKPKSTRKYV 95
Query: 140 LYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWN 199
D T++ +R A+ E+ V+++N+ K+G++F N
Sbjct: 96 --------------------------DSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVN 129
Query: 200 LFHLQPMRDHKGELQYFIGVQLD 222
+ P+RD GE +Y +G Q +
Sbjct: 130 FLTMIPVRDETGEYRYSMGFQCE 152
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 5/151 (3%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
+K + LG G G V L + + G+ A+K + K + + E +++ LDHP
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
+ LY F+ + L+ + GGELF + + K F E A +V+ G+ Y H
Sbjct: 88 IXKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYXHKN 145
Query: 428 GIIYRDLKPENILLQ---KDGHVVLTDFDLS 455
I++RDLKPEN+LL+ KD ++ + DF LS
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 7/152 (4%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
++ +K LG G G V L + + G A+K ++KS + + E ++ LDHP
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 82
Query: 368 LPTLYASFQTSTHICLITDFCPGGELF-ALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+ LY F+ + L+ + GGELF ++ +Q F E A +V+ G YLH
Sbjct: 83 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK---FSEVDAAVIMKQVLSGTTYLHK 139
Query: 427 LGIIYRDLKPENILLQ---KDGHVVLTDFDLS 455
I++RDLKPEN+LL+ +D + + DF LS
Sbjct: 140 HNIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 10/164 (6%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI--MSL 362
L H+ + LG G G VH V + G +A K ++ ++ + + +EI MS+
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAK-----FVMTPHESDKETVRKEIQTMSV 104
Query: 363 LDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLE 422
L HP L L+ +F+ + +I +F GGELF + + K+ ED A Y +V GL
Sbjct: 105 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKM-SEDEAVEYMRQVCKGLC 163
Query: 423 YLHCLGIIYRDLKPENILL--QKDGHVVLTDFDLSFMTSCKPQV 464
++H ++ DLKPENI+ ++ + L DF L+ K V
Sbjct: 164 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 207
>pdb|3IS2|B Chain B, 2.3 Angstrom Crystal Structure Of A Cys71 Sulfenic Acid
Form Of Vivid
Length = 154
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 31/143 (21%)
Query: 80 FVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFM 139
++ D + D PI++AS++FL +T Y+ E+LGRNC FL+ + + + ST ++
Sbjct: 41 LILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQ-----SPDGMVKPKSTRKYV 95
Query: 140 LYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWN 199
D T++ +R A+ E+ V+++N+ K+G++F N
Sbjct: 96 --------------------------DSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVN 129
Query: 200 LFHLQPMRDHKGELQYFIGVQLD 222
+ P+RD GE +Y +G Q +
Sbjct: 130 FLTMIPVRDETGEYRYSMGFQCE 152
>pdb|3D72|A Chain A, 1.65 Angstrom Crystal Structure Of The Cys71val Variant In
The Fungal Photoreceptor Vvd
pdb|3D72|B Chain B, 1.65 Angstrom Crystal Structure Of The Cys71val Variant In
The Fungal Photoreceptor Vvd
Length = 149
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 31/143 (21%)
Query: 80 FVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFM 139
++ D + D PI++AS++FL +T Y+ E+LGRNC FL+ + + + ST ++
Sbjct: 38 LILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQ-----SPDGMVKPKSTRKYV 92
Query: 140 LYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWN 199
D T++ +R A+ E+ V+++N+ K+G++F N
Sbjct: 93 --------------------------DSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVN 126
Query: 200 LFHLQPMRDHKGELQYFIGVQLD 222
+ P+RD GE +Y +G Q +
Sbjct: 127 FLTMIPVRDETGEYRYSMGFQCE 149
>pdb|3IS2|A Chain A, 2.3 Angstrom Crystal Structure Of A Cys71 Sulfenic Acid
Form Of Vivid
Length = 154
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 31/143 (21%)
Query: 80 FVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFM 139
++ D + D PI++AS++FL +T Y+ E+LGRNC FL+ + + + ST ++
Sbjct: 41 LILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQ-----SPDGMVKPKSTRKYV 95
Query: 140 LYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWN 199
D T++ +R A+ E+ V+++N+ K+G++F N
Sbjct: 96 --------------------------DSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVN 129
Query: 200 LFHLQPMRDHKGELQYFIGVQLD 222
+ P+RD GE +Y +G Q +
Sbjct: 130 FLTMIPVRDETGEYRYSMGFQCE 152
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 10/136 (7%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS--LLDH 365
++ +K +G G+ G L+ + A EL A+K +E+ ++ N ++REI++ L H
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDEN------VKREIINHRSLRH 74
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH 425
P + T TH+ ++ ++ GGELF + F ED ARF+ +++ G+ Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYAH 132
Query: 426 CLGIIYRDLKPENILL 441
+ + +RDLK EN LL
Sbjct: 133 AMQVAHRDLKLENTLL 148
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHP 366
+++ +K +G G+ V L G+ A+K ++K+ LN + + + E IM +L+HP
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFREVRIMKVLNHP 66
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+ L+ +T + L+ ++ GGE+F L +E AR ++V ++Y H
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGW--MKEKEARAKFRQIVSAVQYCHQ 124
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I++RDLK EN+LL D ++ + DF S
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|2PD7|A Chain A, 2.0 Angstrom Crystal Structure Of The Fungal Blue-Light
Photoreceptor Vivid
pdb|2PD7|B Chain B, 2.0 Angstrom Crystal Structure Of The Fungal Blue-Light
Photoreceptor Vivid
pdb|2PDR|A Chain A, 1.7 Angstrom Crystal Structure Of The Photo-excited Blue-
Light Photoreceptor Vivid
pdb|2PDR|B Chain B, 1.7 Angstrom Crystal Structure Of The Photo-excited Blue-
Light Photoreceptor Vivid
pdb|2PDR|C Chain C, 1.7 Angstrom Crystal Structure Of The Photo-excited Blue-
Light Photoreceptor Vivid
pdb|2PDR|D Chain D, 1.7 Angstrom Crystal Structure Of The Photo-excited Blue-
Light Photoreceptor Vivid
pdb|2PDT|A Chain A, 2.3 Angstrom Structure Of Phosphodiesterase Treated Vivid
pdb|2PDT|B Chain B, 2.3 Angstrom Structure Of Phosphodiesterase Treated Vivid
pdb|2PDT|C Chain C, 2.3 Angstrom Structure Of Phosphodiesterase Treated Vivid
pdb|2PDT|D Chain D, 2.3 Angstrom Structure Of Phosphodiesterase Treated Vivid
Length = 149
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 31/143 (21%)
Query: 80 FVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFM 139
++ D + D PI++AS++FL +T Y+ E+LGRNC FL+ + + + ST ++
Sbjct: 38 LILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQ-----SPDGMVKPKSTRKYV 92
Query: 140 LYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWN 199
D T++ +R A+ E+ V+++N+ K+G++F N
Sbjct: 93 --------------------------DSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVN 126
Query: 200 LFHLQPMRDHKGELQYFIGVQLD 222
+ P+RD GE +Y +G Q +
Sbjct: 127 FLTMIPVRDETGEYRYSMGFQCE 149
>pdb|2PD8|A Chain A, 1.8 Angstrom Crystal Structure Of The Cys71ser Mutant Of
Vivid
pdb|2PD8|B Chain B, 1.8 Angstrom Crystal Structure Of The Cys71ser Mutant Of
Vivid
Length = 149
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 31/143 (21%)
Query: 80 FVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFM 139
++ D + D PI++AS++FL +T Y+ E+LGRNC FL+ + + + ST ++
Sbjct: 38 LILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQ-----SPDGMVKPKSTRKYV 92
Query: 140 LYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWN 199
D T++ +R A+ E+ V+++N+ K+G++F N
Sbjct: 93 --------------------------DSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVN 126
Query: 200 LFHLQPMRDHKGELQYFIGVQLD 222
+ P+RD GE +Y +G Q +
Sbjct: 127 FLTMIPVRDETGEYRYSMGFQCE 149
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 5/166 (3%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +++ +K +G G+ V L G A+K ++K+ LN + + E IM +L+
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKT-QLNPTSLQKLFREVRIMKILN 72
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L+ +T + LI ++ GGE+F L +E AR ++V ++Y
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYC 130
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS--FMTSCKPQVFYHA 468
H I++RDLK EN+LL D ++ + DF S F K F A
Sbjct: 131 HQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGA 176
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 27/202 (13%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI--MSL 362
L H+ + LG G G VH V + G +A K ++ ++ + + +EI MS+
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAK-----FVMTPHESDKETVRKEIQTMSV 210
Query: 363 LDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLE 422
L HP L L+ +F+ + +I +F GGELF + + K+ ED A Y +V GL
Sbjct: 211 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKM-SEDEAVEYMRQVCKGLC 269
Query: 423 YLHCLGIIYRDLKPENILL--QKDGHVVLTDFDLSFMTSCK--------------PQVFY 466
++H ++ DLKPENI+ ++ + L DF L+ K P+V
Sbjct: 270 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAE 329
Query: 467 HAHVNGFYFIMYKWLTGYFTYV 488
V G+Y M W G +Y+
Sbjct: 330 GKPV-GYYTDM--WSVGVLSYI 348
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 28/182 (15%)
Query: 299 SGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN------------ 346
SG+ + L+ + +G G G V L + YAMK + K ++
Sbjct: 6 SGDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRG 65
Query: 347 -----------RNKVHRACIEREIMSLLDHPFLPTLYASFQ--TSTHICLITDFCPGGEL 393
R + + E I+ LDHP + L H+ ++ + G +
Sbjct: 66 TRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV 125
Query: 394 FALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFD 453
+ +P+ ED ARFY +++ G+EYLH II+RD+KP N+L+ +DGH+ + DF
Sbjct: 126 MEVPTLKPLS---EDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFG 182
Query: 454 LS 455
+S
Sbjct: 183 VS 184
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 18/168 (10%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVML-------NRN--KVHR 352
KIG +FK ++ LG G G V L + + A+K ++KS N+N K H
Sbjct: 33 KIGESYFK-VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHE 91
Query: 353 ACI-EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELF-ALLDKQPMKIFREDSA 410
E ++ LDHP + L+ F+ + L+T+F GGELF ++++ F E A
Sbjct: 92 EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK---FDECDA 148
Query: 411 RFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG---HVVLTDFDLS 455
+++ G+ YLH I++RD+KPENILL+ ++ + DF LS
Sbjct: 149 ANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + + + YA+K + K+ N++ E E++ LDHP + L+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLKKLDHPNIMKLFE 88
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ S+ ++ + GGELF + K+ K F E A +V G+ Y+H I++RD
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 434 LKPENILL---QKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKWLTGYF 485
LKPENILL +KD + + DF LS T + + Y+I + L G +
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLS--TCFQQNTKMKDRIGTAYYIAPEVLRGTY 199
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 3/159 (1%)
Query: 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE 356
+ + E+ + +++ K +G G+ V L G A+K ++K+ LN + + E
Sbjct: 6 SATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKT-QLNPTSLQKLFRE 64
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
IM +L+HP + L+ +T + L+ ++ GGE+F L +E AR +
Sbjct: 65 VRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQ 122
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V ++Y H I++RDLK EN+LL D ++ + DF S
Sbjct: 123 IVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L +++ + +G G V L GE+ A+K M+K+ + + + R E E + L
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIEALKNLR 66
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
H + LY +T+ I ++ ++CPGGELF + Q E+ R ++V + Y+
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVSAVAYV 124
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
H G +RDLKPEN+L + + L DF L
Sbjct: 125 HSQGYAHRDLKPENLLFDEYHKLKLIDFGL 154
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL--LDHPFLPTL 371
LG G V L E + G+L+A+K + K + K + IE EI L + H + L
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKAL----KGKESSIENEIAVLRKIKHENIVAL 85
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
+++ H+ L+ GGELF + ++ + E A +V+ + YLH +GI++
Sbjct: 86 EDIYESPNHLYLVMQLVSGGELFDRIVEKGF--YTEKDASTLIRQVLDAVYYLHRMGIVH 143
Query: 432 RDLKPENILL---QKDGHVVLTDFDLSFM 457
RDLKPEN+L ++ ++++DF LS M
Sbjct: 144 RDLKPENLLYYSQDEESKIMISDFGLSKM 172
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL--LDHPFLPTL 371
LG G V L E + +L A+K + K + + +E EI L + HP + L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK----EGSMENEIAVLHKIKHPNIVAL 81
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
+++ H+ LI GGELF + ++ R+ S + +V+ ++YLH LGI++
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF--QVLDAVKYLHDLGIVH 139
Query: 432 RDLKPENIL---LQKDGHVVLTDFDLSFM 457
RDLKPEN+L L +D ++++DF LS M
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL--LDHPFLPTL 371
LG G V L E + +L A+K + K + + +E EI L + HP + L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK----EGSMENEIAVLHKIKHPNIVAL 81
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
+++ H+ LI GGELF + ++ R+ S + +V+ ++YLH LGI++
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF--QVLDAVKYLHDLGIVH 139
Query: 432 RDLKPENIL---LQKDGHVVLTDFDLSFM 457
RDLKPEN+L L +D ++++DF LS M
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL--LDHPFLPTL 371
LG G V L E + +L A+K + K + + +E EI L + HP + L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGK----EGSMENEIAVLHKIKHPNIVAL 81
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
+++ H+ LI GGELF + ++ R+ S + +V+ ++YLH LGI++
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF--QVLDAVKYLHDLGIVH 139
Query: 432 RDLKPENIL---LQKDGHVVLTDFDLSFM 457
RDLKPEN+L L +D ++++DF LS M
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 10/136 (7%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS--LLDH 365
++ +K +G G+ G L+ + + EL A+K +E+ ++ N ++REI++ L H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN------VKREIINHRSLRH 74
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH 425
P + T TH+ ++ ++ GGELF + F ED ARF+ +++ G+ Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCH 132
Query: 426 CLGIIYRDLKPENILL 441
+ + +RDLK EN LL
Sbjct: 133 AMQVCHRDLKLENTLL 148
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 10/136 (7%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS--LLDH 365
++ +K +G G+ G L+ + + EL A+K +E+ ++ N ++REI++ L H
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN------VKREIINHRSLRH 73
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH 425
P + T TH+ ++ ++ GGELF + F ED ARF+ +++ G+ Y H
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCH 131
Query: 426 CLGIIYRDLKPENILL 441
+ + +RDLK EN LL
Sbjct: 132 AMQVCHRDLKLENTLL 147
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 10/136 (7%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS--LLDH 365
++ +K +G G+ G L+ + + EL A+K +E+ ++ N ++REI++ L H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN------VKREIINHRSLRH 74
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH 425
P + T TH+ ++ ++ GGELF + F ED ARF+ +++ G+ Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCH 132
Query: 426 CLGIIYRDLKPENILL 441
+ + +RDLK EN LL
Sbjct: 133 AMQVCHRDLKLENTLL 148
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + + + YA+K + K+ N++ E E++ LDHP + L+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLKKLDHPNIMKLFE 88
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ S+ ++ + GGELF + K+ K F E A +V G+ Y+H I++RD
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 434 LKPENILL---QKDGHVVLTDFDLS 455
LKPENILL +KD + + DF LS
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLS 171
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHR----ACIER 357
++ + H+ LG G G V + E Q G A+K +LNR K+ I+R
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK------ILNRQKIRSLDVVGKIKR 60
Query: 358 EI--MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
EI + L HP + LY T T ++ ++ GGELF + K E AR
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQ 118
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459
+++ ++Y H +++RDLKPEN+LL + + DF LS M S
Sbjct: 119 QILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHR----ACIER 357
++ + H+ LG G G V + E Q G A+K +LNR K+ I+R
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK------ILNRQKIRSLDVVGKIKR 60
Query: 358 EI--MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
EI + L HP + LY T T ++ ++ GGELF + K E AR
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQ 118
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459
+++ ++Y H +++RDLKPEN+LL + + DF LS M S
Sbjct: 119 QILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + + + YA+K + K+ N++ E E++ LDHP + L+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLKKLDHPNIMKLFE 88
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ S+ ++ + GGELF + K+ K F E A +V G+ Y+H I++RD
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 434 LKPENILL---QKDGHVVLTDFDLS 455
LKPENILL +KD + + DF LS
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLS 171
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHR----ACIER 357
++ + H+ LG G G V + + + G A+K +LNR K+ I R
Sbjct: 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVK------ILNRQKIRSLDVVGKIRR 65
Query: 358 EI--MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
EI + L HP + LY T + I ++ ++ GGELF + K ++ ++S R +
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQ- 123
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459
+++ G++Y H +++RDLKPEN+LL + + DF LS M S
Sbjct: 124 QILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKS-VMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + HP + T
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH L I
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIA 135
Query: 431 YRDLKPENILL 441
+ DLKPENI+L
Sbjct: 136 HFDLKPENIML 146
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKS-VMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + HP + T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH L I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 431 YRDLKPENILL 441
+ DLKPENI+L
Sbjct: 137 HFDLKPENIML 147
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKS-VMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + HP + T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH L I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 431 YRDLKPENILL 441
+ DLKPENI+L
Sbjct: 137 HFDLKPENIML 147
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKS-VMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + HP + T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH L I
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 431 YRDLKPENILL 441
+ DLKPENI+L
Sbjct: 137 HFDLKPENIML 147
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKS-VMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + HP + T
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH L I
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIA 135
Query: 431 YRDLKPENILL 441
+ DLKPENI+L
Sbjct: 136 HFDLKPENIML 146
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKS-VMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + HP + T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH L I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 431 YRDLKPENILL 441
+ DLKPENI+L
Sbjct: 137 HFDLKPENIML 147
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL--LDHPFLPTL 371
LG G V L E + +L A+K + K + + +E EI L + HP + L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK----EGSMENEIAVLHKIKHPNIVAL 81
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
+++ H+ LI GGELF + ++ R+ S + +V+ ++YLH LGI++
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF--QVLDAVKYLHDLGIVH 139
Query: 432 RDLKPENIL---LQKDGHVVLTDFDLSFM 457
RDLKPEN+L L +D ++++DF LS M
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKS-VMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + HP + T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH L I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 431 YRDLKPENILL 441
+ DLKPENI+L
Sbjct: 137 HFDLKPENIML 147
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKS-VMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + HP + T
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH L I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 431 YRDLKPENILL 441
+ DLKPENI+L
Sbjct: 137 HFDLKPENIML 147
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKS-VMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + HP + T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH L I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 431 YRDLKPENILL 441
+ DLKPENI+L
Sbjct: 137 HFDLKPENIML 147
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKS-VMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + HP + T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH L I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 431 YRDLKPENILL 441
+ DLKPENI+L
Sbjct: 137 HFDLKPENIML 147
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 80/152 (52%), Gaps = 8/152 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEK-SVMLNRNKVHRACIEREIMSLLDHP 366
++ +K LG G G V L + A+K + K SV + N + E ++ LLDHP
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSN--SKLLEEVAVLKLLDHP 96
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+ LY F+ + L+ + GGELF + + MK F E A +V+ G+ YLH
Sbjct: 97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHR-MK-FNEVDAAVIIKQVLSGVTYLHK 154
Query: 427 LGIIYRDLKPENILL---QKDGHVVLTDFDLS 455
I++RDLKPEN+LL +KD + + DF LS
Sbjct: 155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKS-VMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + HP + T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH L I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 431 YRDLKPENILL 441
+ DLKPENI+L
Sbjct: 137 HFDLKPENIML 147
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKS-VMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + HP + T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH L I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 431 YRDLKPENILL 441
+ DLKPENI+L
Sbjct: 137 HFDLKPENIML 147
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKS-VMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + HP + T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH L I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 431 YRDLKPENILL 441
+ DLKPENI+L
Sbjct: 137 HFDLKPENIML 147
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEK-SVMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + HP + T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH I
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 431 YRDLKPENILLQKDG----HVVLTDFDLS 455
+ DLKPENI+L H+ L DF L+
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 10/136 (7%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS--LLDH 365
++ +K +G G+ G L+ + + EL A+K +E+ + N ++REI++ L H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAAN------VKREIINHRSLRH 74
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH 425
P + T TH+ ++ ++ GGELF + F ED ARF+ +++ G+ Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCH 132
Query: 426 CLGIIYRDLKPENILL 441
+ + +RDLK EN LL
Sbjct: 133 AMQVCHRDLKLENTLL 148
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS--LLDHPFL 368
+K +G G+ G L+ + EL A+K +E+ ++ N ++REI++ L HP +
Sbjct: 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDEN------VQREIINHRSLRHPNI 78
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
T TH+ +I ++ GGEL+ + F ED ARF+ +++ G+ Y H +
Sbjct: 79 VRFKEVILTPTHLAIIMEYASGGELYERICNAGR--FSEDEARFFFQQLLSGVSYCHSMQ 136
Query: 429 IIYRDLKPENILL 441
I +RDLK EN LL
Sbjct: 137 ICHRDLKLENTLL 149
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKS-VMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + HP + T
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH L I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 431 YRDLKPENILL 441
+ DLKPENI+L
Sbjct: 137 HFDLKPENIML 147
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G VH E G A K ++ M ++ +V E +M+ LDH L LY
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKN---EISVMNQLDHANLIQLYD 153
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+F++ I L+ ++ GGELF + + + D+ F ++ G+ ++H + I++ D
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFM-KQICEGIRHMHQMYILHLD 212
Query: 434 LKPENIL-LQKDG-HVVLTDFDLS 455
LKPENIL + +D + + DF L+
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLA 236
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 296 ITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACI 355
I GS F+ LG G T V+ + +G + YA+K ++K+V K+ R
Sbjct: 43 IDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRT-- 97
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E ++ L HP + L F+T T I L+ + GGELF + ++ + E A
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEK--GYYSERDAADAVK 155
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQK---DGHVVLTDFDLS 455
+++ + YLH GI++RDLKPEN+L D + + DF LS
Sbjct: 156 QILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS 198
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ + + G L A K +E + ++ +E EI++ DHP++ L
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDHPYIVKLLG 83
Query: 374 SFQTSTHICLITDFCPGGELFAL---LDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
++ + ++ +FCPGG + A+ LD+ E + +++ L +LH II
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHSKRII 139
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDLK N+L+ +G + L DF +S
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ + + G L A K +E + ++ +E EI++ DHP++ L
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDHPYIVKLLG 75
Query: 374 SFQTSTHICLITDFCPGGELFAL---LDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
++ + ++ +FCPGG + A+ LD+ E + +++ L +LH II
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHSKRII 131
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDLK N+L+ +G + L DF +S
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVS 156
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI + +L+H +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK----MLNHENV 66
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 124
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI + +L+H +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK----MLNHENV 67
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 125
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI + +L+H +
Sbjct: 11 VQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK----MLNHENV 66
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 124
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI + +L+H +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK----MLNHENV 66
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 124
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEK-SVMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + H + T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH I
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 431 YRDLKPENILLQKDG----HVVLTDFDLS 455
+ DLKPENI+L H+ L DF L+
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI + +L+H +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK----MLNHENV 66
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 124
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEK-SVMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + H + T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH I
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 431 YRDLKPENILLQKDG----HVVLTDFDLS 455
+ DLKPENI+L H+ L DF L+
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI + +L+H +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK----MLNHENV 67
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 125
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI + +L+H +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK----MLNHENV 67
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 125
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI + +L+H +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK----MLNHENV 67
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 125
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI + +L+H +
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK----MLNHENV 65
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 123
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEK-SVMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + H + T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH I
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 431 YRDLKPENILLQKDG----HVVLTDFDLS 455
+ DLKPENI+L H+ L DF L+
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI + +L+H +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK----MLNHENV 66
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 124
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI + +L+H +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK----MLNHENV 66
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 124
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTL 371
+PLG G G+V+L + + + A+K + KS + H+ E EI + L HP + L
Sbjct: 29 RPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRL 88
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
Y F I LI ++ P GEL+ L K F E E+ L Y H +I+
Sbjct: 89 YNYFYDRRRIYLILEYAPRGELYKELQKS--CTFDEQRTATIMEELADALMYCHGKKVIH 146
Query: 432 RDLKPENILLQKDGHVVLTDFDLS 455
RD+KPEN+LL G + + DF S
Sbjct: 147 RDIKPENLLLGLKGELKIADFGWS 170
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEK-SVMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + H + T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH I
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 431 YRDLKPENILLQKDG----HVVLTDFDLS 455
+ DLKPENI+L H+ L DF L+
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEK-SVMLNRNKVHRACIERE--IMSLLDHPFLPT 370
LG G V + G YA K ++K +R V R IERE I+ + H + T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ ++ T + LI + GGELF L ++ + E+ A + +++ G+ YLH I
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 431 YRDLKPENILLQKDG----HVVLTDFDLS 455
+ DLKPENI+L H+ L DF L+
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI + +L+H +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK----MLNHENV 66
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 124
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI + +L+H +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK----MLNHENV 67
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 125
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 6/151 (3%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHP 366
++ ++ LG G G VH + G ++ K + L++ V E IM+ L HP
Sbjct: 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKN---EISIMNQLHHP 108
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
L L+ +F+ + LI +F GGELF + + K+ E Y + GL+++H
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKM-SEAEVINYMRQACEGLKHMHE 167
Query: 427 LGIIYRDLKPENILLQ--KDGHVVLTDFDLS 455
I++ D+KPENI+ + K V + DF L+
Sbjct: 168 HSIVHLDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI + +L+H +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK----MLNHENV 66
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 124
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI + +L+H +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK----MLNHENV 66
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 124
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI + +L+H +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK----MLNHENV 66
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 124
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI + +L+H +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK----MLNHENV 67
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 125
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
++ LG G G V L + E A+K M+++V N CI ++L+H +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN----AMLNHENV 67
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH +G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHGIG 125
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RD+KPEN+LL + ++ ++DF L+
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
F ++ LG G GSV+ + G++ A+K + + + E IM D P
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE-----SDLQEIIKEISIMQQCDSPH 85
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
+ Y S+ +T + ++ ++C G + ++ + K ED + GLEYLH +
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDII-RLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 428 GIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+RD+K NILL +GH L DF ++
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVA 172
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL--LDHPFLP 369
+ LG G G VHLVE + +G +K + K +R++V IE EI L LDHP +
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINK----DRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 370 TLYASFQTSTHICLITDFCPGGELFA-LLDKQPM-KIFREDSARFYAAEVVIGLEYLHCL 427
++ F+ ++ ++ + C GGEL ++ Q K E +++ L Y H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 428 GIIYRDLKPENILLQ 442
++++DLKPENIL Q
Sbjct: 144 HVVHKDLKPENILFQ 158
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD--HPFLPTL 371
+G G TG V + ++ +G+L A+K M+ R + R + E++ + D H + +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVEM 213
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
Y S+ + ++ +F GG L ++ M E+ V+ L LH G+I+
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHAQGVIH 270
Query: 432 RDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKWLTGYFTYVP 489
RD+K ++ILL DG V L+DF F +V + G + M L Y P
Sbjct: 271 RDIKSDSILLTHDGRVKLSDF--GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 326
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 12/149 (8%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIM--SLLDHP 366
++ LG G G V L + E A+K M+++V N I++EI +L+H
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN------IKKEIXINKMLNHE 64
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+ Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHG 122
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+GI +RD+KPEN+LL + ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 12/149 (8%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIM--SLLDHP 366
++ LG G G V L + E A+K M+++V N I++EI +L+H
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN------IKKEIXINKMLNHE 65
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+ Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHG 123
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+GI +RD+KPEN+LL + ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 330 AGELYAMKAMEKSVMLNRN--KVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDF 387
AG+ YA K + + R+ K+ R E I LL HP + L+ S H LI D
Sbjct: 46 AGQEYAAKIINTKKLSARDHQKLER---EARICRLLKHPNIVRLHDSISEEGHHYLIFDL 102
Query: 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQ---KD 444
GGELF D + + E A +++ + + H +G+++RDLKPEN+LL K
Sbjct: 103 VTGGELFE--DIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKG 160
Query: 445 GHVVLTDFDLSFMTSCKPQVFY 466
V L DF L+ + Q ++
Sbjct: 161 AAVKLADFGLAIEVEGEQQAWF 182
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 12/149 (8%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIM--SLLDHP 366
++ LG G G V L + E A+K M+++V N I++EI +L+H
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN------IKKEIXINKMLNHE 64
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+ Y + L ++C GGELF ++ + + D+ RF+ +++ G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFH-QLMAGVVYLHG 122
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+GI +RD+KPEN+LL + ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD--HPFLPTL 371
+G G TG V + ++ +G+L A+K M+ R + R + E++ + D H + +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVEM 93
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
Y S+ + ++ +F GG L ++ M E+ V+ L LH G+I+
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHAQGVIH 150
Query: 432 RDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKWLTGYFTYVP 489
RD+K ++ILL DG V L+DF F +V + G + M L Y P
Sbjct: 151 RDIKSDSILLTHDGRVKLSDF--GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 206
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD--HPFLPTL 371
+G G TG V + ++ +G+L A+K M+ R + R + E++ + D H + +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVEM 91
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
Y S+ + ++ +F GG L ++ M E+ V+ L LH G+I+
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHAQGVIH 148
Query: 432 RDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKWLTGYFTYVP 489
RD+K ++ILL DG V L+DF F +V + G + M L Y P
Sbjct: 149 RDIKSDSILLTHDGRVKLSDF--GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 204
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD--HPFLPTL 371
+G G TG V + ++ +G+L A+K M+ R + R + E++ + D H + +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVEM 136
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
Y S+ + ++ +F GG L ++ M E+ V+ L LH G+I+
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHAQGVIH 193
Query: 432 RDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKWLTGYFTYVP 489
RD+K ++ILL DG V L+DF F +V + G + M L Y P
Sbjct: 194 RDIKSDSILLTHDGRVKLSDF--GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 249
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
I LG G G V+ + + L A K ++ + ++ +E +I++ DHP +
Sbjct: 42 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVK 98
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L +F ++ ++ +FC GG + A++ + + E + + + L YLH II
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDLK NIL DG + L DF +S
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
I LG G G V+ + + L A K ++ + ++ +E +I++ DHP +
Sbjct: 42 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVK 98
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L +F ++ ++ +FC GG + A++ + + E + + + L YLH II
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDLK NIL DG + L DF +S
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
I LG G G V+ + + L A K ++ + ++ +E +I++ DHP +
Sbjct: 42 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVK 98
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L +F ++ ++ +FC GG + A++ + + E + + + L YLH II
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDLK NIL DG + L DF +S
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD--HPFLPTL 371
+G G TG V + ++ +G+L A+K M+ R + R + E++ + D H + +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVEM 82
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
Y S+ + ++ +F GG L ++ M E+ V+ L LH G+I+
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHAQGVIH 139
Query: 432 RDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKWLTGYFTYVP 489
RD+K ++ILL DG V L+DF F +V + G + M L Y P
Sbjct: 140 RDIKSDSILLTHDGRVKLSDF--GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 195
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD--HPFLPTL 371
+G G TG V + ++ +G+L A+K M+ R + R + E++ + D H + +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVEM 86
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
Y S+ + ++ +F GG L ++ M E+ V+ L LH G+I+
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHAQGVIH 143
Query: 432 RDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKWLTGYFTYVP 489
RD+K ++ILL DG V L+DF F +V + G + M L Y P
Sbjct: 144 RDIKSDSILLTHDGRVKLSDF--GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 199
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV-MLNRNKVH--RACIERE---IMS 361
+ P +G G + V + G +A+K ME + L+ ++ R RE +
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
+ HP + TL S+++S+ + L+ D GELF L ++ E R ++ +
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAV 213
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+LH I++RDLKPENILL + + L+DF S
Sbjct: 214 SFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS 247
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 317 GDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQ 376
GD G V+ + + L A K ++ + ++ +E +I++ DHP + L +F
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 377 TSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKP 436
++ ++ +FC GG + A++ + + E + + + L YLH II+RDLK
Sbjct: 78 YENNLWILIEFCAGGAVDAVM-LELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 136
Query: 437 ENILLQKDGHVVLTDFDLS 455
NIL DG + L DF +S
Sbjct: 137 GNILFTLDGDIKLADFGVS 155
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 85/220 (38%), Gaps = 59/220 (26%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVM--LNRNKVHRACIEREIMSLLDHPFLPTL 371
+G G G V + + A+K M K+ + +N V R E +M L HP + L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVV------------- 418
Y ++ +ICL+ + C GG LLDK + +F +DS A +VV
Sbjct: 94 YEVYEDEQYICLVMELCHGGH---LLDK--LNVFIDDSTGKCAMDVVKTQICPCPECNEE 148
Query: 419 ------------------------------IGLEYLHCLGIIYRDLKPENILL--QKDGH 446
L YLH GI +RD+KPEN L K
Sbjct: 149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFE 208
Query: 447 VVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKWLTGYFT 486
+ L DF LS + FY + +Y + K T YF
Sbjct: 209 IKLVDFGLS-------KEFYKLNNGEYYGMTTKAGTPYFV 241
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G + E++A K + KS++L ++ + +E I L H + +
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
F+ + + ++ + C L L ++ K E AR+Y ++V+G +YLH +I+RD
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
LK N+ L +D V + DF L+
Sbjct: 147 LKLGNLFLNEDLEVKIGDFGLA 168
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G + E++A K + KS++L ++ + +E I L H + +
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
F+ + + ++ + C L L ++ K E AR+Y ++V+G +YLH +I+RD
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
LK N+ L +D V + DF L+
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLA 188
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G + E++A K + KS++L ++ + +E I L H + +
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
F+ + + ++ + C L L ++ K E AR+Y ++V+G +YLH +I+RD
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
LK N+ L +D V + DF L+
Sbjct: 165 LKLGNLFLNEDLEVKIGDFGLA 186
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G + E++A K + KS++L ++ + +E I L H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
F+ + + ++ + C L L ++ K E AR+Y ++V+G +YLH +I+RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
LK N+ L +D V + DF L+
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G + E++A K + KS++L ++ + +E I L H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
F+ + + ++ + C L L ++ K E AR+Y ++V+G +YLH +I+RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
LK N+ L +D V + DF L+
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G + E++A K + KS++L ++ + +E I L H + +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
F+ + + ++ + C L L ++ K E AR+Y ++V+G +YLH +I+RD
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
LK N+ L +D V + DF L+
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLA 162
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G + + E++A K + KS++L ++ + E I LD+P + +
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
F+ + ++ + C L L ++ K E AR++ + + G++YLH +I+RD
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 151
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
LK N+ L D V + DF L+
Sbjct: 152 LKLGNLFLNDDMDVKIGDFGLA 173
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G + + E++A K + KS++L ++ + E I LD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
F+ + ++ + C L L ++ K E AR++ + + G++YLH +I+RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
LK N+ L D V + DF L+
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G + + E++A K + KS++L ++ + E I LD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
F+ + ++ + C L L ++ K E AR++ + + G++YLH +I+RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
LK N+ L D V + DF L+
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G + + E++A K + KS++L ++ + E I LD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
F+ + ++ + C L L ++ K E AR++ + + G++YLH +I+RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
LK N+ L D V + DF L+
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLA 189
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 15/142 (10%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL--LDHPFLPTL 371
LG G G VH +E + G A+K + R +V RA E+M+ L P + L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEVFRA---EELMACAGLTSPRIVPL 131
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
Y + + + + + GG L L+ +Q ED A +Y + + GLEYLH I++
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILH 189
Query: 432 RDLKPENILLQKDG-HVVLTDF 452
D+K +N+LL DG H L DF
Sbjct: 190 GDVKADNVLLSSDGSHAALCDF 211
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 320 GSVHLVELQGA-----GELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYAS 374
G ++QGA G+ YA+K +EK +R++V R + + + L
Sbjct: 22 GEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREV--ETLYQCQGNKNILELIEF 79
Query: 375 FQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDL 434
F+ T L+ + GG + A + KQ K F E A +V L++LH GI +RDL
Sbjct: 80 FEDDTRFYLVFEKLQGGSILAHIQKQ--KHFNEREASRVVRDVAAALDFLHTKGIAHRDL 137
Query: 435 KPENILL---QKDGHVVLTDFDLS----FMTSCKP 462
KPENIL +K V + DFDL SC P
Sbjct: 138 KPENILCESPEKVSPVKICDFDLGSGMKLNNSCTP 172
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 15/142 (10%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL--LDHPFLPTL 371
LG G G VH +E + G A+K + R +V RA E+M+ L P + L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEVFRA---EELMACAGLTSPRIVPL 150
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
Y + + + + + GG L L+ +Q ED A +Y + + GLEYLH I++
Sbjct: 151 YGAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILH 208
Query: 432 RDLKPENILLQKDG-HVVLTDF 452
D+K +N+LL DG H L DF
Sbjct: 209 GDVKADNVLLSSDGSHAALCDF 230
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL---DHPFL 368
KPLG G + + + +A+K + K + N ++EI +L HP +
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEAN--------TQKEITALKLCEGHPNI 68
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
L+ F H L+ + GGELF + K+ K F E A + ++V + ++H +G
Sbjct: 69 VKLHEVFHDQLHTFLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDVG 126
Query: 429 IIYRDLKPENILL 441
+++RDLKPEN+L
Sbjct: 127 VVHRDLKPENLLF 139
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G T +V + G+L+A+K L V E E++ L+H + L+A
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR--EFEVLKKLNHKNIVKLFA 74
Query: 374 SFQTST--HICLITDFCPGGELFALLDKQPMKIFREDSARFYAA--EVVIGLEYLHCLGI 429
+ +T H LI +FCP G L+ +L+ +P + + F +VV G+ +L GI
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 430 IYRDLKPENIL--LQKDGHVV--LTDF 452
++R++KP NI+ + +DG V LTDF
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDF 160
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G T +V + G+L+A+K L V E E++ L+H + L+A
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR--EFEVLKKLNHKNIVKLFA 74
Query: 374 SFQTST--HICLITDFCPGGELFALLDKQPMKIFREDSARFYAA--EVVIGLEYLHCLGI 429
+ +T H LI +FCP G L+ +L+ +P + + F +VV G+ +L GI
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 430 IYRDLKPENIL--LQKDGHVV--LTDF 452
++R++KP NI+ + +DG V LTDF
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDF 160
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
Query: 330 AGELYAMKAMEKSVMLNRN--KVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDF 387
AG+ YA + + R+ K+ R E I LL HP + L+ S H LI D
Sbjct: 35 AGQEYAAMIINTKKLSARDHQKLER---EARICRLLKHPNIVRLHDSISEEGHHYLIFDL 91
Query: 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQ---KD 444
GGELF D + + E A +++ + + H +G+++R+LKPEN+LL K
Sbjct: 92 VTGGELFE--DIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKG 149
Query: 445 GHVVLTDFDLSFMTSCKPQVFY 466
V L DF L+ + Q ++
Sbjct: 150 AAVKLADFGLAIEVEGEQQAWF 171
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 9/150 (6%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL---LDHPFL 368
K LG G V + G+ YA K ++K R + RA I EI L P +
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKR---RRGQDCRAEILHEIAVLELAKSCPRV 91
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
L+ ++ ++ I LI ++ GGE+F+L + ++ E+ +++ G+ YLH
Sbjct: 92 INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN 151
Query: 429 IIYRDLKPENILLQKD---GHVVLTDFDLS 455
I++ DLKP+NILL G + + DF +S
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMS 181
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E ++S D P++ Y S+ T + +I ++ GG LL+ P+ E
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD---ETQIATILR 111
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
E++ GL+YLH I+RD+K N+LL + G V L DF ++
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 25/199 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVML-----NRNKVHRACIEREIMSLLDHP 366
K LG G G V L + + A+K + K + E EI+ L+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+ + F + ++ + GGELF + K +E + + Y ++++ ++YLH
Sbjct: 76 CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHE 132
Query: 427 LGIIYRDLKPENILL---QKDGHVVLTDF-------DLSFM-------TSCKPQVFYHAH 469
GII+RDLKPEN+LL ++D + +TDF + S M T P+V
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG 192
Query: 470 VNGFYFIMYKWLTGYFTYV 488
G+ + W G ++
Sbjct: 193 TAGYNRAVDCWSLGVILFI 211
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E ++S D P++ Y S+ T + +I ++ GG LL+ P+ E
Sbjct: 70 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD---ETQIATILR 126
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
E++ GL+YLH I+RD+K N+LL + G V L DF ++
Sbjct: 127 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E ++S D P++ Y S+ T + +I ++ GG LL+ P+ E
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD---ETQIATILR 111
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
E++ GL+YLH I+RD+K N+LL + G V L DF ++
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMK------IFREDS 409
E + MS HP + + Y SF + L+ GG + ++ K + E +
Sbjct: 63 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 122
Query: 410 ARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
EV+ GLEYLH G I+RD+K NILL +DG V + DF +S
Sbjct: 123 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMK------IFREDS 409
E + MS HP + + Y SF + L+ GG + ++ K + E +
Sbjct: 58 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 117
Query: 410 ARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
EV+ GLEYLH G I+RD+K NILL +DG V + DF +S
Sbjct: 118 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 25/199 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVML-----NRNKVHRACIEREIMSLLDHP 366
K LG G G V L + + A+K + K + E EI+ L+HP
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 74
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+ + F + ++ + GGELF + K +E + + Y ++++ ++YLH
Sbjct: 75 CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHE 131
Query: 427 LGIIYRDLKPENILL---QKDGHVVLTDF-------DLSFM-------TSCKPQVFYHAH 469
GII+RDLKPEN+LL ++D + +TDF + S M T P+V
Sbjct: 132 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG 191
Query: 470 VNGFYFIMYKWLTGYFTYV 488
G+ + W G ++
Sbjct: 192 TAGYNRAVDCWSLGVILFI 210
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 25/199 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVML-----NRNKVHRACIEREIMSLLDHP 366
K LG G G V L + + A+K + K + E EI+ L+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+ + F + ++ + GGELF + K +E + + Y ++++ ++YLH
Sbjct: 76 CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHE 132
Query: 427 LGIIYRDLKPENILL---QKDGHVVLTDF-------DLSFM-------TSCKPQVFYHAH 469
GII+RDLKPEN+LL ++D + +TDF + S M T P+V
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG 192
Query: 470 VNGFYFIMYKWLTGYFTYV 488
G+ + W G ++
Sbjct: 193 TAGYNRAVDCWSLGVILFI 211
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 25/199 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVML-----NRNKVHRACIEREIMSLLDHP 366
K LG G G V L + + A+K + K + E EI+ L+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+ + F + ++ + GGELF + K +E + + Y ++++ ++YLH
Sbjct: 76 CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHE 132
Query: 427 LGIIYRDLKPENILL---QKDGHVVLTDF-------DLSFM-------TSCKPQVFYHAH 469
GII+RDLKPEN+LL ++D + +TDF + S M T P+V
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG 192
Query: 470 VNGFYFIMYKWLTGYFTYV 488
G+ + W G ++
Sbjct: 193 TAGYNRAVDCWSLGVILFI 211
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD--HPFLPTL 371
+G G TG V + + G+ A+K M+ R + R + E++ + D H + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDL-----RKQQRRELLFNEVVIMRDYHHDNVVDM 107
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
Y+S+ + ++ +F GG L ++ M E+ V+ L YLH G+I+
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIATVCLSVLRALSYLHNQGVIH 164
Query: 432 RDLKPENILLQKDGHVVLTDFDLSFMTS 459
RD+K ++ILL DG + L+DF S
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVS 192
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 25/199 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVML-----NRNKVHRACIEREIMSLLDHP 366
K LG G G V L + + A+K + K + E EI+ L+HP
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 81
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+ + F + ++ + GGELF + K +E + + Y ++++ ++YLH
Sbjct: 82 CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHE 138
Query: 427 LGIIYRDLKPENILL---QKDGHVVLTDF-------DLSFM-------TSCKPQVFYHAH 469
GII+RDLKPEN+LL ++D + +TDF + S M T P+V
Sbjct: 139 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG 198
Query: 470 VNGFYFIMYKWLTGYFTYV 488
G+ + W G ++
Sbjct: 199 TAGYNRAVDCWSLGVILFI 217
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 321 SVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTH 380
+V ++++ G G A + E L + I R++ HP + L +++T+T
Sbjct: 46 AVKIIDVTGGGSFSAEEVQE----LREATLKEVDILRKVSG---HPNIIQLKDTYETNTF 98
Query: 381 ICLITDFCPGGELF-------ALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
L+ D GELF L +K+ KI R EV+ L H L I++RD
Sbjct: 99 FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA------LLEVICAL---HKLNIVHRD 149
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
LKPENILL D ++ LTDF S
Sbjct: 150 LKPENILLDDDMNIKLTDFGFS 171
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 321 SVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTH 380
+V ++++ G G A + E L + I R++ HP + L +++T+T
Sbjct: 33 AVKIIDVTGGGSFSAEEVQE----LREATLKEVDILRKVSG---HPNIIQLKDTYETNTF 85
Query: 381 ICLITDFCPGGELF-------ALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
L+ D GELF L +K+ KI R EV+ L H L I++RD
Sbjct: 86 FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA------LLEVICAL---HKLNIVHRD 136
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
LKPENILL D ++ LTDF S
Sbjct: 137 LKPENILLDDDMNIKLTDFGFS 158
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 321 SVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTH 380
+V ++++ G G A + E L + I R++ HP + L +++T+T
Sbjct: 46 AVKIIDVTGGGSFSAEEVQE----LREATLKEVDILRKVSG---HPNIIQLKDTYETNTF 98
Query: 381 ICLITDFCPGGELF-------ALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
L+ D GELF L +K+ KI R EV+ L H L I++RD
Sbjct: 99 FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA------LLEVICAL---HKLNIVHRD 149
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
LKPENILL D ++ LTDF S
Sbjct: 150 LKPENILLDDDMNIKLTDFGFS 171
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E ++S D P++ Y S+ T + +I ++ GG LL+ P+ E
Sbjct: 75 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD---ETQIATILR 131
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
E++ GL+YLH I+RD+K N+LL + G V L DF ++
Sbjct: 132 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA 171
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E ++S D P++ + S+ ST + +I ++ GG LL P++ E
Sbjct: 67 EITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLE---ETYIATILR 123
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
E++ GL+YLH I+RD+K N+LL + G V L DF ++
Sbjct: 124 EILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD--HPFLPTL 371
+G G TG V L + +G A+K M+ R + R + E++ + D H + +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDL-----RKQQRRELLFNEVVIMRDYQHFNVVEM 107
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
Y S+ + ++ +F GG AL D E+ V+ L YLH G+I+
Sbjct: 108 YKSYLVGEELWVLMEFLQGG---ALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIH 164
Query: 432 RDLKPENILLQKDGHVVLTDF 452
RD+K ++ILL DG V L+DF
Sbjct: 165 RDIKSDSILLTLDGRVKLSDF 185
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 331 GELYAMKAMEKSVMLNRN--KVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFC 388
G+ YA K + + R+ K+ R E I LL HP + L+ S L+ D
Sbjct: 29 GQEYAAKIINTKKLSARDHQKLER---EARICRLLKHPNIVRLHDSISEEGFHYLVFDLV 85
Query: 389 PGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILL---QKDG 445
GGELF D + + E A +++ + + H GI++RDLKPEN+LL K
Sbjct: 86 TGGELFE--DIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGA 143
Query: 446 HVVLTDFDLSFMTSCKPQVFY 466
V L DF L+ Q ++
Sbjct: 144 AVKLADFGLAIEVQGDQQAWF 164
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 25/199 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVML-----NRNKVHRACIEREIMSLLDHP 366
K LG G G V L + + A++ + K + E EI+ L+HP
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 200
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+ + F + ++ + GGELF + K +E + + Y ++++ ++YLH
Sbjct: 201 CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHE 257
Query: 427 LGIIYRDLKPENILL---QKDGHVVLTDF-------DLSFM-------TSCKPQVFYHAH 469
GII+RDLKPEN+LL ++D + +TDF + S M T P+V
Sbjct: 258 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG 317
Query: 470 VNGFYFIMYKWLTGYFTYV 488
G+ + W G ++
Sbjct: 318 TAGYNRAVDCWSLGVILFI 336
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 25/199 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVML-----NRNKVHRACIEREIMSLLDHP 366
K LG G G V L + + A++ + K + E EI+ L+HP
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 214
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+ + F + ++ + GGELF + K +E + + Y ++++ ++YLH
Sbjct: 215 CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHE 271
Query: 427 LGIIYRDLKPENILL---QKDGHVVLTDF-------DLSFM-------TSCKPQVFYHAH 469
GII+RDLKPEN+LL ++D + +TDF + S M T P+V
Sbjct: 272 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG 331
Query: 470 VNGFYFIMYKWLTGYFTYV 488
G+ + W G ++
Sbjct: 332 TAGYNRAVDCWSLGVILFI 350
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 334 YAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGEL 393
YA+K ++KS R+ I ++ HP + TL + H+ L+T+ GGEL
Sbjct: 55 YAVKVIDKS---KRDPSEEIEI---LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL 108
Query: 394 FALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENIL 440
+ +Q K F E A F + +EYLH G+++RDLKP NIL
Sbjct: 109 LDKILRQ--KFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNIL 153
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 334 YAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGEL 393
YA+K ++KS R+ I ++ HP + TL + H+ L+T+ GGEL
Sbjct: 55 YAVKVIDKS---KRDPSEEIEI---LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL 108
Query: 394 FALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENIL 440
+ +Q K F E A F + +EYLH G+++RDLKP NIL
Sbjct: 109 LDKILRQ--KFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNIL 153
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 331 GELYAMKAMEKSVMLNRN--KVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFC 388
G+ YA K + + R+ K+ R E I LL HP + L+ S L+ D
Sbjct: 29 GQEYAAKIINTKKLSARDHQKLER---EARICRLLKHPNIVRLHDSISEEGFHYLVFDLV 85
Query: 389 PGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILL---QKDG 445
GGELF D + + E A +++ + + H GI++RDLKPEN+LL K
Sbjct: 86 TGGELFE--DIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGA 143
Query: 446 HVVLTDFDLSFMTSCKPQVFY 466
V L DF L+ Q ++
Sbjct: 144 AVKLADFGLAIEVQGDQQAWF 164
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
+G G G+VH E G+ ++ ME+ R V+ E IM L HP +
Sbjct: 45 IGAGSFGTVHRAEWHGS-DVAVKILMEQDFHAER--VNEFLREVAIMKRLRHPNIVLFMG 101
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA-EVVIGLEYLHCLG--II 430
+ ++ ++T++ G L+ LL K + ++ R A +V G+ YLH I+
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTS 459
+RDLK N+L+ K V + DF LS + +
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKA 190
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 355 IERE--IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF 412
+ERE I L HP + L+ S Q + L+ D GGELF D + + E A
Sbjct: 75 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE--DIVAREFYSEADASH 132
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILL---QKDGHVVLTDFDLSF 456
+++ + Y H GI++R+LKPEN+LL K V L DF L+
Sbjct: 133 CIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFL----- 368
LG G G V Q GE A+K + L+ R C+E +IM L+HP +
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 369 -PTLYASFQTSTHICLITDFCPGGELFALLDK-QPMKIFREDSARFYAAEVVIGLEYLHC 426
P + L ++C GG+L L++ + +E R +++ L YLH
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 427 LGIIYRDLKPENILLQ 442
II+RDLKPENI+LQ
Sbjct: 141 NRIIHRDLKPENIVLQ 156
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFL----- 368
LG G G V Q GE A+K + L+ R C+E +IM L+HP +
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 369 -PTLYASFQTSTHICLITDFCPGGELFALLDK-QPMKIFREDSARFYAAEVVIGLEYLHC 426
P + L ++C GG+L L++ + +E R +++ L YLH
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 427 LGIIYRDLKPENILLQ 442
II+RDLKPENI+LQ
Sbjct: 140 NRIIHRDLKPENIVLQ 155
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
G+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKEL 59
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
+HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 2/175 (1%)
Query: 300 GEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI 359
G + + +F+ ++ +G G G V+ + GE+ A+K + A E +
Sbjct: 1 GPLVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISL 59
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
+ L+HP + L T + L+ +F +L +D + + Y +++
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
GL + H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 173
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 300 GEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI 359
GE IG F + ++ L++++ E +KA ++ VM R H +
Sbjct: 38 GELIGKGRFGQVYHGRWHGEVAIRLIDIERDNE-DQLKAFKREVMAYRQTRHENVV---- 92
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
+ + H+ +IT C G L++++ + + + R A E+V
Sbjct: 93 ----------LFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI-VLDVNKTRQIAQEIVK 141
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
G+ YLH GI+++DLK +N+ +G VV+TDF L
Sbjct: 142 GMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGL 175
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD--- 364
F+ ++ +G G G V+ G+L A+K M+ + I++EI L
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT------GDEEEEIKQEINMLKKYSH 79
Query: 365 HPFLPTLYASF------QTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVV 418
H + T Y +F + L+ +FC G + L+ +E+ + E++
Sbjct: 80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL 139
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
GL +LH +I+RD+K +N+LL ++ V L DF +S
Sbjct: 140 RGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 12/179 (6%)
Query: 282 PHKRDNSSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEK 341
P D+ + I+I ++ +PI LG G G V + +G++ A+K +
Sbjct: 30 PRDLDSKACISI---GNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRA 86
Query: 342 SVMLNRNKVHRACIEREI-MSLLDHPFLPTLYASF--QTSTHICL-ITDFCPGGELFALL 397
+V N + R ++ +I M +D PF T Y + + IC+ + D ++
Sbjct: 87 TV--NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVI 144
Query: 398 DKQPMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
DK + ED A +V LE+LH L +I+RD+KP N+L+ G V + DF +S
Sbjct: 145 DKG--QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI-MSLLDHP 366
+PI LG G G V + +G++ A+K + +V N + R ++ +I M +D P
Sbjct: 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV--NSQEQKRLLMDLDISMRTVDCP 66
Query: 367 FLPTLYASF--QTSTHICL-ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
F T Y + + IC+ + D ++DK + ED A +V LE+
Sbjct: 67 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKG--QTIPEDILGKIAVSIVKALEH 124
Query: 424 LHC-LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
LH L +I+RD+KP N+L+ G V + DF +S
Sbjct: 125 LHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 63
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKPEN+L+ +G + L DF L+ + + H V +Y
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 61
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKPEN+L+ +G + L DF L+ + + H V +Y
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAM------EKSVMLNRNKVHRACIEREIMSLLDHPF 367
LG G +V+ + ++ A+K + E +NR A E +++ L HP
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRT----ALREIKLLQELSHPN 73
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
+ L +F ++I L+ DF ++ K + + Y + GLEYLH
Sbjct: 74 IIGLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH 131
Query: 428 GIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
I++RDLKP N+LL ++G + L DF L+ + + H V +Y
Sbjct: 132 WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWY 178
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN--KVHRACIEREIMSLLDHPFLPTL 371
LG G V + G +A K + + R+ K+ R E I L HP + L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRKLQHPNIVRL 70
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
+ S Q + L+ D GGELF D + + E A +++ + Y H GI++
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFE--DIVAREFYSEADASHCIQQILESIAYCHSNGIVH 128
Query: 432 RDLKPENILL---QKDGHVVLTDFDLSF 456
R+LKPEN+LL K V L DF L+
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGLAI 156
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN--KVHRACIEREIMSLLDHPFLPTL 371
LG G V + G +A K + + R+ K+ R E I L HP + L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRKLQHPNIVRL 69
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
+ S Q + L+ D GGELF D + + E A +++ + Y H GI++
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFE--DIVAREFYSEADASHCIQQILESIAYCHSNGIVH 127
Query: 432 RDLKPENILL---QKDGHVVLTDFDLSF 456
R+LKPEN+LL K V L DF L+
Sbjct: 128 RNLKPENLLLASKAKGAAVKLADFGLAI 155
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN--KVHRACIEREIMSLLDHPFLPTL 371
LG G V + G +A K + + R+ K+ R E I L HP + L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRKLQHPNIVRL 70
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
+ S Q + L+ D GGELF D + + E A +++ + Y H GI++
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFE--DIVAREFYSEADASHCIQQILESIAYCHSNGIVH 128
Query: 432 RDLKPENILL---QKDGHVVLTDFDLSF 456
R+LKPEN+LL K V L DF L+
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGLAI 156
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 61
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKPEN+L+ +G + L DF L+ + + H V +Y
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ + T + ++T +C G L+ L K F A + G++YLH II
Sbjct: 72 LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSII 130
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTS-----------------CKPQVF-------- 465
+RDLK NI L +D V + DF L+ + S P+V
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 466 -YHAHVNGFYFIMYKWLTGYFTY 487
+ + V F ++Y+ +TG Y
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLPY 213
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 62
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKPEN+L+ +G + L DF L+ + + H V +Y
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
+G G G+VH E G+ ++ ME+ R V+ E IM L HP +
Sbjct: 45 IGAGSFGTVHRAEWHGS-DVAVKILMEQDFHAER--VNEFLREVAIMKRLRHPNIVLFMG 101
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA-EVVIGLEYLHCLG--II 430
+ ++ ++T++ G L+ LL K + ++ R A +V G+ YLH I+
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTS 459
+R+LK N+L+ K V + DF LS + +
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACI-EREIMSLL 363
L +F+ K +G G V+ G A+K ++ +++ K CI E +++ L
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDA-KARADCIKEIDLLKQL 89
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLD--KQPMKIFREDSARFYAAEVVIGL 421
+HP + YASF + ++ + G+L ++ K+ ++ E + Y ++ L
Sbjct: 90 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQV--------FYHA----H 469
E++H +++RD+KP N+ + G V L D L S K +Y + H
Sbjct: 150 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 209
Query: 470 VNGFYFIMYKWLTGYFTY 487
NG+ F W G Y
Sbjct: 210 ENGYNFKSDIWSLGCLLY 227
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + GE+ MK + + + E ++M L+HP +
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKEL---IRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ IT++ GG L ++ + F A ++ G+ YLH + II+RD
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSF-AKDIASGMAYLHSMNIIHRD 133
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L N L++++ +VV+ DF L+
Sbjct: 134 LNSHNCLVRENKNVVVADFGLA 155
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN-RNKVHRACIEREIMSLLDHP 366
F+ I LG G+ G V V+ + +G + A K + + RN++ R E +++ + P
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 74
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL-H 425
++ Y +F + I + + GG L +L K+ +I E + A V+ GL YL
Sbjct: 75 YIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KEAKRIPEEILGKVSIA-VLRGLAYLRE 132
Query: 426 CLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I++RD+KP NIL+ G + L DF +S
Sbjct: 133 KHQIMHRDVKPSNILVNSRGEIKLCDFGVS 162
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKEL 59
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
+HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKPEN+L+ +G + L DF L+ + + H V +Y
Sbjct: 119 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ + T+ + ++T +C G L+ L K F A + G++YLH II
Sbjct: 84 LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSII 142
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTS-----------------CKPQVF-------- 465
+RDLK NI L +D V + DF L+ S P+V
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 466 -YHAHVNGFYFIMYKWLTGYFTY 487
+ + V F ++Y+ +TG Y
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPY 225
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E ++S D ++ Y S+ + + +I ++ GG LL P F E
Sbjct: 71 EITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP---FDEFQIATMLK 127
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
E++ GL+YLH I+RD+K N+LL + G V L DF ++
Sbjct: 128 EILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
F+ I LG G G V YA+K + + K+ E +++ L+H +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQY 63
Query: 368 LPTLYASF-------------QTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYA 414
+ YA++ + + + + ++C G L+ L+ + + R++ R +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 415 AEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++ L Y+H GII+RDLKP NI + + +V + DF L+
Sbjct: 124 -QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G VH ++ + G A+K + V V AC + L P + LY
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELV--AC------AGLSSPRIVPLYG 131
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ + + + + GG L L+ + M ED A +Y + + GLEYLH I++ D
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRRILHGD 189
Query: 434 LKPENILLQKDG-HVVLTDF 452
+K +N+LL DG L DF
Sbjct: 190 VKADNVLLSSDGSRAALCDF 209
>pdb|3SW1|A Chain A, Structure Of A Full-Length Bacterial Lov Protein
pdb|3SW1|B Chain B, Structure Of A Full-Length Bacterial Lov Protein
Length = 162
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 43/168 (25%)
Query: 69 LATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEI 128
L + ++ V+ + D +I+ + +F LT Y+R+EIL ++C FL+ +
Sbjct: 27 LQSMVDASNDGIVVAEKEGDDTILIYVNAAFEYLTGYSRDEILYQDCRFLQGDD------ 80
Query: 129 LGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLI 188
DQ ++IR A+ E R L
Sbjct: 81 ------------------------------------RDQLGRARIRKAMAEGRPCREVLR 104
Query: 189 NYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLRNRLSE 236
NY K G FWN + P++ + YFIG+Q D S VE L L+E
Sbjct: 105 NYRKDGSAFWNELSITPVKSDFDQRTYFIGIQKDVSRQVE-LERELAE 151
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 63
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 27/143 (18%)
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ + T + ++T +C G L+ L K F A + G++YLH II
Sbjct: 84 LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSII 142
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTS-----------------CKPQVF-------- 465
+RDLK NI L +D V + DF L+ S P+V
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 466 -YHAHVNGFYFIMYKWLTGYFTY 487
+ + V F ++Y+ +TG Y
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 60
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVM-LNRNKVHRACIEREIMSLLDHP 366
F+ I LG G+ G V V + +G + A K + + RN++ R E +++ + P
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 83
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQ---PMKIFREDSARFYAAEVVIGLEY 423
++ Y +F + I + + GG L +L K P +I + S V+ GL Y
Sbjct: 84 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI-----AVIKGLTY 138
Query: 424 L-HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L I++RD+KP NIL+ G + L DF +S
Sbjct: 139 LREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKEL 59
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
+HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 62
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 63
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 60
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKEL 59
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
+HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKEL 59
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
+HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 62
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 60
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 64
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 173
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 61
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 63
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 59
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 168
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 63
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 62
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 59
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 168
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 61
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 67
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 176
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 60
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN-RNKVHRACIEREIMSLLDHP 366
F+ I LG G+ G V V + +G + A K + + RN++ R E +++ + P
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 126
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQ---PMKIFREDSARFYAAEVVIGLEY 423
++ Y +F + I + + GG L +L K P +I + S V+ GL Y
Sbjct: 127 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI-----AVIKGLTY 181
Query: 424 L-HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L I++RD+KP NIL+ G + L DF +S
Sbjct: 182 LREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 59
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 61
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 170
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN-RNKVHRACIEREIMSLLDHP 366
F+ I LG G+ G V V + +G + A K + + RN++ R E +++ + P
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 67
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQ---PMKIFREDSARFYAAEVVIGLEY 423
++ Y +F + I + + GG L +L K P +I + S V+ GL Y
Sbjct: 68 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI-----AVIKGLTY 122
Query: 424 L-HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L I++RD+KP NIL+ G + L DF +S
Sbjct: 123 LREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K ++ LG G+ GSV + GE+ A+K ++ S + R E EI+
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 70
Query: 363 LDHPFLPTLYASFQTS--THICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVV 418
L H + ++ ++ LI +F P G L L K +I D + Y +++
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI---DHIKLLQYTSQIC 127
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL I+RDL NIL++ + V + DF L+
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 6/126 (4%)
Query: 331 GELYAMKAMEKSVMLNRNKVHRACIEREIM---SLLDHPFLPTLYASFQTSTHICLITDF 387
GE++ MK + KV E + + L P + LY + + + + +
Sbjct: 72 GEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131
Query: 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG-H 446
GG L L+ + M ED A +Y + + GLEYLH I++ D+K +N+LL DG
Sbjct: 132 LEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSR 189
Query: 447 VVLTDF 452
L DF
Sbjct: 190 AALCDF 195
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 67
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 176
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN-RNKVHRACIEREIMSLLDHP 366
F+ I LG G+ G V V + +G + A K + + RN++ R E +++ + P
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 91
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQ---PMKIFREDSARFYAAEVVIGLEY 423
++ Y +F + I + + GG L +L K P +I + S V+ GL Y
Sbjct: 92 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI-----AVIKGLTY 146
Query: 424 L-HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L I++RD+KP NIL+ G + L DF +S
Sbjct: 147 LREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K I LG G+ GSV L G L A+K ++ S + R E +I+
Sbjct: 11 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR---EIQILKA 67
Query: 363 LDHPFL----PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAE 416
L F+ Y + S L+ ++ P G L L + ++ D++R Y+++
Sbjct: 68 LHSDFIVKYRGVSYGPGRQSLR--LVMEYLPSGCLRDFLQRHRARL---DASRLLLYSSQ 122
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ G+EYL ++RDL NIL++ + HV + DF L+
Sbjct: 123 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 161
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN-RNKVHRACIEREIMSLLDHP 366
F+ I LG G+ G V V + +G + A K + + RN++ R E +++ + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQ---PMKIFREDSARFYAAEVVIGLEY 423
++ Y +F + I + + GG L +L K P +I + S V+ GL Y
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI-----AVIKGLTY 119
Query: 424 L-HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L I++RD+KP NIL+ G + L DF +S
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 24/184 (13%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAM------EKSVMLNRNKVHRACIEREIMSLLDHPF 367
+G G +G+V+ G+ A++ M +K +++N V R I++ LD
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD--- 84
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA--EVVIGLEYLH 425
S+ + ++ ++ GG L ++ + M D + A E + LE+LH
Sbjct: 85 ------SYLVGDELWVVMEYLAGGSLTDVVTETCM-----DEGQIAAVCRECLQALEFLH 133
Query: 426 CLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKWLTGYF 485
+I+RD+K +NILL DG V LTDF F P+ + + G + M +
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDF--GFCAQITPEQSKRSEMVGTPYWMAPEVVTRK 191
Query: 486 TYVP 489
Y P
Sbjct: 192 AYGP 195
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 6/126 (4%)
Query: 331 GELYAMKAMEKSVMLNRNKVHRACIEREIM---SLLDHPFLPTLYASFQTSTHICLITDF 387
GE++ MK + KV E + + L P + LY + + + + +
Sbjct: 88 GEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 147
Query: 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG-H 446
GG L L+ + M ED A +Y + + GLEYLH I++ D+K +N+LL DG
Sbjct: 148 LEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSR 205
Query: 447 VVLTDF 452
L DF
Sbjct: 206 AALCDF 211
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN-RNKVHRACIEREIMSLLDHP 366
F+ I LG G+ G V V + +G + A K + + RN++ R E +++ + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQ---PMKIFREDSARFYAAEVVIGLEY 423
++ Y +F + I + + GG L +L K P +I + S V+ GL Y
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI-----AVIKGLTY 119
Query: 424 L-HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L I++RD+KP NIL+ G + L DF +S
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 2/168 (1%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHP 366
+F+ ++ +G G G V+ + GE+ A+K + A E ++ L+HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHP 61
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+ L T + L+ +F +L +D + + Y +++ GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
+++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 6/145 (4%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
++ +G G G VHL ++ A+K + + M + + A E+M L HP L
Sbjct: 13 VQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIEEA----EVMMKLSHPKLVQ 67
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
LY ICL+T+F G L L Q +F ++ +V G+ YL +I
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVI 126
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDL N L+ ++ + ++DF ++
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMT 151
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN-RNKVHRACIEREIMSLLDHP 366
F+ I LG G+ G V V + +G + A K + + RN++ R E +++ + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQ---PMKIFREDSARFYAAEVVIGLEY 423
++ Y +F + I + + GG L +L K P +I + S V+ GL Y
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI-----AVIKGLTY 119
Query: 424 L-HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L I++RD+KP NIL+ G + L DF +S
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN-RNKVHRACIEREIMSLLDHP 366
F+ I LG G+ G V V + +G + A K + + RN++ R E +++ + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQ---PMKIFREDSARFYAAEVVIGLEY 423
++ Y +F + I + + GG L +L K P +I + S V+ GL Y
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI-----AVIKGLTY 119
Query: 424 L-HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L I++RD+KP NIL+ G + L DF +S
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN-RNKVHRACIEREIMSLLDHP 366
F+ I LG G+ G V V + +G + A K + + RN++ R E +++ + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQ---PMKIFREDSARFYAAEVVIGLEY 423
++ Y +F + I + + GG L +L K P +I + S V+ GL Y
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI-----AVIKGLTY 119
Query: 424 L-HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L I++RD+KP NIL+ G + L DF +S
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K I LG G+ GSV L G L A+K ++ S + R E +I+
Sbjct: 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR---EIQILKA 80
Query: 363 LDHPFL----PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAE 416
L F+ Y + S L+ ++ P G L L + ++ D++R Y+++
Sbjct: 81 LHSDFIVKYRGVSYGPGRQSLR--LVMEYLPSGCLRDFLQRHRARL---DASRLLLYSSQ 135
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ G+EYL ++RDL NIL++ + HV + DF L+
Sbjct: 136 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 174
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K I LG G+ GSV L G L A+K ++ S + R E +I+
Sbjct: 12 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR---EIQILKA 68
Query: 363 LDHPFL----PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAE 416
L F+ Y + S L+ ++ P G L L + ++ D++R Y+++
Sbjct: 69 LHSDFIVKYRGVSYGPGRQSLR--LVMEYLPSGCLRDFLQRHRARL---DASRLLLYSSQ 123
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ G+EYL ++RDL NIL++ + HV + DF L+
Sbjct: 124 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 162
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 10/166 (6%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAME---KSVMLNRNKVHRACIEREIMSLLD 364
++P+ +G G G+V+ +G A+K++ L + V + R + + +
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF-E 64
Query: 365 HPFLPTLYASFQTS-----THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
HP + L TS + L+ + +L LDK P ++ + + +
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVF 465
GL++LH I++RDLKPENIL+ G V L DF L+ + S + +F
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALF 169
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 331 GELYAMKAMEKSVMLNRN--KVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFC 388
G YA K + + R+ K+ R E I LL H + L+ S L+ D
Sbjct: 29 GHEYAAKIINTKKLSARDHQKLER---EARICRLLKHSNIVRLHDSISEEGFHYLVFDLV 85
Query: 389 PGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQ---KDG 445
GGELF D + + E A +++ + + H +G+++RDLKPEN+LL K
Sbjct: 86 TGGELFE--DIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGA 143
Query: 446 HVVLTDFDLSFMTSCKPQVFY 466
V L DF L+ Q ++
Sbjct: 144 AVKLADFGLAIEVQGDQQAWF 164
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 24/184 (13%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAM------EKSVMLNRNKVHRACIEREIMSLLDHPF 367
+G G +G+V+ G+ A++ M +K +++N V R I++ LD
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD--- 84
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA--EVVIGLEYLH 425
S+ + ++ ++ GG L ++ + M D + A E + LE+LH
Sbjct: 85 ------SYLVGDELWVVMEYLAGGSLTDVVTETCM-----DEGQIAAVCRECLQALEFLH 133
Query: 426 CLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKWLTGYF 485
+I+RD+K +NILL DG V LTDF F P+ + + G + M +
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDF--GFCAQITPEQSKRSXMVGTPYWMAPEVVTRK 191
Query: 486 TYVP 489
Y P
Sbjct: 192 AYGP 195
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 5/173 (2%)
Query: 284 KRDNSSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
KRDN+ + +++ G L ++ +KP+G G G V A+K + +
Sbjct: 5 KRDNNFY-SVE--IGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPF 61
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMK 403
N+ RA E +M +++H + L F + D EL Q ++
Sbjct: 62 Q-NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 404 I-FREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ + + ++++G+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 24/184 (13%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAM------EKSVMLNRNKVHRACIEREIMSLLDHPF 367
+G G +G+V+ G+ A++ M +K +++N V R I++ LD
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD--- 85
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA--EVVIGLEYLH 425
S+ + ++ ++ GG L ++ + M D + A E + LE+LH
Sbjct: 86 ------SYLVGDELWVVMEYLAGGSLTDVVTETCM-----DEGQIAAVCRECLQALEFLH 134
Query: 426 CLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKWLTGYF 485
+I+RD+K +NILL DG V LTDF F P+ + + G + M +
Sbjct: 135 SNQVIHRDIKSDNILLGMDGSVKLTDF--GFCAQITPEQSKRSXMVGTPYWMAPEVVTRK 192
Query: 486 TYVP 489
Y P
Sbjct: 193 AYGP 196
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL----- 362
++P+ +G G G+V+ +G A+K++ RE+ L
Sbjct: 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEA 70
Query: 363 LDHPFLPTLYASFQTS-----THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEV 417
+HP + L TS + L+ + +L LDK P ++ + +
Sbjct: 71 FEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459
+ GL++LH I++RDLKPENIL+ G V L DF L+ + S
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS 171
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 24/184 (13%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAM------EKSVMLNRNKVHRACIEREIMSLLDHPF 367
+G G +G+V+ G+ A++ M +K +++N V R I++ LD
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD--- 84
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA--EVVIGLEYLH 425
S+ + ++ ++ GG L ++ + M D + A E + LE+LH
Sbjct: 85 ------SYLVGDELWVVMEYLAGGSLTDVVTETCM-----DEGQIAAVCRECLQALEFLH 133
Query: 426 CLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKWLTGYF 485
+I+RD+K +NILL DG V LTDF F P+ + + G + M +
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDF--GFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 191
Query: 486 TYVP 489
Y P
Sbjct: 192 AYGP 195
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 355 IERE--IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF 412
+ERE I LL HP + L+ S L+ D GGELF D + + E A
Sbjct: 77 LEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE--DIVAREYYSEADASH 134
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQ---KDGHVVLTDFDLSFMTSCKPQVFY 466
+++ + ++H I++RDLKPEN+LL K V L DF L+ + Q ++
Sbjct: 135 CIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWF 191
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 5/173 (2%)
Query: 284 KRDNSSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
KRDN+ + +++ G L ++ +KP+G G G V A+K + +
Sbjct: 5 KRDNNFY-SVE--IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMK 403
N+ RA E +M +++H + L F + D EL Q ++
Sbjct: 62 Q-NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 404 I-FREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ + + ++++G+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAME---KSVMLNRNKVHRACIEREIMSLLD 364
++P+ +G G G+V+ +G A+K++ L + V + R + + +
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF-E 64
Query: 365 HPFLPTLYASFQTS-----THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
HP + L TS + L+ + +L LDK P ++ + + +
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459
GL++LH I++RDLKPENIL+ G V L DF L+ + S
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 5/173 (2%)
Query: 284 KRDNSSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
KRDN+ + +++ G L ++ +KP+G G G V A+K + +
Sbjct: 5 KRDNNFY-SVE--IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMK 403
N+ RA E +M +++H + L F + D EL Q ++
Sbjct: 62 Q-NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 404 I-FREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ + + ++++G+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAME---KSVMLNRNKVHRACIEREIMSLLD 364
++P+ +G G G+V+ +G A+K++ L + V + R + + +
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF-E 64
Query: 365 HPFLPTLYASFQTS-----THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
HP + L TS + L+ + +L LDK P ++ + + +
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459
GL++LH I++RDLKPENIL+ G V L DF L+ + S
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|4HIA|A Chain A, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein
pdb|4HIA|B Chain B, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein
Length = 176
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 61/161 (37%), Gaps = 42/161 (26%)
Query: 62 DIRQGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELT 121
D +Q + +R + D +P+ P++ A+ FL +T YT +ILG NC FL+
Sbjct: 2 DQKQFEKIRAVFDRSGVALTLVDMSLPEQPVVLANPPFLRMTGYTEGQILGFNCRFLQRG 61
Query: 122 EYTREEILGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQR 181
+ + + IRDA++ R
Sbjct: 62 D------------------------------------------ENAQARADIRDALKLGR 79
Query: 182 EITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLD 222
E+ V L NY + + F NL L P+ YF+G Q +
Sbjct: 80 ELQVVLRNYRANDEPFDNLLFLHPVGGRPDAPDYFLGSQFE 120
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 355 IEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALL-DKQPMKIFREDSARFY 413
+E +S ++HP + LY + +CL+ ++ GG L+ +L +P+ + A +
Sbjct: 51 VELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 108
Query: 414 AAEVVIGLEYLHCL---GIIYRDLKPENILLQKDGHVV-LTDFDLSFMTSCKPQ 463
+ G+ YLH + +I+RDLKP N+LL G V+ + DF T+C Q
Sbjct: 109 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG----TACDIQ 158
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 27/145 (18%)
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + TL + ++ ++T+ GGEL + +Q K F E A + +EYL
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYL 132
Query: 425 HCLGIIYRDLKPENIL-LQKDGH---VVLTDFDLS---------FMTSC------KPQVF 465
H G+++RDLKP NIL + + G+ + + DF + MT C P+V
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 192
Query: 466 ----YHAHVN--GFYFIMYKWLTGY 484
Y A + ++Y LTGY
Sbjct: 193 ERQGYDAACDIWSLGVLLYTMLTGY 217
>pdb|4HJ3|A Chain A, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein
pdb|4HJ3|B Chain B, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein
Length = 176
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 61/161 (37%), Gaps = 42/161 (26%)
Query: 62 DIRQGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELT 121
D +Q + +R + D +P+ P++ A+ FL +T YT +ILG NC FL+
Sbjct: 2 DQKQFEKIRAVFDRSGVALTLVDMSLPEQPLVLANPPFLRMTGYTEGQILGFNCRFLQRG 61
Query: 122 EYTREEILGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQR 181
+ + + IRDA++ R
Sbjct: 62 D------------------------------------------ENAQARADIRDALKLGR 79
Query: 182 EITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLD 222
E+ V L NY + + F NL L P+ YF+G Q +
Sbjct: 80 ELQVVLRNYRANDEPFDNLLFLHPVGGRPDAPDYFLGSQFE 120
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 355 IEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALL-DKQPMKIFREDSARFY 413
+E +S ++HP + LY + +CL+ ++ GG L+ +L +P+ + A +
Sbjct: 50 VELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 107
Query: 414 AAEVVIGLEYLHCL---GIIYRDLKPENILLQKDGHVV-LTDFDLSFMTSCKPQ 463
+ G+ YLH + +I+RDLKP N+LL G V+ + DF T+C Q
Sbjct: 108 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG----TACDIQ 157
>pdb|4HJ6|A Chain A, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein
pdb|4HJ6|B Chain B, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein
Length = 178
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 61/161 (37%), Gaps = 42/161 (26%)
Query: 62 DIRQGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELT 121
D +Q + +R + D +P+ P++ A+ FL +T YT +ILG NC FL+
Sbjct: 4 DQKQFEKIRAVFDRSGVALTLVDMSLPEQPLVLANPPFLRMTGYTEGQILGFNCRFLQRG 63
Query: 122 EYTREEILGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQR 181
+ + + IRDA++ R
Sbjct: 64 D------------------------------------------ENAQARADIRDALKLGR 81
Query: 182 EITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLD 222
E+ V L NY + + F NL L P+ YF+G Q +
Sbjct: 82 ELQVVLRNYRANDEPFDNLLFLHPVGGRPDAPDYFLGSQFE 122
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K I LG G+ GSV L G L A+K ++ S + R E +I+
Sbjct: 8 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR---EIQILKA 64
Query: 363 LDHPFLPTLYA-SFQTS-THICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVV 418
L F+ S+ + L+ ++ P G L L + ++ D++R Y++++
Sbjct: 65 LHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARL---DASRLLLYSSQIC 121
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL ++RDL NIL++ + HV + DF L+
Sbjct: 122 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 158
>pdb|4HJ4|A Chain A, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein
pdb|4HJ4|B Chain B, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein
pdb|4HNB|A Chain A, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein
pdb|4HNB|B Chain B, Crystal Structure Of Rhodobacter Sphaeroides Lov Protein
Length = 177
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 61/161 (37%), Gaps = 42/161 (26%)
Query: 62 DIRQGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELT 121
D +Q + +R + D +P+ P++ A+ FL +T YT +ILG NC FL+
Sbjct: 3 DQKQFEKIRAVFDRSGVALTLVDMSLPEQPLVLANPPFLRMTGYTEGQILGFNCRFLQRG 62
Query: 122 EYTREEILGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQR 181
+ + + IRDA++ R
Sbjct: 63 D------------------------------------------ENAQARADIRDALKLGR 80
Query: 182 EITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLD 222
E+ V L NY + + F NL L P+ YF+G Q +
Sbjct: 81 ELQVVLRNYRANDEPFDNLLFLHPVGGRPDAPDYFLGSQFE 121
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K ++ LG G+ GSV + GE+ A+K ++ S + R E EI+
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 66
Query: 363 LDHPFLPTLYASFQTS--THICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVV 418
L H + ++ ++ LI ++ P G L L K +I D + Y +++
Sbjct: 67 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 123
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL I+RDL NIL++ + V + DF L+
Sbjct: 124 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 160
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K ++ LG G+ GSV + GE+ A+K ++ S + R E EI+
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 74
Query: 363 LDHPFLPTLYASFQTS--THICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVV 418
L H + ++ ++ LI ++ P G L L K +I D + Y +++
Sbjct: 75 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 131
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL I+RDL NIL++ + V + DF L+
Sbjct: 132 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 168
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 63
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ + +L +D + + Y +++ GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+ + A E ++ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTE-TEGVPSTAIREISLLKELN 60
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+ + A E ++ L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTE-TEGVPSTAIREISLLKELN 59
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ +F +L +D + + Y +++ GL +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K ++ LG G+ GSV + GE+ A+K ++ S + R E EI+
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 67
Query: 363 LDHPFLPTLYASFQTS--THICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVV 418
L H + ++ ++ LI ++ P G L L K +I D + Y +++
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 124
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL I+RDL NIL++ + V + DF L+
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K ++ LG G+ GSV + GE+ A+K ++ S + R E EI+
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 70
Query: 363 LDHPFLPTLYASFQTS--THICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVV 418
L H + ++ ++ LI ++ P G L L K +I D + Y +++
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 127
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL I+RDL NIL++ + V + DF L+
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K ++ LG G+ GSV + GE+ A+K ++ S + R E EI+
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 67
Query: 363 LDHPFLPTLYASFQTS--THICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVV 418
L H + ++ ++ LI ++ P G L L K +I D + Y +++
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 124
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL I+RDL NIL++ + V + DF L+
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K ++ LG G+ GSV + GE+ A+K ++ S + R E EI+
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 72
Query: 363 LDHPFLPTLYASFQTS--THICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVV 418
L H + ++ ++ LI ++ P G L L K +I D + Y +++
Sbjct: 73 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 129
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL I+RDL NIL++ + V + DF L+
Sbjct: 130 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 166
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K ++ LG G+ GSV + GE+ A+K ++ S + R E EI+
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 65
Query: 363 LDHPFLPTLYASFQTS--THICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVV 418
L H + ++ ++ LI ++ P G L L K +I D + Y +++
Sbjct: 66 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 122
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL I+RDL NIL++ + V + DF L+
Sbjct: 123 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 159
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K ++ LG G+ GSV + GE+ A+K ++ S + R E EI+
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 67
Query: 363 LDHPFLPTLYASFQTS--THICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVV 418
L H + ++ ++ LI ++ P G L L K +I D + Y +++
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 124
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL I+RDL NIL++ + V + DF L+
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHP 366
H+ I+ LG G V LVE G YA+K + +R + R E ++ L +HP
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQR---EADMHRLFNHP 86
Query: 367 FLPTLYASF---QTSTH-ICLITDFCPGGELFALLD--KQPMKIFREDSARFYAAEVVIG 420
+ L A + + H L+ F G L+ ++ K ED + + G
Sbjct: 87 NILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG 146
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDF 452
LE +H G +RDLKP NILL +G VL D
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLGDEGQPVLMDL 178
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K ++ LG G+ GSV + GE+ A+K ++ S + R E EI+
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 71
Query: 363 LDHPFLPTLYASFQTS--THICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVV 418
L H + ++ ++ LI ++ P G L L K +I D + Y +++
Sbjct: 72 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 128
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL I+RDL NIL++ + V + DF L+
Sbjct: 129 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 165
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K ++ LG G+ GSV + GE+ A+K ++ S + R E EI+
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 85
Query: 363 LDHPFLPTLYASFQTS--THICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVV 418
L H + ++ ++ LI ++ P G L L K +I D + Y +++
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 142
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL I+RDL NIL++ + V + DF L+
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K ++ LG G+ GSV + GE+ A+K ++ S + R E EI+
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 73
Query: 363 LDHPFLPTLYASFQTS--THICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVV 418
L H + ++ ++ LI ++ P G L L K +I D + Y +++
Sbjct: 74 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 130
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL I+RDL NIL++ + V + DF L+
Sbjct: 131 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 167
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K ++ LG G+ GSV + GE+ A+K ++ S + R E EI+
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 98
Query: 363 LDHPFLPTLYASFQTS--THICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVV 418
L H + ++ ++ LI ++ P G L L K +I D + Y +++
Sbjct: 99 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 155
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL I+RDL NIL++ + V + DF L+
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + TL + ++ ++T+ GGEL + +Q RE SA + + +EYL
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFT--ITKTVEYL 132
Query: 425 HCLGIIYRDLKPENIL 440
H G+++RDLKP NIL
Sbjct: 133 HAQGVVHRDLKPSNIL 148
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K ++ LG G+ GSV + GE+ A+K ++ S + R E EI+
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 85
Query: 363 LDHPFLPTLYASFQTS--THICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVV 418
L H + ++ ++ LI ++ P G L L K +I D + Y +++
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 142
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL I+RDL NIL++ + V + DF L+
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
F+ I LG G G V YA+K + + K+ E +++ L+H +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQY 63
Query: 368 LPTLYASF-------------QTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYA 414
+ YA++ + + + + ++C L+ L+ + + R++ R +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 415 AEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++ L Y+H GII+RDLKP NI + + +V + DF L+
Sbjct: 124 -QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 2/170 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ +F+ ++ +G G G V+ + GE+ A+K + A E ++ L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN 59
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + L T + L+ + +L +D + + Y +++ GL +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H +++RDLKP+N+L+ +G + L DF L+ + + H V +Y
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
F+ I LG G G V YA+K + + K+ E +++ L+H +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVXLLASLNHQY 63
Query: 368 LPTLYASF-------------QTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYA 414
+ YA++ + + + + ++C L+ L+ + + R++ R +
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 415 AEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++ L Y+H GII+R+LKP NI + + +V + DF L+
Sbjct: 124 -QILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA 163
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 24/184 (13%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAM------EKSVMLNRNKVHRACIEREIMSLLDHPF 367
+G G +G+V+ G+ A++ M +K +++N V R I++ LD
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD--- 85
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA--EVVIGLEYLH 425
S+ + ++ ++ GG L ++ + M D + A E + LE+LH
Sbjct: 86 ------SYLVGDELWVVMEYLAGGSLTDVVTETCM-----DEGQIAAVCRECLQALEFLH 134
Query: 426 CLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKWLTGYF 485
+I+R++K +NILL DG V LTDF F P+ + + G + M +
Sbjct: 135 SNQVIHRNIKSDNILLGMDGSVKLTDF--GFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 192
Query: 486 TYVP 489
Y P
Sbjct: 193 AYGP 196
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
++ +G G G VHL ++ A+K + + M + + A E+M L HP L
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIEEA----EVMMKLSHPKLVQ 66
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
LY ICL+ +F G L L Q +F ++ +V G+ YL +I
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEASVI 125
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDL N L+ ++ + ++DF ++
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMT 150
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS---LLD 364
F ++ +G G+ GSV + G +YA+K +K + V RE+ + L
Sbjct: 9 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA---GSVDEQNALREVYAHAVLGQ 65
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDK--QPMKIFREDSARFYAAEVVIGLE 422
H + ++++ H+ + ++C GG L + + + M F+E + +V GL
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 423 YLHCLGIIYRDLKPENILLQK 443
Y+H + +++ D+KP NI + +
Sbjct: 126 YIHSMSLVHMDIKPSNIFISR 146
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 5/173 (2%)
Query: 284 KRDNSSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
KRDN+ + +++ G L ++ +KP+G G G V A+K + +
Sbjct: 5 KRDNNFY-SVE--IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMK 403
N+ RA E +M +++H + L F + D EL Q ++
Sbjct: 62 Q-NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 404 I-FREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ + + +++ G+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ + T + ++T +C G L+ L K F A + G++YLH II
Sbjct: 95 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSII 153
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTS-----------------CKPQVF-------- 465
+RDLK NI L +D V + DF L+ + S P+V
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 466 -YHAHVNGFYFIMYKWLTGYFTY 487
+ + V F ++Y+ +TG Y
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLPY 236
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS---LLD 364
F ++ +G G+ GSV + G +YA+K +K + V RE+ + L
Sbjct: 11 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA---GSVDEQNALREVYAHAVLGQ 67
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDK--QPMKIFREDSARFYAAEVVIGLE 422
H + ++++ H+ + ++C GG L + + + M F+E + +V GL
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 423 YLHCLGIIYRDLKPENILLQK 443
Y+H + +++ D+KP NI + +
Sbjct: 128 YIHSMSLVHMDIKPSNIFISR 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS---LLD 364
F ++ +G G+ GSV + G +YA+K +K + V RE+ + L
Sbjct: 11 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA---GSVDEQNALREVYAHAVLGQ 67
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDK--QPMKIFREDSARFYAAEVVIGLE 422
H + ++++ H+ + ++C GG L + + + M F+E + +V GL
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 423 YLHCLGIIYRDLKPENILLQK 443
Y+H + +++ D+KP NI + +
Sbjct: 128 YIHSMSLVHMDIKPSNIFISR 148
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ + T + ++T +C G L+ L K F A + G++YLH II
Sbjct: 96 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSII 154
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTS-----------------CKPQVF-------- 465
+RDLK NI L +D V + DF L+ + S P+V
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 466 -YHAHVNGFYFIMYKWLTGYFTY 487
+ + V F ++Y+ +TG Y
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPY 237
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI--MSLLD 364
FK ++ LG G +V+ +G + + K V L+ + + REI M L
Sbjct: 6 QFKQLEKLGNGTYATVY----KGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPM----KIFREDSARFYAAEVVIG 420
H + LY T + L+ +F +L +D + + + + +++ +++ G
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L + H I++RDLKP+N+L+ K G + L DF L+
Sbjct: 121 LAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA 155
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
++ +G G G VHL ++ A+K + + M + + A E+M L HP L
Sbjct: 15 VQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIEEA----EVMMKLSHPKLVQ 69
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
LY ICL+ +F G L L Q +F ++ +V G+ YL +I
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVI 128
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDL N L+ ++ + ++DF ++
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMT 153
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS---LLD 364
F ++ +G G+ GSV + G +YA+K +K + V RE+ + L
Sbjct: 13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA---GSVDEQNALREVYAHAVLGQ 69
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDK--QPMKIFREDSARFYAAEVVIGLE 422
H + ++++ H+ + ++C GG L + + + M F+E + +V GL
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 423 YLHCLGIIYRDLKPENILLQK 443
Y+H + +++ D+KP NI + +
Sbjct: 130 YIHSMSLVHMDIKPSNIFISR 150
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 27/143 (18%)
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ + T+ + ++T +C G L+ L K F A + G++YLH II
Sbjct: 68 LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTS-----------------CKPQVF-------- 465
+RDLK NI L +D V + DF L+ + S P+V
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 466 -YHAHVNGFYFIMYKWLTGYFTY 487
+ + V F ++Y+ +TG Y
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPY 209
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMK-AMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
K +G G G V+ +L +GEL A+K ++ NR E +IM LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIVR 77
Query: 371 LYASFQTS------THICLITDFCPGGELFALLD----KQPMKIFREDSARFYAAEVVIG 420
L F +S ++ L+ D+ P KQ + + + Y ++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVI---YVKLYMYQLFRS 134
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVV-LTDF 452
L Y+H GI +RD+KP+N+LL D V+ L DF
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEK--SVMLNRNKVHRACIEREIMSLLDH 365
+ ++P+G G GSV + A+K + + +++ + +R E ++ L H
Sbjct: 30 LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR---ELRLLKHLKH 86
Query: 366 PFLPTLYASFQTSTHI------CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
+ L F +T I L+T G +L ++ Q + ++ +F +++
Sbjct: 87 ENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQALS---DEHVQFLVYQLLR 142
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
GL+Y+H GII+RDLKP N+ + +D + + DF L+
Sbjct: 143 GLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
++ ++P+G G G+V G A+K + + + RA E ++ + H
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMRHEN 85
Query: 368 LPTLYASFQTSTHICLITDF---CP--GGELFALLDKQPMKIFREDSARFYAAEVVIGLE 422
+ L F + TDF P G +L L+ + + ED +F +++ GL
Sbjct: 86 VIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLG---EDRIQFLVYQMLKGLR 142
Query: 423 YLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+H GII+RDLKP N+ + +D + + DF L+
Sbjct: 143 YIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
++ +G G G VHL ++ A+K + + M + + A E+M L HP L
Sbjct: 10 VQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIEEA----EVMMKLSHPKLVQ 64
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
LY ICL+ +F G L L Q +F ++ +V G+ YL +I
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVI 123
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDL N L+ ++ + ++DF ++
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMT 148
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ + T ++ ++T +C G L+ L Q K F+ A + G++YLH II
Sbjct: 96 LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAKNII 154
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTS 459
+RD+K NI L + V + DF L+ + S
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKS 183
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
++ +G G G VHL ++ A+K + + M + + A E+M L HP L
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIEEA----EVMMKLSHPKLVQ 66
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
LY ICL+ +F G L L Q +F ++ +V G+ YL +I
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVI 125
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDL N L+ ++ + ++DF ++
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMT 150
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ + T + ++T +C G L+ L K F A + G++YLH II
Sbjct: 70 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSII 128
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTS-----------------CKPQVF-------- 465
+RDLK NI L +D V + DF L+ + S P+V
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 466 -YHAHVNGFYFIMYKWLTGYFTY 487
+ + V F ++Y+ +TG Y
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLPY 211
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ + T + ++T +C G L+ L K F A + G++YLH II
Sbjct: 73 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSII 131
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTS-----------------CKPQVF-------- 465
+RDLK NI L +D V + DF L+ + S P+V
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 466 -YHAHVNGFYFIMYKWLTGYFTY 487
+ + V F ++Y+ +TG Y
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPY 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ + T + ++T +C G L+ L K F A + G++YLH II
Sbjct: 73 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSII 131
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTS-----------------CKPQVF-------- 465
+RDLK NI L +D V + DF L+ + S P+V
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 466 -YHAHVNGFYFIMYKWLTGYFTY 487
+ + V F ++Y+ +TG Y
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPY 214
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 74
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 75 DNPHVCRLLGICLTST-VQLITQLMPFGXLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 132
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 176
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K ++ LG G+ GSV + GE+ A+K ++ S + R E EI+
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 68
Query: 363 LDHPFLPTLYASFQTS--THICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVV 418
L H + ++ ++ LI ++ P G L L K +I D + Y +++
Sbjct: 69 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 125
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL I+R+L NIL++ + V + DF L+
Sbjct: 126 KGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT 162
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 86/214 (40%), Gaps = 53/214 (24%)
Query: 249 TAENVNEAVRELPDANLRPEDLWAIHSQPVFPRPHKRDNSSWIAIQKITGSGEKIGLHHF 308
T E+ NEAVRE K + S + I+++ G+GE
Sbjct: 15 TFEDPNEAVREFA----------------------KEIDISCVKIEQVIGAGE------- 45
Query: 309 KPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
G+ S HL +L G E++ KS + + E IM DHP +
Sbjct: 46 -------FGEVCSGHL-KLPGKREIFVAIKTLKSGYTEKQR-RDFLSEASIMGQFDHPNV 96
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVV-------IGL 421
L ST + +IT+F G L + L R++ +F ++V G+
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFL--------RQNDGQFTVIQLVGMLRGIAAGM 148
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+YL + ++RDL NIL+ + ++DF LS
Sbjct: 149 KYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS 182
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ + T + ++T +C G L+ L K F A + G++YLH II
Sbjct: 68 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTS-----------------CKPQVF-------- 465
+RDLK NI L +D V + DF L+ + S P+V
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 466 -YHAHVNGFYFIMYKWLTGYFTY 487
+ + V F ++Y+ +TG Y
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V A+K + + N+ RA E +M ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKXVN 81
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEY 423
H + +L F + D EL Q +++ + + +++ G+++
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKH 141
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Query: 296 ITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACI 355
I G + ++ + + +G G G V + + G + A+K M +S NK R +
Sbjct: 15 IGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENK--RILM 72
Query: 356 EREI-MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYA 414
+ ++ + D P++ + +F T+T + + + G L K+ E
Sbjct: 73 DLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMT 130
Query: 415 AEVVIGLEYL-HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V L YL G+I+RD+KP NILL + G + L DF +S
Sbjct: 131 VAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 284 KRDNSSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
KRDN+ + +++ G L ++ +KP+G G G V A+K + +
Sbjct: 5 KRDNNFY-SVE--IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMK 403
N+ RA E +M ++H + L F + D EL Q ++
Sbjct: 62 Q-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 404 I-FREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ + + +++ G+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V A+K + + N+ RA E +M ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKXVN 81
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEY 423
H + +L F + D EL Q +++ + + +++ G+++
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL--LDH 365
K I+ LG G G V L G+ + KS+ H A +++EI L L H
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH 82
Query: 366 PFLPTLYASFQT---STHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLE 422
+ Y T I LI +F P G L L K KI + + YA ++ G++
Sbjct: 83 ENI-VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGMD 140
Query: 423 YLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
YL ++RDL N+L++ + V + DF L+
Sbjct: 141 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT 173
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V A+K + + N+ RA E +M ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVN 81
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEY 423
H + +L F + D EL Q +++ + + +++ G+++
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKH 141
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-KVH-RACIEREIMSLLDHPFLPTL 371
LG G G V + + E +A+K ++ R ++H RA I+ ++D +
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQCPHIVRIVD------V 123
Query: 372 YASFQTSTHICLITDFC-PGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
Y + LI C GGELF+ + + + F E A + ++YLH + I
Sbjct: 124 YENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIA 183
Query: 431 YRDLKPENILL---QKDGHVVLTDFDLSFMTS 459
+RD+KPEN+L + + + LTDF + T+
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 14/157 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
H K ++ LG G+ GSV + GE+ A+K ++ S + R E EI+
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 70
Query: 363 LDHPFLPTLYASFQTS--THICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVV 418
L H + ++ ++ LI ++ P G L L +I D + Y +++
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI---DHIKLLQYTSQIC 127
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL I+RDL NIL++ + V + DF L+
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMK-AMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
K +G G G V+ +L +GEL A+K ++ NR E +IM LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIVR 77
Query: 371 LYASFQTS------THICLITDFCPGGELFALLD----KQPMKIFREDSARFYAAEVVIG 420
L F +S ++ L+ D+ P KQ + + + Y ++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQLFRS 134
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVV-LTDF 452
L Y+H GI +RD+KP+N+LL D V+ L DF
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V A+K + + N+ RA E +M ++
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVN 74
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEY 423
H + +L F + D EL Q +++ + + +++ G+++
Sbjct: 75 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKH 134
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 166
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMK-AMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
K +G G G V+ +L +GEL A+K ++ NR E +IM LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIVR 77
Query: 371 LYASFQTS------THICLITDFCPGGELFALLD----KQPMKIFREDSARFYAAEVVIG 420
L F +S ++ L+ D+ P KQ + + + Y ++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQLFRS 134
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVV-LTDF 452
L Y+H GI +RD+KP+N+LL D V+ L DF
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
F ++ +G G G+V+ E+ A+K M S + K E + L HP
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFAL-LDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+ L+ ++C G L + K+P++ E +A + A + GL YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV-EIAAVTHGA--LQGLAYLHS 133
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDF 452
+I+RD+K NILL + G V L DF
Sbjct: 134 HNMIHRDVKAGNILLSEPGLVKLGDF 159
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 363 LDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIG 420
L H + SF + I + + PGG L ALL + P+K E + FY +++ G
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKD-NEQTIGFYTKQILEG 134
Query: 421 LEYLHCLGIIYRDLKPENILLQK-DGHVVLTDFDLS 455
L+YLH I++RD+K +N+L+ G + ++DF S
Sbjct: 135 LKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTS 170
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL--LDH 365
K I+ LG G G V L G+ + KS+ H A +++EI L L H
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH 70
Query: 366 PFLPTLYASFQT---STHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLE 422
+ Y T I LI +F P G L L K KI + + YA ++ G++
Sbjct: 71 ENI-VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGMD 128
Query: 423 YLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
YL ++RDL N+L++ + V + DF L+
Sbjct: 129 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT 161
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 27/143 (18%)
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ + T + ++T +C G L+ L K F A + G++YLH II
Sbjct: 96 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSII 154
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTS-----------------CKPQVF-------- 465
+RDLK NI L +D V + DF L+ S P+V
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 466 -YHAHVNGFYFIMYKWLTGYFTY 487
+ + V F ++Y+ +TG Y
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPY 237
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 285 RDNSSWIAIQKITGSG-EKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
+D S + G G ++ + K +G G G V+ +L +GEL A+K V
Sbjct: 26 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KV 81
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------THICLITDFCPGGELFALL 397
+ ++ +R E +IM LDH + L F +S ++ L+ D+ P
Sbjct: 82 LQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR 138
Query: 398 D----KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTDF 452
KQ + + + Y ++ L Y+H GI +RD+KP+N+LL D V+ L DF
Sbjct: 139 HYSRAKQTLPVIY---VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 195
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 285 RDNSSWIAIQKITGSG-EKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
+D S + G G ++ + K +G G G V+ +L +GEL A+K V
Sbjct: 17 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KV 72
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------THICLITDFCPGGELFALL 397
+ ++ +R E +IM LDH + L F +S ++ L+ D+ P
Sbjct: 73 LQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR 129
Query: 398 D----KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTDF 452
KQ + + + Y ++ L Y+H GI +RD+KP+N+LL D V+ L DF
Sbjct: 130 HYSRAKQTLPVI---YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 186
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 285 RDNSSWIAIQKITGSG-EKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
+D S + G G ++ + K +G G G V+ +L +GEL A+K V
Sbjct: 11 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KV 66
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------THICLITDFCPGGELFALL 397
+ ++ +R E +IM LDH + L F +S ++ L+ D+ P
Sbjct: 67 LQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR 123
Query: 398 D----KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTDF 452
KQ + + + Y ++ L Y+H GI +RD+KP+N+LL D V+ L DF
Sbjct: 124 HYSRAKQTLPVI---YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 180
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 285 RDNSSWIAIQKITGSG-EKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMK-AMEKS 342
+D S + G G ++ + K +G G G V+ +L +GEL A+K ++
Sbjct: 6 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK 65
Query: 343 VMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------THICLITDFCPGGELFAL 396
NR E +IM LDH + L F +S ++ L+ D+ P
Sbjct: 66 RFKNR--------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 117
Query: 397 LD----KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTD 451
KQ + + + Y ++ L Y+H GI +RD+KP+N+LL D V+ L D
Sbjct: 118 RHYSRAKQTLPVI---YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCD 174
Query: 452 F 452
F
Sbjct: 175 F 175
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 6/145 (4%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
++ +G G G VHL ++ A+K +++ M + + A E+M L HP L
Sbjct: 32 VQEIGSGQFGLVHLGYWLNKDKV-AIKTIKEGSMSEDDFIEEA----EVMMKLSHPKLVQ 86
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
LY ICL+ +F G L L Q +F ++ +V G+ YL +I
Sbjct: 87 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVI 145
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDL N L+ ++ + ++DF ++
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMT 170
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI-MSLLDHP 366
+PI LG G G V +G++ A+K + +V N + R + +I +D P
Sbjct: 36 LEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATV--NSQEQKRLLXDLDISXRTVDCP 93
Query: 367 FLPTLYASF--QTSTHICL-ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
F T Y + + IC + D ++DK + ED A +V LE+
Sbjct: 94 FTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKG--QTIPEDILGKIAVSIVKALEH 151
Query: 424 LHC-LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
LH L +I+RD+KP N+L+ G V DF +S
Sbjct: 152 LHSKLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 285 RDNSSWIAIQKITGSG-EKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
+D S + G G ++ + K +G G G V+ +L +GEL A+K V
Sbjct: 10 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KV 65
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------THICLITDFCPGGELFALL 397
+ ++ +R E +IM LDH + L F +S ++ L+ D+ P
Sbjct: 66 LQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR 122
Query: 398 D----KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTDF 452
KQ + + + Y ++ L Y+H GI +RD+KP+N+LL D V+ L DF
Sbjct: 123 HYSRAKQTLPVI---YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 24/181 (13%)
Query: 285 RDNSSWIAIQKITGSG-EKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
+D S + G G ++ + K +G G G V+ +L +GEL A+K V
Sbjct: 32 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KV 87
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------THICLITDFCPGGELFALL 397
+ ++ +R E +IM LDH + L F +S ++ L+ D+ P ++ +
Sbjct: 88 LQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 143
Query: 398 -----DKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTD 451
KQ + + + Y ++ L Y+H GI +RD+KP+N+LL D V+ L D
Sbjct: 144 RHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCD 200
Query: 452 F 452
F
Sbjct: 201 F 201
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 24/181 (13%)
Query: 285 RDNSSWIAIQKITGSG-EKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
+D S + G G ++ + K +G G G V+ +L +GEL A+K V
Sbjct: 32 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KV 87
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------THICLITDFCPGGELFALL 397
+ ++ +R E +IM LDH + L F +S ++ L+ D+ P ++ +
Sbjct: 88 LQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 143
Query: 398 -----DKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTD 451
KQ + + + Y ++ L Y+H GI +RD+KP+N+LL D V+ L D
Sbjct: 144 RHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCD 200
Query: 452 F 452
F
Sbjct: 201 F 201
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEK--SVMLNRNKVHRACIEREIMSLLDH 365
+ ++P+G G GSV + A+K + + +++ + +R E ++ L H
Sbjct: 30 LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR---ELRLLKHLKH 86
Query: 366 PFLPTLYASFQTSTHI------CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
+ L F +T I L+T G +L ++ Q + ++ +F +++
Sbjct: 87 ENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALS---DEHVQFLVYQLLR 142
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
GL+Y+H GII+RDLKP N+ + +D + + DF L+
Sbjct: 143 GLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 331 GELYAMKAMEKSVMLNRNKVHRACIERE--IMSLLDHPFLPTLYASFQTSTHICLITDFC 388
G+ +A+K ++ + + + ++RE I +L HP + L ++ + + ++ +F
Sbjct: 49 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108
Query: 389 PGGEL-FALLDKQPMK-IFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILL---QK 443
G +L F ++ + ++ E A Y +++ L Y H II+RD+KPEN+LL +
Sbjct: 109 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKEN 168
Query: 444 DGHVVLTDFDLS 455
V L DF ++
Sbjct: 169 SAPVKLGDFGVA 180
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKSQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
++ GL+Y+H II+RDLKP N+ + +D + + DF L
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGL 171
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 285 RDNSSWIAIQKITGSG-EKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
+D S + G G ++ + K +G G G V+ +L +GEL A+K V
Sbjct: 10 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KV 65
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------THICLITDFCPGGELFALL 397
+ ++ +R E +IM LDH + L F +S ++ L+ D+ P
Sbjct: 66 LQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR 122
Query: 398 D----KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTDF 452
KQ + + + Y ++ L Y+H GI +RD+KP+N+LL D V+ L DF
Sbjct: 123 HYSRAKQTLPVI---YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 24/181 (13%)
Query: 285 RDNSSWIAIQKITGSG-EKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
+D S + G G ++ + K +G G G V+ +L +GEL A+K V
Sbjct: 34 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KV 89
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------THICLITDFCPGGELFALL 397
+ ++ +R E +IM LDH + L F +S ++ L+ D+ P ++ +
Sbjct: 90 LQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 145
Query: 398 -----DKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTD 451
KQ + + + Y ++ L Y+H GI +RD+KP+N+LL D V+ L D
Sbjct: 146 RHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCD 202
Query: 452 F 452
F
Sbjct: 203 F 203
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 27/143 (18%)
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ + T + ++T +C G L+ L K F A + G++YLH II
Sbjct: 88 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSII 146
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTS-----------------CKPQVF-------- 465
+RDLK NI L +D V + DF L+ S P+V
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 466 -YHAHVNGFYFIMYKWLTGYFTY 487
+ + V F ++Y+ +TG Y
Sbjct: 207 SFQSDVYAFGIVLYELMTGQLPY 229
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
F ++ +G G G+V+ E+ A+K M S + K E + L HP
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFAL-LDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+ L+ ++C G L + K+P++ E +A + A + GL YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV-EIAAVTHGA--LQGLAYLHS 172
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDF 452
+I+RD+K NILL + G V L DF
Sbjct: 173 HNMIHRDVKAGNILLSEPGLVKLGDF 198
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 24/181 (13%)
Query: 285 RDNSSWIAIQKITGSG-EKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
+D S + G G ++ + K +G G G V+ +L +GEL A+K V
Sbjct: 36 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KV 91
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------THICLITDFCPGGELFALL 397
+ ++ +R E +IM LDH + L F +S ++ L+ D+ P ++ +
Sbjct: 92 LQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 147
Query: 398 -----DKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTD 451
KQ + + + Y ++ L Y+H GI +RD+KP+N+LL D V+ L D
Sbjct: 148 RHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCD 204
Query: 452 F 452
F
Sbjct: 205 F 205
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKXQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 172
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 363 LDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIG 420
L H + SF + I + + PGG L ALL + P+K E + FY +++ G
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKD-NEQTIGFYTKQILEG 120
Query: 421 LEYLHCLGIIYRDLKPENILLQK-DGHVVLTDFDLS 455
L+YLH I++RD+K +N+L+ G + ++DF S
Sbjct: 121 LKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTS 156
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V A+K + + N+ RA E +M ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKXVN 81
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFR----EDSARFYAAEVVIG 420
H + +L F + +F + L+D ++ + + + +++ G
Sbjct: 82 HKNIISLLNVFTPQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 138
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 24/181 (13%)
Query: 285 RDNSSWIAIQKITGSG-EKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
+D S + G G ++ + K +G G G V+ +L +GEL A+K V
Sbjct: 77 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KV 132
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------THICLITDFCPGGELFALL 397
+ ++ +R E +IM LDH + L F +S ++ L+ D+ P ++ +
Sbjct: 133 LQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA 188
Query: 398 -----DKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTD 451
KQ + + + Y ++ L Y+H GI +RD+KP+N+LL D V+ L D
Sbjct: 189 RHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCD 245
Query: 452 F 452
F
Sbjct: 246 F 246
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
+ +KPLGCG G V + A+K K V+ + V A E +I+ LDH
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIK---KIVLTDPQSVKHALREIKIIRRLDHDN 69
Query: 368 LPTLY--------------ASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFY 413
+ ++ S + ++ ++ +L +L++ P+ E+ AR +
Sbjct: 70 IVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPL---LEEHARLF 125
Query: 414 AAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTDFDLS 455
+++ GL+Y+H +++RDLKP N+ + + V+ + DF L+
Sbjct: 126 MYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 84
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 85 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 142
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 186
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 77
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 78 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 135
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 179
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 99
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 100 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 157
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 201
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
F I+ +G G G V L + + YA+K + R+ A I ++I + +
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNN 96
Query: 368 LPTLY-ASFQTSTHICLITDFCP-GGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH 425
Y F H+CLI F P G L+ ++ + F + + Y E++ L YL
Sbjct: 97 NIVKYHGKFMYYDHMCLI--FEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR 154
Query: 426 CLGIIYRDLKPENILL 441
+ + + DLKPENILL
Sbjct: 155 KMSLTHTDLKPENILL 170
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 81
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 82 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 139
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 183
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 74
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 75 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 132
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 176
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 76
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 77 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 134
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 178
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 80
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 81 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 138
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 182
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 74
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 75 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 132
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 176
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMK-AMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
K +G G G V+ +L +GEL A+K ++ NR E +IM LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 77
Query: 371 LYASFQTS------THICLITDFCPGGELFALLD----KQPMKIFREDSARFYAAEVVIG 420
L F +S ++ L+ D+ P KQ + + + Y ++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQLFRS 134
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVV-LTDF 452
L Y+H GI +RD+KP+N+LL D V+ L DF
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMK-AMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
K +G G G V+ +L +GEL A+K ++ NR E +IM LDH +
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 78
Query: 371 LYASFQTS------THICLITDFCPGGELFALLD----KQPMKIFREDSARFYAAEVVIG 420
L F +S ++ L+ D+ P KQ + + + Y ++
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQLFRS 135
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVV-LTDF 452
L Y+H GI +RD+KP+N+LL D V+ L DF
Sbjct: 136 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 168
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 77
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 78 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 135
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 179
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMK-AMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
K +G G G V+ +L +GEL A+K ++ NR E +IM LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 77
Query: 371 LYASFQTS------THICLITDFCPGGELFALLD----KQPMKIFREDSARFYAAEVVIG 420
L F +S ++ L+ D+ P KQ + + + Y ++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQLFRS 134
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVV-LTDF 452
L Y+H GI +RD+KP+N+LL D V+ L DF
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 68
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 69 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 126
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 170
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 77
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 78 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 135
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 179
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 11/176 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-KVH-RACIEREIMSLLDHPFLPTL 371
LG G G V + + E +A+K ++ R ++H RA I+ ++D L
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 83
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
YA + + ++ + GGELF+ + + + F E A + ++YLH + I +
Sbjct: 84 YAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 432 RDLKPENILL---QKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKWLTGY 484
RD+KPEN+L + + + LTDF + T+ + + + IMY L GY
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAKETTGE-KYDKSCDMWSLGVIMYILLCGY 195
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMK-AMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
K +G G G V+ +L +GEL A+K ++ NR E +IM LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 77
Query: 371 LYASFQTS------THICLITDFCPGGELFALLD----KQPMKIFREDSARFYAAEVVIG 420
L F +S ++ L+ D+ P KQ + + + Y ++
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQLFRS 134
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVV-LTDF 452
L Y+H GI +RD+KP+N+LL D V+ L DF
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V G A+K + + N+ RA E ++ ++
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCVN 81
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFR----EDSARFYAAEVVIG 420
H + +L F + +F + L+D ++ + + +++ G
Sbjct: 82 HKNIISLLNVFTPQK---TLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCG 138
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC 460
+++LH GII+RDLKP NI+++ D + + DF L+ T+C
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAC 177
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E IM DHP + L S + ++T++ G L + L R+ A+F
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--------RKHDAQFTVI 147
Query: 416 EVV-------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFY 466
++V G++YL +G ++RDL NIL+ + ++DF LS + P+ Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMK-AMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
K +G G G V+ +L +GEL A+K ++ NR E +IM LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 77
Query: 371 LYASFQTS------THICLITDFCPGGELFALLD----KQPMKIFREDSARFYAAEVVIG 420
L F +S ++ L+ D+ P KQ + + + Y ++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQLFRS 134
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVV-LTDF 452
L Y+H GI +RD+KP+N+LL D V+ L DF
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 23/153 (15%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTL 371
K +G G G V+ +L +GEL A+K V+ ++ +R E +IM LDH + L
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNR---ELQIMRKLDHCNIVRL 83
Query: 372 YASFQTS------THICLITDFCPGGELFALL-----DKQPMKIFREDSARFYAAEVVIG 420
F +S ++ L+ D+ P ++ + KQ + + + Y ++
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY---VKLYMYQLFRS 139
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVV-LTDF 452
L Y+H GI +RD+KP+N+LL D V+ L DF
Sbjct: 140 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 172
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 21/162 (12%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 86
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 87 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 139
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
++ GL+Y+H II+RDLKP N+ + +D + + DF L+ T
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 181
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 27/143 (18%)
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
L+ + T + ++T +C G L+ L K F A + G++YLH II
Sbjct: 68 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTS-----------------CKPQVF-------- 465
+RDLK NI L +D V + DF L+ S P+V
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 466 -YHAHVNGFYFIMYKWLTGYFTY 487
+ + V F ++Y+ +TG Y
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V A+K + + N+ RA E +M ++
Sbjct: 22 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVN 80
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFR----EDSARFYAAEVVIG 420
H + +L F + +F + L+D ++ + + + +++ G
Sbjct: 81 HKNIISLLNVFTPQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 137
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 138 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 172
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 21/152 (13%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTL 371
K +G G G V+ +L +GEL A+K V+ ++ +R E +IM LDH + L
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNR---ELQIMRKLDHCNIVRL 82
Query: 372 YASFQTS------THICLITDFCPGGELFALLD----KQPMKIFREDSARFYAAEVVIGL 421
F +S ++ L+ D+ P KQ + + + Y ++ L
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI---YVKLYMYQLFRSL 139
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVV-LTDF 452
Y+H GI +RD+KP+N+LL D V+ L DF
Sbjct: 140 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 171
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKXQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 86
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 87 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 139
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 178
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 82
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 83 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 135
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 174
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V A+K + + N+ RA E +M ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVN 81
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFR----EDSARFYAAEVVIG 420
H + +L F + +F + L+D ++ + + + +++ G
Sbjct: 82 HKNIISLLNVFTPQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 138
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 284 KRDNSSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
KRDN+ + +++ G L ++ +KP+G G G V A+K + +
Sbjct: 5 KRDNNFY-SVE--IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMK 403
N+ RA E +M ++H + L F + D EL Q ++
Sbjct: 62 Q-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 404 I-FREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ + + +++ G+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V A+K + + N+ RA E +M ++
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVN 74
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFR----EDSARFYAAEVVIG 420
H + +L F + +F + L+D ++ + + + +++ G
Sbjct: 75 HKNIISLLNVFTPQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 131
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 21/185 (11%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFI 476
++ GL+Y+H II+RDLKP N+ + +D + + DF L+ T + F I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEI 193
Query: 477 MYKWL 481
M W+
Sbjct: 194 MLNWM 198
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E IM DHP + L S + ++T++ G L + L R+ A+F
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--------RKHDAQFTVI 118
Query: 416 EVV-------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFY 466
++V G++YL +G ++RDL NIL+ + ++DF LS + P+ Y
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQ 442
++ ++C G + +LD P K F A Y +++ GLEYLH GI+++D+KP N+LL
Sbjct: 85 MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT 143
Query: 443 KDGHVVLTDFDLS 455
G + ++ ++
Sbjct: 144 TGGTLKISALGVA 156
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V A+K + + N+ RA E +M ++
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVN 75
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFR----EDSARFYAAEVVIG 420
H + +L F + +F + L+D ++ + + + +++ G
Sbjct: 76 HKNIISLLNVFTPQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 132
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + K ++ +H RE
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPF---QSIIHAKRTYRELRLLKHMKH 92
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 93 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 145
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEK--SVMLNRNKVHRACIEREIMSLLDHPFL 368
++P+G G GSV + A+K + + +++ + +R E ++ L H +
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR---ELRLLKHLKHENV 81
Query: 369 PTLYASFQTSTHI------CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLE 422
L F +T I L+T G +L ++ Q + ++ +F +++ GL+
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALS---DEHVQFLVYQLLRGLK 137
Query: 423 YLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+H GII+RDLKP N+ + +D + + DF L+
Sbjct: 138 YIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA 170
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V A+K + + N+ RA E +M ++
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVN 119
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFR----EDSARFYAAEVVIG 420
H + +L F + +F + L+D ++ + + + +++ G
Sbjct: 120 HKNIISLLNVFTPQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 176
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V A+K + + N+ RA E +M ++
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVN 82
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFR----EDSARFYAAEVVIG 420
H + +L F + +F + L+D ++ + + + +++ G
Sbjct: 83 HKNIISLLNVFTPQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 139
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V A+K + + N+ RA E +M ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVN 81
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFR----EDSARFYAAEVVIG 420
H + +L F + +F + L+D ++ + + + +++ G
Sbjct: 82 HKNIISLLNVFTPQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 138
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 21/185 (11%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFI 476
++ GL+Y+H II+RDLKP N+ + +D + + DF L+ T + F I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEI 193
Query: 477 MYKWL 481
M W+
Sbjct: 194 MLNWM 198
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V A+K + + N+ RA E +M ++
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVN 82
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFR----EDSARFYAAEVVIG 420
H + +L F + +F + L+D ++ + + + +++ G
Sbjct: 83 HKNIISLLNVFTPQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 139
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V A+K + + N+ RA E +M ++
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVN 75
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFR----EDSARFYAAEVVIG 420
H + +L F + +F + L+D ++ + + + +++ G
Sbjct: 76 HKNIISLLNVFTPQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 132
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 76
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 77 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 129
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 21/185 (11%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 76
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 77 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 129
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFI 476
++ GL+Y+H II+RDLKP N+ + +D + + DF L+ T + F I
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEI 189
Query: 477 MYKWL 481
M W+
Sbjct: 190 MLNWM 194
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 21/162 (12%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 100
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 101 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 153
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
++ GL+Y+H II+RDLKP N+ + +D + + DF L+ T
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 195
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E IM DHP + L S + ++T++ G L + L R+ A+F
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--------RKHDAQFTVI 135
Query: 416 EVV-------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFY 466
++V G++YL +G ++RDL NIL+ + ++DF LS + P+ Y
Sbjct: 136 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 193
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 71
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 72 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAEGMNY 129
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 173
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 21/162 (12%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 99
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 100 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 152
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
++ GL+Y+H II+RDLKP N+ + +D + + DF L+ T
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 194
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V A+K + + N+ RA E +M ++
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVN 119
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFR----EDSARFYAAEVVIG 420
H + +L F + +F + L+D ++ + + + +++ G
Sbjct: 120 HKNIISLLNVFTPQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 176
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 21/162 (12%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 100
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 101 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 153
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
++ GL+Y+H II+RDLKP N+ + +D + + DF L+ T
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 195
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 21/162 (12%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 90
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 91 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 143
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
++ GL+Y+H II+RDLKP N+ + +D + + DF L+ T
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 185
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E IM DHP + L S + ++T++ G L + L R+ A+F
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--------RKHDAQFTVI 147
Query: 416 EVV-------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFY 466
++V G++YL +G ++RDL NIL+ + ++DF LS + P+ Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E IM DHP + L S + ++T++ G L + L R+ A+F
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--------RKHDAQFTVI 147
Query: 416 EVV-------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFY 466
++V G++YL +G ++RDL NIL+ + ++DF LS + P+ Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E IM DHP + L S + ++T++ G L + L R+ A+F
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--------RKHDAQFTVI 147
Query: 416 EVV-------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFY 466
++V G++YL +G ++RDL NIL+ + ++DF LS + P+ Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 85
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 86 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 138
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E IM DHP + L S + ++T++ G L + L R+ A+F
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--------RKHDAQFTVI 145
Query: 416 EVV-------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFY 466
++V G++YL +G ++RDL NIL+ + ++DF LS + P+ Y
Sbjct: 146 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 203
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E IM DHP + L S + ++T++ G L + L R+ A+F
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--------RKHDAQFTVI 147
Query: 416 EVV-------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFY 466
++V G++YL +G ++RDL NIL+ + ++DF LS + P+ Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN-------RNKVHRACIEREIMSLLDHP 366
LGCG+ GSV QG +Y M+ + V + + E +IM LD+P
Sbjct: 18 LGCGNFGSVR----QG---VYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 70
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
++ L Q + L+ + GG L L + +I + A +V +G++YL
Sbjct: 71 YIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH-QVSMGMKYLEE 128
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++RDL N+LL + ++DF LS
Sbjct: 129 KNFVHRDLAARNVLLVNRHYAKISDFGLS 157
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-KVH-RACIEREIMSLLDHPFLPTL 371
LG G G V + + E +A+K ++ R ++H RA I+ ++D L
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 83
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
YA + + ++ + GGELF+ + + + F E A + ++YLH + I +
Sbjct: 84 YAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 432 RDLKPENILL---QKDGHVVLTDFDL--------SFMTSCKPQVFYHAHVNG-------- 472
RD+KPEN+L + + + LTDF S T C + V G
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 473 ----FYFIMYKWLTGY 484
IMY L GY
Sbjct: 201 DMWSLGVIMYILLCGY 216
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 21/163 (12%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 87
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 88 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 140
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459
++ GL+Y+H II+RDLKP N+ + +D + + DF L+ T+
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 75
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LI P G L + + I + + ++ G+ Y
Sbjct: 76 DNPHVCRLLGICLTST-VQLIMQLMPFGXLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 133
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 177
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-KVH-RACIEREIMSLLDHPFLPTL 371
LG G G V + + E +A+K ++ R ++H RA I+ ++D L
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 127
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
YA + + ++ + GGELF+ + + + F E A + ++YLH + I +
Sbjct: 128 YAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 184
Query: 432 RDLKPENILL---QKDGHVVLTDFDL--------SFMTSCKPQVFYHAHVNG-------- 472
RD+KPEN+L + + + LTDF S T C + V G
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 473 ----FYFIMYKWLTGY 484
IMY L GY
Sbjct: 245 DMWSLGVIMYILLCGY 260
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-KVH-RACIEREIMSLLDHPFLPTL 371
LG G G V + + E +A+K ++ R ++H RA I+ ++D L
Sbjct: 76 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 133
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
YA + + ++ + GGELF+ + + + F E A + ++YLH + I +
Sbjct: 134 YAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 190
Query: 432 RDLKPENILL---QKDGHVVLTDFDL--------SFMTSCKPQVFYHAHVNG-------- 472
RD+KPEN+L + + + LTDF S T C + V G
Sbjct: 191 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 250
Query: 473 ----FYFIMYKWLTGY 484
IMY L GY
Sbjct: 251 DMWSLGVIMYILLCGY 266
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 298 GSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIER 357
GSG + + K ++ +G G+ G V L + +G A+K ++ N E
Sbjct: 4 GSGWALNMKELKLLQTIGKGEFGDVMLGDYRG--NKVAVKCIK-----NDATAQAFLAEA 56
Query: 358 EIMSLLDHPFLPTLYASF-QTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
+M+ L H L L + + ++T++ G L L + + D ++ +
Sbjct: 57 SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 116
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
V +EYL ++RDL N+L+ +D ++DF L+
Sbjct: 117 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 155
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 85
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 86 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 138
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 21/163 (12%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 87
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 88 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 140
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459
++ GL+Y+H II+RDLKP N+ + +D + + DF L+ T+
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 21/163 (12%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 87
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 88 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 140
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459
++ GL+Y+H II+RDLKP N+ + +D + + DF L+ T+
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV--MLNRNKVHRAC------IEREI 359
++ + P+G G GSV +G A+K + + +++ + +R +
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 112
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
+ LLD F P S + + L+T G +L ++ Q + +D +F +++
Sbjct: 113 IGLLD-VFTPA--TSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQILR 165
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 166 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 201
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V G A+K + + N+ RA E ++ ++
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCVN 79
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFR----EDSARFYAAEVVIG 420
H + +L F + +F + L+D ++ + + +++ G
Sbjct: 80 HKNIISLLNVFTPQK---TLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCG 136
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459
+++LH GII+RDLKP NI+++ D + + DF L+ S
Sbjct: 137 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS 175
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 91
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 92 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 144
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 183
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLA 172
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-KVH-RACIEREIMSLLDHPFLPTL 371
LG G G V + + E +A+K ++ R ++H RA I+ ++D L
Sbjct: 32 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 89
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
YA + + ++ + GGELF+ + + + F E A + ++YLH + I +
Sbjct: 90 YAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 146
Query: 432 RDLKPENILL---QKDGHVVLTDFDL--------SFMTSCKPQVFYHAHVNG-------- 472
RD+KPEN+L + + + LTDF S T C + V G
Sbjct: 147 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 206
Query: 473 ----FYFIMYKWLTGY 484
IMY L GY
Sbjct: 207 DMWSLGVIMYILLCGY 222
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 11/176 (6%)
Query: 284 KRDNSSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
KRDN+ + +++ G L ++ +KP+G G G V A+K + +
Sbjct: 5 KRDNNFY-SVE--IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMK 403
N+ RA E +M ++H + L F + +F + L+D +
Sbjct: 62 Q-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL---EEFQDVYIVMELMDANLCQ 117
Query: 404 IFR----EDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ + + + +++ G+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 11/176 (6%)
Query: 284 KRDNSSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
KRDN+ + +++ G L ++ +KP+G G G V A+K + +
Sbjct: 5 KRDNNFY-SVE--IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMK 403
N+ RA E +M ++H + L F + +F + L+D +
Sbjct: 62 Q-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL---EEFQDVYIVMELMDANLCQ 117
Query: 404 IFR----EDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ + + + +++ G+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-KVH-RACIEREIMSLLDHPFLPTL 371
LG G G V + + E +A+K ++ R ++H RA I+ ++D L
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 81
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
YA + + ++ + GGELF+ + + + F E A + ++YLH + I +
Sbjct: 82 YAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 432 RDLKPENILL---QKDGHVVLTDFDL--------SFMTSCKPQVFYHAHVNG-------- 472
RD+KPEN+L + + + LTDF S T C + V G
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 198
Query: 473 ----FYFIMYKWLTGY 484
IMY L GY
Sbjct: 199 DMWSLGVIMYILLCGY 214
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 29/174 (16%)
Query: 298 GSGEKIGLH--HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVH 351
G G+ H + K I+ LG G G V L G GE+ A+KA++ + H
Sbjct: 21 GPGDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA----DAGPQH 76
Query: 352 RACIEREIMSLLDHPFLPTLYASFQTSTHIC----------LITDFCPGGELFALLDKQP 401
R+ ++EI L TLY C L+ ++ P G L L +
Sbjct: 77 RSGWKQEI------DILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS 130
Query: 402 MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ + + +A ++ G+ YLH I+RDL N+LL D V + DF L+
Sbjct: 131 IGLAQ---LLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA 181
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-KVH-RACIEREIMSLLDHPFLPTL 371
LG G G V + + E +A+K ++ R ++H RA I+ ++D L
Sbjct: 30 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 87
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
YA + + ++ + GGELF+ + + + F E A + ++YLH + I +
Sbjct: 88 YAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 144
Query: 432 RDLKPENILL---QKDGHVVLTDFDL--------SFMTSCKPQVFYHAHVNG-------- 472
RD+KPEN+L + + + LTDF S T C + V G
Sbjct: 145 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 204
Query: 473 ----FYFIMYKWLTGY 484
IMY L GY
Sbjct: 205 DMWSLGVIMYILLCGY 220
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE----REIMSLL 363
K +K LG G G+V+ GE + K +LN +A +E IM+ +
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIK--ILNETTGPKANVEFMDEALIMASM 97
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
DHP L L + T I L+T P G L + + I + + ++ G+ Y
Sbjct: 98 DHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN-WCVQIAKGMMY 155
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L +++RDL N+L++ HV +TDF L+
Sbjct: 156 LEERRLVHRDLAARNVLVKSPNHVKITDFGLA 187
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 6/145 (4%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
IK LG G G V + G ++ A+K ++ M + + A +IM L H L
Sbjct: 14 IKRLGNGQFGEVWMGTWNGNTKV-AIKTLKPGTMSPESFLEEA----QIMKKLKHDKLVQ 68
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
LYA + I ++T++ G L L + + + AA+V G+ Y+ + I
Sbjct: 69 LYAVV-SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI 127
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDL+ NIL+ + DF L+
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLA 152
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-KVH-RACIEREIMSLLDHPFLPTL 371
LG G G V + + E +A+K ++ R ++H RA I+ ++D L
Sbjct: 31 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 88
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
YA + + ++ + GGELF+ + + + F E A + ++YLH + I +
Sbjct: 89 YAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 145
Query: 432 RDLKPENILL---QKDGHVVLTDFDL--------SFMTSCKPQVFYHAHVNG-------- 472
RD+KPEN+L + + + LTDF S T C + V G
Sbjct: 146 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 205
Query: 473 ----FYFIMYKWLTGY 484
IMY L GY
Sbjct: 206 DMWSLGVIMYILLCGY 221
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL--LDH 365
FK I+ +G G G V + + G+ Y +K R K + ERE+ +L LDH
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIK---------RVKYNNEKAEREVKALAKLDH 63
Query: 366 ----------------PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDS 409
P + +S + + + +FC G L ++K+ + +
Sbjct: 64 VNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 410 ARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK 461
A ++ G++Y+H +I RDLKP NI L V + DF L +TS K
Sbjct: 124 ALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGL--VTSLK 173
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVH--RACIEREIMSLLDHPFLPTL 371
LG G G V + G+ A+K + S + H +A I+ +LD +
Sbjct: 18 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILD------V 71
Query: 372 YASFQTSTHICLITDFC-PGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
Y + LI C GGELF+ + ++ + F E A ++ +++LH I
Sbjct: 72 YENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIA 131
Query: 431 YRDLKPENILL---QKDGHVVLTDFDLSFMTS 459
+RD+KPEN+L +KD + LTDF + T+
Sbjct: 132 HRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 163
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-KVH-RACIEREIMSLLDHPFLPTL 371
LG G G V + + E +A+K ++ R ++H RA I+ ++D L
Sbjct: 25 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 82
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
YA + + ++ + GGELF+ + + + F E A + ++YLH + I +
Sbjct: 83 YAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 139
Query: 432 RDLKPENILL---QKDGHVVLTDFDL--------SFMTSCKPQVFYHAHVNG-------- 472
RD+KPEN+L + + + LTDF S T C + V G
Sbjct: 140 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 199
Query: 473 ----FYFIMYKWLTGY 484
IMY L GY
Sbjct: 200 DMWSLGVIMYILLCGY 215
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 11/176 (6%)
Query: 284 KRDNSSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
KRDN+ + +++ G L ++ +KP+G G G V A+K + +
Sbjct: 5 KRDNNFY-SVE--IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMK 403
N+ RA E +M ++H + L F + +F + L+D +
Sbjct: 62 Q-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL---EEFQDVYIVMELMDANLCQ 117
Query: 404 IFR----EDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ + + + +++ G+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-KVH-RACIEREIMSLLDHPFLPTL 371
LG G G V + + E +A+K ++ R ++H RA I+ ++D L
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 83
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
YA + + ++ + GGELF+ + + + F E A + ++YLH + I +
Sbjct: 84 YAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 432 RDLKPENILL---QKDGHVVLTDFDL--------SFMTSCKPQVFYHAHVNG-------- 472
RD+KPEN+L + + + LTDF S T C + V G
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 473 ----FYFIMYKWLTGY 484
IMY L GY
Sbjct: 201 DMWSLGVIMYILLCGY 216
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 103
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 104 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 156
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-KVH-RACIEREIMSLLDHPFLPTL 371
LG G G V + + E +A+K ++ R ++H RA I+ ++D L
Sbjct: 40 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 97
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
YA + + ++ + GGELF+ + + + F E A + ++YLH + I +
Sbjct: 98 YAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 154
Query: 432 RDLKPENILL---QKDGHVVLTDFDL--------SFMTSCKPQVFYHAHVNG-------- 472
RD+KPEN+L + + + LTDF S T C + V G
Sbjct: 155 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 214
Query: 473 ----FYFIMYKWLTGY 484
IMY L GY
Sbjct: 215 DMWSLGVIMYILLCGY 230
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 92
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 93 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 145
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 92
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 93 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 145
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 78
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 79 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 131
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 170
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 284 KRDNSSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
KRDN+ + +++ G L ++ +KP+G G G V A+K + +
Sbjct: 5 KRDNNFY-SVE--IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMK 403
N+ RA E +M ++H + L F + D EL Q ++
Sbjct: 62 Q-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 120
Query: 404 I-FREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ + + +++ G+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 85
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 86 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 138
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 79
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 80 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 132
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 171
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 11/176 (6%)
Query: 284 KRDNSSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
KRDN+ + +++ G L ++ +KP+G G G V A+K + +
Sbjct: 10 KRDNNFY-SVE--IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 66
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMK 403
N+ RA E +M ++H + L F + +F + L+D +
Sbjct: 67 Q-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL---EEFQDVYIVMELMDANLCQ 122
Query: 404 IFR----EDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ + + + +++ G+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 123 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 178
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE----REIMSLL 363
K +K LG G G+V+ GE + K +LN +A +E IM+ +
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIK--ILNETTGPKANVEFMDEALIMASM 74
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
DHP L L + T I L+T P G L + + I + + ++ G+ Y
Sbjct: 75 DHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN-WCVQIAKGMMY 132
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L +++RDL N+L++ HV +TDF L+
Sbjct: 133 LEERRLVHRDLAARNVLVKSPNHVKITDFGLA 164
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 11/176 (6%)
Query: 284 KRDNSSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
KRDN+ + +++ G L ++ +KP+G G G V A+K + +
Sbjct: 5 KRDNNFY-SVE--IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMK 403
N+ RA E +M ++H + L F + +F + L+D +
Sbjct: 62 Q-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL---EEFQDVYIVMELMDANLCQ 117
Query: 404 IFR----EDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ + + + +++ G+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 82
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 83 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 135
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 91
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 92 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 144
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 183
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVH--RACIEREIMSLLDHPFLPTL 371
LG G G V + G+ A+K + S + H +A I+ +LD +
Sbjct: 37 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILD------V 90
Query: 372 YASFQTSTHICLITDFC-PGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
Y + LI C GGELF+ + ++ + F E A ++ +++LH I
Sbjct: 91 YENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIA 150
Query: 431 YRDLKPENILL---QKDGHVVLTDFDLSFMTS 459
+RD+KPEN+L +KD + LTDF + T+
Sbjct: 151 HRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 16/181 (8%)
Query: 294 QKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRA 353
Q + ++I K K +G G+ G V L+ G+ A++ +K R
Sbjct: 17 QAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD 76
Query: 354 CI-EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF 412
+ E IM DHP + L + +IT++ G L A L R++ RF
Sbjct: 77 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL--------RKNDGRF 128
Query: 413 YAAEVV-------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVF 465
++V G++YL + ++RDL NIL+ + ++DF +S + P+
Sbjct: 129 TVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA 188
Query: 466 Y 466
Y
Sbjct: 189 Y 189
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 77
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 78 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 130
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 100
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 101 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 153
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 21/162 (12%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 86
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 87 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 139
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
++ GL+Y+H II+RDLKP N+ + +D + + DF L+ T
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 181
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-KVH-RACIEREIMSLLDHPFLPTL 371
LG G G V + + E +A+K ++ R ++H RA I+ ++D L
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 81
Query: 372 YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIY 431
YA + + ++ + GGELF+ + + + F E A + ++YLH + I +
Sbjct: 82 YAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 432 RDLKPENILL---QKDGHVVLTDFDLSFMTS 459
RD+KPEN+L + + + LTDF + T+
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAKETT 169
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 86
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 87 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 139
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 85
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 86 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 138
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 99
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 100 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 152
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 284 KRDNSSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
KRDN+ + +++ G L ++ +KP+G G G V A+K + +
Sbjct: 7 KRDNNFY-SVE--IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 63
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMK 403
N+ RA E +M ++H + L F + D EL Q ++
Sbjct: 64 Q-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 122
Query: 404 I-FREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ + + +++ G+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 123 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 175
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 82
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 83 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 135
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 76
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 77 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 129
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 87
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 88 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 140
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 11/176 (6%)
Query: 284 KRDNSSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV 343
KRDN+ + +++ G L ++ +KP+G G G V A+K + +
Sbjct: 6 KRDNNFY-SVE--IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 62
Query: 344 MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMK 403
N+ RA E +M ++H + L F + +F + L+D +
Sbjct: 63 Q-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL---EEFQDVYIVMELMDANLCQ 118
Query: 404 IFR----EDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ + + + +++ G+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 119 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 77
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 78 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 130
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ ++ ++ +G G G V+ + G + A+K + + A E ++ L
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAE-DEGIPSTAIREISLLKELH 77
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + +L + + L+ +F +L +LD+ + ++ + Y +++ G+ +
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGL-QDSQIKIYLYQLLRGVAHC 135
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H I++RDLKP+N+L+ DG + L DF L+ + + H V +Y
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWY 185
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 16/181 (8%)
Query: 294 QKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRA 353
Q + ++I K K +G G+ G V L+ G+ A++ +K R
Sbjct: 2 QAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD 61
Query: 354 CI-EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF 412
+ E IM DHP + L + +IT++ G L A L R++ RF
Sbjct: 62 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL--------RKNDGRF 113
Query: 413 YAAEVV-------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVF 465
++V G++YL + ++RDL NIL+ + ++DF +S + P+
Sbjct: 114 TVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA 173
Query: 466 Y 466
Y
Sbjct: 174 Y 174
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 82
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 83 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 135
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 103
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 104 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 156
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 8/184 (4%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL--LDH 365
++ I +G G G V + G++ A+K +S + V + REI L L H
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLES---EDDPVIKKIALREIRMLKQLKH 61
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH 425
P L L F+ + L+ ++C L L Q + E + + + + + H
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCH 119
Query: 426 CLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKWLTGYF 485
I+RD+KPENIL+ K + L DF + + + P +Y V ++ + L G
Sbjct: 120 KHNCIHRDVKPENILITKHSVIKLCDFGFARLLT-GPSDYYDDEVATRWYRSPELLVGDT 178
Query: 486 TYVP 489
Y P
Sbjct: 179 QYGP 182
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E IM DHP + L S + ++T++ G L + L R+ A+F
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--------RKHDAQFTVI 147
Query: 416 EVV-------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFY 466
++V G++YL +G ++RDL NIL+ + ++DF L+ + P+ Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAY 205
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 8/153 (5%)
Query: 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNR-----NKVHRACIEREIM 360
+ + PLG G G V + + +K ++K +L K+ + +E I+
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 361 SLLDHPFLPTLYASFQTSTHICLITD-FCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
S ++H + + F+ L+ + G +LFA +D+ P E A + ++V
Sbjct: 84 SRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR--LDEPLASYIFRQLVS 141
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDF 452
+ YL II+RD+K ENI++ +D + L DF
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDF 174
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 23/173 (13%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQGAGE----LYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
+ +K LG G G+V+ GE A+K + ++ NK E +M+
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANK--EILDEAYVMAG 75
Query: 363 LDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF-------YAA 415
+ P++ L TST + L+T P G LLD RE+ R +
Sbjct: 76 VGSPYVSRLLGICLTST-VQLVTQLMPYG---CLLDH-----VRENRGRLGSQDLLNWCM 126
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
++ G+ YL + +++RDL N+L++ HV +TDF L+ + + YHA
Sbjct: 127 QIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID-ETEYHA 178
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
+ ++ ++ +G G G V+ + G + A+K + + A E ++ L
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAE-DEGIPSTAIREISLLKELH 77
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP + +L + + L+ +F +L +LD+ + ++ + Y +++ G+ +
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGL-QDSQIKIYLYQLLRGVAHC 135
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFY 474
H I++RDLKP+N+L+ DG + L DF L+ + + H V +Y
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWY 185
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 12/163 (7%)
Query: 298 GSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIER 357
G ++ L ++ +K LG G G V + GE+ A+K + + N R R
Sbjct: 1 GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ-NSTDAQRTF--R 57
Query: 358 EIMSLLD---HPFLPTLYASFQTSTH--ICLITDFCPGGELFALLDKQPMKIFREDSARF 412
EIM L + H + L + + L+ D+ +L A++ I ++
Sbjct: 58 EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRAN---ILEPVHKQY 113
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++ ++YLH G+++RD+KP NILL + HV + DF LS
Sbjct: 114 VVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS 156
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 16/163 (9%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACI-EREIMSLLDHPFLPT 370
K +G G+ G V L+ G+ A++ +K R + E IM DHP +
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVV-------IGLEY 423
L + +IT++ G L A L R++ RF ++V G++Y
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFL--------RKNDGRFTVIQLVGMLRGIGSGMKY 125
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFY 466
L + ++RDL NIL+ + ++DF +S + P+ Y
Sbjct: 126 LSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY 168
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E IM DHP + L S + ++T+ G L + L R+ A+F
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--------RKHDAQFTVI 118
Query: 416 EVV-------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFY 466
++V G++YL +G ++RDL NIL+ + ++DF LS + P+ Y
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 33/191 (17%)
Query: 284 KRDNSSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGEL-YAMKAMEKS 342
K +S I I+++ G+GE G+ S L +L G EL A+K ++
Sbjct: 17 KEIEASCITIERVIGAGE--------------FGEVCSGRL-KLPGKRELPVAIKTLK-- 59
Query: 343 VMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPM 402
V + E IM DHP + L S + ++T++ G L L K
Sbjct: 60 VGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKK--- 116
Query: 403 KIFREDSARFYAAEVV-------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ +F ++V G++YL +G ++RDL NIL+ + ++DF LS
Sbjct: 117 -----NDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 171
Query: 456 FMTSCKPQVFY 466
+ P+ Y
Sbjct: 172 RVLEDDPEAAY 182
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E IM DHP + L S + ++T+ G L + L R+ A+F
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--------RKHDAQFTVI 147
Query: 416 EVV-------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFY 466
++V G++YL +G ++RDL NIL+ + ++DF LS + P+ Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 74
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LI P G L + + I + + ++ G+ Y
Sbjct: 75 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 132
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 176
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E IM DHP + L S + ++T++ G L + L R+ A+F
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--------RKHDAQFTVI 147
Query: 416 EVV-------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFY 466
++V G++YL +G ++RDL NIL+ + ++DF L + P+ Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAY 205
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 75
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LI P G L + + I + + ++ G+ Y
Sbjct: 76 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 133
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 177
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 76
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LI P G L + + I + + ++ G+ Y
Sbjct: 77 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 134
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 178
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 78
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LI P G L + + I + + ++ G+ Y
Sbjct: 79 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 136
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 180
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 5/154 (3%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
+I K +K LG G G V + + ++ A+K ++ M V E +M
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKV-AVKTLKPGTM----SVQAFLEEANLMK 62
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
L H L LYA I +IT+F G L L ++A++ G+
Sbjct: 63 TLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM 122
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+ I+RDL+ N+L+ + + DF L+
Sbjct: 123 AYIERKNYIHRDLRAANVLVSESLMCKIADFGLA 156
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 77
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LI P G L + + I + + ++ G+ Y
Sbjct: 78 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 135
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 179
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 24/153 (15%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTL 371
K +G G G V +L + E+ K ++ NR E +IM ++ HP + L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR--------ELQIMRIVKHPNVVDL 97
Query: 372 YASFQTS------THICLITDFCP-----GGELFALLDKQPMKIFREDSARFYAAEVVIG 420
A F ++ + L+ ++ P +A L KQ M + + Y +++
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKL-KQTMPMLL---IKLYMYQLLRS 153
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVV-LTDF 452
L Y+H +GI +RD+KP+N+LL V+ L DF
Sbjct: 154 LAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDF 186
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 81
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 82 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 139
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF + + + + YHA
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE-YHA 183
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E IM DHP + L S + ++T+ G L + L R+ A+F
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--------RKHDAQFTVI 147
Query: 416 EVV-------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFY 466
++V G++YL +G ++RDL NIL+ + ++DF LS + P+ Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 8/155 (5%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD 364
L ++ +KP+G G G V A+K + + N+ RA E +M ++
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVN 75
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFR----EDSARFYAAEVVIG 420
H + L F + +F + L+D ++ + + + +++ G
Sbjct: 76 HKNIIGLLNVFTPQKSL---EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 132
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++LH GII+RDLKP NI+++ D + + DF L+
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 76
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 77 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 134
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF + + + + YHA
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE-YHA 178
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Query: 308 FKPIKPLGCGDTGSVH--LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDH 365
FK IK LG G G+V+ L +G + ME + E +M+ +D+
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH 425
P + L TST + LIT P G L + + I + + ++ G+ YL
Sbjct: 111 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLE 168
Query: 426 CLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
+++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 169 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 210
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 26/155 (16%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
+G G GSV + +GE A+K + + ++++ RE++ LL H
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPF---QSEIFAKRAYRELL-LLKH-------- 79
Query: 374 SFQTSTHICLITDFCPGGEL-----------FALLDKQPMK--IFREDSARFYAAEVVIG 420
Q I L+ F P L F D Q + F E+ ++ +++ G
Sbjct: 80 -MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKG 138
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L+Y+H G+++RDLKP N+ + +D + + DF L+
Sbjct: 139 LKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 173
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 74
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 75 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 132
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF + + + + YHA
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE-YHA 176
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK L G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 74
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 75 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 132
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 176
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 26/155 (16%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
+G G GSV + +GE A+K + + ++++ RE++ LL H
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPF---QSEIFAKRAYRELL-LLKH-------- 97
Query: 374 SFQTSTHICLITDFCPGGEL-----------FALLDKQPMK--IFREDSARFYAAEVVIG 420
Q I L+ F P L F D Q + F E+ ++ +++ G
Sbjct: 98 -MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKG 156
Query: 421 LEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L+Y+H G+++RDLKP N+ + +D + + DF L+
Sbjct: 157 LKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 191
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK L G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 81
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LIT P G L + + I + + ++ G+ Y
Sbjct: 82 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 139
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 183
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + D+ L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLA 172
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 30/183 (16%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSL 362
+ + ++ +G G G V+ + GE +A+K +EK + E I+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQ-NNYGETFALKKIRLEKE---DEGIPSTTIREISILKE 56
Query: 363 LDHPFLPTLYASFQTSTHICLI-----------TDFCPGGELFALLDKQPMKIFREDSAR 411
L H + LY T + L+ D C GG +A+
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-------------LESVTAK 103
Query: 412 FYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVN 471
+ +++ G+ Y H +++RDLKP+N+L+ ++G + + DF L+ + + H V
Sbjct: 104 SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVT 163
Query: 472 GFY 474
+Y
Sbjct: 164 LWY 166
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 30/183 (16%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSL 362
+ + ++ +G G G V+ + GE +A+K +EK + E I+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQ-NNYGETFALKKIRLEKE---DEGIPSTTIREISILKE 56
Query: 363 LDHPFLPTLYASFQTSTHICLI-----------TDFCPGGELFALLDKQPMKIFREDSAR 411
L H + LY T + L+ D C GG +A+
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-------------LESVTAK 103
Query: 412 FYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVN 471
+ +++ G+ Y H +++RDLKP+N+L+ ++G + + DF L+ + + H V
Sbjct: 104 SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVT 163
Query: 472 GFY 474
+Y
Sbjct: 164 LWY 166
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 30/183 (16%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKA--MEKSVMLNRNKVHRACIEREIMSL 362
+ + ++ +G G G V+ + GE +A+K +EK + E I+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQ-NNYGETFALKKIRLEKE---DEGIPSTTIREISILKE 56
Query: 363 LDHPFLPTLYASFQTSTHICLI-----------TDFCPGGELFALLDKQPMKIFREDSAR 411
L H + LY T + L+ D C GG +A+
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-------------LESVTAK 103
Query: 412 FYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVN 471
+ +++ G+ Y H +++RDLKP+N+L+ ++G + + DF L+ + + H V
Sbjct: 104 SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVT 163
Query: 472 GFY 474
+Y
Sbjct: 164 LWY 166
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 26 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+RD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 183
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M L H L LYA
Sbjct: 192 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKLRHEKLVQLYA 246
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++T++ G L L + K R AA++ G+ Y+ + ++RD
Sbjct: 247 VV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L+ NIL+ ++ + DF L+
Sbjct: 306 LRAANILVGENLVCKVADFGLA 327
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L LDK P ++ + +++ GL++LH +++RDLKP+NIL+ G + L D
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 452 FDLSFMTS 459
F L+ + S
Sbjct: 164 FGLARIYS 171
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 34 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 89
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+RD
Sbjct: 90 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 149
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 191
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 76
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ + +D +F +
Sbjct: 77 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCAKLT---DDHVQFLIYQ 129
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + DF L+
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M L H L LYA
Sbjct: 192 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKLRHEKLVQLYA 246
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++T++ G L L + K R AA++ G+ Y+ + ++RD
Sbjct: 247 VV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L+ NIL+ ++ + DF L+
Sbjct: 306 LRAANILVGENLVCKVADFGLA 327
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 8/158 (5%)
Query: 299 SGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE 358
SG + + K ++ +G G+ G V L + +G A+K ++ N E
Sbjct: 186 SGWALNMKELKLLQTIGKGEFGDVMLGDYRG--NKVAVKCIK-----NDATAQAFLAEAS 238
Query: 359 IMSLLDHPFLPTLYASF-QTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEV 417
+M+ L H L L + + ++T++ G L L + + D ++ +V
Sbjct: 239 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 298
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+EYL ++RDL N+L+ +D ++DF L+
Sbjct: 299 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 21 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+RD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 178
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 31/174 (17%)
Query: 289 SWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN 348
S + I+++ G+GE G+ S HL +L G E++ KS +
Sbjct: 7 SCVKIEQVIGAGE--------------FGEVCSGHL-KLPGKREIFVAIKTLKSGYTEKQ 51
Query: 349 KVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFRED 408
+ E IM DHP + L ST + +IT+F G L + L R++
Sbjct: 52 R-RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL--------RQN 102
Query: 409 SARFYAAEVV-------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+F ++V G++YL + ++R L NIL+ + ++DF LS
Sbjct: 103 DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLS 156
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 8/158 (5%)
Query: 299 SGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE 358
SG + + K ++ +G G+ G V L + +G A+K ++ N E
Sbjct: 14 SGWALNMKELKLLQTIGKGEFGDVMLGDYRG--NKVAVKCIK-----NDATAQAFLAEAS 66
Query: 359 IMSLLDHPFLPTLYASF-QTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEV 417
+M+ L H L L + + ++T++ G L L + + D ++ +V
Sbjct: 67 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 126
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+EYL ++RDL N+L+ +D ++DF L+
Sbjct: 127 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 23 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+RD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 180
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 26 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+RD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 183
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 21 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+RD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 178
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 23 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+RD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 180
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 26 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+RD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 183
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 21 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+RD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 178
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L LDK P ++ + +++ GL++LH +++RDLKP+NIL+ G + L D
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 452 FDLSFMTS 459
F L+ + S
Sbjct: 164 FGLARIYS 171
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M L H L LYA
Sbjct: 275 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKLRHEKLVQLYA 329
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++T++ G L L + K R AA++ G+ Y+ + ++RD
Sbjct: 330 VV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 388
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L+ NIL+ ++ + DF L+
Sbjct: 389 LRAANILVGENLVCKVADFGLA 410
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V++ G + Y++ K++ + +V E +M + HP L L
Sbjct: 40 LGGGQYGEVYV----GVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 95
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
++T++ P G L L + + + A ++ +EYL I+RD
Sbjct: 96 VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRD 155
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 197
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 16/161 (9%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACI-EREIMSLLDHPFLPTLY 372
+G G+ G V L+ G+ A++ + K R + E IM DHP + L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 373 ASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVV-------IGLEYLH 425
+ ++ +F G L A L R+ +F ++V G+ YL
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFL--------RKHDGQFTVIQLVGMLRGIAAGMRYLA 162
Query: 426 CLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFY 466
+G ++RDL NIL+ + ++DF LS + P+ Y
Sbjct: 163 DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVY 203
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 25 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 80
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+RD
Sbjct: 81 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 140
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 182
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 21 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+RD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 178
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L LDK P ++ + +++ GL++LH +++RDLKP+NIL+ G + L D
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 452 FDLSFMTS 459
F L+ + S
Sbjct: 164 FGLARIYS 171
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN-------RNKVHRACIEREIMSLLDHP 366
LGCG+ GSV QG +Y M+ + V + + E +IM LD+P
Sbjct: 344 LGCGNFGSVR----QG---VYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 396
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
++ L Q + L+ + GG L L + +I + A +V +G++YL
Sbjct: 397 YIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH-QVSMGMKYLEE 454
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++R+L N+LL + ++DF LS
Sbjct: 455 KNFVHRNLAARNVLLVNRHYAKISDFGLS 483
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M L H L LYA
Sbjct: 16 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKLRHEKLVQLYA 70
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++T++ G L L + K R AA++ G+ Y+ + ++RD
Sbjct: 71 VV-SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 129
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L+ NIL+ ++ + DF L+
Sbjct: 130 LRAANILVGENLVCKVADFGLA 151
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 20/165 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGEL---YAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
K +G GD+G V L+ G+ A+KA++ + + + E IM DHP +
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS--EASIMGQFDHPNI 112
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVV-------IGL 421
L ++T++ G L L R +F ++V G+
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFL--------RTHDGQFTIMQLVGMLRGVGAGM 164
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFY 466
YL LG ++RDL N+L+ + ++DF LS + P Y
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 303 IGLHHFKPIKPLGCGDTGSVHLVEL---QGAGELYAMKAMEKSVMLNRNKVHRACIEREI 359
IG + ++ LG G G V E G A+K ++ V+ + E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
M LDH L LY T + ++T+ P G L L K +R YA +V
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 126
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
G+ YL I+RDL N+LL V + DF L
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 22 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+RD
Sbjct: 78 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 137
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L N L+ ++ V + DF LS
Sbjct: 138 LAARNCLVGENHLVKVADFGLS 159
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M L H L LYA
Sbjct: 19 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKLRHEKLVQLYA 73
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++T++ G L L + K R AA++ G+ Y+ + ++RD
Sbjct: 74 VV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 132
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L+ NIL+ ++ + DF L+
Sbjct: 133 LRAANILVGENLVCKVADFGLA 154
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
++ + +G G G + + G++ K ++ M K E ++ L HP
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEK-QMLVSEVNLLRELKHPN 66
Query: 368 LPTLYASF--QTSTHICLITDFCPGGELFALLDK--QPMKIFREDSARFYAAEVVIGLEY 423
+ Y +T+T + ++ ++C GG+L +++ K + + E+ ++ + L+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 424 LHCLG-----IIYRDLKPENILLQKDGHVVLTDFDLS 455
H +++RDLKP N+ L +V L DF L+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
++ + +G G G + + G++ K ++ M K E ++ L HP
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEK-QMLVSEVNLLRELKHPN 66
Query: 368 LPTLYASF--QTSTHICLITDFCPGGELFALLDK--QPMKIFREDSARFYAAEVVIGLEY 423
+ Y +T+T + ++ ++C GG+L +++ K + + E+ ++ + L+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 424 LHCLG-----IIYRDLKPENILLQKDGHVVLTDFDLS 455
H +++RDLKP N+ L +V L DF L+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 23 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+RD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L N L+ ++ V + DF LS
Sbjct: 139 LAARNCLVGENHLVKVADFGLS 160
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
++ + +G G G + + G++ K ++ M K E ++ L HP
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEK-QMLVSEVNLLRELKHPN 66
Query: 368 LPTLYASF--QTSTHICLITDFCPGGELFALLDK--QPMKIFREDSARFYAAEVVIGLEY 423
+ Y +T+T + ++ ++C GG+L +++ K + + E+ ++ + L+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 424 LHCLG-----IIYRDLKPENILLQKDGHVVLTDFDLS 455
H +++RDLKP N+ L +V L DF L+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 26 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+RD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L N L+ ++ V + DF LS
Sbjct: 142 LAARNCLVGENHLVKVADFGLS 163
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 5/154 (3%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
+I K +K LG G G V + + ++ A+K ++ M V E +M
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKV-AVKTLKPGTM----SVQAFLEEANLMK 63
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
L H L LYA I +IT++ G L L ++A++ G+
Sbjct: 64 TLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM 123
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+ I+RDL+ N+L+ + + DF L+
Sbjct: 124 AYIERKNYIHRDLRAANVLVSESLMCKIADFGLA 157
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTL 371
K LG G G V + ++ A+K M+ M V E +M L H L L
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKV-AVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKL 242
Query: 372 YASFQTSTHICLITDFCPGGELFALL-----DKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+A T I +IT+F G L L KQP+ + ++A++ G+ ++
Sbjct: 243 HAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID-----FSAQIAEGMAFIEQ 296
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+RDL+ NIL+ + DF L+
Sbjct: 297 RNYIHRDLRAANILVSASLVCKIADFGLA 325
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 19 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+RD
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L N L+ ++ V + DF LS
Sbjct: 135 LAARNCLVGENHLVKVADFGLS 156
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 399 KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
KQ + + RFY E++ L+Y H +GI++RD+KP N+L+ + H L D
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHE-HRKLRLIDWGLAE 180
Query: 459 SCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
P Y+ V YF + L Y Y
Sbjct: 181 FYHPGQEYNVRVASRYFKGPELLVDYQMY 209
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTL 371
K LG G G V + ++ A+K M+ M V E +M L H L L
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKV-AVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKL 248
Query: 372 YASFQTSTHICLITDFCPGGELFALL-----DKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+A T I +IT+F G L L KQP+ + ++A++ G+ ++
Sbjct: 249 HAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID-----FSAQIAEGMAFIEQ 302
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+RDL+ NIL+ + DF L+
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIADFGLA 331
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
+K LG G G V + +G ++ A+K +++ M + A ++M L H L
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEA----KVMMNLSHEKLVQ 68
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
LY I +IT++ G L L + + F+ +V +EYL +
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDL N L+ G V ++DF LS
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTL 371
K LG G G V + ++ A+K M+ M V E +M L H L L
Sbjct: 21 KKLGAGQFGEVWMATYNKHTKV-AVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKL 75
Query: 372 YASFQTSTHICLITDFCPGGELFALL-----DKQPMKIFREDSARFYAAEVVIGLEYLHC 426
+A T I +IT+F G L L KQP+ + ++A++ G+ ++
Sbjct: 76 HAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID-----FSAQIAEGMAFIEQ 129
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+RDL+ NIL+ + DF L+
Sbjct: 130 RNYIHRDLRAANILVSASLVCKIADFGLA 158
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
+ K I+ LG G G V L G GE+ A+KA++ HR+ ++EI
Sbjct: 15 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADC----GPQHRSGWKQEI--- 67
Query: 363 LDHPFLPTLYASF----------QTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF 412
L TLY Q + L+ ++ P G L L + + + +
Sbjct: 68 ---DILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQ---LLL 121
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+A ++ G+ YLH I+R+L N+LL D V + DF L+
Sbjct: 122 FAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLA 164
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 19 LGGGQFGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+RD
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L N L+ ++ V + DF LS
Sbjct: 135 LAARNCLVGENHLVKVADFGLS 156
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 303 IGLHHFKPIKPLGCGDTGSVHLVEL---QGAGELYAMKAMEKSVMLNRNKVHRACIEREI 359
IG + ++ LG G G V E G A+K ++ V+ + E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
M LDH L LY T + ++T+ P G L L K +R YA +V
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 126
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
G+ YL I+RDL N+LL V + DF L
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 303 IGLHHFKPIKPLGCGDTGSVHLVEL---QGAGELYAMKAMEKSVMLNRNKVHRACIEREI 359
IG + ++ LG G G V E G A+K ++ V+ + E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
M LDH L LY T + ++T+ P G L L K +R YA +V
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 132
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
G+ YL I+RDL N+LL V + DF L
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 303 IGLHHFKPIKPLGCGDTGSVHLVEL---QGAGELYAMKAMEKSVMLNRNKVHRACIEREI 359
IG + ++ LG G G V E G A+K ++ V+ + E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
M LDH L LY T + ++T+ P G L L K +R YA +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 122
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
G+ YL I+RDL N+LL V + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 19/181 (10%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI--MSLLDH 365
++ + +G G G V + G+ A+K K +M N + REI + LL H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITALREIKILQLLKH 76
Query: 366 PFLPTLYASFQTSTH--------ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEV 417
+ L +T I L+ DFC +L LL +K + R +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQM-L 134
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL----SFMTSCKPQVFYHAHVNGF 473
+ GL Y+H I++RD+K N+L+ +DG + L DF L S + +P + + V +
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 474 Y 474
Y
Sbjct: 195 Y 195
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 303 IGLHHFKPIKPLGCGDTGSVHLVEL---QGAGELYAMKAMEKSVMLNRNKVHRACIEREI 359
IG + ++ LG G G V E G A+K ++ V+ + E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
M LDH L LY T + ++T+ P G L L K +R YA +V
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 132
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
G+ YL I+RDL N+LL V + DF L
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M L H L LYA
Sbjct: 17 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKLRHEKLVQLYA 71
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++T++ G L L + K R AA++ G+ Y+ + ++RD
Sbjct: 72 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 130
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L+ NIL+ ++ + DF L+
Sbjct: 131 LRAANILVGENLVCKVADFGLA 152
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M L H L LYA
Sbjct: 15 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKLRHEKLVQLYA 69
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++T++ G L L + K R AA++ G+ Y+ + ++RD
Sbjct: 70 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 128
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L+ NIL+ ++ + DF L+
Sbjct: 129 LRAANILVGENLVCKVADFGLA 150
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 303 IGLHHFKPIKPLGCGDTGSVHLVEL---QGAGELYAMKAMEKSVMLNRNKVHRACIEREI 359
IG + ++ LG G G V E G A+K ++ V+ + E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
M LDH L LY T + ++T+ P G L L K +R YA +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 122
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
G+ YL I+RDL N+LL V + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
+K LG G G V + +G ++ A+K +++ M + A ++M L H L
Sbjct: 13 LKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEA----KVMMNLSHEKLVQ 67
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
LY I +IT++ G L L + + F+ +V +EYL +
Sbjct: 68 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 126
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDL N L+ G V ++DF LS
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLS 151
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 3/155 (1%)
Query: 315 GCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYAS 374
G D +V+L + GE ++ + N V E + L +HP + A+
Sbjct: 36 GFEDLMTVNLARYKPTGEYVTVRRINLEACSNE-MVTFLQGELHVSKLFNHPNIVPYRAT 94
Query: 375 FQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDL 434
F + ++T F G L+ M E + + V+ L+Y+H +G ++R +
Sbjct: 95 FIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSV 154
Query: 435 KPENILLQKDGHVVLTDF--DLSFMTSCKPQVFYH 467
K +IL+ DG V L+ +LS ++ + Q H
Sbjct: 155 KASHILISVDGKVYLSGLRSNLSMISHGQRQRVVH 189
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 225 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 280
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+R+
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRN 340
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 382
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
+K LG G G V + +G ++ A+K +++ M + A ++M L H L
Sbjct: 9 LKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEA----KVMMNLSHEKLVQ 63
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
LY I +IT++ G L L + + F+ +V +EYL +
Sbjct: 64 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 122
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDL N L+ G V ++DF LS
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLS 147
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 303 IGLHHFKPIKPLGCGDTGSVHLVEL---QGAGELYAMKAMEKSVMLNRNKVHRACIEREI 359
IG + ++ LG G G V E G A+K ++ V+ + E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
M LDH L LY T + ++T+ P G L L K +R YA +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 122
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
G+ YL I+RDL N+LL V + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
+K LG G G V + +G ++ A+K +++ M + A ++M L H L
Sbjct: 20 LKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEA----KVMMNLSHEKLVQ 74
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
LY I +IT++ G L L + + F+ +V +EYL +
Sbjct: 75 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 133
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDL N L+ G V ++DF LS
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLS 158
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 14/111 (12%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E ++ ++L HP + L ++CL+ +F GG L +L K D +A
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAV 112
Query: 416 EVVIGLEYLH---CLGIIYRDLKPENIL-LQK-------DGHVVLTDFDLS 455
++ G+ YLH + II+RDLK NIL LQK + + +TDF L+
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
+K LG G G V + +G ++ A+K +++ M + A ++M L H L
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEA----KVMMNLSHEKLVQ 68
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
LY I +IT++ G L L + + F+ +V +EYL +
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDL N L+ G V ++DF LS
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLN-RNKVHRACIEREIMS 361
+ K I+ LG G G V L G GE+ A+KA+++ R+ R E EI+
Sbjct: 9 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQR---EIEILR 65
Query: 362 LLDHPFLPTLYASF--QTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
L H + Q + L+ ++ P G +L D P +A ++
Sbjct: 66 TLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG---SLRDYLPRHCVGLAQLLLFAQQICE 122
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+ YLH I+R L N+LL D V + DF L+
Sbjct: 123 GMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 158
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M L H L LYA
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKLRHEKLVQLYA 80
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++T++ G L L + K R AA++ G+ Y+ + ++RD
Sbjct: 81 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L+ NIL+ ++ + DF L+
Sbjct: 140 LRAANILVGENLVCKVADFGLA 161
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 3/155 (1%)
Query: 315 GCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYAS 374
G D +V+L + GE ++ + N V E + L +HP + A+
Sbjct: 20 GFEDLMTVNLARYKPTGEYVTVRRINLEACSNE-MVTFLQGELHVSKLFNHPNIVPYRAT 78
Query: 375 FQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDL 434
F + ++T F G L+ M E + + V+ L+Y+H +G ++R +
Sbjct: 79 FIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSV 138
Query: 435 KPENILLQKDGHVVLTDF--DLSFMTSCKPQVFYH 467
K +IL+ DG V L+ +LS ++ + Q H
Sbjct: 139 KASHILISVDGKVYLSGLRSNLSMISHGQRQRVVH 173
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 267 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 322
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+R+
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRN 382
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 424
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 399 KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
KQ + + RFY E++ L+Y H +GI++RD+KP N+++ + H L D
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 180
Query: 459 SCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
P Y+ V YF + L Y Y
Sbjct: 181 FYHPGQEYNVRVASRYFKGPELLVDYQMY 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLN-RNKVHRACIEREIMS 361
+ K I+ LG G G V L G GE+ A+KA+++ R+ R E EI+
Sbjct: 10 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQR---EIEILR 66
Query: 362 LLDHPFLPTLYASF--QTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI 419
L H + Q + L+ ++ P G +L D P +A ++
Sbjct: 67 TLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG---SLRDYLPRHCVGLAQLLLFAQQICE 123
Query: 420 GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+ YLH I+R L N+LL D V + DF L+
Sbjct: 124 GMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 159
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
+ K I+ LG G G V L G GE+ A+KA++ HR+ ++EI
Sbjct: 15 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADC----GPQHRSGWKQEI--- 67
Query: 363 LDHPFLPTLYASF----------QTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF 412
L TLY Q + L+ ++ P G L L + + + +
Sbjct: 68 ---DILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQ---LLL 121
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+A ++ G+ YLH I+R+L N+LL D V + DF L+
Sbjct: 122 FAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLA 164
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 76
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LI P G L + + I + + ++ G+ Y
Sbjct: 77 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 134
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF + + + + YHA
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE-YHA 178
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + F L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLA 172
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 228 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 283
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+IT+F G L L + + + A ++ +EYL I+R+
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRN 343
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 385
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAM-----EKSVMLNRNKVHRACIE 356
KI +K + LG G +V+L E A+KA+ EK L R E
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKR-------FE 59
Query: 357 REI--MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQ-PMKIFREDSARFY 413
RE+ S L H + ++ + L+ ++ G L ++ P+ + D+A +
Sbjct: 60 REVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSV---DTAINF 116
Query: 414 AAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++ G+++ H + I++RD+KP+NIL+ + + + DF ++
Sbjct: 117 TNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA 158
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
+K LG G G V + +G ++ A+K +++ M + A ++M L H L
Sbjct: 29 LKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEA----KVMMNLSHEKLVQ 83
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
LY I +IT++ G L L + + F+ +V +EYL +
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDL N L+ G V ++DF LS
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 76
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LI P G L + + I + + ++ G+ Y
Sbjct: 77 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 134
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF + + + + YHA
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE-YHA 178
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 399 KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
KQ + + RFY E++ L+Y H +GI++RD+KP N+++ + H L D
Sbjct: 127 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 185
Query: 459 SCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
P Y+ V YF + L Y Y
Sbjct: 186 FYHPGQEYNVRVASRYFKGPELLVDYQMY 214
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 19/181 (10%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI--MSLLDH 365
++ + +G G G V + G+ A+K K +M N + REI + LL H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITALREIKILQLLKH 76
Query: 366 PFLPTLYASFQTSTH--------ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEV 417
+ L +T I L+ DFC +L LL +K + R +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQM-L 134
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL----SFMTSCKPQVFYHAHVNGF 473
+ GL Y+H I++RD+K N+L+ +DG + L DF L S + +P + + V +
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 474 Y 474
Y
Sbjct: 195 Y 195
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 399 KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
KQ + + RFY E++ L+Y H +GI++RD+KP N+++ + H L D
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 180
Query: 459 SCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
P Y+ V YF + L Y Y
Sbjct: 181 FYHPGQEYNVRVASRYFKGPELLVDYQMY 209
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 19/181 (10%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI--MSLLDH 365
++ + +G G G V + G+ A+K K +M N + REI + LL H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITALREIKILQLLKH 76
Query: 366 PFLPTLYASFQTSTH--------ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEV 417
+ L +T I L+ DFC +L LL +K + R +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQM-L 134
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL----SFMTSCKPQVFYHAHVNGF 473
+ GL Y+H I++RD+K N+L+ +DG + L DF L S + +P + + V +
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 474 Y 474
Y
Sbjct: 195 Y 195
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
+K LG G G V + +G ++ A+K +++ M + A ++M L H L
Sbjct: 29 LKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEA----KVMMNLSHEKLVQ 83
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
LY I +IT++ G L L + + F+ +V +EYL +
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDL N L+ G V ++DF LS
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 399 KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
KQ + + RFY E++ L+Y H +GI++RD+KP N+++ + H L D
Sbjct: 121 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 179
Query: 459 SCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
P Y+ V YF + L Y Y
Sbjct: 180 FYHPGQEYNVRVASRYFKGPELLVDYQMY 208
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 399 KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
KQ + + RFY E++ L+Y H +GI++RD+KP N+++ + H L D
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 180
Query: 459 SCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
P Y+ V YF + L Y Y
Sbjct: 181 FYHPGQEYNVRVASRYFKGPELLVDYQMY 209
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK LG G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 78
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LI P G L + + I + + ++ G+ Y
Sbjct: 79 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 136
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF + + + + YHA
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE-YHA 180
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 399 KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
KQ + + RFY E++ L+Y H +GI++RD+KP N+++ + H L D
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 180
Query: 459 SCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
P Y+ V YF + L Y Y
Sbjct: 181 FYHPGQEYNVRVASRYFKGPELLVDYQMY 209
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 308 FKPIKPLGCGDTGSVH----LVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL 363
FK IK L G G+V+ + E + A+K + ++ NK E +M+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMASV 81
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
D+P + L TST + LI P G L + + I + + ++ G+ Y
Sbjct: 82 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNY 139
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHA 468
L +++RDL N+L++ HV +TDF L+ + + + YHA
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-YHA 183
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 399 KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
KQ + + RFY E++ L+Y H +GI++RD+KP N+++ + H L D
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 180
Query: 459 SCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
P Y+ V YF + L Y Y
Sbjct: 181 FYHPGQEYNVRVASRYFKGPELLVDYQMY 209
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 399 KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
KQ + + RFY E++ L+Y H +GI++RD+KP N+++ + H L D
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 180
Query: 459 SCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
P Y+ V YF + L Y Y
Sbjct: 181 FYHPGQEYNVRVASRYFKGPELLVDYQMY 209
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 399 KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
KQ + + RFY E++ L+Y H +GI++RD+KP N+++ + H L D
Sbjct: 122 KQLRQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 180
Query: 459 SCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
P Y+ V YF + L Y Y
Sbjct: 181 FYHPGQEYNVRVASRYFKGPELLVDYQMY 209
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + D L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLA 172
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 390 GGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVL 449
G +L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + +
Sbjct: 129 GADLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKI 185
Query: 450 TDFDLS 455
DF L+
Sbjct: 186 CDFGLA 191
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 399 KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
KQ + + RFY E++ L+Y H +GI++RD+KP N+++ + H L D
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 180
Query: 459 SCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
P Y+ V YF + L Y Y
Sbjct: 181 FYHPGQEYNVRVASRYFKGPELLVDYQMY 209
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 399 KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
KQ + + RFY E++ L+Y H +GI++RD+KP N+++ + H L D
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 180
Query: 459 SCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
P Y+ V YF + L Y Y
Sbjct: 181 FYHPGQEYNVRVASRYFKGPELLVDYQMY 209
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 399 KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
KQ + + RFY E++ L+Y H +GI++RD+KP N+++ + H L D
Sbjct: 121 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 179
Query: 459 SCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
P Y+ V YF + L Y Y
Sbjct: 180 FYHPGQEYNVRVASRYFKGPELLVDYQMY 208
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 19/181 (10%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI--MSLLDH 365
++ + +G G G V + G+ A+K K +M N + REI + LL H
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITALREIKILQLLKH 75
Query: 366 PFLPTLYASFQTSTH--------ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEV 417
+ L +T I L+ DFC +L LL +K + R +
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQM-L 133
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL----SFMTSCKPQVFYHAHVNGF 473
+ GL Y+H I++RD+K N+L+ +DG + L DF L S + +P + + V +
Sbjct: 134 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 193
Query: 474 Y 474
Y
Sbjct: 194 Y 194
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M L H L LYA
Sbjct: 23 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKLRHEKLVQLYA 77
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++T++ G L L + K R +A++ G+ Y+ + ++RD
Sbjct: 78 VV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L+ NIL+ ++ + DF L+
Sbjct: 137 LRAANILVGENLVCKVADFGLA 158
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 399 KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
KQ + + RFY E++ L+Y H +GI++RD+KP N+++ + H L D
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 180
Query: 459 SCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
P Y+ V YF + L Y Y
Sbjct: 181 FYHPGQEYNVRVASRYFKGPELLVDYQMY 209
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 399 KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458
KQ + + RFY E++ L+Y H +GI++RD+KP N+++ + H L D
Sbjct: 120 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 178
Query: 459 SCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
P Y+ V YF + L Y Y
Sbjct: 179 FYHPGQEYNVRVASRYFKGPELLVDYQMY 207
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M L H L LYA
Sbjct: 23 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKLRHEKLVQLYA 77
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++T++ G L L + K R +A++ G+ Y+ + ++RD
Sbjct: 78 VV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L+ NIL+ ++ + DF L+
Sbjct: 137 LRAANILVGENLVCKVADFGLA 158
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E ++M L H L LYA + I ++T++ G L L + K R AA
Sbjct: 230 EAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 288
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ G+ Y+ + ++RDL+ NIL+ ++ + DF L
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLG 328
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M + H L LYA
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKIRHEKLVQLYA 80
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++T++ G L L + K R AA++ G+ Y+ + ++RD
Sbjct: 81 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L+ NIL+ ++ + DF L+
Sbjct: 140 LRAANILVGENLVCKVADFGLA 161
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
+G G G V+L + A + A+K + + + + + I REI L L +
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNR---MFEDLIDCKRILREIT------ILNRLKS 86
Query: 374 SFQTSTHICLI-TDFCPGGELFALL---DKQPMKIFR------EDSARFYAAEVVIGLEY 423
+ H +I D EL+ +L D K+F+ E + +++G ++
Sbjct: 87 DYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+H GII+RDLKP N LL +D V + DF L+
Sbjct: 147 IHESGIIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + D L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLA 172
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
Query: 334 YAMKAMEKSVMLNRNKVHRACIEREIM-SLLDHPFLPTLYASFQTSTHICLITDFCPGGE 392
YA+K +EK R++V R E E++ H + L F+ L+ + GG
Sbjct: 41 YAVKIIEKQPGHIRSRVFR---EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97
Query: 393 LFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV---L 449
+ + + K+ + F E A +V L++LH GI +RDLKPENIL + V +
Sbjct: 98 ILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKI 155
Query: 450 TDFDLS 455
DFDL
Sbjct: 156 CDFDLG 161
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 21/159 (13%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE--------- 358
++ + P+G G GSV G A+K + + ++ +H RE
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKH 80
Query: 359 --IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416
++ LLD F P S + + L+T G +L ++ Q + +D +F +
Sbjct: 81 ENVIGLLD-VFTPA--RSLEEFNDVYLVTHLM-GADLNNIVKCQKLT---DDHVQFLIYQ 133
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ GL+Y+H II+RDLKP N+ + +D + + D L+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLA 172
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS---LLD 364
F+ + LG G G V V + G LYA+K +S+ R RA E+ S +
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVK---RSMSPFRGPKDRARKLAEVGSHEKVGQ 115
Query: 365 HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL 424
HP L +++ + L T+ C G L + + E Y + ++ L +L
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASL-PEAQVWGYLRDTLLALAHL 173
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
H G+++ D+KP NI L G L DF L
Sbjct: 174 HSQGLVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 21 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+I +F G L L + + + A ++ +EYL I+RD
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 178
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 26 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+I +F G L L + + + A ++ +EYL I+RD
Sbjct: 82 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 183
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 411 RFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHV 470
+++ +++GL LH G+++RDL P NILL + + + DF+L+ + A
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDT--------ADA 188
Query: 471 NGFYFIMYKW 480
N +++ ++W
Sbjct: 189 NKTHYVTHRW 198
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 9/167 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 21 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+I +F G L L + + + A ++ +EYL I+RD
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 434 LKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYFIMYKW 480
L N L+ ++ V + DF LS + + Y AH + I KW
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPI--KW 178
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M L H L LYA
Sbjct: 192 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKLRHEKLVQLYA 246
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++ ++ G L L + K R AA++ G+ Y+ + ++RD
Sbjct: 247 VV-SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L+ NIL+ ++ + DF L+
Sbjct: 306 LRAANILVGENLVCKVADFGLA 327
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 411 RFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHV 470
+++ +++GL LH G+++RDL P NILL + + + DF+L+ + A
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDT--------ADA 188
Query: 471 NGFYFIMYKW 480
N +++ ++W
Sbjct: 189 NKTHYVTHRW 198
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 20/161 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGEL---YAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
K +G GD+G V L+ G+ A+KA++ + + + E IM DHP +
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS--EASIMGQFDHPNI 112
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVV-------IGL 421
L ++T++ G L L R +F ++V G+
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFL--------RTHDGQFTIMQLVGMLRGVGAGM 164
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKP 462
YL LG ++RDL N+L+ + ++DF LS + P
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M L H L LYA
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKLRHEKLVQLYA 80
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++T++ G L L + K R AA++ G+ Y+ + ++RD
Sbjct: 81 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L NIL+ ++ + DF L+
Sbjct: 140 LAAANILVGENLVCKVADFGLA 161
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 353 ACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF 412
A E ++ L H + TL+ T + L+ ++ +L LD I + +
Sbjct: 47 AIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLD-DCGNIINMHNVKL 104
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNG 472
+ +++ GL Y H +++RDLKP+N+L+ + G + L DF L+ S + + + V
Sbjct: 105 FLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTL 164
Query: 473 FY 474
+Y
Sbjct: 165 WY 166
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAM---EKSVMLNRNKVHRACIEREIMS 361
+ ++ ++ +G G G+V + + E+ A+K + + + + + C+ +E
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE--- 57
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFRE-------DSARFYA 414
L H + L+ + + L+ +FC D+ K F + + +
Sbjct: 58 -LKHKNIVRLHDVLHSDKKLTLVFEFC---------DQDLKKYFDSCNGDLDPEIVKSFL 107
Query: 415 AEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++ GL + H +++RDLKP+N+L+ ++G + L DF L+
Sbjct: 108 FQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLA 148
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 306 HHFKPIKPLGCGDTGSVHLVELQ---GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
F + LG G+ GSV +L+ G+ A+K M K+ ++ + + E M
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVK-MLKADIIASSDIEEFLREAACMKE 81
Query: 363 LDHPFLPTLYA-SFQTSTHICL-----ITDFCPGGELFALL-----DKQPMKIFREDSAR 411
DHP + L S ++ L I F G+L A L + P + + R
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 412 FYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
F ++ G+EYL I+RDL N +L +D V + DF LS
Sbjct: 142 FMV-DIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS 184
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 29/39 (74%)
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++G++Y+H GI++RDLKP N L+ +D V + DF L+
Sbjct: 165 LLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA 203
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
+ +F HIC+ + L+ L+ K + F R +A ++ L+ LH II
Sbjct: 164 MLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII 222
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTSC 460
+ DLKPENILL++ G + D F +SC
Sbjct: 223 HCDLKPENILLKQQGRSGIKVID--FGSSC 250
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
+ +F HIC+ + L+ L+ K + F R +A ++ L+ LH II
Sbjct: 164 MLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII 222
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTSC 460
+ DLKPENILL++ G + D F +SC
Sbjct: 223 HCDLKPENILLKQQGRSGIKVID--FGSSC 250
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
++ I+ +G G G V + G+ A+K + + + N R E +I+ H
Sbjct: 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN-AKRTLRELKILKHFKHDN 114
Query: 368 L--------PTL-YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVV 418
+ PT+ Y F++ + ++ D + QP+ + + R++ +++
Sbjct: 115 IIAIKDILRPTVPYGEFKS---VYVVLDLMESDLHQIIHSSQPLTL---EHVRYFLYQLL 168
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
GL+Y+H +I+RDLKP N+L+ ++ + + DF ++
Sbjct: 169 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMA 205
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M L H L LYA
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKLRHEKLVQLYA 80
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++T++ G L L + K R AA++ G+ Y+ + ++RD
Sbjct: 81 VV-SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L+ NIL+ ++ + DF L+
Sbjct: 140 LRAANILVGENLVCKVADFGLA 161
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 4/142 (2%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 22 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+I +F G L L + + + A ++ +EYL I+RD
Sbjct: 78 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 137
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L N L+ ++ V + DF LS
Sbjct: 138 LAARNCLVGENHLVKVADFGLS 159
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL 362
+ + K ++ +G G+ G V L + +G A+K ++ N E +M+
Sbjct: 3 LNMKELKLLQTIGKGEFGDVMLGDYRG--NKVAVKCIK-----NDATAQAFLAEASVMTQ 55
Query: 363 LDHPFLPTLYASF-QTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
L H L L + + ++T++ G L L + + D ++ +V +
Sbjct: 56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 115
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
EYL ++RDL N+L+ +D ++DF L+
Sbjct: 116 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 149
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 15/149 (10%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI-----MSLLDHPFL 368
+G G G VH QG AM ++ +N + E+ + M DHP +
Sbjct: 398 IGEGQFGDVH----QGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVVIGLEYLHC 426
L T + +I + C GEL + L ++ F D A YA ++ L YL
Sbjct: 454 VKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLES 509
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++RD+ N+L+ + V L DF LS
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFGLS 538
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
+ +F HIC+ + L+ L+ K + F R +A ++ L+ LH II
Sbjct: 164 MLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII 222
Query: 431 YRDLKPENILLQKDGHVVLTDFDLSFMTSC 460
+ DLKPENILL++ G + D F +SC
Sbjct: 223 HCDLKPENILLKQQGRSGIKVID--FGSSC 250
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 74/185 (40%), Gaps = 42/185 (22%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL--LDH 365
FK I+ +G G G V + + G+ Y ++ R K + ERE+ +L LDH
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIR---------RVKYNNEKAEREVKALAKLDH 64
Query: 366 ---------------------------PFLPTLYASFQTSTHICLIT--DFCPGGELFAL 396
+ P + S CL +FC G L
Sbjct: 65 VNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQW 124
Query: 397 LDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSF 456
++K+ + + A ++ G++Y+H +I+RDLKP NI L V + DF L
Sbjct: 125 IEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGL-- 182
Query: 457 MTSCK 461
+TS K
Sbjct: 183 VTSLK 187
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 4/142 (2%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V+ +G + Y++ K++ + +V E +M + HP L L
Sbjct: 19 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+I +F G L L + + + A ++ +EYL I+RD
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L N L+ ++ V + DF LS
Sbjct: 135 LAARNCLVGENHLVKVADFGLS 156
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 15/149 (10%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI-----MSLLDHPFL 368
+G G G VH QG AM ++ +N + E+ + M DHP +
Sbjct: 18 IGEGQFGDVH----QGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVVIGLEYLHC 426
L T + +I + C GEL + L ++ F D A YA ++ L YL
Sbjct: 74 VKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLES 129
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++RD+ N+L+ + V L DF LS
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 345 LNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTH----ICLITDFCPGGELFALLDKQ 400
L +++ R E E + L HP + Y S++++ I L+T+ G L L +
Sbjct: 64 LTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKR- 122
Query: 401 PMKIFREDSARFYAAEVVIGLEYLHCLG--IIYRDLKPENILLQK-DGHVVLTDFDLSFM 457
K+ + R + +++ GL++LH II+RDLK +NI + G V + D L+ +
Sbjct: 123 -FKVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFL-- 368
I+ +G G G V + G+ A+K + + + N R E +I+ H +
Sbjct: 60 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN-AKRTLRELKILKHFKHDNIIA 118
Query: 369 ------PTL-YASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
PT+ Y F++ + ++ D + QP+ + + R++ +++ GL
Sbjct: 119 IKDILRPTVPYGEFKS---VYVVLDLMESDLHQIIHSSQPLTL---EHVRYFLYQLLRGL 172
Query: 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+Y+H +I+RDLKP N+L+ ++ + + DF ++
Sbjct: 173 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMA 206
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G+ G VH + + Y M K V + E I+++ H + L+
Sbjct: 13 LGRGEFGIVHRCVETSSKKTY----MAKFVKVKGTDQVLVKKEISILNIARHRNILHLHE 68
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
SF++ + +I +F G ++F ++ ++ E Y +V L++LH I + D
Sbjct: 69 SFESMEELVMIFEFISGLDIFERINTSAFEL-NEREIVSYVHQVCEALQFLHSHNIGHFD 127
Query: 434 LKPENILLQ 442
++PENI+ Q
Sbjct: 128 IRPENIIYQ 136
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M L H L LYA
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKLRHEKLVQLYA 80
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++ ++ G L L + K R AA++ G+ Y+ + ++RD
Sbjct: 81 VV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L+ NIL+ ++ + DF L+
Sbjct: 140 LRAANILVGENLVCKVADFGLA 161
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M L H L LYA
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKLRHEKLVQLYA 80
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++ ++ G L L + K R AA++ G+ Y+ + ++RD
Sbjct: 81 VV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L+ NIL+ ++ + DF L+
Sbjct: 140 LRAANILVGENLVCKVADFGLA 161
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M L H L LYA
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKLRHEKLVQLYA 80
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++ ++ G L L + K R AA++ G+ Y+ + ++RD
Sbjct: 81 VV-SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L+ NIL+ ++ + DF L+
Sbjct: 140 LRAANILVGENLVCKVADFGLA 161
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 331 GELYAMKAMEKSVMLNRNKVHRACIERE--IMSLLDHPFLPTLYASFQTSTHICLITDFC 388
G+ +A+K ++ + + + ++RE I +L HP + L ++ + + ++ +F
Sbjct: 49 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108
Query: 389 PGGEL-FALLDKQPMK-IFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILL 441
G +L F ++ + ++ E A Y +++ L Y H II+RD+KP +LL
Sbjct: 109 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLL 163
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNG 472
Y +++ G+ + H II+RD+KPENIL+ + G V L DF + T P Y V
Sbjct: 129 YLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFA-RTLAAPGEVYDDEVAT 187
Query: 473 FYFIMYKWLTGYFTY 487
++ + L G Y
Sbjct: 188 RWYRAPELLVGDVKY 202
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 331 GELYAMKAMEKSVMLNRNKVHRACIERE--IMSLLDHPFLPTLYASFQTSTHICLITDFC 388
G+ +A+K ++ + + + ++RE I +L HP + L ++ + + ++ +F
Sbjct: 51 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 110
Query: 389 PGGEL-FALLDKQPMK-IFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILL 441
G +L F ++ + ++ E A Y +++ L Y H II+RD+KP +LL
Sbjct: 111 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLL 165
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 15/149 (10%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI-----MSLLDHPFL 368
+G G G VH QG AM ++ +N + E+ + M DHP +
Sbjct: 398 IGEGQFGDVH----QGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVVIGLEYLHC 426
L T + +I + C GEL + L ++ F D A YA ++ L YL
Sbjct: 454 VKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLES 509
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++RD+ N+L+ V L DF LS
Sbjct: 510 KRFVHRDIAARNVLVSATDCVKLGDFGLS 538
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
K ++ LG G G V + G ++ A+K++++ M E +M L H
Sbjct: 15 LKLVERLGAGQAGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQR 69
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEYLHC 426
L LYA T I +IT++ G L L K P I + AA++ G+ ++
Sbjct: 70 LVRLYAVV-TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+RDL+ NIL+ + DF L+
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 17/182 (9%)
Query: 300 GEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACI-ERE 358
++I + + K + +G G+ G V L+ G+ + A++ + R + E
Sbjct: 8 AKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEAS 67
Query: 359 IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVV 418
IM +HP + L S + ++T+F G L + L R + +F ++V
Sbjct: 68 IMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL--------RLNDGQFTVIQLV 119
Query: 419 -------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS-FMTSCKPQVFYHAHV 470
G+ YL + ++RDL NIL+ + ++DF LS F+ Y + +
Sbjct: 120 GMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSL 179
Query: 471 NG 472
G
Sbjct: 180 GG 181
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 113 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICD 169
Query: 452 FDLS 455
F L+
Sbjct: 170 FGLA 173
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKD 444
Y E++ L YLH +G++Y DLKPENI+L ++
Sbjct: 187 YLLEILPALSYLHSIGLVYNDLKPENIMLTEE 218
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 17/151 (11%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
+G G G V+L + + A+K + + + + R E I++ L ++ LY
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNR-MFEDLIDCKRILREITILNRLKSDYIIRLYD 92
Query: 374 SFQTSTHICLITDFCPGGELFALL---DKQPMKIFR------EDSARFYAAEVVIGLEYL 424
+ + D EL+ +L D K+F+ E+ + +++G ++
Sbjct: 93 -------LIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFI 145
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
H GII+RDLKP N LL +D V + DF L+
Sbjct: 146 HESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAM---EKSVMLNRNKVHRACIEREIMS 361
+ ++ ++ +G G G+V + + E+ A+K + + + + + C+ +E
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE--- 57
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFRE-------DSARFYA 414
L H + L+ + + L+ +FC D+ K F + + +
Sbjct: 58 -LKHKNIVRLHDVLHSDKKLTLVFEFC---------DQDLKKYFDSCNGDLDPEIVKSFL 107
Query: 415 AEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+++ GL + H +++RDLKP+N+L+ ++G + L +F L+
Sbjct: 108 FQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLA 148
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 15/149 (10%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI-----MSLLDHPFL 368
+G G G VH QG AM ++ +N + E+ + M DHP +
Sbjct: 18 IGEGQFGDVH----QGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVVIGLEYLHC 426
L T + +I + C GEL + L ++ F D A YA ++ L YL
Sbjct: 74 VKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLES 129
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++RD+ N+L+ V L DF LS
Sbjct: 130 KRFVHRDIAARNVLVSATDCVKLGDFGLS 158
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 19/163 (11%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN--RNKVHRACI-EREIMSLLDHPF- 367
KPLG G G V + G + + + ++ + HRA + E +I+ + H
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 368 -LPTLYASFQTSTHICLITDFCPGGELFALLDKQ-----PMKIFREDSAR---------F 412
+ L A + + +IT+FC G L L + P K+ ED +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+ +V G+E+L I+RDL NILL + V + DF L+
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 186
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL-- 362
L F+PI+ LG G G V + + YA+K + L ++ R + RE+ +L
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIK----RIRLPNRELAREKVMREVKALAK 59
Query: 363 LDHPFLPTLYASFQTSTHICLITDFCPGGELF---ALLDKQPMKIF---------REDSA 410
L+HP + + ++ + P L+ L K+ +K + RE S
Sbjct: 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV 119
Query: 411 RFYA-AEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
+ ++ +E+LH G+++RDLKP NI D V + DF L
Sbjct: 120 CLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 399 KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILL-QKDGHVVLTDFDLSFM 457
KQ +I + RFY E++ L+Y H GI++RD+KP N+++ + + L D+ L+
Sbjct: 123 KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLA-- 180
Query: 458 TSCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
P Y+ V YF + L Y Y
Sbjct: 181 EFYHPAQEYNVRVASRYFKGPELLVDYQMY 210
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 15/149 (10%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI-----MSLLDHPFL 368
+G G G VH QG AM ++ +N + E+ + M DHP +
Sbjct: 18 IGEGQFGDVH----QGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEVVIGLEYLHC 426
L T + +I + C GEL + L ++ + D A YA ++ L YL
Sbjct: 74 VKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLES 129
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++RD+ N+L+ + V L DF LS
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 300 GEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACI-ERE 358
++I + + K + +G G+ G V L+ G+ + A++ + R + E
Sbjct: 10 AKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEAS 69
Query: 359 IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVV 418
IM +HP + L S + ++T+F G L + L R + +F ++V
Sbjct: 70 IMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL--------RLNDGQFTVIQLV 121
Query: 419 -------IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+ YL + ++RDL NIL+ + ++DF LS
Sbjct: 122 GMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 165
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 19/163 (11%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN--RNKVHRACI-EREIMSLLDHPF- 367
KPLG G G V + G + + + ++ + HRA + E +I+ + H
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 368 -LPTLYASFQTSTHICLITDFCPGGELFALLDKQ-----PMKIFREDSAR---------F 412
+ L A + + +IT+FC G L L + P K+ ED +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+ +V G+E+L I+RDL NILL + V + DF L+
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 186
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 19/163 (11%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN--RNKVHRACI-EREIMSLLDHPF- 367
KPLG G G V + G + + + ++ + HRA + E +I+ + H
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 368 -LPTLYASFQTSTHICLITDFCPGGELFALLDKQ-----PMKIFREDSAR---------F 412
+ L A + + +IT+FC G L L + P K+ ED +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+ +V G+E+L I+RDL NILL + V + DF L+
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 186
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 298 GSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE- 356
GSG + +F+ K +GCG+ G EL+ LY + + + +++ + +E
Sbjct: 1 GSGVLMVGPNFRVGKKIGCGNFG-----ELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEY 55
Query: 357 REIMSLLDHPFLPTLYASFQTSTHICLITDFC-PGGE-LFALLDKQPMKIFREDSARFYA 414
R L +P +Y + ++ + P E LF L D+ F + A
Sbjct: 56 RFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDR----TFSLKTVLMIA 111
Query: 415 AEVVIGLEYLHCLGIIYRDLKPENILLQKDGH-----VVLTDFDLS 455
+++ +EY+H +IYRD+KPEN L+ + G+ + + DF L+
Sbjct: 112 IQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 157
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
K ++ LG G G V + G ++ A+K++++ M E +M L H
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQR 75
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEYLHC 426
L LYA T I +IT++ G L L K P I + AA++ G+ ++
Sbjct: 76 LVRLYAVV-TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+RDL+ NIL+ + DF L+
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLA 162
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
K ++ LG G G V + G ++ A+K++++ M E +M L H
Sbjct: 20 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQR 74
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEYLHC 426
L LYA T I +IT++ G L L K P I + AA++ G+ ++
Sbjct: 75 LVRLYAVV-TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE 132
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+RDL+ NIL+ + DF L+
Sbjct: 133 RNYIHRDLRAANILVSDTLSCKIADFGLA 161
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
K ++ LG G G V + G ++ A+K++++ M E +M L H
Sbjct: 25 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQR 79
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEYLHC 426
L LYA T I +IT++ G L L K P I + AA++ G+ ++
Sbjct: 80 LVRLYAVV-TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+RDL+ NIL+ + DF L+
Sbjct: 138 RNYIHRDLRAANILVSDTLSCKIADFGLA 166
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
K ++ LG G G V + G ++ A+K++++ M E +M L H
Sbjct: 23 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQR 77
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEYLHC 426
L LYA T I +IT++ G L L K P I + AA++ G+ ++
Sbjct: 78 LVRLYAVV-TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+RDL+ NIL+ + DF L+
Sbjct: 136 RNYIHRDLRAANILVSDTLSCKIADFGLA 164
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 399 KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILL-QKDGHVVLTDFDLSFM 457
KQ +I + RFY E++ L+Y H GI++RD+KP N+++ + + L D+ L+
Sbjct: 128 KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLA-- 185
Query: 458 TSCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
P Y+ V YF + L Y Y
Sbjct: 186 EFYHPAQEYNVRVASRYFKGPELLVDYQMY 215
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
K ++ LG G G V + G ++ A+K++++ M E +M L H
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQR 75
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEYLHC 426
L LYA T I +IT++ G L L K P I + AA++ G+ ++
Sbjct: 76 LVRLYAVV-TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+RDL+ NIL+ + DF L+
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLA 162
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
K ++ LG G G V + G ++ A+K++++ M E +M L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQR 69
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEYLHC 426
L LYA T I +IT++ G L L K P I + AA++ G+ ++
Sbjct: 70 LVRLYAVV-TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+RDL+ NIL+ + DF L+
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
K ++ LG G G V + G ++ A+K++++ M E +M L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQR 69
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEYLHC 426
L LYA T I +IT++ G L L K P I + AA++ G+ ++
Sbjct: 70 LVRLYAVV-TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+RDL+ NIL+ + DF L+
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
K ++ LG G G V + G ++ A+K++++ M E +M L H
Sbjct: 16 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQR 70
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEYLHC 426
L LYA T I +IT++ G L L K P I + AA++ G+ ++
Sbjct: 71 LVRLYAVV-TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE 128
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+RDL+ NIL+ + DF L+
Sbjct: 129 RNYIHRDLRAANILVSDTLSCKIADFGLA 157
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
K ++ LG G G V + G ++ A+K++++ M E +M L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQR 69
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEYLHC 426
L LYA T I +IT++ G L L K P I + AA++ G+ ++
Sbjct: 70 LVRLYAVV-TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+RDL+ NIL+ + DF L+
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 111 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXD 167
Query: 452 FDLS 455
F L+
Sbjct: 168 FGLA 171
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 111 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 452 FDLS 455
F L+
Sbjct: 168 FGLA 171
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 111 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 452 FDLS 455
F L+
Sbjct: 168 FGLA 171
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 115 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 452 FDLS 455
F L+
Sbjct: 172 FGLA 175
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 115 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 452 FDLS 455
F L+
Sbjct: 172 FGLA 175
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 113 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 452 FDLS 455
F L+
Sbjct: 170 FGLA 173
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEV 417
M DHP + L T + +I + C GEL + L ++ + D A YA ++
Sbjct: 68 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQL 123
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L YL ++RD+ N+L+ + V L DF LS
Sbjct: 124 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 161
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 334 YAMKAMEKSVMLNRNKVHRACIEREIM-SLLDHPFLPTLYASFQTSTHICLITDFCPGGE 392
YA+K +EK R++V R E E++ H + L F+ L+ + GG
Sbjct: 41 YAVKIIEKQPGHIRSRVFR---EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97
Query: 393 LFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV---L 449
+ + + K+ + F E A +V L++LH GI +RDLKPENIL + V +
Sbjct: 98 ILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKI 155
Query: 450 TDFDLS 455
DF L
Sbjct: 156 CDFGLG 161
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
K ++ LG G G V + G ++ A+K++++ M E +M L H
Sbjct: 24 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQR 78
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEYLHC 426
L LYA T I +IT++ G L L K P I + AA++ G+ ++
Sbjct: 79 LVRLYAVV-TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE 136
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+RDL+ NIL+ + DF L+
Sbjct: 137 RNYIHRDLRAANILVSDTLSCKIADFGLA 165
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
K ++ LG G G V + G ++ A+K++++ M E +M L H
Sbjct: 17 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQR 71
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEYLHC 426
L LYA T I +IT++ G L L K P I + AA++ G+ ++
Sbjct: 72 LVRLYAVV-TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE 129
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+RDL+ NIL+ + DF L+
Sbjct: 130 RNYIHRDLRAANILVSDTLSCKIADFGLA 158
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 109 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 452 FDLS 455
F L+
Sbjct: 166 FGLA 169
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 115 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 452 FDLS 455
F L+
Sbjct: 172 FGLA 175
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 131 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 187
Query: 452 FDLS 455
F L+
Sbjct: 188 FGLA 191
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 113 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 452 FDLS 455
F L+
Sbjct: 170 FGLA 173
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 115 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 452 FDLS 455
F L+
Sbjct: 172 FGLA 175
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 116 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 452 FDLS 455
F L+
Sbjct: 173 FGLA 176
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 117 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 173
Query: 452 FDLS 455
F L+
Sbjct: 174 FGLA 177
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 108 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 164
Query: 452 FDLS 455
F L+
Sbjct: 165 FGLA 168
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEV 417
M DHP + L T + +I + C GEL + L ++ + D A YA ++
Sbjct: 62 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQL 117
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L YL ++RD+ N+L+ + V L DF LS
Sbjct: 118 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 6/142 (4%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G G V + G + A+K ++ M + A ++M L H L LYA
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEA----QVMKKLRHEKLVQLYA 80
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
+ I ++ ++ G L L + K R AA++ G+ Y+ + ++RD
Sbjct: 81 VV-SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L+ NIL+ ++ + DF L+
Sbjct: 140 LRAANILVGENLVCKVADFGLA 161
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 115 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 452 FDLS 455
F L+
Sbjct: 172 FGLA 175
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 116 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 452 FDLS 455
F L+
Sbjct: 173 FGLA 176
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 111 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 452 FDLS 455
F L+
Sbjct: 168 FGLA 171
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEV 417
M DHP + L T + +I + C GEL + L ++ + D A YA ++
Sbjct: 67 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQL 122
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L YL ++RD+ N+L+ + V L DF LS
Sbjct: 123 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 160
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 109 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 452 FDLS 455
F L+
Sbjct: 166 FGLA 169
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEV 417
M DHP + L T + +I + C GEL + L ++ + D A YA ++
Sbjct: 70 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQL 125
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L YL ++RD+ N+L+ + V L DF LS
Sbjct: 126 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEV 417
M DHP + L T + +I + C GEL + L ++ + D A YA ++
Sbjct: 93 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQL 148
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L YL ++RD+ N+L+ + V L DF LS
Sbjct: 149 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 119 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 175
Query: 452 FDLS 455
F L+
Sbjct: 176 FGLA 179
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 111 DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 452 FDLS 455
F L+
Sbjct: 168 FGLA 171
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARF--YAAEV 417
M DHP + L T + +I + C GEL + L ++ + D A YA ++
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQL 120
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L YL ++RD+ N+L+ + V L DF LS
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+L+ + + D
Sbjct: 131 DLYKLLKSQQLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICD 187
Query: 452 FDLS 455
F L+
Sbjct: 188 FGLA 191
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
K ++ LG G G V + G ++ A+K++++ M E +M L H
Sbjct: 10 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQR 64
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEYLHC 426
L LYA T I +IT++ G L L K P I + AA++ G+ ++
Sbjct: 65 LVRLYAVV-TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+RDL+ NIL+ + DF L+
Sbjct: 123 RNYIHRDLRAANILVSDTLSCKIADFGLA 151
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 6/145 (4%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
+K LG G G V L + +G ++ A+K +++ M A + M L HP L
Sbjct: 13 LKELGSGQFGVVKLGKWKGQYDV-AVKMIKEGSMSEDEFFQEA----QTMMKLSHPKLVK 67
Query: 371 LYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGII 430
Y I ++T++ G L L + K +V G+ +L I
Sbjct: 68 FYGVCSKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQFI 126
Query: 431 YRDLKPENILLQKDGHVVLTDFDLS 455
+RDL N L+ +D V ++DF ++
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMT 151
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
F+ + S +ST + LIT + G L+ L + S + GL +LH
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV---SCLRIVLSIASGLAHLHI 123
Query: 427 L--------GIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459
I +RDLK +NIL++K+G + D L+ M S
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS 164
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 4/151 (2%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
K + +G G GSV+ + + +G++ A+K + +V K ++ +M D P+
Sbjct: 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV-VMRSSDCPY 82
Query: 368 LPTLYASF--QTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL- 424
+ Y + + IC+ + + + + E+ V L +L
Sbjct: 83 IVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK 142
Query: 425 HCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
L II+RD+KP NILL + G++ L DF +S
Sbjct: 143 ENLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451
+L+ LL Q + D ++ +++ GL+Y+H +++RDLKP N+LL + + D
Sbjct: 115 DLYKLLKCQHLS---NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 452 FDLS 455
F L+
Sbjct: 172 FGLA 175
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G VHL A+K + + + + R E + + L+HP + +YA
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 374 SFQTSTHIC----LITDFCPGGELFALLDKQ-PMKIFREDSARFYAAEVVIGLEYLHCLG 428
+ + T ++ ++ G L ++ + PM R A A+ L + H G
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR---AIEVIADACQALNFSHQNG 136
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
II+RD+KP NI++ V + DF ++
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIA 163
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
F+ + S +ST + LIT + G L+ L + S + GL +LH
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV---SCLRIVLSIASGLAHLHI 123
Query: 427 L--------GIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459
I +RDLK +NIL++K+G + D L+ M S
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS 164
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 335 AMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELF 394
A+K +K L+ + + E IM LDHP + L + +I + P GEL
Sbjct: 56 AVKTCKKDCTLDNKEKFMS--EAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELG 112
Query: 395 ALLD--KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDF 452
L+ K +K+ + Y+ ++ + YL + ++RD+ NIL+ V L DF
Sbjct: 113 HYLERNKNSLKVL---TLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDF 169
Query: 453 DLS 455
LS
Sbjct: 170 GLS 172
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 288 SSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNR 347
S+ I + K +K ++ ++ I+ L G + L E + YA+K EKS++ +
Sbjct: 14 SNLIYLNKYVKEKDKY-INDYRIIRTLNQGKFNKIILCE--KDNKFYALKKYEKSLLEKK 70
Query: 348 NKVHRACIER--------------EIMSLLDHPFLPTLYASFQTSTHICLITDFCPGG-- 391
++ ++ +I++ + + + T + +I ++
Sbjct: 71 RDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI 130
Query: 392 ----ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDGH 446
E F +LDK + V+ Y+H I +RD+KP NIL+ K+G
Sbjct: 131 LKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGR 190
Query: 447 VVLTDF 452
V L+DF
Sbjct: 191 VKLSDF 196
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 335 AMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELF 394
A+K +K L+ + + E IM LDHP + L + +I + P GEL
Sbjct: 40 AVKTCKKDCTLDNKEKFMS--EAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELG 96
Query: 395 ALLD--KQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDF 452
L+ K +K+ + Y+ ++ + YL + ++RD+ NIL+ V L DF
Sbjct: 97 HYLERNKNSLKVL---TLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDF 153
Query: 453 DLS 455
LS
Sbjct: 154 GLS 156
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 335 AMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELF 394
A+K +K L+ + + E IM LDHP + L + +I + P GEL
Sbjct: 44 AVKTCKKDCTLDNKEKFMS--EAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELG 100
Query: 395 ALL--DKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDF 452
L +K +K+ + Y+ ++ + YL + ++RD+ NIL+ V L DF
Sbjct: 101 HYLERNKNSLKVL---TLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDF 157
Query: 453 DLS 455
LS
Sbjct: 158 GLS 160
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 3/142 (2%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
+G G+ G V L+ L A+K+ ++ L + + E I+ HP + L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
I ++ + GG+ L + ++ R + + G+EYL I+RD
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARL-RVKTLLQMVGDAAAGMEYLESKCCIHRD 238
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L N L+ + + ++DF +S
Sbjct: 239 LAARNCLVTEKNVLKISDFGMS 260
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 3/142 (2%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
+G G+ G V L+ L A+K+ ++ L + + E I+ HP + L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRD 433
I ++ + GG+ L + ++ R + + G+EYL I+RD
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARL-RVKTLLQMVGDAAAGMEYLESKCCIHRD 238
Query: 434 LKPENILLQKDGHVVLTDFDLS 455
L N L+ + + ++DF +S
Sbjct: 239 LAARNCLVTEKNVLKISDFGMS 260
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
F+ + S +ST + LIT + G L+ L + S + GL +LH
Sbjct: 96 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV---SCLRIVLSIASGLAHLHI 152
Query: 427 L--------GIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459
I +RDLK +NIL++K+G + D L+ M S
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS 193
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF--LP 369
K +GCG+ G EL+ LY + + + +++ + +E L LP
Sbjct: 6 KKIGCGNFG-----ELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAGEGLP 60
Query: 370 TLYASFQTSTHICLITDFC-PGGE-LFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
+Y + ++ + P E LF L D+ F + A +++ +EY+H
Sbjct: 61 QVYYFGPXGKYNAMVLELLGPSLEDLFDLCDR----TFTLKTVLMIAIQLLSRMEYVHSK 116
Query: 428 GIIYRDLKPENILLQKDG----HVV-LTDFDLS 455
+IYRD+KPEN L+ + G HV+ + DF L+
Sbjct: 117 NLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE-REIMSLLDH 365
+F+ K +GCG+ G EL+ LY + + + +++ + +E R L
Sbjct: 31 NFRVGKKIGCGNFG-----ELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSG 85
Query: 366 PFLPTLYASFQTSTHICLITDFC-PGGE-LFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
+P +Y + ++ + P E LF L D+ F + A +++ +EY
Sbjct: 86 DGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDR----TFSLKTVLMIAIQLISRMEY 141
Query: 424 LHCLGIIYRDLKPENILLQKDGH-----VVLTDFDLS 455
+H +IYRD+KPEN L+ + G+ + + DF L+
Sbjct: 142 VHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 178
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE-REIMSLLDH 365
+F+ K +GCG+ G EL+ LY + + + +++ + +E R L
Sbjct: 10 NFRVGKKIGCGNFG-----ELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSG 64
Query: 366 PFLPTLYASFQTSTHICLITDFC-PGGE-LFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
+P +Y + ++ + P E LF L D+ F + A +++ +EY
Sbjct: 65 DGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDR----TFSLKTVLMIAIQLISRMEY 120
Query: 424 LHCLGIIYRDLKPENILLQKDGH-----VVLTDFDLS 455
+H +IYRD+KPEN L+ + G+ + + DF L+
Sbjct: 121 VHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN--RNKVHRACI-EREIMSLLDHPF- 367
KPLG G G V + G + + + ++ + HRA + E +I+ + H
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 368 -LPTLYASFQTSTHICLITDFCPGGELFALLDKQ-----PMKIFREDSAR---------F 412
+ L A + + +I +FC G L L + P K+ ED +
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+ +V G+E+L I+RDL NILL + V + DF L+
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 186
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN--RNKVHRACI-EREIMSLLDHPF- 367
KPLG G G V + G + + + ++ + HRA + E +I+ + H
Sbjct: 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 129
Query: 368 -LPTLYASFQTSTHICLITDFCPGGELFALLDKQ-----PMKIFREDSAR---------F 412
+ L A + + +I +FC G L L + P K+ ED +
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+ +V G+E+L I+RDL NILL + V + DF L+
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 232
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN--RNKVHRACI-EREIMSLLDHPF- 367
KPLG G G V + G + + + ++ + HRA + E +I+ + H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 368 -LPTLYASFQTSTHICLITDFCPGGELFALLDKQ-----PMKIFREDSAR---------F 412
+ L A + + +I +FC G L L + P K+ ED +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+ +V G+E+L I+RDL NILL + V + DF L+
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 18/159 (11%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHR-----ACIEREIMSLL-DH 365
K LG G G V G G+ A+ ++ +V + ++ H E +IMS L H
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAV--LKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSAR--------FYAAEV 417
+ L + + +IT++C G+L L ++ ++ R ++++V
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTDFDLS 455
G+ +L I+RD+ N+LL +GHV + DF L+
Sbjct: 170 AQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLA 207
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN--RNKVHRACI-EREIMSLLDHPF- 367
KPLG G G V + G + + + ++ + HRA + E +I+ + H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 368 -LPTLYASFQTSTHICLITDFCPGGELFALLDKQ-----PMKIFREDSAR---------F 412
+ L A + + +I +FC G L L + P K+ ED +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+ +V G+E+L I+RDL NILL + V + DF L+
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIE-REIMSLLDH 365
+F+ K +GCG+ G EL+ LY + + + +++ + +E R L
Sbjct: 5 NFRVGKKIGCGNFG-----ELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSAT 59
Query: 366 PFLPTLYASFQTSTHICLITDFC-PGGE-LFALLDKQPMKIFREDSARFYAAEVVIGLEY 423
+P +Y + ++ + P E LF L D+ F + A +++ +EY
Sbjct: 60 EGVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDR----TFTLKTVLMIAIQLITRMEY 115
Query: 424 LHCLGIIYRDLKPENILLQKDG----HVV-LTDFDLS 455
+H +IYRD+KPEN L+ + G H + + DF L+
Sbjct: 116 VHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLA 152
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN--RNKVHRACI-EREIMSLLDHPF- 367
KPLG G G V + G + + + ++ + HRA + E +I+ + H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 368 -LPTLYASFQTSTHICLITDFCPGGELFALLDKQ-----PMKIFREDSAR---------F 412
+ L A + + +I +FC G L L + P K+ ED +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+ +V G+E+L I+RDL NILL + V + DF L+
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G VHL A+K + + + + R E + + L+HP + +Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 374 SFQTSTHIC----LITDFCPGGELFALLDKQ-PMKIFREDSARFYAAEVVIGLEYLHCLG 428
+ + T ++ ++ G L ++ + PM R A A+ L + H G
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR---AIEVIADACQALNFSHQNG 136
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
II+RD+KP NIL+ V + DF ++
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIA 163
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 18/159 (11%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHR-----ACIEREIMSLL-DH 365
K LG G G V G G+ A+ ++ +V + ++ H E +IMS L H
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAV--LKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSAR--------FYAAEV 417
+ L + + +IT++C G+L L ++ ++ R ++++V
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 418 VIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTDFDLS 455
G+ +L I+RD+ N+LL +GHV + DF L+
Sbjct: 162 AQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLA 199
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF 367
K ++ LG G G V + G ++ A+K++++ M E +M L H
Sbjct: 11 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQR 65
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEYLHC 426
L LYA T I +IT++ G L L K P I + AA++ G+ ++
Sbjct: 66 LVRLYAVV-TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 427 LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I+R+L+ NIL+ + DF L+
Sbjct: 124 RNYIHRNLRAANILVSDTLSCKIADFGLA 152
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 365 HPFLPTLYASFQTSTHICLITDF-CPGGELFALL-DKQPMKIFREDSARFYAAEVVIGLE 422
HP + L F+T L+ + P +LF + +K P+ E +R + +VV ++
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLG---EGPSRCFFGQVVAAIQ 153
Query: 423 YLHCLGIIYRDLKPENILLQ-KDGHVVLTDF 452
+ H G+++RD+K ENIL+ + G L DF
Sbjct: 154 HCHSRGVVHRDIKDENILIDLRRGCAKLIDF 184
>pdb|2L1M|A Chain A, Solution Structure Of The Eag Domain Of The Herg (Kv11.1)
K+ Channel
Length = 150
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 65 QGIDLATTLERIE---KNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCS 116
Q L T + + E + F+I + R+ + +I+ +D F EL Y+R E++ R C+
Sbjct: 11 QNTFLDTIIRKFEGQSRKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCT 65
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN--RNKVHRACI-EREIMSLLDHPF- 367
KPLG G G V + G + + + ++ + HRA + E +I+ + H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 368 -LPTLYASFQTSTHICLITDFCPGGELFALLDKQ-----PMKIFREDSARF-----YAAE 416
+ L A + + +I +FC G L L + P K +D Y+ +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
V G+E+L I+RDL NILL + V + DF L+
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLA 191
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 17/150 (11%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAME---KSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
LG G G V + GE+ A+K +E K + R E +I+ H + T
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLF-----ALRTLREIKILKHFKHENIIT 73
Query: 371 LYA-----SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH 425
++ SF+ + +I + +L ++ Q + +D +++ + + ++ LH
Sbjct: 74 IFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLH 129
Query: 426 CLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+I+RDLKP N+L+ + + + DF L+
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 17/150 (11%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAME---KSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
LG G G V + GE+ A+K +E K + R E +I+ H + T
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLF-----ALRTLREIKILKHFKHENIIT 73
Query: 371 LYA-----SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH 425
++ SF+ + +I + +L ++ Q + +D +++ + + ++ LH
Sbjct: 74 IFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLH 129
Query: 426 CLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+I+RDLKP N+L+ + + + DF L+
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 17/150 (11%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAME---KSVMLNRNKVHRACIEREIMSLLDHPFLPT 370
LG G G V + GE+ A+K +E K + R E +I+ H + T
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLF-----ALRTLREIKILKHFKHENIIT 73
Query: 371 LYA-----SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH 425
++ SF+ + +I + +L ++ Q + +D +++ + + ++ LH
Sbjct: 74 IFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLH 129
Query: 426 CLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+I+RDLKP N+L+ + + + DF L+
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|2L0W|A Chain A, Solution Nmr Structure Of The N-Terminal Pas Domain Of
Herg Potassium Channel
Length = 138
Score = 38.5 bits (88), Expect = 0.008, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 65 QGIDLATTLERIE---KNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCS 116
Q L T + + E + F+I + R+ + +I+ +D F EL Y+R E++ R C+
Sbjct: 14 QNTFLDTIIRKFEGQSRKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCT 68
>pdb|2L4R|A Chain A, Nmr Solution Structure Of The N-Terminal Pas Domain Of
Herg
Length = 135
Score = 38.5 bits (88), Expect = 0.008, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 65 QGIDLATTLERIE---KNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCS 116
Q L T + + E + F+I + R+ + +I+ +D F EL Y+R E++ R C+
Sbjct: 11 QNTFLDTIIRKFEGQSRKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCT 65
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 356 EREIMSLLDH-PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSA---- 410
E E++ L H P + L + + ++ L ++ P G L L K ++ D A
Sbjct: 75 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKS--RVLETDPAFAIA 132
Query: 411 ------------RFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+AA+V G++YL I+RDL NIL+ ++ + DF LS
Sbjct: 133 NSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 189
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 15/150 (10%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF-LPT 370
+ +G G G ++L AGE A+K + V ++H IE +I ++ +PT
Sbjct: 15 RKIGSGSFGDIYLGTDIAAGEEVAIKL--ECVKTKHPQLH---IESKIYKMMQGGVGIPT 69
Query: 371 L-YASFQTSTHICLITDFCPGGE-LFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
+ + + ++ ++ P E LF ++ F + A +++ +EY+H
Sbjct: 70 IRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMISRIEYIHSKN 125
Query: 429 IIYRDLKPENIL--LQKDGHVV-LTDFDLS 455
I+RD+KP+N L L K G++V + DF L+
Sbjct: 126 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 356 EREIMSLLDH-PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSA---- 410
E E++ L H P + L + + ++ L ++ P G L L K ++ D A
Sbjct: 65 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKS--RVLETDPAFAIA 122
Query: 411 ------------RFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+AA+V G++YL I+RDL NIL+ ++ + DF LS
Sbjct: 123 NSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 179
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 377 TSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL--------G 428
T T + L++D+ G LF L++ + + + A GL +LH
Sbjct: 73 TWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPA 129
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RDLK +NIL++K+G + D L+
Sbjct: 130 IAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 15/150 (10%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF-LPT 370
+ +G G G ++L AGE A+K + V ++H IE +I ++ +PT
Sbjct: 13 RKIGSGSFGDIYLGTDIAAGEEVAIKL--ECVKTKHPQLH---IESKIYKMMQGGVGIPT 67
Query: 371 L-YASFQTSTHICLITDFCPGGE-LFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
+ + + ++ ++ P E LF ++ F + A +++ +EY+H
Sbjct: 68 IRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMISRIEYIHSKN 123
Query: 429 IIYRDLKPENIL--LQKDGHVV-LTDFDLS 455
I+RD+KP+N L L K G++V + DF L+
Sbjct: 124 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN--RNKVHRACI-EREIMSLLDHPF- 367
KPLG G G V + G + + + ++ + HRA + E +I+ + H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 368 -LPTLYASFQTSTHICLITDFCPGGELFALLDKQ-----PMKIFREDSARF-----YAAE 416
+ L A + + +I +FC G L L + P K +D Y+ +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
V G+E+L I+RDL NILL + V + DF L+
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLA 191
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G VHL A+K + + + + R E + + L+HP + +Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 374 SFQTSTHIC----LITDFCPGGELFALLDKQ-PMKIFREDSARFYAAEVVIGLEYLHCLG 428
+ + T ++ ++ G L ++ + PM R A A+ L + H G
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR---AIEVIADACQALNFSHQNG 136
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
II+RD+KP NI++ V + DF ++
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIA 163
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 377 TSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL--------G 428
T T + L++D+ G LF L++ + + + A GL +LH
Sbjct: 72 TWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPA 128
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RDLK +NIL++K+G + D L+
Sbjct: 129 IAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G VHL A+K + + + + R E + + L+HP + +Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 374 SFQTSTHIC----LITDFCPGGELFALLDKQ-PMKIFREDSARFYAAEVVIGLEYLHCLG 428
+ + T ++ ++ G L ++ + PM R A A+ L + H G
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR---AIEVIADACQALNFSHQNG 136
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
II+RD+KP NI++ V + DF ++
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIA 163
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 377 TSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL--------G 428
T T + L++D+ G LF L++ + + + A GL +LH
Sbjct: 78 TWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPA 134
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RDLK +NIL++K+G + D L+
Sbjct: 135 IAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 377 TSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL--------G 428
T T + L++D+ G LF L++ + + + A GL +LH
Sbjct: 75 TWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPA 131
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RDLK +NIL++K+G + D L+
Sbjct: 132 IAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 11/101 (10%)
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
F+ + S +ST + LIT + G L+ L +Q ++ A A GL +LH
Sbjct: 67 FIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLE---PHLALRLAVSAACGLAHLHV 123
Query: 427 --------LGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459
I +RD K N+L++ + + D L+ M S
Sbjct: 124 EIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHS 164
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G VHL A+K + + + + R E + + L+HP + +Y
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 374 SFQTSTHIC----LITDFCPGGELFALLDKQ-PMKIFREDSARFYAAEVVIGLEYLHCLG 428
+ + T ++ ++ G L ++ + PM R A A+ L + H G
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR---AIEVIADACQALNFSHQNG 136
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
II+RD+KP NI++ V + DF ++
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIA 163
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 377 TSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL--------G 428
T T + L++D+ G LF L++ + + + A GL +LH
Sbjct: 98 TWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPA 154
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RDLK +NIL++K+G + D L+
Sbjct: 155 IAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454
++ +E+LH G+++RDLKP NI D V + DF L
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 210
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA 373
LG G VHL A+K + + + + R E + + L+HP + +Y
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 96
Query: 374 SFQTSTHIC----LITDFCPGGELFALLDKQ-PMKIFREDSARFYAAEVVIGLEYLHCLG 428
+ + T ++ ++ G L ++ + PM R A A+ L + H G
Sbjct: 97 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR---AIEVIADACQALNFSHQNG 153
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
II+RD+KP NI++ V + DF ++
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIA 180
>pdb|1BYW|A Chain A, Structure Of The N-Terminal Domain Of The Human-Erg
Potassium Channel
Length = 110
Score = 37.7 bits (86), Expect = 0.013, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 25/39 (64%)
Query: 78 KNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCS 116
+ F+I + R+ + +I+ +D F EL Y+R E++ R C+
Sbjct: 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCT 40
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 377 TSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL--------G 428
T T + L++D+ G LF L++ + + + A GL +LH
Sbjct: 111 TWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPA 167
Query: 429 IIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RDLK +NIL++K+G + D L+
Sbjct: 168 IAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 359 IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVV 418
I+ LLDH H+ ++ + G L AL+ K + + + +++
Sbjct: 88 ILKLLDH-----FNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLL 141
Query: 419 IGLEYLH--CLGIIYRDLKPENILLQ 442
+GL+Y+H C GII+ D+KPEN+L++
Sbjct: 142 LGLDYMHRRC-GIIHTDIKPENVLME 166
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 359 IMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVV 418
I+ LLDH H+ ++ + G L AL+ K + + + +++
Sbjct: 88 ILKLLDH-----FNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLL 141
Query: 419 IGLEYLH--CLGIIYRDLKPENILLQ 442
+GL+Y+H C GII+ D+KPEN+L++
Sbjct: 142 LGLDYMHRRC-GIIHTDIKPENVLME 166
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 22/163 (13%)
Query: 312 KPLGCGDTGSVHLVELQGAGE-----LYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHP 366
+ LG G G V L E L A+KA++ + R R E E+++ L H
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQR---EAELLTNLQHE 77
Query: 367 FLPTLYASFQTSTHICLITDFCPGGEL-----------FALLDKQPMKIFRE---DSARF 412
+ Y + ++ ++ G+L L+D QP + E
Sbjct: 78 HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
A+++ G+ YL ++RDL N L+ + V + DF +S
Sbjct: 138 IASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 17/122 (13%)
Query: 334 YAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASF--QTSTHICLITDFCPGG 391
YA+K +E + + AC E ++ L HP + +L F + L+ D+
Sbjct: 51 YALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA-EH 104
Query: 392 ELFALL--------DKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQK 443
+L+ ++ +K+P+++ R + +++ G+ YLH +++RDLKP NIL+
Sbjct: 105 DLWHIIKFHRASKANKKPVQLPR-GMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMG 163
Query: 444 DG 445
+G
Sbjct: 164 EG 165
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 17/164 (10%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACI--EREIMSLLDHPFLP 369
K +G G+ G V+ L+ + + K++ + R E IM H +
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 370 TLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVV-------IGLE 422
L + +IT++ G L K RE F ++V G++
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALD--------KFLREKDGEFSVLQLVGMLRGIAAGMK 161
Query: 423 YLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFY 466
YL + ++RDL NIL+ + ++DF LS + P+ Y
Sbjct: 162 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATY 205
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN--RNKVHRACI-EREIMSLLDHPF- 367
KPLG G G V + G + + + ++ + HRA + E +I+ + H
Sbjct: 34 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 93
Query: 368 -LPTLYASFQTSTHICLITDFCPGGELFALLD---------KQPMKIFRE----DSARFY 413
+ L A + + +I +FC G L L K P ++++ + Y
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICY 153
Query: 414 AAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ +V G+E+L I+RDL NILL + V + DF L+
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDK-----QPMKIFREDSARFYAAEVV 418
DHP + Y S T + + + C L L++ + +K+ +E + ++
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 419 IGLEYLHCLGIIYRDLKPENILL 441
G+ +LH L II+RDLKP+NIL+
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILV 166
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 24/164 (14%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHR-----ACIEREIMSLL-DH 365
K LG G G V G G+ A+ ++ +V + ++ H E +IMS L H
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAV--LKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSA-------------RF 412
+ L + + +IT++C G+L L ++ ++ D A
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS-RVLETDPAFAIANSTLSTRDLLH 168
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTDFDLS 455
++++V G+ +L I+RD+ N+LL +GHV + DF L+
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLA 211
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 24/164 (14%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHR-----ACIEREIMSLL-DH 365
K LG G G V G G+ A+ ++ +V + ++ H E +IMS L H
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAV--LKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSA-------------RF 412
+ L + + +IT++C G+L L ++ ++ D A
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS-RVLETDPAFAIANSTASTRDLLH 168
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTDFDLS 455
++++V G+ +L I+RD+ N+LL +GHV + DF L+
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLA 211
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDK-----QPMKIFREDSARFYAAEVV 418
DHP + Y S T + + + C L L++ + +K+ +E + ++
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 419 IGLEYLHCLGIIYRDLKPENILL 441
G+ +LH L II+RDLKP+NIL+
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILV 166
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 17/161 (10%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN--RNKVHRACI-EREIMSLLDHPF- 367
KPLG G G V + G + + + ++ + HRA + E +I+ + H
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 368 -LPTLYASFQTSTHICLITDFCPGGELFALLDKQ--------PMKIFRE----DSARFYA 414
+ L A + + +I +FC G L L + P ++++ + Y+
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 415 AEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V G+E+L I+RDL NILL + V + DF L+
Sbjct: 155 FQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLA 195
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 15/157 (9%)
Query: 312 KPLGCGDTGSV---HLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFL 368
K LG G+ GSV +L + G A+K M+ R ++ E M HP +
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQR-EIEEFLSEAACMKDFSHPNV 98
Query: 369 PTLYA-----SFQTSTHICLITDFCPGGEL-----FALLDKQPMKIFREDSARFYAAEVV 418
L S Q +I F G+L ++ L+ P I + +F ++
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKF-MVDIA 157
Query: 419 IGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+G+EYL ++RDL N +L+ D V + DF LS
Sbjct: 158 LGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLS 194
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 375 FQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDL 434
F+ HIC++ + G + + + FR D R A ++ + +LH + + DL
Sbjct: 86 FEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDL 144
Query: 435 KPENILL 441
KPENIL
Sbjct: 145 KPENILF 151
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 375 FQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDL 434
F+ HIC++ + G + + + FR D R A ++ + +LH + + DL
Sbjct: 86 FEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDL 144
Query: 435 KPENILL 441
KPENIL
Sbjct: 145 KPENILF 151
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 19/163 (11%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN--RNKVHRACI-EREIMSLLDHPF- 367
KPLG G G V + G + + + ++ + HRA + E +I+ + H
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 368 -LPTLYASFQTSTHICLITDFCPGGELFALLDKQ-----PMKIFREDSAR---------F 412
+ L A + + +I +FC G L L + P K ED +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+ +V G+E+L I+RDL NILL + V + DF L+
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 197
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 19/156 (12%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAM---EKSVMLNRNKVHRACIEREIMSLLDHPF 367
+K +G G G V + + +G E A+K E++ ++++ + R L F
Sbjct: 42 VKQIGKGRYGEVWMGKWRG--EKVAVKVFFTTEEASWFRETEIYQTVLMRHENIL---GF 96
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC- 426
+ + T + LITD+ G L+ L + S A V GL +LH
Sbjct: 97 IAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLD---AKSMLKLAYSSVSGLCHLHTE 153
Query: 427 -------LGIIYRDLKPENILLQKDGHVVLTDFDLS 455
I +RDLK +NIL++K+G + D L+
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDK-----QPMKIFREDSARFYAAEVV 418
DHP + Y S T + + + C L L++ + +K+ +E + ++
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 419 IGLEYLHCLGIIYRDLKPENILL 441
G+ +LH L II+RDLKP+NIL+
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNILV 148
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALL---DKQPMKIFREDSARFYAAE 416
+S HP L +L + LI + G L L D M + E
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG- 147
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
GL YLH II+RD+K NILL ++ +TDF +S
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS 186
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDK-----QPMKIFREDSARFYAAEVV 418
DHP + Y S T + + + C L L++ + +K+ +E + ++
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 419 IGLEYLHCLGIIYRDLKPENILL 441
G+ +LH L II+RDLKP+NIL+
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNILV 148
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Query: 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALL---DKQPMKIFREDSARFYAAE 416
+S HP L +L + LI + G L L D M + E
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG- 147
Query: 417 VVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
GL YLH II+RD+K NILL ++ +TDF +S
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS 186
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 356 EREIMSLLDH-PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSA---- 410
E E++ L H P + L + + ++ L ++ P G L L K ++ D A
Sbjct: 72 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKS--RVLETDPAFAIA 129
Query: 411 ------------RFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+AA+V G++YL I+R+L NIL+ ++ + DF LS
Sbjct: 130 NSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS 186
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E +M LD+P++ + + + + L+ + G L L Q + ++ +
Sbjct: 421 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVH 477
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYF 475
+V +G++YL ++RDL N+LL + ++DF LS + +Y A +G +
Sbjct: 478 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWP 536
Query: 476 IMYKW 480
+ KW
Sbjct: 537 V--KW 539
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 22/80 (27%)
Query: 384 ITDFCPGGELFALLD-------KQPMKIFR---------------EDSARFYAAEVVIGL 421
+ + C G + LLD K P IF + R+Y E++ L
Sbjct: 80 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKAL 139
Query: 422 EYLHCLGIIYRDLKPENILL 441
+Y H GI++RD+KP N+++
Sbjct: 140 DYCHSQGIMHRDVKPHNVMI 159
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 23/31 (74%)
Query: 411 RFYAAEVVIGLEYLHCLGIIYRDLKPENILL 441
R+Y E++ L+Y H GI++RD+KP N+++
Sbjct: 129 RYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E +M LD+P++ + + + + L+ + G L L Q + ++ +
Sbjct: 420 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVH 476
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYF 475
+V +G++YL ++RDL N+LL + ++DF LS + +Y A +G +
Sbjct: 477 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWP 535
Query: 476 IMYKW 480
+ KW
Sbjct: 536 V--KW 538
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 22/80 (27%)
Query: 384 ITDFCPGGELFALLD-------KQPMKIFR---------------EDSARFYAAEVVIGL 421
+ + C G + LLD K P IF + R+Y E++ L
Sbjct: 81 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKAL 140
Query: 422 EYLHCLGIIYRDLKPENILL 441
+Y H GI++RD+KP N+++
Sbjct: 141 DYCHSQGIMHRDVKPHNVMI 160
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 12/83 (14%)
Query: 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL---------GIIYRD 433
L+ ++ P G L L S R A V GL YLH I +RD
Sbjct: 89 LVMEYYPNGSLXKYLSLHTSDWV--SSCRL-AHSVTRGLAYLHTELPRGDHYKPAISHRD 145
Query: 434 LKPENILLQKDGHVVLTDFDLSF 456
L N+L++ DG V++DF LS
Sbjct: 146 LNSRNVLVKNDGTCVISDFGLSM 168
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 23/31 (74%)
Query: 411 RFYAAEVVIGLEYLHCLGIIYRDLKPENILL 441
R+Y E++ L+Y H GI++RD+KP N+++
Sbjct: 149 RYYIYELLKALDYCHSQGIMHRDVKPHNVMI 179
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 23/31 (74%)
Query: 411 RFYAAEVVIGLEYLHCLGIIYRDLKPENILL 441
R+Y E++ L+Y H GI++RD+KP N+++
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 22/80 (27%)
Query: 384 ITDFCPGGELFALLD-------KQPMKIFR---------------EDSARFYAAEVVIGL 421
+ + C G + LLD K P IF + R+Y E++ L
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKAL 138
Query: 422 EYLHCLGIIYRDLKPENILL 441
+Y H GI++RD+KP N+++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI 158
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 23/31 (74%)
Query: 411 RFYAAEVVIGLEYLHCLGIIYRDLKPENILL 441
R+Y E++ L+Y H GI++RD+KP N+++
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 14/66 (21%)
Query: 394 FALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQ-KDGH----VV 448
FA L +P+ + ++ ++ GL +LH L I++RDLKP NIL+ + H +
Sbjct: 113 FAHLGLEPITLLQQTTS---------GLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAM 163
Query: 449 LTDFDL 454
++DF L
Sbjct: 164 ISDFGL 169
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 23/31 (74%)
Query: 411 RFYAAEVVIGLEYLHCLGIIYRDLKPENILL 441
R+Y E++ L+Y H GI++RD+KP N+++
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 23/31 (74%)
Query: 411 RFYAAEVVIGLEYLHCLGIIYRDLKPENILL 441
R+Y E++ L+Y H GI++RD+KP N+++
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 80/205 (39%), Gaps = 38/205 (18%)
Query: 285 RDNSSWIAIQKITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVM 344
RD S ++ G ++G + + L G V+ + G+G YA+K + +
Sbjct: 13 RDQSDFV------GQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRL----L 62
Query: 345 LNRNKVHRACIERE--IMSLLDHPFLPTLYASFQTS--------THICLITDFCPGGELF 394
N + +RA I+ + L HP + ++ L+T+ C G +L
Sbjct: 63 SNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKG-QLV 121
Query: 395 ALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG----------IIYRDLKPENILLQKD 444
L K +S + + V+ + Y C II+RDLK EN+LL
Sbjct: 122 EFLKKM-------ESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ 174
Query: 445 GHVVLTDFDLSFMTSCKPQVFYHAH 469
G + L DF + S P + A
Sbjct: 175 GTIKLCDFGSATTISHYPDYSWSAQ 199
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 22/80 (27%)
Query: 384 ITDFCPGGELFALLD-------KQPMKIFR---------------EDSARFYAAEVVIGL 421
+ + C G + LLD K P IF + R+Y E++ L
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKAL 138
Query: 422 EYLHCLGIIYRDLKPENILL 441
+Y H GI++RD+KP N+++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI 158
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 20/145 (13%)
Query: 311 IKPLGCGDTGSVHLV-ELQG----------AGELYAMKAMEKSVMLN--RNKVHRACIER 357
I+ LG G +V L ++QG + E Y A+++ +L RN
Sbjct: 26 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNRE 85
Query: 358 EIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEV 417
++ LLD S THIC++ + G L + K + + +V
Sbjct: 86 MVVQLLD-----DFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQV 139
Query: 418 VIGLEYLHC-LGIIYRDLKPENILL 441
+ GL+YLH II+ D+KPENILL
Sbjct: 140 LQGLDYLHTKCRIIHTDIKPENILL 164
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 20/145 (13%)
Query: 311 IKPLGCGDTGSVHLV-ELQG----------AGELYAMKAMEKSVMLN--RNKVHRACIER 357
I+ LG G +V L ++QG + E Y A+++ +L RN
Sbjct: 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNRE 101
Query: 358 EIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEV 417
++ LLD S THIC++ + G L + K + + +V
Sbjct: 102 MVVQLLD-----DFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQV 155
Query: 418 VIGLEYLHC-LGIIYRDLKPENILL 441
+ GL+YLH II+ D+KPENILL
Sbjct: 156 LQGLDYLHTKCRIIHTDIKPENILL 180
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E +M LD+P++ + + + + L+ + G L L Q + ++ +
Sbjct: 76 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVH 132
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYF 475
+V +G++YL ++RDL N+LL + ++DF LS + +Y A +G +
Sbjct: 133 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWP 191
Query: 476 IMYKW 480
+ KW
Sbjct: 192 V--KW 194
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E +M LD+P++ + + + + L+ + G L L Q + ++ +
Sbjct: 68 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVH 124
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYF 475
+V +G++YL ++RDL N+LL + ++DF LS +Y A +G +
Sbjct: 125 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN-YYKAQTHGKWP 183
Query: 476 IMYKW 480
+ KW
Sbjct: 184 V--KW 186
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E +M LD+P++ + + + + L+ + G L L Q + ++ +
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVH 134
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYF 475
+V +G++YL ++RDL N+LL + ++DF LS + +Y A +G +
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWP 193
Query: 476 IMYKW 480
+ KW
Sbjct: 194 V--KW 196
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E +M LD+P++ + + + + L+ + G L L Q + ++ +
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVH 134
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYF 475
+V +G++YL ++RDL N+LL + ++DF LS + +Y A +G +
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWP 193
Query: 476 IMYKW 480
+ KW
Sbjct: 194 V--KW 196
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E +M LD+P++ + + + + L+ + G L L Q + ++ +
Sbjct: 56 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVH 112
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYF 475
+V +G++YL ++RDL N+LL + ++DF LS +Y A +G +
Sbjct: 113 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN-YYKAQTHGKWP 171
Query: 476 IMYKW 480
+ KW
Sbjct: 172 V--KW 174
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 4/150 (2%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL--LDH 365
+ +K LG G G+VH GE + K + + + ++++ LDH
Sbjct: 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 74
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH 425
+ L S+ + L+T + P G L + +Q + ++ G+ YL
Sbjct: 75 AHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLE 132
Query: 426 CLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+++R+L N+LL+ V + DF ++
Sbjct: 133 EHGMVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 4/150 (2%)
Query: 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL--LDH 365
+ +K LG G G+VH GE + K + + + ++++ LDH
Sbjct: 33 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 92
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH 425
+ L S+ + L+T + P G L + +Q + ++ G+ YL
Sbjct: 93 AHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLE 150
Query: 426 CLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+++R+L N+LL+ V + DF ++
Sbjct: 151 EHGMVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHR-----ACIEREIMSLL-DH 365
K LG G G V G G+ A+ ++ +V + ++ H E +IMS L H
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAV--LKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQ--------------PMKIFREDSAR 411
+ L + + +IT++C G+L L ++ P +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 412 FYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTDFDLS 455
++++V G+ +L I+RD+ N+LL +GHV + DF L+
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLA 213
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E +M LD+P++ + + + + L+ + G L L Q + ++ +
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVH 118
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYF 475
+V +G++YL ++RDL N+LL + ++DF LS + +Y A +G +
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWP 177
Query: 476 IMYKW 480
+ KW
Sbjct: 178 V--KW 180
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E +M LD+P++ + + + + L+ + G L L Q + ++ +
Sbjct: 58 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVH 114
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVFYHAHVNGFYF 475
+V +G++YL ++RDL N+LL + ++DF LS +Y A +G +
Sbjct: 115 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN-YYKAQTHGKWP 173
Query: 476 IMYKW 480
+ KW
Sbjct: 174 V--KW 176
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 61/150 (40%), Gaps = 21/150 (14%)
Query: 356 EREIMSL--LDHPFLPTLYASFQTSTHI----CLITDFCPGGELFALLDKQPMKIFREDS 409
EREI S + H L A+ + +++ LIT F G +L D I +
Sbjct: 57 EREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKG---SLTDYLKGNIITWNE 113
Query: 410 ARFYAAEVVIGLEYLH-----CLG------IIYRDLKPENILLQKDGHVVLTDFDLSF-M 457
A + GL YLH C G I +RD K +N+LL+ D VL DF L+
Sbjct: 114 LCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRF 173
Query: 458 TSCKPQVFYHAHVNGFYFIMYKWLTGYFTY 487
KP H V ++ + L G +
Sbjct: 174 EPGKPPGDTHGQVGTRRYMAPEVLEGAINF 203
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAA 415
E +M LD+P++ + + + + L+ + G L L Q + ++ +
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVH 118
Query: 416 EVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+V +G++YL ++RDL N+LL + ++DF LS
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 158
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 20/164 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSV-MLNRNKVHR----ACIEREIMSLL-DH 365
KPLG G G V L E G + + + +V ML + + E E+M ++ H
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQ--------------PMKIFREDSAR 411
+ L + + +I ++ G L L + P +
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 412 FYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
A +V G+EYL I+RDL N+L+ +D + + DF L+
Sbjct: 143 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 186
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 18/171 (10%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAME-KSVMLNRNKVHRACIEREIMSLLDHP------ 366
+G G G V + E A+K ++ K LN+ A IE ++ L++
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQ-----AQIEVRLLELMNKHDTEMKY 116
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
++ L F H+CL+ + L+ LL + + R +A ++ L +L
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 175
Query: 427 --LGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK-PQVFYHAHVNGFY 474
L II+ DLKPENILL + D F +SC+ Q Y + FY
Sbjct: 176 PELSIIHCDLKPENILLCNPKRXAIKIVD--FGSSCQLGQRIYQXIQSRFY 224
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+ +V G+E+L I+RDL NILL ++ V + DF L+
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLA 246
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 412 FYAAEVVIGLEYLHCLGIIYRDLKPENILLQ-KDGHVVLTDF 452
Y ++ + ++H LGI +RD+KP+N+L+ KD + L DF
Sbjct: 145 IYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDF 186
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 20/164 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSV-MLNRNKVHR----ACIEREIMSLL-DH 365
KPLG G G V L E G + + + +V ML + + E E+M ++ H
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQ--------------PMKIFREDSAR 411
+ L + + +I ++ G L L + P +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 412 FYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
A +V G+EYL I+RDL N+L+ +D + + DF L+
Sbjct: 147 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 190
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 20/164 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSV-MLNRNKVHR----ACIEREIMSLL-DH 365
KPLG G G V L E G + + + +V ML + + E E+M ++ H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQ--------------PMKIFREDSAR 411
+ L + + +I ++ G L L + P +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 412 FYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
A +V G+EYL I+RDL N+L+ +D + + DF L+
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 20/164 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSV-MLNRNKVHR----ACIEREIMSLL-DH 365
KPLG G G V L E G + + + +V ML + + E E+M ++ H
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQ--------------PMKIFREDSAR 411
+ L + + +I ++ G L L + P +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 412 FYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
A +V G+EYL I+RDL N+L+ +D + + DF L+
Sbjct: 146 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 189
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 20/164 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSV-MLNRNKVHR----ACIEREIMSLL-DH 365
KPLG G G V L E G + + + +V ML + + E E+M ++ H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQ--------------PMKIFREDSAR 411
+ L + + +I ++ G L L + P +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 412 FYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
A +V G+EYL I+RDL N+L+ +D + + DF L+
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 20/164 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSV-MLNRNKVHR----ACIEREIMSLL-DH 365
KPLG G G V L E G + + + +V ML + + E E+M ++ H
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQ--------------PMKIFREDSAR 411
+ L + + +I ++ G L L + P +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 412 FYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
A +V G+EYL I+RDL N+L+ +D + + DF L+
Sbjct: 139 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 182
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 18/171 (10%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAME-KSVMLNRNKVHRACIEREIMSLLDHP------ 366
+G G G V + E A+K ++ K LN+ A IE ++ L++
Sbjct: 43 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQ-----AQIEVRLLELMNKHDTEMKY 97
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
++ L F H+CL+ + L+ LL + + R +A ++ L +L
Sbjct: 98 YIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 156
Query: 427 --LGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK-PQVFYHAHVNGFY 474
L II+ DLKPENILL + D F +SC+ Q Y + FY
Sbjct: 157 PELSIIHCDLKPENILLCNPKRSAIKIVD--FGSSCQLGQRIYQXIQSRFY 205
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 20/164 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSV-MLNRNKVHR----ACIEREIMSLL-DH 365
KPLG G G V L E G + + + +V ML + + E E+M ++ H
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQ--------------PMKIFREDSAR 411
+ L + + +I ++ G L L + P +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 412 FYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
A +V G+EYL I+RDL N+L+ +D + + DF L+
Sbjct: 195 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 238
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 12/144 (8%)
Query: 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKS-----VMLNRNKVHRACIEREIMSLLDH 365
I+ LG G +V L AMK ++ + L+ K+ + C+ S +
Sbjct: 36 IRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLK-CVRESDPSDPNK 94
Query: 366 PFLPTLYASFQTS----THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGL 421
+ L F+ S H+C++ + G L + K + + +V+ GL
Sbjct: 95 DMVVQLIDDFKISGMNGIHVCMVFEVL-GHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGL 153
Query: 422 EYLHC-LGIIYRDLKPENILLQKD 444
+YLH II+ D+KPENIL+ D
Sbjct: 154 DYLHSKCKIIHTDIKPENILMCVD 177
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 18/171 (10%)
Query: 314 LGCGDTGSVHLVELQGAGELYAMKAME-KSVMLNRNKVHRACIEREIMSLLDHP------ 366
+G G G V + E A+K ++ K LN+ A IE ++ L++
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQ-----AQIEVRLLELMNKHDTEMKY 116
Query: 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC 426
++ L F H+CL+ + L+ LL + + R +A ++ L +L
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 175
Query: 427 --LGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK-PQVFYHAHVNGFY 474
L II+ DLKPENILL + D F +SC+ Q Y + FY
Sbjct: 176 PELSIIHCDLKPENILLCNPKRSAIKIVD--FGSSCQLGQRIYQXIQSRFY 224
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 20/164 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSV-MLNRNKVHR----ACIEREIMSLL-DH 365
KPLG G G V L E G + + + +V ML + + E E+M ++ H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQ--------------PMKIFREDSAR 411
+ L + + +I ++ G L L + P +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 412 FYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
A +V G+EYL I+RDL N+L+ +D + + DF L+
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 8/165 (4%)
Query: 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS 361
++ +F LG G G V+ L G L A+K +++ + + E E++S
Sbjct: 26 QVASDNFXNKNILGRGGFGKVYKGRL-ADGXLVAVKRLKEE--RTQGGELQFQTEVEMIS 82
Query: 362 LLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFRED--SARFYAAEVVI 419
+ H L L T T L+ + G + + L ++P D + A
Sbjct: 83 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSAR 142
Query: 420 GLEYLH--C-LGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK 461
GL YLH C II+RD+K NILL ++ V+ DF L+ + K
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 31/172 (18%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHR-----ACIEREIMSLL-DH 365
K LG G G V G G+ A+ ++ +V + ++ H E +IMS L H
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAV--LKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQ--------------PMKIFREDSAR 411
+ L + + +IT++C G+L L ++ P + +ED
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 412 F-------YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV-LTDFDLS 455
++++V G+ +L I+RD+ N+LL +GHV + DF L+
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLA 205
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFRED--SARFY 413
E E++S+ H L L T T L+ + G + + L ++P D +
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 414 AAEVVIGLEYLH--C-LGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK 461
A GL YLH C II+RD+K NILL ++ V+ DF L+ + K
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 195
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 20/164 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSV-MLNRNKVHR----ACIEREIMSLL-DH 365
KPLG G G V L E G + + + +V ML + + E E+M ++ H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLDKQ--------------PMKIFREDSAR 411
+ L + + +I ++ G L L + P +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 412 FYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
A +V G+EYL I+RDL N+L+ +D + + DF L+
Sbjct: 154 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 22/122 (18%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALL------------------ 397
E ++ ++HP + LY + + LI ++ G L L
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 398 ----DKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFD 453
D + +A ++ G++YL + +++RDL NIL+ + + ++DF
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFG 195
Query: 454 LS 455
LS
Sbjct: 196 LS 197
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 68/164 (41%), Gaps = 20/164 (12%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACI-----EREIMSLL-DH 365
KPLG G G V + E G + +A+ +V + ++ + E E+M ++ H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 366 PFLPTLYASFQTSTHICLITDFCPGGELFALLD--KQPMKIFREDSARFYAAEVVI---- 419
+ TL + + +I ++ G L L + P + D R ++
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 420 --------GLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
G+EYL I+RDL N+L+ ++ + + DF L+
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
+P +Y Q H L+ D G L LLD K F + A +++ ++ +H
Sbjct: 67 IPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRK-FSVKTVAMAAKQMLARVQSIHEK 124
Query: 428 GIIYRDLKPENILLQK 443
++YRD+KP+N L+ +
Sbjct: 125 SLVYRDIKPDNFLIGR 140
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL 427
+P +Y Q H L+ D G L LLD K F + A +++ ++ +H
Sbjct: 68 IPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRK-FSVKTVAMAAKQMLARVQSIHEK 125
Query: 428 GIIYRDLKPENILLQK 443
++YRD+KP+N L+ +
Sbjct: 126 SLVYRDIKPDNFLIGR 141
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF-LPT 370
+ +G G G ++L +GE A+K + V ++H IE + ++ +P+
Sbjct: 15 RKIGSGSFGDIYLGANIASGEEVAIKL--ECVKTKHPQLH---IESKFYKMMQGGVGIPS 69
Query: 371 L-YASFQTSTHICLITDFCPGGE-LFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG 428
+ + + ++ ++ P E LF ++ F + A +++ +EY+H
Sbjct: 70 IKWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMISRIEYIHSKN 125
Query: 429 IIYRDLKPENIL--LQKDGHVV-LTDFDLS 455
I+RD+KP+N L L K G++V + DF L+
Sbjct: 126 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 22/122 (18%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALL------------------ 397
E ++ ++HP + LY + + LI ++ G L L
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 398 ----DKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFD 453
D + +A ++ G++YL + +++RDL NIL+ + + ++DF
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 454 LS 455
LS
Sbjct: 196 LS 197
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 22/122 (18%)
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALL------------------ 397
E ++ ++HP + LY + + LI ++ G L L
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 398 ----DKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFD 453
D + +A ++ G++YL + +++RDL NIL+ + + ++DF
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 454 LS 455
LS
Sbjct: 196 LS 197
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 66/171 (38%), Gaps = 19/171 (11%)
Query: 301 EKIGLHHFKPIKPLGCGDTGSVHLVELQGAGE-----LYAMKAMEKSVMLNRNKVHRACI 355
+ I H+ + LG G G V L E L A+K ++ + R HR
Sbjct: 8 QHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHR--- 64
Query: 356 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALL-----------DKQPMKI 404
E E+++ L H + Y + ++ ++ G+L L + P
Sbjct: 65 EAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE 124
Query: 405 FREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
+ A ++ G+ YL ++RDL N L+ ++ V + DF +S
Sbjct: 125 LTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+ +V G+E+L I+RDL NILL + V + DF L+
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 238
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+ +V G+E+L I+RDL NILL + V + DF L+
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 240
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 405 FREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD-GHVVLTDF 452
+E+ AR + +V+ + + H G+++RD+K ENIL+ + G + L DF
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 66/168 (39%), Gaps = 28/168 (16%)
Query: 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE-IMSLL------- 363
K LG G G V VE G + + AM +V + + H ERE +MS L
Sbjct: 45 KTLGAGAFGKV--VEATAYGLIKSDAAMTVAVKMLKPSAHLT--EREALMSELKVLSYLG 100
Query: 364 DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSA------------- 410
+H + L + +IT++C G+L L ++ ++
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 411 ---RFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
++ +V G+ +L I+RDL NILL + DF L+
Sbjct: 161 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA 208
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+ +V G+E+L I+RDL NILL + V + DF L+
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 245
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 413 YAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455
Y+ +V G+E+L I+RDL NILL + V + DF L+
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 247
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,171,337
Number of Sequences: 62578
Number of extensions: 649150
Number of successful extensions: 3241
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 1608
Number of HSP's gapped (non-prelim): 1237
length of query: 489
length of database: 14,973,337
effective HSP length: 103
effective length of query: 386
effective length of database: 8,527,803
effective search space: 3291731958
effective search space used: 3291731958
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)