Query 042772
Match_columns 489
No_of_seqs 426 out of 3095
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 09:18:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042772.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042772hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0598 Ribosomal protein S6 k 100.0 7.8E-37 1.7E-41 304.6 15.1 184 303-488 22-226 (357)
2 KOG0595 Serine/threonine-prote 100.0 1.2E-35 2.7E-40 298.7 19.5 181 305-488 9-215 (429)
3 KOG0610 Putative serine/threon 100.0 1.6E-35 3.4E-40 298.2 18.5 178 279-456 49-227 (459)
4 KOG0616 cAMP-dependent protein 100.0 8.7E-36 1.9E-40 289.1 15.6 184 303-488 41-242 (355)
5 KOG0605 NDR and related serine 100.0 3.1E-35 6.8E-40 304.1 17.2 155 300-456 135-289 (550)
6 KOG0575 Polo-like serine/threo 100.0 2.4E-34 5.2E-39 301.5 17.7 181 306-488 18-219 (592)
7 KOG0615 Serine/threonine prote 100.0 1.6E-34 3.6E-39 290.5 13.8 182 305-488 171-382 (475)
8 KOG0592 3-phosphoinositide-dep 100.0 2.6E-34 5.6E-39 297.2 14.8 185 302-488 69-288 (604)
9 KOG0581 Mitogen-activated prot 100.0 8.2E-34 1.8E-38 283.2 17.6 184 302-489 75-279 (364)
10 KOG0600 Cdc2-related protein k 100.0 4.6E-33 1E-37 285.9 14.5 183 304-489 115-299 (560)
11 KOG0593 Predicted protein kina 100.0 2.5E-33 5.5E-38 272.5 11.0 180 306-488 2-203 (396)
12 KOG0694 Serine/threonine prote 100.0 7.7E-33 1.7E-37 293.2 15.1 185 301-488 363-569 (694)
13 KOG0583 Serine/threonine prote 100.0 6.3E-32 1.4E-36 280.1 18.7 184 303-488 14-224 (370)
14 KOG0611 Predicted serine/threo 100.0 1.4E-32 3.1E-37 275.2 12.4 182 305-488 52-254 (668)
15 KOG0591 NIMA (never in mitosis 100.0 1.5E-33 3.3E-38 271.8 3.2 156 303-459 16-179 (375)
16 cd05628 STKc_NDR1 Catalytic do 100.0 4.4E-31 9.5E-36 272.8 19.4 181 306-488 1-237 (363)
17 KOG0192 Tyrosine kinase specif 100.0 5.7E-31 1.2E-35 271.4 18.6 184 302-488 37-247 (362)
18 KOG0580 Serine/threonine prote 100.0 3.8E-32 8.3E-37 257.1 8.4 187 302-488 18-223 (281)
19 KOG0597 Serine-threonine prote 100.0 1.3E-31 2.9E-36 277.4 13.0 179 306-488 2-201 (808)
20 KOG0588 Serine/threonine prote 100.0 2.8E-31 6E-36 279.7 14.3 181 306-488 12-213 (786)
21 cd05629 STKc_NDR_like_fungal C 100.0 1.3E-30 2.7E-35 270.5 18.8 148 307-456 2-149 (377)
22 cd05599 STKc_NDR_like Catalyti 100.0 1.2E-30 2.7E-35 268.8 18.5 181 306-488 1-240 (364)
23 PTZ00263 protein kinase A cata 100.0 2.1E-30 4.5E-35 264.2 19.4 184 303-488 15-216 (329)
24 cd05626 STKc_LATS2 Catalytic d 100.0 2.2E-30 4.7E-35 269.5 19.7 148 307-456 2-149 (381)
25 cd05625 STKc_LATS1 Catalytic d 100.0 2.4E-30 5.3E-35 268.9 19.7 148 307-456 2-149 (382)
26 KOG0659 Cdk activating kinase 100.0 7E-31 1.5E-35 251.7 13.8 178 306-487 2-179 (318)
27 cd05598 STKc_LATS Catalytic do 100.0 1.8E-30 3.9E-35 269.1 17.2 148 307-456 2-149 (376)
28 KOG0585 Ca2+/calmodulin-depend 100.0 1.4E-30 3.1E-35 265.8 15.3 186 300-488 91-320 (576)
29 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.8E-30 1.1E-34 261.4 19.3 181 306-488 1-199 (333)
30 cd05612 STKc_PRKX_like Catalyt 100.0 2.8E-30 6E-35 258.4 16.8 181 306-488 1-199 (291)
31 cd05621 STKc_ROCK2 Catalytic d 100.0 4.1E-30 8.8E-35 267.0 18.6 183 303-488 40-248 (370)
32 PTZ00426 cAMP-dependent protei 100.0 5.5E-30 1.2E-34 263.0 19.2 185 302-488 26-229 (340)
33 cd05631 STKc_GRK4 Catalytic do 100.0 7.7E-30 1.7E-34 254.2 19.5 181 308-488 2-202 (285)
34 cd05571 STKc_PKB Catalytic dom 100.0 7.9E-30 1.7E-34 259.2 19.1 175 312-488 1-196 (323)
35 KOG0612 Rho-associated, coiled 100.0 2.1E-31 4.6E-36 293.4 8.0 185 302-488 71-282 (1317)
36 cd05627 STKc_NDR2 Catalytic do 100.0 4.4E-30 9.5E-35 264.9 17.1 181 306-488 1-237 (360)
37 cd05622 STKc_ROCK1 Catalytic d 100.0 9E-30 2E-34 264.4 19.4 184 302-488 39-248 (371)
38 KOG0197 Tyrosine kinases [Sign 100.0 2.7E-30 5.8E-35 268.2 15.0 185 299-488 199-406 (468)
39 cd05596 STKc_ROCK Catalytic do 100.0 8.6E-30 1.9E-34 264.3 18.7 184 302-488 39-248 (370)
40 KOG0198 MEKK and related serin 100.0 2.4E-30 5.1E-35 260.5 13.7 179 306-488 17-223 (313)
41 KOG0663 Protein kinase PITSLRE 100.0 1.7E-30 3.6E-35 255.7 11.7 180 304-487 74-255 (419)
42 KOG0690 Serine/threonine prote 100.0 1.8E-30 3.8E-35 254.4 11.1 185 302-488 164-369 (516)
43 cd05597 STKc_DMPK_like Catalyt 100.0 2.1E-29 4.5E-34 257.1 19.4 182 306-488 1-209 (331)
44 KOG0661 MAPK related serine/th 100.0 7.5E-31 1.6E-35 268.0 8.7 155 304-462 8-164 (538)
45 cd05573 STKc_ROCK_NDR_like Cat 100.0 8.6E-30 1.9E-34 260.5 16.4 181 306-488 1-231 (350)
46 KOG0582 Ste20-like serine/thre 100.0 1.7E-29 3.7E-34 256.5 18.2 188 299-488 19-233 (516)
47 KOG0193 Serine/threonine prote 100.0 3.8E-30 8.2E-35 269.2 13.3 186 297-488 383-594 (678)
48 cd05593 STKc_PKB_gamma Catalyt 100.0 3.1E-29 6.7E-34 255.7 19.8 175 312-488 1-196 (328)
49 cd05595 STKc_PKB_beta Catalyti 100.0 2.5E-29 5.4E-34 255.7 18.8 175 312-488 1-196 (323)
50 cd05585 STKc_YPK1_like Catalyt 100.0 3.6E-29 7.8E-34 252.9 19.7 173 314-488 1-194 (312)
51 cd05624 STKc_MRCK_beta Catalyt 100.0 2.5E-29 5.4E-34 256.5 18.6 182 306-488 1-209 (331)
52 KOG0594 Protein kinase PCTAIRE 100.0 1.4E-29 2.9E-34 252.3 15.3 153 305-459 10-171 (323)
53 cd05601 STKc_CRIK Catalytic do 100.0 2.2E-29 4.8E-34 256.1 16.4 182 306-488 1-210 (330)
54 cd05587 STKc_cPKC Catalytic do 100.0 6.6E-29 1.4E-33 252.3 19.6 180 307-488 1-202 (324)
55 cd05623 STKc_MRCK_alpha Cataly 100.0 4E-29 8.6E-34 255.0 17.8 182 306-488 1-209 (332)
56 cd05605 STKc_GRK4_like Catalyt 100.0 9.1E-29 2E-33 246.4 19.4 182 307-488 1-202 (285)
57 cd05594 STKc_PKB_alpha Catalyt 100.0 5.4E-29 1.2E-33 253.0 18.0 175 312-488 1-197 (325)
58 cd05588 STKc_aPKC Catalytic do 100.0 9.8E-29 2.1E-33 251.9 19.6 175 312-488 1-197 (329)
59 cd05616 STKc_cPKC_beta Catalyt 100.0 9.6E-29 2.1E-33 251.0 19.4 180 307-488 1-202 (323)
60 cd05591 STKc_nPKC_epsilon Cata 100.0 1.1E-28 2.4E-33 250.3 19.4 175 312-488 1-197 (321)
61 cd05589 STKc_PKN Catalytic dom 100.0 8.5E-29 1.8E-33 251.5 18.4 178 308-488 1-202 (324)
62 cd05592 STKc_nPKC_theta_delta 100.0 1.2E-28 2.6E-33 249.9 19.2 175 312-488 1-197 (316)
63 cd05618 STKc_aPKC_iota Catalyt 100.0 1.5E-28 3.3E-33 250.7 19.9 175 312-488 1-197 (329)
64 PLN00034 mitogen-activated pro 100.0 1E-28 2.2E-33 254.1 18.7 179 302-488 70-274 (353)
65 cd07869 STKc_PFTAIRE1 Catalyti 100.0 9.8E-29 2.1E-33 248.1 17.8 179 306-488 5-205 (303)
66 cd05615 STKc_cPKC_alpha Cataly 100.0 1.4E-28 3E-33 250.2 18.9 180 307-488 1-202 (323)
67 cd07871 STKc_PCTAIRE3 Catalyti 100.0 9.3E-29 2E-33 246.8 17.2 180 305-488 4-205 (288)
68 cd05590 STKc_nPKC_eta Catalyti 100.0 1.5E-28 3.3E-33 249.5 18.9 175 312-488 1-197 (320)
69 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.1E-28 2.3E-33 251.6 17.8 185 302-488 3-278 (338)
70 KOG0032 Ca2+/calmodulin-depend 100.0 1.4E-28 3E-33 255.6 18.6 181 305-488 34-239 (382)
71 cd05575 STKc_SGK Catalytic dom 100.0 2.2E-28 4.7E-33 248.4 18.9 175 312-488 1-197 (323)
72 cd05603 STKc_SGK2 Catalytic do 100.0 2.1E-28 4.6E-33 248.1 18.7 175 312-488 1-197 (321)
73 cd05608 STKc_GRK1 Catalytic do 100.0 3E-28 6.5E-33 242.1 19.4 175 314-488 1-198 (280)
74 cd05617 STKc_aPKC_zeta Catalyt 100.0 3.1E-28 6.8E-33 248.0 19.5 175 312-488 1-197 (327)
75 cd05607 STKc_GRK7 Catalytic do 100.0 4.1E-28 9E-33 240.7 19.6 175 314-488 1-195 (277)
76 cd05604 STKc_SGK3 Catalytic do 100.0 2.4E-28 5.3E-33 248.3 18.3 175 312-488 1-197 (325)
77 cd05614 STKc_MSK2_N N-terminal 100.0 3.1E-28 6.6E-33 247.9 19.0 180 307-488 1-208 (332)
78 cd05620 STKc_nPKC_delta Cataly 100.0 3.1E-28 6.8E-33 246.9 18.8 175 312-488 1-197 (316)
79 cd05630 STKc_GRK6 Catalytic do 100.0 5.4E-28 1.2E-32 241.1 19.8 181 308-488 2-202 (285)
80 cd05602 STKc_SGK1 Catalytic do 100.0 4.2E-28 9.2E-33 246.5 19.1 175 312-488 1-197 (325)
81 cd05584 STKc_p70S6K Catalytic 100.0 4.3E-28 9.4E-33 246.4 19.1 176 311-488 1-201 (323)
82 cd06649 PKc_MEK2 Catalytic dom 100.0 7.9E-28 1.7E-32 245.3 21.1 181 304-488 3-203 (331)
83 KOG0608 Warts/lats-like serine 100.0 5.6E-29 1.2E-33 260.2 12.7 153 302-456 625-777 (1034)
84 cd05632 STKc_GRK5 Catalytic do 100.0 6.5E-28 1.4E-32 240.3 19.8 181 308-488 2-202 (285)
85 cd05619 STKc_nPKC_theta Cataly 100.0 5E-28 1.1E-32 245.5 19.1 175 312-488 1-197 (316)
86 cd06650 PKc_MEK1 Catalytic dom 100.0 8.7E-28 1.9E-32 245.5 20.6 181 304-488 3-203 (333)
87 KOG1187 Serine/threonine prote 100.0 5.3E-28 1.1E-32 250.2 18.5 180 305-488 74-279 (361)
88 cd07848 STKc_CDKL5 Catalytic d 100.0 4.9E-28 1.1E-32 240.2 17.6 179 307-488 2-202 (287)
89 KOG0660 Mitogen-activated prot 100.0 1.6E-28 3.4E-33 244.5 13.9 179 306-488 22-229 (359)
90 cd05570 STKc_PKC Catalytic dom 100.0 7.2E-28 1.6E-32 244.2 18.8 175 312-488 1-197 (318)
91 KOG0194 Protein tyrosine kinas 100.0 1.8E-28 3.9E-33 257.6 14.2 188 300-488 151-364 (474)
92 KOG0589 Serine/threonine prote 100.0 4E-29 8.6E-34 258.4 9.0 183 305-488 3-198 (426)
93 cd05582 STKc_RSK_N N-terminal 100.0 4.5E-28 9.7E-33 245.4 16.5 175 311-488 1-199 (318)
94 KOG0667 Dual-specificity tyros 100.0 4.2E-28 9.1E-33 256.9 16.2 177 307-488 187-389 (586)
95 cd07859 STKc_TDY_MAPK_plant Ca 100.0 7.6E-28 1.6E-32 244.4 17.2 178 307-488 1-209 (338)
96 cd05586 STKc_Sck1_like Catalyt 100.0 4.8E-28 1E-32 246.4 15.8 173 314-488 1-198 (330)
97 KOG0578 p21-activated serine/t 100.0 3.1E-28 6.8E-33 253.8 13.3 178 305-488 272-470 (550)
98 KOG4717 Serine/threonine prote 100.0 4.3E-28 9.3E-33 248.9 13.8 180 307-488 19-220 (864)
99 cd05096 PTKc_DDR1 Catalytic do 100.0 3.7E-27 8.1E-32 236.6 19.5 182 305-488 4-243 (304)
100 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.9E-27 6.4E-32 232.8 18.1 183 303-488 2-210 (266)
101 cd05580 STKc_PKA Catalytic dom 100.0 5.4E-27 1.2E-31 233.8 20.0 180 307-488 2-199 (290)
102 PHA03212 serine/threonine kina 99.9 3.1E-27 6.6E-32 247.4 18.8 173 303-487 89-283 (391)
103 KOG4250 TANK binding protein k 99.9 6.3E-28 1.4E-32 256.6 13.7 182 306-489 13-226 (732)
104 cd07862 STKc_CDK6 Catalytic do 99.9 4.6E-27 1E-31 233.6 18.8 181 306-488 1-210 (290)
105 cd05574 STKc_phototropin_like 99.9 5.6E-27 1.2E-31 236.3 19.6 182 307-488 2-233 (316)
106 cd07872 STKc_PCTAIRE2 Catalyti 99.9 3.7E-27 7.9E-32 237.4 18.1 180 305-488 5-206 (309)
107 cd05106 PTKc_CSF-1R Catalytic 99.9 2.8E-27 6.2E-32 245.9 17.7 184 303-488 35-316 (374)
108 KOG0658 Glycogen synthase kina 99.9 4.8E-28 1E-32 241.5 11.1 174 307-488 25-227 (364)
109 cd07853 STKc_NLK Catalytic dom 99.9 3.2E-27 6.9E-32 244.6 17.7 178 307-488 1-206 (372)
110 cd08219 STKc_Nek3 Catalytic do 99.9 7.8E-27 1.7E-31 227.4 19.3 180 307-488 1-201 (255)
111 cd07876 STKc_JNK2 Catalytic do 99.9 5E-27 1.1E-31 241.9 18.5 178 305-488 20-223 (359)
112 KOG0599 Phosphorylase kinase g 99.9 4.9E-28 1.1E-32 232.7 10.1 182 304-487 15-228 (411)
113 PTZ00267 NIMA-related protein 99.9 6E-27 1.3E-31 251.3 19.7 180 306-488 67-272 (478)
114 cd08529 STKc_FA2-like Catalyti 99.9 1.4E-26 2.9E-31 225.0 20.3 181 307-488 1-202 (256)
115 cd08228 STKc_Nek6 Catalytic do 99.9 8.9E-27 1.9E-31 228.3 19.1 183 306-488 2-207 (267)
116 cd05104 PTKc_Kit Catalytic dom 99.9 5.7E-27 1.2E-31 243.7 18.4 184 303-488 32-318 (375)
117 KOG0586 Serine/threonine prote 99.9 1.8E-27 3.9E-32 250.1 14.7 183 303-488 53-256 (596)
118 cd06615 PKc_MEK Catalytic doma 99.9 1.6E-26 3.4E-31 233.1 21.0 178 307-488 2-199 (308)
119 cd08221 STKc_Nek9 Catalytic do 99.9 1.6E-26 3.6E-31 225.0 20.3 181 307-488 1-202 (256)
120 PRK13184 pknD serine/threonine 99.9 8E-27 1.7E-31 262.0 20.5 183 306-488 2-232 (932)
121 cd08229 STKc_Nek7 Catalytic do 99.9 8.1E-27 1.8E-31 228.6 18.1 183 306-488 2-207 (267)
122 cd05578 STKc_Yank1 Catalytic d 99.9 5.9E-27 1.3E-31 228.7 17.0 180 307-488 1-200 (258)
123 KOG1989 ARK protein kinase fam 99.9 2.2E-27 4.7E-32 258.3 15.2 157 297-456 28-194 (738)
124 cd06646 STKc_MAP4K5 Catalytic 99.9 1.3E-26 2.8E-31 227.4 19.4 179 305-488 8-210 (267)
125 cd05108 PTKc_EGFR Catalytic do 99.9 8.4E-27 1.8E-31 235.7 18.5 181 304-488 5-213 (316)
126 cd05609 STKc_MAST Catalytic do 99.9 1.3E-26 2.8E-31 232.9 19.7 180 307-488 2-217 (305)
127 cd05088 PTKc_Tie2 Catalytic do 99.9 1.1E-26 2.4E-31 233.6 19.2 184 303-488 4-225 (303)
128 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 1.9E-26 4.1E-31 225.4 19.9 183 306-488 2-207 (267)
129 PHA02988 hypothetical protein; 99.9 1.2E-26 2.6E-31 231.6 18.8 173 312-488 26-223 (283)
130 cd05052 PTKc_Abl Catalytic dom 99.9 1.5E-26 3.3E-31 226.9 18.7 182 303-488 3-207 (263)
131 cd06625 STKc_MEKK3_like Cataly 99.9 2.1E-26 4.6E-31 224.8 19.6 181 306-488 2-208 (263)
132 cd05072 PTKc_Lyn Catalytic dom 99.9 1.3E-26 2.9E-31 226.5 18.1 182 302-488 2-206 (261)
133 KOG0986 G protein-coupled rece 99.9 6.7E-28 1.4E-32 245.0 9.0 186 302-487 181-386 (591)
134 cd07873 STKc_PCTAIRE1 Catalyti 99.9 1.1E-26 2.5E-31 232.7 17.9 180 305-488 5-206 (301)
135 cd05084 PTKc_Fes Catalytic dom 99.9 1.8E-26 4E-31 224.4 18.9 174 312-488 1-198 (252)
136 PTZ00283 serine/threonine prot 99.9 1.2E-26 2.5E-31 250.1 19.1 184 304-488 30-246 (496)
137 cd07878 STKc_p38beta_MAPK11 Ca 99.9 8.3E-27 1.8E-31 238.4 17.0 178 306-488 15-217 (343)
138 cd05033 PTKc_EphR Catalytic do 99.9 1.9E-26 4.1E-31 226.4 18.9 181 305-488 3-210 (266)
139 cd07863 STKc_CDK4 Catalytic do 99.9 1.2E-26 2.6E-31 230.1 17.6 180 307-488 1-208 (288)
140 cd06619 PKc_MKK5 Catalytic dom 99.9 2.7E-26 5.9E-31 227.5 20.0 174 307-488 2-194 (279)
141 PF00069 Pkinase: Protein kina 99.9 6.7E-27 1.4E-31 227.4 15.2 178 308-488 1-200 (260)
142 cd05090 PTKc_Ror1 Catalytic do 99.9 1.8E-26 3.8E-31 228.9 18.3 183 304-488 3-228 (283)
143 cd05148 PTKc_Srm_Brk Catalytic 99.9 1.3E-26 2.9E-31 226.3 17.1 180 305-488 5-206 (261)
144 cd05048 PTKc_Ror Catalytic Dom 99.9 2.2E-26 4.9E-31 227.6 18.9 183 304-488 3-228 (283)
145 cd06645 STKc_MAP4K3 Catalytic 99.9 1.8E-26 4E-31 226.3 18.1 179 305-488 8-210 (267)
146 cd06644 STKc_STK10_LOK Catalyt 99.9 3.2E-26 6.8E-31 228.3 20.0 179 306-488 12-216 (292)
147 cd07874 STKc_JNK3 Catalytic do 99.9 1.3E-26 2.9E-31 238.1 17.5 179 304-488 15-219 (355)
148 cd08227 PK_STRAD_alpha Pseudok 99.9 2.8E-26 6.1E-31 233.1 19.5 178 310-488 2-211 (327)
149 cd05066 PTKc_EphR_A Catalytic 99.9 3.1E-26 6.7E-31 225.2 18.8 181 305-488 3-211 (267)
150 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 2.2E-26 4.7E-31 228.3 17.9 180 307-488 2-208 (286)
151 cd07844 STKc_PCTAIRE_like Cata 99.9 1.9E-26 4E-31 229.4 17.4 180 305-488 4-205 (291)
152 cd05577 STKc_GRK Catalytic dom 99.9 3.1E-26 6.7E-31 226.6 18.8 175 314-488 1-195 (277)
153 cd06611 STKc_SLK_like Catalyti 99.9 3E-26 6.4E-31 226.7 18.7 179 306-488 5-209 (280)
154 PTZ00036 glycogen synthase kin 99.9 1.6E-26 3.5E-31 245.5 17.7 176 305-488 65-272 (440)
155 cd05114 PTKc_Tec_Rlk Catalytic 99.9 3.2E-26 7E-31 223.4 18.5 178 305-488 3-203 (256)
156 cd05105 PTKc_PDGFR_alpha Catal 99.9 3.1E-26 6.6E-31 240.6 19.6 186 301-488 32-341 (400)
157 cd07875 STKc_JNK1 Catalytic do 99.9 2.4E-26 5.1E-31 237.3 18.3 179 304-488 22-226 (364)
158 cd07861 STKc_CDK1_euk Catalyti 99.9 2.3E-26 5.1E-31 227.4 17.5 180 307-488 1-203 (285)
159 KOG4236 Serine/threonine prote 99.9 2.8E-27 6.1E-32 243.4 11.1 149 310-460 568-719 (888)
160 cd06652 STKc_MEKK2 Catalytic d 99.9 4.3E-26 9.4E-31 223.7 19.1 181 306-488 2-210 (265)
161 cd06637 STKc_TNIK Catalytic do 99.9 2.5E-26 5.5E-31 225.7 17.3 179 306-488 6-217 (272)
162 cd06643 STKc_SLK Catalytic dom 99.9 6.2E-26 1.4E-30 224.8 19.9 177 308-488 7-209 (282)
163 cd06613 STKc_MAP4K3_like Catal 99.9 7.4E-26 1.6E-30 220.6 20.0 179 306-488 3-205 (262)
164 cd05065 PTKc_EphR_B Catalytic 99.9 5E-26 1.1E-30 223.8 18.9 181 305-488 3-213 (269)
165 cd05054 PTKc_VEGFR Catalytic d 99.9 3.2E-26 7E-31 234.6 17.8 184 303-488 4-277 (337)
166 cd05068 PTKc_Frk_like Catalyti 99.9 4.7E-26 1E-30 223.0 18.2 181 303-488 3-206 (261)
167 cd07847 STKc_CDKL1_4 Catalytic 99.9 5.9E-26 1.3E-30 224.4 19.1 180 306-488 1-202 (286)
168 cd05034 PTKc_Src_like Catalyti 99.9 5.5E-26 1.2E-30 222.0 18.4 182 302-488 2-206 (261)
169 cd05059 PTKc_Tec_like Catalyti 99.9 3.8E-26 8.1E-31 223.2 17.1 178 305-488 3-203 (256)
170 cd05042 PTKc_Aatyk Catalytic d 99.9 4.2E-26 9.1E-31 224.3 17.5 175 312-488 1-211 (269)
171 KOG0033 Ca2+/calmodulin-depend 99.9 3E-28 6.4E-33 231.2 2.1 181 305-488 10-213 (355)
172 KOG4721 Serine/threonine prote 99.9 4E-27 8.6E-32 244.2 10.5 173 302-488 120-312 (904)
173 cd05035 PTKc_Axl_like Catalyti 99.9 9.3E-26 2E-30 221.2 19.7 180 308-488 1-217 (273)
174 cd06628 STKc_MAPKKK_Byr2_like 99.9 8.2E-26 1.8E-30 221.4 19.2 180 307-488 1-213 (267)
175 cd05109 PTKc_HER2 Catalytic do 99.9 8.9E-26 1.9E-30 223.4 19.6 182 303-488 4-213 (279)
176 cd05032 PTKc_InsR_like Catalyt 99.9 5.7E-26 1.2E-30 223.8 18.0 184 303-488 3-223 (277)
177 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 8E-26 1.7E-30 224.2 19.1 177 307-488 4-211 (283)
178 cd05049 PTKc_Trk Catalytic dom 99.9 5.8E-26 1.3E-30 224.1 18.0 182 305-488 4-226 (280)
179 cd05039 PTKc_Csk_like Catalyti 99.9 9E-26 2E-30 220.0 19.0 179 304-488 4-201 (256)
180 cd05063 PTKc_EphR_A2 Catalytic 99.9 5.4E-26 1.2E-30 223.2 17.5 182 304-488 3-212 (268)
181 cd05071 PTKc_Src Catalytic dom 99.9 6.1E-26 1.3E-30 223.0 17.8 179 304-488 4-205 (262)
182 cd05053 PTKc_FGFR Catalytic do 99.9 7.9E-26 1.7E-30 225.1 18.9 185 302-488 8-236 (293)
183 cd06630 STKc_MEKK1 Catalytic d 99.9 7.2E-26 1.6E-30 221.7 18.2 180 307-488 1-209 (268)
184 cd07870 STKc_PFTAIRE2 Catalyti 99.9 6.3E-26 1.4E-30 225.8 17.9 179 306-488 5-205 (291)
185 cd06654 STKc_PAK1 Catalytic do 99.9 8.3E-26 1.8E-30 226.5 18.9 177 306-488 20-217 (296)
186 cd05633 STKc_GRK3 Catalytic do 99.9 1E-25 2.2E-30 224.0 19.3 174 313-488 1-197 (279)
187 cd06610 STKc_OSR1_SPAK Catalyt 99.9 1E-25 2.2E-30 220.0 18.7 181 306-488 1-208 (267)
188 cd05062 PTKc_IGF-1R Catalytic 99.9 9.6E-26 2.1E-30 222.9 18.7 183 304-488 4-223 (277)
189 cd05111 PTK_HER3 Pseudokinase 99.9 9.3E-26 2E-30 223.9 18.6 181 304-488 5-213 (279)
190 cd05067 PTKc_Lck_Blk Catalytic 99.9 8.1E-26 1.7E-30 221.2 17.9 180 303-488 3-205 (260)
191 cd08218 STKc_Nek1 Catalytic do 99.9 1.8E-25 4E-30 217.6 20.2 181 307-488 1-202 (256)
192 cd05572 STKc_cGK_PKG Catalytic 99.9 1.4E-25 3.1E-30 219.4 19.5 173 314-488 1-193 (262)
193 cd06626 STKc_MEKK4 Catalytic d 99.9 1.5E-25 3.3E-30 218.6 19.6 179 307-488 1-207 (264)
194 cd06656 STKc_PAK3 Catalytic do 99.9 9.4E-26 2E-30 226.2 18.5 177 306-488 19-216 (297)
195 cd08223 STKc_Nek4 Catalytic do 99.9 1.7E-25 3.7E-30 217.7 19.8 181 307-488 1-203 (257)
196 cd05113 PTKc_Btk_Bmx Catalytic 99.9 7.1E-26 1.5E-30 221.7 17.2 178 305-488 3-203 (256)
197 cd07841 STKc_CDK7 Catalytic do 99.9 8.1E-26 1.7E-30 225.6 17.9 179 307-487 1-203 (298)
198 cd05051 PTKc_DDR Catalytic dom 99.9 1.2E-25 2.5E-30 224.0 18.9 182 305-488 4-235 (296)
199 KOG1026 Nerve growth factor re 99.9 9.3E-27 2E-31 252.6 11.8 185 302-488 482-707 (774)
200 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 1.5E-25 3.3E-30 222.0 19.4 178 306-487 4-211 (284)
201 cd05089 PTKc_Tie1 Catalytic do 99.9 1.2E-25 2.7E-30 225.0 18.9 181 306-488 2-220 (297)
202 cd05055 PTKc_PDGFR Catalytic d 99.9 1.1E-25 2.3E-30 226.6 18.5 184 303-488 32-245 (302)
203 cd05057 PTKc_EGFR_like Catalyt 99.9 1.6E-25 3.6E-30 221.5 19.5 180 305-488 6-213 (279)
204 cd05061 PTKc_InsR Catalytic do 99.9 1.3E-25 2.8E-30 223.6 18.9 184 303-488 3-223 (288)
205 cd06651 STKc_MEKK3 Catalytic d 99.9 2.2E-25 4.8E-30 219.0 20.2 180 307-488 3-210 (266)
206 PHA03207 serine/threonine kina 99.9 6.5E-26 1.4E-30 237.0 17.4 173 305-488 91-288 (392)
207 cd05082 PTKc_Csk Catalytic dom 99.9 1.5E-25 3.2E-30 218.8 18.7 179 303-488 3-201 (256)
208 cd05036 PTKc_ALK_LTK Catalytic 99.9 1.4E-25 3E-30 222.0 18.8 182 305-488 5-223 (277)
209 cd06631 STKc_YSK4 Catalytic do 99.9 1.2E-25 2.7E-30 220.2 18.3 179 307-488 1-209 (265)
210 cd05091 PTKc_Ror2 Catalytic do 99.9 9.3E-26 2E-30 223.5 17.4 183 304-488 3-228 (283)
211 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 1.2E-25 2.7E-30 223.2 18.3 181 304-488 3-203 (284)
212 cd05093 PTKc_TrkB Catalytic do 99.9 1.9E-25 4.1E-30 222.5 19.6 181 305-488 4-224 (288)
213 cd07839 STKc_CDK5 Catalytic do 99.9 4.1E-26 8.9E-31 225.8 14.7 178 307-487 1-200 (284)
214 cd05103 PTKc_VEGFR2 Catalytic 99.9 1.2E-25 2.5E-30 230.6 18.5 184 303-488 4-283 (343)
215 cd06609 STKc_MST3_like Catalyt 99.9 1.6E-25 3.5E-30 220.7 18.8 178 306-488 1-199 (274)
216 cd05075 PTKc_Axl Catalytic dom 99.9 1.7E-25 3.6E-30 219.9 18.7 180 308-488 1-216 (272)
217 cd06640 STKc_MST4 Catalytic do 99.9 2.2E-25 4.7E-30 220.6 19.5 177 307-488 5-202 (277)
218 PTZ00266 NIMA-related protein 99.9 1.3E-25 2.7E-30 253.5 20.0 186 302-488 9-244 (1021)
219 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 1.8E-25 4E-30 220.0 18.8 175 312-488 1-211 (269)
220 cd06617 PKc_MKK3_6 Catalytic d 99.9 1.8E-25 4E-30 220.8 18.9 180 306-488 1-208 (283)
221 cd05579 STKc_MAST_like Catalyt 99.9 1.1E-25 2.4E-30 218.8 17.0 173 314-488 1-202 (265)
222 KOG0607 MAP kinase-interacting 99.9 1.6E-26 3.5E-31 226.3 11.1 172 312-488 84-292 (463)
223 cd05097 PTKc_DDR_like Catalyti 99.9 1.5E-25 3.3E-30 223.9 18.4 182 305-488 4-234 (295)
224 cd05045 PTKc_RET Catalytic dom 99.9 1.7E-25 3.8E-30 222.8 18.7 180 307-488 1-231 (290)
225 cd05606 STKc_beta_ARK Catalyti 99.9 2E-25 4.3E-30 221.6 19.0 174 313-488 1-197 (278)
226 cd00192 PTKc Catalytic domain 99.9 2.5E-25 5.5E-30 215.6 19.2 175 312-488 1-209 (262)
227 cd06636 STKc_MAP4K4_6 Catalyti 99.9 2.1E-25 4.6E-30 220.8 19.0 180 305-488 15-227 (282)
228 KOG0696 Serine/threonine prote 99.9 4.2E-27 9E-32 236.6 6.7 185 302-488 345-551 (683)
229 cd06653 STKc_MEKK3_like_1 Cata 99.9 2.8E-25 6E-30 218.1 19.5 180 307-488 3-210 (264)
230 cd05611 STKc_Rim15_like Cataly 99.9 2.6E-25 5.5E-30 217.4 19.2 175 312-488 2-194 (260)
231 cd05107 PTKc_PDGFR_beta Cataly 99.9 1.5E-25 3.3E-30 235.3 18.9 186 301-488 32-343 (401)
232 cd06608 STKc_myosinIII_like Ca 99.9 2.5E-25 5.5E-30 217.8 19.1 180 305-488 5-219 (275)
233 cd05040 PTKc_Ack_like Catalyti 99.9 2.3E-25 5E-30 217.0 18.7 174 312-488 1-202 (257)
234 cd06607 STKc_TAO Catalytic dom 99.9 3.5E-25 7.6E-30 222.8 20.5 181 306-488 15-215 (307)
235 cd07846 STKc_CDKL2_3 Catalytic 99.9 8.6E-26 1.9E-30 223.5 15.6 179 307-488 2-202 (286)
236 cd05095 PTKc_DDR2 Catalytic do 99.9 2.3E-25 5.1E-30 222.7 18.9 181 306-488 5-235 (296)
237 cd05069 PTKc_Yes Catalytic dom 99.9 1.9E-25 4.1E-30 218.8 17.8 178 305-488 5-205 (260)
238 KOG0695 Serine/threonine prote 99.9 1E-26 2.2E-31 228.7 8.7 187 300-488 244-452 (593)
239 cd06642 STKc_STK25-YSK1 Cataly 99.9 1.2E-25 2.6E-30 222.2 16.4 177 307-488 5-202 (277)
240 cd05098 PTKc_FGFR1 Catalytic d 99.9 1.8E-25 3.9E-30 224.9 17.9 184 303-488 15-244 (307)
241 cd07832 STKc_CCRK Catalytic do 99.9 2.5E-25 5.3E-30 220.0 18.6 179 307-488 1-202 (286)
242 cd07868 STKc_CDK8 Catalytic do 99.9 1.8E-25 3.9E-30 225.4 17.9 172 311-488 6-217 (317)
243 KOG0201 Serine/threonine prote 99.9 6.4E-27 1.4E-31 237.5 7.3 178 307-488 14-212 (467)
244 KOG0196 Tyrosine kinase, EPH ( 99.9 7.4E-27 1.6E-31 249.7 7.9 184 301-487 624-835 (996)
245 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 2.4E-25 5.3E-30 217.8 18.1 180 303-488 3-205 (260)
246 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 2.9E-25 6.2E-30 220.5 18.8 177 307-486 5-211 (284)
247 cd05101 PTKc_FGFR2 Catalytic d 99.9 2.4E-25 5.2E-30 223.5 18.4 184 303-488 12-241 (304)
248 cd05083 PTKc_Chk Catalytic dom 99.9 2.1E-25 4.6E-30 217.4 17.5 177 304-488 4-199 (254)
249 cd06632 STKc_MEKK1_plant Catal 99.9 4.1E-25 9E-30 214.6 19.5 180 307-488 1-203 (258)
250 cd05099 PTKc_FGFR4 Catalytic d 99.9 3.2E-25 6.9E-30 224.0 19.3 184 303-488 9-238 (314)
251 cd07842 STKc_CDK8_like Catalyt 99.9 1.8E-25 3.8E-30 224.4 17.3 181 307-488 1-217 (316)
252 cd08220 STKc_Nek8 Catalytic do 99.9 4.2E-25 9.1E-30 214.5 19.4 181 307-488 1-202 (256)
253 cd05115 PTKc_Zap-70 Catalytic 99.9 3.8E-25 8.3E-30 216.9 19.3 172 313-488 2-200 (257)
254 cd05073 PTKc_Hck Catalytic dom 99.9 4.2E-25 9.2E-30 216.3 19.5 180 303-488 3-205 (260)
255 cd06917 STKc_NAK1_like Catalyt 99.9 3.4E-25 7.3E-30 218.5 18.9 177 307-488 2-203 (277)
256 cd06638 STKc_myosinIIIA Cataly 99.9 3.2E-25 6.9E-30 219.7 18.6 181 304-488 16-230 (286)
257 cd05581 STKc_PDK1 Catalytic do 99.9 1.2E-25 2.7E-30 220.9 15.6 181 306-488 1-223 (280)
258 cd07843 STKc_CDC2L1 Catalytic 99.9 2.4E-25 5.2E-30 221.8 17.8 181 305-488 4-208 (293)
259 PTZ00284 protein kinase; Provi 99.9 2.4E-25 5.1E-30 238.0 19.0 179 303-488 126-346 (467)
260 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 5E-25 1.1E-29 219.3 20.0 181 306-488 1-204 (287)
261 cd07860 STKc_CDK2_3 Catalytic 99.9 1.6E-25 3.5E-30 221.6 16.2 180 307-488 1-202 (284)
262 KOG0574 STE20-like serine/thre 99.9 3.4E-27 7.3E-32 229.4 4.0 176 307-488 34-230 (502)
263 KOG2345 Serine/threonine prote 99.9 4.8E-26 1E-30 216.7 11.8 185 302-489 17-243 (302)
264 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 2.6E-25 5.6E-30 219.3 17.5 180 306-488 4-213 (284)
265 cd05060 PTKc_Syk_like Catalyti 99.9 4.7E-25 1E-29 215.4 19.2 172 312-488 1-200 (257)
266 cd06629 STKc_MAPKKK_Bck1_like 99.9 4.4E-25 9.6E-30 217.1 19.1 180 307-488 2-213 (272)
267 KOG0604 MAP kinase-activated p 99.9 3.3E-26 7.2E-31 222.6 10.8 174 306-487 61-263 (400)
268 PLN00009 cyclin-dependent kina 99.9 4.5E-25 9.7E-30 220.0 19.3 181 306-488 2-205 (294)
269 cd05092 PTKc_TrkA Catalytic do 99.9 3.9E-25 8.4E-30 219.4 18.7 181 305-488 4-226 (280)
270 cd05613 STKc_MSK1_N N-terminal 99.9 3.5E-25 7.5E-30 220.4 18.5 180 307-488 1-209 (290)
271 cd06612 STKc_MST1_2 Catalytic 99.9 5.3E-25 1.2E-29 213.8 19.2 177 306-488 3-200 (256)
272 cd07836 STKc_Pho85 Catalytic d 99.9 3E-25 6.5E-30 219.4 17.7 179 307-488 1-202 (284)
273 cd06623 PKc_MAPKK_plant_like C 99.9 5E-25 1.1E-29 214.7 19.0 178 307-488 2-201 (264)
274 cd05100 PTKc_FGFR3 Catalytic d 99.9 3.8E-25 8.2E-30 225.5 19.0 185 302-488 8-238 (334)
275 cd07833 STKc_CDKL Catalytic do 99.9 2.1E-25 4.6E-30 220.7 16.6 179 307-488 2-203 (288)
276 cd05116 PTKc_Syk Catalytic dom 99.9 5.6E-25 1.2E-29 215.0 19.3 172 313-488 2-200 (257)
277 PF07714 Pkinase_Tyr: Protein 99.9 3.2E-25 7E-30 218.0 17.6 177 310-488 3-207 (259)
278 cd06655 STKc_PAK2 Catalytic do 99.9 3.6E-25 7.9E-30 222.1 18.3 177 306-488 19-216 (296)
279 PHA03209 serine/threonine kina 99.9 2E-25 4.3E-30 230.4 16.9 170 306-486 66-255 (357)
280 cd06641 STKc_MST3 Catalytic do 99.9 4.9E-25 1.1E-29 218.1 18.9 177 307-488 5-202 (277)
281 cd05085 PTKc_Fer Catalytic dom 99.9 6.3E-25 1.4E-29 213.1 19.3 173 312-488 1-196 (250)
282 cd05046 PTK_CCK4 Pseudokinase 99.9 4.1E-25 8.9E-30 217.7 18.2 180 306-487 5-219 (275)
283 cd06605 PKc_MAPKK Catalytic do 99.9 3.4E-25 7.3E-30 216.6 17.3 179 307-488 2-200 (265)
284 cd05050 PTKc_Musk Catalytic do 99.9 3.8E-25 8.3E-30 219.9 17.9 183 304-488 3-234 (288)
285 cd05094 PTKc_TrkC Catalytic do 99.9 5.1E-25 1.1E-29 219.7 18.8 181 305-488 4-227 (291)
286 cd05047 PTKc_Tie Catalytic dom 99.9 7.5E-25 1.6E-29 215.9 19.7 175 312-488 1-213 (270)
287 smart00219 TyrKc Tyrosine kina 99.9 6.4E-25 1.4E-29 212.9 18.8 179 308-488 1-206 (258)
288 cd06635 STKc_TAO1 Catalytic do 99.9 1E-24 2.2E-29 220.7 21.0 180 307-488 26-225 (317)
289 cd06658 STKc_PAK5 Catalytic do 99.9 2.4E-25 5.2E-30 222.9 15.8 176 307-488 23-219 (292)
290 cd07837 STKc_CdkB_plant Cataly 99.9 4.8E-25 1E-29 219.4 17.8 181 306-488 1-213 (295)
291 PHA03211 serine/threonine kina 99.9 3.2E-25 6.9E-30 236.7 17.6 170 306-486 169-361 (461)
292 KOG1095 Protein tyrosine kinas 99.9 1.8E-25 3.9E-30 250.2 16.0 182 305-488 691-906 (1025)
293 cd06606 STKc_MAPKKK Catalytic 99.9 1E-24 2.2E-29 210.5 19.3 179 307-488 1-204 (260)
294 cd06624 STKc_ASK Catalytic dom 99.9 1.1E-24 2.3E-29 214.2 19.7 181 304-488 6-212 (268)
295 cd08217 STKc_Nek2 Catalytic do 99.9 8.3E-25 1.8E-29 212.7 18.6 181 307-488 1-211 (265)
296 cd06639 STKc_myosinIIIB Cataly 99.9 1.1E-24 2.4E-29 216.9 19.6 180 305-488 21-234 (291)
297 cd05110 PTKc_HER4 Catalytic do 99.9 5.9E-25 1.3E-29 220.9 17.8 181 304-488 5-213 (303)
298 cd07867 STKc_CDC2L6 Catalytic 99.9 6E-25 1.3E-29 221.2 17.3 171 312-488 7-217 (317)
299 KOG1094 Discoidin domain recep 99.9 1.5E-25 3.2E-30 233.4 13.1 183 303-488 535-742 (807)
300 KOG0577 Serine/threonine prote 99.9 4.7E-26 1E-30 237.1 9.3 180 306-487 26-225 (948)
301 cd08215 STKc_Nek Catalytic dom 99.9 1.7E-24 3.7E-29 209.3 19.8 181 307-488 1-204 (258)
302 cd05043 PTK_Ryk Pseudokinase d 99.9 1.1E-24 2.3E-29 215.5 18.6 184 303-488 3-221 (280)
303 cd08226 PK_STRAD_beta Pseudoki 99.9 7.7E-25 1.7E-29 222.7 18.0 176 312-488 4-211 (328)
304 cd05041 PTKc_Fes_like Catalyti 99.9 1.4E-24 3.1E-29 210.7 19.0 173 312-488 1-197 (251)
305 KOG0614 cGMP-dependent protein 99.9 6.9E-27 1.5E-31 240.0 2.9 185 302-488 416-620 (732)
306 KOG0984 Mitogen-activated prot 99.9 1.6E-25 3.5E-30 208.2 11.6 190 296-488 36-253 (282)
307 cd08225 STKc_Nek5 Catalytic do 99.9 8E-25 1.7E-29 212.7 17.2 181 307-488 1-203 (257)
308 cd05112 PTKc_Itk Catalytic dom 99.9 1.1E-24 2.5E-29 212.0 18.3 178 305-488 3-203 (256)
309 cd06647 STKc_PAK_I Catalytic d 99.9 8.8E-25 1.9E-29 218.8 17.9 177 306-488 19-216 (293)
310 cd07845 STKc_CDK10 Catalytic d 99.9 7.2E-25 1.6E-29 220.5 17.3 182 304-488 5-210 (309)
311 KOG1152 Signal transduction se 99.9 8.5E-26 1.9E-30 235.0 10.7 179 305-488 560-761 (772)
312 KOG0983 Mitogen-activated prot 99.9 2E-25 4.4E-30 214.9 12.5 181 304-488 90-295 (391)
313 cd05056 PTKc_FAK Catalytic dom 99.9 1.5E-24 3.3E-29 213.3 18.7 181 304-488 4-210 (270)
314 cd07850 STKc_JNK Catalytic dom 99.9 1.1E-24 2.4E-29 224.0 18.3 178 305-488 15-218 (353)
315 cd05122 PKc_STE Catalytic doma 99.9 2.8E-24 6E-29 206.6 19.8 178 307-488 1-198 (253)
316 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 1.2E-24 2.6E-29 211.7 17.4 170 312-487 1-207 (259)
317 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 1.7E-24 3.6E-29 213.1 18.5 173 312-488 1-211 (262)
318 KOG0662 Cyclin-dependent kinas 99.9 6E-26 1.3E-30 207.0 7.5 150 307-459 3-152 (292)
319 cd06616 PKc_MKK4 Catalytic dom 99.9 8.5E-25 1.9E-29 217.1 16.4 181 305-488 3-211 (288)
320 cd07880 STKc_p38gamma_MAPK12 C 99.9 1.1E-24 2.4E-29 223.4 17.7 179 305-488 14-217 (343)
321 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 1.3E-24 2.7E-29 215.6 17.6 172 313-488 2-223 (274)
322 cd06627 STKc_Cdc7_like Catalyt 99.9 3.5E-24 7.5E-29 207.3 20.2 179 307-488 1-200 (254)
323 cd05086 PTKc_Aatyk2 Catalytic 99.9 2E-24 4.4E-29 212.8 19.0 175 312-488 1-210 (268)
324 cd06659 STKc_PAK6 Catalytic do 99.9 9E-25 2E-29 219.3 16.6 176 307-488 22-218 (297)
325 cd06614 STKc_PAK Catalytic dom 99.9 2.7E-24 5.9E-29 213.5 19.9 179 305-488 18-217 (286)
326 PHA03210 serine/threonine kina 99.9 7.3E-25 1.6E-29 236.5 16.9 182 304-486 146-367 (501)
327 cd07849 STKc_ERK1_2_like Catal 99.9 7.5E-25 1.6E-29 223.5 15.9 177 306-488 5-211 (336)
328 cd05044 PTKc_c-ros Catalytic d 99.9 9.4E-25 2E-29 214.2 15.9 175 312-488 1-215 (269)
329 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 7.4E-25 1.6E-29 214.6 15.1 172 312-487 1-206 (258)
330 cd07865 STKc_CDK9 Catalytic do 99.9 1.4E-24 3.1E-29 217.0 17.3 181 305-488 11-225 (310)
331 cd05123 STKc_AGC Catalytic dom 99.9 2.7E-24 5.9E-29 208.1 18.3 173 314-488 1-194 (250)
332 cd05058 PTKc_Met_Ron Catalytic 99.9 2.9E-24 6.3E-29 209.9 18.6 173 312-487 1-203 (262)
333 cd07858 STKc_TEY_MAPK_plant Ca 99.9 1.2E-24 2.7E-29 222.2 16.6 179 306-488 5-210 (337)
334 cd06633 STKc_TAO3 Catalytic do 99.9 5.9E-24 1.3E-28 215.0 21.4 179 308-488 23-221 (313)
335 cd07840 STKc_CDK9_like Catalyt 99.9 1.9E-24 4.1E-29 213.2 17.3 178 308-488 1-203 (287)
336 PHA03390 pk1 serine/threonine- 99.9 2.9E-24 6.3E-29 212.2 18.6 173 306-488 14-207 (267)
337 cd08530 STKc_CNK2-like Catalyt 99.9 2.5E-24 5.3E-29 208.9 17.7 181 307-488 1-202 (256)
338 KOG0579 Ste20-like serine/thre 99.9 6.1E-26 1.3E-30 237.3 6.7 147 306-456 32-178 (1187)
339 cd05610 STKc_MASTL Catalytic d 99.9 1.6E-24 3.5E-29 241.4 18.4 153 305-459 3-155 (669)
340 KOG0666 Cyclin C-dependent kin 99.9 6.2E-26 1.3E-30 221.7 6.2 184 304-489 22-219 (438)
341 cd07835 STKc_CDK1_like Catalyt 99.9 1.9E-24 4.2E-29 213.8 17.1 179 308-488 1-201 (283)
342 cd06648 STKc_PAK_II Catalytic 99.9 5.1E-24 1.1E-28 212.3 19.8 176 307-488 20-216 (285)
343 cd07855 STKc_ERK5 Catalytic do 99.9 1.1E-24 2.3E-29 222.1 15.1 179 306-488 5-213 (334)
344 cd07831 STKc_MOK Catalytic dom 99.9 4.1E-24 8.9E-29 210.8 18.6 176 308-488 1-200 (282)
345 cd07864 STKc_CDK12 Catalytic d 99.9 2.1E-24 4.5E-29 215.5 16.6 182 304-488 5-219 (302)
346 cd07877 STKc_p38alpha_MAPK14 C 99.9 3.3E-24 7.2E-29 220.0 18.4 178 306-488 17-219 (345)
347 cd08216 PK_STRAD Pseudokinase 99.9 3.7E-24 8.1E-29 215.3 18.2 170 318-488 12-211 (314)
348 KOG4279 Serine/threonine prote 99.9 2.2E-25 4.8E-30 235.2 9.6 173 312-488 581-779 (1226)
349 cd08528 STKc_Nek10 Catalytic d 99.9 4.3E-24 9.4E-29 209.7 18.1 182 307-488 1-214 (269)
350 cd05583 STKc_MSK_N N-terminal 99.9 3.3E-24 7.2E-29 213.1 17.5 180 307-488 1-209 (288)
351 cd05074 PTKc_Tyro3 Catalytic d 99.9 6E-24 1.3E-28 208.9 18.7 180 308-488 1-217 (273)
352 cd07838 STKc_CDK4_6_like Catal 99.9 7.3E-24 1.6E-28 209.3 19.4 179 308-488 1-207 (287)
353 cd06618 PKc_MKK7 Catalytic dom 99.9 4.2E-24 9.2E-29 213.6 17.7 186 299-488 8-219 (296)
354 cd06657 STKc_PAK4 Catalytic do 99.9 5.7E-24 1.2E-28 213.2 18.1 175 308-488 22-217 (292)
355 PTZ00024 cyclin-dependent prot 99.9 3.8E-24 8.2E-29 217.9 17.1 180 306-488 8-235 (335)
356 cd06634 STKc_TAO2 Catalytic do 99.9 8.6E-24 1.9E-28 213.1 19.4 181 306-488 15-215 (308)
357 cd07852 STKc_MAPK15 Catalytic 99.9 4.6E-24 1E-28 217.6 17.5 179 305-488 6-214 (337)
358 cd07834 STKc_MAPK Catalytic do 99.9 2.5E-24 5.4E-29 218.4 14.8 178 307-488 1-208 (330)
359 KOG0584 Serine/threonine prote 99.9 5.6E-25 1.2E-29 231.7 10.3 179 308-488 42-244 (632)
360 cd07830 STKc_MAK_like Catalyti 99.9 5.5E-24 1.2E-28 210.3 16.9 178 308-488 1-200 (283)
361 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 6.5E-24 1.4E-28 216.5 17.8 179 305-488 9-207 (328)
362 PHA02882 putative serine/threo 99.9 7.3E-24 1.6E-28 212.4 17.7 181 305-488 11-234 (294)
363 KOG4278 Protein tyrosine kinas 99.9 5.8E-25 1.3E-29 229.7 10.0 186 299-488 260-468 (1157)
364 KOG4645 MAPKKK (MAP kinase kin 99.9 8.6E-26 1.9E-30 252.1 3.6 180 306-488 1235-1442(1509)
365 cd05118 STKc_CMGC Catalytic do 99.9 5.8E-24 1.3E-28 209.6 16.1 178 308-488 1-200 (283)
366 cd07866 STKc_BUR1 Catalytic do 99.9 5.2E-24 1.1E-28 213.0 15.7 181 305-488 7-228 (311)
367 KOG0199 ACK and related non-re 99.9 8.4E-25 1.8E-29 231.4 10.2 184 302-488 106-317 (1039)
368 KOG4257 Focal adhesion tyrosin 99.9 3.3E-24 7.2E-29 224.5 14.4 183 302-488 385-594 (974)
369 cd07829 STKc_CDK_like Catalyti 99.9 7.9E-24 1.7E-28 208.5 16.0 178 308-488 1-200 (282)
370 cd07854 STKc_MAPK4_6 Catalytic 99.9 8.1E-24 1.7E-28 216.7 15.5 176 306-488 5-220 (342)
371 cd07851 STKc_p38 Catalytic dom 99.9 7.8E-24 1.7E-28 216.9 14.7 179 305-488 14-217 (343)
372 cd07857 STKc_MPK1 Catalytic do 99.9 1.9E-23 4.1E-28 212.8 17.3 178 307-488 1-211 (332)
373 KOG1006 Mitogen-activated prot 99.9 6E-25 1.3E-29 211.0 5.6 181 305-488 63-270 (361)
374 KOG0596 Dual specificity; seri 99.9 1.3E-23 2.8E-28 218.2 15.6 179 305-488 360-573 (677)
375 cd05576 STKc_RPK118_like Catal 99.9 1.7E-23 3.8E-28 202.9 15.3 162 317-488 4-183 (237)
376 cd07879 STKc_p38delta_MAPK13 C 99.9 1.9E-23 4.1E-28 214.0 16.2 177 306-488 15-216 (342)
377 cd08222 STKc_Nek11 Catalytic d 99.9 2.2E-23 4.7E-28 203.7 15.1 181 307-488 1-206 (260)
378 KOG1035 eIF-2alpha kinase GCN2 99.9 3.8E-24 8.2E-29 238.1 10.1 178 305-485 478-791 (1351)
379 PRK09188 serine/threonine prot 99.9 3.2E-23 6.9E-28 214.0 15.0 143 304-459 16-163 (365)
380 KOG1025 Epidermal growth facto 99.9 1E-23 2.2E-28 226.4 10.3 178 307-488 697-902 (1177)
381 KOG0664 Nemo-like MAPK-related 99.9 7.7E-25 1.7E-29 210.7 1.4 178 306-487 53-235 (449)
382 KOG3653 Transforming growth fa 99.9 3.4E-23 7.3E-28 212.0 12.3 172 305-487 209-396 (534)
383 smart00221 STYKc Protein kinas 99.9 4E-22 8.6E-27 188.8 17.7 178 308-488 1-201 (225)
384 KOG0603 Ribosomal protein S6 k 99.9 8.1E-23 1.7E-27 216.1 13.8 174 305-488 321-514 (612)
385 KOG1151 Tousled-like protein k 99.9 4E-23 8.8E-28 209.4 9.5 183 304-488 461-685 (775)
386 KOG0671 LAMMER dual specificit 99.9 4.3E-23 9.3E-28 206.7 9.2 179 305-488 88-310 (415)
387 KOG0587 Traf2- and Nck-interac 99.9 2.8E-22 6E-27 217.5 15.6 178 306-487 19-228 (953)
388 cd05147 RIO1_euk RIO kinase fa 99.9 2.7E-22 5.9E-27 189.8 13.1 143 311-459 2-168 (190)
389 KOG1345 Serine/threonine kinas 99.9 4.4E-23 9.5E-28 198.7 6.5 176 306-488 24-226 (378)
390 KOG0669 Cyclin T-dependent kin 99.9 3.9E-24 8.4E-29 204.0 -1.9 180 306-488 17-207 (376)
391 PLN00113 leucine-rich repeat r 99.9 1.5E-21 3.2E-26 226.0 17.9 169 307-488 691-879 (968)
392 cd05145 RIO1_like RIO kinase f 99.9 2.4E-21 5.3E-26 182.9 15.8 143 311-460 2-169 (190)
393 KOG2052 Activin A type IB rece 99.9 5.2E-22 1.1E-26 202.1 11.6 143 306-459 211-367 (513)
394 PLN03225 Serine/threonine-prot 99.9 1.2E-21 2.7E-26 214.0 15.4 178 303-487 129-379 (566)
395 PLN03224 probable serine/threo 99.9 3.9E-21 8.5E-26 206.4 18.2 156 302-457 141-358 (507)
396 smart00220 S_TKc Serine/Threon 99.9 6.2E-21 1.3E-25 181.7 16.4 167 318-488 1-187 (244)
397 KOG0668 Casein kinase II, alph 99.9 4.7E-22 1E-26 187.6 7.8 144 305-459 37-184 (338)
398 KOG0200 Fibroblast/platelet-de 99.9 4.4E-21 9.6E-26 211.4 16.7 186 301-488 291-523 (609)
399 cd00180 PKc Catalytic domain o 99.8 8.1E-20 1.7E-24 169.0 18.9 143 314-459 1-144 (215)
400 KOG0665 Jun-N-terminal kinase 99.8 4E-21 8.6E-26 188.9 7.2 177 305-488 16-218 (369)
401 KOG1164 Casein kinase (serine/ 99.8 1E-19 2.2E-24 185.7 16.7 178 307-488 19-238 (322)
402 PRK10345 hypothetical protein; 99.8 1.4E-19 3.1E-24 173.8 15.4 139 308-457 4-159 (210)
403 KOG0670 U4/U6-associated splic 99.8 1.1E-20 2.4E-25 195.0 7.3 180 304-488 430-636 (752)
404 PRK10359 lipopolysaccharide co 99.8 5.4E-20 1.2E-24 178.3 11.6 143 304-459 29-185 (232)
405 KOG1163 Casein kinase (serine/ 99.8 4.4E-20 9.6E-25 175.5 10.2 179 303-488 12-222 (341)
406 KOG0576 Mitogen-activated prot 99.8 3.2E-21 7E-26 203.9 1.3 175 306-485 15-204 (829)
407 smart00090 RIO RIO-like kinase 99.8 9.8E-19 2.1E-23 171.2 13.5 147 307-460 29-200 (237)
408 KOG1165 Casein kinase (serine/ 99.8 1.1E-18 2.3E-23 172.6 12.7 176 306-488 28-237 (449)
409 PRK14879 serine/threonine prot 99.8 3.4E-18 7.4E-23 162.8 15.5 140 311-459 1-145 (211)
410 KOG1027 Serine/threonine prote 99.8 1.2E-18 2.6E-23 188.6 10.8 167 307-482 510-687 (903)
411 PRK12274 serine/threonine prot 99.8 1.5E-17 3.3E-22 158.6 15.1 137 308-459 4-143 (218)
412 TIGR03724 arch_bud32 Kae1-asso 99.8 1.3E-17 2.7E-22 157.6 14.3 135 313-459 1-140 (199)
413 KOG1290 Serine/threonine prote 99.7 1.3E-17 2.8E-22 171.7 13.7 137 303-444 75-224 (590)
414 cd05144 RIO2_C RIO kinase fami 99.7 1.6E-17 3.4E-22 157.6 13.1 140 308-460 17-177 (198)
415 COG0515 SPS1 Serine/threonine 99.7 1E-16 2.2E-21 156.0 17.5 148 308-458 2-152 (384)
416 PRK09605 bifunctional UGMP fam 99.7 3.5E-17 7.6E-22 178.2 15.6 141 306-459 333-478 (535)
417 KOG1024 Receptor-like protein 99.7 1.6E-17 3.5E-22 167.0 11.0 184 303-488 281-500 (563)
418 PF13426 PAS_9: PAS domain; PD 99.7 3.7E-17 8.1E-22 136.0 11.0 104 77-225 1-104 (104)
419 KOG1167 Serine/threonine prote 99.7 1.1E-17 2.4E-22 169.9 7.7 141 306-456 36-181 (418)
420 cd05119 RIO RIO kinase family, 99.7 1.6E-16 3.4E-21 148.4 13.2 140 311-460 2-166 (187)
421 PRK01723 3-deoxy-D-manno-octul 99.7 1.6E-15 3.5E-20 148.6 15.3 139 312-459 37-193 (239)
422 cd05120 APH_ChoK_like Aminogly 99.6 2.5E-15 5.4E-20 132.8 12.5 133 310-458 2-139 (155)
423 KOG1166 Mitotic checkpoint ser 99.6 1.2E-15 2.5E-20 171.7 10.8 149 300-457 692-850 (974)
424 KOG0603 Ribosomal protein S6 k 99.6 9.7E-17 2.1E-21 170.3 0.8 173 313-488 1-192 (612)
425 PLN00181 protein SPA1-RELATED; 99.6 1.7E-15 3.6E-20 172.4 5.4 123 364-488 30-216 (793)
426 TIGR01982 UbiB 2-polyprenylphe 99.5 4.8E-14 1E-18 149.8 11.9 148 306-459 118-308 (437)
427 PRK13557 histidine kinase; Pro 99.5 9.3E-14 2E-18 149.6 14.3 126 66-233 29-154 (540)
428 PRK04750 ubiB putative ubiquin 99.5 1.2E-14 2.7E-19 156.9 6.5 148 304-459 118-315 (537)
429 KOG0590 Checkpoint kinase and 99.5 1E-14 2.3E-19 160.0 4.3 177 309-488 321-526 (601)
430 PRK13559 hypothetical protein; 99.5 4.1E-13 8.9E-18 138.3 14.4 125 65-231 41-165 (361)
431 PF14531 Kinase-like: Kinase-l 99.5 1.4E-13 3E-18 137.5 10.3 181 307-488 13-251 (288)
432 PF08448 PAS_4: PAS fold; Int 99.5 2.6E-13 5.7E-18 114.0 10.2 110 73-228 1-110 (110)
433 PF00989 PAS: PAS fold; Inter 99.5 4.9E-13 1.1E-17 113.0 11.2 111 68-223 2-113 (113)
434 KOG0501 K+-channel KCNQ [Inorg 99.4 2.8E-13 6.1E-18 141.2 10.1 124 69-232 16-142 (971)
435 KOG4158 BRPK/PTEN-induced prot 99.4 1.9E-13 4.1E-18 138.3 3.2 89 364-456 274-393 (598)
436 cd05151 ChoK Choline Kinase (C 99.4 3.4E-12 7.4E-17 116.9 10.6 128 311-457 3-136 (170)
437 cd05146 RIO3_euk RIO kinase fa 99.3 5.4E-11 1.2E-15 113.0 14.0 141 311-459 2-175 (197)
438 PRK11091 aerobic respiration c 99.3 3.1E-11 6.7E-16 137.2 13.9 122 67-233 155-276 (779)
439 TIGR02040 PpsR-CrtJ transcript 99.3 3E-11 6.5E-16 128.4 12.2 128 55-231 239-369 (442)
440 PRK13558 bacterio-opsin activa 99.3 4E-11 8.6E-16 133.9 13.2 125 69-235 150-274 (665)
441 PRK13560 hypothetical protein; 99.2 4.1E-11 8.8E-16 135.5 13.0 135 54-234 187-328 (807)
442 KOG0606 Microtubule-associated 99.2 4.6E-12 9.9E-17 141.2 5.0 109 306-456 83-191 (1205)
443 COG3642 Mn2+-dependent serine/ 99.2 2.2E-10 4.9E-15 106.5 13.8 136 312-459 2-142 (204)
444 KOG0195 Integrin-linked kinase 99.2 6.7E-12 1.5E-16 121.8 3.2 183 303-488 187-390 (448)
445 TIGR02938 nifL_nitrog nitrogen 99.2 3.5E-11 7.7E-16 127.4 8.8 121 68-233 5-125 (494)
446 PRK10060 RNase II stability mo 99.2 1E-10 2.3E-15 130.7 12.8 131 56-232 99-232 (663)
447 KOG1240 Protein kinase contain 99.2 7E-12 1.5E-16 140.0 3.2 142 307-454 24-166 (1431)
448 smart00750 KIND kinase non-cat 99.2 7E-11 1.5E-15 108.7 8.9 89 391-488 1-105 (176)
449 KOG3087 Serine/threonine prote 99.2 4.6E-10 1E-14 104.2 13.1 147 310-458 11-166 (229)
450 PRK11359 cyclic-di-GMP phospho 99.1 2.1E-10 4.6E-15 130.1 11.4 133 54-231 123-256 (799)
451 cd05154 ACAD10_11_like Acyl-Co 99.1 5.5E-10 1.2E-14 106.3 11.5 142 311-458 3-207 (223)
452 PRK09776 putative diguanylate 99.1 3.6E-10 7.8E-15 132.6 11.9 138 53-233 518-661 (1092)
453 PRK09776 putative diguanylate 99.1 5.1E-10 1.1E-14 131.4 11.3 125 65-234 281-406 (1092)
454 TIGR00229 sensory_box PAS doma 99.1 1.4E-09 3.1E-14 87.2 10.5 117 69-231 5-122 (124)
455 PRK15123 lipopolysaccharide co 99.0 1E-08 2.2E-13 102.3 15.7 135 321-457 37-194 (268)
456 KOG0590 Checkpoint kinase and 99.0 3.9E-11 8.4E-16 132.0 -2.4 152 306-459 20-176 (601)
457 KOG1243 Protein kinase [Genera 99.0 2.3E-09 5E-14 115.6 10.1 165 308-483 15-199 (690)
458 PF01163 RIO1: RIO1 family; I 98.9 8E-09 1.7E-13 97.7 11.0 128 322-459 2-157 (188)
459 PF08447 PAS_3: PAS fold; Int 98.9 6E-09 1.3E-13 85.3 8.5 85 92-219 1-90 (91)
460 PRK13560 hypothetical protein; 98.9 5.7E-09 1.2E-13 118.0 10.7 152 53-234 314-473 (807)
461 KOG1023 Natriuretic peptide re 98.9 4.6E-09 1E-13 111.7 9.0 128 360-488 1-159 (484)
462 cd00130 PAS PAS domain; PAS mo 98.8 8.8E-08 1.9E-12 72.8 12.3 102 77-223 2-103 (103)
463 PRK11073 glnL nitrogen regulat 98.8 2.7E-08 6E-13 101.7 10.4 115 67-233 7-121 (348)
464 KOG0601 Cyclin-dependent kinas 98.8 5.3E-09 1.1E-13 111.5 5.2 153 301-456 260-415 (524)
465 KOG3741 Poly(A) ribonuclease s 98.7 1.5E-07 3.2E-12 99.2 13.5 164 318-484 288-473 (655)
466 PRK11360 sensory histidine kin 98.7 1.7E-07 3.8E-12 101.6 13.6 119 68-234 263-382 (607)
467 PF06293 Kdo: Lipopolysacchari 98.7 2.3E-07 5.1E-12 88.8 12.6 108 350-459 55-172 (206)
468 PRK11359 cyclic-di-GMP phospho 98.7 7.3E-08 1.6E-12 109.5 10.2 116 69-231 14-133 (799)
469 COG0661 AarF Predicted unusual 98.7 6.7E-08 1.5E-12 104.3 9.3 149 305-459 125-316 (517)
470 PRK09902 hypothetical protein; 98.6 5.8E-07 1.3E-11 86.2 13.8 141 315-457 27-179 (216)
471 TIGR02966 phoR_proteo phosphat 98.6 8.7E-08 1.9E-12 96.1 8.4 106 67-230 6-111 (333)
472 COG0478 RIO-like serine/threon 98.6 4.1E-07 8.8E-12 89.6 11.6 139 308-458 93-252 (304)
473 KOG0601 Cyclin-dependent kinas 98.5 4.2E-08 9E-13 104.8 3.7 151 306-459 114-274 (524)
474 TIGR02040 PpsR-CrtJ transcript 98.5 1.6E-07 3.5E-12 99.9 7.2 112 73-233 2-114 (442)
475 KOG1033 eIF-2alpha kinase PEK/ 98.4 4.3E-08 9.3E-13 103.3 0.1 78 379-459 329-407 (516)
476 PF06176 WaaY: Lipopolysacchar 98.4 6E-06 1.3E-10 79.6 13.4 143 303-458 28-184 (229)
477 KOG1229 3'5'-cyclic nucleotide 98.3 2.3E-07 5E-12 94.9 2.9 110 66-219 156-265 (775)
478 COG1718 RIO1 Serine/threonine 98.3 9.9E-06 2.2E-10 79.1 13.1 139 312-459 54-217 (268)
479 PF13596 PAS_10: PAS domain; P 98.3 5.2E-06 1.1E-10 70.5 9.3 106 69-224 1-106 (106)
480 KOG0606 Microtubule-associated 98.3 1.1E-07 2.4E-12 106.8 -1.4 150 303-454 801-950 (1205)
481 KOG1235 Predicted unusual prot 98.3 5.5E-06 1.2E-10 89.5 11.3 140 312-460 167-357 (538)
482 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 1.5E-05 3.2E-10 77.6 13.2 136 312-457 7-182 (226)
483 TIGR02938 nifL_nitrog nitrogen 98.2 1.9E-06 4.2E-11 91.3 5.9 130 54-232 113-257 (494)
484 PF12860 PAS_7: PAS fold 98.2 5.1E-06 1.1E-10 71.6 7.5 114 73-231 1-115 (115)
485 PF01636 APH: Phosphotransfera 98.1 4.5E-05 9.8E-10 72.5 13.5 141 311-458 2-198 (239)
486 PF13095 FTA2: Kinetochore Sim 98.1 3.4E-05 7.3E-10 73.6 12.3 128 306-455 37-206 (207)
487 COG2202 AtoS FOG: PAS/PAC doma 98.1 5.7E-05 1.2E-09 66.0 11.9 116 69-229 114-231 (232)
488 cd05150 APH Aminoglycoside 3'- 98.0 6.9E-05 1.5E-09 73.1 13.0 137 313-457 5-193 (244)
489 PRK11006 phoR phosphate regulo 98.0 1.3E-05 2.9E-10 84.8 8.2 51 65-118 96-146 (430)
490 COG5002 VicK Signal transducti 98.0 2.7E-05 5.8E-10 78.6 9.4 120 62-234 106-226 (459)
491 PRK10820 DNA-binding transcrip 98.0 2E-05 4.3E-10 86.0 8.7 105 67-226 80-188 (520)
492 PF10707 YrbL-PhoP_reg: PhoP r 97.9 0.00038 8.2E-09 66.5 15.9 137 311-457 6-172 (199)
493 PLN02876 acyl-CoA dehydrogenas 97.9 9.4E-05 2E-09 85.1 13.5 80 311-392 43-130 (822)
494 KOG1266 Protein kinase [Signal 97.9 1.9E-05 4.1E-10 79.5 5.7 92 360-451 121-221 (458)
495 PF14598 PAS_11: PAS domain; P 97.8 0.0002 4.4E-09 61.8 10.0 94 89-225 11-108 (111)
496 COG2112 Predicted Ser/Thr prot 97.7 0.0003 6.5E-09 65.6 11.1 134 306-459 22-157 (201)
497 PRK11086 sensory histidine kin 97.6 0.00019 4.1E-09 77.7 9.5 108 68-232 222-332 (542)
498 cd05155 APH_ChoK_like_1 Unchar 97.6 0.00048 1E-08 67.0 10.8 74 311-394 2-82 (235)
499 cd05157 ETNK_euk Ethanolamine 97.6 0.00063 1.4E-08 65.8 11.4 75 311-393 3-79 (235)
500 PRK11388 DNA-binding transcrip 97.5 0.00048 1E-08 77.1 11.2 106 68-226 204-309 (638)
No 1
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-37 Score=304.65 Aligned_cols=184 Identities=41% Similarity=0.714 Sum_probs=167.7
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 382 (489)
...++|++++.||+|+||+|+.++.+.|++.||+|+++|......+.++....|..||..++||+||.++..|++...+|
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLy 101 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLY 101 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEE
Confidence 45678999999999999999999999999999999999998888888999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC---
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS--- 459 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~--- 459 (489)
+|+||+.||+|+.+|.++ +.++|+.+++++++|+.||.|||++|||||||||+|||||..|+|+|+|||+|+...
T Consensus 102 lVld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~ 179 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG 179 (357)
T ss_pred EEEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC
Confidence 999999999999999886 449999999999999999999999999999999999999999999999999996321
Q ss_pred ------CC-Ccee-----------ecccccchHHHHHHHHhCCcccC
Q 042772 460 ------CK-PQVF-----------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ------~~-~~~~-----------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|. +++. ...|-|++|.++|+|++|..||.
T Consensus 180 ~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~ 226 (357)
T KOG0598|consen 180 DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFY 226 (357)
T ss_pred CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCc
Confidence 11 2222 23477999999999999999996
No 2
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=298.70 Aligned_cols=181 Identities=27% Similarity=0.462 Sum_probs=162.3
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
.++|...+.||+|+||+||+|.++.++..||||.+.+... ..+.++.+..|+.+|+.++|||||.+++++..++.+|+|
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 4679999999999999999999999999999999987754 566778888999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC------CcEEEEecCCcccc
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD------GHVVLTDFDLSFMT 458 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~------g~vKL~DFGlS~~~ 458 (489)
||||.||+|.+|+.+.. .+++..++.++.||+.||++||+++||||||||+||||+.. -.+||+|||+|+.+
T Consensus 88 MEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 99999999999999874 59999999999999999999999999999999999999865 46899999999865
Q ss_pred C--------CC------Ccee------ecccccchHHHHHHHHhCCcccC
Q 042772 459 S--------CK------PQVF------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 ~--------~~------~~~~------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
. |. |+++ ..+|.|+.|.+++++++|..||.
T Consensus 166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~ 215 (429)
T KOG0595|consen 166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFD 215 (429)
T ss_pred CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcc
Confidence 4 22 2222 34588999999999999999996
No 3
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-35 Score=298.16 Aligned_cols=178 Identities=58% Similarity=1.026 Sum_probs=169.4
Q ss_pred CCCCCCCCCchhHHHHhhc-CCCccccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHH
Q 042772 279 FPRPHKRDNSSWIAIQKIT-GSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIER 357 (489)
Q Consensus 279 ~p~p~~~~~~s~~~~~~~~-~~~~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~ 357 (489)
...|+...+..|.++..+. ..+..+++.+|++++.||.|.-|+||+|+.++++..+|+|++++..+..++.+.++..|.
T Consensus 49 ~~kph~~~d~~w~a~~~~~~~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~ 128 (459)
T KOG0610|consen 49 GNKPHKGNDVRWEAISSIRNSKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTER 128 (459)
T ss_pred cCCCCCCCchhhhhhccccccCCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHH
Confidence 4568888888898888776 467788999999999999999999999999999999999999999998899999999999
Q ss_pred HHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 042772 358 EIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPE 437 (489)
Q Consensus 358 ~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~ 437 (489)
+||+.++||++++||..|+++...|++||||+||+|..++++++.+.+++..+++++++|+.||+|||.+|||+|||||+
T Consensus 129 eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPE 208 (459)
T KOG0610|consen 129 EILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPE 208 (459)
T ss_pred HHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCcEEEEecCCcc
Q 042772 438 NILLQKDGHVVLTDFDLSF 456 (489)
Q Consensus 438 NILld~~g~vKL~DFGlS~ 456 (489)
||||.++|+|.|+||.+|.
T Consensus 209 NILvredGHIMLsDFDLS~ 227 (459)
T KOG0610|consen 209 NILVREDGHIMLSDFDLSL 227 (459)
T ss_pred eeEEecCCcEEeeeccccc
Confidence 9999999999999999984
No 4
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-36 Score=289.05 Aligned_cols=184 Identities=40% Similarity=0.752 Sum_probs=167.4
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 382 (489)
..+++|+.++.||.|+||+|.+++.+.+|..||+|++++........++...+|..+|+.+.||+++++++.|.+..++|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 45678999999999999999999999999999999999988878888899999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC---
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS--- 459 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~--- 459 (489)
+||||++||.|+++|++. +.+++..++++++||+.||+|||+++|++|||||+|||||.+|++||+|||+|....
T Consensus 121 mvmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT 198 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRT 198 (355)
T ss_pred EEEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcE
Confidence 999999999999999986 449999999999999999999999999999999999999999999999999996433
Q ss_pred ----CCCceeecc-----------cccchHHHHHHHHhCCcccC
Q 042772 460 ----CKPQVFYHA-----------HVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----~~~~~~~~~-----------~v~s~g~~a~e~~~G~lpY~ 488 (489)
..|+++.++ |-|++|...|||+.|..||-
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~ 242 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFY 242 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCc
Confidence 234444333 66888999999999999984
No 5
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3.1e-35 Score=304.05 Aligned_cols=155 Identities=41% Similarity=0.746 Sum_probs=149.2
Q ss_pred CccccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC
Q 042772 300 GEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST 379 (489)
Q Consensus 300 ~~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 379 (489)
...++.++|.++++||+|+||.||+|+.+.||..+|+|+++++.+...+.+..++.|..+|...++|+||++|.+|++..
T Consensus 135 R~r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~ 214 (550)
T KOG0605|consen 135 RTRLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE 214 (550)
T ss_pred cccCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC
Confidence 33668899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcc
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSF 456 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~ 456 (489)
++||||||+|||++..+|.+. ++|+++.+++++++++.|++.||+.|+|||||||+|+|||..||+||+|||||.
T Consensus 215 ~LYLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~ 289 (550)
T KOG0605|consen 215 YLYLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLST 289 (550)
T ss_pred eeEEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccc
Confidence 999999999999999999886 569999999999999999999999999999999999999999999999999984
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-34 Score=301.50 Aligned_cols=181 Identities=29% Similarity=0.479 Sum_probs=167.3
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
.+|...+.||+|+|++||.+++..+|+.||+|++.+..+......+++.+|++|-+.|+|||||+++++|++.+++|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 46999999999999999999999999999999999988888888999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
|+|+.++|..+++++ ++++|.+++.++.||+.||.|||+++|+|||||..|+|++++.+|||+|||||+.+..
T Consensus 98 ELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk 175 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERK 175 (592)
T ss_pred EecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCccccc
Confidence 999999999999965 6699999999999999999999999999999999999999999999999999976541
Q ss_pred -----CCceee-----------cccccchHHHHHHHHhCCcccC
Q 042772 461 -----KPQVFY-----------HAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -----~~~~~~-----------~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.|.++. ..|+|+.|+++|.+++|..||.
T Consensus 176 ~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFe 219 (592)
T KOG0575|consen 176 KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFE 219 (592)
T ss_pred ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcc
Confidence 233332 3389999999999999999996
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-34 Score=290.45 Aligned_cols=182 Identities=30% Similarity=0.493 Sum_probs=154.9
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccc----hHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCe
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN----RNKVHRACIEREIMSLLDHPFLPTLYASFQTSTH 380 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~----~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 380 (489)
.+.|-+.+.||+|+||.|.+|..+.||+.||||++++..... ......+.+|++||++|+|||||+++++|.....
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 356889999999999999999999999999999998876543 2234456789999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC---CcEEEEecCCccc
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD---GHVVLTDFDLSFM 457 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~---g~vKL~DFGlS~~ 457 (489)
.|+||||+.||+|++++..+ +.+.++.-..++.|++.|+.|||++||+||||||+|||+..+ ..+||+|||+|..
T Consensus 251 ~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred eEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence 99999999999999999887 448999999999999999999999999999999999999765 7899999999975
Q ss_pred cC--------C------CCceee---------cccccchHHHHHHHHhCCcccC
Q 042772 458 TS--------C------KPQVFY---------HAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 458 ~~--------~------~~~~~~---------~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.. | +|+++. ..|+|++|++++..++|.+||.
T Consensus 329 ~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS 382 (475)
T KOG0615|consen 329 SGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFS 382 (475)
T ss_pred cccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcc
Confidence 53 2 233221 2266777777777777777774
No 8
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-34 Score=297.20 Aligned_cols=185 Identities=37% Similarity=0.577 Sum_probs=167.7
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCe
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTH 380 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~ 380 (489)
.....+|.+.+.||.|+|++|++|..+.+++.||||++.+......+.++.+.+|..+|.+| .||.|++|+-.|+++..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 44567899999999999999999999999999999999999888888889999999999999 79999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC 460 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~ 460 (489)
+|+|+||+++|+|.++|++. +.|++..++++++||+.||+|||++|||||||||+|||||+++++||+|||.|..+..
T Consensus 149 LYFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred eEEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 99999999999999999987 4599999999999999999999999999999999999999999999999999865431
Q ss_pred C----------------------------------CceeecccccchHHHHHHHHhCCcccC
Q 042772 461 K----------------------------------PQVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ~----------------------------------~~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
. ......+|+|.+|+++|.|+.|..||-
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFr 288 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFR 288 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCc
Confidence 0 111234488999999999999999984
No 9
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-34 Score=283.16 Aligned_cols=184 Identities=27% Similarity=0.446 Sum_probs=163.4
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC-e
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST-H 380 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~-~ 380 (489)
.+.+++.+.++.||+|..|+||+|.++.|++.+|+|++... .+....+++.+|+++++.++||+||.+|++|..+. .
T Consensus 75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~ 152 (364)
T KOG0581|consen 75 GISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEE 152 (364)
T ss_pred ccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCce
Confidence 45667899999999999999999999999999999999433 35666788999999999999999999999999998 5
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~-~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
++|+||||.+|+|.++++.. +.++|.....++.+|+.||.|||. ++||||||||+|||++..|.|||||||.|..+.
T Consensus 153 isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lv 230 (364)
T KOG0581|consen 153 ISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILV 230 (364)
T ss_pred EEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhh
Confidence 99999999999999999876 458999999999999999999995 999999999999999999999999999986332
Q ss_pred -------------CCC------ceeecccccchHHHHHHHHhCCcccCC
Q 042772 460 -------------CKP------QVFYHAHVNGFYFIMYKWLTGYFTYVP 489 (489)
Q Consensus 460 -------------~~~------~~~~~~~v~s~g~~a~e~~~G~lpY~~ 489 (489)
-.| .+-..+|+|++|..+.|+++|..||.|
T Consensus 231 nS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~ 279 (364)
T KOG0581|consen 231 NSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPP 279 (364)
T ss_pred hhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCC
Confidence 112 222356999999999999999999985
No 10
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.6e-33 Score=285.93 Aligned_cols=183 Identities=25% Similarity=0.363 Sum_probs=157.8
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC--CeE
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS--THI 381 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~ 381 (489)
..+.|+.++.||+|+||.||+|++..||+.||+|.+..... .........+|+.||++|+||||++|.+..... ..+
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si 193 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI 193 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence 34679999999999999999999999999999999976643 344556677899999999999999999988876 689
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK 461 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~ 461 (489)
|||+|||++ +|.-++... .-.|++.++..++.||+.||+|||++||+|||||.+|||||.+|.+||+|||||++....
T Consensus 194 YlVFeYMdh-DL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEEEecccc-hhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 999999965 999888764 344999999999999999999999999999999999999999999999999999987766
Q ss_pred CceeecccccchHHHHHHHHhCCcccCC
Q 042772 462 PQVFYHAHVNGFYFIMYKWLTGYFTYVP 489 (489)
Q Consensus 462 ~~~~~~~~v~s~g~~a~e~~~G~lpY~~ 489 (489)
....+...|.+++|.+||+++|..-|++
T Consensus 272 ~~~~~T~rVvTLWYRpPELLLG~t~Yg~ 299 (560)
T KOG0600|consen 272 GSAPYTSRVVTLWYRPPELLLGATSYGT 299 (560)
T ss_pred CCcccccceEEeeccChHHhcCCccccc
Confidence 5555666677777777777777766653
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.5e-33 Score=272.50 Aligned_cols=180 Identities=22% Similarity=0.323 Sum_probs=153.8
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
+.|+.+..+|+|+||.||+|+++.||+.||||.+..+. .++.-.+-..+|+.+|++++|||+|.++++|.....++||+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 46888999999999999999999999999999986442 23444456788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCCC---
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKP--- 462 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~~--- 462 (489)
|||+. ++.+-|++.+.+ ++++.+..++.|++.|+.|+|+++++||||||+||||+.+|.+||||||+|+.+..+.
T Consensus 81 E~~dh-TvL~eLe~~p~G-~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y 158 (396)
T KOG0593|consen 81 EYCDH-TVLHELERYPNG-VPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY 158 (396)
T ss_pred eecch-HHHHHHHhccCC-CCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchh
Confidence 99965 788888887765 7999999999999999999999999999999999999999999999999999877432
Q ss_pred -------------------ceeecccccchHHHHHHHHhCCcccC
Q 042772 463 -------------------QVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 463 -------------------~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
++-.+.|+|+.|++.-|+++|..+|.
T Consensus 159 TDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~P 203 (396)
T KOG0593|consen 159 TDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWP 203 (396)
T ss_pred hhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCC
Confidence 22234466777777777777776664
No 12
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-33 Score=293.21 Aligned_cols=185 Identities=39% Similarity=0.719 Sum_probs=165.4
Q ss_pred ccccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCC
Q 042772 301 EKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTST 379 (489)
Q Consensus 301 ~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~ 379 (489)
..+++++|+++++||+|+||+|++++.+.+++.||||+++|.....++.+.....|..|+.... ||+++.++.+|++..
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 4788999999999999999999999999999999999999999999999999999999998885 999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
++|+||||+.||++..+.+ .+.|++..+++|+++|+.||.|||++||||||||.+|||+|.+|++||+|||+++...
T Consensus 443 ~l~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred eEEEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC
Confidence 9999999999999544433 2559999999999999999999999999999999999999999999999999986321
Q ss_pred ---------CC-Ccee-----------ecccccchHHHHHHHHhCCcccC
Q 042772 460 ---------CK-PQVF-----------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------~~-~~~~-----------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|. |+++ ...|-|++|+.+|||++|..||.
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~ 569 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFP 569 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCC
Confidence 22 2222 22266899999999999999996
No 13
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=6.3e-32 Score=280.09 Aligned_cols=184 Identities=31% Similarity=0.522 Sum_probs=161.1
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeeccccc-ch-HHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCC
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVML-NR-NKVHRACIEREIMSLLD-HPFLPTLYASFQTST 379 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~-~~-~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~ 379 (489)
...+.|.+.+.||+|+||+|++|.+..++..||+|++++.... .. ...+.+.+|+.+++.+. ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 3456899999999999999999999999999999988765322 11 34456678999999998 999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEEecCCcccc
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD-GHVVLTDFDLSFMT 458 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~-g~vKL~DFGlS~~~ 458 (489)
.+|+|||||.||+|++++... +.+.|..++.++.|++.|++|||++||+||||||+|||++.+ +.+||+|||+|...
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~--g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNK--GRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred eEEEEEEecCCccHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 999999999999999999984 458999999999999999999999999999999999999999 99999999999855
Q ss_pred -C--------C------C-------C-ceeecccccchHHHHHHHHhCCcccC
Q 042772 459 -S--------C------K-------P-QVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 -~--------~------~-------~-~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
. + + + -.-..+|+|++|.+++.|++|.+||.
T Consensus 172 ~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~ 224 (370)
T KOG0583|consen 172 PGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFD 224 (370)
T ss_pred CCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCC
Confidence 1 1 1 1 11245699999999999999999996
No 14
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=1.4e-32 Score=275.21 Aligned_cols=182 Identities=27% Similarity=0.509 Sum_probs=166.0
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
.++|++.+.||.|.||+|-+|.....|+.||||.+.+....+..++-.+++|++||+.|+||||+.+|.+|+..+.+.||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 47899999999999999999999999999999999999988888999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----- 459 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----- 459 (489)
|||..+|+|++|+.+.. .|++.+++.++.||+.|+.|+|+++++|||||.+|||+|.|+.+||+|||+|....
T Consensus 132 MEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfL 209 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFL 209 (668)
T ss_pred EEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHH
Confidence 99999999999999874 49999999999999999999999999999999999999999999999999995322
Q ss_pred ---CC------Ccee-------ecccccchHHHHHHHHhCCcccC
Q 042772 460 ---CK------PQVF-------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---~~------~~~~-------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|. |+.. ...|.|++|+.+|.+..|.+||+
T Consensus 210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFD 254 (668)
T KOG0611|consen 210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFD 254 (668)
T ss_pred HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccC
Confidence 21 2211 22377999999999999999996
No 15
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.5e-33 Score=271.76 Aligned_cols=156 Identities=26% Similarity=0.451 Sum_probs=139.6
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeE-EEEeCCe-
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYA-SFQTSTH- 380 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~-~~~~~~~- 380 (489)
..+.+|++++.||.|+||.||++....+|..+|.|.++-.. .+....+.+..|+.+|++|+|||||++++ .|..++.
T Consensus 16 ~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~-md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~ev 94 (375)
T KOG0591|consen 16 KTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGM-MDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEV 94 (375)
T ss_pred ccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhh-ccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchh
Confidence 34568999999999999999999999999999999998544 46677888999999999999999999999 5666555
Q ss_pred EEEEEecCCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHH--CC--CeecCCCCCCEEEecCCcEEEEecCC
Q 042772 381 ICLITDFCPGGELFALLDK--QPMKIFREDSARFYAAEVVIGLEYLHC--LG--IIYRDLKPENILLQKDGHVVLTDFDL 454 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~--~~~~~l~e~~~~~i~~qI~~aL~yLH~--~g--IvHrDLKP~NILld~~g~vKL~DFGl 454 (489)
++||||||.+|+|.+.++. ...+.++|..++.++.|+|.||.++|+ .. |+||||||.||||+.+|.+||+|||+
T Consensus 95 lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL 174 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGL 174 (375)
T ss_pred hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchh
Confidence 9999999999999999875 244569999999999999999999998 45 99999999999999999999999999
Q ss_pred ccccC
Q 042772 455 SFMTS 459 (489)
Q Consensus 455 S~~~~ 459 (489)
+++..
T Consensus 175 ~r~l~ 179 (375)
T KOG0591|consen 175 GRFLS 179 (375)
T ss_pred HhHhc
Confidence 98665
No 16
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.97 E-value=4.4e-31 Score=272.79 Aligned_cols=181 Identities=35% Similarity=0.623 Sum_probs=159.7
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++++.||+|+||+||+|.++.+++.||+|++.+...........+..|+.++..++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 36899999999999999999999999999999998765444555677888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
||++||+|.+++.+. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999999999875 4489999999999999999999999999999999999999999999999999853210
Q ss_pred ---------------------------------------------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 ---------------------------------------------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---------------------------------------------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ ....+|+|++|+++++|++|..||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 111 1234589999999999999999985
No 17
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.97 E-value=5.7e-31 Score=271.43 Aligned_cols=184 Identities=28% Similarity=0.465 Sum_probs=158.9
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcE-EEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC-
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGEL-YAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST- 379 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~-vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~- 379 (489)
.+....+...+.||+|+||+||+|.+.+ +. ||+|.+......... ...|..|+.+|.+++|||||+++|++....
T Consensus 37 ~i~~~~l~~~~~iG~G~~g~V~~~~~~g--~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~ 113 (362)
T KOG0192|consen 37 EIDPDELPIEEVLGSGSFGTVYKGKWRG--TDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPG 113 (362)
T ss_pred ecChHHhhhhhhcccCCceeEEEEEeCC--ceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4455667777889999999999999995 44 999999876544443 789999999999999999999999999887
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCCCCEEEecCC-cEEEEecCCccc
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG-IIYRDLKPENILLQKDG-HVVLTDFDLSFM 457 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~g-IvHrDLKP~NILld~~g-~vKL~DFGlS~~ 457 (489)
..++||||+++|+|.+++.......++...+..++.||+.||.|||+++ ||||||||+|||++.++ ++||+|||+|+.
T Consensus 114 ~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~ 193 (362)
T KOG0192|consen 114 SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSRE 193 (362)
T ss_pred ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCcccee
Confidence 7999999999999999998843456999999999999999999999999 99999999999999998 999999999964
Q ss_pred cCC---------------CCcee--------ecccccchHHHHHHHHhCCcccC
Q 042772 458 TSC---------------KPQVF--------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 458 ~~~---------------~~~~~--------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
... +|+.+ ..+|++++|.+++|+++|..||.
T Consensus 194 ~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~ 247 (362)
T KOG0192|consen 194 KVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFE 247 (362)
T ss_pred eccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCC
Confidence 331 23322 34489999999999999999996
No 18
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=3.8e-32 Score=257.05 Aligned_cols=187 Identities=32% Similarity=0.476 Sum_probs=168.5
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeE
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 381 (489)
...+++|++.+.||.|-||.||+|+.+.++..||+|++.++........+++.+|++|-+.|+||||+++|++|.++..+
T Consensus 18 ~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ri 97 (281)
T KOG0580|consen 18 TWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRI 97 (281)
T ss_pred ccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecccee
Confidence 34577899999999999999999999999999999999988776666678899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-- 459 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-- 459 (489)
||++||.++|+|+..|..++...+++..+..+..|++.|+.|+|.++++||||||+|+|++..|.+||+|||.|...+
T Consensus 98 yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~ 177 (281)
T KOG0580|consen 98 YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSN 177 (281)
T ss_pred EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCC
Confidence 999999999999999997777889999999999999999999999999999999999999999999999999985443
Q ss_pred -----CCC------ce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 -----CKP------QV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 -----~~~------~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|.+ +. -...|+|+.|...+|++.|..||.
T Consensus 178 kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFe 223 (281)
T KOG0580|consen 178 KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFE 223 (281)
T ss_pred CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchh
Confidence 211 11 123388999999999999999996
No 19
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.97 E-value=1.3e-31 Score=277.38 Aligned_cols=179 Identities=29% Similarity=0.450 Sum_probs=160.4
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
.+|.+.+.||+|+||+||+|+.+.|.+.||+|.++|... ..+.++.+.+|++|++.++||||+.++++|++..++|+|+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 478999999999999999999999999999999987643 5567888999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
|||.| +|+.+|.... .++|+.++.++.+++.||.|||+.+|+|||+||.|||++.+|++|+||||+|+..+.
T Consensus 81 e~a~g-~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vl 157 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVL 157 (808)
T ss_pred hhhhh-hHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceee
Confidence 99965 9999998864 499999999999999999999999999999999999999999999999999974331
Q ss_pred -----CC-----------ceeecccccchHHHHHHHHhCCcccC
Q 042772 461 -----KP-----------QVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -----~~-----------~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.| .+-..+|.|++|+++||+..|..||-
T Consensus 158 tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~ 201 (808)
T KOG0597|consen 158 TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFY 201 (808)
T ss_pred eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCch
Confidence 11 12234588999999999999999983
No 20
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.8e-31 Score=279.74 Aligned_cols=181 Identities=32% Similarity=0.540 Sum_probs=163.4
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
+.|++.+.||.|+.|.|.+|++..||+.+|||++.+...........+.+|+-||+.+.||||+++|++|....++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 56999999999999999999999999999999998875555556677889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccc--------
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFM-------- 457 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~-------- 457 (489)
||++||.|+++|-+. +++++..+..++.||+.|+.|+|..+|+||||||+|+|||..+.|||+|||+|.+
T Consensus 92 Eyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLe 169 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLE 169 (786)
T ss_pred EecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCcccc
Confidence 999999999999887 4599999999999999999999999999999999999999999999999999963
Q ss_pred cCCC------Cce-------eecccccchHHHHHHHHhCCcccC
Q 042772 458 TSCK------PQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 458 ~~~~------~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
++|+ |++ -.++|||+.|++++-+++|.+||+
T Consensus 170 TSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd 213 (786)
T KOG0588|consen 170 TSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD 213 (786)
T ss_pred ccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC
Confidence 2232 222 246699999999999999999996
No 21
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.97 E-value=1.3e-30 Score=270.53 Aligned_cols=148 Identities=42% Similarity=0.761 Sum_probs=137.0
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++++.||+|+||.||+|..+.+++.||+|.+.+...........+..|+.+++.++||||++++++|.+...+|+|||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 68999999999999999999999999999999976544445566788899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcc
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSF 456 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~ 456 (489)
|+++|+|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+
T Consensus 82 ~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~ 149 (377)
T cd05629 82 FLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLST 149 (377)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccc
Confidence 99999999999765 458999999999999999999999999999999999999999999999999985
No 22
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.97 E-value=1.2e-30 Score=268.81 Aligned_cols=181 Identities=38% Similarity=0.675 Sum_probs=159.6
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++||||++++++|.+...+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36999999999999999999999999999999998654444556677888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
||+++|+|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 999999999999875 3489999999999999999999999999999999999999999999999999853210
Q ss_pred ------------------------------------------------CCc------eeecccccchHHHHHHHHhCCcc
Q 042772 461 ------------------------------------------------KPQ------VFYHAHVNGFYFIMYKWLTGYFT 486 (489)
Q Consensus 461 ------------------------------------------------~~~------~~~~~~v~s~g~~a~e~~~G~lp 486 (489)
+|+ ....+|+|++|++++++++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 011 12345999999999999999999
Q ss_pred cC
Q 042772 487 YV 488 (489)
Q Consensus 487 Y~ 488 (489)
|.
T Consensus 239 f~ 240 (364)
T cd05599 239 FC 240 (364)
T ss_pred CC
Confidence 85
No 23
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.97 E-value=2.1e-30 Score=264.24 Aligned_cols=184 Identities=36% Similarity=0.650 Sum_probs=162.3
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 382 (489)
...++|++.+.||+|+||.||+|.++.+++.||+|.+.+.........+.+..|+.+++.++||||+++++++.....+|
T Consensus 15 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 94 (329)
T PTZ00263 15 WKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVY 94 (329)
T ss_pred CCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEE
Confidence 34578999999999999999999999999999999998764444455677889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC--
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC-- 460 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~-- 460 (489)
+||||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 95 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 95 FLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred EEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence 999999999999999875 3489999999999999999999999999999999999999999999999999864331
Q ss_pred ----------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 ----------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ----------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ ....+|+|++|++++++++|..||.
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~ 216 (329)
T PTZ00263 173 FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFF 216 (329)
T ss_pred ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCC
Confidence 111 1234699999999999999999984
No 24
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.97 E-value=2.2e-30 Score=269.48 Aligned_cols=148 Identities=42% Similarity=0.705 Sum_probs=137.6
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
.|++++.||+|+||+||+|.+..+++.||+|++.+...........+..|+.+++.++||||+++++++.+...+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 58999999999999999999999999999999987655556667788999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcc
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSF 456 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~ 456 (489)
|+++|+|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++++||+|||++.
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~ 149 (381)
T cd05626 82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCT 149 (381)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCc
Confidence 99999999999875 348999999999999999999999999999999999999999999999999864
No 25
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.97 E-value=2.4e-30 Score=268.88 Aligned_cols=148 Identities=43% Similarity=0.711 Sum_probs=137.1
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|+.++.||+|+||.||+|.+..+++.||+|.+.+...........+..|+.+++.++||||++++++|.+...+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 58999999999999999999999999999999987654455567788899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcc
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSF 456 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~ 456 (489)
|+++|+|.+++.+. ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~ 149 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT 149 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCc
Confidence 99999999999775 348999999999999999999999999999999999999999999999999863
No 26
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.97 E-value=7e-31 Score=251.71 Aligned_cols=178 Identities=24% Similarity=0.381 Sum_probs=147.3
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
.+|..++.||+|.||.||+|++..||+.||||.++.....+ ..-....+|+.+|+.++||||+.++++|.+.+.+.||+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd-Gi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD-GINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccccc-CccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 46889999999999999999999999999999998764332 22345678999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCCCcee
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQVF 465 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~~~~~ 465 (489)
||++ .+|...++... ..++...+..|+.+++.||+|||++.|+||||||.|+|++++|.+||+|||+|+....+...
T Consensus 81 Efm~-tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~- 157 (318)
T KOG0659|consen 81 EFMP-TDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI- 157 (318)
T ss_pred Eecc-ccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc-
Confidence 9995 59999998753 56899999999999999999999999999999999999999999999999999977643222
Q ss_pred ecccccchHHHHHHHHhCCccc
Q 042772 466 YHAHVNGFYFIMYKWLTGYFTY 487 (489)
Q Consensus 466 ~~~~v~s~g~~a~e~~~G~lpY 487 (489)
....|.+.+|.+||+++|.--|
T Consensus 158 ~~~~V~TRWYRAPELLfGsr~Y 179 (318)
T KOG0659|consen 158 QTHQVVTRWYRAPELLFGSRQY 179 (318)
T ss_pred cccceeeeeccChHHhccchhc
Confidence 2222444444444444444444
No 27
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.97 E-value=1.8e-30 Score=269.10 Aligned_cols=148 Identities=42% Similarity=0.721 Sum_probs=136.1
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++++.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.+++.++||||+++++.|...+.+|+|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 69999999999999999999999999999999976544344456778889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcc
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSF 456 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~ 456 (489)
|+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+|.
T Consensus 82 ~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~ 149 (376)
T cd05598 82 YIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT 149 (376)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence 99999999999775 348999999999999999999999999999999999999999999999999863
No 28
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-30 Score=265.78 Aligned_cols=186 Identities=31% Similarity=0.534 Sum_probs=155.3
Q ss_pred CccccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccc-----------hHHHHHHHHHHHHHHhCCCCCc
Q 042772 300 GEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN-----------RNKVHRACIEREIMSLLDHPFL 368 (489)
Q Consensus 300 ~~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~-----------~~~~~~~~~E~~il~~l~HpnI 368 (489)
.....+++|++++.||+|.||.|.+|.+..+++.||||++++..... ....+++.+|+.||+++.||||
T Consensus 91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV 170 (576)
T KOG0585|consen 91 QDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV 170 (576)
T ss_pred ccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe
Confidence 34556789999999999999999999999999999999998754321 1124688999999999999999
Q ss_pred ceeeEEEEeC--CeEEEEEecCCCCCHHHHHhhCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC
Q 042772 369 PTLYASFQTS--THICLITDFCPGGELFALLDKQPMKI-FREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG 445 (489)
Q Consensus 369 v~l~~~~~~~--~~~~lVmEy~~ggsL~~~L~~~~~~~-l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g 445 (489)
|+|+.+..+. +.+|||+|||..|.+...- ..+. +++.+++.++..++.||+|||.+||+||||||+|+||+++|
T Consensus 171 V~LiEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 171 VKLIEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred eEEEEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCC
Confidence 9999998765 5899999999988875432 2344 89999999999999999999999999999999999999999
Q ss_pred cEEEEecCCccccC--------------------CCCcee----------ecccccchHHHHHHHHhCCcccC
Q 042772 446 HVVLTDFDLSFMTS--------------------CKPQVF----------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 446 ~vKL~DFGlS~~~~--------------------~~~~~~----------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
++||+|||.|.... .+|+.. ..-|+|++|+++|-++.|.+||-
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~ 320 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFF 320 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcc
Confidence 99999999986441 112211 22388899999999999999884
No 29
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.97 E-value=4.8e-30 Score=261.43 Aligned_cols=181 Identities=34% Similarity=0.602 Sum_probs=160.3
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++||||+++++++......|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36999999999999999999999999999999998765444455677888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~ 158 (333)
T cd05600 81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSV 158 (333)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCc
Confidence 999999999999765 3489999999999999999999999999999999999999999999999999864321
Q ss_pred -------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 -------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~ 199 (333)
T cd05600 159 VGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFS 199 (333)
T ss_pred ccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCC
Confidence 1222 234699999999999999999985
No 30
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.97 E-value=2.8e-30 Score=258.36 Aligned_cols=181 Identities=33% Similarity=0.599 Sum_probs=158.6
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++.+.||+|+||.||+|.++.+++.||+|.+.............+.+|+.+++.++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36899999999999999999999999999999997654333345567888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (291)
T cd05612 81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTL 158 (291)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccc
Confidence 999999999999875 3489999999999999999999999999999999999999999999999999864321
Q ss_pred -------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 -------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ ....+|+|++|++++++++|..||.
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~ 199 (291)
T cd05612 159 CGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFF 199 (291)
T ss_pred cCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 111 1234599999999999999999985
No 31
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.97 E-value=4.1e-30 Score=266.97 Aligned_cols=183 Identities=30% Similarity=0.561 Sum_probs=160.5
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 382 (489)
...++|++.+.||+|+||.||+|.++.+++.||+|++.+...........+..|+.+++.++||||+++++++..+..+|
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 34568999999999999999999999999999999997654444445566788999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC---
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS--- 459 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~--- 459 (489)
+||||+++|+|.+++... .+++..+..++.||+.||.|||++||+||||||+|||+++++.+||+|||+|....
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 196 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence 999999999999999764 37899999999999999999999999999999999999999999999999986431
Q ss_pred -------------CCCc----------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 -------------CKPQ----------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 -------------~~~~----------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+ ....+|+|++|++++++++|..||.
T Consensus 197 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~ 248 (370)
T cd05621 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY 248 (370)
T ss_pred ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCC
Confidence 1122 1235799999999999999999985
No 32
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.97 E-value=5.5e-30 Score=262.97 Aligned_cols=185 Identities=36% Similarity=0.628 Sum_probs=161.4
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCC-cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCe
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAG-ELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTH 380 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg-~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 380 (489)
.+..++|++.+.||+|+||.||+|.++.++ ..||+|.+.+...........+..|+.+++.++||||+++++++.+...
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~ 105 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESY 105 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCE
Confidence 345678999999999999999999977655 7899999976654445566778899999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC 460 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~ 460 (489)
+|+||||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999999999875 3489999999999999999999999999999999999999999999999999864321
Q ss_pred ------------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 ------------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ------------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ ....+|+|++|+++++|++|..||.
T Consensus 184 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~ 229 (340)
T PTZ00426 184 RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFY 229 (340)
T ss_pred CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCC
Confidence 111 1234599999999999999999985
No 33
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.97 E-value=7.7e-30 Score=254.19 Aligned_cols=181 Identities=31% Similarity=0.526 Sum_probs=157.5
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEec
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDF 387 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy 387 (489)
|+..+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 78889999999999999999999999999999765443344445677899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-------
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------- 460 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------- 460 (489)
+++|+|.+++.......+++..+..++.|++.||.|||++||+||||||+|||+++++.+||+|||++.....
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGR 161 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCC
Confidence 9999999888765444589999999999999999999999999999999999999999999999999864321
Q ss_pred -------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 -------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 162 ~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~ 202 (285)
T cd05631 162 VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFR 202 (285)
T ss_pred CCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCC
Confidence 1221 234599999999999999999985
No 34
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.97 E-value=7.9e-30 Score=259.16 Aligned_cols=175 Identities=39% Similarity=0.698 Sum_probs=154.1
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGG 391 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~gg 391 (489)
+.||+|+||.||+|.++.+|+.||+|++.+...........+..|+.+++.++||||+++++++.....+|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998765445556677888999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------------
Q 042772 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------------ 459 (489)
Q Consensus 392 sL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------------ 459 (489)
+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt 158 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecC
Confidence 999999875 458999999999999999999999999999999999999999999999999986321
Q ss_pred ---CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ---CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 196 (323)
T cd05571 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196 (323)
T ss_pred ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCC
Confidence 11222 234699999999999999999984
No 35
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=293.38 Aligned_cols=185 Identities=34% Similarity=0.567 Sum_probs=167.5
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeE
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 381 (489)
.+..++|.++++||+|+||.|.+++++.|++.||+|++++..+..+.....|+.|..+|..-+.+-|+.++-+|+++.++
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL 150 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence 44567899999999999999999999999999999999999888888999999999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-- 459 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-- 459 (489)
|+||||++||+|..+|.+.. .++++.+++|++.|+.||.-||+.|+|||||||+|||||..|+|||+|||.+-...
T Consensus 151 YlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCC
Confidence 99999999999999998864 59999999999999999999999999999999999999999999999999863222
Q ss_pred ---------CCCceee----------------cccccchHHHHHHHHhCCcccC
Q 042772 460 ---------CKPQVFY----------------HAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------~~~~~~~----------------~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+.|.+++ ..|-|+.|+++|||+.|.+||-
T Consensus 229 G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 229 GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 2233332 3367899999999999999983
No 36
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97 E-value=4.4e-30 Score=264.87 Aligned_cols=181 Identities=35% Similarity=0.631 Sum_probs=158.9
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++++.||+|+||.||+|..+.+++.||+|++.+...........+..|+.++..++||||+++++.+.+...+|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36899999999999999999999999999999998654444556678888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
||++||+|.+++.+. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999999999775 3489999999999999999999999999999999999999999999999998753210
Q ss_pred ---------------------------------------------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 ---------------------------------------------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---------------------------------------------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ ....+|+|++|+++++|++|..||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence 111 1234589999999999999999985
No 37
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.97 E-value=9e-30 Score=264.37 Aligned_cols=184 Identities=31% Similarity=0.564 Sum_probs=161.4
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeE
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 381 (489)
.+..++|++.+.||+|+||.||+|.++.+++.||+|.+.+...........+..|+.+++.++||||+++++++.....+
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 45567899999999999999999999999999999999765444445556778899999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-- 459 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-- 459 (489)
|+||||+++|+|.+++... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 119 ~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcC
Confidence 9999999999999999763 37899999999999999999999999999999999999999999999999985322
Q ss_pred --------------CCCc----------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 --------------CKPQ----------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --------------~~~~----------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+ ....+|+|++|+++++|++|..||.
T Consensus 196 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~ 248 (371)
T cd05622 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 248 (371)
T ss_pred CcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCC
Confidence 1122 1235699999999999999999985
No 38
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-30 Score=268.18 Aligned_cols=185 Identities=26% Similarity=0.384 Sum_probs=160.4
Q ss_pred CCccccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC
Q 042772 299 SGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS 378 (489)
Q Consensus 299 ~~~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 378 (489)
....+....+++++.||+|.||.||+|.+++ ...||+|.++...+.. +.|.+|+++|++|+|+|||++++++..+
T Consensus 199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~----~~f~~Ea~iMk~L~H~~lV~l~gV~~~~ 273 (468)
T KOG0197|consen 199 DPWEIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSP----EAFLREAQIMKKLRHEKLVKLYGVCTKQ 273 (468)
T ss_pred CCeeecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccCh----hHHHHHHHHHHhCcccCeEEEEEEEecC
Confidence 3445666778999999999999999999996 3468999997654432 4566899999999999999999999998
Q ss_pred CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcccc
Q 042772 379 THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~ 458 (489)
..+||||||++.|+|.++|.......+.......++.|||.||+||+++++|||||..+||||++++.+||+|||+|+..
T Consensus 274 ~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~ 353 (468)
T KOG0197|consen 274 EPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLI 353 (468)
T ss_pred CceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEccccccccc
Confidence 89999999999999999999866667999999999999999999999999999999999999999999999999999953
Q ss_pred CC----------------CCc------eeecccccchHHHHHHH-HhCCcccC
Q 042772 459 SC----------------KPQ------VFYHAHVNGFYFIMYKW-LTGYFTYV 488 (489)
Q Consensus 459 ~~----------------~~~------~~~~~~v~s~g~~a~e~-~~G~lpY~ 488 (489)
.. +|+ ....+|||+||..++|+ ..|..||.
T Consensus 354 ~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~ 406 (468)
T KOG0197|consen 354 GDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYP 406 (468)
T ss_pred CCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCC
Confidence 31 111 12456999999999998 58999986
No 39
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.97 E-value=8.6e-30 Score=264.33 Aligned_cols=184 Identities=32% Similarity=0.549 Sum_probs=161.1
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeE
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 381 (489)
.+..++|++.+.||+|+||.||+|.++.+++.||+|.+++...........+..|+.+++.++||||+++++++.+...+
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 45567899999999999999999999999999999999765444445556678899999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC- 460 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~- 460 (489)
|+||||+++|+|.+++... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999999998763 378999999999999999999999999999999999999999999999999854321
Q ss_pred ---------------CCce----------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ---------------KPQV----------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---------------~~~~----------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 196 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~ 248 (370)
T cd05596 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 248 (370)
T ss_pred CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcC
Confidence 1221 134699999999999999999985
No 40
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-30 Score=260.45 Aligned_cols=179 Identities=31% Similarity=0.457 Sum_probs=154.9
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC--eEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST--HICL 383 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~l 383 (489)
.+|...+.||+|+||.||++.+..+|...|+|.+... +....+.+.+|+.+|++++|||||++++...... .+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~---~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELE---DSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecc---cchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 4588899999999999999999999999999998765 1122677889999999999999999999754444 6999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEEecCCccccC---
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQK-DGHVVLTDFDLSFMTS--- 459 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~-~g~vKL~DFGlS~~~~--- 459 (489)
+|||+++|+|.+++.+... .+++..++.++.|++.||.|||++|++||||||+|||++. ++.+||+|||++....
T Consensus 94 ~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred eeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999999998765 6999999999999999999999999999999999999999 7999999999886332
Q ss_pred ---------------CCCceee-------cccccchHHHHHHHHhCCcccC
Q 042772 460 ---------------CKPQVFY-------HAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------------~~~~~~~-------~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
-.|+++. .+|+|++|+++-||++|..||.
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~ 223 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWS 223 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcch
Confidence 1233332 5688999999999999998885
No 41
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.97 E-value=1.7e-30 Score=255.73 Aligned_cols=180 Identities=21% Similarity=0.287 Sum_probs=145.6
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC--CeE
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS--THI 381 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~ 381 (489)
+.++|+.++.|++|+||.||+|.++.|++.||+|.++..... ...--...+|+.+|.+++|||||.+-.+.... +.+
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek-~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEK-EGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccccc-CCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 346799999999999999999999999999999999765421 11122356799999999999999999888754 479
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK 461 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~ 461 (489)
|+|||||++ +|.++++..+ .+|...++..++.|++.|++|||.+.|+||||||+|+|++..|.+||+|||+|+....+
T Consensus 153 y~VMe~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred eeeHHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 999999965 9999999875 56999999999999999999999999999999999999999999999999999977754
Q ss_pred CceeecccccchHHHHHHHHhCCccc
Q 042772 462 PQVFYHAHVNGFYFIMYKWLTGYFTY 487 (489)
Q Consensus 462 ~~~~~~~~v~s~g~~a~e~~~G~lpY 487 (489)
... +.+-|.+++|.+||+++|...|
T Consensus 231 ~k~-~T~lVVTLWYRaPELLLG~~ty 255 (419)
T KOG0663|consen 231 LKP-YTPLVVTLWYRAPELLLGAKTY 255 (419)
T ss_pred ccc-CcceEEEeeecCHHHhcCCccc
Confidence 322 2222334444444444444433
No 42
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-30 Score=254.43 Aligned_cols=185 Identities=39% Similarity=0.718 Sum_probs=167.7
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeE
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 381 (489)
.+..++|..++.||+|.||+|-+|+.+.+++.||||++++.....++.+.....|-.+|+..+||++..+-.+|++..++
T Consensus 164 kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drl 243 (516)
T KOG0690|consen 164 KVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRL 243 (516)
T ss_pred eeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceE
Confidence 45678999999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccc----
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFM---- 457 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~---- 457 (489)
|+||||..||.|+-+|.+. ..++++.++++-.+|+.||.|||+++||+||||.+|+|+|++|+|||+|||++..
T Consensus 244 CFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~ 321 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY 321 (516)
T ss_pred EEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccc
Confidence 9999999999999999875 5599999999999999999999999999999999999999999999999999852
Q ss_pred -----cCC-CCceeec-----------ccccchHHHHHHHHhCCcccC
Q 042772 458 -----TSC-KPQVFYH-----------AHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 458 -----~~~-~~~~~~~-----------~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+.| .|++..+ .+-|+.|+.+|||+||.+||-
T Consensus 322 g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFy 369 (516)
T KOG0690|consen 322 GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFY 369 (516)
T ss_pred cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccc
Confidence 112 2333332 356899999999999999984
No 43
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97 E-value=2.1e-29 Score=257.11 Aligned_cols=182 Identities=33% Similarity=0.574 Sum_probs=159.1
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++++.||+|+||.||++.+..+++.||+|++.+...........+..|+.++..++||||+++++++....++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 36999999999999999999999999999999998654444555677888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
||+++|+|.+++.+.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred ecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence 9999999999997642 3489999999999999999999999999999999999999999999999999753211
Q ss_pred -----------CCcee-----------ecccccchHHHHHHHHhCCcccC
Q 042772 461 -----------KPQVF-----------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -----------~~~~~-----------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+.+ ..+|+|++|++++++++|..||.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~ 209 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFY 209 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCC
Confidence 12211 24699999999999999999984
No 44
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.5e-31 Score=268.01 Aligned_cols=155 Identities=28% Similarity=0.458 Sum_probs=138.6
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCC-eE
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTST-HI 381 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~-~~ 381 (489)
..++|.+++.||.|+||.||+|..+.+|..||||.|++.... -++. .-.+|+..|++|+ ||||+++.+++.+.. .+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~-~nLREvksL~kln~hpniikL~Evi~d~~~~L 85 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL 85 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHH-HHHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence 346899999999999999999999999999999999876543 2222 2356999999998 999999999998877 99
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK 461 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~ 461 (489)
|+||||| ..+|+++++.+ .+.|++..++.|+.||+.||+|+|++|+.||||||+|||+..+..|||+|||+||.....
T Consensus 86 ~fVfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk 163 (538)
T KOG0661|consen 86 YFVFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK 163 (538)
T ss_pred eeeHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccC
Confidence 9999999 56999999988 678999999999999999999999999999999999999998889999999999976654
Q ss_pred C
Q 042772 462 P 462 (489)
Q Consensus 462 ~ 462 (489)
|
T Consensus 164 p 164 (538)
T KOG0661|consen 164 P 164 (538)
T ss_pred C
Confidence 3
No 45
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.97 E-value=8.6e-30 Score=260.48 Aligned_cols=181 Identities=38% Similarity=0.678 Sum_probs=160.5
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36999999999999999999999999999999998765444456677889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCCC---
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKP--- 462 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~~--- 462 (489)
||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 999999999999876 458999999999999999999999999999999999999999999999999986432111
Q ss_pred -----------------------------------------c------eeecccccchHHHHHHHHhCCcccC
Q 042772 463 -----------------------------------------Q------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 463 -----------------------------------------~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+ ....+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~ 231 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFY 231 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCC
Confidence 1 1234589999999999999999985
No 46
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-29 Score=256.50 Aligned_cols=188 Identities=26% Similarity=0.359 Sum_probs=165.8
Q ss_pred CCccccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC
Q 042772 299 SGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS 378 (489)
Q Consensus 299 ~~~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 378 (489)
.+..+..++|++.+.||.|..++||+|....++..||||+++..... ..++.+.+|++.|+.++||||++++.+|..+
T Consensus 19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~--~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~ 96 (516)
T KOG0582|consen 19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN--NDLDALRKEVQTMSLIDHPNIVTYHCSFVVD 96 (516)
T ss_pred ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh--hhHHHHHHHHHHhhhcCCCCcceEEEEEEec
Confidence 34456678899999999999999999999999999999999876543 3488899999999999999999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcccc
Q 042772 379 THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~ 458 (489)
..+|+||.||.+|++.++++..-...++|..+..++.+++.||.|||++|-||||||+.||||+.+|.|||+|||.+..+
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l 176 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASL 176 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeee
Confidence 99999999999999999999875555999999999999999999999999999999999999999999999999987422
Q ss_pred C-------------CCCcee--------------ecccccchHHHHHHHHhCCcccC
Q 042772 459 S-------------CKPQVF--------------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 ~-------------~~~~~~--------------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
. .....| ..+|+|++|.++.|++.|..||.
T Consensus 177 ~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~ 233 (516)
T KOG0582|consen 177 FDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFS 233 (516)
T ss_pred cccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcc
Confidence 1 111122 23588999999999999999996
No 47
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.96 E-value=3.8e-30 Score=269.19 Aligned_cols=186 Identities=24% Similarity=0.345 Sum_probs=163.4
Q ss_pred cCCCccccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEE
Q 042772 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQ 376 (489)
Q Consensus 297 ~~~~~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 376 (489)
....+++..+.+.+.+.||+|+||+||+|.+.++ ||||+++..... ...++.|++|+.++++-+|-||+-+.|++.
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt-~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~ 458 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPT-PEQLQAFKNEVAVLKKTRHENILLFMGACM 458 (678)
T ss_pred cccccccCHHHhhccceeccccccceeecccccc---eEEEEEecCCCC-HHHHHHHHHHHHHHhhcchhhheeeehhhc
Confidence 3345667778889999999999999999999974 999999876554 458899999999999999999999999998
Q ss_pred eCCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcc
Q 042772 377 TSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSF 456 (489)
Q Consensus 377 ~~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~ 456 (489)
.+.. .||+-+|+|-+|+.+|+.... .|.......|+.|++.||.|||.++|||||||..|||+.+++.|||+|||++.
T Consensus 459 ~p~~-AIiTqwCeGsSLY~hlHv~et-kfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLat 536 (678)
T KOG0193|consen 459 NPPL-AIITQWCEGSSLYTHLHVQET-KFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLAT 536 (678)
T ss_pred CCce-eeeehhccCchhhhhccchhh-hhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEeccccee
Confidence 8876 999999999999999987653 48999999999999999999999999999999999999999999999999986
Q ss_pred ccC--------------------------CCCceeecccccchHHHHHHHHhCCcccC
Q 042772 457 MTS--------------------------CKPQVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 457 ~~~--------------------------~~~~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+.. +...+...+||++||..+||+++|++||.
T Consensus 537 vk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys 594 (678)
T KOG0193|consen 537 VKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS 594 (678)
T ss_pred eeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC
Confidence 432 11223346699999999999999999996
No 48
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.96 E-value=3.1e-29 Score=255.67 Aligned_cols=175 Identities=39% Similarity=0.697 Sum_probs=154.1
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGG 391 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~gg 391 (489)
+.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.+++.++||||+++++++.....+|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998765545556678888999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------------
Q 042772 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------------ 459 (489)
Q Consensus 392 sL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------------ 459 (489)
+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 158 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT 158 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCC
Confidence 999998765 348999999999999999999999999999999999999999999999999986321
Q ss_pred ---CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ---CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~ 196 (328)
T cd05593 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196 (328)
T ss_pred cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCC
Confidence 11222 234599999999999999999984
No 49
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.96 E-value=2.5e-29 Score=255.66 Aligned_cols=175 Identities=38% Similarity=0.697 Sum_probs=153.5
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGG 391 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~gg 391 (489)
+.||+|+||.||++.++.+|+.||+|.+.+...........+..|+.+++.++||||++++++|.....+|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998765444556677788999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------------
Q 042772 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------------ 459 (489)
Q Consensus 392 sL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------------ 459 (489)
+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 158 (323)
T cd05595 81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCC
Confidence 999998765 348999999999999999999999999999999999999999999999999875321
Q ss_pred ---CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ---CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~ 196 (323)
T cd05595 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196 (323)
T ss_pred cCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCC
Confidence 11222 234599999999999999999984
No 50
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.96 E-value=3.6e-29 Score=252.94 Aligned_cols=173 Identities=35% Similarity=0.604 Sum_probs=152.7
Q ss_pred cCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCCCH
Q 042772 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGEL 393 (489)
Q Consensus 314 LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ggsL 393 (489)
||+|+||.||+|.+..+++.||+|.+.+...........+..|+.+++.++||||+++++++......|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 79999999999999999999999999865544555667788899999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--------------
Q 042772 394 FALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-------------- 459 (489)
Q Consensus 394 ~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-------------- 459 (489)
.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~ 158 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPE 158 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcc
Confidence 9999775 348999999999999999999999999999999999999999999999999986421
Q ss_pred -CCCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 -CKPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 -~~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+ ....+|+|++|++++++++|..||.
T Consensus 159 y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~ 194 (312)
T cd05585 159 YLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFY 194 (312)
T ss_pred cCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcC
Confidence 0111 1234699999999999999999984
No 51
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.96 E-value=2.5e-29 Score=256.50 Aligned_cols=182 Identities=32% Similarity=0.518 Sum_probs=158.8
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++.+.||+|+||.||++.++.+++.||+|.+.+...........+..|..++..++||||+.+++++...+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36999999999999999999999999999999997654444455666788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
||++||+|.+++.... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 159 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ 159 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence 9999999999998642 348999999999999999999999999999999999999999999999999975321
Q ss_pred ----------CCCce-----------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----------CKPQV-----------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----------~~~~~-----------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~ 209 (331)
T cd05624 160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 209 (331)
T ss_pred eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCcc
Confidence 11221 124599999999999999999985
No 52
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.96 E-value=1.4e-29 Score=252.27 Aligned_cols=153 Identities=25% Similarity=0.410 Sum_probs=134.6
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCC-cceeeEEEEeCC----
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF-LPTLYASFQTST---- 379 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~l~~~~~~~~---- 379 (489)
...|..++.||+|+||+||+|..+.+|+.||+|.+.-.... ...-....+|+.+++.++|+| |+.+++++.+.+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 34688899999999999999999999999999999765331 112245678999999999999 999999998877
Q ss_pred --eEEEEEecCCCCCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCc
Q 042772 380 --HICLITDFCPGGELFALLDKQPM--KIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455 (489)
Q Consensus 380 --~~~lVmEy~~ggsL~~~L~~~~~--~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS 455 (489)
.+++|+||+ ..+|..+++..+. ..++...++.++.||+.||+|||+++|+||||||+||||+++|.+||+|||+|
T Consensus 89 ~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 89 IGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred cceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence 899999999 5699999998653 24788999999999999999999999999999999999999999999999999
Q ss_pred cccC
Q 042772 456 FMTS 459 (489)
Q Consensus 456 ~~~~ 459 (489)
+...
T Consensus 168 ra~~ 171 (323)
T KOG0594|consen 168 RAFS 171 (323)
T ss_pred HHhc
Confidence 8554
No 53
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.96 E-value=2.2e-29 Score=256.08 Aligned_cols=182 Identities=34% Similarity=0.614 Sum_probs=159.6
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|.+.+.||+|+||.||+|.++.+++.||+|.+++...........+..|+.+++.++||||+++++++.....+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36899999999999999999999999999999998765444556677888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
||+++|+|.+++.... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence 9999999999998753 3489999999999999999999999999999999999999999999999999864321
Q ss_pred -----------CCce------------eecccccchHHHHHHHHhCCcccC
Q 042772 461 -----------KPQV------------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -----------~~~~------------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 210 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFH 210 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCC
Confidence 1221 134699999999999999999984
No 54
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.96 E-value=6.6e-29 Score=252.32 Aligned_cols=180 Identities=34% Similarity=0.621 Sum_probs=155.8
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCC-CcceeeEEEEeCCeEEEEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHP-FLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hp-nIv~l~~~~~~~~~~~lVm 385 (489)
+|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|..++..+.|+ +|+.+++++...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 488999999999999999999999999999999876544455567788899999999764 6888999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTT 158 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCce
Confidence 999999999999765 348999999999999999999999999999999999999999999999999875311
Q ss_pred ---------CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ---------CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~ 202 (324)
T cd05587 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD 202 (324)
T ss_pred eeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCC
Confidence 11221 134599999999999999999985
No 55
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.96 E-value=4e-29 Score=254.98 Aligned_cols=182 Identities=33% Similarity=0.532 Sum_probs=158.4
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++.+.||+|+||.||++.++.+++.+|+|++.+...........+..|+.++..++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36899999999999999999999999999999997654444445566788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
||+++|+|.+++.+.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~ 159 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 159 (332)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence 9999999999997642 348999999999999999999999999999999999999999999999999875321
Q ss_pred ----------CCCce-----------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----------CKPQV-----------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----------~~~~~-----------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~ 209 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFY 209 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCC
Confidence 11222 235699999999999999999985
No 56
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.96 E-value=9.1e-29 Score=246.44 Aligned_cols=182 Identities=32% Similarity=0.534 Sum_probs=158.1
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
.|+..+.||+|+||.||++.+..+++.||+|.+.............+.+|+.+++.++||||+++++++.....+++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 37889999999999999999999999999999976544334444567789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------ 460 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------ 460 (489)
|+++|+|.+++.......+++..+..++.|++.||.|||++|++||||||+||++++++.++|+|||++.....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG 160 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence 99999999988765445689999999999999999999999999999999999999999999999999865321
Q ss_pred --------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 --------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 --------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~ 202 (285)
T cd05605 161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFR 202 (285)
T ss_pred ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCC
Confidence 1221 124599999999999999999985
No 57
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.96 E-value=5.4e-29 Score=253.05 Aligned_cols=175 Identities=39% Similarity=0.693 Sum_probs=152.5
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGG 391 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~gg 391 (489)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++||||+++++++.....+|+||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998765545555677788999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecCCccccC-----------
Q 042772 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----------- 459 (489)
Q Consensus 392 sL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~-~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----------- 459 (489)
+|..++... ..+++..+..++.||+.||.|||+ +||+||||||+|||++.++.+||+|||++....
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (325)
T cd05594 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG 158 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccC
Confidence 999998765 348999999999999999999997 799999999999999999999999999875321
Q ss_pred ----CCCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 ----CKPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----~~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+ ....+|+|++|++++++++|..||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~ 197 (325)
T cd05594 159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 197 (325)
T ss_pred CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCC
Confidence 0111 1234699999999999999999984
No 58
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.96 E-value=9.8e-29 Score=251.91 Aligned_cols=175 Identities=31% Similarity=0.606 Sum_probs=153.0
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
+.||+|+||.||+|.++.+++.||+|++++...........+..|..++..+ +||||++++++|.....+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876554555567788899999888 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----------- 459 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----------- 459 (489)
|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCG 158 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccC
Confidence 9999998765 448999999999999999999999999999999999999999999999999985311
Q ss_pred ----CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~ 197 (329)
T cd05588 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred CccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcc
Confidence 01111 134699999999999999999984
No 59
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.96 E-value=9.6e-29 Score=251.00 Aligned_cols=180 Identities=34% Similarity=0.623 Sum_probs=155.6
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeEEEEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lVm 385 (489)
+|++.+.||+|+||.||+|.+..+++.||+|.+.+..............|..++..+ .||+|+.+++++.....+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 488999999999999999999999999999999876544444556677788888877 5899999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~ 158 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTT 158 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcc
Confidence 999999999998765 348999999999999999999999999999999999999999999999999986321
Q ss_pred ---------CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ---------CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~ 202 (323)
T cd05616 159 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 202 (323)
T ss_pred ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCC
Confidence 11211 234599999999999999999985
No 60
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.96 E-value=1.1e-28 Score=250.31 Aligned_cols=175 Identities=37% Similarity=0.637 Sum_probs=151.9
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
+.||+|+||.||+|.++.+++.||+|++.+...........+..|..++..+ +||||+++++++.....+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4689999999999999999999999999876544455566777899998866 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----------- 459 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----------- 459 (489)
|+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05591 81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCG 158 (321)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCcccccccc
Confidence 9999998765 348999999999999999999999999999999999999999999999999886321
Q ss_pred ----CCCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 ----CKPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----~~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+ ....+|+|++|++++++++|..||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~ 197 (321)
T cd05591 159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFE 197 (321)
T ss_pred CccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCC
Confidence 0111 1234699999999999999999985
No 61
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.96 E-value=8.5e-29 Score=251.51 Aligned_cols=178 Identities=38% Similarity=0.663 Sum_probs=152.7
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHH---HhCCCCCcceeeEEEEeCCeEEEE
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIM---SLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il---~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
|++++.||+|+||.||+|.+..+++.||+|.+++.........+.+..|+.++ +.++||||+++++++.....+|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 67889999999999999999999999999999866444444556677777665 456799999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----- 459 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----- 459 (489)
|||+++++|..++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDR 157 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCc
Confidence 999999999988865 348999999999999999999999999999999999999999999999999875321
Q ss_pred ----------CCCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 ----------CKPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----------~~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+ ....+|+|++|++++++++|..||.
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~ 202 (324)
T cd05589 158 TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFP 202 (324)
T ss_pred ccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCC
Confidence 0122 1234699999999999999999985
No 62
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.96 E-value=1.2e-28 Score=249.87 Aligned_cols=175 Identities=39% Similarity=0.708 Sum_probs=150.0
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
+.||+|+||.||+|.+..+++.||+|.+++..............|..++..+ +||||+++++++.....+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999876544444555666777777654 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----------- 459 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----------- 459 (489)
|+|..++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~g 158 (316)
T cd05592 81 GDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCG 158 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccC
Confidence 9999999775 348999999999999999999999999999999999999999999999999986321
Q ss_pred ----CCCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 ----CKPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----~~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+ ....+|+|++|++++++++|..||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~ 197 (316)
T cd05592 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFH 197 (316)
T ss_pred CccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCC
Confidence 0111 1234699999999999999999985
No 63
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.96 E-value=1.5e-28 Score=250.69 Aligned_cols=175 Identities=31% Similarity=0.597 Sum_probs=152.7
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
+.||+|+||.||+|.++.+++.||+|++.+...........+..|..++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876555555667788899888776 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----------- 459 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----------- 459 (489)
|+|..++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG 158 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccC
Confidence 9999988765 348999999999999999999999999999999999999999999999999986321
Q ss_pred ----CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (329)
T cd05618 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred CccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence 01111 235699999999999999999983
No 64
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.96 E-value=1e-28 Score=254.05 Aligned_cols=179 Identities=25% Similarity=0.428 Sum_probs=153.7
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeE
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 381 (489)
...+.+|+.++.||+|+||.||+|.+..+++.||+|++.... .......+.+|+++++.++||||+++++++...+.+
T Consensus 70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 147 (353)
T PLN00034 70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEI 147 (353)
T ss_pred CCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeE
Confidence 345678999999999999999999999999999999986542 234456788999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-- 459 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-- 459 (489)
++||||+++|+|.+. ....+..+..++.||+.||.|||++||+||||||+|||+++++.+||+|||++....
T Consensus 148 ~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 148 QVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred EEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 999999999998643 225678888999999999999999999999999999999999999999999986422
Q ss_pred -------------CCCcee-----------ecccccchHHHHHHHHhCCcccC
Q 042772 460 -------------CKPQVF-----------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 -------------~~~~~~-----------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
..|+.+ ..+|+|++|++++++++|..||.
T Consensus 222 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~ 274 (353)
T PLN00034 222 MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFG 274 (353)
T ss_pred cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence 123322 24699999999999999999984
No 65
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.96 E-value=9.8e-29 Score=248.14 Aligned_cols=179 Identities=23% Similarity=0.376 Sum_probs=153.2
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++.+.||+|+||.||+|.++.+++.||+|++..... ......+.+|+.+++.++||||+++++++......++||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 579999999999999999999999999999999875432 222345677999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
||+ +++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 83 e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 160 (303)
T cd07869 83 EYV-HTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTY 160 (303)
T ss_pred ECC-CcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccC
Confidence 999 468988887653 348899999999999999999999999999999999999999999999999985321
Q ss_pred ---------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ---------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 205 (303)
T cd07869 161 SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFP 205 (303)
T ss_pred CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 12222 223599999999999999999984
No 66
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.96 E-value=1.4e-28 Score=250.24 Aligned_cols=180 Identities=33% Similarity=0.616 Sum_probs=155.2
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCCeEEEEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lVm 385 (489)
+|+..+.||+|+||.||+|.++.+++.||+|++.+...........+..|..++..+. ||+|+++++++.....+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4788899999999999999999999999999998764444455667788999988886 578889999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~ 158 (323)
T cd05615 81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTT 158 (323)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccc
Confidence 999999999999775 348999999999999999999999999999999999999999999999999986321
Q ss_pred ---------CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ---------CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~ 202 (323)
T cd05615 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 202 (323)
T ss_pred cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCC
Confidence 01111 134599999999999999999985
No 67
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.96 E-value=9.3e-29 Score=246.76 Aligned_cols=180 Identities=24% Similarity=0.351 Sum_probs=154.0
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
+++|++.+.||.|+||.||+|.+..+++.||+|.++.... ......+.+|+.+++.++||||+++++++......++|
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 4679999999999999999999999999999999865421 22234567899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----- 459 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----- 459 (489)
|||++ ++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 82 ~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~ 159 (288)
T cd07871 82 FEYLD-SDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKT 159 (288)
T ss_pred EeCCC-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCcc
Confidence 99996 59999987653 347899999999999999999999999999999999999999999999999985321
Q ss_pred ----------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~ 205 (288)
T cd07871 160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFP 205 (288)
T ss_pred ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 11222 224589999999999999999984
No 68
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.96 E-value=1.5e-28 Score=249.54 Aligned_cols=175 Identities=38% Similarity=0.653 Sum_probs=151.4
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
+.||+|+||.||+|.++.+++.||+|++.+...........+..|..++..+ +||||+++++++.....+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999876544445566777888888876 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----------- 459 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----------- 459 (489)
|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (320)
T cd05590 81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCG 158 (320)
T ss_pred chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccccc
Confidence 9999998775 348999999999999999999999999999999999999999999999999876321
Q ss_pred ----CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (320)
T cd05590 159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFE 197 (320)
T ss_pred CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCC
Confidence 01111 124599999999999999999985
No 69
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.96 E-value=1.1e-28 Score=251.60 Aligned_cols=185 Identities=22% Similarity=0.307 Sum_probs=152.1
Q ss_pred cccccCcccccccCCCCceEEEEEEEc-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEE
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQ-----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASF 375 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~-----~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~ 375 (489)
.+..++|++.+.||+|+||.||+|.+. .+++.||+|.+.... .......+..|+.++..+ +||||+++++++
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGAC 80 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence 345578999999999999999999853 345789999986432 233456788899999999 899999999988
Q ss_pred EeC-CeEEEEEecCCCCCHHHHHhhCC-----------------------------------------------------
Q 042772 376 QTS-THICLITDFCPGGELFALLDKQP----------------------------------------------------- 401 (489)
Q Consensus 376 ~~~-~~~~lVmEy~~ggsL~~~L~~~~----------------------------------------------------- 401 (489)
... ..++++|||+++|+|.+++....
T Consensus 81 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 81 TKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred cCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 764 46899999999999999997532
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC---------------
Q 042772 402 -------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS--------------- 459 (489)
Q Consensus 402 -------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~--------------- 459 (489)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~ 240 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPL 240 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCc
Confidence 1247788889999999999999999999999999999999999999999999986421
Q ss_pred --CCCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 460 --CKPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 460 --~~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.+|+. ...+|+|++|++++|+++ |..||.
T Consensus 241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~ 278 (338)
T cd05102 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYP 278 (338)
T ss_pred cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCC
Confidence 11221 234599999999999986 999985
No 70
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-28 Score=255.57 Aligned_cols=181 Identities=29% Similarity=0.470 Sum_probs=161.2
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCCeEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~l 383 (489)
...|.+.+.||.|.||.||+|..+.||+.+|+|.+++...........+.+|+++|+++. ||||+.++++|++...+++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 356999999999999999999999999999999999887766656778899999999998 9999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC----CcEEEEecCCccccC
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD----GHVVLTDFDLSFMTS 459 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~----g~vKL~DFGlS~~~~ 459 (489)
|||+|.||+|++.+... . +++..+..++.|++.++.|||+.||+||||||+|+|+... +.+|++|||+|....
T Consensus 114 vmEL~~GGeLfd~i~~~--~-~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK--H-YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEEecCCchHHHHHHHc--c-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 99999999999999887 3 8999999999999999999999999999999999999633 579999999996443
Q ss_pred C--------------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 C--------------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ~--------------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
. +|+ +....|+|+.|.++|.+++|..||.
T Consensus 191 ~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~ 239 (382)
T KOG0032|consen 191 PGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFW 239 (382)
T ss_pred CCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCc
Confidence 2 122 2234489999999999999999985
No 71
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.96 E-value=2.2e-28 Score=248.41 Aligned_cols=175 Identities=41% Similarity=0.658 Sum_probs=148.7
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHH-HHHhCCCCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE-IMSLLDHPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~-il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
+.||+|+||+||+|.++.+|+.||+|++.+...........+..|.. +++.++||||+++++++.....+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46899999999999999999999999997654433444455555655 46778999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----------- 459 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----------- 459 (489)
|+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCG 158 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccC
Confidence 9999999775 348999999999999999999999999999999999999999999999999885321
Q ss_pred ----CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~ 197 (323)
T cd05575 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFY 197 (323)
T ss_pred ChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCC
Confidence 11221 234699999999999999999984
No 72
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.96 E-value=2.1e-28 Score=248.09 Aligned_cols=175 Identities=41% Similarity=0.659 Sum_probs=148.2
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHH-HHHhCCCCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE-IMSLLDHPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~-il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|.. +++.++||||+++++++.....+|+||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46899999999999999999999999997654433334445555554 57889999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----------- 459 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----------- 459 (489)
|+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCG 158 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccC
Confidence 9999988765 448899999999999999999999999999999999999999999999999886321
Q ss_pred ----CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ....|+|++|++++++++|..||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 197 (321)
T cd05603 159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFY 197 (321)
T ss_pred CcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCC
Confidence 11111 134699999999999999999985
No 73
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.96 E-value=3e-28 Score=242.09 Aligned_cols=175 Identities=32% Similarity=0.531 Sum_probs=151.2
Q ss_pred cCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCCCH
Q 042772 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGEL 393 (489)
Q Consensus 314 LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ggsL 393 (489)
||+|+||+||+|.++.+++.||+|.+.+...........+..|+.+++.++||||+++++++.....+|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 79999999999999999999999999766544444556778899999999999999999999999999999999999999
Q ss_pred HHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----------
Q 042772 394 FALLDKQ--PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----------- 460 (489)
Q Consensus 394 ~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----------- 460 (489)
.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~ 160 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGT 160 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCC
Confidence 9887542 234589999999999999999999999999999999999999999999999999864321
Q ss_pred ----CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ----KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ----~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 161 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~ 198 (280)
T cd05608 161 PGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFR 198 (280)
T ss_pred cCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 1111 235699999999999999999985
No 74
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.96 E-value=3.1e-28 Score=248.02 Aligned_cols=175 Identities=32% Similarity=0.600 Sum_probs=153.1
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
+.||+|+||.||+|....+++.||+|++.+.........+.+..|..++..+ .||||+.+++++.....+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999999876555555667788899999887 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----------- 459 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----------- 459 (489)
|+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (327)
T cd05617 81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCG 158 (327)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccC
Confidence 9999988765 348999999999999999999999999999999999999999999999999886321
Q ss_pred ----CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~ 197 (327)
T cd05617 159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD 197 (327)
T ss_pred CcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCC
Confidence 01111 134699999999999999999994
No 75
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.96 E-value=4.1e-28 Score=240.73 Aligned_cols=175 Identities=28% Similarity=0.525 Sum_probs=150.7
Q ss_pred cCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCCCH
Q 042772 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGEL 393 (489)
Q Consensus 314 LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ggsL 393 (489)
||+|+||.||++..+.+|+.||+|.+.............+..|+++++.++||||+++++++....+.|+||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 79999999999999999999999999765443333344556799999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-------------
Q 042772 394 FALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------------- 460 (489)
Q Consensus 394 ~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------------- 460 (489)
.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y 160 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGY 160 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCc
Confidence 9988765555588999999999999999999999999999999999999999999999999864321
Q ss_pred -CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 -KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ ....+|+|++|++++++++|..||.
T Consensus 161 ~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~ 195 (277)
T cd05607 161 MAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFK 195 (277)
T ss_pred cCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCC
Confidence 111 1234699999999999999999984
No 76
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.96 E-value=2.4e-28 Score=248.27 Aligned_cols=175 Identities=41% Similarity=0.647 Sum_probs=149.0
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHH-HHHhCCCCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE-IMSLLDHPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~-il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
+.||+|+||+||+|.++.+|+.||+|++.+...........+..|.. +++.++||||+++++++......|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46899999999999999999999999997654444444455556655 46778999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----------- 459 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----------- 459 (489)
|+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCG 158 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccC
Confidence 9999998765 448999999999999999999999999999999999999999999999999986321
Q ss_pred ----CCCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 ----CKPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----~~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+ ....+|+|++|++++++++|..||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~ 197 (325)
T cd05604 159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFY 197 (325)
T ss_pred ChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCC
Confidence 0111 1234699999999999999999985
No 77
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=3.1e-28 Score=247.88 Aligned_cols=180 Identities=40% Similarity=0.660 Sum_probs=153.8
Q ss_pred CcccccccCCCCceEEEEEEEc---CCCcEEEEEEeeccccc-chHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQ---GAGELYAMKAMEKSVML-NRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~---~tg~~vAiK~i~~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~ 381 (489)
+|++++.||+|+||.||+|... .+++.||+|++.+.... .......+..|+.+++.+ +||||+++++++.....+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4889999999999999999864 47899999999764332 233456678899999999 599999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-- 459 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-- 459 (489)
++||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 9999999999999999765 348999999999999999999999999999999999999999999999999986321
Q ss_pred --------------CCCc-------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 --------------CKPQ-------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --------------~~~~-------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+ ....+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~ 208 (332)
T cd05614 159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFT 208 (332)
T ss_pred CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCC
Confidence 0122 1234699999999999999999984
No 78
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.96 E-value=3.1e-28 Score=246.86 Aligned_cols=175 Identities=38% Similarity=0.705 Sum_probs=150.0
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
+.||+|+||.||+|.++.+|+.||+|.+++..............|..++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4699999999999999999999999999875433334456667788888754 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----------- 459 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----------- 459 (489)
|+|..++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCG 158 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCC
Confidence 9999999775 348999999999999999999999999999999999999999999999999875321
Q ss_pred ----CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~ 197 (316)
T cd05620 159 TPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFH 197 (316)
T ss_pred CcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCC
Confidence 11221 234699999999999999999985
No 79
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.96 E-value=5.4e-28 Score=241.08 Aligned_cols=181 Identities=31% Similarity=0.538 Sum_probs=158.0
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEec
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDF 387 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy 387 (489)
|+..+.||+|+||.||+|.+..+++.||+|.+.+...........+..|+.+++.++|+||+.+++.+.....+|+||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 77888999999999999999999999999999765444444456677899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-------
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------- 460 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------- 460 (489)
+++++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||++++++.++|+|||++.....
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR 161 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCC
Confidence 9999999998765545689999999999999999999999999999999999999999999999999864321
Q ss_pred -------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 -------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 162 ~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~ 202 (285)
T cd05630 162 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 202 (285)
T ss_pred CCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCC
Confidence 1111 124699999999999999999985
No 80
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.96 E-value=4.2e-28 Score=246.51 Aligned_cols=175 Identities=38% Similarity=0.629 Sum_probs=146.8
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHH-HHHhCCCCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE-IMSLLDHPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~-il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|.. +++.++||||+++++++.....+|+||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999999999999999997654332333334444444 56788999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----------- 459 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----------- 459 (489)
|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~g 158 (325)
T cd05602 81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCG 158 (325)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccC
Confidence 9999999775 347899999999999999999999999999999999999999999999999986321
Q ss_pred ----CCCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 ----CKPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----~~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+ ....+|+|++|++++++++|..||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 197 (325)
T cd05602 159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY 197 (325)
T ss_pred CccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCC
Confidence 0111 1235699999999999999999984
No 81
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.96 E-value=4.3e-28 Score=246.40 Aligned_cols=176 Identities=40% Similarity=0.654 Sum_probs=150.2
Q ss_pred ccccCCCCceEEEEEEEc---CCCcEEEEEEeeccccc-chHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 311 IKPLGCGDTGSVHLVELQ---GAGELYAMKAMEKSVML-NRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 311 ~~~LG~G~fG~Vy~a~~~---~tg~~vAiK~i~~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
++.||+|+||.||+|... .+++.||+|++.+.... .......+..|+.+++.++||||++++++|..++.+|+|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 367999999999999864 46889999999764322 23344567789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------- 459 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------- 459 (489)
|+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 81 YLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence 99999999999875 347899999999999999999999999999999999999999999999999975211
Q ss_pred --------CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 --------CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~ 201 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFT 201 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCC
Confidence 11222 134699999999999999999985
No 82
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96 E-value=7.9e-28 Score=245.30 Aligned_cols=181 Identities=23% Similarity=0.350 Sum_probs=158.0
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEE
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 383 (489)
..++|++++.||+|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++||||+++++++...+.+++
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (331)
T cd06649 3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 80 (331)
T ss_pred CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4578999999999999999999999999999999987542 23445678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEecCCccccCC--
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL-GIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC-- 460 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~-gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~-- 460 (489)
||||+++++|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 158 (331)
T cd06649 81 CMEHMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (331)
T ss_pred EeecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccc
Confidence 999999999999998753 489999999999999999999986 699999999999999999999999999863321
Q ss_pred -----------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 -----------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -----------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 203 (331)
T cd06649 159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIP 203 (331)
T ss_pred cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 1221 234599999999999999999985
No 83
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=5.6e-29 Score=260.25 Aligned_cols=153 Identities=42% Similarity=0.712 Sum_probs=144.9
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeE
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 381 (489)
+.+..-|..++.||-|+||.|.++...+|...||+|.+.+.....++.+..++.|..||...+++-||+||-+|++...+
T Consensus 625 KMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnL 704 (1034)
T KOG0608|consen 625 KMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNL 704 (1034)
T ss_pred hccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCce
Confidence 34456799999999999999999999999999999999988888899999999999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcc
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSF 456 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~ 456 (489)
|+||+|++||++-++|.+. +.|.|+.++++++++.+|+++.|..|+|||||||+|||||.+|+|||+||||++
T Consensus 705 YFVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCT 777 (1034)
T KOG0608|consen 705 YFVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT 777 (1034)
T ss_pred EEEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccc
Confidence 9999999999999999886 569999999999999999999999999999999999999999999999999984
No 84
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.96 E-value=6.5e-28 Score=240.31 Aligned_cols=181 Identities=31% Similarity=0.531 Sum_probs=157.4
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEec
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDF 387 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy 387 (489)
|+..+.||+|+||+||+|.+..+++.||+|.+.+...........+..|+++++.++|+||+.+++++...+..|++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 67788999999999999999999999999999765444444455677899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-------
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------- 460 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------- 460 (489)
+++++|.+++.......+++..+..++.|++.||.|||++||+||||||+||++++++.++|+|||++.....
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR 161 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCC
Confidence 9999999988765445689999999999999999999999999999999999999999999999999854321
Q ss_pred -------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 -------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 162 ~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~ 202 (285)
T cd05632 162 VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFR 202 (285)
T ss_pred CCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCC
Confidence 1221 123599999999999999999985
No 85
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.96 E-value=5e-28 Score=245.49 Aligned_cols=175 Identities=37% Similarity=0.672 Sum_probs=149.9
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHh-CCCCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL-LDHPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
+.||+|+||.||+|.+..+++.||+|.+++..............|..++.. ++||||+++++++.+...+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 468999999999999999999999999987644333445566778888876 4899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----------- 459 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----------- 459 (489)
|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCG 158 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecC
Confidence 9999999765 348899999999999999999999999999999999999999999999999975321
Q ss_pred ----CCCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 ----CKPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----~~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+ ....+|+|++|++++++++|..||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~ 197 (316)
T cd05619 159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFH 197 (316)
T ss_pred CccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCC
Confidence 1121 1234599999999999999999984
No 86
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96 E-value=8.7e-28 Score=245.52 Aligned_cols=181 Identities=23% Similarity=0.349 Sum_probs=157.5
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEE
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 383 (489)
..++|++.+.||+|+||.||+|.+..++..+|+|.+.... .......+.+|+++++.++||||++++++|...+.+++
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 80 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEE
Confidence 4568999999999999999999999999999999887542 23345678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEecCCccccCC--
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL-GIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC-- 460 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~-gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~-- 460 (489)
||||+++|+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~ 158 (333)
T cd06650 81 CMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (333)
T ss_pred EEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc
Confidence 99999999999999875 3488999999999999999999975 799999999999999999999999999864321
Q ss_pred -----------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 -----------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -----------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~ 203 (333)
T cd06650 159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIP 203 (333)
T ss_pred cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 1221 234699999999999999999986
No 87
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.3e-28 Score=250.16 Aligned_cols=180 Identities=27% Similarity=0.315 Sum_probs=153.2
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC-eEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST-HICL 383 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~-~~~l 383 (489)
.++|.....||+|+||.||+|...+ |..||||.++...... ..+|..|+.++.+++|||+|+++|+|.+.. +.+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~L 149 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLL 149 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEE
Confidence 3679999999999999999999886 4899999876543211 455999999999999999999999999888 5999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCCCCEEEecCCcEEEEecCCccccCC
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG---IIYRDLKPENILLQKDGHVVLTDFDLSFMTSC 460 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~g---IvHrDLKP~NILld~~g~vKL~DFGlS~~~~~ 460 (489)
|+||+++|+|.++|......+++|.....|+.++|.||+|||... |+||||||+|||+|++..+||+|||+|+....
T Consensus 150 VYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 150 VYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPE 229 (361)
T ss_pred EEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCc
Confidence 999999999999998864326899999999999999999999754 99999999999999999999999999976543
Q ss_pred ----------------CCcee------ecccccchHHHHHHHHhCCcccC
Q 042772 461 ----------------KPQVF------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ----------------~~~~~------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|++. ..+||++||..+-|+++|..+..
T Consensus 230 ~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d 279 (361)
T KOG1187|consen 230 GDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVD 279 (361)
T ss_pred cccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccC
Confidence 12222 24588999999999999986543
No 88
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.96 E-value=4.9e-28 Score=240.25 Aligned_cols=179 Identities=20% Similarity=0.278 Sum_probs=152.6
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++.+.||+|+||.||+|.++.+++.||+|.+..... .......+.+|+.+++.++||||+++++++.....+|+|||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 69999999999999999999999999999999976432 23345667889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------ 460 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------ 460 (489)
|++++.+..+... . ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~~~~l~~~~~~-~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 81 YVEKNMLELLEEM-P-NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred cCCCCHHHHHHhc-C-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 9988766554433 2 3489999999999999999999999999999999999999999999999999864321
Q ss_pred ----------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ----------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ----------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~ 202 (287)
T cd07848 159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFP 202 (287)
T ss_pred cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCC
Confidence 1221 234589999999999999999985
No 89
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.6e-28 Score=244.54 Aligned_cols=179 Identities=24% Similarity=0.391 Sum_probs=156.1
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe-----CCe
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT-----STH 380 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-----~~~ 380 (489)
..|..++.||.|+||.|..|.++.+|+.||||.+... ..+....++..+|+.+|+.++|+||+.+.+.+.. -+.
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 3566689999999999999999999999999998643 3466678899999999999999999999999876 247
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC 460 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~ 460 (489)
+|+|+|+| +.+|.+.++.+ +.++++.+..+++|+++||.|+|+.+|+||||||.|+|++.+..+||||||+|+.+..
T Consensus 101 vYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 101 VYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK 177 (359)
T ss_pred eEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccc
Confidence 99999999 67999999886 3489999999999999999999999999999999999999999999999999997732
Q ss_pred ---C-------Ccee--------------ecccccchHHHHHHHHhCCcccC
Q 042772 461 ---K-------PQVF--------------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---~-------~~~~--------------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
. ...| ..-|+||.|+++-||++|...|.
T Consensus 178 ~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFp 229 (359)
T KOG0660|consen 178 FFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFP 229 (359)
T ss_pred cCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCC
Confidence 1 1112 23389999999999999998885
No 90
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.96 E-value=7.2e-28 Score=244.23 Aligned_cols=175 Identities=37% Similarity=0.658 Sum_probs=152.3
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
+.||+|+||.||+|.++.+++.||+|++.+...........+..|..++..+ +||||+++++++.....+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999876554455667778899999887 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----------- 459 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----------- 459 (489)
|+|..++... ..+++..+..++.|++.||.|||++||+||||||+|||+++++.+||+|||++....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (318)
T cd05570 81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCG 158 (318)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceec
Confidence 9999998775 348999999999999999999999999999999999999999999999999875311
Q ss_pred ----CCCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 ----CKPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----~~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+ ....+|+|++|++++++++|..||.
T Consensus 159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~ 197 (318)
T cd05570 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFE 197 (318)
T ss_pred CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCC
Confidence 0111 1234599999999999999999985
No 91
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.8e-28 Score=257.60 Aligned_cols=188 Identities=26% Similarity=0.362 Sum_probs=157.3
Q ss_pred CccccccCcccccccCCCCceEEEEEEEcCCCc---E-EEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEE
Q 042772 300 GEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGE---L-YAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASF 375 (489)
Q Consensus 300 ~~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~---~-vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~ 375 (489)
.+.+..++..+.+.||+|+||.||+|..+..+. . ||+|..+.+....+.....+..|.++|++++|||||++||+.
T Consensus 151 ~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa 230 (474)
T KOG0194|consen 151 KWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA 230 (474)
T ss_pred ccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 345666777788999999999999999875422 3 899998764445677889999999999999999999999999
Q ss_pred EeCCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCc
Q 042772 376 QTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455 (489)
Q Consensus 376 ~~~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS 455 (489)
..+..+++|||+|+||+|.++|.+.+. .++..+...++.+.+.||+|||+++++||||..+|+|++.++.+||+|||+|
T Consensus 231 ~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs 309 (474)
T KOG0194|consen 231 VLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLS 309 (474)
T ss_pred cCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccc
Confidence 999999999999999999999998754 4899999999999999999999999999999999999999999999999999
Q ss_pred cccC--------C-CCcee------------ecccccchHHHHHHHHh-CCcccC
Q 042772 456 FMTS--------C-KPQVF------------YHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 456 ~~~~--------~-~~~~~------------~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+... + -|-.| ..+|||+||..++|+.. |..||.
T Consensus 310 ~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~ 364 (474)
T KOG0194|consen 310 RAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYP 364 (474)
T ss_pred cCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCC
Confidence 7543 1 12222 33477777777777653 666765
No 92
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.95 E-value=4e-29 Score=258.37 Aligned_cols=183 Identities=25% Similarity=0.463 Sum_probs=156.9
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCe-EEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTH-ICL 383 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~-~~l 383 (489)
.++|..++.+|+|+||.++++.++..++.|++|.+.......+. ......|+.+++++.|||||.+.+.|..++. ++|
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~-r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE-RRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh-hHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 35799999999999999999999999999999999876655443 3467889999999999999999999998887 999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCCC-
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKP- 462 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~~- 462 (489)
||+||+||+|.+.++++.+..++++.+..|+.|++.|+.|||+++|+|||||+.|||+++++.|||+|||+|+.....-
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~ 161 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS 161 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchh
Confidence 9999999999999999877779999999999999999999999999999999999999999999999999998765321
Q ss_pred --------ceeecccc---cchHHHHHHHHhCCcccC
Q 042772 463 --------QVFYHAHV---NGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 463 --------~~~~~~~v---~s~g~~a~e~~~G~lpY~ 488 (489)
.++..+.+ -.||+..|+|++||.+|+
T Consensus 162 ~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yE 198 (426)
T KOG0589|consen 162 LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYE 198 (426)
T ss_pred hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHH
Confidence 11111111 236777778888887774
No 93
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.95 E-value=4.5e-28 Score=245.42 Aligned_cols=175 Identities=43% Similarity=0.716 Sum_probs=149.8
Q ss_pred ccccCCCCceEEEEEEE---cCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEec
Q 042772 311 IKPLGCGDTGSVHLVEL---QGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDF 387 (489)
Q Consensus 311 ~~~LG~G~fG~Vy~a~~---~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy 387 (489)
++.||+|+||.||++.. +.+|+.||+|++.+.... ......+..|++++++++||||+++++++.....+|+||||
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 36799999999999986 357899999999765432 22345567899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC------
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK------ 461 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~------ 461 (489)
+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~ 157 (318)
T cd05582 80 LRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS 157 (318)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceec
Confidence 9999999999765 34899999999999999999999999999999999999999999999999998643211
Q ss_pred ---------Cc------eeecccccchHHHHHHHHhCCcccC
Q 042772 462 ---------PQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 ---------~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+ ....+|+|++|++++++++|..||.
T Consensus 158 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 199 (318)
T cd05582 158 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQ 199 (318)
T ss_pred ccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCC
Confidence 11 1235699999999999999999985
No 94
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.95 E-value=4.2e-28 Score=256.85 Aligned_cols=177 Identities=28% Similarity=0.441 Sum_probs=156.0
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-C-----CCcceeeEEEEeCCe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-H-----PFLPTLYASFQTSTH 380 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-H-----pnIv~l~~~~~~~~~ 380 (489)
+|.+++.||+|+||+|-+|.+..|++.||||+++.. .....+...|+.+|..|+ | -|+|+++++|...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 799999999999999999999999999999999754 445667778999999986 4 389999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC--CcEEEEecCCcccc
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD--GHVVLTDFDLSFMT 458 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~--g~vKL~DFGlS~~~ 458 (489)
+|||+|.+ .-+|+++++.+....++...++.++.||+.||.+||+.||||+||||+||||..- ..|||+|||.|+..
T Consensus 263 lciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 263 LCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999999 6699999999988889999999999999999999999999999999999999643 47999999999754
Q ss_pred CC------------CCcee------ecccccchHHHHHHHHhCCcccC
Q 042772 459 SC------------KPQVF------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 ~~------------~~~~~------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.. +|+++ ..-|+||+|+++-|+.+|..+|.
T Consensus 342 ~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfp 389 (586)
T KOG0667|consen 342 SQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFP 389 (586)
T ss_pred CCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccC
Confidence 42 12222 33499999999999999988875
No 95
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.95 E-value=7.6e-28 Score=244.44 Aligned_cols=178 Identities=21% Similarity=0.327 Sum_probs=150.6
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC-----CeE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS-----THI 381 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-----~~~ 381 (489)
+|++.+.||+|+||.||+|.++.+++.||+|.+.... ........+.+|+.+++.++||||+++++++... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 5889999999999999999999999999999986432 2233445678899999999999999999987543 358
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-- 459 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-- 459 (489)
|+||||+ +++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 80 ~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 80 YVVFELM-ESDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEEecC-CCCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999999 579999987653 48999999999999999999999999999999999999999999999999986421
Q ss_pred ----------------CCCce--------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----------------CKPQV--------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----------------~~~~~--------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~ 209 (338)
T cd07859 157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFP 209 (338)
T ss_pred cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCC
Confidence 11221 123589999999999999999984
No 96
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.95 E-value=4.8e-28 Score=246.41 Aligned_cols=173 Identities=38% Similarity=0.622 Sum_probs=147.1
Q ss_pred cCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC---CCCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL---DHPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 314 LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l---~HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
||+|+||+||+|.++.+++.||+|++.+..............|..++..+ .||||+.+++++.....+|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999999999999999999765443344455566677777655 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----------- 459 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----------- 459 (489)
|+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g 158 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCG 158 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccC
Confidence 9999998765 448999999999999999999999999999999999999999999999999986321
Q ss_pred ----CCCc-------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 ----CKPQ-------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----~~~~-------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+ ....+|+|++|+++++|++|..||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~ 198 (330)
T cd05586 159 TTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFY 198 (330)
T ss_pred CccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCC
Confidence 1122 1234699999999999999999984
No 97
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.1e-28 Score=253.81 Aligned_cols=178 Identities=26% Similarity=0.387 Sum_probs=158.4
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
...|...+.||+|+.|.||.|....+++.||+|.++.... ....-+.+|+.+|+..+|+|||.+++.|...+.+|+|
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q---~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ---PKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC---CchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 3568899999999999999999999999999999987643 3346678999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC---- 460 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~---- 460 (489)
|||++||+|-+.+... .++|.++..++.+++.||+|||.+||+|||||.+|||++.+|.+||+|||++....+
T Consensus 349 MEym~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~K 425 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSK 425 (550)
T ss_pred EeecCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCc
Confidence 9999999999998764 389999999999999999999999999999999999999999999999999865442
Q ss_pred -----CCceeec------------ccccchHHHHHHHHhCCcccC
Q 042772 461 -----KPQVFYH------------AHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -----~~~~~~~------------~~v~s~g~~a~e~~~G~lpY~ 488 (489)
...+|++ .|+|++|.++.||.-|..||.
T Consensus 426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYl 470 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYL 470 (550)
T ss_pred cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCcc
Confidence 2334433 388999999999999999997
No 98
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.3e-28 Score=248.89 Aligned_cols=180 Identities=31% Similarity=0.442 Sum_probs=158.2
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
-|.+.+.||+|.|..|.+|++.-||..||+|++++..+.. .....+..|+..|+.++|||||++|.+..++..+|||+|
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~-~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDT-LSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccch-hhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 4889999999999999999999999999999999877643 344567789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe-cCCcEEEEecCCccccC------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQ-KDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld-~~g~vKL~DFGlS~~~~------ 459 (489)
+=.+|+|++|+.++..+ +.|+.+..++.||+.|+.|+|+..+|||||||+||++. +-|.|||+|||+|....
T Consensus 98 LGD~GDl~DyImKHe~G-l~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~ 176 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEEG-LNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLT 176 (864)
T ss_pred ecCCchHHHHHHhhhcc-ccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhh
Confidence 99999999999887544 89999999999999999999999999999999998775 56899999999995321
Q ss_pred --------CCCcee-------ecccccchHHHHHHHHhCCcccC
Q 042772 460 --------CKPQVF-------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --------~~~~~~-------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+.. ...++|++|+++|.+.||..||.
T Consensus 177 TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFq 220 (864)
T KOG4717|consen 177 TSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQ 220 (864)
T ss_pred cccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccc
Confidence 223222 23389999999999999999995
No 99
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.95 E-value=3.7e-27 Score=236.56 Aligned_cols=182 Identities=24% Similarity=0.328 Sum_probs=149.7
Q ss_pred ccCcccccccCCCCceEEEEEEEcC----------------CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCc
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQG----------------AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFL 368 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~----------------tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnI 368 (489)
.++|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.++..++||||
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCe
Confidence 4579999999999999999998642 34579999986542 34445678899999999999999
Q ss_pred ceeeEEEEeCCeEEEEEecCCCCCHHHHHhhCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 042772 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQP-----------------MKIFREDSARFYAAEVVIGLEYLHCLGIIY 431 (489)
Q Consensus 369 v~l~~~~~~~~~~~lVmEy~~ggsL~~~L~~~~-----------------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvH 431 (489)
+++++++......++||||+++|+|.+++.... ...+++..+..++.||+.||.|||++||+|
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 999999999999999999999999999986531 123577888999999999999999999999
Q ss_pred cCCCCCCEEEecCCcEEEEecCCccccCC-----------------CCc------eeecccccchHHHHHHHHh--CCcc
Q 042772 432 RDLKPENILLQKDGHVVLTDFDLSFMTSC-----------------KPQ------VFYHAHVNGFYFIMYKWLT--GYFT 486 (489)
Q Consensus 432 rDLKP~NILld~~g~vKL~DFGlS~~~~~-----------------~~~------~~~~~~v~s~g~~a~e~~~--G~lp 486 (489)
|||||+|||++.++.+||+|||+++.... +|+ ....+|+|++|++++++++ |..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999864311 111 1234588999999999876 4566
Q ss_pred cC
Q 042772 487 YV 488 (489)
Q Consensus 487 Y~ 488 (489)
|.
T Consensus 242 ~~ 243 (304)
T cd05096 242 YG 243 (304)
T ss_pred CC
Confidence 63
No 100
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.95 E-value=2.9e-27 Score=232.83 Aligned_cols=183 Identities=16% Similarity=0.225 Sum_probs=154.0
Q ss_pred ccccCcccccccCCCCceEEEEEEEc---CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQ---GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST 379 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~---~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 379 (489)
+...+|++.+.||+|+||.||+|.++ ..+..||+|.++... .......+..|+.+++.++||||+++++++....
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 79 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN 79 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC
Confidence 34567999999999999999999875 446799999987542 2344567888999999999999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++|++||||||+|||++.++.++++|||.+....
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 9999999999999999997653 358999999999999999999999999999999999999999999999999864321
Q ss_pred ----------------CCCc------eeecccccchHHHHHHHH-hCCcccC
Q 042772 460 ----------------CKPQ------VFYHAHVNGFYFIMYKWL-TGYFTYV 488 (489)
Q Consensus 460 ----------------~~~~------~~~~~~v~s~g~~a~e~~-~G~lpY~ 488 (489)
.+|+ ....+|+|++|+++++++ +|..||.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~ 210 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYW 210 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcC
Confidence 0111 113469999999999965 5999984
No 101
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.95 E-value=5.4e-27 Score=233.83 Aligned_cols=180 Identities=41% Similarity=0.730 Sum_probs=159.8
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++.+.||+|+||.||++.+..+++.+|+|.+.+...........+..|+++++.++||||+++++++......|+|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 68999999999999999999999999999999977654455566788899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------ 460 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------ 460 (489)
|+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++.....
T Consensus 82 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 159 (290)
T cd05580 82 YVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLC 159 (290)
T ss_pred cCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCC
Confidence 99999999999876 4589999999999999999999999999999999999999999999999999864321
Q ss_pred ------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ....|+|++|++++++++|..||.
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 199 (290)
T cd05580 160 GTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFF 199 (290)
T ss_pred CCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 1221 124599999999999999999985
No 102
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=3.1e-27 Score=247.36 Aligned_cols=173 Identities=21% Similarity=0.284 Sum_probs=149.4
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 382 (489)
+...+|++++.||+|+||.||+|.+..+++.||+|.... ..+.+|+.+++.++||||++++++|......+
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 159 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFTC 159 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeE
Confidence 344679999999999999999999999999999996532 34567999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC---
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS--- 459 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~--- 459 (489)
++||++ +++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus 160 lv~e~~-~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 160 LILPRY-KTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EEEecC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 999999 57999998765 348899999999999999999999999999999999999999999999999985321
Q ss_pred -------------CCCce------eecccccchHHHHHHHHhCCccc
Q 042772 460 -------------CKPQV------FYHAHVNGFYFIMYKWLTGYFTY 487 (489)
Q Consensus 460 -------------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY 487 (489)
.+|+. ...+|+|++|++++++++|..||
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~ 283 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSL 283 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence 12222 22458999999999999998764
No 103
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.95 E-value=6.3e-28 Score=256.64 Aligned_cols=182 Identities=29% Similarity=0.379 Sum_probs=153.7
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC------
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST------ 379 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~------ 379 (489)
+.|...+.||+|+||.||+++++.+|+.||+|.+++.. ....++...+|+++|++++|||||++++.-.+..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccc
Confidence 35778899999999999999999999999999997643 4455678889999999999999999998765433
Q ss_pred eEEEEEecCCCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec--CC--cEEEEecCC
Q 042772 380 HICLITDFCPGGELFALLDKQ-PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQK--DG--HVVLTDFDL 454 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~-~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~--~g--~vKL~DFGl 454 (489)
...++||||+||+|...|.+- ....|++.+.+.++..++.||.|||++||+||||||.||++.. +| ..||+|||.
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 468999999999999999863 2234999999999999999999999999999999999999953 34 469999999
Q ss_pred ccccCCCC---------------------ceeecccccchHHHHHHHHhCCcccCC
Q 042772 455 SFMTSCKP---------------------QVFYHAHVNGFYFIMYKWLTGYFTYVP 489 (489)
Q Consensus 455 S~~~~~~~---------------------~~~~~~~v~s~g~~a~e~~~G~lpY~~ 489 (489)
|+.+.... .+....|.|++|+++|+-++|.+||.|
T Consensus 171 Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 171 ARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred cccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 98665321 112234889999999999999999986
No 104
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.95 E-value=4.6e-27 Score=233.63 Aligned_cols=181 Identities=22% Similarity=0.328 Sum_probs=147.7
Q ss_pred cCcccccccCCCCceEEEEEEEcC-CCcEEEEEEeecccccchHHHHHHHHHHHHHHhC---CCCCcceeeEEEE-----
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQG-AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL---DHPFLPTLYASFQ----- 376 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~-tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l---~HpnIv~l~~~~~----- 376 (489)
++|++++.||+|+||.||+|.+.. +++.||+|.+....... .....+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 369999999999999999999854 46889999987543222 2223455677776665 6999999999885
Q ss_pred eCCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcc
Q 042772 377 TSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSF 456 (489)
Q Consensus 377 ~~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~ 456 (489)
....+++||||++ ++|.+++.......+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 2456999999995 699999987655568999999999999999999999999999999999999999999999999986
Q ss_pred ccCC--------------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 457 MTSC--------------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 457 ~~~~--------------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.... +|+ ....+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 210 (290)
T cd07862 159 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 210 (290)
T ss_pred eccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcC
Confidence 4321 121 1234599999999999999999984
No 105
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.95 E-value=5.6e-27 Score=236.33 Aligned_cols=182 Identities=55% Similarity=0.936 Sum_probs=160.8
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++.+.||+|+||.||+|....+++.||+|.+.+.........+.+..|+++++.++||||+++++.+......|+|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 68999999999999999999999999999999987655444567788999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------ 460 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------ 460 (489)
|+.+++|.+++.......+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++.....
T Consensus 82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (316)
T cd05574 82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVS 161 (316)
T ss_pred ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccc
Confidence 99999999999876556789999999999999999999999999999999999999999999999998754321
Q ss_pred --------------------------------------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 --------------------------------------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 --------------------------------------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ ....+|+|++|++++++++|..||.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~ 233 (316)
T cd05574 162 KALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFK 233 (316)
T ss_pred cccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCC
Confidence 011 1124589999999999999999984
No 106
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.95 E-value=3.7e-27 Score=237.38 Aligned_cols=180 Identities=22% Similarity=0.339 Sum_probs=153.2
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
.++|.+.+.||+|+||.||+|.++.+++.||+|.++.... ......+.+|+.+++.++||||+++++++..+...++|
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 3579999999999999999999999999999999875432 22234566799999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----- 459 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----- 459 (489)
|||++ ++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 83 ~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 160 (309)
T cd07872 83 FEYLD-KDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 160 (309)
T ss_pred EeCCC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCccc
Confidence 99996 58998887653 347899999999999999999999999999999999999999999999999985321
Q ss_pred ----------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~ 206 (309)
T cd07872 161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFP 206 (309)
T ss_pred cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 11221 224589999999999999999984
No 107
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.95 E-value=2.8e-27 Score=245.92 Aligned_cols=184 Identities=22% Similarity=0.312 Sum_probs=153.5
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCC-----CcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGA-----GELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQ 376 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~t-----g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~ 376 (489)
+..++|++.+.||+|+||.||+|.+..+ +..||+|.+.... .......+..|+.+++.+ +||||+++++++.
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 3456799999999999999999986544 3589999997543 233456788899999999 8999999999999
Q ss_pred eCCeEEEEEecCCCCCHHHHHhhCC-------------------------------------------------------
Q 042772 377 TSTHICLITDFCPGGELFALLDKQP------------------------------------------------------- 401 (489)
Q Consensus 377 ~~~~~~lVmEy~~ggsL~~~L~~~~------------------------------------------------------- 401 (489)
....+++||||+++|+|.+++....
T Consensus 113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 9999999999999999999986421
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC--------
Q 042772 402 -------------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC-------- 460 (489)
Q Consensus 402 -------------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~-------- 460 (489)
...+++..+..++.||+.||.|||++||+||||||+|||+++++.+||+|||+++....
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence 12478888999999999999999999999999999999999999999999999864211
Q ss_pred ---------CCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 461 ---------KPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 ---------~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+ ....+|+|++|++++++++ |..||.
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~ 316 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYP 316 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCc
Confidence 111 1234599999999999986 999984
No 108
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.95 E-value=4.8e-28 Score=241.48 Aligned_cols=174 Identities=24% Similarity=0.378 Sum_probs=142.9
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC--C---eE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS--T---HI 381 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~---~~ 381 (489)
.|...+.+|+|+||.||.|....+++.||||.+-.... .--+|.++|+.++|||||++.-+|... . .+
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 48889999999999999999999999999998865421 112499999999999999999888643 2 56
Q ss_pred EEEEecCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEEecCCcccc
Q 042772 382 CLITDFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD-GHVVLTDFDLSFMT 458 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~-g~vKL~DFGlS~~~ 458 (489)
.+||||+|. +|.+.++.. .+..++.-.++.+..||++||.|||+.||+||||||.|+|+|.+ |.+||||||.|..+
T Consensus 98 nlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 98 NLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 789999975 999999842 22347888899999999999999999999999999999999965 89999999999765
Q ss_pred CC-C--------------------CceeecccccchHHHHHHHHhCCcccC
Q 042772 459 SC-K--------------------PQVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 ~~-~--------------------~~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.. . .++...-|+||.|+.+-|++.|...|.
T Consensus 177 ~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFp 227 (364)
T KOG0658|consen 177 VKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFP 227 (364)
T ss_pred ccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccC
Confidence 31 1 122223388999999999998888774
No 109
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.95 E-value=3.2e-27 Score=244.63 Aligned_cols=178 Identities=22% Similarity=0.373 Sum_probs=152.3
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC-----eE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST-----HI 381 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~-----~~ 381 (489)
+|++.+.||+|+||.||+|.+..+++.||+|.+.... .......++.+|+.+++.++||||+++++++.... ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 4888999999999999999999999999999986432 23334567888999999999999999999998776 79
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC- 460 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~- 460 (489)
|+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 99999995 6898888664 4589999999999999999999999999999999999999999999999999864221
Q ss_pred ---------------CCc-------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 ---------------KPQ-------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---------------~~~-------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ .....|+|++|++++++++|..||.
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 206 (372)
T cd07853 157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQ 206 (372)
T ss_pred ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCC
Confidence 111 1234599999999999999999984
No 110
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.95 E-value=7.8e-27 Score=227.42 Aligned_cols=180 Identities=23% Similarity=0.459 Sum_probs=157.5
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++.+.||.|+||.||++.+..+++.+|+|.+.... .....+.+..|..+++.++||||+++++++.+...+|++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 4888999999999999999999999999999986432 23456778889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC-----
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK----- 461 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~----- 461 (489)
|+++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||++++++.++|+|||++......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYAC 158 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccc
Confidence 999999999998765566899999999999999999999999999999999999999999999999998643211
Q ss_pred ----------Cce------eecccccchHHHHHHHHhCCcccC
Q 042772 462 ----------PQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 ----------~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~ 201 (255)
T cd08219 159 TYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQ 201 (255)
T ss_pred cccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCC
Confidence 111 134589999999999999999985
No 111
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.95 E-value=5e-27 Score=241.89 Aligned_cols=178 Identities=23% Similarity=0.389 Sum_probs=150.7
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC-----
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST----- 379 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~----- 379 (489)
.++|++.+.||+|+||.||+|.+..+|+.||+|.+..... .......+.+|+.+++.++||||+++++++....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc-chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4689999999999999999999999999999999975432 3344567788999999999999999999986543
Q ss_pred -eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcccc
Q 042772 380 -HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458 (489)
Q Consensus 380 -~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~ 458 (489)
.+|+||||++ ++|.+.+.. .+++..+..++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++..
T Consensus 99 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~ 173 (359)
T cd07876 99 QDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 173 (359)
T ss_pred ceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence 5799999995 577777643 2788999999999999999999999999999999999999999999999998632
Q ss_pred C--------------CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 459 S--------------CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 ~--------------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
. .+|+. ...+|+|++|++++++++|..||.
T Consensus 174 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~ 223 (359)
T cd07876 174 CTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQ 223 (359)
T ss_pred ccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 1 12222 234599999999999999999984
No 112
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.95 E-value=4.9e-28 Score=232.72 Aligned_cols=182 Identities=26% Similarity=0.420 Sum_probs=154.5
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccc-----cchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEe
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVM-----LNRNKVHRACIEREIMSLL-DHPFLPTLYASFQT 377 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~-----~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~ 377 (489)
.+..|...+.||.|..+.|.++.++.+|+.+|+|++..... ...........|+.||+++ .||+|+.+.++|++
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 35679999999999999999999999999999999965322 1223345667799999997 69999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccc
Q 042772 378 STHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFM 457 (489)
Q Consensus 378 ~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~ 457 (489)
+..+++|+|.|+.|.|+++|... -++++..++.++.|+..|++|||.++||||||||+|||++++..+||+|||+|+.
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQ 172 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeec
Confidence 99999999999999999999875 4599999999999999999999999999999999999999999999999999975
Q ss_pred cCC--------------------------CCceeecccccchHHHHHHHHhCCccc
Q 042772 458 TSC--------------------------KPQVFYHAHVNGFYFIMYKWLTGYFTY 487 (489)
Q Consensus 458 ~~~--------------------------~~~~~~~~~v~s~g~~a~e~~~G~lpY 487 (489)
+.. .|-+....|.|+.|++++-++.||.||
T Consensus 173 l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPF 228 (411)
T KOG0599|consen 173 LEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPF 228 (411)
T ss_pred cCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCch
Confidence 441 122222336677788888888888776
No 113
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.95 E-value=6e-27 Score=251.26 Aligned_cols=180 Identities=22% Similarity=0.281 Sum_probs=153.7
Q ss_pred cCcccccccCCCCceEEEEEEEcCC-CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGA-GELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~t-g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
..|.+.+.||+|+||.||+|....+ ++.||+|.+... .......+..|+.+++.++||||+++++++...+.+|+|
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv 143 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence 3599999999999999999998877 788999976433 334456677899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC--
Q 042772 385 TDFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC-- 460 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~-- 460 (489)
|||+++|+|.+++... ...++++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 9999999999988642 234589999999999999999999999999999999999999999999999999864321
Q ss_pred ---------------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 ---------------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---------------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ ....+|+|++|++++++++|..||.
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~ 272 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFK 272 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCC
Confidence 111 1123489999999999999999985
No 114
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.95 E-value=1.4e-26 Score=225.03 Aligned_cols=181 Identities=25% Similarity=0.424 Sum_probs=158.5
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|.+.+.||+|++|.||+|.++.+++.|++|.+..... .......+..|+.+++.++||||+++++++......++|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC-CHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 47888999999999999999999999999999875433 34456778889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------ 460 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------ 460 (489)
|+++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.....
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~ 159 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFAN 159 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhh
Confidence 99999999999876555689999999999999999999999999999999999999999999999998764321
Q ss_pred ---------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ---------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 202 (256)
T cd08529 160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFD 202 (256)
T ss_pred ccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence 1111 134699999999999999999985
No 115
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.95 E-value=8.9e-27 Score=228.28 Aligned_cols=183 Identities=18% Similarity=0.304 Sum_probs=158.2
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++.+.||+|+||.||+|....+++.||+|.++............+..|+.+++.++||||+++++++...+..+++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57999999999999999999999999999999887654445556677888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC----
Q 042772 386 DFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS---- 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~---- 459 (489)
||+++++|.+++... ....+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~ 161 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence 999999999988642 22447899999999999999999999999999999999999999999999999876422
Q ss_pred -----------CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 -----------CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 -----------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~ 207 (267)
T cd08228 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 207 (267)
T ss_pred HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence 11222 123589999999999999999984
No 116
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.95 E-value=5.7e-27 Score=243.67 Aligned_cols=184 Identities=21% Similarity=0.317 Sum_probs=153.0
Q ss_pred ccccCcccccccCCCCceEEEEEEE-----cCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVEL-----QGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQ 376 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~-----~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~ 376 (489)
+..++|++.+.||+|+||.||+|.+ ..++..||+|+++... .....+.+.+|+.++..+ +||||+++++++.
T Consensus 32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~ 109 (375)
T cd05104 32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGACT 109 (375)
T ss_pred cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence 4456799999999999999999974 3457789999986542 233456788899999999 8999999999999
Q ss_pred eCCeEEEEEecCCCCCHHHHHhhCC-------------------------------------------------------
Q 042772 377 TSTHICLITDFCPGGELFALLDKQP------------------------------------------------------- 401 (489)
Q Consensus 377 ~~~~~~lVmEy~~ggsL~~~L~~~~------------------------------------------------------- 401 (489)
.....++||||+++|+|.+++....
T Consensus 110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 9999999999999999999986532
Q ss_pred ------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC---
Q 042772 402 ------------------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC--- 460 (489)
Q Consensus 402 ------------------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~--- 460 (489)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 12467888999999999999999999999999999999999999999999999853221
Q ss_pred --------------CCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 461 --------------KPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 --------------~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+ ....+|+|++|++++++++ |..||.
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~ 318 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYP 318 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCC
Confidence 111 1234589999999999986 888874
No 117
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.95 E-value=1.8e-27 Score=250.07 Aligned_cols=183 Identities=28% Similarity=0.452 Sum_probs=161.4
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 382 (489)
.....|.+.+.||+|.|+.|.+|.+..|+..||||.+++.... ...++.+.+|+++|+.++|||||+++.+...+..+|
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln-~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLN-PSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY 131 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccC-hHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence 3456799999999999999999999999999999999987654 444555899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC---
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS--- 459 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~--- 459 (489)
+||||+.+|.+++++..+.. ..+..++.++.|++.|++|||+++|+|||||++||||+.+..+||+|||+|....
T Consensus 132 lV~eya~~ge~~~yl~~~gr--~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~ 209 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVKHGR--MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL 209 (596)
T ss_pred EEEEeccCchhHHHHHhccc--chhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecccc
Confidence 99999999999999998744 6779999999999999999999999999999999999999999999999996433
Q ss_pred -----CC------C-------ceeecccccchHHHHHHHHhCCcccC
Q 042772 460 -----CK------P-------QVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 -----~~------~-------~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|. | ......|+|++|..+|-+..|.+||+
T Consensus 210 ~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFD 256 (596)
T KOG0586|consen 210 MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFD 256 (596)
T ss_pred cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccC
Confidence 11 1 11233488999999999999999986
No 118
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.95 E-value=1.6e-26 Score=233.10 Aligned_cols=178 Identities=23% Similarity=0.357 Sum_probs=155.7
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++.+.||+|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++||||+++++++..++.++++||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 6999999999999999999999999999999886532 33455678889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~-~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
|+++++|.+++... ..+++..+..++.|++.||.|||+ .+++|+||||+|||++.++.+||+|||++.....
T Consensus 80 y~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 157 (308)
T cd06615 80 HMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 157 (308)
T ss_pred ccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccccccc
Confidence 99999999999875 448999999999999999999997 5999999999999999999999999998864221
Q ss_pred --------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 --------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 --------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ ....+|+|++|++++++++|..||.
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~ 199 (308)
T cd06615 158 FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIP 199 (308)
T ss_pred CCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCC
Confidence 111 1234689999999999999999984
No 119
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.95 E-value=1.6e-26 Score=225.00 Aligned_cols=181 Identities=27% Similarity=0.475 Sum_probs=158.5
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|+.++.||.|+||.||.+....+++.+++|.+..... .......+.+|++++++++||||+++++++.....++++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 58999999999999999999999999999999875433 23445678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC-----
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK----- 461 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~----- 461 (489)
|+++++|.+++.......+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAE 159 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccccccc
Confidence 999999999998765556899999999999999999999999999999999999999999999999988643211
Q ss_pred ----------Cce------eecccccchHHHHHHHHhCCcccC
Q 042772 462 ----------PQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 ----------~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+. ...+|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~ 202 (256)
T cd08221 160 TVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFD 202 (256)
T ss_pred ccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCC
Confidence 111 134699999999999999999885
No 120
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.95 E-value=8e-27 Score=262.05 Aligned_cols=183 Identities=24% Similarity=0.305 Sum_probs=156.0
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++.+.||+|+||.||+|.+..+++.||+|.+...........+++.+|+.+++.++||||+++++++.+.+..|++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57999999999999999999999999999999997654434445677889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcc
Q 042772 386 DFCPGGELFALLDKQP---------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSF 456 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~---------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~ 456 (489)
||++||+|.+++.... ...++...+..++.||+.||.|||++||+||||||+||+++.+|.+||+|||++.
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence 9999999999986421 1224566778899999999999999999999999999999999999999999986
Q ss_pred ccC----------------------------C-----CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 457 MTS----------------------------C-----KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 457 ~~~----------------------------~-----~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
... . +|+. ...+|+|++|++++++++|..||.
T Consensus 162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~ 232 (932)
T PRK13184 162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYR 232 (932)
T ss_pred ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence 441 0 1111 123489999999999999999984
No 121
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.95 E-value=8.1e-27 Score=228.58 Aligned_cols=183 Identities=20% Similarity=0.334 Sum_probs=158.6
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++.+.||+|+||.||+|....++..+|+|.+.............+..|+.+++.++||||+++++++......+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 57999999999999999999999999999999887654445556678889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC---
Q 042772 386 DFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC--- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~--- 460 (489)
||+++++|.+++... ....+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc
Confidence 999999999998742 234589999999999999999999999999999999999999999999999998754321
Q ss_pred ------------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ------------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ------------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 162 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 207 (267)
T cd08229 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 207 (267)
T ss_pred ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcc
Confidence 1211 123599999999999999999984
No 122
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.95 E-value=5.9e-27 Score=228.67 Aligned_cols=180 Identities=36% Similarity=0.615 Sum_probs=160.4
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++.+.||.|+||.||+|.+..+++.||+|.+.+.........+.+..|++++++++||||+++++++......++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 48899999999999999999999999999999987655555567889999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC-----
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK----- 461 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~----- 461 (489)
|+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 158 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTS 158 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccc
Confidence 99999999999875 35899999999999999999999999999999999999999999999999988643211
Q ss_pred ---------Cce------eecccccchHHHHHHHHhCCcccC
Q 042772 462 ---------PQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 ---------~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+. ...+|+|++|.+++++++|..||.
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 200 (258)
T cd05578 159 TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYR 200 (258)
T ss_pred cCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCC
Confidence 111 235699999999999999999986
No 123
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=2.2e-27 Score=258.30 Aligned_cols=157 Identities=29% Similarity=0.384 Sum_probs=139.5
Q ss_pred cCCCccccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEE-
Q 042772 297 TGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYAS- 374 (489)
Q Consensus 297 ~~~~~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~- 374 (489)
.|....++..++++.+.|.+|||+.||+|.+...|..||+|.+-. .+...+..+++|+++|++|. |+|||.++++
T Consensus 28 ~G~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~---~de~~L~~v~~EI~~MK~L~gh~nIV~yidss 104 (738)
T KOG1989|consen 28 VGQTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYV---NDEEALNAVKREIDIMKLLSGHKNIVSYIDSS 104 (738)
T ss_pred CceEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeec---CCHHHHHHHHHHHHHHHHhcCCCceeeEeccc
Confidence 344556777899999999999999999999998889999998843 36778899999999999996 9999999993
Q ss_pred EEeC------CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEecCCc
Q 042772 375 FQTS------THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG--IIYRDLKPENILLQKDGH 446 (489)
Q Consensus 375 ~~~~------~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~g--IvHrDLKP~NILld~~g~ 446 (489)
.... -.++|+||||+||.|-++|..+....|++.+++.|+.|+|+||.+||... |||||||-|||||+.+|+
T Consensus 105 ~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~ 184 (738)
T KOG1989|consen 105 AINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGN 184 (738)
T ss_pred cccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCC
Confidence 3221 25899999999999999999765566999999999999999999999988 999999999999999999
Q ss_pred EEEEecCCcc
Q 042772 447 VVLTDFDLSF 456 (489)
Q Consensus 447 vKL~DFGlS~ 456 (489)
.||||||.++
T Consensus 185 ~KLCDFGSat 194 (738)
T KOG1989|consen 185 YKLCDFGSAT 194 (738)
T ss_pred EEeCcccccc
Confidence 9999999986
No 124
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.95 E-value=1.3e-26 Score=227.41 Aligned_cols=179 Identities=22% Similarity=0.323 Sum_probs=155.1
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
..+|++.+.||+|+||.||+|.+..+++.||+|++.... ......+..|+.+++.++||||+++++++.....+++|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 467999999999999999999999999999999986542 22345677899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----- 459 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----- 459 (489)
|||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++....
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd06646 85 MEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK 162 (267)
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccc
Confidence 9999999999998765 348999999999999999999999999999999999999999999999999885321
Q ss_pred ----------CCCcee---------ecccccchHHHHHHHHhCCcccC
Q 042772 460 ----------CKPQVF---------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----------~~~~~~---------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+.. ..+|+|++|++++++++|..||.
T Consensus 163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~ 210 (267)
T cd06646 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMF 210 (267)
T ss_pred cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCcc
Confidence 112211 24689999999999999999873
No 125
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.95 E-value=8.4e-27 Score=235.71 Aligned_cols=181 Identities=24% Similarity=0.327 Sum_probs=151.6
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcE----EEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGEL----YAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST 379 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~----vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 379 (489)
...+|+..+.||+|+||.||+|.+..++.. ||+|.++.. ......+.+..|+.+++.++||||+++++++...
T Consensus 5 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~- 81 (316)
T cd05108 5 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS- 81 (316)
T ss_pred chhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-
Confidence 346799999999999999999998766654 899988643 2344566788899999999999999999998765
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
..++++||+++|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 82 ~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 82 TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccccccc
Confidence 5789999999999999998753 347889999999999999999999999999999999999999999999999997432
Q ss_pred C-----------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 460 C-----------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 460 ~-----------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
. .|+. ...+|+|++|++++|+++ |..||.
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~ 213 (316)
T cd05108 161 ADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 213 (316)
T ss_pred CCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 1 1111 123489999999999876 999985
No 126
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.95 E-value=1.3e-26 Score=232.95 Aligned_cols=180 Identities=35% Similarity=0.657 Sum_probs=157.7
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++.+.||+|+||.||++.+..+++.|++|.+.+...........+..|+.+++.++||||+++++.+.....+++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 68999999999999999999999999999999976644444556778899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcccc--------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT-------- 458 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~-------- 458 (489)
|++|++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++..
T Consensus 82 ~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (305)
T cd05609 82 YVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL 159 (305)
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc
Confidence 99999999999775 34899999999999999999999999999999999999999999999999987531
Q ss_pred ----------------------CCCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 459 ----------------------SCKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 ----------------------~~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
..+|+. ...+|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~ 217 (305)
T cd05609 160 YEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFF 217 (305)
T ss_pred cccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 011221 123588999999999999999985
No 127
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.95 E-value=1.1e-26 Score=233.64 Aligned_cols=184 Identities=22% Similarity=0.340 Sum_probs=153.5
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcE--EEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCC
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGEL--YAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTST 379 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~--vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~ 379 (489)
+..++|++.+.||+|+||.||+|.++.++.. +|+|.+... ........+..|+.++.++ +||||+++++++...+
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~ 81 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 81 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC
Confidence 3456899999999999999999999877764 466665432 2344556788899999999 8999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC
Q 042772 380 HICLITDFCPGGELFALLDKQP--------------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG 445 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~--------------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g 445 (489)
.+|+||||+++++|.+++.... ...+++..+..++.|++.||.|||++|++||||||+|||++.++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY 161 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC
Confidence 9999999999999999997542 12478999999999999999999999999999999999999999
Q ss_pred cEEEEecCCccccC--------------CCCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 446 HVVLTDFDLSFMTS--------------CKPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 446 ~vKL~DFGlS~~~~--------------~~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.+||+|||++.... .+|+ ....+|+|++|++++++++ |..||.
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 225 (303)
T cd05088 162 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 225 (303)
T ss_pred cEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcc
Confidence 99999999985221 1111 1235699999999999997 999884
No 128
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.95 E-value=1.9e-26 Score=225.41 Aligned_cols=183 Identities=21% Similarity=0.335 Sum_probs=158.9
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++.+.||+|+||.||+|....+|+.||+|.++.....+....+.+.+|+++++.++|+||+++++++......+++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 47999999999999999999999999999999987654445555678889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC---
Q 042772 386 DFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC--- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~--- 460 (489)
||+++++|.+++... ....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 161 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence 999999999998652 234478999999999999999999999999999999999999999999999998753221
Q ss_pred ------------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ------------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ------------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 162 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 207 (267)
T cd08224 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 207 (267)
T ss_pred ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcc
Confidence 1221 124599999999999999999983
No 129
>PHA02988 hypothetical protein; Provisional
Probab=99.95 E-value=1.2e-26 Score=231.61 Aligned_cols=173 Identities=15% Similarity=0.170 Sum_probs=148.7
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe----CCeEEEEEec
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT----STHICLITDF 387 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~----~~~~~lVmEy 387 (489)
..||+|++|.||+|.+ +|+.||+|.+.+.........+.+.+|+.++++++||||+++++++.+ ...+++||||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 6789999999999998 488999999976544444446778899999999999999999999876 3578999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecCCccccCC------
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------ 460 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~-~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------ 460 (489)
+++|+|.+++... ..+++.....++.|++.||.|||+ .+++||||||+|||+++++.+||+|||++.....
T Consensus 104 ~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~ 181 (283)
T PHA02988 104 CTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNV 181 (283)
T ss_pred CCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccccccc
Confidence 9999999999875 348899999999999999999998 4999999999999999999999999999864221
Q ss_pred ------CCc--------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 ------KPQ--------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ------~~~--------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ ....+|+|++|++++|+++|..||.
T Consensus 182 ~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~ 223 (283)
T PHA02988 182 NFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFE 223 (283)
T ss_pred CcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCC
Confidence 122 2235699999999999999999995
No 130
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.95 E-value=1.5e-26 Score=226.95 Aligned_cols=182 Identities=23% Similarity=0.291 Sum_probs=157.4
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 382 (489)
+...+|.+.+.||+|+||.||+|.++.+++.||+|.+... ......+.+|+.+++.++||||+++++++..+..++
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 78 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcE
Confidence 3445789999999999999999999999999999998643 223567888999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC--
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC-- 460 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~-- 460 (489)
++|||+++++|.+++.......+++..+..++.|++.||.|||++|++||||||+||++++++.+||+|||++.....
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 999999999999999776555689999999999999999999999999999999999999999999999999864321
Q ss_pred --------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 --------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 --------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.|+. ...+|+|++|++++++++ |..||.
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~ 207 (263)
T cd05052 159 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP 207 (263)
T ss_pred eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 1221 124599999999999997 888874
No 131
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.95 E-value=2.1e-26 Score=224.81 Aligned_cols=181 Identities=25% Similarity=0.333 Sum_probs=156.5
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeeccccc--chHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVML--NRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 383 (489)
++|.+.+.||+|++|.||.|....+++.+|+|.+...... .......+.+|+.++++++||||+++++++.....+++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4689999999999999999999999999999998754322 22345678889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC----
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS---- 459 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~---- 459 (489)
+|||+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||+|+||++++++.++|+|||++....
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 99999999999999875 348899999999999999999999999999999999999999999999999985321
Q ss_pred --------------CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 --------------CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --------------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|.+++++++|..||.
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 208 (263)
T cd06625 160 SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWA 208 (263)
T ss_pred ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCcc
Confidence 11221 134599999999999999999984
No 132
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.95 E-value=1.3e-26 Score=226.55 Aligned_cols=182 Identities=24% Similarity=0.357 Sum_probs=155.7
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeE
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 381 (489)
.+..++|++++.||+|+||.||+|.... +..||+|.+.... ...+.+..|+.+++.++||||+++++++......
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05072 2 EIPRESIKLVKKLGAGQFGEVWMGYYNN-STKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPI 76 (261)
T ss_pred cCchHHeEEeeecCCcCCceEEEEEecC-CceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 3556789999999999999999999764 6679999876432 2346788899999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC- 460 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~- 460 (489)
+++|||+++++|.+++.......+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||++.....
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred EEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 9999999999999999876555688999999999999999999999999999999999999999999999999864321
Q ss_pred ---------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 ---------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 ---------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+. ....|+|++|++++++++ |..||.
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~ 206 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYP 206 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCC
Confidence 1111 123599999999999997 999984
No 133
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.94 E-value=6.7e-28 Score=244.97 Aligned_cols=186 Identities=32% Similarity=0.547 Sum_probs=163.3
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeE
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 381 (489)
.+..+.|+.-++||+|+||.||-++.+.||+.||+|.+.+.....+.......+|..||+++..|+||.+-.+|++.+.+
T Consensus 181 pvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~L 260 (591)
T KOG0986|consen 181 PVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDAL 260 (591)
T ss_pred hccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCce
Confidence 34556799999999999999999999999999999999988777777788889999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK 461 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~ 461 (489)
|+||..|.||+|.-+|.+.....+++..+++++++|+.||++||+.+||+|||||+|||+|+.|+|.|+|+|+|...+..
T Consensus 261 ClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 261 CLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 99999999999999888877667999999999999999999999999999999999999999999999999999755422
Q ss_pred --------------Cc------eeecccccchHHHHHHHHhCCccc
Q 042772 462 --------------PQ------VFYHAHVNGFYFIMYKWLTGYFTY 487 (489)
Q Consensus 462 --------------~~------~~~~~~v~s~g~~a~e~~~G~lpY 487 (489)
|+ +-..+|-|++|+++|||+-|..||
T Consensus 341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPF 386 (591)
T KOG0986|consen 341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPF 386 (591)
T ss_pred CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCch
Confidence 11 123335566777777777777776
No 134
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.94 E-value=1.1e-26 Score=232.72 Aligned_cols=180 Identities=23% Similarity=0.336 Sum_probs=154.0
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
+++|++.+.||.|+||.||+|.+..+++.||+|.+..... ......+..|+.+++.++||||+++++++......++|
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence 4679999999999999999999999999999999865432 22234566799999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----- 459 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----- 459 (489)
|||++ ++|.+++.... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++....
T Consensus 83 ~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (301)
T cd07873 83 FEYLD-KDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 160 (301)
T ss_pred Eeccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence 99996 69999887653 347899999999999999999999999999999999999999999999999885322
Q ss_pred ----------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~ 206 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFP 206 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCC
Confidence 11221 123589999999999999999984
No 135
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.94 E-value=1.8e-26 Score=224.40 Aligned_cols=174 Identities=20% Similarity=0.340 Sum_probs=148.6
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGG 391 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~gg 391 (489)
+.||+|+||.||+|.++.+++.+|+|.+.... .......+.+|+++++.++||||+++++++......++||||++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 46899999999999999999999999876432 3344567889999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------------
Q 042772 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------------ 459 (489)
Q Consensus 392 sL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------------ 459 (489)
+|.+++.... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++....
T Consensus 79 ~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 79 DFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred cHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 9999997643 347899999999999999999999999999999999999999999999999976321
Q ss_pred -----CCCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 460 -----CKPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 460 -----~~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++ |..||.
T Consensus 158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~ 198 (252)
T cd05084 158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYA 198 (252)
T ss_pred CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 11221 123489999999999986 888874
No 136
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=1.2e-26 Score=250.14 Aligned_cols=184 Identities=26% Similarity=0.342 Sum_probs=155.8
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC----
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST---- 379 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~---- 379 (489)
..++|++.+.||+|+||+||+|.+..+++.||+|.+..... .......+..|+.++..++|+||++++..+....
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 34689999999999999999999999999999999976543 3445667888999999999999999988775432
Q ss_pred ----eEEEEEecCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecC
Q 042772 380 ----HICLITDFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFD 453 (489)
Q Consensus 380 ----~~~lVmEy~~ggsL~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFG 453 (489)
.+++||||+++|+|.+++... ....+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFG 188 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFG 188 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecc
Confidence 378999999999999999753 23458999999999999999999999999999999999999999999999999
Q ss_pred CccccCC-----------------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 454 LSFMTSC-----------------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 454 lS~~~~~-----------------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+++.... +|+ ....+|+|++|++++++++|..||.
T Consensus 189 ls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~ 246 (496)
T PTZ00283 189 FSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFD 246 (496)
T ss_pred cCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 9864321 111 1134589999999999999999985
No 137
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.94 E-value=8.3e-27 Score=238.38 Aligned_cols=178 Identities=22% Similarity=0.395 Sum_probs=151.3
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC------C
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------T 379 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~------~ 379 (489)
++|++++.||.|+||.||+|.+..+++.||+|.+.+... .......+.+|+.+++.++||||+++++++... .
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 579999999999999999999999999999999875432 223445677899999999999999999987543 3
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
..|++|+++ +++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 94 ~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~ 169 (343)
T cd07878 94 EVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD 169 (343)
T ss_pred cEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecC
Confidence 579999988 7899988864 348999999999999999999999999999999999999999999999999986432
Q ss_pred ------------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ------------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ------------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 170 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 217 (343)
T cd07878 170 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFP 217 (343)
T ss_pred CCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 12222 234699999999999999999984
No 138
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.94 E-value=1.9e-26 Score=226.35 Aligned_cols=181 Identities=23% Similarity=0.281 Sum_probs=154.4
Q ss_pred ccCcccccccCCCCceEEEEEEEcCC---CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGA---GELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~t---g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 381 (489)
.++|++.+.||+|+||.||+|.++.+ ...||+|.++... .......+..|+.+++.++||||+++++++......
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 35799999999999999999998644 4589999886542 334456788899999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-- 459 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-- 459 (489)
+++|||+++++|.+++..... .+++..+..++.|++.||.|||+++|+|+||||+||++++++.++|+|||++....
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDG-KFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 999999999999999977543 58999999999999999999999999999999999999999999999999986542
Q ss_pred ---------------CCCcee------ecccccchHHHHHHHHh-CCcccC
Q 042772 460 ---------------CKPQVF------YHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 460 ---------------~~~~~~------~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.+|+.. ...|+|++|++++++++ |..||.
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~ 210 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYW 210 (266)
T ss_pred ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCC
Confidence 112211 24589999999999886 999984
No 139
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.94 E-value=1.2e-26 Score=230.12 Aligned_cols=180 Identities=26% Similarity=0.388 Sum_probs=147.8
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC---CCCCcceeeEEEEe-----C
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL---DHPFLPTLYASFQT-----S 378 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l---~HpnIv~l~~~~~~-----~ 378 (489)
+|++.+.||+|+||.||+|.++.+++.||+|.+...... ......+..|+.+++.+ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 488999999999999999999999999999998754322 11223345577766654 79999999998864 3
Q ss_pred CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcccc
Q 042772 379 THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~ 458 (489)
..++++|||++ ++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 46899999996 59999988765555899999999999999999999999999999999999999999999999998643
Q ss_pred CC--------------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 459 SC--------------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 ~~--------------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.. +|+ ....+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~ 208 (288)
T cd07863 159 SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 208 (288)
T ss_pred cCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcC
Confidence 21 122 1234599999999999999998874
No 140
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.94 E-value=2.7e-26 Score=227.50 Aligned_cols=174 Identities=28% Similarity=0.378 Sum_probs=151.2
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++++.||+|+||.||+|.+..+++.||+|.+.... .......+..|+.++++++||||+++++++......++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 6889999999999999999999999999999986542 23345678889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------- 459 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------- 459 (489)
|+++++|..+. .+++..+..++.|++.||.|||+.||+|+||||+|||++.++.++|+|||++....
T Consensus 80 ~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~ 153 (279)
T cd06619 80 FMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTY 153 (279)
T ss_pred cCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCC
Confidence 99999996542 26788999999999999999999999999999999999999999999999985321
Q ss_pred ------CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ------CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 154 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~ 194 (279)
T cd06619 154 VGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYP 194 (279)
T ss_pred CCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCch
Confidence 12222 134599999999999999999984
No 141
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.94 E-value=6.7e-27 Score=227.42 Aligned_cols=178 Identities=31% Similarity=0.530 Sum_probs=153.0
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEec
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDF 387 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy 387 (489)
|++++.||+|+||+||++....+++.||+|.+....... ........|+.+++.++||||+++++++......+++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE-EEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH-HHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc-cccchhhhhhhccccccccccccccccccccccccccccc
Confidence 678899999999999999999999999999998764322 2223345599999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--------
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-------- 459 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-------- 459 (489)
+++++|.+++... ..+++..+..++.|++.||.+||++|++|+||||+||++++++.++|+|||.+....
T Consensus 80 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 157 (260)
T PF00069_consen 80 CPGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP 157 (260)
T ss_dssp ETTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred ccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999843 448999999999999999999999999999999999999999999999999985311
Q ss_pred -------CCC-------ceeecccccchHHHHHHHHhCCcccC
Q 042772 460 -------CKP-------QVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 -------~~~-------~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+| ......|+|++|++++++++|..||.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~ 200 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFE 200 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSST
T ss_pred ccccccccccccccccccccccccccccccccccccccccccc
Confidence 112 22234488999999999999999985
No 142
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.94 E-value=1.8e-26 Score=228.87 Aligned_cols=183 Identities=21% Similarity=0.322 Sum_probs=153.5
Q ss_pred cccCcccccccCCCCceEEEEEEEc----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST 379 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~----~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 379 (489)
.+.+|++.+.||+|+||.||+|... .++..+|+|.+... ........+.+|+.+++.++||||+++++++....
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 80 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDI--NNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ 80 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCC--CCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC
Confidence 4567999999999999999999863 35678999998643 23445567888999999999999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC
Q 042772 380 HICLITDFCPGGELFALLDKQP---------------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD 444 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~---------------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~ 444 (489)
..|++|||+++++|.+++.... ...+++..+..++.|++.||.|||++|++||||||+||+++.+
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC
Confidence 9999999999999999985431 1247888999999999999999999999999999999999999
Q ss_pred CcEEEEecCCccccC-----------------CCCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 445 GHVVLTDFDLSFMTS-----------------CKPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 445 g~vKL~DFGlS~~~~-----------------~~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+.+||+|||+++... .+|+ ....+|+|++|++++++++ |..||.
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~ 228 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYY 228 (283)
T ss_pred CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 999999999986431 1111 1234699999999999997 988873
No 143
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.94 E-value=1.3e-26 Score=226.31 Aligned_cols=180 Identities=25% Similarity=0.307 Sum_probs=156.4
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
..+|++.+.||.|+||.||+|.+.. +..+|+|.+.... ......+..|+.+++.++||||+++++++......++|
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD---LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc---hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 3579999999999999999999988 8899999987542 22345678899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC---- 460 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~---- 460 (489)
|||+++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 9999999999999876556689999999999999999999999999999999999999999999999999864321
Q ss_pred -----------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 -----------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 -----------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++ |..||.
T Consensus 161 ~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~ 206 (261)
T cd05148 161 SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYP 206 (261)
T ss_pred ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 1111 124599999999999997 899985
No 144
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.94 E-value=2.2e-26 Score=227.63 Aligned_cols=183 Identities=23% Similarity=0.350 Sum_probs=154.4
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCC-----cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAG-----ELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS 378 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg-----~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 378 (489)
...+|++.+.||+|+||.||+|.....+ ..||+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 80 (283)
T cd05048 3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE 80 (283)
T ss_pred ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC
Confidence 4567999999999999999999987655 689999886442 334456788999999999999999999999988
Q ss_pred CeEEEEEecCCCCCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC
Q 042772 379 THICLITDFCPGGELFALLDKQPM--------------KIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD 444 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~~~--------------~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~ 444 (489)
...|++|||+++++|.+++..... ..+++..+..++.|++.||.|||++|++|+||||+||+++++
T Consensus 81 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 81 QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG 160 (283)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC
Confidence 899999999999999999976421 347889999999999999999999999999999999999999
Q ss_pred CcEEEEecCCccccC-----------------CCCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 445 GHVVLTDFDLSFMTS-----------------CKPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 445 g~vKL~DFGlS~~~~-----------------~~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+.++|+|||++.... .+|+. ...+|+|++|++++|+++ |..||.
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~ 228 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYY 228 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCC
Confidence 999999999986421 11221 123589999999999986 998874
No 145
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.94 E-value=1.8e-26 Score=226.32 Aligned_cols=179 Identities=25% Similarity=0.352 Sum_probs=155.5
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
.++|++.+.||+|+||.||+|.+..+++.||+|.++... ......+.+|+.+++.++||||+++++++.....+|++
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 357999999999999999999999999999999986542 23345677899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----- 459 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----- 459 (489)
|||+++++|.+++... +.+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++....
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd06645 85 MEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK 162 (267)
T ss_pred EeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccc
Confidence 9999999999999765 348999999999999999999999999999999999999999999999999875321
Q ss_pred ----------CCCce---------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----------CKPQV---------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----------~~~~~---------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~ 210 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMF 210 (267)
T ss_pred cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcc
Confidence 11222 124699999999999999999873
No 146
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.94 E-value=3.2e-26 Score=228.31 Aligned_cols=179 Identities=27% Similarity=0.439 Sum_probs=156.7
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
+.|++++.||.|+||.||+|.+..+++.+++|.+... .......+..|+.+++.++||||+++++++..+...|+||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 5699999999999999999999999999999998654 3455677888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
||+++++|..++.+.. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++....
T Consensus 89 e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 167 (292)
T cd06644 89 EFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRR 167 (292)
T ss_pred ecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccccccc
Confidence 9999999998876543 348999999999999999999999999999999999999999999999999875321
Q ss_pred ---------CCCcee-----------ecccccchHHHHHHHHhCCcccC
Q 042772 460 ---------CKPQVF-----------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------~~~~~~-----------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+.. ..+|+|++|++++++++|..||.
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 216 (292)
T cd06644 168 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH 216 (292)
T ss_pred ceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCc
Confidence 123322 13699999999999999999974
No 147
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.94 E-value=1.3e-26 Score=238.15 Aligned_cols=179 Identities=22% Similarity=0.367 Sum_probs=150.8
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC-----
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS----- 378 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~----- 378 (489)
..++|++.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-ChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 35789999999999999999999999999999999865432 334456777899999999999999999988643
Q ss_pred -CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccc
Q 042772 379 -THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFM 457 (489)
Q Consensus 379 -~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~ 457 (489)
...|+||||++ ++|.+.+.. .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 94 ~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~ 168 (355)
T cd07874 94 FQDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_pred cceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCccccc
Confidence 35799999995 578777754 278899999999999999999999999999999999999999999999999864
Q ss_pred cCC--------------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 458 TSC--------------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 458 ~~~--------------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
... +|+. ...+|+|++|++++++++|..||.
T Consensus 169 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 219 (355)
T cd07874 169 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 219 (355)
T ss_pred CCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 321 1211 234599999999999999999984
No 148
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.94 E-value=2.8e-26 Score=233.13 Aligned_cols=178 Identities=20% Similarity=0.315 Sum_probs=151.8
Q ss_pred cccccCCC--CceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEec
Q 042772 310 PIKPLGCG--DTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDF 387 (489)
Q Consensus 310 ~~~~LG~G--~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy 387 (489)
+++.||+| +|++||++..+.+|+.||+|.++.... .......+.+|+.+++.++||||++++++|..++..|+||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 56789999 789999999999999999999975532 233456677899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--------
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-------- 459 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-------- 459 (489)
+++|+|.+++.......+++..+..++.|++.||.|||++||+||||||+|||++.++.++++||+.+....
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 999999999976544558999999999999999999999999999999999999999999999997532110
Q ss_pred --------------CCCce--------eecccccchHHHHHHHHhCCcccC
Q 042772 460 --------------CKPQV--------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --------------~~~~~--------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 211 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 211 (327)
T ss_pred cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 11222 234699999999999999999984
No 149
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.94 E-value=3.1e-26 Score=225.24 Aligned_cols=181 Identities=24% Similarity=0.326 Sum_probs=152.7
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCC---cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAG---ELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg---~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 381 (489)
..+|++.+.||+|+||.||+|.++.++ ..+|+|.++... .......+..|+.+++.++||||+++++++......
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 457999999999999999999986444 479999886542 233456788899999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC- 460 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~- 460 (489)
|+||||+++++|.+++.... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 99999999999999998754 3478999999999999999999999999999999999999999999999998864321
Q ss_pred -----------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 -----------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 -----------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.|+. ....|+|++|++++++++ |..||.
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~ 211 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 211 (267)
T ss_pred cceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcc
Confidence 1111 123588999999999775 999884
No 150
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=2.2e-26 Score=228.30 Aligned_cols=180 Identities=26% Similarity=0.382 Sum_probs=155.9
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++++.||+|+||.||+|.+..+++.||+|.+... ........+.+|+.+++.++||||+++++++...+..++|||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE--LDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME 79 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc--cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence 689999999999999999999999999999988643 233445778899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecCCccccC-----
Q 042772 387 FCPGGELFALLDKQP-MKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----- 459 (489)
Q Consensus 387 y~~ggsL~~~L~~~~-~~~l~e~~~~~i~~qI~~aL~yLH~-~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----- 459 (489)
|+++++|.+++.... ...+++..+..++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||++....
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAK 159 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccc
Confidence 999999999987631 2358999999999999999999996 599999999999999999999999999885321
Q ss_pred --------CCCce------------eecccccchHHHHHHHHhCCcccC
Q 042772 460 --------CKPQV------------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --------~~~~~------------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 208 (286)
T cd06622 160 TNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYP 208 (286)
T ss_pred cCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCC
Confidence 12322 234699999999999999999985
No 151
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.94 E-value=1.9e-26 Score=229.39 Aligned_cols=180 Identities=25% Similarity=0.350 Sum_probs=153.5
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
+++|++.+.||+|++|.||+|..+.+++.||+|.+..... ......+.+|+++++.++||||+++++++......++|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE--EGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc--cCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 4679999999999999999999998999999999875432 11223456799999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----- 459 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----- 459 (489)
|||++ ++|.+++..... .+++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||+++...
T Consensus 82 ~e~~~-~~L~~~~~~~~~-~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 159 (291)
T cd07844 82 FEYLD-TDLKQYMDDCGG-GLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT 159 (291)
T ss_pred EecCC-CCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCcc
Confidence 99997 599999876543 58999999999999999999999999999999999999999999999999875321
Q ss_pred ----------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~ 205 (291)
T cd07844 160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFP 205 (291)
T ss_pred ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 11221 123589999999999999999984
No 152
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.94 E-value=3.1e-26 Score=226.64 Aligned_cols=175 Identities=31% Similarity=0.522 Sum_probs=152.5
Q ss_pred cCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCCCH
Q 042772 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGEL 393 (489)
Q Consensus 314 LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ggsL 393 (489)
||+|+||+||+|.+..+|+.||+|.+.+...........+..|+.+++.++||||+++++++......|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999999999999999999765444444556677899999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--------------
Q 042772 394 FALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-------------- 459 (489)
Q Consensus 394 ~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-------------- 459 (489)
.+++.......+++..+..++.|++.||.|||+.|++|+||+|+||++++++.++|+|||++....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y 160 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGY 160 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCc
Confidence 999987654568999999999999999999999999999999999999999999999999885332
Q ss_pred CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 161 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 195 (277)
T cd05577 161 MAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFR 195 (277)
T ss_pred CCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCC
Confidence 11221 234699999999999999999984
No 153
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.94 E-value=3e-26 Score=226.67 Aligned_cols=179 Identities=26% Similarity=0.397 Sum_probs=156.7
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++++.||.|+||.||+|.+..++..+|+|.+... .......+..|+.+++.++||||+++++.+......|+||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 5699999999999999999999989999999998643 3445567888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
||+++++|.+++.... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++....
T Consensus 82 e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 160 (280)
T cd06611 82 EFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR 160 (280)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccccccc
Confidence 9999999999987643 358999999999999999999999999999999999999999999999999875321
Q ss_pred ---------CCCce-----------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ---------CKPQV-----------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------~~~~~-----------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|.+++++++|..||.
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~ 209 (280)
T cd06611 161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHH 209 (280)
T ss_pred ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcc
Confidence 11221 124699999999999999999984
No 154
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.94 E-value=1.6e-26 Score=245.47 Aligned_cols=176 Identities=21% Similarity=0.269 Sum_probs=144.6
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC------
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------ 378 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~------ 378 (489)
..+|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||++++++|...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 457999999999999999999999999999999885431 1234699999999999999999877432
Q ss_pred --CeEEEEEecCCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEEecC
Q 042772 379 --THICLITDFCPGGELFALLDK--QPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG-HVVLTDFD 453 (489)
Q Consensus 379 --~~~~lVmEy~~ggsL~~~L~~--~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g-~vKL~DFG 453 (489)
..+++||||++ ++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||
T Consensus 138 ~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 138 KNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred CceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 25789999996 578777753 2234589999999999999999999999999999999999998665 69999999
Q ss_pred CccccCC--------------CCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 454 LSFMTSC--------------KPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 454 lS~~~~~--------------~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+.... +|+. ....|+|++|++++++++|..||.
T Consensus 217 la~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~ 272 (440)
T PTZ00036 217 SAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFS 272 (440)
T ss_pred cchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 9964321 1222 223589999999999999999984
No 155
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.94 E-value=3.2e-26 Score=223.44 Aligned_cols=178 Identities=27% Similarity=0.401 Sum_probs=151.4
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
..+|++.+.||+|+||.||++.++. +..+|+|.+..... ....+..|+.+++.++||||+++++++......+++
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 77 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAM----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV 77 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCc----cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEE
Confidence 4579999999999999999998865 56799998764422 234677899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----- 459 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----- 459 (489)
|||+++|+|.+++.... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++...
T Consensus 78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05114 78 TEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT 156 (256)
T ss_pred EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence 99999999999997643 347899999999999999999999999999999999999999999999999886321
Q ss_pred -----------CCCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 460 -----------CKPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 460 -----------~~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++ |..||.
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~ 203 (256)
T cd05114 157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFE 203 (256)
T ss_pred ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCC
Confidence 11221 124589999999999998 898885
No 156
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.94 E-value=3.1e-26 Score=240.57 Aligned_cols=186 Identities=22% Similarity=0.268 Sum_probs=153.3
Q ss_pred ccccccCcccccccCCCCceEEEEEEEcCC-----CcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEE
Q 042772 301 EKIGLHHFKPIKPLGCGDTGSVHLVELQGA-----GELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYAS 374 (489)
Q Consensus 301 ~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~t-----g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~ 374 (489)
..+..++|++.+.||+|+||.||+|.+... +..||+|.+.... .....+.+.+|+.+++++. ||||++++++
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~ 109 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGA 109 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEE
Confidence 344567899999999999999999987543 3479999986542 2344567889999999996 9999999999
Q ss_pred EEeCCeEEEEEecCCCCCHHHHHhhCC-----------------------------------------------------
Q 042772 375 FQTSTHICLITDFCPGGELFALLDKQP----------------------------------------------------- 401 (489)
Q Consensus 375 ~~~~~~~~lVmEy~~ggsL~~~L~~~~----------------------------------------------------- 401 (489)
+.....+|+|||||++|+|.+++..+.
T Consensus 110 ~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 110 CTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred EccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 999999999999999999999886531
Q ss_pred -----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 042772 402 -----------------------------------------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENIL 440 (489)
Q Consensus 402 -----------------------------------------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NIL 440 (489)
...+++..+..++.|++.||.|||+++|+||||||+|||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nil 269 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEE
Confidence 123678888999999999999999999999999999999
Q ss_pred EecCCcEEEEecCCccccCC-----------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 441 LQKDGHVVLTDFDLSFMTSC-----------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 441 ld~~g~vKL~DFGlS~~~~~-----------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
++.++.+||+|||+++.... +|+. ...+|+|++|++++++++ |..||.
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~ 341 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYP 341 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCc
Confidence 99999999999999864211 1111 124589999999999985 888874
No 157
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.94 E-value=2.4e-26 Score=237.30 Aligned_cols=179 Identities=22% Similarity=0.367 Sum_probs=151.0
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC-----
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS----- 378 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~----- 378 (489)
..++|++.+.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 3578999999999999999999999999999999987543 2334456778899999999999999999987543
Q ss_pred -CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccc
Q 042772 379 -THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFM 457 (489)
Q Consensus 379 -~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~ 457 (489)
..+|+||||++ ++|.+.+.. .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 101 ~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 175 (364)
T cd07875 101 FQDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175 (364)
T ss_pred cCeEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccc
Confidence 35899999995 588887754 278899999999999999999999999999999999999999999999999864
Q ss_pred cCC--------------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 458 TSC--------------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 458 ~~~--------------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
... +|+. ...+|+|++|++++++++|..||.
T Consensus 176 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 226 (364)
T cd07875 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 226 (364)
T ss_pred cCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCC
Confidence 321 1111 234699999999999999999985
No 158
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.94 E-value=2.3e-26 Score=227.45 Aligned_cols=180 Identities=23% Similarity=0.331 Sum_probs=153.4
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++++.||+|++|.||+|.+..+++.||+|.+..... .......+..|+.+++.++||||+++++++..+...|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 48889999999999999999999999999999865422 22234567789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 387 FCPGGELFALLDKQP-MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 387 y~~ggsL~~~L~~~~-~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
|++ ++|.+++.... ...+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++....
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 158 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVY 158 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccc
Confidence 996 69999887643 2558999999999999999999999999999999999999999999999999875321
Q ss_pred ---------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ---------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~ 203 (285)
T cd07861 159 THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFH 203 (285)
T ss_pred cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 11222 223589999999999999998884
No 159
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.94 E-value=2.8e-27 Score=243.42 Aligned_cols=149 Identities=25% Similarity=0.376 Sum_probs=133.7
Q ss_pred cccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCC
Q 042772 310 PIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCP 389 (489)
Q Consensus 310 ~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ 389 (489)
..+.||+|.||+||-|.++.+|+.||+|++++-... .+....+++|+.||+.+.||.||.+...|++...+++|||-+
T Consensus 568 ~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp-~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl- 645 (888)
T KOG4236|consen 568 ADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFP-TKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL- 645 (888)
T ss_pred hHhhccCCcceeeecceecccCceeeeeeeecccCC-CchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-
Confidence 458899999999999999999999999999886653 444578899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC---CcEEEEecCCccccCC
Q 042772 390 GGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD---GHVVLTDFDLSFMTSC 460 (489)
Q Consensus 390 ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~---g~vKL~DFGlS~~~~~ 460 (489)
+|+..+.+-....+.+++....+++.||+.||.|||-++|+|+||||+|||+.+. -++||||||+|+.+..
T Consensus 646 ~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE 719 (888)
T KOG4236|consen 646 HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE 719 (888)
T ss_pred cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecch
Confidence 6677777766666779999999999999999999999999999999999999754 4899999999997763
No 160
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.94 E-value=4.3e-26 Score=223.69 Aligned_cols=181 Identities=24% Similarity=0.308 Sum_probs=153.9
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccc--cchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC--CeE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVM--LNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS--THI 381 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~ 381 (489)
.+|++.+.||+|+||.||.|.+..+++.||+|.+..... ........+.+|+.+++.++||||+++++++.+. ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 468999999999999999999999999999998864321 1234567888899999999999999999988763 468
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-- 459 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-- 459 (489)
+++|||+++++|.+++... ..+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||++....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI 159 (265)
T ss_pred EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence 8999999999999999865 347899999999999999999999999999999999999999999999999885321
Q ss_pred ----------------CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----------------CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----------------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 210 (265)
T cd06652 160 CLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWA 210 (265)
T ss_pred cccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCC
Confidence 11221 134599999999999999999984
No 161
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.94 E-value=2.5e-26 Score=225.69 Aligned_cols=179 Identities=23% Similarity=0.379 Sum_probs=153.4
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeC------
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTS------ 378 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~------ 378 (489)
+.|++.+.||+|+||.||+|....+++.||+|.+.... .....+..|+.+++.+ +||||+++++++...
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 46899999999999999999999999999999986542 2234677899999988 699999999998753
Q ss_pred CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcccc
Q 042772 379 THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~ 458 (489)
...|++|||+++++|.+++.......+++..+..++.|++.||.|||+++|+|+||||+||++++++.++|+|||++...
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 46899999999999999998765556899999999999999999999999999999999999999999999999998632
Q ss_pred C---------------CCCcee-----------ecccccchHHHHHHHHhCCcccC
Q 042772 459 S---------------CKPQVF-----------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 ~---------------~~~~~~-----------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
. .+|+.. ..+|+|++|++++++++|..||.
T Consensus 162 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~ 217 (272)
T cd06637 162 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC 217 (272)
T ss_pred ccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 1 112222 24799999999999999999984
No 162
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.94 E-value=6.2e-26 Score=224.82 Aligned_cols=177 Identities=27% Similarity=0.410 Sum_probs=154.3
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEec
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDF 387 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy 387 (489)
|++.+.||+|+||.||+|.+..++..+++|.+... .......+..|+.+++.++||||+++++++......++||||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 78899999999999999999999999999998653 234566788899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--------
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-------- 459 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-------- 459 (489)
+++++|..++.... ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++.+||+|||++....
T Consensus 84 ~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (282)
T cd06643 84 CAGGAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS 162 (282)
T ss_pred cCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccccc
Confidence 99999998876532 458999999999999999999999999999999999999999999999999885321
Q ss_pred -------CCCcee-----------ecccccchHHHHHHHHhCCcccC
Q 042772 460 -------CKPQVF-----------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 -------~~~~~~-----------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
..|+.. ..+|+|++|++++++++|..||.
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~ 209 (282)
T cd06643 163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHH 209 (282)
T ss_pred ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCcc
Confidence 112221 25799999999999999999984
No 163
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.94 E-value=7.4e-26 Score=220.62 Aligned_cols=179 Identities=24% Similarity=0.367 Sum_probs=156.4
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++.+.||.|+||.||+|....+++.+++|.+.... ....+.+..|+++++.++||||+++++++.....+|++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP---GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc---hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 47999999999999999999999999999999997542 235677888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
||+++++|.+++.... ..+++..+..++.|++.||.|||++|++|+||||+||++++++.+||+|||++....
T Consensus 80 e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 158 (262)
T cd06613 80 EYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKR 158 (262)
T ss_pred eCCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhcc
Confidence 9999999999987652 348999999999999999999999999999999999999999999999999875321
Q ss_pred ---------CCCcee---------ecccccchHHHHHHHHhCCcccC
Q 042772 460 ---------CKPQVF---------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------~~~~~~---------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+.. ..+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~ 205 (262)
T cd06613 159 KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMF 205 (262)
T ss_pred ccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCC
Confidence 112222 23589999999999999999984
No 164
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.94 E-value=5e-26 Score=223.76 Aligned_cols=181 Identities=23% Similarity=0.330 Sum_probs=154.0
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCc---EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGE---LYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~---~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 381 (489)
..+|++.+.||+|+||.||+|.++.++. .||+|.+.... .......+..|+.+++.++||||+++++++......
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 4568999999999999999999887664 69999986542 344567788999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC- 460 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~- 460 (489)
++||||+++++|.+++.... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 81 MIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 99999999999999997653 3488999999999999999999999999999999999999999999999998854221
Q ss_pred -------------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 -------------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 -------------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+. ...+|+|++|++++|+++ |..||.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~ 213 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 213 (269)
T ss_pred ccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCC
Confidence 1111 124589999999999775 999884
No 165
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.94 E-value=3.2e-26 Score=234.56 Aligned_cols=184 Identities=23% Similarity=0.319 Sum_probs=151.5
Q ss_pred ccccCcccccccCCCCceEEEEEEEcC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQG-----AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQ 376 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~-----tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~ 376 (489)
+..++|++.+.||+|+||.||+|...+ +++.||+|.+.... .....+.+..|+.++.++ +||||+++++++.
T Consensus 4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~ 81 (337)
T cd05054 4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGACT 81 (337)
T ss_pred cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence 344689999999999999999997543 45789999886432 234456778899999999 7999999999876
Q ss_pred e-CCeEEEEEecCCCCCHHHHHhhCCC-----------------------------------------------------
Q 042772 377 T-STHICLITDFCPGGELFALLDKQPM----------------------------------------------------- 402 (489)
Q Consensus 377 ~-~~~~~lVmEy~~ggsL~~~L~~~~~----------------------------------------------------- 402 (489)
. ...++++|||+++++|.+++.....
T Consensus 82 ~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 82 KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 5 4578999999999999999865321
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC----------------
Q 042772 403 ------KIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC---------------- 460 (489)
Q Consensus 403 ------~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~---------------- 460 (489)
..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 2578899999999999999999999999999999999999999999999999875321
Q ss_pred -CCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 461 -KPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 -~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+ ....+|+|++|++++++++ |..||.
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~ 277 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYP 277 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCC
Confidence 111 1223599999999999997 999984
No 166
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.94 E-value=4.7e-26 Score=222.96 Aligned_cols=181 Identities=25% Similarity=0.348 Sum_probs=155.0
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 382 (489)
+..++|++.+.||+|++|.||+|.+.. ++.||+|.+..... ..+.+.+|+.+++.++||||+++++++...+..+
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIY 77 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCee
Confidence 445679999999999999999999765 57899999865422 2356778999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC---
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS--- 459 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~--- 459 (489)
++|||+++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||++++++.+||+|||++....
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI 157 (261)
T ss_pred eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence 99999999999999987654568999999999999999999999999999999999999999999999999886432
Q ss_pred -------------CCCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 460 -------------CKPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 460 -------------~~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++ |..||.
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 206 (261)
T cd05068 158 YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYP 206 (261)
T ss_pred ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence 11222 124589999999999998 999884
No 167
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.94 E-value=5.9e-26 Score=224.43 Aligned_cols=180 Identities=23% Similarity=0.320 Sum_probs=153.5
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|+..+.||+|+||.||+|.++.+++.||+|.+..... .....+.+..|+.+++.++||||+++++++......++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 368999999999999999999999999999999865421 1223345678999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK---- 461 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~---- 461 (489)
||++++.|..++... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 157 (286)
T cd07847 80 EYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDY 157 (286)
T ss_pred eccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccc
Confidence 999988887776553 34899999999999999999999999999999999999999999999999998643211
Q ss_pred -----------Cc-------eeecccccchHHHHHHHHhCCcccC
Q 042772 462 -----------PQ-------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 -----------~~-------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+ ....+|+|++|++++++++|..||.
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~ 202 (286)
T cd07847 158 TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWP 202 (286)
T ss_pred cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCC
Confidence 11 1134689999999999999999984
No 168
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.94 E-value=5.5e-26 Score=221.95 Aligned_cols=182 Identities=26% Similarity=0.359 Sum_probs=156.6
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeE
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 381 (489)
+++.++|++.+.||+|+||.||+|.+.+ ++.+|+|.+..... ..+.+..|+.+++.++||||+++++++......
T Consensus 2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~~-~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05034 2 EIPRESLKLERKLGAGQFGEVWMGTWNG-TTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPI 76 (261)
T ss_pred ccchhheeeeeeeccCcceEEEEEEEcC-CceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCce
Confidence 3566789999999999999999999764 57899999875432 235678899999999999999999999988899
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC- 460 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~- 460 (489)
+++|||+++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.....
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred EEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 9999999999999999876555689999999999999999999999999999999999999999999999999864320
Q ss_pred ---------------CCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 461 ---------------KPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 ---------------~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.|+ ....+|+|++|++++++++ |..||.
T Consensus 157 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 206 (261)
T cd05034 157 EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYP 206 (261)
T ss_pred hhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 111 1234689999999999998 999884
No 169
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.94 E-value=3.8e-26 Score=223.24 Aligned_cols=178 Identities=27% Similarity=0.381 Sum_probs=151.1
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
..+|++.+.||+|+||.||+|.++. +..+|+|.+.+.... ...+..|+.+++.++||||+++++++......|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~~-~~~~~iK~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWRG-KIDVAIKMIREGAMS----EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEecC-CccEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEE
Confidence 3569999999999999999998864 668999988654321 24567799999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC---- 460 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~---- 460 (489)
|||+++++|.+++..... .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++....
T Consensus 78 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~ 156 (256)
T cd05059 78 TEYMANGCLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT 156 (256)
T ss_pred EecCCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccccc
Confidence 999999999999976543 589999999999999999999999999999999999999999999999998863211
Q ss_pred ------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 ------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 ------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++ |..||.
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~ 203 (256)
T cd05059 157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYE 203 (256)
T ss_pred ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCC
Confidence 1111 124689999999999997 888874
No 170
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.94 E-value=4.2e-26 Score=224.26 Aligned_cols=175 Identities=23% Similarity=0.281 Sum_probs=142.7
Q ss_pred cccCCCCceEEEEEEEcC--CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCC
Q 042772 312 KPLGCGDTGSVHLVELQG--AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCP 389 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~--tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ 389 (489)
+.||+|+||.||+|.... ....+++|.+.... .......+.+|+.+++.++||||+++++.+......++||||++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 368999999999997543 34578888765432 23344567889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-------
Q 042772 390 GGELFALLDKQPM---KIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------- 459 (489)
Q Consensus 390 ggsL~~~L~~~~~---~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------- 459 (489)
+|+|.+++..... ...++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 9999999977432 234678888999999999999999999999999999999999999999999985321
Q ss_pred ----------CCCce-------------eecccccchHHHHHHHHh-CCcccC
Q 042772 460 ----------CKPQV-------------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 460 ----------~~~~~-------------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++ |..||.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~ 211 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYP 211 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCC
Confidence 11221 124589999999999988 788874
No 171
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.94 E-value=3e-28 Score=231.25 Aligned_cols=181 Identities=28% Similarity=0.403 Sum_probs=157.0
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
.+.|.+.+.||+|.|+.||++.+..||+.+|+|+++......+ ..+.+.+|+.|.+.|+||||+++.+.+......|+|
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 4679999999999999999999999999999999987655443 678889999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC---CcEEEEecCCccccCC-
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD---GHVVLTDFDLSFMTSC- 460 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~---g~vKL~DFGlS~~~~~- 460 (489)
+|++.|++|..-+-.+ -.++|..+..++.||+.||.|+|.+||||||+||+|+|+.+. --+||+|||+|.....
T Consensus 89 Fe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g 166 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG 166 (355)
T ss_pred EecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCc
Confidence 9999999998666554 347999999999999999999999999999999999999533 3689999999975441
Q ss_pred --------CCc-----------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 --------KPQ-----------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 --------~~~-----------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.|. +-.+.|+|+.|++++.++.|++||-
T Consensus 167 ~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~ 213 (355)
T KOG0033|consen 167 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 213 (355)
T ss_pred cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCC
Confidence 122 2245589999999999999999983
No 172
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.94 E-value=4e-27 Score=244.18 Aligned_cols=173 Identities=28% Similarity=0.456 Sum_probs=148.1
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeE
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 381 (489)
++.++....++-||+|+.|.||+|+.. ++.||||.++.- -..++..|++|+||||+.|.++|....-+
T Consensus 120 eiPFe~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~el----------kETdIKHLRkLkH~NII~FkGVCtqsPcy 187 (904)
T KOG4721|consen 120 EIPFEEISELEWLGSGAQGAVFLGRLH--NETVAVKKVREL----------KETDIKHLRKLKHPNIITFKGVCTQSPCY 187 (904)
T ss_pred cCCHHHhhhhhhhccCcccceeeeecc--CceehhHHHhhh----------hhhhHHHHHhccCcceeeEeeeecCCcee
Confidence 344455566788999999999999987 688999976422 12367789999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-- 459 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-- 459 (489)
|||||||+.|.|...|+.. .++.......|..+|+.||.|||.+.|||||||.-||||..+..|||+|||.|+...
T Consensus 188 CIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ 265 (904)
T KOG4721|consen 188 CIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK 265 (904)
T ss_pred EEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh
Confidence 9999999999999999875 458899999999999999999999999999999999999999999999999987543
Q ss_pred ------C------CCceee------cccccchHHHHHHHHhCCcccC
Q 042772 460 ------C------KPQVFY------HAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ------~------~~~~~~------~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+ +|+++. ..|+|+||+.++||++|.+||-
T Consensus 266 STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYk 312 (904)
T KOG4721|consen 266 STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYK 312 (904)
T ss_pred hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCcc
Confidence 2 223222 2389999999999999999994
No 173
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.94 E-value=9.3e-26 Score=221.22 Aligned_cols=180 Identities=25% Similarity=0.288 Sum_probs=149.0
Q ss_pred cccccccCCCCceEEEEEEEcC---CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCe----
Q 042772 308 FKPIKPLGCGDTGSVHLVELQG---AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTH---- 380 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~---tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~---- 380 (489)
|++.+.||+|+||.||+|.... ++..||+|.+..... .......+..|+.+++.++||||+++++.+.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 5788999999999999999764 347899999875432 33456778899999999999999999998765443
Q ss_pred --EEEEEecCCCCCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCC
Q 042772 381 --ICLITDFCPGGELFALLDKQ----PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454 (489)
Q Consensus 381 --~~lVmEy~~ggsL~~~L~~~----~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGl 454 (489)
.+++|||+++|+|..++... ....+++..+..++.|++.||.|||+++++||||||+||++++++.+||+|||+
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence 79999999999999998543 223589999999999999999999999999999999999999999999999999
Q ss_pred ccccCC-----------------CCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 455 SFMTSC-----------------KPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 455 S~~~~~-----------------~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
++.... +|+ ....+|+|++|++++|+++ |..||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~ 217 (273)
T cd05035 160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYP 217 (273)
T ss_pred eeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 864321 111 1134699999999999998 888874
No 174
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.94 E-value=8.2e-26 Score=221.44 Aligned_cols=180 Identities=28% Similarity=0.431 Sum_probs=154.7
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccc------hHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN------RNKVHRACIEREIMSLLDHPFLPTLYASFQTSTH 380 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~------~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 380 (489)
+|.+...||.|+||.||+|.+..+++.+|+|.+....... ......+..|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4778899999999999999999889999999886543221 2234678889999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC 460 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~ 460 (489)
.+++|||+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEA 158 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence 99999999999999999775 3488999999999999999999999999999999999999999999999998764431
Q ss_pred ---------------------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 ---------------------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---------------------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ ....+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 213 (267)
T cd06628 159 NSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFP 213 (267)
T ss_pred ccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCC
Confidence 111 1134699999999999999999985
No 175
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.94 E-value=8.9e-26 Score=223.39 Aligned_cols=182 Identities=22% Similarity=0.331 Sum_probs=151.9
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCc----EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGE----LYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS 378 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~----~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 378 (489)
+...+|++.+.||+|+||+||+|.+..+++ .||+|.+.... .......+..|..+++.+.||||+++++++...
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 81 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLTS 81 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC
Confidence 345689999999999999999999877776 48999886432 334456788899999999999999999988754
Q ss_pred CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcccc
Q 042772 379 THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~ 458 (489)
..+++|||+++|+|.+++.... ..+++..+..++.|++.||.|||+++++||||||+|||++.++.+||+|||+++..
T Consensus 82 -~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 82 -TVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred -CcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeec
Confidence 5789999999999999997643 34899999999999999999999999999999999999999999999999998643
Q ss_pred CC-----------------CCcee------ecccccchHHHHHHHHh-CCcccC
Q 042772 459 SC-----------------KPQVF------YHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 459 ~~-----------------~~~~~------~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.. +|+.. ..+|+|++|++++|+++ |..||.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 213 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYD 213 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 21 12211 23489999999999887 888885
No 176
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.94 E-value=5.7e-26 Score=223.77 Aligned_cols=184 Identities=19% Similarity=0.227 Sum_probs=153.7
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCC-----CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGA-----GELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT 377 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~t-----g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 377 (489)
+..++|++.+.||+|+||.||+|.++.. +..||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 80 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVST 80 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC
Confidence 4567899999999999999999998754 3789999986442 23345667889999999999999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEE
Q 042772 378 STHICLITDFCPGGELFALLDKQP--------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVL 449 (489)
Q Consensus 378 ~~~~~lVmEy~~ggsL~~~L~~~~--------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL 449 (489)
....++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+.+++||||||+||+++.++.+||
T Consensus 81 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 81 GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEE
Confidence 999999999999999999997532 123678889999999999999999999999999999999999999999
Q ss_pred EecCCccccCC-----------------CCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 450 TDFDLSFMTSC-----------------KPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 450 ~DFGlS~~~~~-----------------~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|||+++.... +|+ ....+|+|++|++++++++ |..||.
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 223 (277)
T cd05032 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQ 223 (277)
T ss_pred CCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCc
Confidence 99998753210 111 1233589999999999997 888884
No 177
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.94 E-value=8e-26 Score=224.17 Aligned_cols=177 Identities=27% Similarity=0.378 Sum_probs=148.8
Q ss_pred Cc-ccccccCCCCceEEEEEEE----cCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC--C
Q 042772 307 HF-KPIKPLGCGDTGSVHLVEL----QGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS--T 379 (489)
Q Consensus 307 ~y-~~~~~LG~G~fG~Vy~a~~----~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~ 379 (489)
+| ++++.||+|+||+||++.. ..++..||+|.+.... .......+.+|+++++.++||||+++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK 81 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence 45 8999999999999988753 3567899999986542 233456778899999999999999999987653 4
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
.++++|||+++++|.+++... .+++..+..++.|++.||.|||++|++||||||+|||+++++.+||+|||++....
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred eEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 689999999999999999764 38999999999999999999999999999999999999999999999999986432
Q ss_pred C------------------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 C------------------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ~------------------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
. +|+ ....+|+|++|++++++++|+.||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~ 211 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQ 211 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCC
Confidence 1 111 1234599999999999999999874
No 178
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.94 E-value=5.8e-26 Score=224.07 Aligned_cols=182 Identities=21% Similarity=0.272 Sum_probs=154.1
Q ss_pred ccCcccccccCCCCceEEEEEEEcC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQG-----AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST 379 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~-----tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 379 (489)
..+|.+.+.||+|+||.||+|.... +++.||+|.++... .....+.+.+|+++++.++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 4579999999999999999998753 36789999986542 2334578889999999999999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcE
Q 042772 380 HICLITDFCPGGELFALLDKQP------------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHV 447 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~------------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~v 447 (489)
..+++|||+++++|.+++.... ...+++..+..++.|++.||.|||++|++||||||+||+++.++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeE
Confidence 9999999999999999997642 2347888999999999999999999999999999999999999999
Q ss_pred EEEecCCccccC-----------------CCCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 448 VLTDFDLSFMTS-----------------CKPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 448 KL~DFGlS~~~~-----------------~~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
||+|||++.... .+|+. ...+|+|++|++++++++ |..||.
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~ 226 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWY 226 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCC
Confidence 999999986321 11221 123599999999999997 999873
No 179
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.94 E-value=9e-26 Score=220.05 Aligned_cols=179 Identities=23% Similarity=0.372 Sum_probs=155.3
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEE
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 383 (489)
...+|++.+.||.|+||.||+|... |+.||+|.+..... ..+++..|+.+++.++||||+++++++......++
T Consensus 4 ~~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 77 (256)
T cd05039 4 NSKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYI 77 (256)
T ss_pred ChhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEE
Confidence 4568999999999999999999875 78899999865421 46778889999999999999999999998899999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC----
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS---- 459 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~---- 459 (489)
||||+++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~ 157 (256)
T cd05039 78 VTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD 157 (256)
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccc
Confidence 9999999999999987654468999999999999999999999999999999999999999999999999886432
Q ss_pred --------CCCcee------ecccccchHHHHHHHHh-CCcccC
Q 042772 460 --------CKPQVF------YHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 460 --------~~~~~~------~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.+|+.. ..+|+|++|++++++++ |..||.
T Consensus 158 ~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~ 201 (256)
T cd05039 158 SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 201 (256)
T ss_pred cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCC
Confidence 112221 24589999999999986 999885
No 180
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.94 E-value=5.4e-26 Score=223.15 Aligned_cols=182 Identities=22% Similarity=0.289 Sum_probs=154.0
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCc---EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCe
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGE---LYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTH 380 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~---~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 380 (489)
..++|+..+.||+|+||.||+|..+.++. .+|+|.+.... .....+.+..|+.+++.++||||+++.+++.....
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP 80 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCC
Confidence 34578999999999999999999876554 79999886542 23345678889999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC 460 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~ 460 (489)
.++||||+++++|.+++.... ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++.+||+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999999997643 3488999999999999999999999999999999999999999999999999864321
Q ss_pred ------------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 ------------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 ------------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++ |..||.
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~ 212 (268)
T cd05063 160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYW 212 (268)
T ss_pred ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCC
Confidence 1111 123489999999999886 999984
No 181
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.94 E-value=6.1e-26 Score=222.98 Aligned_cols=179 Identities=24% Similarity=0.341 Sum_probs=150.2
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEE
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 383 (489)
..++|++.+.||+|+||.||+|.+..+ ..||+|.+.+... ....+.+|+++++.++||||+++++.+. ....++
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~l 77 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYI 77 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEE
Confidence 446799999999999999999998765 4599999875322 2246788999999999999999998774 456899
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC---
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC--- 460 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~--- 460 (489)
||||+++|+|.+++.......+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence 99999999999999875445578999999999999999999999999999999999999999999999999864321
Q ss_pred -------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 -------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 -------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.|+. ...+|+|++|++++++++ |..||.
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~ 205 (262)
T cd05071 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 205 (262)
T ss_pred ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 1111 124689999999999998 888874
No 182
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.94 E-value=7.9e-26 Score=225.08 Aligned_cols=185 Identities=22% Similarity=0.360 Sum_probs=155.2
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCC-----CcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEE
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGA-----GELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASF 375 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~t-----g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~ 375 (489)
.+..++|++.+.||+|+||.||++..... ...+|+|.+.... .......+.+|+.+++++ +||||+++++++
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 45567899999999999999999998744 3789999886542 233456688899999999 799999999999
Q ss_pred EeCCeEEEEEecCCCCCHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE
Q 042772 376 QTSTHICLITDFCPGGELFALLDKQ--------------PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILL 441 (489)
Q Consensus 376 ~~~~~~~lVmEy~~ggsL~~~L~~~--------------~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILl 441 (489)
.....++++|||+++|+|.+++... ....+++..+..++.|++.||.|||+++|+||||||+|||+
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~ 165 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV 165 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE
Confidence 9999999999999999999999652 23458899999999999999999999999999999999999
Q ss_pred ecCCcEEEEecCCccccC-----------------CCCcee------ecccccchHHHHHHHHh-CCcccC
Q 042772 442 QKDGHVVLTDFDLSFMTS-----------------CKPQVF------YHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 442 d~~g~vKL~DFGlS~~~~-----------------~~~~~~------~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+.++.+||+|||+++... .+|+.. ..+|+|++|++++++++ |..||.
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 236 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 236 (293)
T ss_pred cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCC
Confidence 999999999999986422 112221 23599999999999886 988875
No 183
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.94 E-value=7.2e-26 Score=221.71 Aligned_cols=180 Identities=23% Similarity=0.314 Sum_probs=154.4
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccc---hHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN---RNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 383 (489)
+|+..+.||+|+||.||++....+++.||+|.+....... ....+.+..|+.+++.++||||+++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4788899999999999999999999999999997543221 2345788899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEEecCCccccCC--
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG-HVVLTDFDLSFMTSC-- 460 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g-~vKL~DFGlS~~~~~-- 460 (489)
||||+++++|.+++.+. ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++ .+||+|||++.....
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 99999999999999765 3488999999999999999999999999999999999998776 599999999754321
Q ss_pred -----------------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 -----------------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -----------------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ ....+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~ 209 (268)
T cd06630 159 TGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWN 209 (268)
T ss_pred ccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCC
Confidence 111 1134589999999999999999984
No 184
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.94 E-value=6.3e-26 Score=225.83 Aligned_cols=179 Identities=23% Similarity=0.329 Sum_probs=152.0
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
.+|++.+.||+|+||.||+|....++..||+|.+..... ......+.+|+.+++.++|+||+++++++......|+||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 579999999999999999999999999999999865422 222335567999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
||+. ++|.+++.... ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++.+||+|||+++...
T Consensus 83 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 160 (291)
T cd07870 83 EYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTY 160 (291)
T ss_pred eccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCC
Confidence 9995 78888876543 347888899999999999999999999999999999999999999999999886321
Q ss_pred ---------CCCcee-------ecccccchHHHHHHHHhCCcccC
Q 042772 460 ---------CKPQVF-------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------~~~~~~-------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+.. ...|+|++|++++++++|..||.
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~ 205 (291)
T cd07870 161 SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFP 205 (291)
T ss_pred CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 123322 23599999999999999999984
No 185
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.94 E-value=8.3e-26 Score=226.53 Aligned_cols=177 Identities=23% Similarity=0.346 Sum_probs=154.5
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
.+|++.+.||+|+||.||+|.+..+++.||+|.+..... .....+..|+.+++.+.||||+++++.+......|+||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 579999999999999999999999999999999875432 23466788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
||+++++|.+++... .+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++....
T Consensus 97 e~~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 173 (296)
T cd06654 97 EYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173 (296)
T ss_pred cccCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccccccc
Confidence 999999999998753 37899999999999999999999999999999999999999999999999875321
Q ss_pred ---------CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ---------CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 174 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~ 217 (296)
T cd06654 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 217 (296)
T ss_pred CcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCC
Confidence 01221 134599999999999999999985
No 186
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.94 E-value=1e-25 Score=224.02 Aligned_cols=174 Identities=34% Similarity=0.553 Sum_probs=144.1
Q ss_pred ccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHH---hCCCCCcceeeEEEEeCCeEEEEEecCC
Q 042772 313 PLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS---LLDHPFLPTLYASFQTSTHICLITDFCP 389 (489)
Q Consensus 313 ~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~---~l~HpnIv~l~~~~~~~~~~~lVmEy~~ 389 (489)
.||+|+||.||++.+..+++.+|+|.+.+..............|..+++ ..+||||+.+++.+...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999999999999999997654433332333344444433 3479999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC----------
Q 042772 390 GGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS---------- 459 (489)
Q Consensus 390 ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~---------- 459 (489)
+++|.+++..+ ..+++..+..++.|++.||.|||+++++||||||+|||+++++.++|+|||++....
T Consensus 81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (279)
T cd05633 81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (279)
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCC
Confidence 99999998765 348999999999999999999999999999999999999999999999999985321
Q ss_pred ---CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ---CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 197 (279)
T cd05633 159 HGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFR 197 (279)
T ss_pred cCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcC
Confidence 11221 234599999999999999999984
No 187
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.94 E-value=1e-25 Score=220.00 Aligned_cols=181 Identities=29% Similarity=0.389 Sum_probs=156.8
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++.+.||.|+||+||+|....++..+|+|.+...... ...+.+.+|+.+++.++||||+++++.+......+++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ--TSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc--hHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 3689999999999999999999989999999998754332 25677889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC----
Q 042772 386 DFCPGGELFALLDKQPM-KIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC---- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~-~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~---- 460 (489)
|++++++|.+++..... ..+++..+..++.|++.||.|||++|++|+||||+||++++++.++|+|||++.....
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 99999999999976422 4589999999999999999999999999999999999999999999999998753221
Q ss_pred ---------------CCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ---------------KPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---------------~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~ 208 (267)
T cd06610 159 TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYS 208 (267)
T ss_pred cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCcc
Confidence 1221 123599999999999999999984
No 188
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.94 E-value=9.6e-26 Score=222.90 Aligned_cols=183 Identities=18% Similarity=0.195 Sum_probs=150.8
Q ss_pred cccCcccccccCCCCceEEEEEEEcC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQG-----AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS 378 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~-----tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 378 (489)
..++|++.+.||+|+||.||+|.+++ ++..||+|.+.... .......+..|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 44679999999999999999998753 35689999885432 233445678899999999999999999999988
Q ss_pred CeEEEEEecCCCCCHHHHHhhCCC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEE
Q 042772 379 THICLITDFCPGGELFALLDKQPM--------KIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLT 450 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~~~--------~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~ 450 (489)
...++||||+++++|.+++..... ..++...+..++.|++.||.|||+.|++|+||||+||++++++.++|+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~ 161 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG 161 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEEC
Confidence 999999999999999999875321 235678889999999999999999999999999999999999999999
Q ss_pred ecCCccccC-----------------CCCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 451 DFDLSFMTS-----------------CKPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 451 DFGlS~~~~-----------------~~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
|||++.... .+|+. ...+|+|++|++++++++ |..||.
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~ 223 (277)
T cd05062 162 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 223 (277)
T ss_pred CCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 999985321 11221 123589999999999997 788874
No 189
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.94 E-value=9.3e-26 Score=223.91 Aligned_cols=181 Identities=20% Similarity=0.311 Sum_probs=148.8
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCc----EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGE----LYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST 379 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~----~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 379 (489)
..++|++.+.||.|+||.||+|.+..+++ .+++|.+... ........+..|+.+++.++||||+++++++.. .
T Consensus 5 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~ 81 (279)
T cd05111 5 KETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-A 81 (279)
T ss_pred CHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-C
Confidence 44679999999999999999999987776 4666766432 223445667778888999999999999998754 4
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
..++++||+++|+|.+++.... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++...
T Consensus 82 ~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 82 SLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred ccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 5789999999999999997653 348999999999999999999999999999999999999999999999999986431
Q ss_pred C-----------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 460 C-----------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 460 ~-----------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
. +|+. ...+|+|++|++++|+++ |..||.
T Consensus 161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~ 213 (279)
T cd05111 161 PDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYA 213 (279)
T ss_pred CCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 1 1111 123589999999999987 999884
No 190
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.94 E-value=8.1e-26 Score=221.15 Aligned_cols=180 Identities=25% Similarity=0.376 Sum_probs=152.6
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 382 (489)
+..++|++++.||+|+||.||+|..+. ++.||+|.+..... ....+..|+.+++.++||||+++++++. ....+
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~-~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYYNG-HTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIY 76 (260)
T ss_pred cchHHceeeeeeccCccceEEeeecCC-CceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcE
Confidence 445679999999999999999998664 67899999875432 2356778999999999999999998764 55789
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC---
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS--- 459 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~--- 459 (489)
++|||+++++|.+++.......+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCC
Confidence 99999999999999987655668999999999999999999999999999999999999999999999999985432
Q ss_pred -------------CCCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 460 -------------CKPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 460 -------------~~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.+|+ .....|+|++|++++++++ |..||.
T Consensus 157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 205 (260)
T cd05067 157 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYP 205 (260)
T ss_pred cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCC
Confidence 0111 1234699999999999998 999984
No 191
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.94 E-value=1.8e-25 Score=217.60 Aligned_cols=181 Identities=24% Similarity=0.463 Sum_probs=157.3
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++.+.||+|+||.||++....+++.||+|.+..... .......+.+|+.+++.++||||+++++++......++|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 48899999999999999999999999999999875433 23345678889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------ 460 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------ 460 (489)
|+++++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.....
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR 159 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence 99999999999875544578999999999999999999999999999999999999999999999999864321
Q ss_pred ---------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ---------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~ 202 (256)
T cd08218 160 TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFE 202 (256)
T ss_pred hccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCcc
Confidence 1111 134699999999999999999985
No 192
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.94 E-value=1.4e-25 Score=219.40 Aligned_cols=173 Identities=36% Similarity=0.675 Sum_probs=152.7
Q ss_pred cCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCCCH
Q 042772 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGEL 393 (489)
Q Consensus 314 LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ggsL 393 (489)
||.|+||.||+|.+..+++.+|+|.+.+.........+.+..|+.+++.++||||+++++.+.+....+++|||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 68999999999999999999999999876554455567888999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC------------
Q 042772 394 FALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK------------ 461 (489)
Q Consensus 394 ~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~------------ 461 (489)
.+++.+. ..+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~ 158 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEY 158 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCc
Confidence 9999875 34899999999999999999999999999999999999999999999999998654321
Q ss_pred --Cce------eecccccchHHHHHHHHhCCcccC
Q 042772 462 --PQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 --~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+. ...+|+|++|.+++++++|..||.
T Consensus 159 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 193 (262)
T cd05572 159 VAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFG 193 (262)
T ss_pred cChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcC
Confidence 211 123589999999999999999985
No 193
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.94 E-value=1.5e-25 Score=218.62 Aligned_cols=179 Identities=27% Similarity=0.443 Sum_probs=157.5
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++.+.||+|+||.||+|....+++.|++|.+...... ......+..|+++++.++||||+++++.+......++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 588899999999999999999989999999999765432 4567889999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------ 460 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------ 460 (489)
|+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||++.....
T Consensus 80 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 157 (264)
T cd06626 80 YCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG 157 (264)
T ss_pred cCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence 99999999999775 3478999999999999999999999999999999999999999999999998864321
Q ss_pred -------------CCc---------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 -------------KPQ---------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -------------~~~---------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ ....+|+|++|.+++++++|..||.
T Consensus 158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~ 207 (264)
T cd06626 158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWS 207 (264)
T ss_pred ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCcc
Confidence 111 2234589999999999999999985
No 194
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.94 E-value=9.4e-26 Score=226.25 Aligned_cols=177 Identities=23% Similarity=0.342 Sum_probs=154.1
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
.+|++++.||+|+||.||+|....+++.||+|.+.... ......+..|+.+++.++||||+++++++......|+||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc---cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 67999999999999999999999999999999986542 223456778999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
||+++++|.+++... .+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++.....
T Consensus 96 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~ 172 (297)
T cd06656 96 EYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 172 (297)
T ss_pred cccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCc
Confidence 999999999998753 378999999999999999999999999999999999999999999999998754321
Q ss_pred ----------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ----------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ----------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.|+. ....|+|++|++++++++|..||.
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~ 216 (297)
T cd06656 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYL 216 (297)
T ss_pred CcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 1111 123589999999999999999984
No 195
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.94 E-value=1.7e-25 Score=217.71 Aligned_cols=181 Identities=24% Similarity=0.429 Sum_probs=154.9
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe-CCeEEEEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT-STHICLIT 385 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~~lVm 385 (489)
.|++.+.||.|++|.||++.++.+++.||+|.+..... .....+.+..|+.+++.++|||++++++.+.. ...+|++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 48899999999999999999999999999999865432 33445678889999999999999999998764 44689999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
||+++++|.+++.......+++.++..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.....
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~ 159 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMA 159 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCcc
Confidence 999999999999876555689999999999999999999999999999999999999999999999998854321
Q ss_pred ----------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ----------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ----------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~ 203 (257)
T cd08223 160 STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFN 203 (257)
T ss_pred ccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence 1221 124599999999999999999885
No 196
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.94 E-value=7.1e-26 Score=221.75 Aligned_cols=178 Identities=25% Similarity=0.361 Sum_probs=151.2
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
.++|++.+.||+|+||.||+|.+.. +..+|+|.+..... ....+..|+.+++.++||||+++++++......+++
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEE
Confidence 3579999999999999999998765 45699998865422 235678899999999999999999999988899999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC---- 460 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~---- 460 (489)
|||+++|+|.+++..... .+++..+..++.|++.||.|||+.|++|+||||+||+++.++.+||+|||++.....
T Consensus 78 ~e~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05113 78 TEYMSNGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT 156 (256)
T ss_pred EEcCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCcee
Confidence 999999999999976533 589999999999999999999999999999999999999999999999998763221
Q ss_pred ------------CCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 461 ------------KPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 ------------~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+ ....+|+|++|++++++++ |..||.
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~ 203 (256)
T cd05113 157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYE 203 (256)
T ss_pred ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcC
Confidence 111 1234689999999999987 999885
No 197
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.94 E-value=8.1e-26 Score=225.56 Aligned_cols=179 Identities=24% Similarity=0.315 Sum_probs=152.9
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeeccccc--chHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVML--NRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
+|++.+.||.|+||.||+|.+..+++.||+|.+...... .......+..|+++++.++||||+++++++.+....++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 478889999999999999999999999999999765432 122345567799999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC---
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK--- 461 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~--- 461 (489)
|||+ +++|.+++.... ..+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK 158 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence 9999 899999998754 35899999999999999999999999999999999999999999999999998643211
Q ss_pred ------------Cce-------eecccccchHHHHHHHHhCCccc
Q 042772 462 ------------PQV-------FYHAHVNGFYFIMYKWLTGYFTY 487 (489)
Q Consensus 462 ------------~~~-------~~~~~v~s~g~~a~e~~~G~lpY 487 (489)
|+. ....|+|++|++++++++|..+|
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~ 203 (298)
T cd07841 159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFL 203 (298)
T ss_pred ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccc
Confidence 111 12358899999999999997665
No 198
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.94 E-value=1.2e-25 Score=223.96 Aligned_cols=182 Identities=25% Similarity=0.365 Sum_probs=153.0
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCC----------------cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCc
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAG----------------ELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFL 368 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg----------------~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnI 368 (489)
..+|++++.||+|+||.||+|.+..++ ..||+|.+.... .......+.+|+.+++.++||||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhcCCCCE
Confidence 457999999999999999999876543 568999887542 23456778899999999999999
Q ss_pred ceeeEEEEeCCeEEEEEecCCCCCHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 042772 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQP---------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENI 439 (489)
Q Consensus 369 v~l~~~~~~~~~~~lVmEy~~ggsL~~~L~~~~---------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NI 439 (489)
+++++++......+++|||+++++|.+++.... ...+++..+..++.|++.||.|||++|++||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni 161 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC 161 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence 999999999999999999999999999997653 12589999999999999999999999999999999999
Q ss_pred EEecCCcEEEEecCCccccC-----------------CCCce------eecccccchHHHHHHHHh--CCcccC
Q 042772 440 LLQKDGHVVLTDFDLSFMTS-----------------CKPQV------FYHAHVNGFYFIMYKWLT--GYFTYV 488 (489)
Q Consensus 440 Lld~~g~vKL~DFGlS~~~~-----------------~~~~~------~~~~~v~s~g~~a~e~~~--G~lpY~ 488 (489)
+++.++.++|+|||++.... .+|+. ...+|+|++|++++++++ |..||.
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred eecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 99999999999999986421 01221 234689999999999987 666663
No 199
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=9.3e-27 Score=252.59 Aligned_cols=185 Identities=23% Similarity=0.327 Sum_probs=158.7
Q ss_pred cccccCcccccccCCCCceEEEEEEEcC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEE
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQG-----AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQ 376 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~-----tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~ 376 (489)
.+...+....+.||+|.||+||+|+..+ ....||||.++.. .+.+..++|.+|++++..++|||||+|+|+|.
T Consensus 482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~--a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~ 559 (774)
T KOG1026|consen 482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK--AENQARQDFRREAELLAELQHPNIVRLLGVCR 559 (774)
T ss_pred EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc--ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence 4566778889999999999999998653 3468999999754 34446789999999999999999999999999
Q ss_pred eCCeEEEEEecCCCCCHHHHHhhC--------C----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC
Q 042772 377 TSTHICLITDFCPGGELFALLDKQ--------P----MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD 444 (489)
Q Consensus 377 ~~~~~~lVmEy~~ggsL~~~L~~~--------~----~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~ 444 (489)
..+.+|+|+|||..|+|.++|... . ..+|+..+.+.|+.||+.||.||-++.+|||||..+|+||.++
T Consensus 560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc
Confidence 999999999999999999999752 1 2238899999999999999999999999999999999999999
Q ss_pred CcEEEEecCCccccCC-----------------------CCceeecccccchHHHHHHH-HhCCcccC
Q 042772 445 GHVVLTDFDLSFMTSC-----------------------KPQVFYHAHVNGFYFIMYKW-LTGYFTYV 488 (489)
Q Consensus 445 g~vKL~DFGlS~~~~~-----------------------~~~~~~~~~v~s~g~~a~e~-~~G~lpY~ 488 (489)
-.|||+|||+|+.... .......+|||+||+.++|+ ..|..||.
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~ 707 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYY 707 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccc
Confidence 9999999999975431 12223456999999999996 68999984
No 200
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.94 E-value=1.5e-25 Score=222.01 Aligned_cols=178 Identities=26% Similarity=0.401 Sum_probs=148.3
Q ss_pred cCcccccccCCCCceEEEEEEE----cCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe--CC
Q 042772 306 HHFKPIKPLGCGDTGSVHLVEL----QGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT--ST 379 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~----~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--~~ 379 (489)
.+|++++.||+|+||.||+|.. ..++..||+|.+... .....+.+..|+++++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 4799999999999999999984 456889999998654 34455778899999999999999999997653 34
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
.+++||||+++++|.+++.... ..+++..+..++.|++.||.|||++|++||||||+||++++++.+||+|||++....
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 6899999999999999997643 347899999999999999999999999999999999999999999999999987532
Q ss_pred CC------------------Cc------eeecccccchHHHHHHHHhCCccc
Q 042772 460 CK------------------PQ------VFYHAHVNGFYFIMYKWLTGYFTY 487 (489)
Q Consensus 460 ~~------------------~~------~~~~~~v~s~g~~a~e~~~G~lpY 487 (489)
.. |+ .....|+|++|++++|+++|..++
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~ 211 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKS 211 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcC
Confidence 11 11 112348889999999998876553
No 201
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.94 E-value=1.2e-25 Score=225.02 Aligned_cols=181 Identities=22% Similarity=0.316 Sum_probs=151.2
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCc--EEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGE--LYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~--~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ 382 (489)
++|++.+.||+|+||.||+|..+.++. .+++|.++.. ......+.+..|+.++.++ +||||+++++++.....+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 469999999999999999999887764 4688877532 2334456788899999999 7999999999999989999
Q ss_pred EEEecCCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEE
Q 042772 383 LITDFCPGGELFALLDKQP--------------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV 448 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~--------------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vK 448 (489)
++|||+++++|.+++.... ...+++..+..++.|++.||+|||++|++||||||+|||++.++.+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence 9999999999999997532 12478899999999999999999999999999999999999999999
Q ss_pred EEecCCccccC--------------CCCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 449 LTDFDLSFMTS--------------CKPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 449 L~DFGlS~~~~--------------~~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
|+|||++.... .+|+. ...+|+|++|++++++++ |..||.
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~ 220 (297)
T cd05089 160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYC 220 (297)
T ss_pred ECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 99999984211 11221 234699999999999996 999984
No 202
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.94 E-value=1.1e-25 Score=226.57 Aligned_cols=184 Identities=22% Similarity=0.327 Sum_probs=154.7
Q ss_pred ccccCcccccccCCCCceEEEEEEEc-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQ-----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQ 376 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~-----~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~ 376 (489)
+..++|.+.+.||+|+||.||+|.+. .++..+|+|.++... .......+..|+.+++++ +||||+++++++.
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 109 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGACT 109 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEEe
Confidence 44567999999999999999999853 345689999886542 234456788899999999 7999999999999
Q ss_pred eCCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcc
Q 042772 377 TSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSF 456 (489)
Q Consensus 377 ~~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~ 456 (489)
..+..+++|||+++|+|.+++.......+++..+..++.|++.||.|||+++|+|+||||+|||++.++.++|+|||++.
T Consensus 110 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 110 IGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred cCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccc
Confidence 99999999999999999999986544448999999999999999999999999999999999999999999999999986
Q ss_pred ccCCC-----------------Cce------eecccccchHHHHHHHHh-CCcccC
Q 042772 457 MTSCK-----------------PQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 457 ~~~~~-----------------~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
..... |+. ...+|+|++|++++++++ |..||.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~ 245 (302)
T cd05055 190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYP 245 (302)
T ss_pred cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcC
Confidence 43211 111 123489999999999987 988874
No 203
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.94 E-value=1.6e-25 Score=221.46 Aligned_cols=180 Identities=23% Similarity=0.330 Sum_probs=153.0
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCc----EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCe
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGE----LYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTH 380 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~----~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 380 (489)
..+|++.+.||+|+||.||+|.++.+|. .+|+|.+.... .......+.+|+.+++.++||||+++++++.. ..
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET--SPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cc
Confidence 4679999999999999999999877664 68999876543 24455678889999999999999999999887 78
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC 460 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~ 460 (489)
.+++|||+++|+|.+++.... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++....
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred eEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 999999999999999998753 3489999999999999999999999999999999999999999999999999864321
Q ss_pred -----------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 -----------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 -----------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.|+. ...+|+|++|++++++++ |..||.
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 213 (279)
T cd05057 162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYE 213 (279)
T ss_pred cccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCC
Confidence 1111 123588999999999997 999985
No 204
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.94 E-value=1.3e-25 Score=223.64 Aligned_cols=184 Identities=17% Similarity=0.197 Sum_probs=150.2
Q ss_pred ccccCcccccccCCCCceEEEEEEEcC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQG-----AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT 377 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~-----tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 377 (489)
+..++|++.+.||+|+||.||+|..+. .+..||+|.++... .......+.+|..+++.++||||+++++++..
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 80 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGVVSK 80 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 456789999999999999999997653 35689999886442 22334567789999999999999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEE
Q 042772 378 STHICLITDFCPGGELFALLDKQP--------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVL 449 (489)
Q Consensus 378 ~~~~~lVmEy~~ggsL~~~L~~~~--------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL 449 (489)
....|+||||+++|+|.+++.... ...++...+..++.|++.||.|||+++|+||||||+||+++.++.++|
T Consensus 81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 81 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEE
Confidence 899999999999999999997531 123466788899999999999999999999999999999999999999
Q ss_pred EecCCccccCC-----------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 450 TDFDLSFMTSC-----------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 450 ~DFGlS~~~~~-----------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|||+++.... +|+. ...+|+|++|++++++++ |..||.
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~ 223 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 223 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCC
Confidence 99999863210 1111 123488999999999987 777773
No 205
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.94 E-value=2.2e-25 Score=219.02 Aligned_cols=180 Identities=25% Similarity=0.328 Sum_probs=153.6
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeeccccc--chHHHHHHHHHHHHHHhCCCCCcceeeEEEEe--CCeEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVML--NRNKVHRACIEREIMSLLDHPFLPTLYASFQT--STHIC 382 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--~~~~~ 382 (489)
+|+..+.||+|+||.||+|.+..++..||+|.+...... .......+.+|+.+++.++||||+++++++.. ...++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 689999999999999999999999999999998654321 23345678889999999999999999998875 36789
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC--
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC-- 460 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~-- 460 (489)
++|||+++++|.+++.... .+++.....++.|++.||.|||+++++|+||||+||+++.++.+||+|||++.....
T Consensus 83 l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 160 (266)
T ss_pred EEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccc
Confidence 9999999999999997653 488999999999999999999999999999999999999999999999999853211
Q ss_pred ----------------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ----------------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ----------------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~ 210 (266)
T cd06651 161 MSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWA 210 (266)
T ss_pred ccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcc
Confidence 1111 124589999999999999999985
No 206
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.94 E-value=6.5e-26 Score=236.98 Aligned_cols=173 Identities=21% Similarity=0.346 Sum_probs=147.6
Q ss_pred ccCcccccccCCCCceEEEEEEEcC--CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQG--AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~--tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 382 (489)
..+|.+++.||.|+||.||+|...+ +++.||+|.+... ....+|+.+++.++||||+++++++.....+|
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~ 162 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTVC 162 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence 3579999999999999999998653 5678999988543 12356999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC--
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC-- 460 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~-- 460 (489)
++||++ +++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 163 lv~e~~-~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 163 MVMPKY-KCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred EEehhc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 999999 47999999554 4589999999999999999999999999999999999999999999999999854321
Q ss_pred ---------------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ---------------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---------------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 240 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~ 288 (392)
T PHA03207 240 DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLF 288 (392)
T ss_pred ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 1221 234699999999999999999983
No 207
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.94 E-value=1.5e-25 Score=218.81 Aligned_cols=179 Identities=22% Similarity=0.398 Sum_probs=151.3
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEE-eCCeE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQ-TSTHI 381 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-~~~~~ 381 (489)
+...+|++.+.||+|+||.||++... |..+|+|.+... ...+.+.+|+.+++.++|||++++++++. .....
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (256)
T cd05082 3 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 75 (256)
T ss_pred ccHHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCce
Confidence 34568999999999999999999765 778999988543 22456788999999999999999999764 45679
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC- 460 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~- 460 (489)
+++|||+++++|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.....
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 76 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred EEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 9999999999999999876555688999999999999999999999999999999999999999999999999864321
Q ss_pred -----------CCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 461 -----------KPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 -----------~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+ ....+|+|++|++++++++ |..||.
T Consensus 156 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~ 201 (256)
T cd05082 156 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 201 (256)
T ss_pred CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 121 1224699999999999996 999884
No 208
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.94 E-value=1.4e-25 Score=222.02 Aligned_cols=182 Identities=22% Similarity=0.303 Sum_probs=153.0
Q ss_pred ccCcccccccCCCCceEEEEEEEcC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQG-----AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST 379 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~-----tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 379 (489)
.++|.+.+.||+|+||.||+|.+.. ++..||+|.+... ........+..|+.+++.++||||+++++++....
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES--CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 3579999999999999999999987 7789999988643 22334456888999999999999999999999888
Q ss_pred eEEEEEecCCCCCHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---cEEEEe
Q 042772 380 HICLITDFCPGGELFALLDKQPM-----KIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG---HVVLTD 451 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~-----~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g---~vKL~D 451 (489)
..+++|||+++++|.+++..... ..+++..+..++.||+.||.|||+++++|+||||+||+++.++ .+||+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 99999999999999999976521 2488999999999999999999999999999999999998765 599999
Q ss_pred cCCccccCC-----------------CCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 452 FDLSFMTSC-----------------KPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 452 FGlS~~~~~-----------------~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
||+++.... +|+ ....+|+|++|++++++++ |..||.
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~ 223 (277)
T cd05036 163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYP 223 (277)
T ss_pred CccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 999864321 111 1234689999999999985 999985
No 209
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.94 E-value=1.2e-25 Score=220.18 Aligned_cols=179 Identities=21% Similarity=0.323 Sum_probs=153.0
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccc---cchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVM---LNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 383 (489)
+|+..+.||.|+||.||+|.. .+++.+|+|.+..... ........+.+|+++++.++|+||+++++++......++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 478899999999999999986 4688999998864321 123345678889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC----
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS---- 459 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~---- 459 (489)
+|||+++++|.+++.+. ..+++..+..++.|++.||.|||+.+++|+||+|+||++++++.++|+|||++....
T Consensus 80 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 80 FMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 99999999999999775 347899999999999999999999999999999999999999999999999875321
Q ss_pred -----------------CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 -----------------CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 -----------------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~ 209 (265)
T cd06631 158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLA 209 (265)
T ss_pred cccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccc
Confidence 11222 134689999999999999999985
No 210
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.94 E-value=9.3e-26 Score=223.47 Aligned_cols=183 Identities=17% Similarity=0.293 Sum_probs=151.8
Q ss_pred cccCcccccccCCCCceEEEEEEEcCC-----CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGA-----GELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS 378 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~t-----g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 378 (489)
...+|++.+.||.|+||.||+|.+..+ ++.||+|.++... .......+..|..+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~ 80 (283)
T cd05091 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE 80 (283)
T ss_pred CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC
Confidence 456799999999999999999987643 5789999987442 233456688899999999999999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC
Q 042772 379 THICLITDFCPGGELFALLDKQP--------------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD 444 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~~--------------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~ 444 (489)
...++++||+++++|.+++.... ...+++..+..++.|++.||.|||++||+||||||+||+++++
T Consensus 81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK 160 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC
Confidence 99999999999999999986321 2347888899999999999999999999999999999999999
Q ss_pred CcEEEEecCCccccCC-----------------CCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 445 GHVVLTDFDLSFMTSC-----------------KPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 445 g~vKL~DFGlS~~~~~-----------------~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+.+||+|||+++.... +|+ ....+|+|++|++++|+++ |..||.
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~ 228 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 228 (283)
T ss_pred CceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCC
Confidence 9999999998763210 111 1224599999999999986 887874
No 211
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=1.2e-25 Score=223.16 Aligned_cols=181 Identities=26% Similarity=0.379 Sum_probs=157.1
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEE
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 383 (489)
..++|++++.||+|+||+||++.+..+++.||+|.+.... .......+.+|+++++.++||||+++++++.....+++
T Consensus 3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 80 (284)
T cd06620 3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICM 80 (284)
T ss_pred cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEE
Confidence 3467999999999999999999999999999999886532 23345678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecCCccccC---
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS--- 459 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~-~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~--- 459 (489)
||||+++++|.+++... +.+++..+..++.|++.||.|||+ .+++|+||||+||++++++.++|+|||++....
T Consensus 81 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~ 158 (284)
T cd06620 81 CMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI 158 (284)
T ss_pred EEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc
Confidence 99999999999998764 348999999999999999999997 699999999999999999999999999875321
Q ss_pred ----------CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----------CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~ 203 (284)
T cd06620 159 ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFA 203 (284)
T ss_pred cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCc
Confidence 11221 235689999999999999999985
No 212
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.94 E-value=1.9e-25 Score=222.49 Aligned_cols=181 Identities=20% Similarity=0.296 Sum_probs=152.6
Q ss_pred ccCcccccccCCCCceEEEEEEEc-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQ-----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST 379 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 379 (489)
.++|.+.+.||+|+||.||++... .++..+|+|.+... .....+.+..|+++++.++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 80 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 357999999999999999999863 34567999988643 2345667889999999999999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEE
Q 042772 380 HICLITDFCPGGELFALLDKQP-----------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV 448 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~-----------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vK 448 (489)
.++++|||+++++|.+++.... ...+++..+..++.|++.||+|||++|++||||||+||++++++.+|
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEE
Confidence 9999999999999999997542 12489999999999999999999999999999999999999999999
Q ss_pred EEecCCccccC-----------------CCCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 449 LTDFDLSFMTS-----------------CKPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 449 L~DFGlS~~~~-----------------~~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
|+|||++.... .+|+. ...+|+|++|+++++|++ |..||.
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~ 224 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY 224 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999986321 11221 124689999999999998 888873
No 213
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.94 E-value=4.1e-26 Score=225.84 Aligned_cols=178 Identities=20% Similarity=0.327 Sum_probs=151.6
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++.+.||+|+||.||+|.++.+|+.||+|.+..... .......+..|+.+++.++||||+++++++.+....++++|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 48889999999999999999999999999999875422 22233556779999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------- 459 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------- 459 (489)
|++ ++|.+++.... ..+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++....
T Consensus 80 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (284)
T cd07839 80 YCD-QDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYS 157 (284)
T ss_pred cCC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcC
Confidence 996 58988887543 348999999999999999999999999999999999999999999999999886432
Q ss_pred --------CCCce-------eecccccchHHHHHHHHhCCccc
Q 042772 460 --------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTY 487 (489)
Q Consensus 460 --------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY 487 (489)
.+|+. ...+|+|++|++++++++|..|+
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~ 200 (284)
T cd07839 158 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 200 (284)
T ss_pred CCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCC
Confidence 11222 22358999999999999998885
No 214
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.94 E-value=1.2e-25 Score=230.59 Aligned_cols=184 Identities=23% Similarity=0.335 Sum_probs=149.9
Q ss_pred ccccCcccccccCCCCceEEEEEEEc-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQ-----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQ 376 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~-----~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~ 376 (489)
+..++|++.+.||+|+||.||+|.+. .+++.||+|.++... .......+..|+.++..+ +||||+++++++.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 34568999999999999999999853 457899999996542 233456788899999999 6899999999876
Q ss_pred eC-CeEEEEEecCCCCCHHHHHhhCC------------------------------------------------------
Q 042772 377 TS-THICLITDFCPGGELFALLDKQP------------------------------------------------------ 401 (489)
Q Consensus 377 ~~-~~~~lVmEy~~ggsL~~~L~~~~------------------------------------------------------ 401 (489)
.. ..++++|||+++|+|.+++....
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 54 56899999999999999986531
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC----------
Q 042772 402 -----------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC---------- 460 (489)
Q Consensus 402 -----------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~---------- 460 (489)
...++...+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence 12367788889999999999999999999999999999999999999999999864211
Q ss_pred -------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 -------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 -------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++ |..||.
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 283 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 283 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 1211 123489999999999985 998884
No 215
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.94 E-value=1.6e-25 Score=220.69 Aligned_cols=178 Identities=27% Similarity=0.426 Sum_probs=156.4
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++.+.||.|+||.||+|.+..+++.||+|.+.... .......+..|+.+++.++||||+++++++.....+|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 36899999999999999999999999999999987542 2344566788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
||+++++|.+++... .+++..+..++.|++.||.|||+++++|+||+|+||++++++.++|+|||++.....
T Consensus 79 e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 155 (274)
T cd06609 79 EYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKR 155 (274)
T ss_pred EeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccccc
Confidence 999999999999864 589999999999999999999999999999999999999999999999998854321
Q ss_pred ----------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ----------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ----------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 156 ~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~ 199 (274)
T cd06609 156 NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLS 199 (274)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 1221 234699999999999999999984
No 216
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.94 E-value=1.7e-25 Score=219.88 Aligned_cols=180 Identities=25% Similarity=0.309 Sum_probs=146.8
Q ss_pred cccccccCCCCceEEEEEEEcCCCc--EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC------C
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGE--LYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------T 379 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~--~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~------~ 379 (489)
|.+.+.||+|+||.||+|.+..++. .+|+|.++... ........+..|..+++.++||||+++++.+... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 3567889999999999999887765 68999886543 2345567888899999999999999999976432 2
Q ss_pred eEEEEEecCCCCCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCc
Q 042772 380 HICLITDFCPGGELFALLDKQ----PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~----~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS 455 (489)
..+++|||+++|+|.+++... ....+++..+..++.|++.||.|||+++|+||||||+|||+++++.+||+|||++
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 578999999999999987432 2234789999999999999999999999999999999999999999999999998
Q ss_pred cccCCC-----------C-c-----------eeecccccchHHHHHHHHh-CCcccC
Q 042772 456 FMTSCK-----------P-Q-----------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 456 ~~~~~~-----------~-~-----------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
...... + . .....|+|++|++++++++ |..||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 216 (272)
T cd05075 160 KKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYP 216 (272)
T ss_pred cccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCC
Confidence 643210 0 0 1124589999999999998 788874
No 217
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.94 E-value=2.2e-25 Score=220.62 Aligned_cols=177 Identities=24% Similarity=0.362 Sum_probs=154.7
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
.|+.++.||.|+||.||+|.+..++..||+|.+.... .......+..|+.+++.+.||||+++++++.+....|+|||
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME 82 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence 5888999999999999999999999999999987542 23456788889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------ 460 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------ 460 (489)
|+++++|.+++... .+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 83 ~~~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06640 83 YLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred cCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccc
Confidence 99999999998753 478999999999999999999999999999999999999999999999999853321
Q ss_pred ---------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ---------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~ 202 (277)
T cd06640 160 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNS 202 (277)
T ss_pred cccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCC
Confidence 1211 124589999999999999999984
No 218
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.94 E-value=1.3e-25 Score=253.50 Aligned_cols=186 Identities=24% Similarity=0.394 Sum_probs=155.4
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC--C
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS--T 379 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~ 379 (489)
...+.+|++++.||.|+||.||+|.+..+++.+|+|.+..... .......+..|+.+++.++||||++++++|... .
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence 3456789999999999999999999999999999999976533 334557788899999999999999999988653 5
Q ss_pred eEEEEEecCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC-------CCeecCCCCCCEEEec-------
Q 042772 380 HICLITDFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIGLEYLHCL-------GIIYRDLKPENILLQK------- 443 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH~~-------gIvHrDLKP~NILld~------- 443 (489)
.+||||||+++|+|.++|... ....+++..++.|+.||+.||.|||+. +|+||||||+||||+.
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 799999999999999999753 224589999999999999999999984 4999999999999964
Q ss_pred ----------CCcEEEEecCCccccC--------------CCCcee--------ecccccchHHHHHHHHhCCcccC
Q 042772 444 ----------DGHVVLTDFDLSFMTS--------------CKPQVF--------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 444 ----------~g~vKL~DFGlS~~~~--------------~~~~~~--------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+.+||+|||++.... .+|+.+ ..+|+|++|++++++++|..||.
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~ 244 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH 244 (1021)
T ss_pred ccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 2358999999986432 122222 24599999999999999999985
No 219
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.93 E-value=1.8e-25 Score=219.95 Aligned_cols=175 Identities=24% Similarity=0.272 Sum_probs=144.4
Q ss_pred cccCCCCceEEEEEEEc--CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCC
Q 042772 312 KPLGCGDTGSVHLVELQ--GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCP 389 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~--~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ 389 (489)
+.||+|+||.||+|... .++..+|+|.+.... .......+.+|+.+++.++||||+++++++.+....++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA--SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 36899999999999865 345789999886542 22334567889999999999999999999999889999999999
Q ss_pred CCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-------
Q 042772 390 GGELFALLDKQP---MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------- 459 (489)
Q Consensus 390 ggsL~~~L~~~~---~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------- 459 (489)
+|+|.+++.... ....++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||++....
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence 999999997532 1235677888899999999999999999999999999999999999999999885321
Q ss_pred ----------CCCce-------------eecccccchHHHHHHHHh-CCcccC
Q 042772 460 ----------CKPQV-------------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 460 ----------~~~~~-------------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++ |..||.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~ 211 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYR 211 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCC
Confidence 11222 235699999999999985 999985
No 220
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.93 E-value=1.8e-25 Score=220.81 Aligned_cols=180 Identities=27% Similarity=0.388 Sum_probs=149.4
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHH-HHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI-MSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~i-l~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
++|++.+.||+|+||.||+|.++.+|+.||+|.++..... .....+..|..+ ++.++||||+++++++.....+|++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS--QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc--HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 3689999999999999999999999999999998765321 223344556554 6667899999999999999999999
Q ss_pred EecCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEecCCccccC--
Q 042772 385 TDFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIGLEYLHCL-GIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-- 459 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH~~-gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-- 459 (489)
|||++ |+|.+++... ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++....
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 99995 6888887652 234589999999999999999999997 99999999999999999999999999986321
Q ss_pred ------------CCCce----------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ------------CKPQV----------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ------------~~~~~----------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 208 (283)
T cd06617 158 VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYD 208 (283)
T ss_pred cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCC
Confidence 11222 134699999999999999999984
No 221
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.93 E-value=1.1e-25 Score=218.85 Aligned_cols=173 Identities=38% Similarity=0.674 Sum_probs=152.3
Q ss_pred cCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCCCH
Q 042772 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGEL 393 (489)
Q Consensus 314 LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ggsL 393 (489)
||.|+||.||+|.+..+|+.+++|.+.............+..|+.+++.++||||+++++.+......|++|||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999999999999999766544456677888999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC------------
Q 042772 394 FALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK------------ 461 (489)
Q Consensus 394 ~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~------------ 461 (489)
.+++.... .+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 158 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKED 158 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccc
Confidence 99998753 5899999999999999999999999999999999999999999999999987643221
Q ss_pred -----------Cc------eeecccccchHHHHHHHHhCCcccC
Q 042772 462 -----------PQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 -----------~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+ .....|+|++|.+++++++|..||.
T Consensus 159 ~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~ 202 (265)
T cd05579 159 KRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFH 202 (265)
T ss_pred cCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 11 1124689999999999999999985
No 222
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.93 E-value=1.6e-26 Score=226.33 Aligned_cols=172 Identities=30% Similarity=0.399 Sum_probs=149.4
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
+.||+|+|+.|--|....+|..||+|++.+. ......++.+|++++.+++ |+||+.++++|+++...|||||-+.|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~G 160 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRG 160 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccC
Confidence 6799999999999999999999999999886 3455678899999999885 99999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---cEEEEecCCccccC--------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG---HVVLTDFDLSFMTS-------- 459 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g---~vKL~DFGlS~~~~-------- 459 (489)
|+|.+++.++ +.|++.++..++.+|+.||.|||.+||.||||||+|||..+.. -||||||.+..-..
T Consensus 161 GplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spa 238 (463)
T KOG0607|consen 161 GPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPA 238 (463)
T ss_pred chHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCC
Confidence 9999999886 4599999999999999999999999999999999999996554 48999999863111
Q ss_pred --------C-----------------CCceeecccccchHHHHHHHHhCCcccC
Q 042772 460 --------C-----------------KPQVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --------~-----------------~~~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+ ..-+-...|.|++|.++|+|+.|..||.
T Consensus 239 stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFv 292 (463)
T KOG0607|consen 239 STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFV 292 (463)
T ss_pred CCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCcc
Confidence 0 0111234478999999999999999985
No 223
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.93 E-value=1.5e-25 Score=223.95 Aligned_cols=182 Identities=24% Similarity=0.362 Sum_probs=150.4
Q ss_pred ccCcccccccCCCCceEEEEEEEcCC--------------CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcce
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGA--------------GELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPT 370 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~t--------------g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~ 370 (489)
..+|++.+.||+|+||.||+|.+..+ ...||+|.+.... .......+.+|+++++.++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcCe
Confidence 45799999999999999999987543 2358999986542 3445567889999999999999999
Q ss_pred eeEEEEeCCeEEEEEecCCCCCHHHHHhhCCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 042772 371 LYASFQTSTHICLITDFCPGGELFALLDKQPM----------KIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENIL 440 (489)
Q Consensus 371 l~~~~~~~~~~~lVmEy~~ggsL~~~L~~~~~----------~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NIL 440 (489)
+++++......++||||+++++|.+++..... ..+++..+..++.|++.||.|||++|++|+||||+||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 99999999999999999999999999865321 13678889999999999999999999999999999999
Q ss_pred EecCCcEEEEecCCccccCC-----------------CCc------eeecccccchHHHHHHHHh--CCcccC
Q 042772 441 LQKDGHVVLTDFDLSFMTSC-----------------KPQ------VFYHAHVNGFYFIMYKWLT--GYFTYV 488 (489)
Q Consensus 441 ld~~g~vKL~DFGlS~~~~~-----------------~~~------~~~~~~v~s~g~~a~e~~~--G~lpY~ 488 (489)
++.++.+||+|||++..... +|+ ....+|+|++|++++++++ |..||.
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~ 234 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYS 234 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCc
Confidence 99999999999999864210 111 1234688999999999987 666664
No 224
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.93 E-value=1.7e-25 Score=222.76 Aligned_cols=180 Identities=20% Similarity=0.303 Sum_probs=150.2
Q ss_pred CcccccccCCCCceEEEEEEEcC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQG-----AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~-----tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 381 (489)
+|++.+.||+|+||.||+|.... ....+++|.+.... .......+..|+.+++.+.||||+++++.+......
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 47889999999999999998753 23578888886442 234457788999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 042772 382 CLITDFCPGGELFALLDKQP----------------------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENI 439 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~----------------------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NI 439 (489)
+++|||+++++|.+++.... ...+++..+..++.|++.||.|||+++++||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 99999999999999986421 13478899999999999999999999999999999999
Q ss_pred EEecCCcEEEEecCCccccCC-----------------CCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 440 LLQKDGHVVLTDFDLSFMTSC-----------------KPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 440 Lld~~g~vKL~DFGlS~~~~~-----------------~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
|+++++.+||+|||+++.... +|+ ....+|+|++|++++++++ |..||.
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 231 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 231 (290)
T ss_pred EEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999864311 111 1223589999999999997 999885
No 225
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.93 E-value=2e-25 Score=221.64 Aligned_cols=174 Identities=34% Similarity=0.532 Sum_probs=143.8
Q ss_pred ccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHH---HHHhCCCCCcceeeEEEEeCCeEEEEEecCC
Q 042772 313 PLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIERE---IMSLLDHPFLPTLYASFQTSTHICLITDFCP 389 (489)
Q Consensus 313 ~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~---il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ 389 (489)
.||+|+||.||+|.+..+++.||+|.+.+...........+..|.. +++...||||+.+++++......++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999999999999999997654332222222333433 3445679999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC----------
Q 042772 390 GGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS---------- 459 (489)
Q Consensus 390 ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~---------- 459 (489)
|++|..++... ..+++..+..++.|++.||.|||+++++||||||+||++++++.+||+|||++....
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCC
Confidence 99999998764 458999999999999999999999999999999999999999999999999875321
Q ss_pred ---CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ---CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ....|+|++|++++++++|..||.
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~ 197 (278)
T cd05606 159 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 197 (278)
T ss_pred cCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCC
Confidence 11222 234599999999999999999985
No 226
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.93 E-value=2.5e-25 Score=215.62 Aligned_cols=175 Identities=25% Similarity=0.354 Sum_probs=150.8
Q ss_pred cccCCCCceEEEEEEEcCC---CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecC
Q 042772 312 KPLGCGDTGSVHLVELQGA---GELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFC 388 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~t---g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~ 388 (489)
+.||+|+||.||+|..... +..|++|.+...... .....+..|+.+++.++||||+++++++.....++++|||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE--EERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccch--hHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 4699999999999999866 889999999765332 24678889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC
Q 042772 389 PGGELFALLDKQP-------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK 461 (489)
Q Consensus 389 ~ggsL~~~L~~~~-------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~ 461 (489)
++++|.+++.... ...+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||.+......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 9999999998752 245899999999999999999999999999999999999999999999999998654321
Q ss_pred -----------------Cce------eecccccchHHHHHHHHh-CCcccC
Q 042772 462 -----------------PQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 462 -----------------~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
|+. ...+|+|++|++++++++ |..||.
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~ 209 (262)
T cd00192 159 DYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYP 209 (262)
T ss_pred cccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCC
Confidence 111 123599999999999988 688885
No 227
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.93 E-value=2.1e-25 Score=220.78 Aligned_cols=180 Identities=24% Similarity=0.396 Sum_probs=153.4
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEe------
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQT------ 377 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~------ 377 (489)
.+.|++.+.||.|+||.||+|.+..+++.+|+|.+... ......+..|+.+++.+ +||||+++++++..
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 90 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH 90 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence 35799999999999999999999999999999998653 22345677888999888 79999999998853
Q ss_pred CCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccc
Q 042772 378 STHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFM 457 (489)
Q Consensus 378 ~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~ 457 (489)
....|++|||+++|+|.+++.......+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++..
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 45789999999999999999876555688999999999999999999999999999999999999999999999999753
Q ss_pred cC---------------CCCce-----------eecccccchHHHHHHHHhCCcccC
Q 042772 458 TS---------------CKPQV-----------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 458 ~~---------------~~~~~-----------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.. .+|+. ...+|+|++|++++++++|..||.
T Consensus 171 ~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~ 227 (282)
T cd06636 171 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLC 227 (282)
T ss_pred hhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCcc
Confidence 21 11222 124699999999999999999984
No 228
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=4.2e-27 Score=236.56 Aligned_cols=185 Identities=35% Similarity=0.631 Sum_probs=163.1
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCe
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTH 380 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~ 380 (489)
.+...+|..+.+||.|+||+|.+|+.+++.+.||||++++......+.++-...|..+|... +-|+++.++.+|++-+.
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR 424 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR 424 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence 45677899999999999999999999999999999999998887777888888899998877 47899999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccc---
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFM--- 457 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~--- 457 (489)
+|+||||+.||+|--.+.+- +.+.|..+.+++++|+.||-+||++||++||||.+||++|.+|+|||+|||++..
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred eeeEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccccc
Confidence 99999999999999888775 3489999999999999999999999999999999999999999999999999852
Q ss_pred ------cCC-CCceee-----------cccccchHHHHHHHHhCCcccC
Q 042772 458 ------TSC-KPQVFY-----------HAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 458 ------~~~-~~~~~~-----------~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+.| .|.++. ..+-|+||+.++||+.|..||+
T Consensus 503 ~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFd 551 (683)
T KOG0696|consen 503 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD 551 (683)
T ss_pred CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCC
Confidence 112 222222 2266889999999999999986
No 229
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.93 E-value=2.8e-25 Score=218.08 Aligned_cols=180 Identities=25% Similarity=0.340 Sum_probs=153.5
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeeccc--ccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC--CeEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV--MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS--THIC 382 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~~ 382 (489)
+|++.+.||+|+||.||+|.+..++..||+|.+.... .........+.+|+.++++++||||+++++++.+. ..++
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS 82 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence 6899999999999999999999999999999885422 12234567888999999999999999999988764 4689
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC---
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS--- 459 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~--- 459 (489)
++|||+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++....
T Consensus 83 ~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 160 (264)
T cd06653 83 IFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTIC 160 (264)
T ss_pred EEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccccc
Confidence 999999999999999765 347899999999999999999999999999999999999999999999999886321
Q ss_pred ---------------CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ---------------CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 210 (264)
T cd06653 161 MSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWA 210 (264)
T ss_pred ccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 11221 134599999999999999999984
No 230
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.93 E-value=2.6e-25 Score=217.36 Aligned_cols=175 Identities=36% Similarity=0.569 Sum_probs=147.4
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHH-hCCCCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS-LLDHPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~-~l~HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
+.||.|+||.||+|.+..+++.||+|.+.+...........+..|..++. ..+|||++++++++...+..|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 57999999999999999999999999997654333334444555655544 45899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC---------- 460 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~---------- 460 (489)
++|.+++... ..+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y 159 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDY 159 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCc
Confidence 9999999765 3489999999999999999999999999999999999999999999999998864321
Q ss_pred -CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 -KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.|+ ....+|+|++|.+++++++|..||.
T Consensus 160 ~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 194 (260)
T cd05611 160 LAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFH 194 (260)
T ss_pred cChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCC
Confidence 111 1234699999999999999999985
No 231
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.93 E-value=1.5e-25 Score=235.33 Aligned_cols=186 Identities=22% Similarity=0.297 Sum_probs=153.2
Q ss_pred ccccccCcccccccCCCCceEEEEEEEcC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEE
Q 042772 301 EKIGLHHFKPIKPLGCGDTGSVHLVELQG-----AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYAS 374 (489)
Q Consensus 301 ~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~-----tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~ 374 (489)
..+..++|.+.+.||+|+||.||+|.+.+ ++..||+|.++... .....+.+..|+.++..+. ||||++++++
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 34556679999999999999999999653 45689999997542 2334557888999999997 9999999999
Q ss_pred EEeCCeEEEEEecCCCCCHHHHHhhCCC----------------------------------------------------
Q 042772 375 FQTSTHICLITDFCPGGELFALLDKQPM---------------------------------------------------- 402 (489)
Q Consensus 375 ~~~~~~~~lVmEy~~ggsL~~~L~~~~~---------------------------------------------------- 402 (489)
+.....+++||||+++|+|.+++.+...
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 9999999999999999999999975321
Q ss_pred --------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 042772 403 --------------------------------------------KIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPEN 438 (489)
Q Consensus 403 --------------------------------------------~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~N 438 (489)
..+++..+..++.|++.||.|||+++++||||||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~N 269 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARN 269 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcce
Confidence 135677788899999999999999999999999999
Q ss_pred EEEecCCcEEEEecCCccccCC-----------------CCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 439 ILLQKDGHVVLTDFDLSFMTSC-----------------KPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 439 ILld~~g~vKL~DFGlS~~~~~-----------------~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
||+++++.+||+|||+++.... .|+ ....+|+|++|++++|+++ |..||.
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~ 343 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYP 343 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999999999864311 011 1123589999999999987 888884
No 232
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.93 E-value=2.5e-25 Score=217.79 Aligned_cols=180 Identities=27% Similarity=0.394 Sum_probs=153.8
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCC----
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTST---- 379 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~---- 379 (489)
.++|++.+.||+|+||.||+|.++.+++.+++|.+.... .....+..|+.+++++ .||||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 367999999999999999999999899999999987542 2345678899999998 7999999999997644
Q ss_pred --eEEEEEecCCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCc
Q 042772 380 --HICLITDFCPGGELFALLDKQP--MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455 (489)
Q Consensus 380 --~~~lVmEy~~ggsL~~~L~~~~--~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS 455 (489)
.+++||||+++++|.+++.... ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 4899999999999999987532 356899999999999999999999999999999999999999999999999987
Q ss_pred cccC---------------CCCce-----------eecccccchHHHHHHHHhCCcccC
Q 042772 456 FMTS---------------CKPQV-----------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 456 ~~~~---------------~~~~~-----------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.... .+|+. ...+|+|++|.+++++++|..||.
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 219 (275)
T cd06608 161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLC 219 (275)
T ss_pred eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCcc
Confidence 5321 11221 234699999999999999999985
No 233
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.93 E-value=2.3e-25 Score=217.02 Aligned_cols=174 Identities=29% Similarity=0.371 Sum_probs=148.4
Q ss_pred cccCCCCceEEEEEEEcC-CC--cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecC
Q 042772 312 KPLGCGDTGSVHLVELQG-AG--ELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFC 388 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~-tg--~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~ 388 (489)
+.||+|++|.||+|.+.. .+ ..||+|.+...... ...+.+..|+.++++++||||+++++.+.. ...+++|||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 468999999999999865 33 36999999765432 566788899999999999999999999888 8899999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC--------
Q 042772 389 PGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC-------- 460 (489)
Q Consensus 389 ~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~-------- 460 (489)
++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.....
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 157 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVME 157 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecc
Confidence 999999999876434589999999999999999999999999999999999999999999999998864321
Q ss_pred ----------CCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 461 ----------KPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 ----------~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+ ....+|+|++|++++++++ |..||.
T Consensus 158 ~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 202 (257)
T cd05040 158 EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWA 202 (257)
T ss_pred cCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 111 1123699999999999997 999983
No 234
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.93 E-value=3.5e-25 Score=222.75 Aligned_cols=181 Identities=24% Similarity=0.311 Sum_probs=156.3
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
..|+..+.||+|+||.||+|....+++.||+|.+...........+.+.+|+.+++.++||||+++++++......|+||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 46999999999999999999999999999999987554444555677889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
||++ |+|.+++.... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++....
T Consensus 95 e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~ 172 (307)
T cd06607 95 EYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFV 172 (307)
T ss_pred HhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCCcc
Confidence 9996 68888776543 348999999999999999999999999999999999999999999999999886432
Q ss_pred -----CCCcee---------ecccccchHHHHHHHHhCCcccC
Q 042772 460 -----CKPQVF---------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 -----~~~~~~---------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+.. ..+|+|++|.+++++++|..||.
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~ 215 (307)
T cd06607 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215 (307)
T ss_pred CCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCC
Confidence 123322 24699999999999999999874
No 235
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.93 E-value=8.6e-26 Score=223.54 Aligned_cols=179 Identities=25% Similarity=0.324 Sum_probs=153.4
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++.+.||+|+||.||+|.++.+++.||+|.+.+.... ....+.+.+|+++++.++||||+++++++......|+|||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD-KMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc-chhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 688999999999999999999999999999998654332 2334567789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------- 459 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------- 459 (489)
|+++++|..+.... ..+++..+..++.|++.||.|||+.|++|+||+|+||++++++.++|+|||++....
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07846 81 FVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYT 158 (286)
T ss_pred cCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccC
Confidence 99998888776553 338999999999999999999999999999999999999999999999999875421
Q ss_pred --------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 460 --------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~ 202 (286)
T cd07846 159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFP 202 (286)
T ss_pred cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCC
Confidence 12222 134689999999999999998874
No 236
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.93 E-value=2.3e-25 Score=222.70 Aligned_cols=181 Identities=28% Similarity=0.388 Sum_probs=150.3
Q ss_pred cCcccccccCCCCceEEEEEEEcC----------------CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcc
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQG----------------AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLP 369 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~----------------tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv 369 (489)
++|++.+.||+|+||.||++.+.. ++..+|+|.+.... .......+..|+.+++.++||||+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcc
Confidence 579999999999999999986542 34578999886542 334456788999999999999999
Q ss_pred eeeEEEEeCCeEEEEEecCCCCCHHHHHhhCCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 042772 370 TLYASFQTSTHICLITDFCPGGELFALLDKQPM---------KIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENIL 440 (489)
Q Consensus 370 ~l~~~~~~~~~~~lVmEy~~ggsL~~~L~~~~~---------~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NIL 440 (489)
++++++......+++|||+++++|.+++..... ..+++..+..++.|++.||.|||++|++|+||||+|||
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil 162 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL 162 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence 999999999999999999999999999976421 23677889999999999999999999999999999999
Q ss_pred EecCCcEEEEecCCccccCC-----------------CC------ceeecccccchHHHHHHHHh--CCcccC
Q 042772 441 LQKDGHVVLTDFDLSFMTSC-----------------KP------QVFYHAHVNGFYFIMYKWLT--GYFTYV 488 (489)
Q Consensus 441 ld~~g~vKL~DFGlS~~~~~-----------------~~------~~~~~~~v~s~g~~a~e~~~--G~lpY~ 488 (489)
++.++.++|+|||++..... .| .....+|+|++|++++|+++ |..||.
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~ 235 (296)
T cd05095 163 VGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYS 235 (296)
T ss_pred EcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence 99999999999999864311 01 11224699999999999987 667774
No 237
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.93 E-value=1.9e-25 Score=218.79 Aligned_cols=178 Identities=25% Similarity=0.346 Sum_probs=148.9
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
.++|++.+.||+|+||.||+|.+..++ .+|+|.+..... ..+.+.+|+.+++.++|||++++++++. ....+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 78 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIV 78 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEE
Confidence 356999999999999999999987654 589998764321 2356778999999999999999998875 4568999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC---- 460 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~---- 460 (489)
|||+++++|.+++.......+++..+..++.|++.||.|||+.|++|+||||+||++++++.++|+|||++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05069 79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc
Confidence 9999999999999876555578999999999999999999999999999999999999999999999999864321
Q ss_pred ------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 ------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 ------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++ |..||.
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 205 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYP 205 (260)
T ss_pred ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 1111 123589999999999998 898884
No 238
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1e-26 Score=228.73 Aligned_cols=187 Identities=30% Similarity=0.596 Sum_probs=164.1
Q ss_pred CccccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeC
Q 042772 300 GEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTS 378 (489)
Q Consensus 300 ~~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~ 378 (489)
...+++++|.++++||+|+|.+|.+++++.|.+.||+|++++...++....+....|..+..+. +||++|.++.+|+++
T Consensus 244 ~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqte 323 (593)
T KOG0695|consen 244 SQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE 323 (593)
T ss_pred ccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhccc
Confidence 3456789999999999999999999999999999999999998888888889999999998876 799999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcccc
Q 042772 379 THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~ 458 (489)
..+++|.||++||+|.-++.++. .++++.++++..+|+.||.|||++||++||||..|||+|..|++||+|+|++..-
T Consensus 324 srlffvieyv~ggdlmfhmqrqr--klpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred ceEEEEEEEecCcceeeehhhhh--cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcC
Confidence 99999999999999988887763 4999999999999999999999999999999999999999999999999998521
Q ss_pred ---------CC-CCceeecc-----------cccchHHHHHHHHhCCcccC
Q 042772 459 ---------SC-KPQVFYHA-----------HVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 ---------~~-~~~~~~~~-----------~v~s~g~~a~e~~~G~lpY~ 488 (489)
.| .|.++.++ +-|.+|+.+.||+.|..||+
T Consensus 402 l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd 452 (593)
T KOG0695|consen 402 LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD 452 (593)
T ss_pred CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence 12 23333222 44677888888888888886
No 239
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.93 E-value=1.2e-25 Score=222.24 Aligned_cols=177 Identities=24% Similarity=0.372 Sum_probs=153.9
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
.|+..+.||+|+||.||+|.+..+++.||+|.+.... .....+.+..|+.+++.++||||+++++++......|+|||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence 4888899999999999999999999999999986542 23345678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------ 460 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------ 460 (489)
|+++++|.+++.. ..+++..+..++.|++.||.|||++|++|+||+|+||++++++.++|+|||++.....
T Consensus 83 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06642 83 YLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred ccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhh
Confidence 9999999999865 3478999999999999999999999999999999999999999999999999854321
Q ss_pred ---------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ---------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~ 202 (277)
T cd06642 160 TFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNS 202 (277)
T ss_pred cccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCc
Confidence 1111 124589999999999999999974
No 240
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=1.8e-25 Score=224.85 Aligned_cols=184 Identities=23% Similarity=0.318 Sum_probs=152.1
Q ss_pred ccccCcccccccCCCCceEEEEEEEcC-------CCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQG-------AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYAS 374 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~-------tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~ 374 (489)
+..++|.+.+.||+|+||.||+|.+.. ++..+|+|.+.... .......+..|+.+++.+ +||||++++++
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGA 92 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence 334679999999999999999998753 23579999987542 233456788899999999 79999999999
Q ss_pred EEeCCeEEEEEecCCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 042772 375 FQTSTHICLITDFCPGGELFALLDKQP--------------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENIL 440 (489)
Q Consensus 375 ~~~~~~~~lVmEy~~ggsL~~~L~~~~--------------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NIL 440 (489)
+......|+||||+++|+|.+++.... ...++...+..++.|++.||.|||++|++||||||+||+
T Consensus 93 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 172 (307)
T cd05098 93 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 172 (307)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheE
Confidence 999999999999999999999997642 124788999999999999999999999999999999999
Q ss_pred EecCCcEEEEecCCccccCC-----------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 441 LQKDGHVVLTDFDLSFMTSC-----------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 441 ld~~g~vKL~DFGlS~~~~~-----------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
++.++.+||+|||++..... +|+. ...+|+|++|+++++|++ |..||.
T Consensus 173 l~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~ 244 (307)
T cd05098 173 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 244 (307)
T ss_pred EcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999853210 1111 123588999999999987 888874
No 241
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.93 E-value=2.5e-25 Score=219.99 Aligned_cols=179 Identities=23% Similarity=0.389 Sum_probs=154.9
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++.+.||+|+||.||+|.+..+|..||+|.+..... .......+..|+.+++.++||||+++++++......++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL-EGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc-cchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 48899999999999999999999999999999876532 23345678889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------ 460 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------ 460 (489)
|+ +++|.+++.... ..+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.....
T Consensus 80 ~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (286)
T cd07832 80 YM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLY 157 (286)
T ss_pred cc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcc
Confidence 99 999999987654 4589999999999999999999999999999999999999999999999998864321
Q ss_pred ----------CCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ----------KPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ----------~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|.+++++++|..+|.
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~ 202 (286)
T cd07832 158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFP 202 (286)
T ss_pred ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcC
Confidence 1222 234689999999999999977763
No 242
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.93 E-value=1.8e-25 Score=225.44 Aligned_cols=172 Identities=22% Similarity=0.338 Sum_probs=140.1
Q ss_pred ccccCCCCceEEEEEEEc--CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe--CCeEEEEEe
Q 042772 311 IKPLGCGDTGSVHLVELQ--GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT--STHICLITD 386 (489)
Q Consensus 311 ~~~LG~G~fG~Vy~a~~~--~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--~~~~~lVmE 386 (489)
.+.||+|+||.||+|.++ .+++.||+|.+..... ...+.+|+.+++.++||||+++++++.. ...+|++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 468999999999999976 4678999999865421 2346679999999999999999998854 457899999
Q ss_pred cCCCCCHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE----ecCCcEEEEecCCc
Q 042772 387 FCPGGELFALLDKQ-------PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILL----QKDGHVVLTDFDLS 455 (489)
Q Consensus 387 y~~ggsL~~~L~~~-------~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILl----d~~g~vKL~DFGlS 455 (489)
|+ +++|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|
T Consensus 81 ~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 81 YA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred cc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 99 46998887642 12248999999999999999999999999999999999999 45678999999998
Q ss_pred cccC------------------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 456 FMTS------------------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 456 ~~~~------------------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+... .+|+. ....|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 217 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCcc
Confidence 6432 11222 123589999999999999999884
No 243
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=6.4e-27 Score=237.53 Aligned_cols=178 Identities=25% Similarity=0.387 Sum_probs=157.7
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
.|+..+.||+|+||.||+|.+..+++.||+|+++... .......+..|+.+|..++++||.++|++|.....++++||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 5888899999999999999999999999999998653 45567788889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------- 459 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------- 459 (489)
||.||++.++|+.. ..+.+..+..++.+++.|+.|||.++.+|||||+.|||+..+|.+||+|||.+....
T Consensus 92 y~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~ 169 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRK 169 (467)
T ss_pred HhcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhccc
Confidence 99999999999875 346899999999999999999999999999999999999999999999999985322
Q ss_pred --------CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 --------CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|++ -..+|+|++|.+++|++.|..||.
T Consensus 170 tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s 212 (467)
T KOG0201|consen 170 TFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHS 212 (467)
T ss_pred cccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCc
Confidence 12222 234588999999999999999984
No 244
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.93 E-value=7.4e-27 Score=249.65 Aligned_cols=184 Identities=23% Similarity=0.318 Sum_probs=162.3
Q ss_pred ccccccCcccccccCCCCceEEEEEEEcCCC---cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe
Q 042772 301 EKIGLHHFKPIKPLGCGDTGSVHLVELQGAG---ELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT 377 (489)
Q Consensus 301 ~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg---~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 377 (489)
.+++.....+.++||.|.||.|++|.++..| ..||||.++... .......|+.|..||.+++||||++|.|+...
T Consensus 624 kEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTk 701 (996)
T KOG0196|consen 624 KEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTK 701 (996)
T ss_pred hhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCCCCcEEEEEEEEec
Confidence 3677778899999999999999999998766 489999997653 45566789999999999999999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccc
Q 042772 378 STHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFM 457 (489)
Q Consensus 378 ~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~ 457 (489)
...++||+|||++|+|.++|..+.++ |+.-+...++..|+.||.||-++++|||||..+|||++.+..+|++|||+|+.
T Consensus 702 s~PvMIiTEyMENGsLDsFLR~~DGq-ftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRv 780 (996)
T KOG0196|consen 702 SKPVMIITEYMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 780 (996)
T ss_pred CceeEEEhhhhhCCcHHHHHhhcCCc-eEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceee
Confidence 99999999999999999999998755 88999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCce------------e------------ecccccchHHHHHHH-HhCCccc
Q 042772 458 TSCKPQV------------F------------YHAHVNGFYFIMYKW-LTGYFTY 487 (489)
Q Consensus 458 ~~~~~~~------------~------------~~~~v~s~g~~a~e~-~~G~lpY 487 (489)
+...++. | ..+|||+||..++|. +.|.-||
T Consensus 781 ledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPY 835 (996)
T KOG0196|consen 781 LEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 835 (996)
T ss_pred cccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcc
Confidence 7654422 1 344888888888874 6888887
No 245
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.93 E-value=2.4e-25 Score=217.76 Aligned_cols=180 Identities=26% Similarity=0.380 Sum_probs=151.2
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 382 (489)
+..++|++.+.||+|+||.||+|.... +..+|+|.+..... ..+.+.+|+.++++++|||++++++++. ....+
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~ 76 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWNG-NTKVAVKTLKPGTM----SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIY 76 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEecC-CceeEEEEecCCCC----CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcE
Confidence 344679999999999999999998764 56799999875432 1346788999999999999999999875 45689
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC--
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC-- 460 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~-- 460 (489)
++|||+++++|.+++.......+++..+..++.|++.||.|||++|++||||||+||++++++.++|+|||++.....
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 999999999999999876555689999999999999999999999999999999999999999999999999864321
Q ss_pred --------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 --------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 --------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+. ...+|+|++|.+++++++ |..||.
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~ 205 (260)
T cd05070 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYP 205 (260)
T ss_pred cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCC
Confidence 1211 124689999999999998 888874
No 246
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.93 E-value=2.9e-25 Score=220.53 Aligned_cols=177 Identities=26% Similarity=0.383 Sum_probs=148.6
Q ss_pred CcccccccCCCCceEEEEEEE----cCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC--Ce
Q 042772 307 HFKPIKPLGCGDTGSVHLVEL----QGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS--TH 380 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~----~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~ 380 (489)
.|++++.||+|+||.||+|.. ..++..||+|.++... .......+.+|+.+++.+.||||+++++++... ..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 478999999999999999985 4568899999986442 334456788999999999999999999988775 57
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC 460 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~ 460 (489)
.++||||++|++|.+++.+.. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++....
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 161 (284)
T ss_pred eEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCcccccccc
Confidence 899999999999999997653 3478999999999999999999999999999999999999999999999999864321
Q ss_pred ------------------CCc------eeecccccchHHHHHHHHhCCcc
Q 042772 461 ------------------KPQ------VFYHAHVNGFYFIMYKWLTGYFT 486 (489)
Q Consensus 461 ------------------~~~------~~~~~~v~s~g~~a~e~~~G~lp 486 (489)
+|+ ....+|+|++|++++++++|+.|
T Consensus 162 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~ 211 (284)
T cd05079 162 DKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDS 211 (284)
T ss_pred CccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCC
Confidence 111 11346899999999999987654
No 247
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=2.4e-25 Score=223.47 Aligned_cols=184 Identities=22% Similarity=0.309 Sum_probs=151.9
Q ss_pred ccccCcccccccCCCCceEEEEEEEc-------CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQ-------GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYAS 374 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~-------~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~ 374 (489)
+...+|++.+.||+|+||.||+|.+. ..+..||+|.+... ........+..|+.+++.+ +||||++++++
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 89 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGA 89 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc--cchHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence 44568999999999999999999753 23458999988643 2234457788999999999 89999999999
Q ss_pred EEeCCeEEEEEecCCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 042772 375 FQTSTHICLITDFCPGGELFALLDKQP--------------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENIL 440 (489)
Q Consensus 375 ~~~~~~~~lVmEy~~ggsL~~~L~~~~--------------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NIL 440 (489)
+......+++|||+++|+|.+++.... ...++...+..++.|++.||.|||++|++||||||+||+
T Consensus 90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nil 169 (304)
T cd05101 90 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVL 169 (304)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEE
Confidence 999999999999999999999997642 134678889999999999999999999999999999999
Q ss_pred EecCCcEEEEecCCccccCC-----------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 441 LQKDGHVVLTDFDLSFMTSC-----------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 441 ld~~g~vKL~DFGlS~~~~~-----------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
++.++.+||+|||+++.... +|+. ...+|+|++|++++++++ |..||.
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 241 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 241 (304)
T ss_pred EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcc
Confidence 99999999999999863320 1221 124688999999999987 777764
No 248
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.93 E-value=2.1e-25 Score=217.44 Aligned_cols=177 Identities=23% Similarity=0.357 Sum_probs=149.6
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEE
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 383 (489)
.+++|++.+.||+|+||.||++.. +++.||+|.+.... ....+.+|+.+++.++||||+++++++... ..++
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~ 75 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYI 75 (254)
T ss_pred cHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEE
Confidence 346799999999999999999874 57889999886431 235677899999999999999999988665 4799
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC---
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC--- 460 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~--- 460 (489)
+|||+++++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||++.....
T Consensus 76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~ 155 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD 155 (254)
T ss_pred EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCC
Confidence 99999999999999876555689999999999999999999999999999999999999999999999998864221
Q ss_pred ---------CCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 461 ---------KPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 ---------~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+ .....|+|++|++++++++ |..||.
T Consensus 156 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~ 199 (254)
T cd05083 156 NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYP 199 (254)
T ss_pred CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCc
Confidence 111 1124589999999999986 999885
No 249
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.93 E-value=4.1e-25 Score=214.55 Aligned_cols=180 Identities=26% Similarity=0.390 Sum_probs=155.2
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccc--cchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVM--LNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
+|+..+.||+|+||+||+|....++..|++|.+..... ........+..|+.+++.++||||+++++++......+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 47788999999999999999998899999999865432 1234567788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC---- 460 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~---- 460 (489)
|||+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~ 158 (258)
T cd06632 81 LELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFA 158 (258)
T ss_pred EEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccccc
Confidence 9999999999999775 3478999999999999999999999999999999999999999999999998753221
Q ss_pred ----------CCc-------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 ----------KPQ-------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ----------~~~-------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.|+ .....|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~ 203 (258)
T cd06632 159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWS 203 (258)
T ss_pred cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcc
Confidence 111 2234689999999999999999985
No 250
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=3.2e-25 Score=223.96 Aligned_cols=184 Identities=24% Similarity=0.310 Sum_probs=152.7
Q ss_pred ccccCcccccccCCCCceEEEEEEEcC-------CCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQG-------AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYAS 374 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~-------tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~ 374 (489)
+..++|.+.+.||+|+||.||+|.... ....+|+|.+.... .......+..|+.+++.+ +||||++++++
T Consensus 9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (314)
T cd05099 9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGV 86 (314)
T ss_pred ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence 344679999999999999999998642 34579999886532 234566788899999999 69999999999
Q ss_pred EEeCCeEEEEEecCCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 042772 375 FQTSTHICLITDFCPGGELFALLDKQP--------------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENIL 440 (489)
Q Consensus 375 ~~~~~~~~lVmEy~~ggsL~~~L~~~~--------------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NIL 440 (489)
+.....+|++|||+++|+|.+++.... ...+++..+..++.|++.||.|||++|++||||||+|||
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 166 (314)
T cd05099 87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL 166 (314)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEE
Confidence 999899999999999999999997632 234788899999999999999999999999999999999
Q ss_pred EecCCcEEEEecCCccccCC-----------------CCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 441 LQKDGHVVLTDFDLSFMTSC-----------------KPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 441 ld~~g~vKL~DFGlS~~~~~-----------------~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
++.++.+||+|||+++.... +|+ ....+|+|++|++++++++ |..||.
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~ 238 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYP 238 (314)
T ss_pred EcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCC
Confidence 99999999999999863321 111 1224589999999999988 888874
No 251
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.93 E-value=1.8e-25 Score=224.44 Aligned_cols=181 Identities=21% Similarity=0.301 Sum_probs=151.6
Q ss_pred CcccccccCCCCceEEEEEEEcC--CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC--CeEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQG--AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS--THIC 382 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~--tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~~ 382 (489)
+|++.+.||+|+||.||+|.+.. +++.||+|.+.............+..|+.+++.++||||+++++++... ..++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 48889999999999999999988 8999999999764322333445677899999999999999999999988 7899
Q ss_pred EEEecCCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec----CCcEEEEecCCc
Q 042772 383 LITDFCPGGELFALLDKQP---MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQK----DGHVVLTDFDLS 455 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~---~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~----~g~vKL~DFGlS 455 (489)
+||||++ ++|.+++.... ...+++..+..++.|++.||.|||+++|+||||||+||+++. ++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999996 57887775431 235899999999999999999999999999999999999999 999999999998
Q ss_pred cccCC------------------CCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 456 FMTSC------------------KPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 456 ~~~~~------------------~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
..... +|+. ...+|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~ 217 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFK 217 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCc
Confidence 64321 1221 234589999999999999999885
No 252
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.93 E-value=4.2e-25 Score=214.54 Aligned_cols=181 Identities=24% Similarity=0.429 Sum_probs=156.5
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|+..+.||+|+||.||+|....+++.+|+|.+..... .......+..|+.+++.++||||+++++.+......++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 48899999999999999999999999999999976543 23446778899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEEecCCccccCC-----
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD-GHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~-g~vKL~DFGlS~~~~~----- 460 (489)
|+++++|.+++.......+++..+..++.|++.+|.|||++|++|+||||+||+++.+ +.+||+|||++.....
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY 159 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence 9999999999987655568999999999999999999999999999999999999855 4689999999864321
Q ss_pred ---------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ---------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ....|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~ 202 (256)
T cd08220 160 TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFE 202 (256)
T ss_pred ccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcc
Confidence 1221 234689999999999999999885
No 253
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.93 E-value=3.8e-25 Score=216.88 Aligned_cols=172 Identities=22% Similarity=0.343 Sum_probs=143.5
Q ss_pred ccCCCCceEEEEEEEc--CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 313 PLGCGDTGSVHLVELQ--GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 313 ~LG~G~fG~Vy~a~~~--~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
.||+|+||.||+|.+. ..+..||+|.+... ......+.+.+|+.+++.++||||+++++++.. ...++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~--~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNE--NEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccc--cChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCC
Confidence 4899999999999875 44567999988654 234445678899999999999999999998764 578999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC---------- 460 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~---------- 460 (489)
++|.+++.... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.....
T Consensus 79 ~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 79 GPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 99999987543 3589999999999999999999999999999999999999999999999999863221
Q ss_pred --------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 --------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 --------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++ |..||.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 200 (257)
T cd05115 158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYK 200 (257)
T ss_pred CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcC
Confidence 1111 124599999999999885 999984
No 254
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.93 E-value=4.2e-25 Score=216.29 Aligned_cols=180 Identities=24% Similarity=0.323 Sum_probs=152.0
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 382 (489)
+..++|++.+.||+|+||.||++.+.. +..+|+|.+... ....+.+.+|+.+++.++|+||+++++++.. ...+
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~ 76 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIY 76 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEecC-CccEEEEecCCC----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeE
Confidence 345689999999999999999998664 556999988643 2234678889999999999999999998877 7789
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC--
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC-- 460 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~-- 460 (489)
++|||+++++|.+++.......++...+..++.|++.||.|||+.|++|+||||+||+++.++.+||+|||++.....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 156 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 156 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCC
Confidence 999999999999999876555578889999999999999999999999999999999999999999999998754321
Q ss_pred --------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 --------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 --------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++ |..||.
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~ 205 (260)
T cd05073 157 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYP 205 (260)
T ss_pred cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCC
Confidence 1111 124589999999999998 999984
No 255
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.93 E-value=3.4e-25 Score=218.51 Aligned_cols=177 Identities=25% Similarity=0.426 Sum_probs=153.9
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC---CCCcceeeEEEEeCCeEEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD---HPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~l~~~~~~~~~~~l 383 (489)
.|+..+.||+|+||.||+|.+..+++.||+|.+.... .......+.+|+.+++.+. |||++++++++......|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 4888999999999999999999999999999986542 3344567788999999886 9999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC---
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC--- 460 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~--- 460 (489)
+|||+++++|.+++... .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc
Confidence 99999999999998653 488999999999999999999999999999999999999999999999998854321
Q ss_pred ------------CCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ------------KPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ------------~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~ 203 (277)
T cd06917 157 KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYS 203 (277)
T ss_pred ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCC
Confidence 1221 234689999999999999999985
No 256
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.93 E-value=3.2e-25 Score=219.72 Aligned_cols=181 Identities=25% Similarity=0.342 Sum_probs=151.4
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEE-----e
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQ-----T 377 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~-----~ 377 (489)
..++|++.+.||+|+||.||+|.+..+++.+|+|.+.... .....+..|+.+++.+ +||||+++++++. .
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 91 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN 91 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC
Confidence 4468999999999999999999999999999999876432 1224567799999998 7999999999874 3
Q ss_pred CCeEEEEEecCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCc
Q 042772 378 STHICLITDFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455 (489)
Q Consensus 378 ~~~~~lVmEy~~ggsL~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS 455 (489)
....++||||+++++|.+++... ....+++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||++
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~ 171 (286)
T cd06638 92 GDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS 171 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCce
Confidence 45799999999999999987642 2345789999999999999999999999999999999999999999999999998
Q ss_pred cccCC---------------CCce-----------eecccccchHHHHHHHHhCCcccC
Q 042772 456 FMTSC---------------KPQV-----------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 456 ~~~~~---------------~~~~-----------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
..... +|+. ...+|+|++|++++++++|..||.
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~ 230 (286)
T cd06638 172 AQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLA 230 (286)
T ss_pred eecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCC
Confidence 53221 1221 234699999999999999999874
No 257
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.93 E-value=1.2e-25 Score=220.85 Aligned_cols=181 Identities=35% Similarity=0.575 Sum_probs=158.8
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCCeEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lV 384 (489)
++|.+.+.||+|+||.||+|....+++.||+|++.+...........+..|..+++++. ||||+++++++......+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36899999999999999999999999999999998755444555677888999999998 99999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCCC--
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKP-- 462 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~~-- 462 (489)
|||+++++|.+++.... .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 81 LEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 99999999999998763 58999999999999999999999999999999999999999999999999986433211
Q ss_pred ---------------------------------c------eeecccccchHHHHHHHHhCCcccC
Q 042772 463 ---------------------------------Q------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 463 ---------------------------------~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+ .....|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 223 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFR 223 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCC
Confidence 1 1123588999999999999999985
No 258
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.93 E-value=2.4e-25 Score=221.84 Aligned_cols=181 Identities=20% Similarity=0.274 Sum_probs=153.9
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC--CeEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS--THIC 382 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~~ 382 (489)
.++|++.+.||.|+||.||+|.++.+++.+|+|.++..... ......+.+|+.+++.++||||+++++++... ...|
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 35799999999999999999999999999999999755332 22334567899999999999999999998877 8999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC--
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC-- 460 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~-- 460 (489)
+||||++ ++|.+++.... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.....
T Consensus 83 lv~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 83 MVMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred EEehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 9999996 59999987653 3589999999999999999999999999999999999999999999999998864321
Q ss_pred -------------CCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 461 -------------KPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -------------~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~ 208 (293)
T cd07843 161 KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFP 208 (293)
T ss_pred cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCC
Confidence 1221 134589999999999999998874
No 259
>PTZ00284 protein kinase; Provisional
Probab=99.93 E-value=2.4e-25 Score=238.01 Aligned_cols=179 Identities=25% Similarity=0.346 Sum_probs=145.0
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC------CCCcceeeEEEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD------HPFLPTLYASFQ 376 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~------HpnIv~l~~~~~ 376 (489)
...++|++++.||+|+||+||+|.+..+++.||+|+++... ........|+.+++.+. |++++.++++|.
T Consensus 126 ~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 126 VSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred cCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 34578999999999999999999999999999999996431 22234455777776664 456889998887
Q ss_pred eC-CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCC---------
Q 042772 377 TS-THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDG--------- 445 (489)
Q Consensus 377 ~~-~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~-~gIvHrDLKP~NILld~~g--------- 445 (489)
.. .++|+|||++ +++|.+++.+. ..+++..+..++.||+.||.|||+ .||+||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~ 278 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNR 278 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccc
Confidence 65 5799999998 78999998765 348999999999999999999998 5999999999999998765
Q ss_pred -------cEEEEecCCccccC------------CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 446 -------HVVLTDFDLSFMTS------------CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 446 -------~vKL~DFGlS~~~~------------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+||+|||++.... .+|+. ....|+|++|++++|+++|..||.
T Consensus 279 ~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~ 346 (467)
T PTZ00284 279 ALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYD 346 (467)
T ss_pred ccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 49999999875321 12222 223499999999999999999995
No 260
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93 E-value=5e-25 Score=219.32 Aligned_cols=181 Identities=28% Similarity=0.419 Sum_probs=153.4
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC--CeEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS--THICL 383 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~~l 383 (489)
++|...+.||.|++|.||+|.+..+++.+|+|.+.... .......+.+|+++++.++||||++++++|... ..+|+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC--chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 36889999999999999999999999999999987542 234567788999999999999999999988653 47899
Q ss_pred EEecCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-
Q 042772 384 ITDFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC- 460 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~- 460 (489)
||||+++++|.+++... ....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 99999999999887642 234478999999999999999999999999999999999999999999999999753221
Q ss_pred ------------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ------------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ------------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ....|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 204 (287)
T cd06621 159 LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFP 204 (287)
T ss_pred ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 1211 124589999999999999999985
No 261
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.93 E-value=1.6e-25 Score=221.57 Aligned_cols=180 Identities=22% Similarity=0.372 Sum_probs=154.9
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|+.++.||.|++|.||+|.+..+++.||+|.+..... .......+..|++++++++||||+++++++......++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 48899999999999999999999999999998865432 22234567889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------- 459 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------- 459 (489)
|+. ++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++....
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 158 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccc
Confidence 995 689999887655668999999999999999999999999999999999999999999999999875321
Q ss_pred --------CCCcee-------ecccccchHHHHHHHHhCCcccC
Q 042772 460 --------CKPQVF-------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --------~~~~~~-------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+.. ..+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~ 202 (284)
T cd07860 159 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 202 (284)
T ss_pred cccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 123322 23589999999999999999884
No 262
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.93 E-value=3.4e-27 Score=229.37 Aligned_cols=176 Identities=24% Similarity=0.387 Sum_probs=156.9
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
-|.+++.||+|+||.||+|.++.+|+.+|||.+... ..++.+..|+.|+++++.|++|++|++|.....+|+|||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 488999999999999999999999999999988643 457889999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------- 459 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------- 459 (489)
||.-|+..+.+..+ ++++++.++..++...+.||+|||...-+|||||..|||++.+|+.||+|||.|-.+.
T Consensus 109 YCGAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRN 187 (502)
T KOG0574|consen 109 YCGAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRN 187 (502)
T ss_pred hcCCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhC
Confidence 99999999998765 4679999999999999999999999999999999999999999999999999985433
Q ss_pred --CCCceee------------cccccchHHHHHHHHhCCcccC
Q 042772 460 --CKPQVFY------------HAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --~~~~~~~------------~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.....|. .+++|++|.++.||+-|..||.
T Consensus 188 TVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYs 230 (502)
T KOG0574|consen 188 TVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYS 230 (502)
T ss_pred ccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcc
Confidence 1222332 3478899999999999999985
No 263
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.93 E-value=4.8e-26 Score=216.68 Aligned_cols=185 Identities=22% Similarity=0.284 Sum_probs=159.4
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC---
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS--- 378 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--- 378 (489)
-+...+|++.+.||+|+|+-||+++...+++.||+|.+... +........+|++..++++||||++++++...+
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~---~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH---SQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD 93 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeecc---chHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc
Confidence 45668999999999999999999999999999999999765 345677888999999999999999999876443
Q ss_pred --CeEEEEEecCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEecCCcEEEEec
Q 042772 379 --THICLITDFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIGLEYLHCLG--IIYRDLKPENILLQKDGHVVLTDF 452 (489)
Q Consensus 379 --~~~~lVmEy~~ggsL~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH~~g--IvHrDLKP~NILld~~g~vKL~DF 452 (489)
..+||+++|...|+|.+.+... .+..+++.+++.|+.+||+||++||... +.||||||.|||+.+.+.++|.||
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEec
Confidence 3599999999999999998764 3335899999999999999999999998 999999999999999999999999
Q ss_pred CCccccC------------------------CCCc---------eeecccccchHHHHHHHHhCCcccCC
Q 042772 453 DLSFMTS------------------------CKPQ---------VFYHAHVNGFYFIMYKWLTGYFTYVP 489 (489)
Q Consensus 453 GlS~~~~------------------------~~~~---------~~~~~~v~s~g~~a~e~~~G~lpY~~ 489 (489)
|.++... -+|+ .....|+|++|+++|.|+.|.-||++
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~ 243 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFER 243 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchH
Confidence 9985322 1122 22455999999999999999999973
No 264
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.93 E-value=2.6e-25 Score=219.34 Aligned_cols=180 Identities=26% Similarity=0.342 Sum_probs=152.5
Q ss_pred cCcccccccCCCCceEEEEEEEcC----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe--CC
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQG----AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT--ST 379 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~----tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--~~ 379 (489)
.+|++.+.||+|+||.||+|.+.. ++..+|+|.+...... .....+..|+.+++.+.||||+++++++.. ..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 468899999999999999999653 4789999999755322 356778899999999999999999998877 55
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
..+++|||+++++|.+++..... .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRD-QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCcc-ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 79999999999999999987643 48999999999999999999999999999999999999999999999999986543
Q ss_pred C------------------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 C------------------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ~------------------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
. .|+ ....+|+|++|++++++++|..|+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~ 213 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQ 213 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcc
Confidence 1 111 1124588999999999999988763
No 265
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.93 E-value=4.7e-25 Score=215.37 Aligned_cols=172 Identities=23% Similarity=0.338 Sum_probs=145.7
Q ss_pred cccCCCCceEEEEEEEcCCC---cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecC
Q 042772 312 KPLGCGDTGSVHLVELQGAG---ELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFC 388 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg---~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~ 388 (489)
+.||+|+||.||+|.+..++ ..+|+|.+...... .....+..|+.+++.++||||+++++++. ....+++|||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 46999999999999876554 78999998765432 34567888999999999999999999876 44689999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC--------
Q 042772 389 PGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC-------- 460 (489)
Q Consensus 389 ~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~-------- 460 (489)
++|+|.+++.... .+++..+..++.|++.||.|||.++++|+||||+|||++.++.+||+|||+++....
T Consensus 78 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~ 155 (257)
T cd05060 78 PLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT 155 (257)
T ss_pred CCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence 9999999998764 489999999999999999999999999999999999999999999999999863311
Q ss_pred ----------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 ----------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 ----------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++ |..||.
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~ 200 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYG 200 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcc
Confidence 1111 124699999999999996 999985
No 266
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.93 E-value=4.4e-25 Score=217.11 Aligned_cols=180 Identities=26% Similarity=0.399 Sum_probs=153.7
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeeccccc-------chHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVML-------NRNKVHRACIEREIMSLLDHPFLPTLYASFQTST 379 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~-------~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 379 (489)
+|...+.||.|+||.||+|....+++.+|+|.+...... .....+.+..|+.+++.++||||+++++++....
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 578889999999999999999989999999988642211 1123456778999999999999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
..++||||+++++|.+++... ..+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 999999999999999999876 458999999999999999999999999999999999999999999999999886321
Q ss_pred C-----------------CCc--------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 C-----------------KPQ--------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ~-----------------~~~--------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
. .|+ ....+|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~ 213 (272)
T cd06629 160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWS 213 (272)
T ss_pred ccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCc
Confidence 0 121 1233589999999999999999984
No 267
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.93 E-value=3.3e-26 Score=222.64 Aligned_cols=174 Identities=28% Similarity=0.470 Sum_probs=146.0
Q ss_pred cCcccc-cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHH-HHhCCCCCcceeeEEEEe----CC
Q 042772 306 HHFKPI-KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREI-MSLLDHPFLPTLYASFQT----ST 379 (489)
Q Consensus 306 ~~y~~~-~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~i-l~~l~HpnIv~l~~~~~~----~~ 379 (489)
++|.+. ++||-|-.|.|..|.++.||+.+|+|++..+ ...++|+++ +..-.|||||.++++|.. ..
T Consensus 61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred hhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 455554 6799999999999999999999999988533 345567776 334479999999998864 35
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---CCcEEEEecCCcc
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQK---DGHVVLTDFDLSF 456 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~---~g~vKL~DFGlS~ 456 (489)
.+.+|||.++||+|++.+..+....++|.++..|+.||+.|+.|||+.+|.||||||+|+|... |..+||+|||+|.
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK 212 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAK 212 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccccc
Confidence 6889999999999999999998888999999999999999999999999999999999999964 4579999999997
Q ss_pred ccC--------C------CCcee------ecccccchHHHHHHHHhCCccc
Q 042772 457 MTS--------C------KPQVF------YHAHVNGFYFIMYKWLTGYFTY 487 (489)
Q Consensus 457 ~~~--------~------~~~~~------~~~~v~s~g~~a~e~~~G~lpY 487 (489)
... | +|++. ...+.|++|+++|+++||..||
T Consensus 213 ~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPF 263 (400)
T KOG0604|consen 213 ETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263 (400)
T ss_pred ccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcc
Confidence 544 1 12221 2338899999999999999998
No 268
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.93 E-value=4.5e-25 Score=220.02 Aligned_cols=181 Identities=18% Similarity=0.267 Sum_probs=152.6
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++.+.||.|++|.||+|.++.+++.||+|.+..... .......+..|+.+++.++||||+++++++......|+||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 579999999999999999999999999999998865432 2233456778999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEEecCCccccC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQK-DGHVVLTDFDLSFMTS----- 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~-~g~vKL~DFGlS~~~~----- 459 (489)
||++ ++|.+++.......+++..+..++.||+.||.|||+++++|+||+|+||+++. ++.+||+|||++....
T Consensus 81 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~ 159 (294)
T PLN00009 81 EYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT 159 (294)
T ss_pred eccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence 9995 68998887665545688899999999999999999999999999999999985 5679999999885321
Q ss_pred ----------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ----------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~ 205 (294)
T PLN00009 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFP 205 (294)
T ss_pred cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 11221 124588999999999999999984
No 269
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.93 E-value=3.9e-25 Score=219.37 Aligned_cols=181 Identities=20% Similarity=0.292 Sum_probs=152.1
Q ss_pred ccCcccccccCCCCceEEEEEEEc-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQ-----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST 379 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 379 (489)
..+|...+.||+|+||.||++... .++..+|+|.+... .......+.+|+++++.++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQHQHIVRFYGVCTEGR 80 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC
Confidence 357888999999999999999753 34678999987643 3445567889999999999999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc
Q 042772 380 HICLITDFCPGGELFALLDKQPM-------------KIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGH 446 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~-------------~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~ 446 (489)
..+++|||+++++|.+++..... ..+++..+..++.|++.||.|||++|++||||||+|||+++++.
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCC
Confidence 99999999999999999976421 24789999999999999999999999999999999999999999
Q ss_pred EEEEecCCccccC-----------------CCCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 447 VVLTDFDLSFMTS-----------------CKPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 447 vKL~DFGlS~~~~-----------------~~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+||+|||++.... .+|+. ...+|+|++|+++++|++ |..||.
T Consensus 161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 226 (280)
T cd05092 161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWY 226 (280)
T ss_pred EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCc
Confidence 9999999985321 11211 123599999999999987 999884
No 270
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.93 E-value=3.5e-25 Score=220.37 Aligned_cols=180 Identities=41% Similarity=0.664 Sum_probs=152.8
Q ss_pred CcccccccCCCCceEEEEEEEc---CCCcEEEEEEeeccccc-chHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQ---GAGELYAMKAMEKSVML-NRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~---~tg~~vAiK~i~~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~ 381 (489)
+|++.+.||.|+||.||+|... .+|..||+|.+...... .......+..|+.+++.+ +||||+.+++++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4788999999999999999875 47899999998754322 223345677899999999 599999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC- 460 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~- 460 (489)
|+||||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||+|+|||++.++.+||+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 9999999999999999875 3488999999999999999999999999999999999999999999999998864321
Q ss_pred ---------------CCce--------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ---------------KPQV--------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---------------~~~~--------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.|+. ....|+|++|.+++++++|..||.
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~ 209 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFT 209 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCC
Confidence 1221 124699999999999999999984
No 271
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.93 E-value=5.3e-25 Score=213.82 Aligned_cols=177 Identities=25% Similarity=0.403 Sum_probs=155.5
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|++.+.||+|+||.||+|....+++.+++|.+.... ..+.+..|+++++.++||||+++++++......|+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 57999999999999999999999889999999986542 1577889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK---- 461 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~---- 461 (489)
||+++++|.+++.... ..+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++......
T Consensus 78 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~ 156 (256)
T cd06612 78 EYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKR 156 (256)
T ss_pred ecCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcccc
Confidence 9999999999997543 45899999999999999999999999999999999999999999999999998643311
Q ss_pred -----------Cce------eecccccchHHHHHHHHhCCcccC
Q 042772 462 -----------PQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 -----------~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+. ...+|+|++|.+++++++|..||.
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~ 200 (256)
T cd06612 157 NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYS 200 (256)
T ss_pred ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 111 124689999999999999999984
No 272
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.93 E-value=3e-25 Score=219.44 Aligned_cols=179 Identities=23% Similarity=0.347 Sum_probs=152.7
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++++.||.|++|.||+|.+..+|+.||+|.+..... ......+..|+.+++.++||||+++++++...+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 48899999999999999999999999999999875432 2234566789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 387 FCPGGELFALLDKQP-MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 387 y~~ggsL~~~L~~~~-~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
|++ ++|.+++.... ...+++..+..++.|++.||.|||++|++|+||||+||++++++.++|+|||++....
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (284)
T cd07836 79 YMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTF 157 (284)
T ss_pred cCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccc
Confidence 997 48998887643 2358999999999999999999999999999999999999999999999999885321
Q ss_pred ---------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ---------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
..|+. ...+|+|++|++++++++|..||.
T Consensus 158 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~ 202 (284)
T cd07836 158 SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFP 202 (284)
T ss_pred ccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 11221 224588999999999999999885
No 273
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.93 E-value=5e-25 Score=214.71 Aligned_cols=178 Identities=26% Similarity=0.470 Sum_probs=156.9
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++.+.||.|++|.||+|.+..+++.|++|.+..... ......+..|+.++..++||||+++++++......+++||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 68899999999999999999999999999999876532 2456778899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecCCccccCCC----
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK---- 461 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~-~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~---- 461 (489)
|+++++|.+++... ..+++..+..++.|++.||.|||+ +|++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~ 157 (264)
T cd06623 80 YMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC 157 (264)
T ss_pred ecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcc
Confidence 99999999999875 458999999999999999999999 99999999999999999999999999988643211
Q ss_pred -----------Cce------eecccccchHHHHHHHHhCCcccC
Q 042772 462 -----------PQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 -----------~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+. ....|+|++|.+++++++|..||.
T Consensus 158 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~ 201 (264)
T cd06623 158 NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFL 201 (264)
T ss_pred cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 111 124599999999999999999985
No 274
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=3.8e-25 Score=225.50 Aligned_cols=185 Identities=22% Similarity=0.322 Sum_probs=152.5
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCC-------CcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeE
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGA-------GELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYA 373 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~t-------g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~ 373 (489)
++...+|++.+.||+|+||.||+|.+... +..||+|.+... ......+.+..|+.+++++ +||||+++++
T Consensus 8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (334)
T cd05100 8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIINLLG 85 (334)
T ss_pred ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence 44556799999999999999999986432 247899988643 2334567788999999999 7999999999
Q ss_pred EEEeCCeEEEEEecCCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 042772 374 SFQTSTHICLITDFCPGGELFALLDKQP--------------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENI 439 (489)
Q Consensus 374 ~~~~~~~~~lVmEy~~ggsL~~~L~~~~--------------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NI 439 (489)
++.....++++|||+++|+|.+++.... ...++...+..++.|++.||.|||++|++||||||+||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 165 (334)
T cd05100 86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNV 165 (334)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceE
Confidence 9999999999999999999999997632 23467888899999999999999999999999999999
Q ss_pred EEecCCcEEEEecCCccccCC-----------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 440 LLQKDGHVVLTDFDLSFMTSC-----------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 440 Lld~~g~vKL~DFGlS~~~~~-----------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
|++.++.+||+|||+++.... +|+. ...+|+|++|++++++++ |..||.
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 238 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 238 (334)
T ss_pred EEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999863221 1111 124589999999999987 888874
No 275
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.93 E-value=2.1e-25 Score=220.66 Aligned_cols=179 Identities=24% Similarity=0.331 Sum_probs=152.5
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++.+.||+|+||.||+|.++.+++.||+|.++.... .......+..|+++++.++||||+++++++...+..+++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 68999999999999999999999999999998865432 23345678889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC-----
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK----- 461 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~----- 461 (489)
|++++.+..+.... ..+++..+..++.|++.||.|||+++++|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (288)
T cd07833 81 YVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL 158 (288)
T ss_pred cCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence 99876666555443 34899999999999999999999999999999999999999999999999987643211
Q ss_pred -----------C-------ceeecccccchHHHHHHHHhCCcccC
Q 042772 462 -----------P-------QVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 -----------~-------~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
| .....+|+|++|.+++++++|..||.
T Consensus 159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~ 203 (288)
T cd07833 159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFP 203 (288)
T ss_pred cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 1 11234589999999999999998874
No 276
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.93 E-value=5.6e-25 Score=215.04 Aligned_cols=172 Identities=23% Similarity=0.341 Sum_probs=144.7
Q ss_pred ccCCCCceEEEEEEE--cCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 313 PLGCGDTGSVHLVEL--QGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 313 ~LG~G~fG~Vy~a~~--~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
.||+|+||.||+|.+ ..++..+|+|+++... .+....+.+..|+.+++.++||||+++++++.. ...++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCC
Confidence 689999999999975 4567899999886442 234456778899999999999999999998754 467999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC---------- 460 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~---------- 460 (489)
|+|.+++... ..+++..+..++.|++.||.|||++|++||||||.||+++.++.+||+|||++.....
T Consensus 80 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 80 GPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 9999999765 3489999999999999999999999999999999999999999999999999864321
Q ss_pred --------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 --------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 --------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+. ...+|+|++|++++|+++ |..||.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 200 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYK 200 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 1111 124689999999999997 999985
No 277
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.93 E-value=3.2e-25 Score=218.03 Aligned_cols=177 Identities=31% Similarity=0.463 Sum_probs=148.3
Q ss_pred cccccCCCCceEEEEEEEc----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 310 PIKPLGCGDTGSVHLVELQ----GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 310 ~~~~LG~G~fG~Vy~a~~~----~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
+.+.||.|.||.||+|.+. ..+..|++|.++.. ......+.+..|++++++++||||+++++++......++||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeecccccccccccccccccccccccccccccc
Confidence 5678999999999999998 44678999999543 23445788999999999999999999999999888899999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
||+++|+|.++|.......+++.....++.|++.||.|||+++++|+||+|+|||++.++.+||+|||++.....
T Consensus 81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~ 160 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK 160 (259)
T ss_dssp E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999987445689999999999999999999999999999999999999999999999999876521
Q ss_pred ------------CCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 461 ------------KPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 ------------~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+ ....+|+|++|.+++|+++ |..||.
T Consensus 161 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~ 207 (259)
T PF07714_consen 161 NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFS 207 (259)
T ss_dssp ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 111 1124489999999999998 778874
No 278
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.93 E-value=3.6e-25 Score=222.05 Aligned_cols=177 Identities=23% Similarity=0.361 Sum_probs=154.6
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
.+|++.+.||.|+||.||+|.+..+++.|++|.+.... ......+.+|+.+++.++||||+++++++......|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 46999999999999999999999999999999986542 223466788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
||+++++|..++... .+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.....
T Consensus 96 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 172 (296)
T cd06655 96 EYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKR 172 (296)
T ss_pred EecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccC
Confidence 999999999998753 478999999999999999999999999999999999999999999999998753211
Q ss_pred ----------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ----------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ----------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~ 216 (296)
T cd06655 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYL 216 (296)
T ss_pred CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 1221 134689999999999999999985
No 279
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.93 E-value=2e-25 Score=230.36 Aligned_cols=170 Identities=23% Similarity=0.377 Sum_probs=144.5
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
.+|++++.||+|+||.||+|.+..+++.||+|...+. ....|+.+++.++||||+++++++......++||
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 4699999999999999999999999999999975432 1245889999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
|++ .++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 137 e~~-~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 214 (357)
T PHA03209 137 PHY-SSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFL 214 (357)
T ss_pred Ecc-CCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCcccc
Confidence 999 569999887643 458999999999999999999999999999999999999999999999999986321
Q ss_pred --------CCCcee------ecccccchHHHHHHHHhCCcc
Q 042772 460 --------CKPQVF------YHAHVNGFYFIMYKWLTGYFT 486 (489)
Q Consensus 460 --------~~~~~~------~~~~v~s~g~~a~e~~~G~lp 486 (489)
.+|+.+ ..+|+|++|+++++++++..+
T Consensus 215 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~ 255 (357)
T PHA03209 215 GLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPST 255 (357)
T ss_pred cccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCc
Confidence 112222 345889999999999875433
No 280
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.93 E-value=4.9e-25 Score=218.08 Aligned_cols=177 Identities=24% Similarity=0.377 Sum_probs=153.4
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
-|+..+.||.|+||.||+|.+..++..||+|.+.... .......+.+|+.+++.++||||+++++++......++|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 3788899999999999999999899999999886542 23445678889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------- 459 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------- 459 (489)
|+++++|.+++... .+++..+..++.|++.|+.|||+.|++|+||||+||+++.++.++|+|||++....
T Consensus 83 ~~~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06641 83 YLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred eCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhc
Confidence 99999999998753 47899999999999999999999999999999999999999999999999885321
Q ss_pred --------CCCcee------ecccccchHHHHHHHHhCCcccC
Q 042772 460 --------CKPQVF------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --------~~~~~~------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+.. ..+|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~ 202 (277)
T cd06641 160 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHS 202 (277)
T ss_pred cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence 112221 23589999999999999999984
No 281
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.93 E-value=6.3e-25 Score=213.08 Aligned_cols=173 Identities=21% Similarity=0.374 Sum_probs=146.1
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGG 391 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~gg 391 (489)
+.||+|+||.||+|... ++..+|+|.+.... .......+..|+.+++.++||||+++++++......++||||++++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 46899999999999865 58899999886543 2333456788999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----------
Q 042772 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----------- 460 (489)
Q Consensus 392 sL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----------- 460 (489)
+|.+++.... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.....
T Consensus 78 ~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05085 78 DFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI 156 (250)
T ss_pred cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence 9999987653 3478999999999999999999999999999999999999999999999999853211
Q ss_pred -----CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 -----KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 -----~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+|+. ....|+|++|++++++++ |..||.
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~ 196 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYP 196 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCC
Confidence 1111 123589999999999987 998884
No 282
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.93 E-value=4.1e-25 Score=217.68 Aligned_cols=180 Identities=21% Similarity=0.306 Sum_probs=152.0
Q ss_pred cCcccccccCCCCceEEEEEEEcC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCe
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQG-----AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTH 380 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~-----tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 380 (489)
.+|++++.||.|+||.||+|..+. +.+.+++|.+.... .......+..|+.++++++||||+++++++.....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 579999999999999999999764 35689999886532 23356778899999999999999999999998889
Q ss_pred EEEEEecCCCCCHHHHHhhCCC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecC
Q 042772 381 ICLITDFCPGGELFALLDKQPM-------KIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFD 453 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~-------~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFG 453 (489)
.|+||||+++|+|.+++..... ..+++..+..++.|++.||.|||+.+|+||||||+||+++.++.++|+|||
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~ 162 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLS 162 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccc
Confidence 9999999999999999986541 148999999999999999999999999999999999999999999999999
Q ss_pred CccccC----------------CCCce------eecccccchHHHHHHHHh-CCccc
Q 042772 454 LSFMTS----------------CKPQV------FYHAHVNGFYFIMYKWLT-GYFTY 487 (489)
Q Consensus 454 lS~~~~----------------~~~~~------~~~~~v~s~g~~a~e~~~-G~lpY 487 (489)
++.... .+|+. ...+|+|++|++++++++ |..||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~ 219 (275)
T cd05046 163 LSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPF 219 (275)
T ss_pred cccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 975321 11111 223589999999999987 77777
No 283
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.93 E-value=3.4e-25 Score=216.61 Aligned_cols=179 Identities=26% Similarity=0.410 Sum_probs=156.5
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|+..+.||.|+||.||+|.++.+++.+|+|.+..... ......+.+|+++++.++||||+++++.+......+++||
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 68889999999999999999999999999999876532 3455678889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~-~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
|+++++|.+++.... ..+++..+..++.|++.||.|||+ .|++|+||||+||+++.++.++|+|||.+....
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~ 158 (265)
T cd06605 80 YMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT 158 (265)
T ss_pred ecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhc
Confidence 999999999998753 458999999999999999999999 999999999999999999999999999875321
Q ss_pred -------CCCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 -------CKPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 -------~~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+ .....|+|++|.+++++++|..||.
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~ 200 (265)
T cd06605 159 FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYP 200 (265)
T ss_pred ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 1121 1234599999999999999999985
No 284
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.93 E-value=3.8e-25 Score=219.86 Aligned_cols=183 Identities=20% Similarity=0.315 Sum_probs=152.4
Q ss_pred cccCcccccccCCCCceEEEEEEEcC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQG-----AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS 378 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~-----tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 378 (489)
..++|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 34679999999999999999999753 57899999886542 234456788899999999999999999999998
Q ss_pred CeEEEEEecCCCCCHHHHHhhCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 042772 379 THICLITDFCPGGELFALLDKQP--------------------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPEN 438 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~~--------------------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~N 438 (489)
...+++|||+++|+|.+++.... ...+++..+..++.|++.||.|||+++++||||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 89999999999999999997531 1236788899999999999999999999999999999
Q ss_pred EEEecCCcEEEEecCCccccCC-----------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 439 ILLQKDGHVVLTDFDLSFMTSC-----------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 439 ILld~~g~vKL~DFGlS~~~~~-----------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
|+++.++.++|+|||++..... +|+. ...+|+|++|++++++++ |..||.
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~ 234 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYY 234 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999863210 1111 123589999999999986 877873
No 285
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.93 E-value=5.1e-25 Score=219.74 Aligned_cols=181 Identities=21% Similarity=0.279 Sum_probs=151.8
Q ss_pred ccCcccccccCCCCceEEEEEEEcC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQG-----AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST 379 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~-----tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 379 (489)
..+|.+.+.||+|+||.||+|.... ++..+++|.+... .....+.+.+|+++++.++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 80 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc---cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 4568899999999999999998643 4567889987543 2334466888999999999999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC
Q 042772 380 HICLITDFCPGGELFALLDKQP--------------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG 445 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~--------------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g 445 (489)
..++||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL 160 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence 9999999999999999997642 13378999999999999999999999999999999999999999
Q ss_pred cEEEEecCCccccC-----------------CCCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 446 HVVLTDFDLSFMTS-----------------CKPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 446 ~vKL~DFGlS~~~~-----------------~~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.++|+|||++.... .+|+. ...+|+|++|++++++++ |..||.
T Consensus 161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 227 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 227 (291)
T ss_pred cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999985321 11221 124689999999999997 999973
No 286
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.93 E-value=7.5e-25 Score=215.93 Aligned_cols=175 Identities=23% Similarity=0.352 Sum_probs=145.6
Q ss_pred cccCCCCceEEEEEEEcCCCc--EEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeEEEEEecC
Q 042772 312 KPLGCGDTGSVHLVELQGAGE--LYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHICLITDFC 388 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~--~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lVmEy~ 388 (489)
+.||+|+||.||+|.++.++. .+++|.+... ........+..|+.++.++ +||||+++++++.....++++|||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 368999999999999988775 4688877532 2344556788899999999 7999999999999999999999999
Q ss_pred CCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCC
Q 042772 389 PGGELFALLDKQP--------------MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454 (489)
Q Consensus 389 ~ggsL~~~L~~~~--------------~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGl 454 (489)
++|+|.+++.... ...+++..+..++.|++.||+|||+.|++||||||+||++++++.+||+|||+
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCC
Confidence 9999999997542 12478999999999999999999999999999999999999999999999999
Q ss_pred ccccC--------------CCCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 455 SFMTS--------------CKPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 455 S~~~~--------------~~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
+.... .+|+. ....|+|++|++++++++ |..||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~ 213 (270)
T cd05047 159 SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 213 (270)
T ss_pred ccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCcc
Confidence 84211 11211 134589999999999996 999884
No 287
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.93 E-value=6.4e-25 Score=212.91 Aligned_cols=179 Identities=26% Similarity=0.365 Sum_probs=152.5
Q ss_pred cccccccCCCCceEEEEEEEcCCC----cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEE
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAG----ELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg----~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 383 (489)
+++.+.||.|+||.||++.+..++ ..+|+|.+.... .......+..|+.+++.++||||+++++++...+..++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA--DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC--ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 457789999999999999998766 899999986542 22256788889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC--
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK-- 461 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~-- 461 (489)
+|||+++++|.+++.......+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++......
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 999999999999998754333899999999999999999999999999999999999999999999999998643211
Q ss_pred --------------Cc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 462 --------------PQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 462 --------------~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
|+ ....+|+|++|++++++++ |..||.
T Consensus 159 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~ 206 (258)
T smart00219 159 YKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYP 206 (258)
T ss_pred cccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 11 1123588999999999987 788874
No 288
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.93 E-value=1e-24 Score=220.70 Aligned_cols=180 Identities=24% Similarity=0.312 Sum_probs=154.8
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
.|...+.||+|+||.||+|.+..++..+|+|.+.............+..|+++++.++|||++++++++......++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 48899999999999999999999999999999876544444556678889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------ 460 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------ 460 (489)
|++ |+|.+++.... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.....
T Consensus 106 ~~~-g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (317)
T cd06635 106 YCL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVG 183 (317)
T ss_pred CCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCcccccC
Confidence 996 58888876543 3489999999999999999999999999999999999999999999999998754321
Q ss_pred -----CCce---------eecccccchHHHHHHHHhCCcccC
Q 042772 461 -----KPQV---------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -----~~~~---------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 184 ~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~ 225 (317)
T cd06635 184 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 225 (317)
T ss_pred CccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 1222 234589999999999999999874
No 289
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.93 E-value=2.4e-25 Score=222.93 Aligned_cols=176 Identities=24% Similarity=0.385 Sum_probs=151.5
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
.|.....||+|+||.||++....++..||+|.+... .......+..|+.+++.++||||+++++.+...+..|+|||
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e 99 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR---KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVME 99 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc---hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEe
Confidence 455567899999999999999999999999988653 23345667889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------ 460 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------ 460 (489)
|+++++|.+++... .+++..+..++.||+.||.|||++||+||||||+||++++++.++|+|||++.....
T Consensus 100 ~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~ 176 (292)
T cd06658 100 FLEGGALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK 176 (292)
T ss_pred CCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCc
Confidence 99999999988653 378999999999999999999999999999999999999999999999998853210
Q ss_pred ---------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 ---------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ ....+|+|++|++++++++|..||.
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~ 219 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYF 219 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 111 1234699999999999999999984
No 290
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.93 E-value=4.8e-25 Score=219.43 Aligned_cols=181 Identities=18% Similarity=0.284 Sum_probs=150.6
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCCe----
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTSTH---- 380 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~---- 380 (489)
++|++.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++.+. ||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 368999999999999999999999999999998865422 2223456778999999995 6999999999887655
Q ss_pred -EEEEEecCCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEEecCCc
Q 042772 381 -ICLITDFCPGGELFALLDKQP---MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQK-DGHVVLTDFDLS 455 (489)
Q Consensus 381 -~~lVmEy~~ggsL~~~L~~~~---~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~-~g~vKL~DFGlS 455 (489)
.|++|||+++ +|.+++.... ...+++..++.++.||+.||.|||++|++||||||+||+++. ++.+||+|||++
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence 8999999975 8999887542 235899999999999999999999999999999999999998 889999999988
Q ss_pred cccC---------------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 456 FMTS---------------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 456 ~~~~---------------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.... .+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~ 213 (295)
T cd07837 159 RAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFP 213 (295)
T ss_pred eecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCC
Confidence 6321 11221 234689999999999999998883
No 291
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.93 E-value=3.2e-25 Score=236.68 Aligned_cols=170 Identities=19% Similarity=0.249 Sum_probs=145.4
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
..|.+.+.||+|+||.||+|.+..+++.||+|.... ..+.+|+.++++++||||+++++++......++||
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 469999999999999999999999999999995421 23457999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
|++ .++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 240 e~~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~ 317 (461)
T PHA03211 240 PKY-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP 317 (461)
T ss_pred Ecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence 999 579999987653 3589999999999999999999999999999999999999999999999999864321
Q ss_pred ------------CCc------eeecccccchHHHHHHHHhCCcc
Q 042772 461 ------------KPQ------VFYHAHVNGFYFIMYKWLTGYFT 486 (489)
Q Consensus 461 ------------~~~------~~~~~~v~s~g~~a~e~~~G~lp 486 (489)
.|+ ....+|+|++|++++|+++|..+
T Consensus 318 ~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~ 361 (461)
T PHA03211 318 FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTAS 361 (461)
T ss_pred cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCC
Confidence 011 11235899999999999887654
No 292
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.8e-25 Score=250.17 Aligned_cols=182 Identities=23% Similarity=0.305 Sum_probs=156.9
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCC-----cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAG-----ELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST 379 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg-----~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 379 (489)
....++.+.||+|.||.||.|...+.. ..||+|.+.+. .+......|..|..+|+.++|||||+++|.+.+..
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~ 768 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG 768 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence 456788899999999999999987532 24889988654 46778899999999999999999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCC
Q 042772 380 HICLITDFCPGGELFALLDKQ-----PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~-----~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGl 454 (489)
..+|++|||+||+|..+|++. ....++......++.|||.|+.||+++++|||||..+|+||++...+||+|||+
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccch
Confidence 999999999999999999875 123478899999999999999999999999999999999999999999999999
Q ss_pred ccccCCC-----------Ccee------------ecccccchHHHHHHH-HhCCcccC
Q 042772 455 SFMTSCK-----------PQVF------------YHAHVNGFYFIMYKW-LTGYFTYV 488 (489)
Q Consensus 455 S~~~~~~-----------~~~~------------~~~~v~s~g~~a~e~-~~G~lpY~ 488 (489)
|+.+... |-.| ..+|+|+||+.++|+ .+|..||.
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~ 906 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYP 906 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCC
Confidence 9833210 1112 355999999999998 59999996
No 293
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.93 E-value=1e-24 Score=210.48 Aligned_cols=179 Identities=30% Similarity=0.390 Sum_probs=157.4
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC--CeEEEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS--THICLI 384 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~~lV 384 (489)
+|+..+.||+|++|.||+|.+..+++.+++|.+..... .....+.+.+|+.++++++||||+++++.+... ...+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 47888999999999999999999999999999876532 245677888999999999999999999999888 889999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC---
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK--- 461 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~--- 461 (489)
|||+++++|.+++.... .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 99999999999998764 5899999999999999999999999999999999999999999999999988644322
Q ss_pred --------------Cc------eeecccccchHHHHHHHHhCCcccC
Q 042772 462 --------------PQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 --------------~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+ ....+|+|++|++++++++|..||.
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 204 (260)
T cd06606 158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWS 204 (260)
T ss_pred ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 11 1234689999999999999999985
No 294
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.93 E-value=1.1e-24 Score=214.18 Aligned_cols=181 Identities=24% Similarity=0.292 Sum_probs=152.5
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEE
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~l 383 (489)
..+.+.....||+|+||.||+|.+..++..||+|.+... .....+.+.+|+.+++.++||||+++++++......++
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC---CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 344555667899999999999999999999999988654 23345678889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEEecCCccccC-
Q 042772 384 ITDFCPGGELFALLDKQPMKIF--REDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQK-DGHVVLTDFDLSFMTS- 459 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l--~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~-~g~vKL~DFGlS~~~~- 459 (489)
+|||+++++|.+++.... ..+ ++..+..++.|++.||.|||++||+||||||+||+++. ++.++|+|||++....
T Consensus 83 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~ 161 (268)
T cd06624 83 FMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG 161 (268)
T ss_pred EEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheeccc
Confidence 999999999999997642 224 78888999999999999999999999999999999976 6799999999875321
Q ss_pred --------------CCCce--------eecccccchHHHHHHHHhCCcccC
Q 042772 460 --------------CKPQV--------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --------------~~~~~--------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|.+++++++|..||.
T Consensus 162 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~ 212 (268)
T cd06624 162 INPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFI 212 (268)
T ss_pred CCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCc
Confidence 11222 234689999999999999999984
No 295
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.93 E-value=8.3e-25 Score=212.69 Aligned_cols=181 Identities=22% Similarity=0.390 Sum_probs=154.3
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe--CCeEEEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT--STHICLI 384 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--~~~~~lV 384 (489)
+|++.+.||.|+||.||+|.+..+++.+|+|.+..... .....+.+..|+++++.++||||+++++.+.. ....+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 48889999999999999999999999999999876533 34455678889999999999999999997764 4578999
Q ss_pred EecCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeecCCCCCCEEEecCCcEEEEecCCccc
Q 042772 385 TDFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIGLEYLH-----CLGIIYRDLKPENILLQKDGHVVLTDFDLSFM 457 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH-----~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~ 457 (489)
|||+++++|.+++... ....+++..++.++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 9999999999999763 2345899999999999999999999 89999999999999999999999999999865
Q ss_pred cCCC---------------Cce------eecccccchHHHHHHHHhCCcccC
Q 042772 458 TSCK---------------PQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 458 ~~~~---------------~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.... |+. ....|+|++|.+++++++|..||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 211 (265)
T cd08217 160 LGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFT 211 (265)
T ss_pred ccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCccc
Confidence 4311 111 123589999999999999999985
No 296
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.93 E-value=1.1e-24 Score=216.88 Aligned_cols=180 Identities=26% Similarity=0.353 Sum_probs=152.1
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeC-----
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTS----- 378 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~----- 378 (489)
.++|.+.+.||+|+||.||+|....+++.+|+|.+.... .....+..|+.++..+ +|||++++++++...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 567999999999999999999999999999999986532 1234566788899888 799999999998753
Q ss_pred CeEEEEEecCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcc
Q 042772 379 THICLITDFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSF 456 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~ 456 (489)
...++||||+++++|.+++... ....+++..++.++.|++.||.|||+.|++|+||||+||+++.++.+||+|||++.
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~ 176 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence 3689999999999999988642 23458999999999999999999999999999999999999999999999999875
Q ss_pred ccC---------------CCCce-----------eecccccchHHHHHHHHhCCcccC
Q 042772 457 MTS---------------CKPQV-----------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 457 ~~~---------------~~~~~-----------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
... .+|+. ...+|+|++|++++++++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~ 234 (291)
T cd06639 177 QLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLF 234 (291)
T ss_pred hcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCC
Confidence 321 12322 235699999999999999999984
No 297
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.93 E-value=5.9e-25 Score=220.93 Aligned_cols=181 Identities=24% Similarity=0.326 Sum_probs=149.3
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCc----EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGE----LYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST 379 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~----~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 379 (489)
...+|+..+.||+|+||.||+|.+..++. .+|+|.+.... .......+..|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~- 81 (303)
T cd05110 5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP- 81 (303)
T ss_pred chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-
Confidence 34679999999999999999999887776 56888876442 233345678899999999999999999988654
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
..++++||+++|+|.+++.... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.+||+|||+++...
T Consensus 82 ~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 82 TIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred CceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEcccccccccc
Confidence 4789999999999999997653 347899999999999999999999999999999999999999999999999996432
Q ss_pred C-----------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 460 C-----------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 460 ~-----------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
. +|+. ...+|+|++|++++++++ |..||.
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~ 213 (303)
T cd05110 161 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 213 (303)
T ss_pred CcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 1 0111 123488999999999886 888884
No 298
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.93 E-value=6e-25 Score=221.17 Aligned_cols=171 Identities=22% Similarity=0.354 Sum_probs=139.3
Q ss_pred cccCCCCceEEEEEEEcC--CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe--CCeEEEEEec
Q 042772 312 KPLGCGDTGSVHLVELQG--AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT--STHICLITDF 387 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~--tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--~~~~~lVmEy 387 (489)
..||+|+||.||+|..+. ++..||+|.+..... ...+.+|+.+++.++||||+++++++.. ...++++|||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 579999999999999764 568999998865421 2346679999999999999999998854 4678999999
Q ss_pred CCCCCHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE----ecCCcEEEEecCCcc
Q 042772 388 CPGGELFALLDKQ-------PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILL----QKDGHVVLTDFDLSF 456 (489)
Q Consensus 388 ~~ggsL~~~L~~~-------~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILl----d~~g~vKL~DFGlS~ 456 (489)
++ ++|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 82 AE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred eC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 95 5888887532 12347899999999999999999999999999999999999 566799999999986
Q ss_pred ccC------------------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 457 MTS------------------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 457 ~~~------------------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
... .+|+. ...+|+|++|++++++++|..||.
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~ 217 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence 432 12222 123599999999999999999984
No 299
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.93 E-value=1.5e-25 Score=233.37 Aligned_cols=183 Identities=21% Similarity=0.335 Sum_probs=156.1
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 382 (489)
+..+...+.+.||+|-||.|++|+..+ +..||+|.++... ..+....|..|+.+|.+|+||||+.++++|..++.+|
T Consensus 535 fPRs~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 535 FPRSRLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDA--TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLC 611 (807)
T ss_pred cchhheehhhhhcCcccceeEEEEecC-ceEEEEeecCccc--chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchH
Confidence 344567888999999999999999875 7899999997653 4455688999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCCC
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKP 462 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~~ 462 (489)
+||||++.|+|.+++..+....+.......|+.||+.||+||.+.++|||||.++|+|++.++++||+|||+|+-+...+
T Consensus 612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCC
Confidence 99999999999999988743334566677799999999999999999999999999999999999999999998554322
Q ss_pred -----------------------ceeecccccchHHHHHHHH--hCCcccC
Q 042772 463 -----------------------QVFYHAHVNGFYFIMYKWL--TGYFTYV 488 (489)
Q Consensus 463 -----------------------~~~~~~~v~s~g~~a~e~~--~G~lpY~ 488 (489)
.....+|+|.+|.+++|++ |...||.
T Consensus 692 yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~ 742 (807)
T KOG1094|consen 692 YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYS 742 (807)
T ss_pred ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchh
Confidence 1224569999999999974 6777774
No 300
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=4.7e-26 Score=237.09 Aligned_cols=180 Identities=23% Similarity=0.284 Sum_probs=154.4
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
..|.-++.||.|+||.||-|.+..+.+.||||.++.+........+.+..|+..|+++.|||++.+-+||..+...||||
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM 105 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM 105 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence 34888999999999999999999999999999998876667777889999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
||| -|+-.+++.-.. +++.+..+..|..+.+.||.|||+.+.||||||..|||+++.|.|||+|||.|.+...
T Consensus 106 EYC-lGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFv 183 (948)
T KOG0577|consen 106 EYC-LGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFV 183 (948)
T ss_pred HHH-hccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCchhccc
Confidence 999 568888887653 5689999999999999999999999999999999999999999999999999865431
Q ss_pred CCceee---------------cccccchHHHHHHHHhCCccc
Q 042772 461 KPQVFY---------------HAHVNGFYFIMYKWLTGYFTY 487 (489)
Q Consensus 461 ~~~~~~---------------~~~v~s~g~~a~e~~~G~lpY 487 (489)
+..+|+ ..|||++|.+..|++--..|+
T Consensus 184 GTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPl 225 (948)
T KOG0577|consen 184 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 225 (948)
T ss_pred CCccccchhHheeccccccCCccceeeccchhhhhhhcCCCc
Confidence 122332 336677776666666555554
No 301
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.93 E-value=1.7e-24 Score=209.31 Aligned_cols=181 Identities=30% Similarity=0.534 Sum_probs=157.7
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++.+.||.|+||.||++.+..++..+++|.+..... .......+..|+++++.++|||++++++.+......+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 48889999999999999999999999999999976433 23455678889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC---
Q 042772 387 FCPGGELFALLDKQP--MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK--- 461 (489)
Q Consensus 387 y~~ggsL~~~L~~~~--~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~--- 461 (489)
|+++++|.+++.... ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 159 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL 159 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCcce
Confidence 999999999998753 356899999999999999999999999999999999999999999999999998643211
Q ss_pred ------------Cc------eeecccccchHHHHHHHHhCCcccC
Q 042772 462 ------------PQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 ------------~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+ .....|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~ 204 (258)
T cd08215 160 AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFE 204 (258)
T ss_pred ecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCC
Confidence 11 1234689999999999999999985
No 302
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.93 E-value=1.1e-24 Score=215.54 Aligned_cols=184 Identities=18% Similarity=0.204 Sum_probs=154.2
Q ss_pred ccccCcccccccCCCCceEEEEEEEcC----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe-
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQG----AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT- 377 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~----tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~- 377 (489)
+..++|++.+.||+|+||.||+|.+.. ++..|++|.+... ........+.+|..+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 345689999999999999999999876 3588999988643 244556778889999999999999999998765
Q ss_pred CCeEEEEEecCCCCCHHHHHhhCCC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEe
Q 042772 378 STHICLITDFCPGGELFALLDKQPM------KIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTD 451 (489)
Q Consensus 378 ~~~~~lVmEy~~ggsL~~~L~~~~~------~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~D 451 (489)
....+++++|+++++|.+++..... ..+++..+..++.|++.||.|||+++++|+||||+||++++++.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECC
Confidence 4678999999999999999976422 3588999999999999999999999999999999999999999999999
Q ss_pred cCCccccCC-----------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 452 FDLSFMTSC-----------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 452 FGlS~~~~~-----------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
||+++.... +|+. ...+|+|++|++++++++ |..||.
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 221 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYV 221 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcC
Confidence 999974321 1111 134589999999999997 999884
No 303
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.93 E-value=7.7e-25 Score=222.70 Aligned_cols=176 Identities=21% Similarity=0.277 Sum_probs=149.3
Q ss_pred cccCCC--CceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCC
Q 042772 312 KPLGCG--DTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCP 389 (489)
Q Consensus 312 ~~LG~G--~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ 389 (489)
..||.| +||+||+|.+..+|+.||+|++..... .....+.+.+|+.+++.++||||++++++|......++||||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 456666 999999999999999999999875433 23455788889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcccc-----------
Q 042772 390 GGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT----------- 458 (489)
Q Consensus 390 ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~----------- 458 (489)
+++|.+++.+.....+++..+..++.|++.||.|||++|++||||||+||+++.++.++++||+.+...
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVY 162 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccc
Confidence 999999998764455899999999999999999999999999999999999999999999999743211
Q ss_pred -----------CCCCce--------eecccccchHHHHHHHHhCCcccC
Q 042772 459 -----------SCKPQV--------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 -----------~~~~~~--------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
...|+. ....|+|++|++++++++|..||.
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~ 211 (328)
T cd08226 163 DFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQ 211 (328)
T ss_pred cccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 011222 234599999999999999999985
No 304
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.93 E-value=1.4e-24 Score=210.75 Aligned_cols=173 Identities=23% Similarity=0.369 Sum_probs=148.0
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGG 391 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~gg 391 (489)
+.||.|+||.||+|.+.. ++.||+|.+..... ......+..|+.++++++||||+++++++......++||||++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 468999999999999988 99999998865432 235567888999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------------
Q 042772 392 ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------------ 459 (489)
Q Consensus 392 sL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------------ 459 (489)
+|.+++.... ..+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++....
T Consensus 78 ~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (251)
T cd05041 78 SLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ 156 (251)
T ss_pred cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence 9999997643 347899999999999999999999999999999999999999999999999886332
Q ss_pred -----CCCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 460 -----CKPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 460 -----~~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++ |..||.
T Consensus 157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~ 197 (251)
T cd05041 157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYP 197 (251)
T ss_pred ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCc
Confidence 11211 124589999999999998 888874
No 305
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=6.9e-27 Score=239.97 Aligned_cols=185 Identities=33% Similarity=0.582 Sum_probs=166.7
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeE
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 381 (489)
.+.+.+++.+..||-|+||.|-++..+.....+|+|++++....+......+..|..||..++.|+||++|..|.++.++
T Consensus 416 ~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyv 495 (732)
T KOG0614|consen 416 QVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYV 495 (732)
T ss_pred ccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhh
Confidence 45677899999999999999999999876667999999998888888888899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC- 460 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~- 460 (489)
|++||-|-||+|+..|..+ +.|++.++++++..++.|++|||++|||+|||||+|++++.+|.+||.|||+|..+..
T Consensus 496 YmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred hhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999999999886 4499999999999999999999999999999999999999999999999999975432
Q ss_pred --------CCceeec-----------ccccchHHHHHHHHhCCcccC
Q 042772 461 --------KPQVFYH-----------AHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 --------~~~~~~~-----------~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.|++..+ .|.|++|..++|+++|..||.
T Consensus 574 ~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs 620 (732)
T KOG0614|consen 574 RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFS 620 (732)
T ss_pred CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCC
Confidence 2333333 377999999999999999995
No 306
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.93 E-value=1.6e-25 Score=208.21 Aligned_cols=190 Identities=26% Similarity=0.380 Sum_probs=157.7
Q ss_pred hcCCCccccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHh-CCCCCcceeeEE
Q 042772 296 ITGSGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL-LDHPFLPTLYAS 374 (489)
Q Consensus 296 ~~~~~~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~l~~~ 374 (489)
+..++.++.-++...+..||+|++|.|-+.++..+|...|+|.+.... +.+..++..+|+.+..+ .++|++|++|+.
T Consensus 36 I~~~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa 113 (282)
T KOG0984|consen 36 IGDRNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGA 113 (282)
T ss_pred EecCccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehh
Confidence 444445666677888899999999999999999999999999996553 34556778889888665 479999999999
Q ss_pred EEeCCeEEEEEecCCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEe
Q 042772 375 FQTSTHICLITDFCPGGELFALLDK--QPMKIFREDSARFYAAEVVIGLEYLHCL-GIIYRDLKPENILLQKDGHVVLTD 451 (489)
Q Consensus 375 ~~~~~~~~lVmEy~~ggsL~~~L~~--~~~~~l~e~~~~~i~~qI~~aL~yLH~~-gIvHrDLKP~NILld~~g~vKL~D 451 (489)
+..+..+++.||.+ ..+|..+-.+ ..++.++|..+-.|+..++.||.|||++ .++|||+||+||||+.+|++|+||
T Consensus 114 ~~regdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCD 192 (282)
T KOG0984|consen 114 LFREGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICD 192 (282)
T ss_pred hhccccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcc
Confidence 99999999999999 5588766543 2346689999999999999999999965 799999999999999999999999
Q ss_pred cCCccccC----------CC----C----------ceeecccccchHHHHHHHHhCCcccC
Q 042772 452 FDLSFMTS----------CK----P----------QVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 452 FGlS~~~~----------~~----~----------~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
||+|-.+. |. | .+.-.+|+|++|.++.|++++..||.
T Consensus 193 FGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 193 FGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred cccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence 99984221 11 1 23345699999999999999999997
No 307
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.93 E-value=8e-25 Score=212.70 Aligned_cols=181 Identities=24% Similarity=0.446 Sum_probs=155.4
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|.+.+.||+|+||.||+|..+.+|..+|+|.+..... .......+.+|+.+++.++||||+++++.+......++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM-PVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc-cchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 48889999999999999999999999999999876432 22344567789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEEecCCccccCC-----
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG-HVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g-~vKL~DFGlS~~~~~----- 460 (489)
|+++++|.+++.......+++..+..++.|++.||.|||+.+++|+||||+||++++++ .+||+|||.+.....
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA 159 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccc
Confidence 99999999999876555689999999999999999999999999999999999999886 469999998854321
Q ss_pred ----------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ----------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ----------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 203 (257)
T cd08225 160 YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFE 203 (257)
T ss_pred cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 1221 124589999999999999999985
No 308
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.93 E-value=1.1e-24 Score=212.01 Aligned_cols=178 Identities=25% Similarity=0.366 Sum_probs=150.9
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
..+|++.+.||+|+||.||+|.+.. +..+|+|.+...... ...+..|+++++.++|||++++++++......+++
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV 77 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEE
Confidence 3478999999999999999998864 678999988654322 24577899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC---- 460 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~---- 460 (489)
|||+++++|.+++.... ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||++.....
T Consensus 78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 156 (256)
T cd05112 78 FEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT 156 (256)
T ss_pred EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence 99999999999997653 3478999999999999999999999999999999999999999999999998763211
Q ss_pred ------------CCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 461 ------------KPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 461 ------------~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.|+. ...+|+|++|.+++++++ |..||.
T Consensus 157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~ 203 (256)
T cd05112 157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYE 203 (256)
T ss_pred ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCC
Confidence 1221 123689999999999987 999885
No 309
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.93 E-value=8.8e-25 Score=218.79 Aligned_cols=177 Identities=24% Similarity=0.361 Sum_probs=153.8
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|.+.+.||+|+||.||++....+++.||+|.+... .....+.+..|+.+++.++||||+++++.+......|+|+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc---cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 5799999999999999999999888999999998643 2233466788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
||+++++|.+++.+. .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++....
T Consensus 96 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~ 172 (293)
T cd06647 96 EYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 172 (293)
T ss_pred ecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccccc
Confidence 999999999998763 37899999999999999999999999999999999999999999999999874321
Q ss_pred ---------CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ---------CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ....|+|++|++++++++|..||.
T Consensus 173 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~ 216 (293)
T cd06647 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYL 216 (293)
T ss_pred ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 11221 134699999999999999999985
No 310
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.93 E-value=7.2e-25 Score=220.48 Aligned_cols=182 Identities=25% Similarity=0.335 Sum_probs=152.1
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC--CeE
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS--THI 381 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~ 381 (489)
..++|++.+.||+|+||.||+|.+..+|+.||+|.+...... ......+.+|+.+++.++||||+++++++... ..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER-DGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC-CCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 456899999999999999999999999999999998654321 12223456799999999999999999998765 568
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC- 460 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~- 460 (489)
++||||+. ++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||++.....
T Consensus 84 ~lv~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 84 FLVMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 99999995 58998887643 4589999999999999999999999999999999999999999999999998864321
Q ss_pred --------------CCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 461 --------------KPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 --------------~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~ 210 (309)
T cd07845 162 AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLP 210 (309)
T ss_pred cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCC
Confidence 1221 234589999999999999999884
No 311
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.93 E-value=8.5e-26 Score=235.00 Aligned_cols=179 Identities=27% Similarity=0.418 Sum_probs=152.0
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchH-----HHHHHHHHHHHHHhCC---CCCcceeeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-----KVHRACIEREIMSLLD---HPFLPTLYASFQ 376 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~-----~~~~~~~E~~il~~l~---HpnIv~l~~~~~ 376 (489)
..+|..++++|.|+||.|++|.++.....|++|.+.|....-.. .+..+-.|++||..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 45699999999999999999999999999999999887653222 2344667999999997 999999999999
Q ss_pred eCCeEEEEEecC-CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCc
Q 042772 377 TSTHICLITDFC-PGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455 (489)
Q Consensus 377 ~~~~~~lVmEy~-~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS 455 (489)
+++++||+||-- +|.+|+++++..+. ++|.++..|+.||+.|+++||++||||||||-+||+++.+|-+||+|||.|
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp~--m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsa 717 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKPR--MDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSA 717 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccCc--cchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccch
Confidence 999999999975 56799999998865 899999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCceeecccccchHHH--------------HHHHHhCCcccC
Q 042772 456 FMTSCKPQVFYHAHVNGFYFI--------------MYKWLTGYFTYV 488 (489)
Q Consensus 456 ~~~~~~~~~~~~~~v~s~g~~--------------a~e~~~G~lpY~ 488 (489)
..+...|-.. -+++.+|. -+.|++|.++|+
T Consensus 718 a~~ksgpfd~---f~gtv~~aapevl~g~~y~gk~qdiwalgillyt 761 (772)
T KOG1152|consen 718 AYTKSGPFDV---FVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYT 761 (772)
T ss_pred hhhcCCCcce---eeeeccccchhhhCCCccCCCcchhhhhhheeeE
Confidence 8776655332 22333344 356777887775
No 312
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.93 E-value=2e-25 Score=214.86 Aligned_cols=181 Identities=25% Similarity=0.417 Sum_probs=153.3
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeEE
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ 382 (489)
..++.+.+..||+|+.|+|+++..+.+|...|+|.+.+. .+....+++...+.++.+. ++|+||+.+|+|.....++
T Consensus 90 dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~ 167 (391)
T KOG0983|consen 90 DINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVF 167 (391)
T ss_pred ChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHH
Confidence 456778889999999999999999999999999999765 4566788888888887765 5899999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecCCccccC--
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-- 459 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~-~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-- 459 (489)
+.||.| ..-+..++++ ..++++|..+-.+...++.||.||-. +||+|||+||+|||+|+.|.|||||||+|-.+.
T Consensus 168 IcMelM-s~C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS 245 (391)
T KOG0983|consen 168 ICMELM-STCAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS 245 (391)
T ss_pred HHHHHH-HHHHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecc
Confidence 999988 3344455544 44669999999999999999999995 589999999999999999999999999984321
Q ss_pred --------C-------------CCceeecccccchHHHHHHHHhCCcccC
Q 042772 460 --------C-------------KPQVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --------~-------------~~~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
| .+.+--.+|||++|..+.|+++|..||.
T Consensus 246 kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~ 295 (391)
T KOG0983|consen 246 KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYK 295 (391)
T ss_pred cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCC
Confidence 1 2333445699999999999999999996
No 313
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.92 E-value=1.5e-24 Score=213.31 Aligned_cols=181 Identities=22% Similarity=0.268 Sum_probs=150.4
Q ss_pred cccCcccccccCCCCceEEEEEEEcCC---CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCe
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGA---GELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTH 380 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~t---g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 380 (489)
...+|.+.+.||+|+||.||+|.+... ...||+|...... .....+.+.+|+.+++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~ 80 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP 80 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CC
Confidence 345799999999999999999987644 4578999876442 24455678889999999999999999998875 45
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS- 459 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~- 459 (489)
.++||||+++|+|.+++.... ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 789999999999999997653 248999999999999999999999999999999999999999999999999885321
Q ss_pred ---------------CCCce------eecccccchHHHHHHHHh-CCcccC
Q 042772 460 ---------------CKPQV------FYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 460 ---------------~~~~~------~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++ |..||.
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~ 210 (270)
T cd05056 160 ESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQ 210 (270)
T ss_pred ccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCC
Confidence 11221 123589999999999874 999984
No 314
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.92 E-value=1.1e-24 Score=223.95 Aligned_cols=178 Identities=24% Similarity=0.406 Sum_probs=150.6
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC------
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------ 378 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~------ 378 (489)
.++|+..+.||+|+||.||+|.+..+++.||+|.+.+... .......+.+|+.+++.++||||++++++|...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ-NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc-ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4679999999999999999999999999999999865422 333456677899999999999999999988644
Q ss_pred CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcccc
Q 042772 379 THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~ 458 (489)
...|+||||+. ++|.+.+... +++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++...
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 168 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 168 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeC
Confidence 35799999995 5898888653 789999999999999999999999999999999999999999999999998643
Q ss_pred CC--------------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 459 SC--------------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 ~~--------------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.. +|+ ....+|+|++|++++++++|..||.
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~ 218 (353)
T cd07850 169 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFP 218 (353)
T ss_pred CCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCC
Confidence 21 111 1123599999999999999999884
No 315
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.92 E-value=2.8e-24 Score=206.62 Aligned_cols=178 Identities=30% Similarity=0.478 Sum_probs=156.4
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|+..+.||+|++|.||++.+..+++.+++|.+..... .....+.+|+.+++.++|||++++++++......++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 47888999999999999999998999999999976532 355778889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC-----
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK----- 461 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~----- 461 (489)
|+++++|.+++.... ..+++..+..++.|++.||.|||.+|++|+||+|+||+++.++.++|+|||.+......
T Consensus 78 ~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 156 (253)
T cd05122 78 FCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNT 156 (253)
T ss_pred cCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccc
Confidence 999999999998753 35899999999999999999999999999999999999999999999999988654321
Q ss_pred ---------Cc------eeecccccchHHHHHHHHhCCcccC
Q 042772 462 ---------PQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 ---------~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+ .....|+|++|.+++++++|..||.
T Consensus 157 ~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 198 (253)
T cd05122 157 MVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYS 198 (253)
T ss_pred eecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 11 1234699999999999999999885
No 316
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.92 E-value=1.2e-24 Score=211.70 Aligned_cols=170 Identities=17% Similarity=0.164 Sum_probs=141.5
Q ss_pred cccCCCCceEEEEEEEcCCC----------cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeE
Q 042772 312 KPLGCGDTGSVHLVELQGAG----------ELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg----------~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 381 (489)
+.||+|+||.||+|.+..++ ..+++|.+.... .....+.+|+.+++.++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 46899999999999998776 357778765432 115677889999999999999999999887 778
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-------cEEEEecCC
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG-------HVVLTDFDL 454 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g-------~vKL~DFGl 454 (489)
++||||+++|+|.+++..... .+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+|||+
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 999999999999999987643 488999999999999999999999999999999999999888 799999999
Q ss_pred ccccC-----------CCCce--------eecccccchHHHHHHHHh-CCccc
Q 042772 455 SFMTS-----------CKPQV--------FYHAHVNGFYFIMYKWLT-GYFTY 487 (489)
Q Consensus 455 S~~~~-----------~~~~~--------~~~~~v~s~g~~a~e~~~-G~lpY 487 (489)
+.... .+|+. ...+|+|++|++++++++ |..||
T Consensus 155 a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~ 207 (259)
T cd05037 155 PITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPL 207 (259)
T ss_pred ccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCc
Confidence 87522 12222 223688999999999988 56665
No 317
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.92 E-value=1.7e-24 Score=213.14 Aligned_cols=173 Identities=17% Similarity=0.221 Sum_probs=141.0
Q ss_pred cccCCCCceEEEEEEEcCC------------CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC
Q 042772 312 KPLGCGDTGSVHLVELQGA------------GELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST 379 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~t------------g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 379 (489)
+.||+|+||.||+|..... ...+++|.+... .......+..|..+++.++||||+++++++....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 4689999999999985432 235888887543 2334556778899999999999999999999988
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc-------EEEEec
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGH-------VVLTDF 452 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~-------vKL~DF 452 (489)
..+++|||+++|+|..++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++. ++++||
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999999999887643 34899999999999999999999999999999999999987664 899999
Q ss_pred CCccccC-----------CCCcee-------ecccccchHHHHHHHH-hCCcccC
Q 042772 453 DLSFMTS-----------CKPQVF-------YHAHVNGFYFIMYKWL-TGYFTYV 488 (489)
Q Consensus 453 GlS~~~~-----------~~~~~~-------~~~~v~s~g~~a~e~~-~G~lpY~ 488 (489)
|++.... .+|+.. ..+|+|++|+++++++ .|..||.
T Consensus 157 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~ 211 (262)
T cd05077 157 GIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLK 211 (262)
T ss_pred CCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 9985322 112222 2359999999999997 5888774
No 318
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.92 E-value=6e-26 Score=206.98 Aligned_cols=150 Identities=22% Similarity=0.393 Sum_probs=133.2
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
.|...+.||+|.||+|++|+...+++.||+|.+..... +...-....+|+-+++.++|.|||++++....+..+-+|+|
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 57778999999999999999999999999999865421 12223456789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
|| ..+|..+.+... +.++.+.++.++.|++.||.++|+++++||||||.|.||+.+|.+||+|||+|+...
T Consensus 82 ~c-dqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafg 152 (292)
T KOG0662|consen 82 FC-DQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFG 152 (292)
T ss_pred Hh-hHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcC
Confidence 99 569999998764 448999999999999999999999999999999999999999999999999998654
No 319
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.92 E-value=8.5e-25 Score=217.10 Aligned_cols=181 Identities=23% Similarity=0.344 Sum_probs=150.1
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCCeEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~l 383 (489)
.++|+..+.||+|+||.||++.+..+++.+|+|.+.+... ......+..|+.++.++. ||||+++++++..+...++
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI 80 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence 3568888999999999999999999999999999875432 244567788999999985 9999999999999999999
Q ss_pred EEecCCCCCHHHHH---hhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 384 ITDFCPGGELFALL---DKQPMKIFREDSARFYAAEVVIGLEYLHCL-GIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 384 VmEy~~ggsL~~~L---~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~-gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
+|||+. ++|.++. .......+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 81 ~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 81 CMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred EEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 999985 4665543 222335589999999999999999999974 99999999999999999999999999985321
Q ss_pred --------------CCCc---------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 --------------CKPQ---------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --------------~~~~---------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
..|+ ....+|+|++|++++++++|..||.
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 211 (288)
T cd06616 160 DSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYP 211 (288)
T ss_pred cCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCch
Confidence 1121 2234699999999999999999984
No 320
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.92 E-value=1.1e-24 Score=223.37 Aligned_cols=179 Identities=26% Similarity=0.394 Sum_probs=151.7
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC-----
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST----- 379 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~----- 379 (489)
.++|++++.||+|+||.||+|.+..+++.||+|.+.+.. ........+..|+.+++.++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 357999999999999999999999999999999986532 23334456778999999999999999999987653
Q ss_pred -eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcccc
Q 042772 380 -HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458 (489)
Q Consensus 380 -~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~ 458 (489)
..++||||+ +++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~ 168 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQT 168 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence 469999999 7899988865 34899999999999999999999999999999999999999999999999998643
Q ss_pred CC------------CCc-------eeecccccchHHHHHHHHhCCcccC
Q 042772 459 SC------------KPQ-------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 ~~------------~~~-------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.. .|+ ....+|+|++|++++++++|..||.
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~ 217 (343)
T cd07880 169 DSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFK 217 (343)
T ss_pred ccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 31 122 1234589999999999999999984
No 321
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.92 E-value=1.3e-24 Score=215.61 Aligned_cols=172 Identities=19% Similarity=0.198 Sum_probs=139.4
Q ss_pred ccCCCCceEEEEEEEcCC------------------------CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCc
Q 042772 313 PLGCGDTGSVHLVELQGA------------------------GELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFL 368 (489)
Q Consensus 313 ~LG~G~fG~Vy~a~~~~t------------------------g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnI 368 (489)
.||+|+||.||+|....+ ...|++|.+... .......+..|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS---HRDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH---HHHHHHHHHHHHHHHhcCCCCCe
Confidence 589999999999985322 236888888643 23344567788999999999999
Q ss_pred ceeeEEEEeCCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---
Q 042772 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG--- 445 (489)
Q Consensus 369 v~l~~~~~~~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g--- 445 (489)
+++++++......++||||+++|+|..++.... ..+++..+..++.|++.||.|||++||+||||||+|||+++.+
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 999999999999999999999999999987543 3478999999999999999999999999999999999998654
Q ss_pred ----cEEEEecCCccccC-----------CCCc-------eeecccccchHHHHHHH-HhCCcccC
Q 042772 446 ----HVVLTDFDLSFMTS-----------CKPQ-------VFYHAHVNGFYFIMYKW-LTGYFTYV 488 (489)
Q Consensus 446 ----~vKL~DFGlS~~~~-----------~~~~-------~~~~~~v~s~g~~a~e~-~~G~lpY~ 488 (489)
.+|++|||++.... ..|+ ....+|+|++|++++++ ..|..||.
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~ 223 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLK 223 (274)
T ss_pred CccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCcc
Confidence 48999999875321 1122 12345899999999998 46888874
No 322
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.92 E-value=3.5e-24 Score=207.30 Aligned_cols=179 Identities=27% Similarity=0.389 Sum_probs=157.0
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++.+.||+|++|.||++....+++.|++|.+..... .......+..|+++++.++|||++++++++......+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-KEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 48889999999999999999999999999999976543 23456788999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC-----
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK----- 461 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~----- 461 (489)
|+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 157 (254)
T cd06627 80 YAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDA 157 (254)
T ss_pred cCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccccc
Confidence 99999999999875 45899999999999999999999999999999999999999999999999988643321
Q ss_pred ----------Cce------eecccccchHHHHHHHHhCCcccC
Q 042772 462 ----------PQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 ----------~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+. ....|+|++|.+++++++|..||.
T Consensus 158 ~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~ 200 (254)
T cd06627 158 SVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYY 200 (254)
T ss_pred ccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence 111 134689999999999999999874
No 323
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.92 E-value=2e-24 Score=212.82 Aligned_cols=175 Identities=17% Similarity=0.231 Sum_probs=141.0
Q ss_pred cccCCCCceEEEEEEEcCC--CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCC
Q 042772 312 KPLGCGDTGSVHLVELQGA--GELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCP 389 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~t--g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ 389 (489)
+.||+|+||.||++..... ...+++|.+.... .......+.+|+.+++.++||||+++++.+......|+||||++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 3699999999999986533 2356667665432 23345678889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--------
Q 042772 390 GGELFALLDKQP--MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-------- 459 (489)
Q Consensus 390 ggsL~~~L~~~~--~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-------- 459 (489)
+|+|.+++.+.. ...+++..+..++.||+.||.|||+++++||||||+|||++.++.++|+|||++....
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 999999997642 2335677788999999999999999999999999999999999999999999875210
Q ss_pred ---------CCCcee-------------ecccccchHHHHHHHHh-CCcccC
Q 042772 460 ---------CKPQVF-------------YHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 460 ---------~~~~~~-------------~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
.+|+.. ...|+|++|++++++++ |..||.
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~ 210 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYS 210 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCC
Confidence 113221 24689999999999985 567774
No 324
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.92 E-value=9e-25 Score=219.31 Aligned_cols=176 Identities=25% Similarity=0.383 Sum_probs=150.5
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
.|.....||+|+||.||+|.+..+++.||+|.+..... .....+.+|+.+++.++||||+++++++......|++||
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e 98 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLME 98 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEe
Confidence 35556689999999999999998999999999865422 234567789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------- 459 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------- 459 (489)
|+++++|.+++.. ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++....
T Consensus 99 ~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~ 175 (297)
T cd06659 99 FLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 175 (297)
T ss_pred cCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccccccccc
Confidence 9999999998765 347899999999999999999999999999999999999999999999999875321
Q ss_pred --------CCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 --------CKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --------~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 218 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYF 218 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 11111 234599999999999999999984
No 325
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.92 E-value=2.7e-24 Score=213.51 Aligned_cols=179 Identities=26% Similarity=0.396 Sum_probs=156.3
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
...|+..+.||+|++|.||+|.+..++..+++|.+..... ....+..|+++++.++||||+++++++......|++
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 3469999999999999999999998899999999975422 456678899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC---- 460 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~---- 460 (489)
+||+++++|.+++.... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 172 (286)
T cd06614 94 MEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK 172 (286)
T ss_pred EeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhh
Confidence 99999999999998864 3589999999999999999999999999999999999999999999999998753221
Q ss_pred -----------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 -----------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -----------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. -...|+|++|++++++++|..||.
T Consensus 173 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~ 217 (286)
T cd06614 173 RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYL 217 (286)
T ss_pred hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCC
Confidence 1111 234699999999999999999985
No 326
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.92 E-value=7.3e-25 Score=236.54 Aligned_cols=182 Identities=22% Similarity=0.301 Sum_probs=140.0
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCC-cEEEEEE--------------eecccccchHHHHHHHHHHHHHHhCCCCCc
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAG-ELYAMKA--------------MEKSVMLNRNKVHRACIEREIMSLLDHPFL 368 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg-~~vAiK~--------------i~~~~~~~~~~~~~~~~E~~il~~l~HpnI 368 (489)
..++|++++.||+|+||+||+|..+... ...+.|. +.+...........+.+|+.+++.++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 3578999999999999999999865432 2222221 111111222345567889999999999999
Q ss_pred ceeeEEEEeCCeEEEEEecCCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC
Q 042772 369 PTLYASFQTSTHICLITDFCPGGELFALLDKQP---MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG 445 (489)
Q Consensus 369 v~l~~~~~~~~~~~lVmEy~~ggsL~~~L~~~~---~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g 445 (489)
+++++++......|++|+++ +++|..++.... ........+..++.||+.||.|||++||+||||||+|||++.++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~ 304 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDG 304 (501)
T ss_pred CcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence 99999999999999999999 568888875432 11234667888999999999999999999999999999999999
Q ss_pred cEEEEecCCccccCC----------------CCce------eecccccchHHHHHHHHhCCcc
Q 042772 446 HVVLTDFDLSFMTSC----------------KPQV------FYHAHVNGFYFIMYKWLTGYFT 486 (489)
Q Consensus 446 ~vKL~DFGlS~~~~~----------------~~~~------~~~~~v~s~g~~a~e~~~G~lp 486 (489)
.+||+|||++..... .|+. ....|+|++|++++|+++|..+
T Consensus 305 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~ 367 (501)
T PHA03210 305 KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFC 367 (501)
T ss_pred CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 999999999964321 1222 1335899999999999988754
No 327
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.92 E-value=7.5e-25 Score=223.52 Aligned_cols=177 Identities=18% Similarity=0.356 Sum_probs=149.4
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC-----Ce
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS-----TH 380 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-----~~ 380 (489)
++|++.+.||+|+||.||+|.+..+|+.||+|.++.. ........+..|+.+++.++||||+++++++... ..
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF--EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc--ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 5799999999999999999999999999999998642 2233456677899999999999999999877544 35
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC 460 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~ 460 (489)
+|++|||++ ++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 83 ~~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 158 (336)
T cd07849 83 VYIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADP 158 (336)
T ss_pred EEEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccc
Confidence 899999995 589888865 3489999999999999999999999999999999999999999999999999854321
Q ss_pred ------------------CCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ------------------KPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ------------------~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~ 211 (336)
T cd07849 159 EHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFP 211 (336)
T ss_pred cccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 1221 123589999999999999999884
No 328
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.92 E-value=9.4e-25 Score=214.17 Aligned_cols=175 Identities=24% Similarity=0.296 Sum_probs=145.2
Q ss_pred cccCCCCceEEEEEEEcCCC------cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 312 KPLGCGDTGSVHLVELQGAG------ELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg------~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
+.||+|+||.||+|..+... +.+|+|.+.+.. .......+.+|+.+++.++||||+++++++......+++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 36899999999999986544 789999886432 2234567888999999999999999999999989999999
Q ss_pred ecCCCCCHHHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-----cEEEEecCCc
Q 042772 386 DFCPGGELFALLDKQ-----PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG-----HVVLTDFDLS 455 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~-----~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g-----~vKL~DFGlS 455 (489)
||+++++|.+++... ....+++..+..++.|++.||.|||+++++|+||||+||+++.++ .++|+|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 999999999999753 123378899999999999999999999999999999999999887 8999999998
Q ss_pred cccCC-----------------CCc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 456 FMTSC-----------------KPQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 456 ~~~~~-----------------~~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
..... +|+ ....+|+|++|+++++|++ |..||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~ 215 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYP 215 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCc
Confidence 53210 111 1234599999999999997 999884
No 329
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.92 E-value=7.4e-25 Score=214.57 Aligned_cols=172 Identities=19% Similarity=0.235 Sum_probs=142.1
Q ss_pred cccCCCCceEEEEEEEcCCCc-------EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 312 KPLGCGDTGSVHLVELQGAGE-------LYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~-------~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
+.||+|+||.||+|....++. .+|+|.+... .....+.+..|..+++.++||||+++++++......++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 469999999999999865543 4888877543 234456778899999999999999999999998899999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc--------EEEEecCCcc
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGH--------VVLTDFDLSF 456 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~--------vKL~DFGlS~ 456 (489)
|||+++|+|.+++..+.. .+++..+..++.||+.||.|||++||+||||||+||+++.++. ++++|||++.
T Consensus 78 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 78 QEYVKFGSLDTYLKKNKN-LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EecCCCCcHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999999999987533 4789999999999999999999999999999999999987764 6999999985
Q ss_pred ccC-----------CCCce-------eecccccchHHHHHHHHhCC-ccc
Q 042772 457 MTS-----------CKPQV-------FYHAHVNGFYFIMYKWLTGY-FTY 487 (489)
Q Consensus 457 ~~~-----------~~~~~-------~~~~~v~s~g~~a~e~~~G~-lpY 487 (489)
... .+|+. ...+|+|++|++++++++|. .||
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~ 206 (258)
T cd05078 157 TVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPL 206 (258)
T ss_pred ccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCCh
Confidence 322 12322 22459999999999999984 554
No 330
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.92 E-value=1.4e-24 Score=217.05 Aligned_cols=181 Identities=25% Similarity=0.305 Sum_probs=149.9
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC-----
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST----- 379 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~----- 379 (489)
.++|++.+.||+|+||.||+|....+++.||+|.+..... .......+.+|+.+++.++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 4579999999999999999999999999999998864322 1222334567999999999999999999886643
Q ss_pred ---eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcc
Q 042772 380 ---HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSF 456 (489)
Q Consensus 380 ---~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~ 456 (489)
..++||||+. ++|.+++.... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 4599999995 58988887643 348999999999999999999999999999999999999999999999999885
Q ss_pred ccC-------------------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 457 MTS-------------------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 457 ~~~-------------------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
... .+|+. ...+|+|++|++++++++|..||.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~ 225 (310)
T cd07865 168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQ 225 (310)
T ss_pred cccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCC
Confidence 331 11221 124689999999999999998874
No 331
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.92 E-value=2.7e-24 Score=208.09 Aligned_cols=173 Identities=47% Similarity=0.773 Sum_probs=152.5
Q ss_pred cCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCCCH
Q 042772 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGEL 393 (489)
Q Consensus 314 LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ggsL 393 (489)
||.|+||.||++.+..+++.+|+|.+.+...........+..|+.+++.++||||+++++.+......|++|||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 68999999999999989999999999876555555677888999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-------------
Q 042772 394 FALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------------- 460 (489)
Q Consensus 394 ~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------------- 460 (489)
.+++.... .+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 158 (250)
T cd05123 81 FSHLSKEG--RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPE 158 (250)
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCcc
Confidence 99998753 489999999999999999999999999999999999999999999999999864322
Q ss_pred --CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 --KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 --~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ....|+|++|.+++++++|..||.
T Consensus 159 ~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~ 194 (250)
T cd05123 159 YLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFY 194 (250)
T ss_pred ccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 1111 124688999999999999999985
No 332
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.92 E-value=2.9e-24 Score=209.89 Aligned_cols=173 Identities=20% Similarity=0.228 Sum_probs=140.0
Q ss_pred cccCCCCceEEEEEEEcC---CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEE-eCCeEEEEEec
Q 042772 312 KPLGCGDTGSVHLVELQG---AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQ-TSTHICLITDF 387 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~---tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-~~~~~~lVmEy 387 (489)
+.||+|+||.||+|.+.. ....+|+|.+... ........+..|+.+++.++||||+++++++. .+...+++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 468999999999998753 3467999987532 23445677888999999999999999999765 45568999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-------
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------- 460 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------- 460 (489)
+++|+|.+++..... .+++..+..++.|++.||.|||+.+++||||||+|||++.++.+||+|||+++....
T Consensus 79 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 79 MKHGDLRNFIRSETH-NPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred CCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence 999999999976532 357778888999999999999999999999999999999999999999999863211
Q ss_pred ------------CCce------eecccccchHHHHHHHHhC-Cccc
Q 042772 461 ------------KPQV------FYHAHVNGFYFIMYKWLTG-YFTY 487 (489)
Q Consensus 461 ------------~~~~------~~~~~v~s~g~~a~e~~~G-~lpY 487 (489)
+|+. ...+|+|++|++++++++| ..||
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~ 203 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 203 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCC
Confidence 1111 1235899999999999985 5555
No 333
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.92 E-value=1.2e-24 Score=222.19 Aligned_cols=179 Identities=23% Similarity=0.395 Sum_probs=152.0
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC-----Ce
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS-----TH 380 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-----~~ 380 (489)
.+|.+.+.||.|+||.||+|.+..+++.||+|.+..... .......+..|+.+++.++||||+++++++... ..
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 469999999999999999999999999999999875432 233455677899999999999999999987644 35
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC 460 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~ 460 (489)
+|++|||+. ++|.+++... ..+++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||++.....
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 160 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 160 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence 899999994 7999998765 4489999999999999999999999999999999999999999999999999864321
Q ss_pred C---------------Cc-------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 K---------------PQ-------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ~---------------~~-------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
. |+ ....+|+|++|++++++++|..||.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 210 (337)
T cd07858 161 KGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFP 210 (337)
T ss_pred CcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCC
Confidence 1 11 1234699999999999999999884
No 334
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.92 E-value=5.9e-24 Score=214.98 Aligned_cols=179 Identities=25% Similarity=0.324 Sum_probs=153.7
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEec
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDF 387 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy 387 (489)
|...+.||+|+||.||+|.+..+++.|++|.+.............+..|+.+++.++|||++++++++.+....|+||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 67778899999999999999999999999999765444445556788899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--------
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-------- 459 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-------- 459 (489)
+. |+|.+++.... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++....
T Consensus 103 ~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~ 180 (313)
T cd06633 103 CL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGT 180 (313)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCcccc
Confidence 95 68888886643 358999999999999999999999999999999999999999999999999875322
Q ss_pred ---CCCcee---------ecccccchHHHHHHHHhCCcccC
Q 042772 460 ---CKPQVF---------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---~~~~~~---------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+.. ..+|+|++|++++++++|..||.
T Consensus 181 ~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~ 221 (313)
T cd06633 181 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 221 (313)
T ss_pred ccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 123222 23599999999999999999874
No 335
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.92 E-value=1.9e-24 Score=213.18 Aligned_cols=178 Identities=26% Similarity=0.377 Sum_probs=152.6
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC--CeEEEEE
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS--THICLIT 385 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~~lVm 385 (489)
|++.+.||.|+||.||+|....+++.+|+|.+.... ........+..|+++++.+.|||++++++++... ...++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 678899999999999999999999999999998653 2233445677899999999999999999999888 8999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
||++ ++|.+++.... ..+++..+..++.|++.||.|||++|++|+||||+||++++++.++|+|||++.....
T Consensus 80 e~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (287)
T cd07840 80 EYMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD 157 (287)
T ss_pred cccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence 9996 59999887653 3589999999999999999999999999999999999999999999999998864321
Q ss_pred -----------CCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 461 -----------KPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -----------~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ....|+|++|++++++++|..||.
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~ 203 (287)
T cd07840 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQ 203 (287)
T ss_pred ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCC
Confidence 1221 123588999999999999999985
No 336
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.92 E-value=2.9e-24 Score=212.19 Aligned_cols=173 Identities=26% Similarity=0.363 Sum_probs=143.8
Q ss_pred cCccccccc--CCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeEE
Q 042772 306 HHFKPIKPL--GCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 306 ~~y~~~~~L--G~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ 382 (489)
+.|.+.+.+ |+|+||.||++..+.++..+|+|.+....... .|......+ +||||++++++|...+..|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 356666666 99999999999999999999999987542211 122222222 7999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEEecCCccccCC-
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG-HVVLTDFDLSFMTSC- 460 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g-~vKL~DFGlS~~~~~- 460 (489)
+||||+++++|.+++.... .+++..+..++.|++.||.|||+.|++||||||+||+++.++ .++|+|||++.....
T Consensus 86 iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 163 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP 163 (267)
T ss_pred EEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC
Confidence 9999999999999998763 589999999999999999999999999999999999999998 999999998864321
Q ss_pred ----------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 ----------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ----------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ....|+|++|.+++++++|..||.
T Consensus 164 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~ 207 (267)
T PHA03390 164 SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFK 207 (267)
T ss_pred ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 1222 233599999999999999999984
No 337
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.92 E-value=2.5e-24 Score=208.87 Aligned_cols=181 Identities=26% Similarity=0.406 Sum_probs=156.2
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
+|++.+.||.|+||.||++.++.+++.+|+|.+...... ......+..|+.+++.++||||+++++++......++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 488899999999999999999999999999999765432 3445677889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC---
Q 042772 387 FCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK--- 461 (489)
Q Consensus 387 y~~ggsL~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~--- 461 (489)
|+++++|.+++.+. ....+++..+..++.|++.||.|||+.|++|+||+|.||+++.++.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~ 159 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK 159 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcc
Confidence 99999999998762 2245889999999999999999999999999999999999999999999999988644311
Q ss_pred ----------Cc------eeecccccchHHHHHHHHhCCcccC
Q 042772 462 ----------PQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 ----------~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+ ....+|+|++|.+++++++|..||.
T Consensus 160 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~ 202 (256)
T cd08530 160 TQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFE 202 (256)
T ss_pred cccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 11 1134689999999999999999985
No 338
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=6.1e-26 Score=237.33 Aligned_cols=147 Identities=31% Similarity=0.491 Sum_probs=135.6
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
+.|.++..||.|+||+||+|..+.++...|.|++... ....+..+.-|++||..++||+||++++.|..++.+||+.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 4588899999999999999999999999999988643 4567888999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcc
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSF 456 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~ 456 (489)
|||.||.....+-.-. .+|.+.++..+++|++.||.|||++.|||||||..|||+.-+|.|+|+|||.|.
T Consensus 109 EFC~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSA 178 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSA 178 (1187)
T ss_pred eecCCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccc
Confidence 9999999998887653 569999999999999999999999999999999999999999999999999984
No 339
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.92 E-value=1.6e-24 Score=241.42 Aligned_cols=153 Identities=39% Similarity=0.669 Sum_probs=140.6
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
+++|++++.||.|+||.||+|.+..+++.||+|++.+...........+..|+.++..++||||+++++++....++|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 46799999999999999999999999999999999876555566677888999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
|||+.+++|.+++... ..+++..++.++.||+.||.|||.++|+||||||+|||++.++.+||+|||+++...
T Consensus 83 mEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~ 155 (669)
T cd05610 83 MEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTL 155 (669)
T ss_pred EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCcccc
Confidence 9999999999999765 348899999999999999999999999999999999999999999999999997543
No 340
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.92 E-value=6.2e-26 Score=221.66 Aligned_cols=184 Identities=23% Similarity=0.370 Sum_probs=152.7
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCC----cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe-C
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAG----ELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT-S 378 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg----~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~ 378 (489)
.+..|+.+..||+|+||.||+|..+.+. +.+|||.++.... ........++|+.+++.++||||+.+..+|.. +
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd-~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD-GTGISMSACREIALLRELKHPNVISLVKVFLSHD 100 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC-CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence 3567999999999999999999665443 3789998865422 12234567899999999999999999998877 7
Q ss_pred CeEEEEEecCCCCCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC----CcEEEEe
Q 042772 379 THICLITDFCPGGELFALLDKQ---PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD----GHVVLTD 451 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~---~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~----g~vKL~D 451 (489)
..+++++||.+. +|.+.++.. ..+.++...+..++.||+.|+.|||++-|+||||||.|||+..+ |.|||+|
T Consensus 101 ~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 101 KKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred ceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeec
Confidence 889999999965 999998753 22458999999999999999999999999999999999999877 8999999
Q ss_pred cCCccccCCC--CceeecccccchHHHHHHHHhCCcccCC
Q 042772 452 FDLSFMTSCK--PQVFYHAHVNGFYFIMYKWLTGYFTYVP 489 (489)
Q Consensus 452 FGlS~~~~~~--~~~~~~~~v~s~g~~a~e~~~G~lpY~~ 489 (489)
||+++....+ |-+.....|.++.|.+||+++|.-.|+|
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~ 219 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTK 219 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccc
Confidence 9999987654 3333445678888999999999888874
No 341
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.92 E-value=1.9e-24 Score=213.77 Aligned_cols=179 Identities=21% Similarity=0.363 Sum_probs=153.6
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEec
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDF 387 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy 387 (489)
|++.+.||.|++|.||+|.++.+|..||+|.+..... .......+.+|+++++.++|||++++++++......|++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 6788999999999999999999999999999875432 222335677899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--------
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-------- 459 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-------- 459 (489)
++ ++|.+++.......+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++....
T Consensus 80 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 158 (283)
T cd07835 80 LD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH 158 (283)
T ss_pred cC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence 94 699999987654468999999999999999999999999999999999999999999999999985321
Q ss_pred -------CCCcee-------ecccccchHHHHHHHHhCCcccC
Q 042772 460 -------CKPQVF-------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 -------~~~~~~-------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+.. ..+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 201 (283)
T cd07835 159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFP 201 (283)
T ss_pred cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 123322 23588999999999999999884
No 342
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.92 E-value=5.1e-24 Score=212.26 Aligned_cols=176 Identities=24% Similarity=0.402 Sum_probs=151.3
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
.|...+.||+|++|.||++.+..+++.+++|.+... .......+.+|+.+++.++||||+++++++......++++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 455667999999999999999989999999988543 22334567889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------ 460 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------ 460 (489)
|+++++|.+++.. ..+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++.....
T Consensus 97 ~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~ 173 (285)
T cd06648 97 FLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRK 173 (285)
T ss_pred ccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccc
Confidence 9999999999876 3478999999999999999999999999999999999999999999999998753221
Q ss_pred ---------CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 ---------KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---------~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ ....+|+|++|++++++++|..||.
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~ 216 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYF 216 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCc
Confidence 111 1234699999999999999999974
No 343
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.92 E-value=1.1e-24 Score=222.14 Aligned_cols=179 Identities=21% Similarity=0.347 Sum_probs=151.9
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe----CCeE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT----STHI 381 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~----~~~~ 381 (489)
.+|++.+.||.|+||.||+|..+.+++.||+|.+..... .......+..|+.+++.++||||+++++++.. ...+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 579999999999999999999999999999999875432 23345677789999999999999999988763 3578
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC--
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-- 459 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-- 459 (489)
++||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++++++.+||+|||++....
T Consensus 84 ~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred EEEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 99999995 6999998764 348999999999999999999999999999999999999999999999999985321
Q ss_pred -----------------CCCc-------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 -----------------CKPQ-------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 -----------------~~~~-------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+ ....+|+|++|++++++++|..||.
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~ 213 (334)
T cd07855 161 PTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFP 213 (334)
T ss_pred CcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccC
Confidence 0122 2234689999999999999999984
No 344
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.92 E-value=4.1e-24 Score=210.82 Aligned_cols=176 Identities=21% Similarity=0.330 Sum_probs=147.0
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeC--CeEEEE
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTS--THICLI 384 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~--~~~~lV 384 (489)
|++++.||+|+||.||+|.+..+++.||+|.+++... .... .....|+.++.++. ||||+++++++.+. +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 6788999999999999999999999999999865432 2222 23346888888885 99999999999887 889999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS----- 459 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~----- 459 (489)
|||++ ++|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+||+++. +.+||+|||++....
T Consensus 79 ~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~ 155 (282)
T cd07831 79 FELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPY 155 (282)
T ss_pred EecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCCc
Confidence 99996 58888887643 35899999999999999999999999999999999999999 999999999986431
Q ss_pred ---------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ---------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~ 200 (282)
T cd07831 156 TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFP 200 (282)
T ss_pred CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCC
Confidence 11221 234689999999999999999884
No 345
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.92 E-value=2.1e-24 Score=215.55 Aligned_cols=182 Identities=24% Similarity=0.316 Sum_probs=152.0
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC----
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST---- 379 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~---- 379 (489)
..++|++.+.||.|+||.||+|.++.+++.||+|.++.... .......+..|+.+++.++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45689999999999999999999999999999999875432 1222345667999999999999999999887654
Q ss_pred ------eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecC
Q 042772 380 ------HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFD 453 (489)
Q Consensus 380 ------~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFG 453 (489)
.++++|||+++ +|.+++.... ..+++..+..++.|++.||.|||+.||+|+||||+||++++++.+||+|||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg 161 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL-VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFG 161 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccc
Confidence 79999999965 8888877642 358999999999999999999999999999999999999999999999999
Q ss_pred CccccC----------------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 454 LSFMTS----------------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 454 lS~~~~----------------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
++.... .+|+. ...+|+|++|++++++++|..||.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~ 219 (302)
T cd07864 162 LARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQ 219 (302)
T ss_pred ccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 886421 11221 134589999999999999998884
No 346
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.92 E-value=3.3e-24 Score=220.00 Aligned_cols=178 Identities=25% Similarity=0.402 Sum_probs=150.2
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC------C
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------T 379 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~------~ 379 (489)
++|.+.+.||+|+||.||+|.+..+++.||+|.+.+... .......+.+|+.+++.++||||+++++++... .
T Consensus 17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (345)
T cd07877 17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 95 (345)
T ss_pred CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccc
Confidence 679999999999999999999999999999999875422 233345677899999999999999999988643 3
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
..|++++++ +++|.+++... .+++..+..++.|++.||.|||++||+||||||+||++++++.+||+|||++....
T Consensus 96 ~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~ 171 (345)
T cd07877 96 DVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 171 (345)
T ss_pred cEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccc
Confidence 478899887 78998888653 38999999999999999999999999999999999999999999999999986432
Q ss_pred C------------CCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 460 C------------KPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ~------------~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
. +|+. ....|+|++|++++++++|..||.
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~ 219 (345)
T cd07877 172 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 219 (345)
T ss_pred ccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 1 1221 124699999999999999999984
No 347
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.92 E-value=3.7e-24 Score=215.34 Aligned_cols=170 Identities=22% Similarity=0.286 Sum_probs=144.3
Q ss_pred CceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCCCHHHHH
Q 042772 318 DTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALL 397 (489)
Q Consensus 318 ~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ggsL~~~L 397 (489)
++|.||.+....+++.||+|.+..... .......+..|+.+++.++||||+++++++......+++|||+++|+|.+++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence 445666666677899999999976422 3456678999999999999999999999999999999999999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------------------
Q 042772 398 DKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------------------ 459 (489)
Q Consensus 398 ~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------------------ 459 (489)
.......+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||.+....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
T cd08216 91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVK 170 (314)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccc
Confidence 87544558999999999999999999999999999999999999999999999999874221
Q ss_pred ----CCCc--------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 ----CKPQ--------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----~~~~--------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+ ....+|+|++|++++++++|..||.
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~ 211 (314)
T cd08216 171 NLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFK 211 (314)
T ss_pred cccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence 1122 1234699999999999999999985
No 348
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.2e-25 Score=235.20 Aligned_cols=173 Identities=25% Similarity=0.342 Sum_probs=150.3
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGG 391 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~gg 391 (489)
-+||.|.||+||-|++..|....|||.+... +...++-+..|+.+-+.|+|.|||+++|++...+++-|.||-+|||
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 4699999999999999999999999999643 4456778888999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe-cCCcEEEEecCCccccC---------
Q 042772 392 ELFALLDKQPMKIF--REDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQ-KDGHVVLTDFDLSFMTS--------- 459 (489)
Q Consensus 392 sL~~~L~~~~~~~l--~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld-~~g~vKL~DFGlS~~~~--------- 459 (489)
+|.++|... .+++ .|.+..++..||+.||.|||.+.|||||||-+|||++ -.|.+||+|||.|+.+.
T Consensus 658 SLSsLLrsk-WGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETF 736 (1226)
T KOG4279|consen 658 SLSSLLRSK-WGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETF 736 (1226)
T ss_pred cHHHHHHhc-cCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCcccccc
Confidence 999999875 3456 7899999999999999999999999999999999997 57899999999986332
Q ss_pred ------CCC--------ceeecccccchHHHHHHHHhCCcccC
Q 042772 460 ------CKP--------QVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ------~~~--------~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+| -+-.++|+|++|+++-||++|..||.
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ 779 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFV 779 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCee
Confidence 111 12245688999999999999999884
No 349
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.92 E-value=4.3e-24 Score=209.71 Aligned_cols=182 Identities=26% Similarity=0.381 Sum_probs=151.3
Q ss_pred CcccccccCCCCceEEEEEEEcC-CCcEEEEEEeecccc-------cchHHHHHHHHHHHHHHh-CCCCCcceeeEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQG-AGELYAMKAMEKSVM-------LNRNKVHRACIEREIMSL-LDHPFLPTLYASFQT 377 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~-tg~~vAiK~i~~~~~-------~~~~~~~~~~~E~~il~~-l~HpnIv~l~~~~~~ 377 (489)
.|++.+.||+|+||.||+|.+.. +++.+|+|.+..... ........+..|+.++.. ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48889999999999999999987 788999998864321 123345667788888865 799999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecCC
Q 042772 378 STHICLITDFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDL 454 (489)
Q Consensus 378 ~~~~~lVmEy~~ggsL~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH~-~gIvHrDLKP~NILld~~g~vKL~DFGl 454 (489)
....+++|||+++++|.+++... ....+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||+
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 99999999999999999988542 23458999999999999999999996 7899999999999999999999999999
Q ss_pred ccccCCC--------------Cce------eecccccchHHHHHHHHhCCcccC
Q 042772 455 SFMTSCK--------------PQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 455 S~~~~~~--------------~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+...... |+. -..+|+|++|++++++++|..||.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~ 214 (269)
T cd08528 161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFY 214 (269)
T ss_pred eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccc
Confidence 8643311 111 123589999999999999999984
No 350
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.92 E-value=3.3e-24 Score=213.09 Aligned_cols=180 Identities=41% Similarity=0.637 Sum_probs=151.8
Q ss_pred CcccccccCCCCceEEEEEEEc---CCCcEEEEEEeeccccc-chHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQ---GAGELYAMKAMEKSVML-NRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~---~tg~~vAiK~i~~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~ 381 (489)
+|++.+.||+|+||.||++... .++..||+|.+.+.... .......+..|+.++..+ +||||+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4788999999999999999864 45789999998754322 223445678899999999 599999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC- 460 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~- 460 (489)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 9999999999999998764 3488999999999999999999999999999999999999999999999998754211
Q ss_pred ---------------CCc--------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 ---------------KPQ--------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---------------~~~--------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.|+ .....|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~ 209 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFT 209 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcc
Confidence 111 1234589999999999999999983
No 351
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.92 E-value=6e-24 Score=208.89 Aligned_cols=180 Identities=25% Similarity=0.324 Sum_probs=146.2
Q ss_pred cccccccCCCCceEEEEEEEc---CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC-----
Q 042772 308 FKPIKPLGCGDTGSVHLVELQ---GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST----- 379 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~---~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~----- 379 (489)
|++.+.||+|+||.||+|.+. .+++.||+|.+..... .....+.+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF-SSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC-ChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 677889999999999999865 3578999999965432 3345667888999999999999999999876532
Q ss_pred -eEEEEEecCCCCCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCC
Q 042772 380 -HICLITDFCPGGELFALLDKQ----PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454 (489)
Q Consensus 380 -~~~lVmEy~~ggsL~~~L~~~----~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGl 454 (489)
..+++++|+++|+|.+++... ....++...+..++.|++.||.|||+.||+||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence 347899999999999887532 112478899999999999999999999999999999999999999999999999
Q ss_pred ccccCCC-----------------Cc------eeecccccchHHHHHHHHh-CCcccC
Q 042772 455 SFMTSCK-----------------PQ------VFYHAHVNGFYFIMYKWLT-GYFTYV 488 (489)
Q Consensus 455 S~~~~~~-----------------~~------~~~~~~v~s~g~~a~e~~~-G~lpY~ 488 (489)
++..... |+ ....+|+|++|++++++++ |..||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~ 217 (273)
T cd05074 160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYA 217 (273)
T ss_pred cccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCC
Confidence 8743210 11 1224689999999999988 777763
No 352
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.92 E-value=7.3e-24 Score=209.30 Aligned_cols=179 Identities=22% Similarity=0.342 Sum_probs=148.6
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC---CCCCcceeeEEEEeCCe----
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL---DHPFLPTLYASFQTSTH---- 380 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l---~HpnIv~l~~~~~~~~~---- 380 (489)
|++.+.||+|+||.||+|.++.+++.||+|.+..... .......+..|+.+++++ +||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 6788999999999999999998899999999975432 222234455677777665 69999999999988776
Q ss_pred -EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 381 -ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 381 -~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
++++|||++ ++|.+++.......+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.+||+|||++....
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 999999996 589999987654458999999999999999999999999999999999999999999999999986532
Q ss_pred C--------------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 460 C--------------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ~--------------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
. +|+. ...+|+|++|++++++++|..||.
T Consensus 159 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~ 207 (287)
T cd07838 159 FEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFR 207 (287)
T ss_pred CCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCccc
Confidence 1 1111 224689999999999999988873
No 353
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.92 E-value=4.2e-24 Score=213.60 Aligned_cols=186 Identities=25% Similarity=0.381 Sum_probs=153.7
Q ss_pred CCccccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEe
Q 042772 299 SGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQT 377 (489)
Q Consensus 299 ~~~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~ 377 (489)
....+..++|++.+.||+|+||.||+|.+..+++.||+|.+++... ......+..|+.++.++ .||||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~ 85 (296)
T cd06618 8 QKYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGYFIT 85 (296)
T ss_pred eeccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhheeeec
Confidence 3345667889999999999999999999999999999999975432 22345566677766666 59999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecCCcc
Q 042772 378 STHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDLSF 456 (489)
Q Consensus 378 ~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~-~gIvHrDLKP~NILld~~g~vKL~DFGlS~ 456 (489)
....|++|||+ +++|.+++.... ..+++..+..++.|++.||.|||+ .||+||||+|+||++++++.+||+|||++.
T Consensus 86 ~~~~~~v~e~~-~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~ 163 (296)
T cd06618 86 DSDVFICMELM-STCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISG 163 (296)
T ss_pred CCeEEEEeecc-CcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccch
Confidence 99999999998 458887776643 358999999999999999999997 599999999999999999999999999985
Q ss_pred ccC--------------CCCce----------eecccccchHHHHHHHHhCCcccC
Q 042772 457 MTS--------------CKPQV----------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 457 ~~~--------------~~~~~----------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
... .+|+. ...+|+|++|++++++++|..||.
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 219 (296)
T cd06618 164 RLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYK 219 (296)
T ss_pred hccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCC
Confidence 322 11221 234689999999999999999985
No 354
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.92 E-value=5.7e-24 Score=213.16 Aligned_cols=175 Identities=25% Similarity=0.404 Sum_probs=149.8
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEec
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDF 387 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy 387 (489)
|.....||+|+||.||++..+.+++.||+|.+... .......+.+|+.+++.++||||+++++.+......+++|||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence 44457899999999999999999999999987533 233456688899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-------
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------- 460 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------- 460 (489)
+++++|.+++... .+++..+..++.|++.||.|||++|++|+||+|+||++++++.++|+|||++.....
T Consensus 99 ~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~ 175 (292)
T cd06657 99 LEGGALTDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 175 (292)
T ss_pred CCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccc
Confidence 9999999987653 378999999999999999999999999999999999999999999999998753321
Q ss_pred --------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 --------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 --------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ....|+|++|++++++++|..||.
T Consensus 176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~ 217 (292)
T cd06657 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF 217 (292)
T ss_pred cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 1111 124589999999999999999984
No 355
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.92 E-value=3.8e-24 Score=217.86 Aligned_cols=180 Identities=22% Similarity=0.289 Sum_probs=150.2
Q ss_pred cCccc-ccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchH-----------HHHHHHHHHHHHHhCCCCCcceeeE
Q 042772 306 HHFKP-IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-----------KVHRACIEREIMSLLDHPFLPTLYA 373 (489)
Q Consensus 306 ~~y~~-~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~-----------~~~~~~~E~~il~~l~HpnIv~l~~ 373 (489)
++|.. .+.||.|+||.||+|.++.+++.||+|.+......... ....+..|+++++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 35654 57799999999999999999999999998654322100 0124678999999999999999999
Q ss_pred EEEeCCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecC
Q 042772 374 SFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFD 453 (489)
Q Consensus 374 ~~~~~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFG 453 (489)
++......+++|||+. |+|.+++... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcc
Confidence 9999999999999996 6999999765 348999999999999999999999999999999999999999999999999
Q ss_pred CccccC-----------------------------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 454 LSFMTS-----------------------------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 454 lS~~~~-----------------------------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
++.... .+|+. ....|+|++|++++++++|..||.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~ 235 (335)
T PTZ00024 165 LARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFP 235 (335)
T ss_pred ceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 886433 11221 223588999999999999999874
No 356
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.92 E-value=8.6e-24 Score=213.12 Aligned_cols=181 Identities=23% Similarity=0.288 Sum_probs=154.1
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
..|...+.||.|+||.||+|.++.+++.+|+|.+.............+..|+.+++.++|||++++++++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34888899999999999999999999999999987543334445567788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
||+. |+|.+++.... ..+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||++.....
T Consensus 95 e~~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 172 (308)
T cd06634 95 EYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV 172 (308)
T ss_pred EccC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCccccc
Confidence 9996 68888776543 3488999999999999999999999999999999999999999999999998864221
Q ss_pred ------CCc---------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 ------KPQ---------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ------~~~---------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ ....+|+|++|++++++++|..||.
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 215 (308)
T cd06634 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215 (308)
T ss_pred CCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCc
Confidence 122 1224699999999999999999874
No 357
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.92 E-value=4.6e-24 Score=217.60 Aligned_cols=179 Identities=26% Similarity=0.382 Sum_probs=151.1
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeC--CeE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTS--THI 381 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~--~~~ 381 (489)
.++|++.+.||+|+||.||+|.+..+++.+|+|.+.+... .......+..|+.+++++ +||||+++++++... ...
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4679999999999999999999998999999998865322 233445677899999999 999999999988653 468
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC- 460 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~- 460 (489)
|+||||++ ++|.+++... .+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||++.....
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~ 160 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSEL 160 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccc
Confidence 99999996 5999988764 478899999999999999999999999999999999999999999999998863321
Q ss_pred -------------------CCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 461 -------------------KPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -------------------~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ...+|+|++|++++++++|..||.
T Consensus 161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~ 214 (337)
T cd07852 161 EENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFP 214 (337)
T ss_pred cccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCC
Confidence 1221 134689999999999999999884
No 358
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.91 E-value=2.5e-24 Score=218.36 Aligned_cols=178 Identities=21% Similarity=0.357 Sum_probs=153.1
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC-----eE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST-----HI 381 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~-----~~ 381 (489)
+|++.+.||.|+||.||+|....+++.||+|.+.... ......+.+..|+.+++.++||||+++++++.... .+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 5889999999999999999999999999999987542 22344567888999999999999999999987765 79
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK 461 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~ 461 (489)
|++|||++ ++|.+++.... .+++..+..++.|++.||.|||++||+|+||||.|||++.++.++|+|||++......
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 80 YIVTELME-TDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEEecchh-hhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 99999996 58999987653 5899999999999999999999999999999999999999999999999998644321
Q ss_pred ------------------Cc-------eeecccccchHHHHHHHHhCCcccC
Q 042772 462 ------------------PQ-------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 ------------------~~-------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+ ....+|+|++|++++++++|..||.
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~ 208 (330)
T cd07834 157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFP 208 (330)
T ss_pred ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcC
Confidence 21 1224589999999999999999884
No 359
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.91 E-value=5.6e-25 Score=231.70 Aligned_cols=179 Identities=24% Similarity=0.331 Sum_probs=152.4
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeeccc-ccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCe--EEEE
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSV-MLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTH--ICLI 384 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~--~~lV 384 (489)
.+....||+|+|-+||+|.+..+|..||--.++-.. ......++++..|+.+|+.|+||||+++|++|.+... +.+|
T Consensus 42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~i 121 (632)
T KOG0584|consen 42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFI 121 (632)
T ss_pred eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeee
Confidence 445678999999999999999999999866554332 2356668999999999999999999999999987755 8899
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEec-CCcEEEEecCCccccC--
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG--IIYRDLKPENILLQK-DGHVVLTDFDLSFMTS-- 459 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~g--IvHrDLKP~NILld~-~g~vKL~DFGlS~~~~-- 459 (489)
+|.+..|+|..|+++... .+...+..|+.||+.||.|||++. |+|||||.+||||+. .|.|||+|+|||++..
T Consensus 122 TEL~TSGtLr~Y~kk~~~--vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 122 TELFTSGTLREYRKKHRR--VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred eecccCCcHHHHHHHhcc--CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 999999999999998743 789999999999999999999985 999999999999974 5899999999996432
Q ss_pred ------CCCceee----------cccccchHHHHHHHHhCCcccC
Q 042772 460 ------CKPQVFY----------HAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ------~~~~~~~----------~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+.|+.+. ..||++||-++-||++|.+||.
T Consensus 200 ~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYs 244 (632)
T KOG0584|consen 200 HAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYS 244 (632)
T ss_pred ccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChh
Confidence 2233332 2289999999999999999995
No 360
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.91 E-value=5.5e-24 Score=210.26 Aligned_cols=178 Identities=28% Similarity=0.394 Sum_probs=151.3
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCCeEEEEEe
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lVmE 386 (489)
|++.+.||+|++|.||+|....+++.|++|.+...... .......+|+..++.+. ||||+++++++......++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 67889999999999999999999999999998654321 12233456888999998 9999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC------
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------ 460 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------ 460 (489)
|+ +|+|.+++.......+++..+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++.....
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 157 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTD 157 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCC
Confidence 99 88999999876544589999999999999999999999999999999999999999999999999864321
Q ss_pred --------CCcee-------ecccccchHHHHHHHHhCCcccC
Q 042772 461 --------KPQVF-------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 --------~~~~~-------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+.. ..+|+|++|.+++++++|..||.
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~ 200 (283)
T cd07830 158 YVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFP 200 (283)
T ss_pred CCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccC
Confidence 22222 24589999999999999998874
No 361
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.91 E-value=6.5e-24 Score=216.50 Aligned_cols=179 Identities=23% Similarity=0.404 Sum_probs=151.5
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe-CCeEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT-STHICL 383 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~~l 383 (489)
.++|++.+.||.|+||.||+|.+..+++.||+|.+.+... .......+..|+++++.++||||++++++|.. ....++
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 4579999999999999999999999999999998865432 23345667789999999999999999999875 457899
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC----
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS---- 459 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~---- 459 (489)
+|||+ +++|.+++... .+++..+..++.|++.||.|||++|++|+||+|+||++++++.++|+|||++....
T Consensus 88 v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 163 (328)
T cd07856 88 VTELL-GTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMT 163 (328)
T ss_pred Eeehh-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcC
Confidence 99999 67999888653 37888899999999999999999999999999999999999999999999886332
Q ss_pred --------CCCcee-------ecccccchHHHHHHHHhCCcccC
Q 042772 460 --------CKPQVF-------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 --------~~~~~~-------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+.. ..+|+|++|++++++++|..||.
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~ 207 (328)
T cd07856 164 GYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFP 207 (328)
T ss_pred CCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 123322 23588999999999999998873
No 362
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.91 E-value=7.3e-24 Score=212.43 Aligned_cols=181 Identities=17% Similarity=0.173 Sum_probs=136.3
Q ss_pred ccCcccccccCCCCceEEEEEEEcCC---CcEEEEEEeecccccchHH--------HHHHHHHHHHHHhCCCCCcceeeE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGA---GELYAMKAMEKSVMLNRNK--------VHRACIEREIMSLLDHPFLPTLYA 373 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~t---g~~vAiK~i~~~~~~~~~~--------~~~~~~E~~il~~l~HpnIv~l~~ 373 (489)
-++|++.+.||+|+||.||+|.+..+ +..+|+|............ ......+...+..++|+|++.+++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 35799999999999999999999877 6677877643221110000 011122333455678999999998
Q ss_pred EEEeCC----eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEE
Q 042772 374 SFQTST----HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVL 449 (489)
Q Consensus 374 ~~~~~~----~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL 449 (489)
++.... ..+++|+++ ..++.+.+... ...++..+..++.|++.||.|||+++|+||||||+|||++.++.++|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l 167 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKL-VENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYI 167 (294)
T ss_pred eeeEecCCceEEEEEEehh-ccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEE
Confidence 765543 457888988 45777777654 23578889999999999999999999999999999999999999999
Q ss_pred EecCCccccC-----------------C-----CC------ceeecccccchHHHHHHHHhCCcccC
Q 042772 450 TDFDLSFMTS-----------------C-----KP------QVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 450 ~DFGlS~~~~-----------------~-----~~------~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|||+|+... . +| ......|+|++|+++++|++|..||.
T Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~ 234 (294)
T PHA02882 168 IDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWK 234 (294)
T ss_pred EEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999986431 0 00 11224489999999999999999994
No 363
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.91 E-value=5.8e-25 Score=229.68 Aligned_cols=186 Identities=22% Similarity=0.265 Sum_probs=163.2
Q ss_pred CCccccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC
Q 042772 299 SGEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS 378 (489)
Q Consensus 299 ~~~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 378 (489)
+.+++...+......||-|.||.||.|.++.-.-.||+|.++.. .-.++.|..|..+|+-+.|||+|+++++|..+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED----tMeveEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc----chhHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 44555666778889999999999999999998899999999754 44678999999999999999999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcccc
Q 042772 379 THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~ 458 (489)
..+|||+|||..|+|.+||.+.....++.-..+.++.||..||+||..+++|||||..+|+|+.++..||++|||+|++.
T Consensus 336 pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 336 PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence 99999999999999999999987777888888999999999999999999999999999999999999999999999865
Q ss_pred CCC----------Ccee------------ecccccchHHHHHHHH-hCCcccC
Q 042772 459 SCK----------PQVF------------YHAHVNGFYFIMYKWL-TGYFTYV 488 (489)
Q Consensus 459 ~~~----------~~~~------------~~~~v~s~g~~a~e~~-~G~lpY~ 488 (489)
... |.-| ..+|||.||+.++|++ .|.-||.
T Consensus 416 tgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYP 468 (1157)
T KOG4278|consen 416 TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYP 468 (1157)
T ss_pred cCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCC
Confidence 532 1111 3458899999999986 6888885
No 364
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.91 E-value=8.6e-26 Score=252.14 Aligned_cols=180 Identities=27% Similarity=0.424 Sum_probs=156.2
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
-+++-...||.|.||.||-|....+|...|+|.+.-... .......+.+|..++..++|||+|++|++-.+...++|.|
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~-~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDS-DHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCcc-ccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 357777889999999999999999999999998865433 2555677888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC----- 460 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~----- 460 (489)
|||.+|+|.+++... ...++.....+..|++.|+.|||+.|||||||||+|||++.+|.+|++|||.|.....
T Consensus 1314 EyC~~GsLa~ll~~g--ri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~ 1391 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHG--RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTM 1391 (1509)
T ss_pred HHhccCcHHHHHHhc--chhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcC
Confidence 999999999999875 3478899999999999999999999999999999999999999999999999964321
Q ss_pred --------------CCcee---------ecccccchHHHHHHHHhCCcccC
Q 042772 461 --------------KPQVF---------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 --------------~~~~~---------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+.+ ..+|+|++|+..-||++|..||.
T Consensus 1392 ~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~ 1442 (1509)
T KOG4645|consen 1392 PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWA 1442 (1509)
T ss_pred CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchh
Confidence 12222 34488999999999999999985
No 365
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.91 E-value=5.8e-24 Score=209.57 Aligned_cols=178 Identities=24% Similarity=0.385 Sum_probs=152.1
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEec
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDF 387 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy 387 (489)
|++.+.||+|++|.||+|....+++.+++|.++.... .......+..|+.+++.++||||+++++++......+++|||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 5678899999999999999998999999999875532 223456777899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC------
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK------ 461 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~------ 461 (489)
++ ++|.+++.... ..+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||.+......
T Consensus 80 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 157 (283)
T cd05118 80 MD-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH 157 (283)
T ss_pred cC-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccC
Confidence 96 49998887743 45899999999999999999999999999999999999999999999999987533211
Q ss_pred ---------Cc-------eeecccccchHHHHHHHHhCCcccC
Q 042772 462 ---------PQ-------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 ---------~~-------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+ ....+|+|++|++++++++|..||.
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~ 200 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFP 200 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 11 1234589999999999999998884
No 366
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.91 E-value=5.2e-24 Score=213.03 Aligned_cols=181 Identities=22% Similarity=0.306 Sum_probs=149.4
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC------
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------ 378 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~------ 378 (489)
.++|++.+.||.|+||.||+|.++.+++.+|+|.+......+ .....+.+|+++++.++||||+++++.+...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 568999999999999999999999999999999986543222 1223456799999999999999999887543
Q ss_pred --CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcc
Q 042772 379 --THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSF 456 (489)
Q Consensus 379 --~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~ 456 (489)
..+++||||+. ++|...+.... ..+++..+..++.|++.||.|||++|++|+||||+||++++++.++|+|||++.
T Consensus 86 ~~~~~~lv~~~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 86 KRGSVYMVTPYMD-HDLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred cCceEEEEEecCC-cCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccch
Confidence 35799999995 57887776542 358999999999999999999999999999999999999999999999999986
Q ss_pred ccCC--------------------------CCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 457 MTSC--------------------------KPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 457 ~~~~--------------------------~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.... +|+. ....|+|++|++++++++|..||.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~ 228 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQ 228 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCC
Confidence 4321 1221 123589999999999999998874
No 367
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.91 E-value=8.4e-25 Score=231.35 Aligned_cols=184 Identities=23% Similarity=0.293 Sum_probs=159.0
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCC---CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGA---GELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS 378 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~t---g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 378 (489)
.|..++.++.+.||+|+||.|+.|.|... ...||+|.+....... ....|++|+.+|.+|+|||+++|||...+
T Consensus 106 lIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~- 182 (1039)
T KOG0199|consen 106 LIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD- 182 (1039)
T ss_pred eccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-
Confidence 45566788899999999999999998742 3478999997665432 67899999999999999999999999887
Q ss_pred CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcccc
Q 042772 379 THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~ 458 (489)
..+.+|||+++.|+|.+.|.+.....|.-.....++.||+.||.||.++++|||||..+|+|+...-.|||+|||+.+.+
T Consensus 183 qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaL 262 (1039)
T KOG0199|consen 183 QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRAL 262 (1039)
T ss_pred chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceecc
Confidence 56899999999999999999865667889999999999999999999999999999999999999999999999999865
Q ss_pred C------------------CCCcee------ecccccchHHHHHHHH-hCCcccC
Q 042772 459 S------------------CKPQVF------YHAHVNGFYFIMYKWL-TGYFTYV 488 (489)
Q Consensus 459 ~------------------~~~~~~------~~~~v~s~g~~a~e~~-~G~lpY~ 488 (489)
. |.|+.+ ..+|+|.||++++||. .|..||.
T Consensus 263 g~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~ 317 (1039)
T KOG0199|consen 263 GENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWV 317 (1039)
T ss_pred CCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCC
Confidence 5 233322 3559999999999995 7888884
No 368
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.91 E-value=3.3e-24 Score=224.49 Aligned_cols=183 Identities=21% Similarity=0.271 Sum_probs=154.3
Q ss_pred cccccCcccccccCCCCceEEEEEEEcCC----CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQGA----GELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT 377 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~~t----g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 377 (489)
.+......+.+.||.|.||-||.|.+... .--||+|..+... ..+..+.|..|..+|+.++||||++++|.+..
T Consensus 385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfdHphIikLIGv~~e 462 (974)
T KOG4257|consen 385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE 462 (974)
T ss_pred eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence 44445567778899999999999987532 3478899887643 34457889999999999999999999999976
Q ss_pred CCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccc
Q 042772 378 STHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFM 457 (489)
Q Consensus 378 ~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~ 457 (489)
. ..|||||.++-|.|..||..+.. .++......++.||+.||.|||+..+|||||..+|||+.+..-|||+|||+|+-
T Consensus 463 ~-P~WivmEL~~~GELr~yLq~nk~-sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~ 540 (974)
T KOG4257|consen 463 Q-PMWIVMELAPLGELREYLQQNKD-SLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRY 540 (974)
T ss_pred c-ceeEEEecccchhHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhh
Confidence 5 59999999999999999998754 489999999999999999999999999999999999999999999999999985
Q ss_pred cCCC----------------Cce------eecccccchHHHHHHH-HhCCcccC
Q 042772 458 TSCK----------------PQV------FYHAHVNGFYFIMYKW-LTGYFTYV 488 (489)
Q Consensus 458 ~~~~----------------~~~------~~~~~v~s~g~~a~e~-~~G~lpY~ 488 (489)
.... |+. ...+|||.||++++|+ ++|.-||-
T Consensus 541 ~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfq 594 (974)
T KOG4257|consen 541 LEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQ 594 (974)
T ss_pred ccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccc
Confidence 5421 111 2456999999999997 59999983
No 369
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.91 E-value=7.9e-24 Score=208.52 Aligned_cols=178 Identities=26% Similarity=0.400 Sum_probs=152.1
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEec
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDF 387 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy 387 (489)
|+..+.||+|++|.||+|....+++.||+|.+.... ........+..|+.+++.++||||+++++++......++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 567788999999999999999999999999997653 1233345677899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC-------
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC------- 460 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~------- 460 (489)
++ ++|.+++.... ..+++..+..++.|++.||.|||++||+|+||+|+||++++++.++|+|||++.....
T Consensus 80 ~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (282)
T cd07829 80 CD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTH 157 (282)
T ss_pred cC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCc
Confidence 97 59999998753 3489999999999999999999999999999999999999999999999998863321
Q ss_pred --------CCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 461 --------KPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 --------~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ....|+|++|++++++++|..||.
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~ 200 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFP 200 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 1221 123589999999999999998874
No 370
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.91 E-value=8.1e-24 Score=216.74 Aligned_cols=176 Identities=24% Similarity=0.426 Sum_probs=147.8
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC-------
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------- 378 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~------- 378 (489)
.+|++.+.||.|+||.||+|.+..+++.||+|.+.... ....+.+.+|+++++.++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~---~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC---CchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 57999999999999999999999999999999986543 23456677899999999999999999776543
Q ss_pred -------CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe-cCCcEEEE
Q 042772 379 -------THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQ-KDGHVVLT 450 (489)
Q Consensus 379 -------~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld-~~g~vKL~ 450 (489)
...|+||||++ ++|.+++... .+++..++.++.||+.||.|||++|++||||||+||+++ +++.+||+
T Consensus 82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 82 VGSLTELNSVYIVQEYME-TDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred cccccccceEEEEeeccc-ccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEEC
Confidence 35899999996 5999888653 488999999999999999999999999999999999997 45678999
Q ss_pred ecCCccccC------------------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 451 DFDLSFMTS------------------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 451 DFGlS~~~~------------------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|||++.... .+|+. ...+|+|++|++++++++|..||.
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~ 220 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFA 220 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCC
Confidence 999985321 11221 124689999999999999999984
No 371
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.91 E-value=7.8e-24 Score=216.93 Aligned_cols=179 Identities=25% Similarity=0.421 Sum_probs=152.3
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCe----
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTH---- 380 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~---- 380 (489)
.++|++.+.||+|+||.||+|.+..+++.||+|.+.... ........+..|+.+++.++||||+++++++.....
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 357999999999999999999999999999999886542 223345667789999999999999999988766544
Q ss_pred --EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcccc
Q 042772 381 --ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458 (489)
Q Consensus 381 --~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~ 458 (489)
.++|+||+ +++|.+++.. ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccc
Confidence 89999999 6799999876 34899999999999999999999999999999999999999999999999998643
Q ss_pred CC------------CCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 459 SC------------KPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 ~~------------~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.. +|+. ...+|+|++|++++++++|..||.
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~ 217 (343)
T cd07851 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFP 217 (343)
T ss_pred cccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 21 1211 134699999999999999999984
No 372
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.91 E-value=1.9e-23 Score=212.83 Aligned_cols=178 Identities=21% Similarity=0.312 Sum_probs=146.7
Q ss_pred CcccccccCCCCceEEEEEEEcCC--CcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEe----CC
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGA--GELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQT----ST 379 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~t--g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~----~~ 379 (489)
+|++.+.||+|+||.||++.+..+ +..||+|.+.... ......+.+..|+.+++.+ +||||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 488899999999999999999988 8999999986432 2233356677899999998 59999999987543 24
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
.++++|+|+. ++|.+++... ..+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++....
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 6889999984 6999998764 448999999999999999999999999999999999999999999999999986321
Q ss_pred -------------------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 460 -------------------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 -------------------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 157 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~ 211 (332)
T cd07857 157 ENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFK 211 (332)
T ss_pred cccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCC
Confidence 11221 123488999999999999998874
No 373
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.91 E-value=6e-25 Score=210.98 Aligned_cols=181 Identities=24% Similarity=0.373 Sum_probs=148.0
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHh-CCCCCcceeeEEEEeCCeEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL-LDHPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~l~~~~~~~~~~~l 383 (489)
.++.+-+..||.|+||+|++..++.+|+..|+|.+.... .....++++.|.+...+ -+.||||++||+...++..|+
T Consensus 63 ~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n--~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWi 140 (361)
T KOG1006|consen 63 SDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN--IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWI 140 (361)
T ss_pred cchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeecc--chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceee
Confidence 456677889999999999999999999999999997653 34556778888887554 579999999999999999999
Q ss_pred EEecCCCCCHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 384 ITDFCPGGELFALLDK---QPMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~---~~~~~l~e~~~~~i~~qI~~aL~yLH~-~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
.||.| ..+|..+-+. -....++|..+..+....+.||.||-. ..|+|||+||+|||++..|.|||||||++-.+.
T Consensus 141 CMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 141 CMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV 219 (361)
T ss_pred eHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHH
Confidence 99999 5677655432 233458999999999999999999985 589999999999999999999999999974211
Q ss_pred ----------C----CCcee--------ecccccchHHHHHHHHhCCcccC
Q 042772 460 ----------C----KPQVF--------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----------~----~~~~~--------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
| +|+.+ -.+++||+|.+++|.++|..||.
T Consensus 220 ~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr 270 (361)
T KOG1006|consen 220 DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYR 270 (361)
T ss_pred HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcc
Confidence 1 22222 34588999999999999999984
No 374
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=1.3e-23 Score=218.19 Aligned_cols=179 Identities=21% Similarity=0.298 Sum_probs=149.3
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCCeEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~l 383 (489)
-..|++++.||+|+.+.||++...+ .+.||+|.+... ..+...+.-++.|+.+|.+|+ |.+|+.+|++-..++.+|+
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 3579999999999999999998765 455666655332 235667889999999999995 9999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC---
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC--- 460 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~--- 460 (489)
||||= ..+|...|.+.... .+...+++++.||+.|+.++|+.||||.||||.|+|+- .|.+||+|||+|.....
T Consensus 438 vmE~G-d~DL~kiL~k~~~~-~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 438 VMECG-DIDLNKILKKKKSI-DPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred Eeecc-cccHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCcccc
Confidence 99965 67999999886443 45568999999999999999999999999999999984 78999999999853221
Q ss_pred -------------------------------CCceeecccccchHHHHHHHHhCCcccC
Q 042772 461 -------------------------------KPQVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -------------------------------~~~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.-..-.++|+|++|+++|+|+.|..||.
T Consensus 515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~ 573 (677)
T KOG0596|consen 515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFG 573 (677)
T ss_pred ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchH
Confidence 0113356799999999999999999995
No 375
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.90 E-value=1.7e-23 Score=202.85 Aligned_cols=162 Identities=28% Similarity=0.368 Sum_probs=136.1
Q ss_pred CCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCCCHHHH
Q 042772 317 GDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFAL 396 (489)
Q Consensus 317 G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ggsL~~~ 396 (489)
|.+|.||+|.++.+++.||+|.+.+... ...|...+....||||+++++++......+++|||+++|+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE--------YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh--------hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 8999999999999999999999975421 22344445556799999999999999999999999999999999
Q ss_pred HhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------------CCCce
Q 042772 397 LDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------------CKPQV 464 (489)
Q Consensus 397 L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------------~~~~~ 464 (489)
+.... .+++..+..++.|++.||.|||++|++||||||+||+++.++.++++|||++.... ..|+.
T Consensus 76 l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~ 153 (237)
T cd05576 76 ISKFL--NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEV 153 (237)
T ss_pred HHHhc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcc
Confidence 97753 38999999999999999999999999999999999999999999999999764221 12222
Q ss_pred ------eecccccchHHHHHHHHhCCcccC
Q 042772 465 ------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 465 ------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
...+|+|++|++++++++|..|+.
T Consensus 154 ~~~~~~~~~~DvwslG~il~el~~g~~~~~ 183 (237)
T cd05576 154 GGISEETEACDWWSLGAILFELLTGKTLVE 183 (237)
T ss_pred cCCCCCCchhhHHHHHHHHHHHHHCcchhh
Confidence 234699999999999999987653
No 376
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.90 E-value=1.9e-23 Score=213.98 Aligned_cols=177 Identities=25% Similarity=0.405 Sum_probs=148.1
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC------
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST------ 379 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~------ 379 (489)
.+|.+.+.||+|+||.||+|.+..+|+.||+|.+.+... .......+..|+.+++.++||||+++++++....
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 579999999999999999999999999999999865422 2223456778999999999999999999887542
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
..++||||+. .+|..++. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++....
T Consensus 94 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~ 168 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHAD 168 (342)
T ss_pred eEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence 4699999995 47777653 237899999999999999999999999999999999999999999999999986432
Q ss_pred ------------CCCce-------eecccccchHHHHHHHHhCCcccC
Q 042772 460 ------------CKPQV-------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ------------~~~~~-------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+|+. ...+|+|++|++++++++|..||.
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~ 216 (342)
T cd07879 169 AEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFK 216 (342)
T ss_pred CCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCC
Confidence 12222 224689999999999999999984
No 377
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.90 E-value=2.2e-23 Score=203.73 Aligned_cols=181 Identities=26% Similarity=0.404 Sum_probs=148.8
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeeccccc--chHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVML--NRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
+|.+.+.||+|+||.||++.+..++..+++|+++..... .......+..|..+++.++||||+++++++......+++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 588899999999999999999887777777776543221 222344566789999999999999999999988899999
Q ss_pred EecCCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC--
Q 042772 385 TDFCPGGELFALLDK--QPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC-- 460 (489)
Q Consensus 385 mEy~~ggsL~~~L~~--~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~-- 460 (489)
|||+++++|.+++.. .....+++..+..++.|++.||.|||++|++|+||||+||+++. +.++|+|||++.....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 999999999998864 22345899999999999999999999999999999999999975 6799999998864321
Q ss_pred -------------CCce------eecccccchHHHHHHHHhCCcccC
Q 042772 461 -------------KPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 -------------~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+. ....|+|++|.+++++++|..||.
T Consensus 160 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~ 206 (260)
T cd08222 160 DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFE 206 (260)
T ss_pred ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 1111 123689999999999999998875
No 378
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.90 E-value=3.8e-24 Score=238.07 Aligned_cols=178 Identities=25% Similarity=0.374 Sum_probs=143.2
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe-------
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT------- 377 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~------- 377 (489)
..+|+.++.||+|+||.||+++.+-+|+.||||.|.-.. ......++.+|+.+|.+|+|||||++|.+|..
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 567999999999999999999999999999999997543 45566788899999999999999999987700
Q ss_pred --------------------------------------------------------------------------------
Q 042772 378 -------------------------------------------------------------------------------- 377 (489)
Q Consensus 378 -------------------------------------------------------------------------------- 377 (489)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------C--------CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 042772 378 ------------------------S--------THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH 425 (489)
Q Consensus 378 ------------------------~--------~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH 425 (489)
+ ..+||-||||+...|.++++++... -....++.++.||+.||.|+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-SQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHHHH
Confidence 0 2368999999987788887775321 147889999999999999999
Q ss_pred HCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----------------CCCceeecccccchHHHHHHHHhCCc
Q 042772 426 CLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-----------------CKPQVFYHAHVNGFYFIMYKWLTGYF 485 (489)
Q Consensus 426 ~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-----------------~~~~~~~~~~v~s~g~~a~e~~~G~l 485 (489)
++|||||||||.|||+++++.|||+|||+|+... ..+..-....+++.-|.+||++-+..
T Consensus 715 ~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 9999999999999999999999999999997511 11111233355666677777665544
No 379
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=3.2e-23 Score=214.03 Aligned_cols=143 Identities=22% Similarity=0.194 Sum_probs=115.6
Q ss_pred cccCcccccccCCCCceEEEEEEEcC-CCcEEEEEEeecccc--cchHHHHHHHHHHHHHHhCCCCCcce-eeEEEEeCC
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQG-AGELYAMKAMEKSVM--LNRNKVHRACIEREIMSLLDHPFLPT-LYASFQTST 379 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~-tg~~vAiK~i~~~~~--~~~~~~~~~~~E~~il~~l~HpnIv~-l~~~~~~~~ 379 (489)
..++|.+.+.||+|+||+||+|.++. +++.+|+|.+..... ........+.+|+++|+.++|+|++. +++. .
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~ 91 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----G 91 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----C
Confidence 34679999999999999999999876 678889998753311 12334567889999999999999985 5432 4
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC-CCCCEEEecCCcEEEEecCCcccc
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDL-KPENILLQKDGHVVLTDFDLSFMT 458 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDL-KP~NILld~~g~vKL~DFGlS~~~ 458 (489)
..|+||||++|++|.. +. .. . ...++.|++.||.|||++||+|||| ||+|||++.++.+||+|||+|+..
T Consensus 92 ~~~LVmE~~~G~~L~~-~~--~~---~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~ 162 (365)
T PRK09188 92 KDGLVRGWTEGVPLHL-AR--PH---G---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVF 162 (365)
T ss_pred CcEEEEEccCCCCHHH-hC--cc---c---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence 5899999999999963 21 11 1 1457889999999999999999999 999999999999999999999865
Q ss_pred C
Q 042772 459 S 459 (489)
Q Consensus 459 ~ 459 (489)
.
T Consensus 163 ~ 163 (365)
T PRK09188 163 R 163 (365)
T ss_pred c
Confidence 4
No 380
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.89 E-value=1e-23 Score=226.41 Aligned_cols=178 Identities=25% Similarity=0.294 Sum_probs=152.8
Q ss_pred CcccccccCCCCceEEEEEEEcCCCc----EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGE----LYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~----~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 382 (489)
..+..++||+|+||+||+|.+-..|+ +||+|++... ........+..|+-+|..++|||++++++++..+. +.
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~--t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF--TSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeecc--CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 36677899999999999999876665 6788877544 34555678889999999999999999999998776 89
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC-
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK- 461 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~- 461 (489)
||++|+++|+|.++++.+.. .+-....+.|..||+.||.|||.+++|||||..+|||+.+-.++||+|||+|+.+...
T Consensus 774 lvtq~mP~G~LlDyvr~hr~-~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHRD-NIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHHHhcccchHHHHHHHhhc-cccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 99999999999999998754 4778888999999999999999999999999999999999999999999999866522
Q ss_pred ----------------------CceeecccccchHHHHHHHH-hCCcccC
Q 042772 462 ----------------------PQVFYHAHVNGFYFIMYKWL-TGYFTYV 488 (489)
Q Consensus 462 ----------------------~~~~~~~~v~s~g~~a~e~~-~G~lpY~ 488 (489)
+.+...+|||+||++.+|++ +|.-||.
T Consensus 853 ~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~ 902 (1177)
T KOG1025|consen 853 KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYD 902 (1177)
T ss_pred ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccC
Confidence 22234569999999999975 8999986
No 381
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=7.7e-25 Score=210.70 Aligned_cols=178 Identities=23% Similarity=0.395 Sum_probs=142.6
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCC-----e
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTST-----H 380 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~-----~ 380 (489)
.+.+..+.||-|+||.||.+.+..+|+.||+|.+..- ..+-...+++.+|..+|..++|.|++..++..+... .
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv-fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqE 131 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV-FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQE 131 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccchhHhhcchH-HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHH
Confidence 3577789999999999999999999999999988543 233345678889999999999999999998776543 4
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC 460 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~ 460 (489)
+|+++|.+ ..+|...+-.- ..++.+.+..+++||++||.|||+.+|+||||||.|.|+++|..+||||||+++....
T Consensus 132 iYV~TELm-QSDLHKIIVSP--Q~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 132 LYVLTELM-QSDLHKIIVSP--QALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHHH-HhhhhheeccC--CCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccch
Confidence 78889988 55888777553 5589999999999999999999999999999999999999999999999999986653
Q ss_pred CCceeecccccchHHHHHHHHhCCccc
Q 042772 461 KPQVFYHAHVNGFYFIMYKWLTGYFTY 487 (489)
Q Consensus 461 ~~~~~~~~~v~s~g~~a~e~~~G~lpY 487 (489)
.....+.-.|.+-+|.+||++.|...|
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhY 235 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRY 235 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhh
Confidence 333333334445555555555555444
No 382
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.89 E-value=3.4e-23 Score=212.03 Aligned_cols=172 Identities=27% Similarity=0.353 Sum_probs=146.3
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHh--CCCCCcceeeEEEEeCC---
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSL--LDHPFLPTLYASFQTST--- 379 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~--l~HpnIv~l~~~~~~~~--- 379 (489)
+...++.+.||+|.||.||+|.+. ++.||||++.. ...+.+..|..|.+. +.|+||+.+++.-....
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~ 280 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADR 280 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc--CceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccc
Confidence 567888999999999999999987 58999999853 345778889999875 58999999998765444
Q ss_pred -eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH---------CCCeecCCCCCCEEEecCCcEEE
Q 042772 380 -HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC---------LGIIYRDLKPENILLQKDGHVVL 449 (489)
Q Consensus 380 -~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~---------~gIvHrDLKP~NILld~~g~vKL 449 (489)
.++||++|.+.|+|.+||+.+ ++++.....++..|++||+|||+ ..|+|||||.+|||+.+|+++.|
T Consensus 281 ~eywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccI 357 (534)
T KOG3653|consen 281 MEYWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCI 357 (534)
T ss_pred cceeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEe
Confidence 799999999999999999984 47999999999999999999995 36999999999999999999999
Q ss_pred EecCCccccC-CCCceeecccccchHHHHHHHHhCCccc
Q 042772 450 TDFDLSFMTS-CKPQVFYHAHVNGFYFIMYKWLTGYFTY 487 (489)
Q Consensus 450 ~DFGlS~~~~-~~~~~~~~~~v~s~g~~a~e~~~G~lpY 487 (489)
+|||+|.... ..++--....|++..|++||++-|.+=|
T Consensus 358 aDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl 396 (534)
T KOG3653|consen 358 ADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINL 396 (534)
T ss_pred eccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhccc
Confidence 9999997665 2333334457888889999998887643
No 383
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.89 E-value=4e-22 Score=188.78 Aligned_cols=178 Identities=38% Similarity=0.606 Sum_probs=154.3
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEec
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDF 387 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy 387 (489)
|.+.+.||.|++|.||++....+++.+++|.+...... ...+.+..|++.++.++|+|++++++++......++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 56778999999999999999988999999999765322 2567888899999999999999999999988999999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC------
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK------ 461 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~------ 461 (489)
+++++|.+++...... +++..+..++.+++.++.+||+.+++|+||+|.||+++.++.++|+|||++......
T Consensus 79 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (225)
T smart00221 79 CEGGDLFDYLRKKGGK-LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLK 157 (225)
T ss_pred cCCCCHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccc
Confidence 9999999999875321 789999999999999999999999999999999999999999999999988654321
Q ss_pred ----------Ccee-------ecccccchHHHHHHHHhCCcccC
Q 042772 462 ----------PQVF-------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 ----------~~~~-------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+.. ...|+|++|++++++++|..||.
T Consensus 158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 2211 35688999999999999999994
No 384
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.89 E-value=8.1e-23 Score=216.14 Aligned_cols=174 Identities=28% Similarity=0.375 Sum_probs=147.6
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeEEE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~l 383 (489)
...|.+...+|.|+|+.|..+.+..+++.+++|++.+.... ...|+.++... +||||+++.+.+.+..+.|+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~-------~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD-------NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccccc-------cccccchhhhhcCCCcceeecceecCCceeee
Confidence 56799999999999999999999999999999999876221 22366565554 79999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEE-ecCCcEEEEecCCccccC---
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILL-QKDGHVVLTDFDLSFMTS--- 459 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILl-d~~g~vKL~DFGlS~~~~--- 459 (489)
|||.+.|+.|.+.+...+. ....+..|+++|+.|+.|||++|+|||||||+|||+ +..|+++|+|||.++...
T Consensus 394 v~e~l~g~ell~ri~~~~~---~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~ 470 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKPE---FCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSC 470 (612)
T ss_pred eehhccccHHHHHHHhcch---hHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhh
Confidence 9999999999988877533 337788899999999999999999999999999999 699999999999986443
Q ss_pred ---------CCCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 460 ---------CKPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ---------~~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
++|+ +....|.||+|..+|+|++|..||.
T Consensus 471 ~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~ 514 (612)
T KOG0603|consen 471 DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFA 514 (612)
T ss_pred cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccc
Confidence 2222 2244599999999999999999985
No 385
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.88 E-value=4e-23 Score=209.37 Aligned_cols=183 Identities=28% Similarity=0.379 Sum_probs=153.8
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccc----cchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC-
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVM----LNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS- 378 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~----~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~- 378 (489)
..++|-++..||+|+|+.||+|.+....+.||+|+-....- ...+..+..++|..|-+.|+||.||++|++|.-+
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 34679999999999999999999998899999997643221 1344567788999999999999999999999754
Q ss_pred CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--CCeecCCCCCCEEEe---cCCcEEEEecC
Q 042772 379 THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL--GIIYRDLKPENILLQ---KDGHVVLTDFD 453 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~--gIvHrDLKP~NILld---~~g~vKL~DFG 453 (489)
..+|-|+|||+|-+|.-||+.+ +..++.+++.|+.||+.||.||... -|||-||||.|||+- .-|.|||+|||
T Consensus 541 dsFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred ccceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 5789999999999999999987 4489999999999999999999976 599999999999995 34789999999
Q ss_pred CccccC---------------CCCcee-----------------ecccccchHHHHHHHHhCCcccC
Q 042772 454 LSFMTS---------------CKPQVF-----------------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 454 lS~~~~---------------~~~~~~-----------------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|.... .+..+| ...|||+.|++.|.-+.|.-||.
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFG 685 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFG 685 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCC
Confidence 996432 112222 33489999999999999999986
No 386
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.88 E-value=4.3e-23 Score=206.72 Aligned_cols=179 Identities=23% Similarity=0.332 Sum_probs=152.3
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-C-C----CcceeeEEEEeC
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-H-P----FLPTLYASFQTS 378 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-H-p----nIv~l~~~~~~~ 378 (489)
..+|.++..+|+|+||+|-.+.+..++..||+|+++.. ....+....|+.+|.++. + | -++.+.++|...
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 57899999999999999999999999999999998643 334455677999999984 2 3 367888889999
Q ss_pred CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---------------
Q 042772 379 THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQK--------------- 443 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~--------------- 443 (489)
++.|||+|.+ |.+++++|..+...+++..+++.++.|++.++++||+.+++|-||||+|||+-+
T Consensus 164 ghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 164 GHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred CceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccce
Confidence 9999999988 779999999988888999999999999999999999999999999999999842
Q ss_pred -----CCcEEEEecCCccccCCC------------Ccee------ecccccchHHHHHHHHhCCcccC
Q 042772 444 -----DGHVVLTDFDLSFMTSCK------------PQVF------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 444 -----~g~vKL~DFGlS~~~~~~------------~~~~------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+..|+|+|||.|+..... |+++ .+.|+||+|+++.|+.+|..+|-
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFq 310 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQ 310 (415)
T ss_pred eccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecc
Confidence 236899999999754422 2222 45699999999999999998874
No 387
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.88 E-value=2.8e-22 Score=217.46 Aligned_cols=178 Identities=24% Similarity=0.382 Sum_probs=151.6
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEe-----CC
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQT-----ST 379 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~-----~~ 379 (489)
+-|.+.+.||.|.+|.||++..+.+++.+|+|++..... .-..+..|..+++.+ +|||++.+|++|.. .+
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d----~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED----EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc----ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 358999999999999999999999999999999876532 224566788888876 69999999999864 46
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
.+|||||||.||+.-++++.-.+..+.|..+..|++.++.|+.|||...++|||+|=.|||++.+|.|||+|||.|..+.
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQld 174 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 174 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeee
Confidence 89999999999999999998767779999999999999999999999999999999999999999999999999985322
Q ss_pred ---------C-----------------CCceeecccccchHHHHHHHHhCCccc
Q 042772 460 ---------C-----------------KPQVFYHAHVNGFYFIMYKWLTGYFTY 487 (489)
Q Consensus 460 ---------~-----------------~~~~~~~~~v~s~g~~a~e~~~G~lpY 487 (489)
. .+.+-..+|+|++|.++-|+.-|..|+
T Consensus 175 sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl 228 (953)
T KOG0587|consen 175 STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPL 228 (953)
T ss_pred cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCc
Confidence 1 122234558888888888888888775
No 388
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.88 E-value=2.7e-22 Score=189.79 Aligned_cols=143 Identities=20% Similarity=0.177 Sum_probs=111.4
Q ss_pred ccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHH-----------------------HHHHHHHHHHHHhCCCCC
Q 042772 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNK-----------------------VHRACIEREIMSLLDHPF 367 (489)
Q Consensus 311 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~-----------------------~~~~~~E~~il~~l~Hpn 367 (489)
...||+|+||.||+|.+. +|+.||+|+++......... ......|..++..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999987 89999999997653221110 122345889999998887
Q ss_pred cceeeEEEEeCCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeecCCCCCCEEEecCCc
Q 042772 368 LPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYL-HCLGIIYRDLKPENILLQKDGH 446 (489)
Q Consensus 368 Iv~l~~~~~~~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yL-H~~gIvHrDLKP~NILld~~g~ 446 (489)
+......... ..++||||++|+++...+... ..+++..+..++.|++.+|.|+ |+.||+||||||+|||++ ++.
T Consensus 81 v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 81 IPCPEPILLK--SHVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCCcEEEec--CCEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCc
Confidence 7554433222 238999999888776553332 3488999999999999999999 799999999999999998 578
Q ss_pred EEEEecCCccccC
Q 042772 447 VVLTDFDLSFMTS 459 (489)
Q Consensus 447 vKL~DFGlS~~~~ 459 (489)
++|+|||+|....
T Consensus 156 v~LiDFG~a~~~~ 168 (190)
T cd05147 156 LYIIDVSQSVEHD 168 (190)
T ss_pred EEEEEccccccCC
Confidence 9999999997543
No 389
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.88 E-value=4.4e-23 Score=198.66 Aligned_cols=176 Identities=26% Similarity=0.363 Sum_probs=144.7
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeE-EEEeCCeEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYA-SFQTSTHICL 383 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~-~~~~~~~~~l 383 (489)
+.|.+.+.||+|.||.+.+|+++.+...+++|.+.+... ....|.+|..---.| .|.||+.-|+ .|++.+.+++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t----t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF 99 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT----TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF 99 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh----hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence 569999999999999999999999999999999976533 345566665543333 5899997766 5788889999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe--cCCcEEEEecCCccccC--
Q 042772 384 ITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQ--KDGHVVLTDFDLSFMTS-- 459 (489)
Q Consensus 384 VmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld--~~g~vKL~DFGlS~~~~-- 459 (489)
+|||+|.|+|.+-+... .+-|.....++.|++.|+.|||++++||||||.+||||- +...|||||||+++...
T Consensus 100 ~qE~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t 176 (378)
T KOG1345|consen 100 VQEFAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT 176 (378)
T ss_pred eeccCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCce
Confidence 99999999999887653 267889999999999999999999999999999999994 34589999999997433
Q ss_pred ----------CCC-----------ceeecccccchHHHHHHHHhCCcccC
Q 042772 460 ----------CKP-----------QVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ----------~~~-----------~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+.| ......|+|.+|.+.+..++|++||-
T Consensus 177 V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQ 226 (378)
T KOG1345|consen 177 VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQ 226 (378)
T ss_pred ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcch
Confidence 111 11234589999999999999999984
No 390
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=3.9e-24 Score=204.01 Aligned_cols=180 Identities=26% Similarity=0.358 Sum_probs=139.2
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe--------
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT-------- 377 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-------- 377 (489)
+.|.-+..||+|.||.||+|+.+.+|+.||+|.+--... ....-....+|+.+|..+.|+|++.+++.|..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmene-KeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcc-ccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 458888999999999999999999999999886532110 11122345679999999999999999887743
Q ss_pred CCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccc
Q 042772 378 STHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFM 457 (489)
Q Consensus 378 ~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~ 457 (489)
...+|+||.+|+. +|.-+|.... ..++..++..++.++..||.|+|+..|+|||+||+|+||+.+|.+||+|||+++.
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~-vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRK-VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCcc-ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccc
Confidence 2359999999965 9999887643 4489999999999999999999999999999999999999999999999999975
Q ss_pred cCCCCce---eecccccchHHHHHHHHhCCcccC
Q 042772 458 TSCKPQV---FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 458 ~~~~~~~---~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+-.... .+...|.++.|..||+++|.--|+
T Consensus 174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg 207 (376)
T KOG0669|consen 174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYG 207 (376)
T ss_pred eecccccCCCCcccceeeeecCCHHHhhcccccC
Confidence 5421111 123344555555555555555544
No 391
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.87 E-value=1.5e-21 Score=225.97 Aligned_cols=169 Identities=20% Similarity=0.291 Sum_probs=140.9
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
.|...+.||+|+||.||+|.+..++..||+|.+...... ...|++++++++||||+++++++.+....|+|||
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~E 763 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-------PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHE 763 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-------cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEe
Confidence 466677899999999999999989999999988643211 1235788999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCCCCEEEecCCcEEEEecCCcccc-----
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH---CLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT----- 458 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH---~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~----- 458 (489)
|+++|+|.++++. +++..+..++.|++.||+||| +.+|+||||||+||+++.++..++. ||.+...
T Consensus 764 y~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~ 837 (968)
T PLN00113 764 YIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTK 837 (968)
T ss_pred CCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCCC
Confidence 9999999999963 688999999999999999999 6799999999999999988887765 5544211
Q ss_pred ------CCCCce------eecccccchHHHHHHHHhCCcccC
Q 042772 459 ------SCKPQV------FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 ------~~~~~~------~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
..+|+. ...+|+|++|++++|+++|..||.
T Consensus 838 ~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~ 879 (968)
T PLN00113 838 CFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPAD 879 (968)
T ss_pred ccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCC
Confidence 112322 234699999999999999999974
No 392
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.87 E-value=2.4e-21 Score=182.91 Aligned_cols=143 Identities=20% Similarity=0.161 Sum_probs=113.2
Q ss_pred ccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchH-----------------------HHHHHHHHHHHHHhCCCCC
Q 042772 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-----------------------KVHRACIEREIMSLLDHPF 367 (489)
Q Consensus 311 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~-----------------------~~~~~~~E~~il~~l~Hpn 367 (489)
.+.||+|+||+||+|.+. +|+.||+|++++....... ....+..|...+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 568999999999999987 8999999999865321100 0123457889999999998
Q ss_pred cceeeEEEEeCCeEEEEEecCCCCCHHHH-HhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCC
Q 042772 368 LPTLYASFQTSTHICLITDFCPGGELFAL-LDKQPMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDG 445 (489)
Q Consensus 368 Iv~l~~~~~~~~~~~lVmEy~~ggsL~~~-L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~-~gIvHrDLKP~NILld~~g 445 (489)
+.....+.... .++||||++|+++... +.. ..+++..+..++.|++.++.++|+ +||+||||||+||+++ ++
T Consensus 81 i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~ 154 (190)
T cd05145 81 VPVPEPILLKK--NVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCCceEEEecC--CEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CC
Confidence 86554443332 4899999988765443 332 336788999999999999999999 9999999999999999 88
Q ss_pred cEEEEecCCccccCC
Q 042772 446 HVVLTDFDLSFMTSC 460 (489)
Q Consensus 446 ~vKL~DFGlS~~~~~ 460 (489)
.++|+|||+|.....
T Consensus 155 ~~~liDFG~a~~~~~ 169 (190)
T cd05145 155 KPYIIDVSQAVELDH 169 (190)
T ss_pred CEEEEEcccceecCC
Confidence 999999999987653
No 393
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=5.2e-22 Score=202.07 Aligned_cols=143 Identities=27% Similarity=0.374 Sum_probs=123.5
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHH--hCCCCCcceeeEEEEeC----C
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMS--LLDHPFLPTLYASFQTS----T 379 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~--~l~HpnIv~l~~~~~~~----~ 379 (489)
.+.++.+.||+|.||.||+|.++ |+.||+|++... +...+.+|.+|.+ .|+|+||+.++++=..+ .
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR------DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred heeEEEEEecCccccceeecccc--CCceEEEEeccc------chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 46888999999999999999999 789999999543 2345667888876 46999999999875433 3
Q ss_pred eEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-----C---CCeecCCCCCCEEEecCCcEEEEe
Q 042772 380 HICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC-----L---GIIYRDLKPENILLQKDGHVVLTD 451 (489)
Q Consensus 380 ~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~-----~---gIvHrDLKP~NILld~~g~vKL~D 451 (489)
++|||++|.+.|||++||.+ .+++.+....++..++.||+|||. + .|.|||||..|||+.++|.+.|+|
T Consensus 283 QLwLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred EEEEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 79999999999999999988 448899999999999999999994 2 499999999999999999999999
Q ss_pred cCCccccC
Q 042772 452 FDLSFMTS 459 (489)
Q Consensus 452 FGlS~~~~ 459 (489)
+|+|....
T Consensus 360 LGLAv~h~ 367 (513)
T KOG2052|consen 360 LGLAVRHD 367 (513)
T ss_pred ceeeEEec
Confidence 99997554
No 394
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.87 E-value=1.2e-21 Score=214.00 Aligned_cols=178 Identities=17% Similarity=0.173 Sum_probs=126.6
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCC----CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEE----
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGA----GELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYAS---- 374 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~t----g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~---- 374 (489)
...++|.+.+.||+|+||.||+|.+..+ +..||+|.+..... ......+ .+....+.++..+...
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e--~l~~~~~~~~~~~~~~~~~~ 201 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE--RVRRACPNSCADFVYGFLEP 201 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH--HHHhhchhhHHHHHHhhhcc
Confidence 3457899999999999999999999988 89999998754211 1111111 1112222222222211
Q ss_pred --EEeCCeEEEEEecCCCCCHHHHHhhCCCC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 042772 375 --FQTSTHICLITDFCPGGELFALLDKQPMK------------------IFREDSARFYAAEVVIGLEYLHCLGIIYRDL 434 (489)
Q Consensus 375 --~~~~~~~~lVmEy~~ggsL~~~L~~~~~~------------------~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDL 434 (489)
.......++||||+++++|.+++...... ...+..+..++.||+.||.|||+++|+||||
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL 281 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV 281 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence 23456799999999999999998754210 1123456679999999999999999999999
Q ss_pred CCCCEEEec-CCcEEEEecCCccccCC----------------CCcee----------------------------eccc
Q 042772 435 KPENILLQK-DGHVVLTDFDLSFMTSC----------------KPQVF----------------------------YHAH 469 (489)
Q Consensus 435 KP~NILld~-~g~vKL~DFGlS~~~~~----------------~~~~~----------------------------~~~~ 469 (489)
||+|||++. ++.+||+|||+|+.... +|+.+ ...|
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 999999985 68999999999964211 11111 1129
Q ss_pred ccchHHHHHHHHhCCccc
Q 042772 470 VNGFYFIMYKWLTGYFTY 487 (489)
Q Consensus 470 v~s~g~~a~e~~~G~lpY 487 (489)
+|++|++++|+++|.+++
T Consensus 362 VwSlGviL~el~~~~~~~ 379 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRS 379 (566)
T ss_pred cHHHHHHHHHHHhCcCCC
Confidence 999999999999887664
No 395
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.86 E-value=3.9e-21 Score=206.39 Aligned_cols=156 Identities=21% Similarity=0.252 Sum_probs=118.7
Q ss_pred cccccCcccccccCCCCceEEEEEEEc----------------CCCcEEEEEEeecccccchH-----------HHHHHH
Q 042772 302 KIGLHHFKPIKPLGCGDTGSVHLVELQ----------------GAGELYAMKAMEKSVMLNRN-----------KVHRAC 354 (489)
Q Consensus 302 ~i~~~~y~~~~~LG~G~fG~Vy~a~~~----------------~tg~~vAiK~i~~~~~~~~~-----------~~~~~~ 354 (489)
.+..++|.+.+.||+|+||.||+|.+. ..++.||+|.+......... ..+...
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence 456789999999999999999999752 23567999998643211100 112233
Q ss_pred HHHHHHHhCCCCCc-----ceeeEEEEe--------CCeEEEEEecCCCCCHHHHHhhCC--------------------
Q 042772 355 IEREIMSLLDHPFL-----PTLYASFQT--------STHICLITDFCPGGELFALLDKQP-------------------- 401 (489)
Q Consensus 355 ~E~~il~~l~HpnI-----v~l~~~~~~--------~~~~~lVmEy~~ggsL~~~L~~~~-------------------- 401 (489)
.|+.++.++.|.++ +.++++|.. ....++||||+++++|.++++...
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 46667777766544 566666643 346899999999999999987421
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccc
Q 042772 402 --MKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFM 457 (489)
Q Consensus 402 --~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~ 457 (489)
...+++..+..++.|++.+|.|||+++|+||||||+|||++.++.+||+|||++..
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~ 358 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVD 358 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccc
Confidence 11245677888999999999999999999999999999999999999999999853
No 396
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.86 E-value=6.2e-21 Score=181.69 Aligned_cols=167 Identities=40% Similarity=0.631 Sum_probs=145.0
Q ss_pred CceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCCCHHHHH
Q 042772 318 DTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALL 397 (489)
Q Consensus 318 ~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ggsL~~~L 397 (489)
+||.||+|....+++.+|+|.+........ .+.+..|++.++.++|+||+++++++......+++|||+++++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 589999999999999999999976533221 578888999999999999999999999989999999999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC--------------Cc
Q 042772 398 DKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK--------------PQ 463 (489)
Q Consensus 398 ~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~--------------~~ 463 (489)
..... ++...+..++.+++.++.|||+.+++|+||+|.||+++.++.++|+|||.+...... |+
T Consensus 79 ~~~~~--~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE 156 (244)
T smart00220 79 KKRGR--LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPE 156 (244)
T ss_pred HhccC--CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHH
Confidence 87543 789999999999999999999999999999999999999999999999998754321 11
Q ss_pred ------eeecccccchHHHHHHHHhCCcccC
Q 042772 464 ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 464 ------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.....|+|++|.+++++++|..||.
T Consensus 157 ~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~ 187 (244)
T smart00220 157 VLLGKGYGKAVDVWSLGVILYELLTGKPPFP 187 (244)
T ss_pred HHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 1234688999999999999999984
No 397
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.86 E-value=4.7e-22 Score=187.61 Aligned_cols=144 Identities=21% Similarity=0.339 Sum_probs=126.8
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeC--CeE
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTS--THI 381 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~--~~~ 381 (489)
.++|++++.+|+|-|+.|+.|....+.+.++||++++. ..+.+.+|+.||..|. ||||+++++...++ ...
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktp 110 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTP 110 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCc
Confidence 46799999999999999999999888999999999654 3467889999999997 99999999988765 457
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEEecCCccccC
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQK-DGHVVLTDFDLSFMTS 459 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~-~g~vKL~DFGlS~~~~ 459 (489)
.||+||+.+.+...+... ++.-.++.++.|++.||.|+|++||+|||+||.|++||. .-.++|+|+|+|.+..
T Consensus 111 aLiFE~v~n~Dfk~ly~t-----l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 111 SLIFEYVNNTDFKQLYPT-----LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred hhHhhhhccccHHHHhhh-----hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 899999998888776533 788889999999999999999999999999999999984 4579999999997654
No 398
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.86 E-value=4.4e-21 Score=211.43 Aligned_cols=186 Identities=22% Similarity=0.312 Sum_probs=155.6
Q ss_pred ccccccCcccccccCCCCceEEEEEEEcC-------CCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceee
Q 042772 301 EKIGLHHFKPIKPLGCGDTGSVHLVELQG-------AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLY 372 (489)
Q Consensus 301 ~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~-------tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~ 372 (489)
.++...+..+.+.||+|.||+|++|.... ....||+|.++... .....+.+..|+.+|+.+ .||||+.++
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~--~~~~~~~~~~El~~m~~~g~H~niv~ll 368 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENA--SSSEKKDLMSELNVLKELGKHPNIVNLL 368 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEeccccc--CcHHHHHHHHHHHHHHHhcCCcchhhhe
Confidence 34455566777799999999999998652 14589999986553 236678899999999988 599999999
Q ss_pred EEEEeCCeEEEEEecCCCCCHHHHHhhCC------------C--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 042772 373 ASFQTSTHICLITDFCPGGELFALLDKQP------------M--KIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPEN 438 (489)
Q Consensus 373 ~~~~~~~~~~lVmEy~~ggsL~~~L~~~~------------~--~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~N 438 (489)
+++...+.+++|+||+..|+|..+|.... . ..++......++.||+.|++||+++.+|||||..+|
T Consensus 369 G~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRN 448 (609)
T KOG0200|consen 369 GACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARN 448 (609)
T ss_pred eeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhh
Confidence 99999999999999999999999998764 0 137888999999999999999999999999999999
Q ss_pred EEEecCCcEEEEecCCccccCC---------C---C------------ceeecccccchHHHHHHH-HhCCcccC
Q 042772 439 ILLQKDGHVVLTDFDLSFMTSC---------K---P------------QVFYHAHVNGFYFIMYKW-LTGYFTYV 488 (489)
Q Consensus 439 ILld~~g~vKL~DFGlS~~~~~---------~---~------------~~~~~~~v~s~g~~a~e~-~~G~lpY~ 488 (489)
||+.++..+||+|||+|+.... . | .....+|||+||..++|+ .+|..||.
T Consensus 449 VLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp 523 (609)
T KOG0200|consen 449 VLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYP 523 (609)
T ss_pred EEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCC
Confidence 9999999999999999973221 1 1 122345999999999998 59999996
No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.84 E-value=8.1e-20 Score=169.02 Aligned_cols=143 Identities=38% Similarity=0.603 Sum_probs=127.7
Q ss_pred cCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEecCCCCCH
Q 042772 314 LGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGEL 393 (489)
Q Consensus 314 LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ggsL 393 (489)
||+|.+|.||++....+++.+++|.+....... ....+.+|+.+++.+.|++|+++++++......+++|||+++++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 689999999999999889999999987553211 356788899999999999999999999998999999999998999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-CCcEEEEecCCccccC
Q 042772 394 FALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQK-DGHVVLTDFDLSFMTS 459 (489)
Q Consensus 394 ~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~-~g~vKL~DFGlS~~~~ 459 (489)
.+++.... ..++...+..++.+++.++.+||++|++|+||+|.||+++. ++.++|+|||.+....
T Consensus 79 ~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~ 144 (215)
T cd00180 79 KDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLT 144 (215)
T ss_pred HHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEcc
Confidence 99998752 24789999999999999999999999999999999999998 8999999999987543
No 400
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.83 E-value=4e-21 Score=188.92 Aligned_cols=177 Identities=23% Similarity=0.368 Sum_probs=149.3
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeC------
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTS------ 378 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~------ 378 (489)
..+|.-+.++|.|.- .|..|.+.-+++.||+|.+.... .+....++..+|..++..+.|+||++++.+|...
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf-~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPF-QNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCcc-ccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 457899999999998 88889999999999999887653 3455567888999999999999999999999754
Q ss_pred CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcccc
Q 042772 379 THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~ 458 (489)
..+|+|||++ ..+|.+.+... ++-.++..++.|+++|+.|||+.||+||||||+||++..++.+||.|||+|+.-
T Consensus 94 ~e~y~v~e~m-~~nl~~vi~~e----lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 94 QEVYLVMELM-DANLCQVILME----LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred HhHHHHHHhh-hhHHHHHHHHh----cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhccc
Confidence 3589999999 66999988743 678899999999999999999999999999999999999999999999999632
Q ss_pred CC--------------CC------ceeecccccchHHHHHHHHhCCcccC
Q 042772 459 SC--------------KP------QVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 ~~--------------~~------~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.. .| ..-...++|+.|+++-|+++|.+.|.
T Consensus 169 ~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~ 218 (369)
T KOG0665|consen 169 DTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP 218 (369)
T ss_pred CcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec
Confidence 20 11 12234488999999999999988774
No 401
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.83 E-value=1e-19 Score=185.73 Aligned_cols=178 Identities=24% Similarity=0.340 Sum_probs=145.4
Q ss_pred CcccccccCCCCceEEEEEEEcCCC-cEEEEEEeecccccchHHHHHHHHHHHHHHhCCC----CCcceeeEEE-EeCCe
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAG-ELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDH----PFLPTLYASF-QTSTH 380 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg-~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~H----pnIv~l~~~~-~~~~~ 380 (489)
+|.+.+.||+|+||.||+|.+..++ ..+|+|+......... ..+..|..++..+.. +++..+++.. .....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 7999999999999999999988764 6889998765422211 156678888888762 6899999998 47788
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-----CcEEEEecCCc
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD-----GHVVLTDFDLS 455 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~-----g~vKL~DFGlS 455 (489)
.|+||+.+ |.+|.++....+.+.++..++..++.|++.+|++||+.|++||||||.|+++... -.+.|.|||+|
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999988 8899999877776779999999999999999999999999999999999999765 36999999999
Q ss_pred c--ccC-CC--------C--------------------ceeecccccchHHHHHHHHhCCcccC
Q 042772 456 F--MTS-CK--------P--------------------QVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 456 ~--~~~-~~--------~--------------------~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+ ... .. + +.-...|.++++|++.+|..|.+||.
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~ 238 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWE 238 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCc
Confidence 8 311 00 0 00122377889999999999999994
No 402
>PRK10345 hypothetical protein; Provisional
Probab=99.82 E-value=1.4e-19 Score=173.79 Aligned_cols=139 Identities=23% Similarity=0.266 Sum_probs=108.2
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-----CCCCcceeeEEEEeCC---
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-----DHPFLPTLYASFQTST--- 379 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~l~~~~~~~~--- 379 (489)
+.-.+.||+|+||.||. ++.++.. +||++.... ....+.+.+|+.+++.+ +||||+++++++.++.
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g 77 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTG 77 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCe
Confidence 34457899999999995 6666555 688886532 22346788999999999 6799999999998873
Q ss_pred eEE-EEEec--CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHH-HHHHHCCCeecCCCCCCEEEecC----CcEEEEe
Q 042772 380 HIC-LITDF--CPGGELFALLDKQPMKIFREDSARFYAAEVVIGL-EYLHCLGIIYRDLKPENILLQKD----GHVVLTD 451 (489)
Q Consensus 380 ~~~-lVmEy--~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL-~yLH~~gIvHrDLKP~NILld~~----g~vKL~D 451 (489)
.++ +|||| +++|+|.+++.+. .+++. ..++.|++.++ +|||+++|+||||||+|||++.. +.++|+|
T Consensus 78 ~v~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiD 152 (210)
T PRK10345 78 YVYDVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCD 152 (210)
T ss_pred EEEEEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEE
Confidence 444 78999 5579999999763 25555 35577888777 99999999999999999999743 3799999
Q ss_pred -cCCccc
Q 042772 452 -FDLSFM 457 (489)
Q Consensus 452 -FGlS~~ 457 (489)
||.+..
T Consensus 153 g~G~~~~ 159 (210)
T PRK10345 153 NIGESTF 159 (210)
T ss_pred CCCCcce
Confidence 554433
No 403
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.82 E-value=1.1e-20 Score=195.01 Aligned_cols=180 Identities=22% Similarity=0.306 Sum_probs=149.4
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC------CCcceeeEEEEe
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDH------PFLPTLYASFQT 377 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~H------pnIv~l~~~~~~ 377 (489)
.-.+|.+....|+|-|+.|..|.+...|+.||||+|..... ..+.-..|++||++|+. -++++++..|..
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~----M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h 505 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV----MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH 505 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH----HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence 34678888899999999999999999999999999976533 23344569999999852 378999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEEecCCc
Q 042772 378 STHICLITDFCPGGELFALLDKQPM-KIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD-GHVVLTDFDLS 455 (489)
Q Consensus 378 ~~~~~lVmEy~~ggsL~~~L~~~~~-~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~-g~vKL~DFGlS 455 (489)
.+++|||+|.+ ..+|.+.|+.-+. -.|....++.++.|+..||.+|-..||+|.||||.|||+++. ..+||||||.|
T Consensus 506 knHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA 584 (752)
T KOG0670|consen 506 KNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSA 584 (752)
T ss_pred cceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccc
Confidence 99999999998 5699999987532 237889999999999999999999999999999999999865 56899999998
Q ss_pred cccCC-------------CCcee------ecccccchHHHHHHHHhCCcccC
Q 042772 456 FMTSC-------------KPQVF------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 456 ~~~~~-------------~~~~~------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
...+. +|+++ .+-+.|+.|+++||+.+|.++|.
T Consensus 585 ~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFp 636 (752)
T KOG0670|consen 585 SFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFP 636 (752)
T ss_pred cccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecC
Confidence 64431 23222 34488999999999999998885
No 404
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=5.4e-20 Score=178.26 Aligned_cols=143 Identities=19% Similarity=0.195 Sum_probs=117.6
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHH------HHHHHHHHHhCCCCCcceeeEEEEe
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHR------ACIEREIMSLLDHPFLPTLYASFQT 377 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~------~~~E~~il~~l~HpnIv~l~~~~~~ 377 (489)
..++|+.++.||.|+||.||++.. ++..+|+|.+............. +.+|+..+.++.||+|+.+.+++..
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 346899999999999999999765 36689999997665444444444 5688889999999999999988664
Q ss_pred C--------CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEE
Q 042772 378 S--------THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVL 449 (489)
Q Consensus 378 ~--------~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL 449 (489)
. +..+++|||++|.+|.++.. +++. ...+++.+|..+|+.|++|||+||+||+++.+| ++|
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~l 175 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE------ISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRI 175 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh------ccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEE
Confidence 3 35899999999999988732 3332 355899999999999999999999999999988 999
Q ss_pred EecCCccccC
Q 042772 450 TDFDLSFMTS 459 (489)
Q Consensus 450 ~DFGlS~~~~ 459 (489)
+|||.+....
T Consensus 176 iDfg~~~~~~ 185 (232)
T PRK10359 176 IDLSGKRCTA 185 (232)
T ss_pred EECCCccccc
Confidence 9999887554
No 405
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.82 E-value=4.4e-20 Score=175.51 Aligned_cols=179 Identities=20% Similarity=0.264 Sum_probs=146.0
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC-CCcceeeEEEEeCCeE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDH-PFLPTLYASFQTSTHI 381 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~H-pnIv~l~~~~~~~~~~ 381 (489)
+-.+.|++++.||+|+||-+|+|....+|..||||+=+... . -..+..|..+.+.|++ ..|+.+..++....+-
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-~----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~yn 86 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-K----HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYN 86 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-C----CcchhHHHHHHHHhccCCCCchhhhhccccccc
Confidence 34467999999999999999999999999999999764332 1 2346678999999974 7888888888888899
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC---CcEEEEecCCcccc
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD---GHVVLTDFDLSFMT 458 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~---g~vKL~DFGlS~~~ 458 (489)
.+||+.+ |.+|.+++.-.. ..++..+++-.+-|++.-++|+|.++++||||||+|+|+.-+ ..+.|+|||+|...
T Consensus 87 vlVMdLL-GPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 87 VLVMDLL-GPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred eeeeecc-CccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhh
Confidence 9999999 899999987653 348999999999999999999999999999999999999643 46889999999632
Q ss_pred CC----------------------------CCceeecccccchHHHHHHHHhCCcccC
Q 042772 459 SC----------------------------KPQVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 ~~----------------------------~~~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
-. ..+.....|..+.||.+-.+..|.+||-
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQ 222 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQ 222 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccc
Confidence 11 0111233366788999988899999984
No 406
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.81 E-value=3.2e-21 Score=203.88 Aligned_cols=175 Identities=25% Similarity=0.421 Sum_probs=147.7
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++|.++..+|+|+||-||+++++.+++..|+|+++... .....-+..|+-+++-.+||||+.+++.+.....+++.|
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep---~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP---GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccC---CccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 57999999999999999999999999999999997543 334555667888999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC------
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS------ 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~------ 459 (489)
|||.||+|.+.-.- .+++++.++.++..+.+.|++|||++|-+|||||=.|||+++.|.+|++|||.+..+.
T Consensus 92 EycgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Kr 169 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKR 169 (829)
T ss_pred EecCCCcccceeee--cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhh
Confidence 99999999887654 3669999999999999999999999999999999999999999999999999985332
Q ss_pred ---CCCceeecccc------cchHHHHHHHHhCCc
Q 042772 460 ---CKPQVFYHAHV------NGFYFIMYKWLTGYF 485 (489)
Q Consensus 460 ---~~~~~~~~~~v------~s~g~~a~e~~~G~l 485 (489)
....+|+.++| ++|+-..+.|++|..
T Consensus 170 ksfiGtpywmapEvaaverkggynqlcdiwa~git 204 (829)
T KOG0576|consen 170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGIT 204 (829)
T ss_pred hcccCCccccchhHHHHHhcccccccccccccccc
Confidence 23445555544 345556666666643
No 407
>smart00090 RIO RIO-like kinase.
Probab=99.79 E-value=9.8e-19 Score=171.17 Aligned_cols=147 Identities=21% Similarity=0.146 Sum_probs=114.7
Q ss_pred CcccccccCCCCceEEEEEE-EcCCCcEEEEEEeecccccch--------------------H-HHHHHHHHHHHHHhCC
Q 042772 307 HFKPIKPLGCGDTGSVHLVE-LQGAGELYAMKAMEKSVMLNR--------------------N-KVHRACIEREIMSLLD 364 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~-~~~tg~~vAiK~i~~~~~~~~--------------------~-~~~~~~~E~~il~~l~ 364 (489)
.|.+.+.||+|+||.||+|. +..+|+.||+|.+........ . ....+..|..++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48889999999999999998 667899999999975431100 0 1123567999999987
Q ss_pred CC--CcceeeEEEEeCCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCCCCEEE
Q 042772 365 HP--FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG-IIYRDLKPENILL 441 (489)
Q Consensus 365 Hp--nIv~l~~~~~~~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~g-IvHrDLKP~NILl 441 (489)
+. .++.+++. ...++||||++|.+|...+... ..+....+..++.|++.+|.+||++| ++||||||+||++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli 182 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV 182 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE
Confidence 53 34455542 2358999999988887665333 23566677889999999999999999 9999999999999
Q ss_pred ecCCcEEEEecCCccccCC
Q 042772 442 QKDGHVVLTDFDLSFMTSC 460 (489)
Q Consensus 442 d~~g~vKL~DFGlS~~~~~ 460 (489)
+ ++.++|+|||+|.....
T Consensus 183 ~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 183 H-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred E-CCCEEEEEChhhhccCC
Confidence 9 88999999999986554
No 408
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.78 E-value=1.1e-18 Score=172.62 Aligned_cols=176 Identities=22% Similarity=0.306 Sum_probs=145.1
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCCeEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lV 384 (489)
-+|++.+.||+|+||.+++|...-+++.||||.=... ....++..|-...+.|. .++|+..|-+.+...+..||
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 4799999999999999999999989999999965432 12345566888888874 79999999877888899999
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-----CcEEEEecCCccccC
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD-----GHVVLTDFDLSFMTS 459 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~-----g~vKL~DFGlS~~~~ 459 (489)
||.+ |.+|.++++-.+ ..|+..++..++.|++.-++|+|++.+|+|||||+|+||..- ..|.|+|||+|...-
T Consensus 103 idLL-GPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr 180 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR 180 (449)
T ss_pred hhhh-CcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence 9999 899999998875 459999999999999999999999999999999999999643 368999999996432
Q ss_pred CC----------------------------CceeecccccchHHHHHHHHhCCcccC
Q 042772 460 CK----------------------------PQVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 460 ~~----------------------------~~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.+ .+.....|..++|-+.-.++-|.+||-
T Consensus 181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQ 237 (449)
T KOG1165|consen 181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ 237 (449)
T ss_pred CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccc
Confidence 11 111223366778888888999999994
No 409
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=3.4e-18 Score=162.80 Aligned_cols=140 Identities=21% Similarity=0.239 Sum_probs=115.5
Q ss_pred ccccCCCCceEEEEEEEcCCCcEEEEEEeecccccch-----HHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNR-----NKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 311 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~-----~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++.||+|++|.||+|.+ .|..+++|.......... ....++.+|..++..+.|++|+....++......+++|
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence 36799999999999987 467889997654322111 12345778999999999999988777777777899999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
||++|++|.+++... .. ....++.+++.+|.+||+.|++|+|++|.|||++ ++.++|+|||++....
T Consensus 79 e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~ 145 (211)
T PRK14879 79 EYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFSK 145 (211)
T ss_pred EEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccCCC
Confidence 999999999998653 12 7788899999999999999999999999999999 7899999999987543
No 410
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.76 E-value=1.2e-18 Score=188.58 Aligned_cols=167 Identities=25% Similarity=0.322 Sum_probs=130.9
Q ss_pred CcccccccCCCCce-EEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeEEEE
Q 042772 307 HFKPIKPLGCGDTG-SVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 307 ~y~~~~~LG~G~fG-~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lV 384 (489)
-|...+.+|.|+.| .||+|... |+.||+|.+-.. ....+.+|+.+|+.- +|||||++|+.-.++..+||.
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIa 581 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVYE--GREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIA 581 (903)
T ss_pred eeccHHHcccCCCCcEEEEEeeC--CceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEE
Confidence 35666788899886 57889887 789999987433 345667899999988 499999999988899999999
Q ss_pred EecCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec---C--CcEEEEecCCccc
Q 042772 385 TDFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQK---D--GHVVLTDFDLSFM 457 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~---~--g~vKL~DFGlS~~ 457 (489)
.|.| ..+|.++++.. .......-..+..+.|++.||+|||+.+||||||||.||||+. + ..++|+|||+|..
T Consensus 582 lELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 582 LELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred ehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 9999 45999999874 1110111335778899999999999999999999999999976 3 4789999999988
Q ss_pred cCCCCceeec--ccccchHHHHHHHHh
Q 042772 458 TSCKPQVFYH--AHVNGFYFIMYKWLT 482 (489)
Q Consensus 458 ~~~~~~~~~~--~~v~s~g~~a~e~~~ 482 (489)
+......... ...++.|+++||++.
T Consensus 661 l~~~~sS~~r~s~~sGt~GW~APE~L~ 687 (903)
T KOG1027|consen 661 LAGGKSSFSRLSGGSGTSGWQAPEQLR 687 (903)
T ss_pred cCCCcchhhcccCCCCcccccCHHHHh
Confidence 8766555443 345677888877653
No 411
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=1.5e-17 Score=158.59 Aligned_cols=137 Identities=23% Similarity=0.233 Sum_probs=106.9
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccch-HHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCCeEEEEE
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNR-NKVHRACIEREIMSLLD-HPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~-~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lVm 385 (489)
+.+...|++|+||+||++.. .+..++.+.++-.....+ -....+.+|+++|++|. |+++++++++ ...+++|
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm 77 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR 77 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence 45678899999999998775 467777776654322111 12235788999999995 5889999885 3479999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC-CCCCEEEecCCcEEEEecCCccccC
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDL-KPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDL-KP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
||+.|.+|.+.+.. . ...++.|++.+|.++|++||+|||| ||+|||++.+|.++|+|||+|....
T Consensus 78 eyI~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~ 143 (218)
T PRK12274 78 SYLAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGN 143 (218)
T ss_pred eeecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence 99999998754321 1 1346789999999999999999999 7999999999999999999997544
No 412
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.75 E-value=1.3e-17 Score=157.58 Aligned_cols=135 Identities=19% Similarity=0.211 Sum_probs=108.7
Q ss_pred ccCCCCceEEEEEEEcCCCcEEEEEEeecccccc-----hHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEec
Q 042772 313 PLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN-----RNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDF 387 (489)
Q Consensus 313 ~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~-----~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy 387 (489)
.||+|+||.||+|.+ ++..+++|......... .....++.+|..++..+.|+++.....++......+++|||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 389999999999985 46789999865432211 11246677899999999988766655556666778999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
++|++|.+++.... . .++.|++.+|.+||+.|++|+|++|.||+++ ++.++++|||++....
T Consensus 79 ~~g~~l~~~~~~~~-----~----~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~ 140 (199)
T TIGR03724 79 IEGKPLKDVIEEGN-----D----ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSD 140 (199)
T ss_pred ECCccHHHHHhhcH-----H----HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCCC
Confidence 99999999876531 1 6788999999999999999999999999999 8899999999987643
No 413
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=1.3e-17 Score=171.73 Aligned_cols=137 Identities=26% Similarity=0.417 Sum_probs=119.9
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-----CC---CcceeeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-----HP---FLPTLYAS 374 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-----Hp---nIv~l~~~ 374 (489)
+..++|.+.+.||-|.|++||+|.+..+.+.||+|+++.. ....+....|+.+|++++ |+ +||+|++.
T Consensus 75 F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~ 150 (590)
T KOG1290|consen 75 FNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDH 150 (590)
T ss_pred ccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecc
Confidence 3447899999999999999999999999999999998643 445566778999999873 33 69999999
Q ss_pred EEeC----CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecC
Q 042772 375 FQTS----THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKD 444 (489)
Q Consensus 375 ~~~~----~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~-~gIvHrDLKP~NILld~~ 444 (489)
|... .++|+|+|++ |-+|..++.....+.++...+..|+.||+.||.|||. .||||-||||+|||+..+
T Consensus 151 FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 151 FKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST 224 (590)
T ss_pred ceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence 9754 5899999999 7899999999888889999999999999999999995 599999999999999654
No 414
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.74 E-value=1.6e-17 Score=157.55 Aligned_cols=140 Identities=19% Similarity=0.155 Sum_probs=108.6
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccc------hH-------------HHHHHHHHHHHHHhCCCC--
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN------RN-------------KVHRACIEREIMSLLDHP-- 366 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~------~~-------------~~~~~~~E~~il~~l~Hp-- 366 (489)
|.+.+.||+|+||.||++... +|+.||+|++....... .. .......|..++..+.|+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 788899999999999999875 79999999876532100 00 112356688888888777
Q ss_pred CcceeeEEEEeCCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc
Q 042772 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGH 446 (489)
Q Consensus 367 nIv~l~~~~~~~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~ 446 (489)
.++..++ ....+++|||++|++|...... .....++.+++.++.++|+.|++|+||||+||++++++.
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~ 163 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEK 163 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCc
Confidence 4455543 2356899999999998765321 234567889999999999999999999999999999999
Q ss_pred EEEEecCCccccCC
Q 042772 447 VVLTDFDLSFMTSC 460 (489)
Q Consensus 447 vKL~DFGlS~~~~~ 460 (489)
++|+|||++.....
T Consensus 164 ~~liDfg~~~~~~~ 177 (198)
T cd05144 164 IYIIDWPQMVSTDH 177 (198)
T ss_pred EEEEECCccccCCC
Confidence 99999999965543
No 415
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.73 E-value=1e-16 Score=155.99 Aligned_cols=148 Identities=38% Similarity=0.586 Sum_probs=129.5
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCC-CcceeeEEEEeCCeEEEEEe
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHP-FLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hp-nIv~l~~~~~~~~~~~lVmE 386 (489)
|.+.+.||.|+||.||++.+. ..+++|.+.............+.+|..++..+.|+ +++++++.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 678889999999999999988 78899999876544434577888999999999988 79999999988778899999
Q ss_pred cCCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC-cEEEEecCCcccc
Q 042772 387 FCPGGELFALLDKQPM-KIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG-HVVLTDFDLSFMT 458 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~-~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g-~vKL~DFGlS~~~ 458 (489)
++.++++.+++..... ..+++.....++.|++.++.|+|+.+++|||+||+||+++..+ .++++|||++...
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~ 152 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLL 152 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceec
Confidence 9999999977776532 1488999999999999999999999999999999999999988 7999999998633
No 416
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.73 E-value=3.5e-17 Score=178.25 Aligned_cols=141 Identities=20% Similarity=0.234 Sum_probs=112.9
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeeccccc-----chHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCe
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVML-----NRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTH 380 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~-----~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 380 (489)
..|...+.||+|+||.||++.+.... +++|........ ......++.+|..+++.++|++++....++.....
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 34567889999999999999876543 344432221111 11234568889999999999999988777777777
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
.++||||++|++|.+++. ....++.|++.+|.|||+.|++||||||+|||+ .++.++|+|||+|+...
T Consensus 411 ~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~~ 478 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYSD 478 (535)
T ss_pred CEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccCC
Confidence 899999999999999885 245688899999999999999999999999999 67899999999997643
No 417
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.72 E-value=1.6e-17 Score=167.02 Aligned_cols=184 Identities=16% Similarity=0.151 Sum_probs=148.4
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCC-----CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGA-----GELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT 377 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~t-----g~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 377 (489)
+...+++....+-+|.||.||.|.+... .+.|-+|.++.. .++-.+..+..|.-++..+.|||+..+.+.+..
T Consensus 281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie 358 (563)
T KOG1024|consen 281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE 358 (563)
T ss_pred hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCccceeEEEee
Confidence 3456788889999999999999977643 234455655432 245567788888888888999999999987754
Q ss_pred C-CeEEEEEecCCCCCHHHHHhh------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEE
Q 042772 378 S-THICLITDFCPGGELFALLDK------QPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLT 450 (489)
Q Consensus 378 ~-~~~~lVmEy~~ggsL~~~L~~------~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~ 450 (489)
+ ...++++.+..-|+|..+|.. ...+.++..+...++.|++.|++|||++|+||.||..+|++||+..++||+
T Consensus 359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVklt 438 (563)
T KOG1024|consen 359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLT 438 (563)
T ss_pred ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEec
Confidence 4 568889999999999999973 233457788889999999999999999999999999999999999999999
Q ss_pred ecCCccccCC-----------C------------CceeecccccchHHHHHHH-HhCCcccC
Q 042772 451 DFDLSFMTSC-----------K------------PQVFYHAHVNGFYFIMYKW-LTGYFTYV 488 (489)
Q Consensus 451 DFGlS~~~~~-----------~------------~~~~~~~~v~s~g~~a~e~-~~G~lpY~ 488 (489)
|=.+|+.+.. . .++...+|+|++|+.++|+ .+|..||-
T Consensus 439 DsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pya 500 (563)
T KOG1024|consen 439 DSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYA 500 (563)
T ss_pred cchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcc
Confidence 9999985431 1 2233567999999999998 58999984
No 418
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=99.72 E-value=3.7e-17 Score=136.04 Aligned_cols=104 Identities=28% Similarity=0.461 Sum_probs=95.2
Q ss_pred cCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHhhhcccccccc
Q 042772 77 EKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALWKKNYGVYNFT 156 (489)
Q Consensus 77 ~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (489)
++++++.|+ ++.|+++|++|++++||+++|++|+++..+..+.
T Consensus 1 p~~i~i~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~---------------------------------- 43 (104)
T PF13426_consen 1 PDGIFILDP---DGRILYVNPAFERLFGYSREELIGKSISDFFPEE---------------------------------- 43 (104)
T ss_dssp -SEEEEEET---TSBEEEE-HHHHHHHTS-HHHHTTSBGGGGCSTT----------------------------------
T ss_pred CEEEEEECC---cCcEEehhHHHHHHHCcCHHHHcCCCcccccCcc----------------------------------
Confidence 578999999 9999999999999999999999999998777654
Q ss_pred cCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCCc
Q 042772 157 LGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSD 225 (489)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~Te 225 (489)
......+.+.+++..++.++.++..++++|+.+|+.++++|++|.+|++.+++++.+||||
T Consensus 44 --------~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 44 --------DRPEFEEQIERALEEGGSWSGEVRLRRKDGETFWVEVSASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp --------SCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEEEEEEEEEEEETTSSEEEEEEEEEEEHH
T ss_pred --------cchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 5778889999999999999999999999999999999999999999999999999999986
No 419
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.71 E-value=1.1e-17 Score=169.86 Aligned_cols=141 Identities=23% Similarity=0.350 Sum_probs=125.8
Q ss_pred cCcccccccCCCCceEEEEEEEcC---CCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeCCeE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQG---AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTSTHI 381 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~---tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~ 381 (489)
..|..+++||.|+|++||++.+.. .++.||+|.+... ....++.+|+++|..+ .+.||+++.+++...+++
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t-----s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v 110 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT-----SSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV 110 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc-----cCchHHHHHHHHHHHhccchhhhcchhhhccCCee
Confidence 469999999999999999999877 7889999998643 2235688899999988 489999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEe-cCCcEEEEecCCcc
Q 042772 382 CLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQ-KDGHVVLTDFDLSF 456 (489)
Q Consensus 382 ~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld-~~g~vKL~DFGlS~ 456 (489)
.+||||+++-+..++... ++...++.++..++.||.++|.+|||||||||.|+|.+ ..+.-.|+|||+|-
T Consensus 111 ~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 111 AIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred EEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHH
Confidence 999999999998888765 67888999999999999999999999999999999997 45678899999984
No 420
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.70 E-value=1.6e-16 Score=148.44 Aligned_cols=140 Identities=21% Similarity=0.206 Sum_probs=100.6
Q ss_pred ccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHH---------------------HHHHHHHHHhCCCC--C
Q 042772 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHR---------------------ACIEREIMSLLDHP--F 367 (489)
Q Consensus 311 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~---------------------~~~E~~il~~l~Hp--n 367 (489)
.+.||+|+||+||+|.+. +++.||+|++............. ...|...+..+.+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 568999999999999987 78999999987643221111111 13455566665443 3
Q ss_pred cceeeEEEEeCCeEEEEEecCCCCCHHH-HHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCC
Q 042772 368 LPTLYASFQTSTHICLITDFCPGGELFA-LLDKQPMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDG 445 (489)
Q Consensus 368 Iv~l~~~~~~~~~~~lVmEy~~ggsL~~-~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~-~gIvHrDLKP~NILld~~g 445 (489)
+++++++ ...+++|||++++.+.. .+.... . ...+..++.+++.++.++|. +||+|+||||+||+++ ++
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhh---h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CC
Confidence 4555543 23699999999854432 122111 1 15678889999999999999 9999999999999999 89
Q ss_pred cEEEEecCCccccCC
Q 042772 446 HVVLTDFDLSFMTSC 460 (489)
Q Consensus 446 ~vKL~DFGlS~~~~~ 460 (489)
.++|+|||.+.....
T Consensus 152 ~~~liDfg~a~~~~~ 166 (187)
T cd05119 152 KVYIIDVPQAVEIDH 166 (187)
T ss_pred cEEEEECcccccccC
Confidence 999999999976554
No 421
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.66 E-value=1.6e-15 Score=148.61 Aligned_cols=139 Identities=22% Similarity=0.315 Sum_probs=105.9
Q ss_pred cccC-CCCceEEEEEEEcCCCcEEEEEEeecccc----------cchHHHHHHHHHHHHHHhCCCCCc--ceeeEEEEeC
Q 042772 312 KPLG-CGDTGSVHLVELQGAGELYAMKAMEKSVM----------LNRNKVHRACIEREIMSLLDHPFL--PTLYASFQTS 378 (489)
Q Consensus 312 ~~LG-~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~----------~~~~~~~~~~~E~~il~~l~HpnI--v~l~~~~~~~ 378 (489)
..|| .|+.|+||.+... +..+++|.+..... .......++.+|..++..+.|++| +..+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 3466 7888888888765 67889998854211 011234567889999999998775 6677654432
Q ss_pred -C---eEEEEEecCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecC
Q 042772 379 -T---HICLITDFCPG-GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFD 453 (489)
Q Consensus 379 -~---~~~lVmEy~~g-gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFG 453 (489)
. ..++|||+++| .+|.+++... .+++.. +.|++.+|.+||++||+||||||.|||++.++.++|+|||
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg 187 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA---PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFD 187 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC---CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECC
Confidence 2 23599999997 6999888653 355543 5689999999999999999999999999999999999999
Q ss_pred CccccC
Q 042772 454 LSFMTS 459 (489)
Q Consensus 454 lS~~~~ 459 (489)
.+....
T Consensus 188 ~~~~~~ 193 (239)
T PRK01723 188 RGELRT 193 (239)
T ss_pred CcccCC
Confidence 998755
No 422
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.63 E-value=2.5e-15 Score=132.80 Aligned_cols=133 Identities=25% Similarity=0.242 Sum_probs=110.8
Q ss_pred cccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC--CCcceeeEEEEeCCeEEEEEec
Q 042772 310 PIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDH--PFLPTLYASFQTSTHICLITDF 387 (489)
Q Consensus 310 ~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~H--pnIv~l~~~~~~~~~~~lVmEy 387 (489)
+++.||.|.++.||++...+ ..+++|....... ...+..|..+++.+.| +++++++.++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 45789999999999999864 6789998865421 3567789999999876 5899999888887889999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCCCCEEEecCCcEEEEecCCcccc
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCL---GIIYRDLKPENILLQKDGHVVLTDFDLSFMT 458 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~---gIvHrDLKP~NILld~~g~vKL~DFGlS~~~ 458 (489)
++++++..+ +......++.+++.++.+||.. +++|+|++|+||++++.+.++++|||.+...
T Consensus 75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 988777543 3455666788999999999984 7999999999999999899999999998643
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.62 E-value=1.2e-15 Score=171.72 Aligned_cols=149 Identities=27% Similarity=0.410 Sum_probs=118.6
Q ss_pred CccccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC---CCCcceeeEEEE
Q 042772 300 GEKIGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD---HPFLPTLYASFQ 376 (489)
Q Consensus 300 ~~~i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~l~~~~~ 376 (489)
..+++...|.+.+.||+|+||+||+|.... |+.||+|+-++..... |..=.+++.+|+ -+.|..+..++.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE------fYI~~q~~~RLk~~~~~~~~~~~~a~~ 764 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE------FYICLQVMERLKPQMLPSIMHISSAHV 764 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee------eeehHHHHHhhchhhhcchHHHHHHHc
Confidence 345667789999999999999999999887 9999999876654322 112223333443 244556666666
Q ss_pred eCCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-------CCcEEE
Q 042772 377 TSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQK-------DGHVVL 449 (489)
Q Consensus 377 ~~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~-------~g~vKL 449 (489)
-.+.-++|+||.+.|+|.+++.. .+..++..+.++..|++..|++||..+|||+||||+|+||.. +-.++|
T Consensus 765 ~~~~S~lv~ey~~~Gtlld~~N~--~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~l 842 (974)
T KOG1166|consen 765 FQNASVLVSEYSPYGTLLDLINT--NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYL 842 (974)
T ss_pred cCCcceeeeeccccccHHHhhcc--CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEE
Confidence 66778999999999999999974 456899999999999999999999999999999999999942 236999
Q ss_pred EecCCccc
Q 042772 450 TDFDLSFM 457 (489)
Q Consensus 450 ~DFGlS~~ 457 (489)
+|||.|..
T Consensus 843 IDfG~siD 850 (974)
T KOG1166|consen 843 IDFGRSID 850 (974)
T ss_pred Eeccccee
Confidence 99999953
No 424
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.61 E-value=9.7e-17 Score=170.28 Aligned_cols=173 Identities=42% Similarity=0.655 Sum_probs=146.7
Q ss_pred ccCCCCceEEEEEEE---cCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCCeEEEEEecC
Q 042772 313 PLGCGDTGSVHLVEL---QGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTSTHICLITDFC 388 (489)
Q Consensus 313 ~LG~G~fG~Vy~a~~---~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lVmEy~ 388 (489)
.+|+|+||.|+++.- ...|+.||+|+..+.....+... ....|..++...+ ||++++++.+|+.+..++++++|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 379999999998763 35678999999987655444433 5667889999887 999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC-----C---
Q 042772 389 PGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS-----C--- 460 (489)
Q Consensus 389 ~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~-----~--- 460 (489)
.||+|...+..... +.+.....+.+.++.+++++|+.+|+|||+|++||+++.+|++++.|||+++..- |
T Consensus 80 rgg~lft~l~~~~~--f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~ 157 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVM--FDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTY 157 (612)
T ss_pred ccchhhhccccCCc--hHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccch
Confidence 99999999987644 7889999999999999999999999999999999999999999999999996432 1
Q ss_pred ---CCc----eeecccccchHHHHHHHHhCCcccC
Q 042772 461 ---KPQ----VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ---~~~----~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
.|+ .....|-|++|..+.++++|..||.
T Consensus 158 eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~ 192 (612)
T KOG0603|consen 158 EYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFG 192 (612)
T ss_pred hhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCc
Confidence 111 2234577999999999999999986
No 425
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.56 E-value=1.7e-15 Score=172.41 Aligned_cols=123 Identities=13% Similarity=0.151 Sum_probs=93.5
Q ss_pred CC-CCcceeeEEE-------EeCCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 042772 364 DH-PFLPTLYASF-------QTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLK 435 (489)
Q Consensus 364 ~H-pnIv~l~~~~-------~~~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLK 435 (489)
.| +||..++++| .....++.+|||+ +++|.++|... ...+++..+..++.||+.||.|||++||+|||||
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlK 107 (793)
T PLN00181 30 SHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVR 107 (793)
T ss_pred hHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence 45 5777777777 2234578888988 67999999754 3458999999999999999999999999999999
Q ss_pred CCCEEEec-------------------CCcEEEEecCCccccC-------------------------------CCCce-
Q 042772 436 PENILLQK-------------------DGHVVLTDFDLSFMTS-------------------------------CKPQV- 464 (489)
Q Consensus 436 P~NILld~-------------------~g~vKL~DFGlS~~~~-------------------------------~~~~~- 464 (489)
|+||||+. ++.+|++|||+++... .+|+.
T Consensus 108 P~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 187 (793)
T PLN00181 108 PSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEED 187 (793)
T ss_pred chhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhh
Confidence 99999954 4556777777775311 11221
Q ss_pred -----eecccccchHHHHHHHHhCCcccC
Q 042772 465 -----FYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 465 -----~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
....|+|++|++++|+++|..|+.
T Consensus 188 ~~~~~~~~sDVwSlGviL~ELl~~~~~~~ 216 (793)
T PLN00181 188 NGSSSNCASDVYRLGVLLFELFCPVSSRE 216 (793)
T ss_pred ccCCCCchhhhhhHHHHHHHHhhCCCchh
Confidence 123488999999999998877753
No 426
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.52 E-value=4.8e-14 Score=149.81 Aligned_cols=148 Identities=22% Similarity=0.240 Sum_probs=100.2
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccch---------------------------HHHH-------
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNR---------------------------NKVH------- 351 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~---------------------------~~~~------- 351 (489)
..|. .++||+|++|+||+|..+ +|+.||||+..+.....- ..++
T Consensus 118 ~~fd-~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~ 195 (437)
T TIGR01982 118 AEFE-EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLR 195 (437)
T ss_pred hhCC-CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHH
Confidence 3444 378999999999999986 589999999876421100 0000
Q ss_pred ---HHHHHHHHHHhC----C-CCCcceeeEEEEeCCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHH-HHH
Q 042772 352 ---RACIEREIMSLL----D-HPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI-GLE 422 (489)
Q Consensus 352 ---~~~~E~~il~~l----~-HpnIv~l~~~~~~~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~-aL~ 422 (489)
.+.+|...+.++ . +++|.-..-++...+..+|||||++|++|.++....... .+ ...++.+++. .+.
T Consensus 196 ~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~-~~---~~~ia~~~~~~~l~ 271 (437)
T TIGR01982 196 RELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG-LD---RKALAENLARSFLN 271 (437)
T ss_pred HHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC-CC---HHHHHHHHHHHHHH
Confidence 133455544444 2 344332222223344579999999999998876542211 22 2334555555 477
Q ss_pred HHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 423 YLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 423 yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
.+|..|++|+|+||.||+++.+|.++++|||++...+
T Consensus 272 ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 272 QVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 8999999999999999999999999999999997654
No 427
>PRK13557 histidine kinase; Provisional
Probab=99.52 E-value=9.3e-14 Score=149.57 Aligned_cols=126 Identities=42% Similarity=0.777 Sum_probs=113.7
Q ss_pred hhhHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHH
Q 042772 66 GIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLAL 145 (489)
Q Consensus 66 ~~~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (489)
...+..+++.+.++|+++|+..++++|+|+|++|++++||+++|++|+++.++..+.
T Consensus 29 ~~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~----------------------- 85 (540)
T PRK13557 29 SDIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPE----------------------- 85 (540)
T ss_pred hHHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCC-----------------------
Confidence 445789999999999999987679999999999999999999999999998887664
Q ss_pred hhhcccccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCCc
Q 042772 146 WKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSD 225 (489)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~Te 225 (489)
.+......++..+..++.+..++.+++|+|+.+|...++.|++|.+|.+++++++.+|+|+
T Consensus 86 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~ 146 (540)
T PRK13557 86 -------------------TDRATVAEVRDAIAERREIATEILNYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSR 146 (540)
T ss_pred -------------------CCHHHHHHHHHHHHcCCCceEEEEEEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHH
Confidence 5677778889999999999999999999999999999999999999999999999999999
Q ss_pred cccccccc
Q 042772 226 HVEPLRNR 233 (489)
Q Consensus 226 ~ke~e~~~ 233 (489)
+++.+++.
T Consensus 147 ~~~~e~~l 154 (540)
T PRK13557 147 RRDAEDAL 154 (540)
T ss_pred HHHHHHHH
Confidence 98776543
No 428
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.51 E-value=1.2e-14 Score=156.88 Aligned_cols=148 Identities=17% Similarity=0.244 Sum_probs=96.9
Q ss_pred cccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccc---------------------------h----HHHHH
Q 042772 304 GLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN---------------------------R----NKVHR 352 (489)
Q Consensus 304 ~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~---------------------------~----~~~~~ 352 (489)
-...|.. ++||+|++|+||+|..+.+|+.||+|++.+..... . ...+.
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 3456777 89999999999999999889999999997652110 0 01111
Q ss_pred ------HHHHHHHHHhC----CCCCcceeeEEE-EeCCeEEEEEecCCCCCHHHH--HhhCCC--CCCCHHHHHHHHHHH
Q 042772 353 ------ACIEREIMSLL----DHPFLPTLYASF-QTSTHICLITDFCPGGELFAL--LDKQPM--KIFREDSARFYAAEV 417 (489)
Q Consensus 353 ------~~~E~~il~~l----~HpnIv~l~~~~-~~~~~~~lVmEy~~ggsL~~~--L~~~~~--~~l~e~~~~~i~~qI 417 (489)
+.+|...+.++ .+.+.+.+-..+ ...+..+|||||+.|+++.++ +...+. ..+.+..+..++.|
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q- 275 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ- 275 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH-
Confidence 22333333333 233222222222 234567899999999999874 332211 01333333334444
Q ss_pred HHHHHHHHHCCCeecCCCCCCEEEecCC----cEEEEecCCccccC
Q 042772 418 VIGLEYLHCLGIIYRDLKPENILLQKDG----HVVLTDFDLSFMTS 459 (489)
Q Consensus 418 ~~aL~yLH~~gIvHrDLKP~NILld~~g----~vKL~DFGlS~~~~ 459 (489)
++..|++|+|+||.||+++.+| .++++|||++...+
T Consensus 276 ------if~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 276 ------VFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ------HHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 4469999999999999999888 99999999986554
No 429
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.49 E-value=1e-14 Score=160.00 Aligned_cols=177 Identities=25% Similarity=0.362 Sum_probs=130.9
Q ss_pred ccccccCCCCceEEEEEEEcCCCcEEEEEEeec---ccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 309 KPIKPLGCGDTGSVHLVELQGAGELYAMKAMEK---SVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 309 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~---~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
.....+|.|++|.|+.+........++.|.... ...........+..|.-+-..+.|||++..+..+.+.....-.|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 466789999999888888776666666665431 11122223333555666677889999887776666555455559
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC----
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK---- 461 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~---- 461 (489)
|||++ +|+.++... ..+....+..++.|++.||.|||.+||.||||||+|+++..+|.+||+|||.+.....+
T Consensus 401 E~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~ 477 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKN 477 (601)
T ss_pred hcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchh
Confidence 99999 999999875 23788889999999999999999999999999999999999999999999998532211
Q ss_pred ---------------Ccee-------ecccccchHHHHHHHHhCCcccC
Q 042772 462 ---------------PQVF-------YHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 462 ---------------~~~~-------~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
|+.. ...++|+.|.+...|.+|..||-
T Consensus 478 ~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk 526 (601)
T KOG0590|consen 478 IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWK 526 (601)
T ss_pred hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccc
Confidence 1111 12266777777777777777774
No 430
>PRK13559 hypothetical protein; Provisional
Probab=99.48 E-value=4.1e-13 Score=138.27 Aligned_cols=125 Identities=42% Similarity=0.757 Sum_probs=110.7
Q ss_pred hhhhHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHH
Q 042772 65 QGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLA 144 (489)
Q Consensus 65 ~~~~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (489)
.+..+..+++.++++++++|+.-++++|+++|++|++++||+.+|++|+++.++..+.
T Consensus 41 ~~~~~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~---------------------- 98 (361)
T PRK13559 41 SGRLFEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAA---------------------- 98 (361)
T ss_pred hhhHHHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCC----------------------
Confidence 3455778899999999999986667889999999999999999999999988776543
Q ss_pred HhhhcccccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCC
Q 042772 145 LWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGS 224 (489)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~T 224 (489)
........+++++..+..+..+...+++||+.+|+.+++.|++|.+|.+.+++++.+|||
T Consensus 99 --------------------~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DIT 158 (361)
T PRK13559 99 --------------------TDPIAVAKIRAAIAAEREIVVELLNYRKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVT 158 (361)
T ss_pred --------------------CCHHHHHHHHHHhccCCceEEEEEEEcCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehh
Confidence 456667778889999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 042772 225 DHVEPLR 231 (489)
Q Consensus 225 e~ke~e~ 231 (489)
++++.++
T Consensus 159 erk~~e~ 165 (361)
T PRK13559 159 DIRAVRA 165 (361)
T ss_pred cchhhHH
Confidence 9987653
No 431
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.48 E-value=1.4e-13 Score=137.54 Aligned_cols=181 Identities=19% Similarity=0.242 Sum_probs=117.3
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC----------CCcceeeEEEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDH----------PFLPTLYASFQ 376 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~H----------pnIv~l~~~~~ 376 (489)
.+...+.||.|+++.||.+++..|++.+|+|+............+.+.+|.-....+.+ -.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 35677899999999999999999999999999865543444556677666655444322 12332223221
Q ss_pred ---------eC---C-----eEEEEEecCCCCCHHHHHhh---CCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 042772 377 ---------TS---T-----HICLITDFCPGGELFALLDK---QPMK--IFREDSARFYAAEVVIGLEYLHCLGIIYRDL 434 (489)
Q Consensus 377 ---------~~---~-----~~~lVmEy~~ggsL~~~L~~---~~~~--~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDL 434 (489)
.. + ..+++|+-+ .++|.+++.. .... .+.......+..|++..+++||..|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 11 1 247788877 5699888653 1111 1112223445589999999999999999999
Q ss_pred CCCCEEEecCCcEEEEecCCccccC------------CCCc--------------eeecccccchHHHHHHHHhCCcccC
Q 042772 435 KPENILLQKDGHVVLTDFDLSFMTS------------CKPQ--------------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 435 KP~NILld~~g~vKL~DFGlS~~~~------------~~~~--------------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
||+|+|++.+|.++|+||+...... .+|+ .....|.|.+|.+++.|.||.+||+
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~ 251 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFG 251 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STC
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCC
Confidence 9999999999999999998653211 1111 1122288999999999999999996
No 432
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=99.47 E-value=2.6e-13 Score=114.03 Aligned_cols=110 Identities=22% Similarity=0.332 Sum_probs=95.9
Q ss_pred HHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHhhhcccc
Q 042772 73 LERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALWKKNYGV 152 (489)
Q Consensus 73 ~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (489)
||++++++++.|+ ++.|+++|+++.++.|++.++++|+++.-+..++
T Consensus 1 l~~~p~~i~v~D~---~~~i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~------------------------------ 47 (110)
T PF08448_consen 1 LDSSPDGIFVIDP---DGRIVYANQAAAELFGVSPEELIGRSLFDLLPPE------------------------------ 47 (110)
T ss_dssp HHHCSSEEEEEET---TSBEEEE-HHHHHHHTSTHHHHTTSBHHHHSCCG------------------------------
T ss_pred CCCCCceeEEECC---CCEEEEEHHHHHHHhCCCHHHHhhccchhccccc------------------------------
Confidence 6889999999999 9999999999999999999999999987554442
Q ss_pred cccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCCcccc
Q 042772 153 YNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVE 228 (489)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~Te~ke 228 (489)
..+.....+.+++..+.....+..... +|...|..++++|++|.+|++.+++.+.+|||++++
T Consensus 48 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 48 ------------DREEFQAALRRALAGGEPVFFEEILLR-DGEERWFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp ------------CHHHHHHHHHHHHHHTSEEEEEEEECT-TSCEEEEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred ------------hhhhhHHHHHHhhccCceEEEEEEEee-cCCcEEEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 455667788899998888877766655 999999999999999999999999999999999874
No 433
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=99.46 E-value=4.9e-13 Score=112.96 Aligned_cols=111 Identities=21% Similarity=0.355 Sum_probs=93.0
Q ss_pred hHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHhh
Q 042772 68 DLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALWK 147 (489)
Q Consensus 68 ~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (489)
.+.++++.+++++++.|. +|.|+|+|++|++++||+++|++|+++..+..+.
T Consensus 2 ~~~~i~~~~~~~i~~~d~---~g~I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~------------------------- 53 (113)
T PF00989_consen 2 RYRAILENSPDGIFVIDE---DGRILYVNQAAEELLGYSREELIGKSLFDLIHPE------------------------- 53 (113)
T ss_dssp HHHHHHHCSSSEEEEEET---TSBEEEECHHHHHHHSS-HHHHTTSBGGGGCSGG-------------------------
T ss_pred HHHHHHhcCCceEEEEeC---cCeEEEECHHHHHHHccCHHHHcCCcHHHhcCch-------------------------
Confidence 367899999999999998 9999999999999999999999999987665443
Q ss_pred hcccccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeee-cCCCeeeEEEeecccccCCCCeeEEeeeeccC
Q 042772 148 KNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYT-KSGKKFWNLFHLQPMRDHKGELQYFIGVQLDG 223 (489)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~ 223 (489)
......+.+.+.+..++.....-.... ++|+.+|+.++.+|++|..|++.+++++.+||
T Consensus 54 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 54 -----------------DRRELRERLRQALSQGESGESFEVRFRLRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp -----------------GHHHHHHHHHHHHHHCCHECEEEEEEEETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred -----------------hhHHHHHHHHHHHHcCCCceeEEEEEEecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 233577788888888877655444444 59999999999999999999999999999997
No 434
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=99.44 E-value=2.8e-13 Score=141.20 Aligned_cols=124 Identities=27% Similarity=0.615 Sum_probs=109.5
Q ss_pred HHHHHHhc---cCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHH
Q 042772 69 LATTLERI---EKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLAL 145 (489)
Q Consensus 69 ~~~~~~~~---~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (489)
|+.++.+. ..+|++.++.+-|-||+|+|++|+++.||.|.|++.+.| +|.||
T Consensus 16 LENiiRRsn~~dtsFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~-------------------tc~FM------ 70 (971)
T KOG0501|consen 16 LENIIRRSNNADTSFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSC-------------------TCSFM------ 70 (971)
T ss_pred HHHHHhhccCCCcceeeccceeeccceEEecCcchhccCccHHHHhcccc-------------------eeeee------
Confidence 44444444 368999999999999999999999999999999999985 24444
Q ss_pred hhhcccccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCCc
Q 042772 146 WKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSD 225 (489)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~Te 225 (489)
||| -+|..+++++++++.+.+.-++|+..|+|+-+|.|..+.+.|++|++..++-|+..++|||.
T Consensus 71 ----yGE-----------ltdk~ti~k~~~t~eN~~~~qfEillyKKN~TPvW~~vqiAPIrNe~d~VVLfLctFkDIT~ 135 (971)
T KOG0501|consen 71 ----YGE-----------LTDKGTIEKVRQTLENYETNQFEILLYKKNRTPVWLLVQIAPIRNEKDKVVLFLCTFKDITA 135 (971)
T ss_pred ----ecc-----------ccchhhHHHHHHHHHhhhhcceeeEeeecCCCceEEEEEeecccCCCceEEEEEeecccchh
Confidence 444 48999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 042772 226 HVEPLRN 232 (489)
Q Consensus 226 ~ke~e~~ 232 (489)
.|++...
T Consensus 136 ~KQPidd 142 (971)
T KOG0501|consen 136 LKQPIDD 142 (971)
T ss_pred hcCCCcc
Confidence 9987743
No 435
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.37 E-value=1.9e-13 Score=138.33 Aligned_cols=89 Identities=26% Similarity=0.383 Sum_probs=75.7
Q ss_pred CCCCcceeeEEEEe---------------------------CCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHH
Q 042772 364 DHPFLPTLYASFQT---------------------------STHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAE 416 (489)
Q Consensus 364 ~HpnIv~l~~~~~~---------------------------~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~q 416 (489)
+|||||.+.++|.+ ...+|+||.-++ .+|.+++..+. .+......++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~---~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH---RSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC---CchHHHHHHHHH
Confidence 69999999998843 235899999885 49999998753 578888899999
Q ss_pred HHHHHHHHHHCCCeecCCCCCCEEEe--cCC--cEEEEecCCcc
Q 042772 417 VVIGLEYLHCLGIIYRDLKPENILLQ--KDG--HVVLTDFDLSF 456 (489)
Q Consensus 417 I~~aL~yLH~~gIvHrDLKP~NILld--~~g--~vKL~DFGlS~ 456 (489)
+++|+.|||++||.|||||.+|||+. +++ .+.|+|||++-
T Consensus 350 lLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL 393 (598)
T KOG4158|consen 350 LLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL 393 (598)
T ss_pred HHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence 99999999999999999999999993 444 57899999874
No 436
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.36 E-value=3.4e-12 Score=116.88 Aligned_cols=128 Identities=29% Similarity=0.302 Sum_probs=95.1
Q ss_pred ccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCC-cceeeEEEEeCCeEEEEEecCC
Q 042772 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPF-LPTLYASFQTSTHICLITDFCP 389 (489)
Q Consensus 311 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~l~~~~~~~~~~~lVmEy~~ 389 (489)
++.|+.|.++.||++... +..|++|....... ....+..|..+++.+.+.+ +++++.+.. ...++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 467899999999999865 77899998754421 1123456888888876544 445555432 33589999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-----eecCCCCCCEEEecCCcEEEEecCCccc
Q 042772 390 GGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGI-----IYRDLKPENILLQKDGHVVLTDFDLSFM 457 (489)
Q Consensus 390 ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gI-----vHrDLKP~NILld~~g~vKL~DFGlS~~ 457 (489)
|.++.+. . . .....+.+++.+|..||+.++ +|+|++|.||+++ ++.++++|||.+..
T Consensus 75 G~~l~~~--~-----~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 75 GSELLTE--D-----F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred CCccccc--c-----c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 9887543 0 1 112356789999999999885 9999999999999 67899999999864
No 437
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.28 E-value=5.4e-11 Score=113.02 Aligned_cols=141 Identities=16% Similarity=0.120 Sum_probs=101.7
Q ss_pred ccccCCCCceEEEEEEEcC------CCcEEEEEEeecccccc-------------------hHHHHH----HHHHHHHHH
Q 042772 311 IKPLGCGDTGSVHLVELQG------AGELYAMKAMEKSVMLN-------------------RNKVHR----ACIEREIMS 361 (489)
Q Consensus 311 ~~~LG~G~fG~Vy~a~~~~------tg~~vAiK~i~~~~~~~-------------------~~~~~~----~~~E~~il~ 361 (489)
...||.|--+.||.|.... .+..+|+|+...+.... .+..+. ...|...|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999998553 35789999885432110 011222 337888888
Q ss_pred hCC--CCCcceeeEEEEeCCeEEEEEecCCCCCHHH-HHhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeecCCCCC
Q 042772 362 LLD--HPFLPTLYASFQTSTHICLITDFCPGGELFA-LLDKQPMKIFREDSARFYAAEVVIGLEYL-HCLGIIYRDLKPE 437 (489)
Q Consensus 362 ~l~--HpnIv~l~~~~~~~~~~~lVmEy~~ggsL~~-~L~~~~~~~l~e~~~~~i~~qI~~aL~yL-H~~gIvHrDLKP~ 437 (489)
++. .-+++.++++ ...+|||||+.+..+.. .++. ..+++.....+..+++.+|..| |+.||+|+||+|.
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~ 154 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEY 154 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 885 3567777764 45789999996654432 2322 2255566777788999999998 8999999999999
Q ss_pred CEEEecCCcEEEEecCCccccC
Q 042772 438 NILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 438 NILld~~g~vKL~DFGlS~~~~ 459 (489)
||+++ ++.+.|+|||.|....
T Consensus 155 NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 155 NMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HEEEE-CCcEEEEECCCceeCC
Confidence 99997 5789999999987654
No 438
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=99.27 E-value=3.1e-11 Score=137.15 Aligned_cols=122 Identities=13% Similarity=0.081 Sum_probs=105.5
Q ss_pred hhHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHh
Q 042772 67 IDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALW 146 (489)
Q Consensus 67 ~~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (489)
..+..+++.+++++++.|+ +|.|+++|++|++++||+++|++|+++..+..++
T Consensus 155 ~~l~~il~~~~~~i~~~D~---~g~i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~------------------------ 207 (779)
T PRK11091 155 SLLRSFLDASPDLVYYRNE---DGEFSGCNRAMELLTGKSEKQLIGLTPKDVYSPE------------------------ 207 (779)
T ss_pred HHHHHHHhcCcceEEEECC---CCcEEeEcHHHHHHhCcCHHHHcCCChHHhCCHH------------------------
Confidence 4478899999999999999 9999999999999999999999999976555443
Q ss_pred hhcccccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCCcc
Q 042772 147 KKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDH 226 (489)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~Te~ 226 (489)
............+..+..++.+....+++|+.+|..++..|++|.+|...+++++.+|||++
T Consensus 208 ------------------~~~~~~~~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~ 269 (779)
T PRK11091 208 ------------------AAEKVIETDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITER 269 (779)
T ss_pred ------------------HHHHHHHHHHHHHhcCCCeEEEEEEEcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHH
Confidence 23334455666777888899999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 042772 227 VEPLRNR 233 (489)
Q Consensus 227 ke~e~~~ 233 (489)
++++++.
T Consensus 270 k~~e~~l 276 (779)
T PRK11091 270 KRYQDAL 276 (779)
T ss_pred HHHHHHH
Confidence 9877553
No 439
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=99.26 E-value=3e-11 Score=128.44 Aligned_cols=128 Identities=17% Similarity=0.077 Sum_probs=93.1
Q ss_pred hHHHHHHHHHhhh-hHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCC-hhhhcCCCccccccccchhhhhhccc
Q 042772 55 DRAERERDIRQGI-DLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYT-REEILGRNCSFLELTEYTREEILGRN 132 (489)
Q Consensus 55 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~-~~e~~g~~~~~l~~~~~~~~~~~~~~ 132 (489)
|++++.+.+++.. .+..+++.++++|+++|+ +|.|+++|++|++++||+ .++++|+++..+..+.
T Consensus 239 dit~~~~~e~~~~~~~~~l~e~~~d~I~v~D~---~G~I~~~N~a~~~l~G~~~~~~l~G~~~~~~~~~~---------- 305 (442)
T TIGR02040 239 PAGATQPVGDELSENLARLYHEAPDAIVFSDA---DGTIRGANEAFLELTDSSSLEAVRGRTLDRWLGRG---------- 305 (442)
T ss_pred ccchhhhhhHHHHHHHHHHHHhCCceEEEEcC---CCcEEehhHHHHHHhCCCChHHHcCCCHHHHhCCC----------
Confidence 3455544443333 588999999999999999 999999999999999997 5789999975332221
Q ss_pred cccchhHHHHHHHhhhcccccccccCcccccCCCHHHHHHHHHHHHcCCc-EEEEEEeeecCCCeeeEEEeecccccCCC
Q 042772 133 CSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQRE-ITVQLINYTKSGKKFWNLFHLQPMRDHKG 211 (489)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~k~g~~~~~~~~~~p~~~~~g 211 (489)
..+ ...+.+.+...+. ...+....++||+.+|+.++++|+.+..+
T Consensus 306 -------------------------------~~~---~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ve~s~~~i~~~~~ 351 (442)
T TIGR02040 306 -------------------------------GVD---LRVLLSNVRRTGQVRLYATTLTGEFGAQTEVEISAAWVDQGER 351 (442)
T ss_pred -------------------------------ccc---HHHHHHHHhhcCceEEEEEEEEcCCCCEEEEEEEEEEeccCCc
Confidence 011 2223333433333 33444557999999999999999987654
Q ss_pred CeeEEeeeeccCCccccccc
Q 042772 212 ELQYFIGVQLDGSDHVEPLR 231 (489)
Q Consensus 212 ~~~~~~~~~~d~Te~ke~e~ 231 (489)
..++++.+|||++++++.
T Consensus 352 --~~~~~v~rDITeR~~~~~ 369 (442)
T TIGR02040 352 --PLIVLVIRDISRRLTMRD 369 (442)
T ss_pred --eEEEEEEecchhhccCCC
Confidence 568899999999998753
No 440
>PRK13558 bacterio-opsin activator; Provisional
Probab=99.25 E-value=4e-11 Score=133.91 Aligned_cols=125 Identities=33% Similarity=0.684 Sum_probs=110.6
Q ss_pred HHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHhhh
Q 042772 69 LATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALWKK 148 (489)
Q Consensus 69 ~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (489)
+..+++..+.++++.|...+++.|+|+|++|++++||+++|++|+++.++..+.
T Consensus 150 ~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~-------------------------- 203 (665)
T PRK13558 150 KERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGED-------------------------- 203 (665)
T ss_pred HHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCC--------------------------
Confidence 467889999999999876678999999999999999999999999987776553
Q ss_pred cccccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCCcccc
Q 042772 149 NYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVE 228 (489)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~Te~ke 228 (489)
........++.++..++.+..++..++++|..+|+.++..|++|..|.+.+++++.+|||++|+
T Consensus 204 ----------------~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~ 267 (665)
T PRK13558 204 ----------------TNEERVAELREAIDEERPTSVELRNYRKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKE 267 (665)
T ss_pred ----------------ccHHHHHHHHHHHhcCCCeEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHH
Confidence 4555667788888889999999999999999999999999999999999999999999999998
Q ss_pred ccccccc
Q 042772 229 PLRNRLS 235 (489)
Q Consensus 229 ~e~~~l~ 235 (489)
.+++...
T Consensus 268 ~E~~L~~ 274 (665)
T PRK13558 268 AELALQR 274 (665)
T ss_pred HHHHHHH
Confidence 8766543
No 441
>PRK13560 hypothetical protein; Provisional
Probab=99.24 E-value=4.1e-11 Score=135.45 Aligned_cols=135 Identities=17% Similarity=0.106 Sum_probs=108.6
Q ss_pred hhHHHHHHHHHhh----hhHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhh
Q 042772 54 WDRAERERDIRQG----IDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEIL 129 (489)
Q Consensus 54 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~ 129 (489)
.|+++|++.+++. ..+..+++.+++++++.|+ ++.|+++|++|++++||+++|++|++...+..+.
T Consensus 187 ~DIT~rk~ae~~l~~~~~~l~~l~e~~~~~i~~~d~---~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~------- 256 (807)
T PRK13560 187 EDITERKRAEERIDEALHFLQQLLDNIADPAFWKDE---DAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQ------- 256 (807)
T ss_pred EccchHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC---CCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcc-------
Confidence 4888888766643 4478899999999999999 9999999999999999999999999987665432
Q ss_pred ccccccchhHHHHHHHhhhcccccccccCcccccCCCHHHH-HHHHHHHHcCCcEEEEEEeeecCCCeeeEEEee--ccc
Q 042772 130 GRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATV-SKIRDAVREQREITVQLINYTKSGKKFWNLFHL--QPM 206 (489)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~--~p~ 206 (489)
....+ ...+..+..++....+....++||+.+|+.+.+ .|+
T Consensus 257 ------------------------------------~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~ 300 (807)
T PRK13560 257 ------------------------------------PADDYQEADAAKFDADGSQIIEAEFQNKDGRTRPVDVIFNHAEF 300 (807)
T ss_pred ------------------------------------hhHHHHHHHHHHhccCCceEEEEEEEcCCCCEEEEEEEecceEE
Confidence 22222 334455566777788888899999999766554 567
Q ss_pred ccCCCCeeEEeeeeccCCcccccccccc
Q 042772 207 RDHKGELQYFIGVQLDGSDHVEPLRNRL 234 (489)
Q Consensus 207 ~~~~g~~~~~~~~~~d~Te~ke~e~~~l 234 (489)
.|..|.+++++++.+|||++++++++..
T Consensus 301 ~~~~g~~~g~~~~~~DITerk~~e~~L~ 328 (807)
T PRK13560 301 DDKENHCAGLVGAITDISGRRAAERELL 328 (807)
T ss_pred EcCCCCEEEEEEEEEechHHHHHHHHHH
Confidence 8999999999999999999998876653
No 442
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.24 E-value=4.6e-12 Score=141.20 Aligned_cols=109 Identities=39% Similarity=0.667 Sum_probs=83.5
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
.+|..++.|..|+||.||++.++.+.+++|+| +++....-++ ++.....|++|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~lilRn----------ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLILRN----------ILTFAGNPFVV---------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhc-ccccchhhhc----------cccccCCccee----------------
Confidence 46999999999999999999999999999995 4443221111 33333455554
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCcc
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSF 456 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~ 456 (489)
|+-..+++.-+ +++-+ ++.+++|+|+.||+|||+||+|.+|..-|++|++|||++.
T Consensus 136 -----gDc~tllk~~g--~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk 191 (1205)
T KOG0606|consen 136 -----GDCATLLKNIG--PLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSK 191 (1205)
T ss_pred -----chhhhhcccCC--CCcch--------hhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhh
Confidence 56666665532 23322 3788999999999999999999999999999999999985
No 443
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.21 E-value=2.2e-10 Score=106.52 Aligned_cols=136 Identities=19% Similarity=0.193 Sum_probs=102.6
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchH-----HHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEe
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-----KVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITD 386 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~-----~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmE 386 (489)
..+++|+-+.+|.+.+. |..+++|.-.+..+..+. ...+..+|..++.++.--.|...+-++.+.....|+||
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 45789999999999775 444666755443332222 34567789999998876666666556667777899999
Q ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 387 FCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 387 y~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
|++|-.|.+.+... . ..++..+-.-+.-||..||+|+||.++||++..++ +.++|||++....
T Consensus 80 ~I~G~~lkd~l~~~-----~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~ 142 (204)
T COG3642 80 YIEGELLKDALEEA-----R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSD 142 (204)
T ss_pred EeCChhHHHHHHhc-----c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccccc
Confidence 99998888888764 1 33556677778889999999999999999997554 9999999997554
No 444
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.20 E-value=6.7e-12 Score=121.76 Aligned_cols=183 Identities=17% Similarity=0.280 Sum_probs=144.8
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 382 (489)
++.....++..|.....|..|+|++.++ .++.|+++...... .....|..|.-.|+.+.||||+.+++.|....++.
T Consensus 187 id~~~lnl~tkl~e~hsgelwrgrwqgn--divakil~vr~~t~-risrdfneefp~lrifshpnilpvlgacnsppnlv 263 (448)
T KOG0195|consen 187 IDVSSLNLITKLAESHSGELWRGRWQGN--DIVAKILNVREVTA-RISRDFNEEFPALRIFSHPNILPVLGACNSPPNLV 263 (448)
T ss_pred cchhhhhhhhhhccCCCcccccccccCc--chhhhhhhhhhcch-hhcchhhhhCcceeeecCCchhhhhhhccCCCCce
Confidence 4456677888999999999999999854 45667776544332 23355777888899999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEEecCCcEEE--EecCCcccc
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLG--IIYRDLKPENILLQKDGHVVL--TDFDLSFMT 458 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~g--IvHrDLKP~NILld~~g~vKL--~DFGlS~~~ 458 (489)
++..|++.|+|+..|+.+.+-..+..++..++.++++|+.|||+.. |..--|....+++|++.+.+| +|--+|+..
T Consensus 264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe 343 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE 343 (448)
T ss_pred EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeec
Confidence 9999999999999999987777889999999999999999999875 445568899999999886654 554444321
Q ss_pred C-----------------CCCceeecccccchHHHHHHHHhCCcccC
Q 042772 459 S-----------------CKPQVFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 459 ~-----------------~~~~~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
. .....+..++.|++...++|+.+..+||.
T Consensus 344 ~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfa 390 (448)
T KOG0195|consen 344 VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFA 390 (448)
T ss_pred cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccc
Confidence 1 01112345688999999999999999984
No 445
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=99.20 E-value=3.5e-11 Score=127.45 Aligned_cols=121 Identities=25% Similarity=0.389 Sum_probs=106.4
Q ss_pred hHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHhh
Q 042772 68 DLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALWK 147 (489)
Q Consensus 68 ~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (489)
.+..+++.++.++++.|. ++.|+|+|++|++++||+++|++|++...+..+.
T Consensus 5 ~~~~i~~~~~~~i~~~d~---~g~~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~------------------------- 56 (494)
T TIGR02938 5 AYRQTVDQAPLAISITDL---KANILYANDAFTRITGYTKEEIIGKNESVLSNHT------------------------- 56 (494)
T ss_pred HHHHHHHhCCceEEEECC---CCcEEEEchhheeecCCCHHHHhCCCchhhcCCC-------------------------
Confidence 467899999999999999 9999999999999999999999999977665443
Q ss_pred hcccccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCCccc
Q 042772 148 KNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHV 227 (489)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~Te~k 227 (489)
........+++++..++.+..++...+++|+.+|....+.|++|.+|.+.+++++.+|||+++
T Consensus 57 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k 119 (494)
T TIGR02938 57 -----------------TPPEVYQALWGSLAEQKPWAGKLLNRRKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELH 119 (494)
T ss_pred -----------------CCHHHHHHHHHHHHhCCcccceeeccCCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHH
Confidence 445566777888888889989988899999999999999999999999999999999999998
Q ss_pred cccccc
Q 042772 228 EPLRNR 233 (489)
Q Consensus 228 e~e~~~ 233 (489)
+++++.
T Consensus 120 ~~e~~l 125 (494)
T TIGR02938 120 RLEQVV 125 (494)
T ss_pred HHHHHH
Confidence 766543
No 446
>PRK10060 RNase II stability modulator; Provisional
Probab=99.19 E-value=1e-10 Score=130.74 Aligned_cols=131 Identities=15% Similarity=0.144 Sum_probs=100.9
Q ss_pred HHHHHHHHHh-hhhHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCcccc-ccccchhhhhhcccc
Q 042772 56 RAERERDIRQ-GIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFL-ELTEYTREEILGRNC 133 (489)
Q Consensus 56 ~~~~~~~~~~-~~~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l-~~~~~~~~~~~~~~~ 133 (489)
.++..++..+ ...+..+++.+.++|+++|. +|.|+++|++|+++|||+.+|++|+++..+ ..+.
T Consensus 99 ~~~~~~~~~~~~~~~~~v~~~~~~gI~i~D~---~g~I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~----------- 164 (663)
T PRK10060 99 TPSVARDLSHGLSFAEQVVSEANSVIVILDS---RGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRR----------- 164 (663)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCceEEEEeC---CCCEEEEcHHHHHHHCcCHHHHcCCCHHHHhCChh-----------
Confidence 3344444333 34466789999999999999 999999999999999999999999997433 3332
Q ss_pred ccchhHHHHHHHhhhcccccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCC-C
Q 042772 134 STYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKG-E 212 (489)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g-~ 212 (489)
........++..+..+..+.++..+.+|+|+.+|...... +.+..| .
T Consensus 165 -------------------------------~~~~~~~~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~-~~~~~g~~ 212 (663)
T PRK10060 165 -------------------------------EAAASRRNIRGFFRSGNAYEVERWIKTRKGQRLFLFRNKF-VHSGSGKN 212 (663)
T ss_pred -------------------------------hHHHHHHHHHHHHhcCCceEEEEEEEeCCCCEEEEEeeeE-EEcCCCCc
Confidence 2334456677888889999999999999999999876544 444445 4
Q ss_pred eeEEeeeeccCCcccccccc
Q 042772 213 LQYFIGVQLDGSDHVEPLRN 232 (489)
Q Consensus 213 ~~~~~~~~~d~Te~ke~e~~ 232 (489)
..+++++.+|||++++.+++
T Consensus 213 ~~~~i~~~~DITe~k~~e~~ 232 (663)
T PRK10060 213 EIFLICSGTDITEERRAQER 232 (663)
T ss_pred eEEEEEEEEechHHHHHHHH
Confidence 56788999999998876654
No 447
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.19 E-value=7e-12 Score=139.97 Aligned_cols=142 Identities=20% Similarity=0.257 Sum_probs=116.4
Q ss_pred CcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccc-cchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEE
Q 042772 307 HFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVM-LNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLIT 385 (489)
Q Consensus 307 ~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVm 385 (489)
++...+.||++.|=+|.+|++.. |. |++|++-+... .+-....+...|++ ...++|||.+.+.-+..+....|||-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 68888999999999999999875 65 88998865431 11112223333444 66678999999988877888899999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCC
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGl 454 (489)
+|+. -+|++.|..++. +..-+...|+.|++.||..+|..||+|+|||.+||||+.=+-+.|+||..
T Consensus 101 qyvk-hnLyDRlSTRPF--L~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAs 166 (1431)
T KOG1240|consen 101 QYVK-HNLYDRLSTRPF--LVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFAS 166 (1431)
T ss_pred HHHh-hhhhhhhccchH--HHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccc
Confidence 9995 499999988765 77888889999999999999999999999999999999988899999964
No 448
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.18 E-value=7e-11 Score=108.75 Aligned_cols=89 Identities=21% Similarity=0.216 Sum_probs=74.8
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccCC----------
Q 042772 391 GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSC---------- 460 (489)
Q Consensus 391 gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~---------- 460 (489)
|+|.+++.... ..+++..++.++.|++.||.|||+++ ||+|||++.++.+|+ ||++.....
T Consensus 1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~~~y~ 71 (176)
T smart00750 1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVDPYFM 71 (176)
T ss_pred CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccccCCCccccc
Confidence 68999998643 45899999999999999999999999 999999999999999 999864321
Q ss_pred CCc------eeecccccchHHHHHHHHhCCcccC
Q 042772 461 KPQ------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 461 ~~~------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+|+ ....+|+|++|.+++|+++|..||.
T Consensus 72 aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~ 105 (176)
T smart00750 72 APEVIQGQSYTEKADIYSLGITLYEALDYELPYN 105 (176)
T ss_pred ChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCcc
Confidence 122 1234699999999999999999985
No 449
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.16 E-value=4.6e-10 Score=104.17 Aligned_cols=147 Identities=20% Similarity=0.179 Sum_probs=110.1
Q ss_pred cccccCCCCceEEEEEEEcCCCcEEEEEEeecccccc-----hHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEE
Q 042772 310 PIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN-----RNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLI 384 (489)
Q Consensus 310 ~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~-----~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lV 384 (489)
.+..|-+|+-+.|+.+.+. |+.+.||.-....+.. +-..++..+|..+|.++.--.|....-+|.+...-+|+
T Consensus 11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 6778899999999999877 6777777543332222 22356788899999888655665555556677778999
Q ss_pred EecCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC---cEEEEecCCcccc
Q 042772 385 TDFCPG-GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG---HVVLTDFDLSFMT 458 (489)
Q Consensus 385 mEy~~g-gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g---~vKL~DFGlS~~~ 458 (489)
|||++| .++.+++...-...........++.++-..+.-||..+|+|+||..+||++..+| .+.++|||+|...
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 999966 4788888765333333344467788899999999999999999999999997665 3589999998654
No 450
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=99.13 E-value=2.1e-10 Score=130.13 Aligned_cols=133 Identities=17% Similarity=0.258 Sum_probs=110.9
Q ss_pred hhHHHHHHHHHhhhhHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccc-cccchhhhhhccc
Q 042772 54 WDRAERERDIRQGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLE-LTEYTREEILGRN 132 (489)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~-~~~~~~~~~~~~~ 132 (489)
.|++++.+.+++...+..+++.++.+++++|+ ++.|+++|++|++++||+.+|++|+++..+. .+.
T Consensus 123 ~DiT~~~~~~~~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~l~G~~~~e~~g~~~~~~~~~~~---------- 189 (799)
T PRK11359 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDP---ERRIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE---------- 189 (799)
T ss_pred eeccchhhhHHHHHHHHHHHhcCCCcEEEEcC---CCcEEEEChhhHhhhCCCHHHHCCCChHHhcCCCC----------
Confidence 46666666666666677789999999999999 9999999999999999999999999976443 222
Q ss_pred cccchhHHHHHHHhhhcccccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCC
Q 042772 133 CSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGE 212 (489)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~ 212 (489)
........+...+.....+..+....+++|..+|......|+.|.+|.
T Consensus 190 --------------------------------~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~v~d~~g~ 237 (799)
T PRK11359 190 --------------------------------FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 (799)
T ss_pred --------------------------------CcHHHHHHHHHhhccCCCCcceeEEeCCCCCEEEEEeeeeeeecCCCc
Confidence 344455566777777777888888899999999999999999999999
Q ss_pred eeEEeeeeccCCccccccc
Q 042772 213 LQYFIGVQLDGSDHVEPLR 231 (489)
Q Consensus 213 ~~~~~~~~~d~Te~ke~e~ 231 (489)
+.+++++.+|||++++.++
T Consensus 238 ~~~~~~~~~DITerk~~e~ 256 (799)
T PRK11359 238 LQNLVMTFSDITEERQIRQ 256 (799)
T ss_pred eeEEEEEeehhhhHHHHHH
Confidence 9999999999999887653
No 451
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.10 E-value=5.5e-10 Score=106.26 Aligned_cols=142 Identities=18% Similarity=0.264 Sum_probs=104.9
Q ss_pred ccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC--CCcceeeEEEEeC---CeEEEEE
Q 042772 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDH--PFLPTLYASFQTS---THICLIT 385 (489)
Q Consensus 311 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~H--pnIv~l~~~~~~~---~~~~lVm 385 (489)
.+.|+.|.++.||++.... |..+++|........ .....+..|.++++.+.+ .++++++.+.... +..++||
T Consensus 3 ~~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~ 79 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVM 79 (223)
T ss_pred ceecCCCccceEEEEEecC-CcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEE
Confidence 3678999999999998754 678999987654221 123456789999999865 4567777766543 2578999
Q ss_pred ecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH---------------------------------------
Q 042772 386 DFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC--------------------------------------- 426 (489)
Q Consensus 386 Ey~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~--------------------------------------- 426 (489)
||++|.++.+.+.. ..+++.....++.+++.+|..||+
T Consensus 80 e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (223)
T cd05154 80 ERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPA 156 (223)
T ss_pred EEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHH
Confidence 99999888765532 125666666677777777777773
Q ss_pred -----------------CCCeecCCCCCCEEEec--CCcEEEEecCCcccc
Q 042772 427 -----------------LGIIYRDLKPENILLQK--DGHVVLTDFDLSFMT 458 (489)
Q Consensus 427 -----------------~gIvHrDLKP~NILld~--~g~vKL~DFGlS~~~ 458 (489)
..++|+|++|.||+++. ++.+.|+||+.+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g 207 (223)
T cd05154 157 MERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG 207 (223)
T ss_pred HHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence 23699999999999998 667899999988643
No 452
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.10 E-value=3.6e-10 Score=132.65 Aligned_cols=138 Identities=19% Similarity=0.195 Sum_probs=107.9
Q ss_pred chhHHHHHHHHHhh----hhHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhh
Q 042772 53 SWDRAERERDIRQG----IDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEI 128 (489)
Q Consensus 53 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~ 128 (489)
..|+++|++.+++. ..+..+++.++++++++|. ++.|+++|++|++++||+.+|++|+++..+.....
T Consensus 518 ~~DITerk~~e~~L~~~~~~l~~~l~~~~~~i~~~D~---~g~i~~~N~a~~~l~G~~~~e~iG~~~~~~~~~~~----- 589 (1092)
T PRK09776 518 NMDMTEVRQLNEALFQEKERLHITLDSIGEAVVCTDM---AMKVTFMNPVAEKMTGWTQEEALGVPLLTVLHITF----- 589 (1092)
T ss_pred eeehhHHHHHHHHHHHHHHHHHHHHhccccEEEEECC---CCeEEEEcHHHHHHhCCCHHHHcCCCHHHHccccc-----
Confidence 35788887766543 3477889999999999999 99999999999999999999999998754432110
Q ss_pred hccccccchhHHHHHHHhhhcccccccccCcccccCCCHHHHHHHHHHHHcCCc--EEEEEEeeecCCCeeeEEEeeccc
Q 042772 129 LGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQRE--ITVQLINYTKSGKKFWNLFHLQPM 206 (489)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~k~g~~~~~~~~~~p~ 206 (489)
..+......+.......+. +..+....++||..+|...+++|+
T Consensus 590 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~pi 634 (1092)
T PRK09776 590 -----------------------------------GDNGPLMENIYSCLTSRSAAYLEQDVVLHCRSGGSYDVHYSITPL 634 (1092)
T ss_pred -----------------------------------CCcchhhHHHHHHHhcCCCccccceEEEEeCCCcEEEEEEEeeee
Confidence 0122222335555555544 556667789999999999999999
Q ss_pred ccCCCCeeEEeeeeccCCccccccccc
Q 042772 207 RDHKGELQYFIGVQLDGSDHVEPLRNR 233 (489)
Q Consensus 207 ~~~~g~~~~~~~~~~d~Te~ke~e~~~ 233 (489)
+|.+|++.+++++.+|||++++.+++.
T Consensus 635 ~~~~g~~~g~v~~~~DITe~k~~e~~L 661 (1092)
T PRK09776 635 STLDGENIGSVLVIQDVTESRKMLRQL 661 (1092)
T ss_pred ecCCCCEEEEEEEEEecchHHHHHHHH
Confidence 999999999999999999999877553
No 453
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.06 E-value=5.1e-10 Score=131.36 Aligned_cols=125 Identities=14% Similarity=0.273 Sum_probs=101.1
Q ss_pred hhhhHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHH
Q 042772 65 QGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLA 144 (489)
Q Consensus 65 ~~~~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (489)
....+..+++.++.+++++|+ +|.|+++|++|++++||+++|++|++...+..++
T Consensus 281 ~e~r~~~l~e~~~~~i~~~d~---dG~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~---------------------- 335 (1092)
T PRK09776 281 SETRFRNAMEYSAIGMALVGT---EGQWLQVNKALCQFLGYSQEELRGLTFQQLTWPE---------------------- 335 (1092)
T ss_pred HHHHHHHHHHhCCceEEEEcC---CCcEEehhHHHHHHhCCCHHHHccCCceeccCcc----------------------
Confidence 345578899999999999999 9999999999999999999999999877665543
Q ss_pred HhhhcccccccccCcccccCCCHHHHHHHHHHHHcC-CcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccC
Q 042772 145 LWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQ-REITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDG 223 (489)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~ 223 (489)
........+....... ..+..+....+|||+.+|..++.+|++|.+|.+.+++++.+||
T Consensus 336 --------------------d~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~g~~~~~i~~~~DI 395 (1092)
T PRK09776 336 --------------------DLNKDLQQVEKLLSGEINSYSMEKRYYRRDGEVVWALLAVSLVRDTDGTPLYFIAQIEDI 395 (1092)
T ss_pred --------------------hhHhHHHHHHHHHcCCccceeeeeEEEcCCCCEEEEEEEEEEEECCCCCEeeehhhHHhh
Confidence 1122223333333322 3467888889999999999999999999999999999999999
Q ss_pred Ccccccccccc
Q 042772 224 SDHVEPLRNRL 234 (489)
Q Consensus 224 Te~ke~e~~~l 234 (489)
|++++++++..
T Consensus 396 Terk~~e~~l~ 406 (1092)
T PRK09776 396 NELKRTEQVNE 406 (1092)
T ss_pred HHHHHHHHHHH
Confidence 99998776543
No 454
>TIGR00229 sensory_box PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator.
Probab=99.06 E-value=1.4e-09 Score=87.18 Aligned_cols=117 Identities=19% Similarity=0.345 Sum_probs=89.5
Q ss_pred HHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHhhh
Q 042772 69 LATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALWKK 148 (489)
Q Consensus 69 ~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (489)
+..+++.++.+++++|+ ++.|+++|++|.+++|++.++++|+++..+..+.
T Consensus 5 ~~~~~~~~~~~~~~~d~---~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~-------------------------- 55 (124)
T TIGR00229 5 YRAIFESSPDAIIVIDL---EGNILYVNPAFEEIFGYSAEELIGRNVLELIPEE-------------------------- 55 (124)
T ss_pred HHHHHhhCCceEEEEcC---CCcEEEEchHHHHHhCCChHHhcCcchhhhcChh--------------------------
Confidence 56788999999999999 9999999999999999999999998876543332
Q ss_pred cccccccccCcccccCCCHHHHHHHHHHHHcC-CcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCCccc
Q 042772 149 NYGVYNFTLGCCLEISSDQATVSKIRDAVREQ-REITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHV 227 (489)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~Te~k 227 (489)
........+..++... .....+.....++|...|......|+. ..|...+++++..|+|+++
T Consensus 56 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~ 118 (124)
T TIGR00229 56 ----------------DREEVRERIERLLEGEREPVSEERRVRRKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERK 118 (124)
T ss_pred ----------------hhHHHHHHHHHHHcCCCCCcceEeeeEcCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHH
Confidence 1222233344555423 223334444589999999999999998 7889999999999999987
Q ss_pred cccc
Q 042772 228 EPLR 231 (489)
Q Consensus 228 e~e~ 231 (489)
+.++
T Consensus 119 ~~~~ 122 (124)
T TIGR00229 119 QAEE 122 (124)
T ss_pred HHHh
Confidence 6543
No 455
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.99 E-value=1e-08 Score=102.31 Aligned_cols=135 Identities=19% Similarity=0.062 Sum_probs=93.6
Q ss_pred EEEEEEEcCCCcEEEEEEeecccccc--------hHHHHHHHHHHHHHHhCCCCCc--ceeeEEEEe-----CCeEEEEE
Q 042772 321 SVHLVELQGAGELYAMKAMEKSVMLN--------RNKVHRACIEREIMSLLDHPFL--PTLYASFQT-----STHICLIT 385 (489)
Q Consensus 321 ~Vy~a~~~~tg~~vAiK~i~~~~~~~--------~~~~~~~~~E~~il~~l~HpnI--v~l~~~~~~-----~~~~~lVm 385 (489)
.|..++.. |+.|.+|......... ......+.+|...+..|..-+| +.++++... ....++||
T Consensus 37 rvvr~~~~--g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 37 RTLRFELA--GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred eEEEEEEC--CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 45566553 6788999664321100 0011136678888877743333 233444432 23578999
Q ss_pred ecCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEec-------CCcEEEEecCCccc
Q 042772 386 DFCPGG-ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQK-------DGHVVLTDFDLSFM 457 (489)
Q Consensus 386 Ey~~gg-sL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~-------~g~vKL~DFGlS~~ 457 (489)
|++++. +|.+++........+......++.+++..+.-||..||+|+|+++.|||++. ++.+.|+||+.+..
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 999875 8999886432233566777889999999999999999999999999999985 46899999999864
No 456
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.98 E-value=3.9e-11 Score=131.99 Aligned_cols=152 Identities=24% Similarity=0.331 Sum_probs=122.8
Q ss_pred cCcccccccCCCCceEEEEEEEcC-CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCCeEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQG-AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTSTHICL 383 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~-tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~l 383 (489)
..|.+.+.||+|+|+.|-+..... +...+|.|.+.... ...........|..+-+.+. |+|++++++........++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 358888899999999999988743 34566666665432 22333444555777777776 9999999999999999999
Q ss_pred EEecCCCCCHHHHH-hhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCCEEEecCC-cEEEEecCCccccC
Q 042772 384 ITDFCPGGELFALL-DKQPMKIFREDSARFYAAEVVIGLEYLH-CLGIIYRDLKPENILLQKDG-HVVLTDFDLSFMTS 459 (489)
Q Consensus 384 VmEy~~ggsL~~~L-~~~~~~~l~e~~~~~i~~qI~~aL~yLH-~~gIvHrDLKP~NILld~~g-~vKL~DFGlS~~~~ 459 (489)
+++|..|++++..+ .... ...+...+..++.|+..++.|+| ..++.|||+||+|.+++..+ .+++.|||+|....
T Consensus 99 ~~~~s~g~~~f~~i~~~~~-~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDS-TGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYR 176 (601)
T ss_pred ccCcccccccccccccCCc-cCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcccc
Confidence 99999999999988 4432 13677888899999999999999 99999999999999999999 99999999996443
No 457
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.96 E-value=2.3e-09 Score=115.57 Aligned_cols=165 Identities=12% Similarity=0.142 Sum_probs=127.0
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEEEEEec
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDF 387 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lVmEy 387 (489)
|.+ ....-++.+....|..+.++..|.+...+.+.. .......+-.+-|+.++||||+++++.+..++.+|||+|-
T Consensus 15 Y~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTEr 90 (690)
T KOG1243|consen 15 YDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTER 90 (690)
T ss_pred ccc-ccccCCCcccccccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeec
Confidence 555 444445554443567777888999998876532 3345566677789999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCCEEEecCCcEEEEecCCccccCCC-----
Q 042772 388 CPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLH-CLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSCK----- 461 (489)
Q Consensus 388 ~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH-~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~~~----- 461 (489)
+ ..|..++++. ....+..-+.||+.||.||| +.+++|++|.-.-|+++..|..||++|-++......
T Consensus 91 V--~Pl~~~lk~l-----~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~ 163 (690)
T KOG1243|consen 91 V--RPLETVLKEL-----GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAK 163 (690)
T ss_pred c--ccHHHHHHHh-----HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccc
Confidence 8 4888888874 46777788899999999998 668999999999999999999999999887543321
Q ss_pred ----------Cceeecc----cccchHHHHHHHHhC
Q 042772 462 ----------PQVFYHA----HVNGFYFIMYKWLTG 483 (489)
Q Consensus 462 ----------~~~~~~~----~v~s~g~~a~e~~~G 483 (489)
|....++ |.|++|....+...|
T Consensus 164 ~~~~~~s~~~P~~~~~s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 164 SLYLIESFDDPEEIDPSEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cchhhhcccChhhcCccccchhhhhHHHHHHHHhCc
Confidence 2222223 677778888877777
No 458
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.92 E-value=8e-09 Score=97.65 Aligned_cols=128 Identities=22% Similarity=0.178 Sum_probs=82.5
Q ss_pred EEEEEEcCCCcEEEEEEeecccccc-----------------------hHHHHHHHHHHHHHHhCCCC--CcceeeEEEE
Q 042772 322 VHLVELQGAGELYAMKAMEKSVMLN-----------------------RNKVHRACIEREIMSLLDHP--FLPTLYASFQ 376 (489)
Q Consensus 322 Vy~a~~~~tg~~vAiK~i~~~~~~~-----------------------~~~~~~~~~E~~il~~l~Hp--nIv~l~~~~~ 376 (489)
||.|... .|..+|+|......... .........|...|.++..- ++++++++.
T Consensus 2 Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 2 VYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred EEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 7888875 47899999885422111 01134567799999999755 577777542
Q ss_pred eCCeEEEEEecCC--CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH-HHHCCCeecCCCCCCEEEecCCcEEEEecC
Q 042772 377 TSTHICLITDFCP--GGELFALLDKQPMKIFREDSARFYAAEVVIGLEY-LHCLGIIYRDLKPENILLQKDGHVVLTDFD 453 (489)
Q Consensus 377 ~~~~~~lVmEy~~--ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~y-LH~~gIvHrDLKP~NILld~~g~vKL~DFG 453 (489)
..+|||||++ |..+..+.... ++......++.+++..+.. +|+.||+|+||.+.|||++++ .+.|+|||
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~ 151 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFG 151 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GT
T ss_pred ---CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecC
Confidence 2479999998 65565544322 1234455667778875555 579999999999999999877 89999999
Q ss_pred CccccC
Q 042772 454 LSFMTS 459 (489)
Q Consensus 454 lS~~~~ 459 (489)
.|....
T Consensus 152 qav~~~ 157 (188)
T PF01163_consen 152 QAVDSS 157 (188)
T ss_dssp TEEETT
T ss_pred cceecC
Confidence 987655
No 459
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=98.90 E-value=6e-09 Score=85.30 Aligned_cols=85 Identities=26% Similarity=0.379 Sum_probs=65.7
Q ss_pred EEEecHhhHHhcCCChhhhcCCC----ccccccccchhhhhhccccccchhHHHHHHHhhhcccccccccCcccccCCCH
Q 042772 92 IIFASDSFLELTEYTREEILGRN----CSFLELTEYTREEILGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQ 167 (489)
Q Consensus 92 i~~~n~~~~~~~gy~~~e~~g~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (489)
|+|+|++|++++||+++|+ |.. ..-+..|+ ...
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpd------------------------------------------D~~ 37 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPD------------------------------------------DRE 37 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TT------------------------------------------THH
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHH------------------------------------------HHH
Confidence 7899999999999999999 655 22122232 344
Q ss_pred HHHHHHHH-HHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeee
Q 042772 168 ATVSKIRD-AVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGV 219 (489)
Q Consensus 168 ~~~~~~~~-~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~ 219 (489)
...+.+++ +...+..++.++...++||+..|+.....|++|.+|+++.++|+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d~~g~~~~~~Gv 90 (91)
T PF08447_consen 38 RVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFDENGKPIRIIGV 90 (91)
T ss_dssp HHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEETTTS-EEEEEEE
T ss_pred HHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEE
Confidence 45566777 67888899999999999999999999999999999999999987
No 460
>PRK13560 hypothetical protein; Provisional
Probab=98.89 E-value=5.7e-09 Score=118.02 Aligned_cols=152 Identities=12% Similarity=0.148 Sum_probs=107.6
Q ss_pred chhHHHHHHHHHhhh----hHHHHHHhccCcEEEECCCCCCCCEEEe-cHhhHHhcCCChhhhcCCCccccccccchhhh
Q 042772 53 SWDRAERERDIRQGI----DLATTLERIEKNFVITDPRIPDNPIIFA-SDSFLELTEYTREEILGRNCSFLELTEYTREE 127 (489)
Q Consensus 53 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~d~~~~~~~i~~~-n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~ 127 (489)
..|+++|++.+++.. .+..+++.++.+++++|+ ++.|+++ |+++++++||+.+|++|++...+....
T Consensus 314 ~~DITerk~~e~~L~~se~~l~~l~~~~~~~i~~~d~---~g~i~~~nn~~~~~~~G~~~~e~~g~~~~~~~~~~----- 385 (807)
T PRK13560 314 ITDISGRRAAERELLEKEDMLRAIIEAAPIAAIGLDA---DGNICFVNNNAAERMLGWSAAEVMGKPLPGMDPEL----- 385 (807)
T ss_pred EEechHHHHHHHHHHHHHHHHHHHHHhCcccEEEEcC---CCCEEEecCHHHHHHhCCCHHHHcCCCccccChhh-----
Confidence 358888887766543 477889999999999999 9999987 678888999999999999865433221
Q ss_pred hhccccccchhHHHHHHHhhhcccccccccCcccccCCCHH--HHHHHHHHHHcCCcEE-EEEEeeecCCCeeeEEEeec
Q 042772 128 ILGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQA--TVSKIRDAVREQREIT-VQLINYTKSGKKFWNLFHLQ 204 (489)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~k~g~~~~~~~~~~ 204 (489)
...+|...+..|. +..... ....+...+..++.+. .++...+++|..+|+.....
T Consensus 386 --------------~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~ 443 (807)
T PRK13560 386 --------------NEEFWCGDFQEWY--------PDGRPMAFDACPMAKTIKGGKIFDGQEVLIEREDDGPADCSAYAE 443 (807)
T ss_pred --------------hhhhhhchhhhcC--------CcCCcchhhhhhHHHHHhcCCcccCceEEEEcCCCCeEEEEEEEe
Confidence 0011211111110 000000 1112344455565543 46677899999999999999
Q ss_pred ccccCCCCeeEEeeeeccCCcccccccccc
Q 042772 205 PMRDHKGELQYFIGVQLDGSDHVEPLRNRL 234 (489)
Q Consensus 205 p~~~~~g~~~~~~~~~~d~Te~ke~e~~~l 234 (489)
|++|.+|.+.+++++..|||++|+++++..
T Consensus 444 p~~d~~g~~~~~~~~~~DITerk~~E~~L~ 473 (807)
T PRK13560 444 PLHDADGNIIGAIALLVDITERKQVEEQLL 473 (807)
T ss_pred eeECCCCCEEEEEEEeehhhhHHHHHHHHH
Confidence 999999999999999999999998876654
No 461
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=98.88 E-value=4.6e-09 Score=111.67 Aligned_cols=128 Identities=23% Similarity=0.347 Sum_probs=108.2
Q ss_pred HHhCCCCCcceeeEEEEeCCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-eecCCCCCC
Q 042772 360 MSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGI-IYRDLKPEN 438 (489)
Q Consensus 360 l~~l~HpnIv~l~~~~~~~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gI-vHrDLKP~N 438 (489)
|+.+.|.|+.++++.+..+...++|.+||+.|+|.+.+..... .++..-...++.+++.||.|+|.--| .|+.|++.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~-~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDI-KLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcccc-CccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 3567899999999999999999999999999999999987533 37788888899999999999997655 999999999
Q ss_pred EEEecCCcEEEEecCCccccC-----------------CCCc-------------eeecccccchHHHHHHHHhCCcccC
Q 042772 439 ILLQKDGHVVLTDFDLSFMTS-----------------CKPQ-------------VFYHAHVNGFYFIMYKWLTGYFTYV 488 (489)
Q Consensus 439 ILld~~g~vKL~DFGlS~~~~-----------------~~~~-------------~~~~~~v~s~g~~a~e~~~G~lpY~ 488 (489)
+++|....+||+|||+..... .+|+ .....|++++|.+++|+++-.-||.
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~ 159 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD 159 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence 999999999999999986652 1111 1233588999999999999888885
No 462
>cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Probab=98.83 E-value=8.8e-08 Score=72.75 Aligned_cols=102 Identities=25% Similarity=0.417 Sum_probs=82.1
Q ss_pred cCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHhhhcccccccc
Q 042772 77 EKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALWKKNYGVYNFT 156 (489)
Q Consensus 77 ~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (489)
+.++++.|. ++.++++|++|.+++||+.++++|++...+..+.
T Consensus 2 ~~~i~~~d~---~~~~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~---------------------------------- 44 (103)
T cd00130 2 PDGVIVLDL---DGRILYANPAAEQLLGYSPEELIGKSLLDLIHPE---------------------------------- 44 (103)
T ss_pred CceEEEECC---CCcEEEECHHHHHHhCCCHHHHcCccHHHhcCCc----------------------------------
Confidence 467899999 9999999999999999999999998865443332
Q ss_pred cCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccC
Q 042772 157 LGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDG 223 (489)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~ 223 (489)
........+..+.........++....++|...|......|+.+..|....++++..||
T Consensus 45 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 45 --------DREELRERLENLLSGGEPVTLEVRLRRKDGSVIWVLVSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred --------cchHHHHHHHHHHhcCcCeEEEEEEEccCCCEEEEEEEEEEEecCCCCEEEEEEEEecC
Confidence 22234445566666566677788888889999999999999999989999999888875
No 463
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional
Probab=98.78 E-value=2.7e-08 Score=101.66 Aligned_cols=115 Identities=11% Similarity=0.132 Sum_probs=90.6
Q ss_pred hhHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHh
Q 042772 67 IDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALW 146 (489)
Q Consensus 67 ~~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (489)
..+.++++.+++++++.|+ ++.|+++|++|++++||+.++++|+++..+....
T Consensus 7 ~~~~~il~~~~~gi~~~d~---~~~i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~------------------------ 59 (348)
T PRK11073 7 PDAGQILNSLINSILLLDD---DLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYF------------------------ 59 (348)
T ss_pred chHHHHHhcCcCeEEEECC---CCeEeeEcHHHHHHhCCCHHHHcCCCHHHHcCcc------------------------
Confidence 3578899999999999999 9999999999999999999999999987664221
Q ss_pred hhcccccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCCcc
Q 042772 147 KKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDH 226 (489)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~Te~ 226 (489)
......+.+++..++.++..-..+.++|+++|..++.+|+.+ .+++...+|+|++
T Consensus 60 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~dit~~ 114 (348)
T PRK11073 60 --------------------SLNIELMRESLQAGQGFTDNEVTLVIDGRSHILSLTAQRLPE-----GMILLEMAPMDNQ 114 (348)
T ss_pred --------------------hhhHHHHHHHHHcCCcccccceEEEECCceEEEEEEEEEccC-----ceeEEEEechhHH
Confidence 112234556676766666556667889999999999999972 3466778999988
Q ss_pred ccccccc
Q 042772 227 VEPLRNR 233 (489)
Q Consensus 227 ke~e~~~ 233 (489)
++.+++.
T Consensus 115 ~~~~~~~ 121 (348)
T PRK11073 115 RRLSQEQ 121 (348)
T ss_pred HHHHHHH
Confidence 7765544
No 464
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.78 E-value=5.3e-09 Score=111.53 Aligned_cols=153 Identities=21% Similarity=0.244 Sum_probs=124.5
Q ss_pred ccccccCcccccccCCCCceEEEEEEEc-CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceeeEEEEeC
Q 042772 301 EKIGLHHFKPIKPLGCGDTGSVHLVELQ-GAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLL-DHPFLPTLYASFQTS 378 (489)
Q Consensus 301 ~~i~~~~y~~~~~LG~G~fG~Vy~a~~~-~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~ 378 (489)
....+.+|..+..||.|.|+.|+.+... .++..|++|.+.+.......++.. ..|+.+...+ .|.+++.++..|..-
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~s-l~ev~l~~~l~~~~~~~g~~~~W~~~ 338 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFS-LGEVILEAILGSHLPSVGKNSSWSQL 338 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcc-hhhhhHhhHhhcccccCCCCCCcccc
Confidence 4556788999999999999999998866 678899999887765554443322 3355555555 589999988888888
Q ss_pred CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecC-CcEEEEecCCcc
Q 042772 379 THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD-GHVVLTDFDLSF 456 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~-g~vKL~DFGlS~ 456 (489)
.+.|+-.|||.++++.....-. ..+++...+.+..|++.++.++|++.++|+|+||+||++..+ +..++.|||+..
T Consensus 339 r~~~ip~e~~~~~s~~l~~~~~--~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 339 RQGYIPLEFCEGGSSSLRSVTS--QMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred ccccCchhhhcCcchhhhhHHH--HhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccc
Confidence 8889999999999887666332 337888899999999999999999999999999999999876 778999999874
No 465
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.72 E-value=1.5e-07 Score=99.19 Aligned_cols=164 Identities=15% Similarity=0.180 Sum_probs=124.3
Q ss_pred CceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEe----CCeEEEEEecCCC-CC
Q 042772 318 DTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQT----STHICLITDFCPG-GE 392 (489)
Q Consensus 318 ~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~----~~~~~lVmEy~~g-gs 392 (489)
.-.+.|++....+|..|++|.++-......+ ....-.++++++.|+|||.+.++|.+ +..+++|++|.|+ ++
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n---k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTN---KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT 364 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcc---cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence 4468999999999999999999433222221 12234668999999999999999873 4579999999975 57
Q ss_pred HHHHHhhC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 393 LFALLDKQ-------------PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 393 L~~~L~~~-------------~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
|.++--.. .+...+|..+|.++.|+..||.++|+.|+..+-|.|.+||++.+.+++|.--|+.-++.
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeec
Confidence 77664221 12236789999999999999999999999999999999999988889998888776665
Q ss_pred CCC-ce---eecccccchHHHHHHHHhCC
Q 042772 460 CKP-QV---FYHAHVNGFYFIMYKWLTGY 484 (489)
Q Consensus 460 ~~~-~~---~~~~~v~s~g~~a~e~~~G~ 484 (489)
..+ .. ....|..-+|..+--+++|+
T Consensus 445 ~d~~~~le~~Qq~D~~~lG~ll~aLAt~~ 473 (655)
T KOG3741|consen 445 EDPTEPLESQQQNDLRDLGLLLLALATGT 473 (655)
T ss_pred CCCCcchhHHhhhhHHHHHHHHHHHhhcc
Confidence 554 11 12335556788877777774
No 466
>PRK11360 sensory histidine kinase AtoS; Provisional
Probab=98.69 E-value=1.7e-07 Score=101.61 Aligned_cols=119 Identities=15% Similarity=0.089 Sum_probs=93.6
Q ss_pred hHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHhh
Q 042772 68 DLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALWK 147 (489)
Q Consensus 68 ~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (489)
.+..+++.++++++++|. ++.|+++|++|++++||++++++|+++..+..+.
T Consensus 263 ~~~~i~~~~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~------------------------- 314 (607)
T PRK11360 263 LNELILESIADGVIAIDR---QGKITTMNPAAEVITGLQRHELVGKPYSELFPPN------------------------- 314 (607)
T ss_pred HHHHHHHhccCeEEEEcC---CCCEEEECHHHHHHhCCChHHhcCCcHHHHcCCc-------------------------
Confidence 456788999999999999 9999999999999999999999999977654321
Q ss_pred hcccccccccCcccccCCCHHHHHHHHHHHHcCCcEE-EEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCCcc
Q 042772 148 KNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREIT-VQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDH 226 (489)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~Te~ 226 (489)
......+.+.+..+.... .++...+++|..+ +.++..|++|.+|++.+++++..|+|++
T Consensus 315 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~ 374 (607)
T PRK11360 315 -------------------TPFASPLLDTLEHGTEHVDLEISFPGRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTER 374 (607)
T ss_pred -------------------hhHHHHHHHHHhcCCCccceEEEEEcCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHH
Confidence 222334555555555443 3444556677665 8999999999999999999999999999
Q ss_pred cccccccc
Q 042772 227 VEPLRNRL 234 (489)
Q Consensus 227 ke~e~~~l 234 (489)
++.+++..
T Consensus 375 ~~~e~~l~ 382 (607)
T PRK11360 375 KRLQRRVA 382 (607)
T ss_pred HHHHHHHH
Confidence 98776543
No 467
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.67 E-value=2.3e-07 Score=88.84 Aligned_cols=108 Identities=27% Similarity=0.260 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHhCCCC--CcceeeEEEEeC----CeEEEEEecCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHH
Q 042772 350 VHRACIEREIMSLLDHP--FLPTLYASFQTS----THICLITDFCPGG-ELFALLDKQPMKIFREDSARFYAAEVVIGLE 422 (489)
Q Consensus 350 ~~~~~~E~~il~~l~Hp--nIv~l~~~~~~~----~~~~lVmEy~~gg-sL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~ 422 (489)
..+..+|...+..|..- .++.++++.... ...++|||++++. +|.+++..... .+......++.+++..+.
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHH
Confidence 34566787777766432 344555554432 2468999999874 89999887432 566777888999999999
Q ss_pred HHHHCCCeecCCCCCCEEEecCC---cEEEEecCCccccC
Q 042772 423 YLHCLGIIYRDLKPENILLQKDG---HVVLTDFDLSFMTS 459 (489)
Q Consensus 423 yLH~~gIvHrDLKP~NILld~~g---~vKL~DFGlS~~~~ 459 (489)
-||..||+|+|++|.|||++.++ .+.++||+-++...
T Consensus 133 ~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 133 KLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 99999999999999999999887 89999999887654
No 468
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=98.66 E-value=7.3e-08 Score=109.52 Aligned_cols=116 Identities=22% Similarity=0.357 Sum_probs=87.1
Q ss_pred HHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHhhh
Q 042772 69 LATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALWKK 148 (489)
Q Consensus 69 ~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (489)
+..+++..+.+++++|. ++.|+++|++|++++||+++|++|++...+..+.
T Consensus 14 ~~~~le~~~~~i~~~d~---~g~i~~~N~~~~~l~G~s~eeliG~~~~~~~~~~-------------------------- 64 (799)
T PRK11359 14 FFPALEQNMMGAVLINE---NDEVLFFNPAAEKLWGYKREEVIGNNIDMLIPRD-------------------------- 64 (799)
T ss_pred HHHHHHhhcCcEEEEcC---CCeEEEEcHHHHHHhCCCHHHHcCCCHHHhcCcc--------------------------
Confidence 46788999999999999 9999999999999999999999999987665443
Q ss_pred cccccccccCcccccCCCHHHHHHHHHHHHc----CCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCC
Q 042772 149 NYGVYNFTLGCCLEISSDQATVSKIRDAVRE----QREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGS 224 (489)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~T 224 (489)
........++..... ...+..++..+++||+.+|..+.+.|+. ..|. .+++++.+|+|
T Consensus 65 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~v~~~~~~~~-~~g~-~~~~~~~~DiT 126 (799)
T PRK11359 65 ----------------LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS-AEGK-VYYLALVRDAS 126 (799)
T ss_pred ----------------ccccchHHHhhhhccCCccccccceeeEEecCCcCEEEEEEEeeeec-cCCc-eEEEEEEeecc
Confidence 111111222222222 2234557888999999999999999874 4455 56889999999
Q ss_pred ccccccc
Q 042772 225 DHVEPLR 231 (489)
Q Consensus 225 e~ke~e~ 231 (489)
++++.++
T Consensus 127 ~~~~~~~ 133 (799)
T PRK11359 127 VEMAQKE 133 (799)
T ss_pred chhhhHH
Confidence 9776543
No 469
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.66 E-value=6.7e-08 Score=104.29 Aligned_cols=149 Identities=22% Similarity=0.273 Sum_probs=97.6
Q ss_pred ccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccc---------------------------hHHH----HH-
Q 042772 305 LHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN---------------------------RNKV----HR- 352 (489)
Q Consensus 305 ~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~---------------------------~~~~----~~- 352 (489)
...|.. ++|+.++-|+||.|..+. |+.||||+..+..... ...+ +.
T Consensus 125 F~eF~~-~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l 202 (517)
T COG0661 125 FSEFEP-EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRL 202 (517)
T ss_pred HHHcCC-CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHH
Confidence 444544 789999999999999986 9999999986643210 0001 11
Q ss_pred -----HHHHHHHHHhC-----CCCCcceeeEEEEeCCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHH-H
Q 042772 353 -----ACIEREIMSLL-----DHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIG-L 421 (489)
Q Consensus 353 -----~~~E~~il~~l-----~HpnIv~l~~~~~~~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~a-L 421 (489)
+.+|..-+.++ +.|++.-..=+++..+.-.|+|||++|..+.+...-.. ..++...+... ++.+ +
T Consensus 203 ~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~---~~~~f~ 278 (517)
T COG0661 203 REELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAEL---LVRAFL 278 (517)
T ss_pred HHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHH---HHHHHH
Confidence 22333333333 24554433334454566789999999999988743221 22443333322 2222 3
Q ss_pred HHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccccC
Q 042772 422 EYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 422 ~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~~~ 459 (489)
..+-..|++|.|..|.||+++.+|.+.+.|||+....+
T Consensus 279 ~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 279 RQLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred HHHHhcCccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 34445899999999999999999999999999986554
No 470
>PRK09902 hypothetical protein; Provisional
Probab=98.63 E-value=5.8e-07 Score=86.19 Aligned_cols=141 Identities=13% Similarity=0.146 Sum_probs=102.3
Q ss_pred CCCCceEEEEEEEcCCCcEEEEEEeecccc---cchHHHHHHHHHHHHHHhCCCC--CcceeeEEEEe----CCeEEEEE
Q 042772 315 GCGDTGSVHLVELQGAGELYAMKAMEKSVM---LNRNKVHRACIEREIMSLLDHP--FLPTLYASFQT----STHICLIT 385 (489)
Q Consensus 315 G~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~~~~E~~il~~l~Hp--nIv~l~~~~~~----~~~~~lVm 385 (489)
|+|+-+.|+.....+ +.+=+|....... ..+.....+.+|...+..|..- .++.+...-.. .-..+||+
T Consensus 27 ~rgG~SgV~r~~~~g--~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERNG--KKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeCC--cEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 568888899877664 3577776642111 1133557788999999888532 24555422111 12578999
Q ss_pred ecCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc--EEEEecCCccc
Q 042772 386 DFCPG-GELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGH--VVLTDFDLSFM 457 (489)
Q Consensus 386 Ey~~g-gsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~--vKL~DFGlS~~ 457 (489)
|-++| -+|.+++........++.....++.+++..+.-||+.|+.|+|+-+.||+++.+|. ++++||--++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 98853 58988887654444577777889999999999999999999999999999987777 99999988763
No 471
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154).
Probab=98.62 E-value=8.7e-08 Score=96.09 Aligned_cols=106 Identities=11% Similarity=0.035 Sum_probs=80.4
Q ss_pred hhHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHh
Q 042772 67 IDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALW 146 (489)
Q Consensus 67 ~~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (489)
..+..+++.+++++++.|+ ++.|+|+|++|++++||+++|++|+++..+..+
T Consensus 6 ~~l~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~------------------------- 57 (333)
T TIGR02966 6 SRFRAAAQALPDAVVVLDE---EGQIEWCNPAAERLLGLRWPDDLGQRITNLIRH------------------------- 57 (333)
T ss_pred HHHHHHHHhCcCcEEEECC---CCcEEEEcHHHHHHhCCChHHHcCCcHHHHccC-------------------------
Confidence 4478999999999999999 999999999999999999999999987644322
Q ss_pred hhcccccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCCcc
Q 042772 147 KKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDH 226 (489)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~Te~ 226 (489)
......+..... ..+ +....++|...|+.+.++|+.+.. ++++..|+|+.
T Consensus 58 --------------------~~~~~~l~~~~~-~~~----~~~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~dit~~ 107 (333)
T TIGR02966 58 --------------------PEFVEYLAAGRF-SEP----LELPSPINSERVLEIRIAPYGEEQ-----KLLVARDVTRL 107 (333)
T ss_pred --------------------HHHHHHHHhccc-CCC----eEeecCCCCceEEEEEEEEcCCCc-----eEEEEeCchHH
Confidence 222222222221 222 333358999999999999998753 77889999987
Q ss_pred cccc
Q 042772 227 VEPL 230 (489)
Q Consensus 227 ke~e 230 (489)
++.+
T Consensus 108 ~~~~ 111 (333)
T TIGR02966 108 RRLE 111 (333)
T ss_pred HHHH
Confidence 7654
No 472
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.59 E-value=4.1e-07 Score=89.62 Aligned_cols=139 Identities=21% Similarity=0.204 Sum_probs=99.1
Q ss_pred cccccccCCCCceEEEEEEEcCCCcEEEEEEeeccccc------chH-------------HHHHHHHHHHHHHhCCCC--
Q 042772 308 FKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVML------NRN-------------KVHRACIEREIMSLLDHP-- 366 (489)
Q Consensus 308 y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~------~~~-------------~~~~~~~E~~il~~l~Hp-- 366 (489)
..+...||-|--+.||.|.+. .|..+|+|.-...... .+. ......+|.++|.+|..-
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 456688999999999999987 4889999954321110 011 123456788899988643
Q ss_pred CcceeeEEEEeCCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCc
Q 042772 367 FLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGH 446 (489)
Q Consensus 367 nIv~l~~~~~~~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~ 446 (489)
.|++.+++ +...+||||++|-.|...- ++......++..|+.-+.-+-..|+||+|+.+-||+++++|.
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD 240 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC
Confidence 78888764 4678999999887765432 122333344445555555555899999999999999999999
Q ss_pred EEEEecCCcccc
Q 042772 447 VVLTDFDLSFMT 458 (489)
Q Consensus 447 vKL~DFGlS~~~ 458 (489)
+.++||--+...
T Consensus 241 ~~vIDwPQ~v~~ 252 (304)
T COG0478 241 IVVIDWPQAVPI 252 (304)
T ss_pred EEEEeCcccccC
Confidence 999999766543
No 473
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.55 E-value=4.2e-08 Score=104.78 Aligned_cols=151 Identities=23% Similarity=0.240 Sum_probs=120.7
Q ss_pred cCcccccccCC--CCceEEEEEEE--cCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCCe
Q 042772 306 HHFKPIKPLGC--GDTGSVHLVEL--QGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTSTH 380 (489)
Q Consensus 306 ~~y~~~~~LG~--G~fG~Vy~a~~--~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~ 380 (489)
..|.+...+|. |.+|.||.+.. ..++..+|+|.-+... .....-.+-.+|...-++++ |+|.++.+..+...+.
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~-s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~ 192 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPF-SPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGI 192 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCC-CCccccccccchhhcccccCccccccccCcccccCCc
Confidence 45778889999 99999999998 8889999999743221 11122222334555555554 9999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHH----HHHHHHHCCCeecCCCCCCEEEecC-CcEEEEecCCc
Q 042772 381 ICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVI----GLEYLHCLGIIYRDLKPENILLQKD-GHVVLTDFDLS 455 (489)
Q Consensus 381 ~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~----aL~yLH~~gIvHrDLKP~NILld~~-g~vKL~DFGlS 455 (489)
+|+-+|+| +.+|.++...- ..-+++..++..+.+... ||.++|+.+++|-|+||.||++..+ ..++++|||+.
T Consensus 193 lfiqtE~~-~~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v 270 (524)
T KOG0601|consen 193 LFIQTELC-GESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLV 270 (524)
T ss_pred ceeeeccc-cchhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCccee
Confidence 99999999 57888887654 233788889999999998 9999999999999999999999999 88999999998
Q ss_pred cccC
Q 042772 456 FMTS 459 (489)
Q Consensus 456 ~~~~ 459 (489)
....
T Consensus 271 ~~i~ 274 (524)
T KOG0601|consen 271 SKIS 274 (524)
T ss_pred EEcc
Confidence 6544
No 474
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=98.51 E-value=1.6e-07 Score=99.88 Aligned_cols=112 Identities=15% Similarity=0.080 Sum_probs=83.3
Q ss_pred HHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHhhhcccc
Q 042772 73 LERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALWKKNYGV 152 (489)
Q Consensus 73 ~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (489)
++.+.+++++.|. +|.|++||++|.+++||+++|++|++...+..++
T Consensus 2 ~~~~~d~~~~~d~---~g~i~~~n~~~~~~~g~~~~el~G~~~~~~~~~~------------------------------ 48 (442)
T TIGR02040 2 LATAADVTLLLDA---EGVVREVAANPHHPSFEQLSEWEGRRWEEIVTAE------------------------------ 48 (442)
T ss_pred CcccCcEEEEECC---CCcEEEEEECCCcccccccccCCCCcHhHhhCcc------------------------------
Confidence 5678899999999 9999999999999999999999999987666553
Q ss_pred cccccCcccccCCCHHHHHHHHHHHHcCC-cEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCCccccccc
Q 042772 153 YNFTLGCCLEISSDQATVSKIRDAVREQR-EITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLR 231 (489)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~Te~ke~e~ 231 (489)
........+..+...+. .+.+++....++|..+|+.++..|+.+.. +++++.+|+|+.++.++
T Consensus 49 ------------~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~~~----~~~~i~rDi~~~~~~~~ 112 (442)
T TIGR02040 49 ------------SVEKFELRLSEALRTGRGAVRVELNHIDPSSFELPMRFILVRLGADR----GVLALGRDLRAVAELQQ 112 (442)
T ss_pred ------------hHHHHHHHHHHHhccCCCcceEeeccCCCCCCccCeEEEEEEeCCCC----eEEEEecccHHHHHHHH
Confidence 22333445556565554 45566555567777788888777765532 56788999999887544
Q ss_pred cc
Q 042772 232 NR 233 (489)
Q Consensus 232 ~~ 233 (489)
+.
T Consensus 113 ~l 114 (442)
T TIGR02040 113 QL 114 (442)
T ss_pred HH
Confidence 43
No 475
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=98.43 E-value=4.3e-08 Score=103.26 Aligned_cols=78 Identities=23% Similarity=0.337 Sum_probs=68.4
Q ss_pred CeEEEEEecCCCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCCccc
Q 042772 379 THICLITDFCPGGELFALLDKQ-PMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFM 457 (489)
Q Consensus 379 ~~~~lVmEy~~ggsL~~~L~~~-~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~ 457 (489)
.++|+.|++|...+|.++|.+. .....+......++.|++.|++| +|.+|||+||.||+...+..+||.|||+...
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence 3689999999999999999754 33346778889999999999999 9999999999999999999999999999865
Q ss_pred cC
Q 042772 458 TS 459 (489)
Q Consensus 458 ~~ 459 (489)
..
T Consensus 406 ~~ 407 (516)
T KOG1033|consen 406 QD 407 (516)
T ss_pred cc
Confidence 44
No 476
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.38 E-value=6e-06 Score=79.63 Aligned_cols=143 Identities=21% Similarity=0.267 Sum_probs=90.5
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHH------HHHHHHHHhC---CCCCcceeeE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRA------CIEREIMSLL---DHPFLPTLYA 373 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~------~~E~~il~~l---~HpnIv~l~~ 373 (489)
+...+|...+.+-.....-|.+.... |..+++|...............+ .+.+..+..+ .--....++.
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIei~--~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl 105 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIEID--GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL 105 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEEEC--CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence 34467888888888877777776654 68899997754322111111111 1122222222 1122223222
Q ss_pred EEE-----eCCeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEE
Q 042772 374 SFQ-----TSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVV 448 (489)
Q Consensus 374 ~~~-----~~~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vK 448 (489)
+.. -....+++|||++|..|.++.. +++. +...+..++.-||+.|++|+|..|.|+++++++ ++
T Consensus 106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e~----~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i~ 174 (229)
T PF06176_consen 106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDED----LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-IR 174 (229)
T ss_pred eeeeeeccceeEEEEEEEEecCeecccchh------cCHH----HHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-EE
Confidence 222 2234678999999988876542 2332 345577889999999999999999999998554 99
Q ss_pred EEecCCcccc
Q 042772 449 LTDFDLSFMT 458 (489)
Q Consensus 449 L~DFGlS~~~ 458 (489)
++||+..+.+
T Consensus 175 iID~~~k~~~ 184 (229)
T PF06176_consen 175 IIDTQGKRMS 184 (229)
T ss_pred EEECcccccc
Confidence 9999887654
No 477
>KOG1229 consensus 3'5'-cyclic nucleotide phosphodiesterases [Signal transduction mechanisms]
Probab=98.34 E-value=2.3e-07 Score=94.93 Aligned_cols=110 Identities=17% Similarity=0.309 Sum_probs=94.6
Q ss_pred hhhHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHH
Q 042772 66 GIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLAL 145 (489)
Q Consensus 66 ~~~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (489)
...+-++||....+|-|+|. |..|.|||+||+.++||-+.|++|+....|.-...
T Consensus 156 cnalFaaLD~c~eAiEI~~d---dhViQYVNpAfE~mmG~hkgEliGke~adlpkkdk---------------------- 210 (775)
T KOG1229|consen 156 CNALFAALDECDEAIEICDD---DHVIQYVNPAFENMMGCHKGELIGKEEADLPKKDK---------------------- 210 (775)
T ss_pred hHHHHHHHhhhhhhheeccc---hhHHHHhcHHHHhhhcchhhhhcCCchhhcccccc----------------------
Confidence 44578899999999999999 99999999999999999999999999877754431
Q ss_pred hhhcccccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeee
Q 042772 146 WKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGV 219 (489)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~ 219 (489)
.......-|-..+..+.+++++-..+||+|..---.+.++|+-+..|++.+|+..
T Consensus 211 -------------------nradlldtintcikkgke~qG~~~aRRksgdS~dqh~~itP~~gqggkirhfvsl 265 (775)
T KOG1229|consen 211 -------------------NRADLLDTINTCIKKGKEAQGEEEARRKSGDSCDQHFIITPFAGQGGKIRHFVSL 265 (775)
T ss_pred -------------------chhhhhhhhhHhhhcCccccchHHHhhccCCcccceEEEeeecCCCCceeeehhh
Confidence 2334456678888999999999999999999887789999999999999999764
No 478
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.30 E-value=9.9e-06 Score=79.13 Aligned_cols=139 Identities=22% Similarity=0.169 Sum_probs=97.3
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchH-------------------H--HHHHHHHHHHHHhCC--CCCc
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRN-------------------K--VHRACIEREIMSLLD--HPFL 368 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~-------------------~--~~~~~~E~~il~~l~--HpnI 368 (489)
..|.+|--+.||+|.. ..+..+|+|++.......+. . ......|..-|+++. +-.+
T Consensus 54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv 132 (268)
T COG1718 54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV 132 (268)
T ss_pred eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3788899999999986 45889999998654332211 1 122344666677663 5567
Q ss_pred ceeeEEEEeCCeEEEEEecCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEEecCCc
Q 042772 369 PTLYASFQTSTHICLITDFCPGG-ELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHC-LGIIYRDLKPENILLQKDGH 446 (489)
Q Consensus 369 v~l~~~~~~~~~~~lVmEy~~gg-sL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~-~gIvHrDLKP~NILld~~g~ 446 (489)
++.+.+. ...|||||+... .-.-.|+.- .+....+..+..+++..+.-|-+ .++||+||+.-|||+. ++.
T Consensus 133 P~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv---~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~ 204 (268)
T COG1718 133 PEPIAFR----NNVLVMEFIGDDGLPAPRLKDV---PLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGE 204 (268)
T ss_pred CCceeec----CCeEEEEeccCCCCCCCCcccC---CcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCe
Confidence 7777654 357999999542 111112221 12333677788889999998887 8999999999999999 889
Q ss_pred EEEEecCCccccC
Q 042772 447 VVLTDFDLSFMTS 459 (489)
Q Consensus 447 vKL~DFGlS~~~~ 459 (489)
+.|+|||-|....
T Consensus 205 p~iID~~QaV~~~ 217 (268)
T COG1718 205 PYIIDVSQAVTID 217 (268)
T ss_pred EEEEECccccccC
Confidence 9999999986554
No 479
>PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D.
Probab=98.27 E-value=5.2e-06 Score=70.47 Aligned_cols=106 Identities=20% Similarity=0.279 Sum_probs=74.3
Q ss_pred HHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHhhh
Q 042772 69 LATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALWKK 148 (489)
Q Consensus 69 ~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (489)
|...|+.++.++++.|. ++.|.|.|++..++++.+. ..+||+..-+..+.
T Consensus 1 L~~il~s~~~~i~~vD~---~~~I~~~n~~a~~~f~~~~-~~iGr~l~~~~~~~-------------------------- 50 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDR---NLRIRYFNPAAARLFNLSP-SDIGRPLFDIHPPL-------------------------- 50 (106)
T ss_dssp HHHHHHHSSSEEEEEET---TSBEEEE-SCGC-SS---G-GGTTSBCCCSS-HH--------------------------
T ss_pred ChHHHhcCCCCEEEEcC---CCeEEEeChhHhhhcCCCh-HHCCCCHHHcCCcc--------------------------
Confidence 46789999999999999 9999999999999999764 55799987665442
Q ss_pred cccccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCC
Q 042772 149 NYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGS 224 (489)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~T 224 (489)
....+..+.+.+..++.-..+... .++| .|....+.|++|.+|+..+++.+..|||
T Consensus 51 -----------------~~~~l~~~i~~~~~~~~~~~~~~~-~~~~--~~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 51 -----------------SYPNLKKIIEQVRSGKEEEFEIVI-PNGG--RWYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp -----------------HHHHHHHHHHHHHTTSBSEEEEEE-EETT--EEEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred -----------------chHHHHHHHHHHHcCCCceEEEEe-cCCC--EEEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 334455555666667654444333 3555 4667899999999999999999999997
No 480
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.26 E-value=1.1e-07 Score=106.83 Aligned_cols=150 Identities=26% Similarity=0.321 Sum_probs=122.6
Q ss_pred ccccCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceeeEEEEeCCeEE
Q 042772 303 IGLHHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHIC 382 (489)
Q Consensus 303 i~~~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 382 (489)
...+.+.+.+.+-+|.++.++.+.-..+|...++|......+...+.......+..++....||.++...-.+......+
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 34567888999999999999999988888877877766554444444555555555555556788877766666667899
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCCcEEEEecCC
Q 042772 383 LITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDL 454 (489)
Q Consensus 383 lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g~vKL~DFGl 454 (489)
|+|+|+.+++|...|+..+ +.+++.++.+...+..+.+|||...+.|||++|.|.++..+|+.+++|||.
T Consensus 881 L~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t 950 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGT 950 (1205)
T ss_pred hhhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccc
Confidence 9999999999999998764 467888888888999999999999999999999999999999999999983
No 481
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.26 E-value=5.5e-06 Score=89.54 Aligned_cols=140 Identities=23% Similarity=0.287 Sum_probs=92.6
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccc--hH--------------------------HHHH------HHHHH
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLN--RN--------------------------KVHR------ACIER 357 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~--~~--------------------------~~~~------~~~E~ 357 (489)
++||.-+.|+||+|+.+. |+.||+|+.++..... .+ .... |..|.
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 789999999999999998 9999999887643211 00 0001 12222
Q ss_pred H----HHHhCCCCC------cceeeEEEEeCCeEEEEEecCCCCCHHHH--HhhCCCCCCCHHHHHHHHHHHHHH-HHHH
Q 042772 358 E----IMSLLDHPF------LPTLYASFQTSTHICLITDFCPGGELFAL--LDKQPMKIFREDSARFYAAEVVIG-LEYL 424 (489)
Q Consensus 358 ~----il~~l~Hpn------Iv~l~~~~~~~~~~~lVmEy~~ggsL~~~--L~~~~~~~l~e~~~~~i~~qI~~a-L~yL 424 (489)
+ +.+.+.|-+ |+++|..+. ..-.|+||||+|..+.+. |++.+ ++...+... +.++ ..-|
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~s--t~RVLtME~~~G~~i~Dl~~i~~~g---i~~~~i~~~---l~~~~~~qI 317 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDLS--TKRVLTMEYVDGIKINDLDAIDKRG---ISPHDILNK---LVEAYLEQI 317 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhcC--cceEEEEEecCCccCCCHHHHHHcC---CCHHHHHHH---HHHHHHHHH
Confidence 2 233344555 666665443 346899999999877654 44432 455543333 3332 2334
Q ss_pred HHCCCeecCCCCCCEEEec----CCcEEEEecCCccccCC
Q 042772 425 HCLGIIYRDLKPENILLQK----DGHVVLTDFDLSFMTSC 460 (489)
Q Consensus 425 H~~gIvHrDLKP~NILld~----~g~vKL~DFGlS~~~~~ 460 (489)
-..|++|.|=.|.||++.. ++.+.+.|||+....+.
T Consensus 318 f~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 318 FKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 4689999999999999984 67899999999876653
No 482
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.25 E-value=1.5e-05 Score=77.65 Aligned_cols=136 Identities=10% Similarity=0.043 Sum_probs=83.0
Q ss_pred cccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCC--CcceeeEEEEeCCeEEEEEecCC
Q 042772 312 KPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHP--FLPTLYASFQTSTHICLITDFCP 389 (489)
Q Consensus 312 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hp--nIv~l~~~~~~~~~~~lVmEy~~ 389 (489)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..- .+++.+.+....+...+|||+++
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~ 77 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIV 77 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC-----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecC
Confidence 57899999999984 24467788775432 123457799999887533 35677777777777899999998
Q ss_pred CCC-HH--------------HHH-------hhCCCCCCCHHH-HHHHHHH----------HHH-HHHHHH----HCCCee
Q 042772 390 GGE-LF--------------ALL-------DKQPMKIFREDS-ARFYAAE----------VVI-GLEYLH----CLGIIY 431 (489)
Q Consensus 390 ggs-L~--------------~~L-------~~~~~~~l~e~~-~~~i~~q----------I~~-aL~yLH----~~gIvH 431 (489)
|.+ +. ..+ +..+........ ...+..+ +.. ...+|. ...++|
T Consensus 78 G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~H 157 (226)
T TIGR02172 78 GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLH 157 (226)
T ss_pred CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEe
Confidence 863 11 111 111000011010 0111000 111 122222 124789
Q ss_pred cCCCCCCEEEecCCcEEEEecCCccc
Q 042772 432 RDLKPENILLQKDGHVVLTDFDLSFM 457 (489)
Q Consensus 432 rDLKP~NILld~~g~vKL~DFGlS~~ 457 (489)
+|+.|.||++++++ +.|+||+.+..
T Consensus 158 gD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 158 GDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred cCCCCCcEEEcCCC-cEEEechhcCc
Confidence 99999999999888 99999998864
No 483
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=98.18 E-value=1.9e-06 Score=91.26 Aligned_cols=130 Identities=14% Similarity=0.097 Sum_probs=85.6
Q ss_pred hhHHHHHHHHHhh----hhHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhh
Q 042772 54 WDRAERERDIRQG----IDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEIL 129 (489)
Q Consensus 54 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~ 129 (489)
.|++++++.+++. ..+..+++.++.++++.|+ ++.|+++|++|++++|+...+..+.....+..+.
T Consensus 113 ~DIt~~k~~e~~l~~~~~~~~~~~~~~~~~i~~~d~---~~~i~~~N~~~~~~~g~~~~~~~~~~~~~~~~~~------- 182 (494)
T TIGR02938 113 RDITELHRLEQVVANQKLLIESVVDAAPVAFVLLDP---TGRVILDNQEYKKLATDLRVKEPAHTVLDLLREA------- 182 (494)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcccceEEEEcC---CCCEEEechhHHHhhchhhhhHHHHHHHHHhhHH-------
Confidence 5888877766543 3467888999999999999 9999999999999999999887765432111111
Q ss_pred ccccccchhHHHHHHHhhhcccccccccCcccccCCCHHHHHHHHHHHHcCCcEEE-EEEeeecCCC-eeeEEEeecccc
Q 042772 130 GRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITV-QLINYTKSGK-KFWNLFHLQPMR 207 (489)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~k~g~-~~~~~~~~~p~~ 207 (489)
.... +.+....+..+.. +....+++|. ..|......|+.
T Consensus 183 ------------------------------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (494)
T TIGR02938 183 ------------------------------------WREA---LAENWPQQLAFSNREARFDRGGGRPARWLSCTGSVIG 223 (494)
T ss_pred ------------------------------------hhhh---hhhcchhhhccccceeeeccCCCceeeEEEecCceEE
Confidence 0000 1111111111222 2222344545 789999999988
Q ss_pred cCCCCee---------EEeeeeccCCcccccccc
Q 042772 208 DHKGELQ---------YFIGVQLDGSDHVEPLRN 232 (489)
Q Consensus 208 ~~~g~~~---------~~~~~~~d~Te~ke~e~~ 232 (489)
+..|.+. +++++.+|||++++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~DITe~k~~ee~ 257 (494)
T TIGR02938 224 MESDCADSFFCAAEQPYLLLTIADISNLREEQER 257 (494)
T ss_pred eecchhhheeccCCCchheehHHHHHHHHHHHHH
Confidence 7776653 456688999999987764
No 484
>PF12860 PAS_7: PAS fold
Probab=98.18 E-value=5.1e-06 Score=71.55 Aligned_cols=114 Identities=19% Similarity=0.270 Sum_probs=78.4
Q ss_pred HHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhh-cCCCccccccccchhhhhhccccccchhHHHHHHHhhhccc
Q 042772 73 LERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEI-LGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALWKKNYG 151 (489)
Q Consensus 73 ~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~-~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (489)
||+++.||++-|+ ++.++++|++|.+++|++.+.+ .|.+..-+... ....+.+.
T Consensus 1 Ld~l~~Gv~v~D~---~~rl~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~----------------------~~~~g~~~ 55 (115)
T PF12860_consen 1 LDSLPQGVAVFDS---DGRLVFWNQRFRELFGLPPEMLRPGASFRDLLRR----------------------LAERGEFP 55 (115)
T ss_pred CCCcCceEEEEcC---CCeEEeEcHHHHHHhCCCHHHhcCCCCHHHHHHH----------------------HHHcCCCC
Confidence 5788999999999 9999999999999999999998 78886533211 00111111
Q ss_pred ccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCCccccccc
Q 042772 152 VYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLR 231 (489)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~Te~ke~e~ 231 (489)
+....+.+...............++ ...||. |+.+..+|+-| | ++|.+..|||+.+++|+
T Consensus 56 -----------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~dgr--~l~~~~~~~~~--G---g~v~~~~DVT~~~~~E~ 115 (115)
T PF12860_consen 56 -----------PGDPEAWVRQRLARLRRRQPRSFEL--RLPDGR--WLEVRAQPLPD--G---GFVLTFTDVTERRRAEE 115 (115)
T ss_pred -----------CCCHHHHHHHHHHHHhcCCCceeEE--ECCCCE--EEEEEeEECCC--C---CEEEEEEeCCHHHHhcC
Confidence 0123344444444455555555553 357886 67788888844 4 58899999999998764
No 485
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.13 E-value=4.5e-05 Score=72.53 Aligned_cols=141 Identities=24% Similarity=0.304 Sum_probs=82.5
Q ss_pred ccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCC--CcceeeEEEEe---CCeEEEEE
Q 042772 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHP--FLPTLYASFQT---STHICLIT 385 (489)
Q Consensus 311 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hp--nIv~l~~~~~~---~~~~~lVm 385 (489)
++.|+.|..+.||++.... ..+++|..... .....+..|..+++.+... .+++++..... ....+++|
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~ 74 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLM 74 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH-----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEE
Confidence 4678999999999999775 47889986433 3345666788888877422 35667664432 34579999
Q ss_pred ecCCCCCHHH----------------HHh---hC--CCCCCCHHH---HH---H---H------------HHHHHH-HHH
Q 042772 386 DFCPGGELFA----------------LLD---KQ--PMKIFREDS---AR---F---Y------------AAEVVI-GLE 422 (489)
Q Consensus 386 Ey~~ggsL~~----------------~L~---~~--~~~~l~e~~---~~---~---i------------~~qI~~-aL~ 422 (489)
++++|.++.. .+. .. ....+.... .. . . ...+.. .+.
T Consensus 75 ~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (239)
T PF01636_consen 75 EYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQ 154 (239)
T ss_dssp EEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred EEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHH
Confidence 9999988877 111 11 111111110 00 0 0 011111 233
Q ss_pred HHH-------HCCCeecCCCCCCEEEe-cCCcEEEEecCCcccc
Q 042772 423 YLH-------CLGIIYRDLKPENILLQ-KDGHVVLTDFDLSFMT 458 (489)
Q Consensus 423 yLH-------~~gIvHrDLKP~NILld-~~g~vKL~DFGlS~~~ 458 (489)
.++ ...++|+|+.|.||+++ +++.+.|+||+.+...
T Consensus 155 ~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~ 198 (239)
T PF01636_consen 155 ELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWG 198 (239)
T ss_dssp HHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEE
T ss_pred HHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceEC
Confidence 333 24599999999999999 6677789999988543
No 486
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.12 E-value=3.4e-05 Score=73.60 Aligned_cols=128 Identities=25% Similarity=0.308 Sum_probs=90.9
Q ss_pred cCcccccccCCCCc-eEEEEEEEcCCCcEEEEEEeecccccc------------------hHHHHHHHHHHHHHHhCC--
Q 042772 306 HHFKPIKPLGCGDT-GSVHLVELQGAGELYAMKAMEKSVMLN------------------RNKVHRACIEREIMSLLD-- 364 (489)
Q Consensus 306 ~~y~~~~~LG~G~f-G~Vy~a~~~~tg~~vAiK~i~~~~~~~------------------~~~~~~~~~E~~il~~l~-- 364 (489)
.+++.++.||.|.- |.||+++.. |+.||+|+........ ......|..|-....+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~--g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEID--GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEEC--CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 57999999999999 999999987 6799999932211111 023445777888777664
Q ss_pred -CCCc--ceeeEEEEeC------------------CeEEEEEecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH
Q 042772 365 -HPFL--PTLYASFQTS------------------THICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEY 423 (489)
Q Consensus 365 -HpnI--v~l~~~~~~~------------------~~~~lVmEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~y 423 (489)
+.++ ++++|+..-. ....||.||++... .++.. -+.+|.+-|..
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~~~----~~~~~~~dl~~ 179 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQIR----DIPQMLRDLKI 179 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccchh----HHHHHHHHHHH
Confidence 4456 8888887311 12467888776533 12222 34567788899
Q ss_pred HHHCCCeecCCCCCCEEEecCCcEEEEecCCc
Q 042772 424 LHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 455 (489)
Q Consensus 424 LH~~gIvHrDLKP~NILld~~g~vKL~DFGlS 455 (489)
+|+.||+-+|+++.|.. .=||+|||.+
T Consensus 180 ~~k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 180 LHKLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHCCeeeccCcccccc-----CCEEEecccC
Confidence 99999999999999975 3589999875
No 487
>COG2202 AtoS FOG: PAS/PAC domain [Signal transduction mechanisms]
Probab=98.06 E-value=5.7e-05 Score=65.99 Aligned_cols=116 Identities=26% Similarity=0.339 Sum_probs=88.5
Q ss_pred HHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHhhh
Q 042772 69 LATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALWKK 148 (489)
Q Consensus 69 ~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (489)
+..+++....++++.|. ++.|+++|+++.+++||+..+.++++...+.....
T Consensus 114 ~~~~~~~~~~~~~~~d~---~~~~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~------------------------- 165 (232)
T COG2202 114 LRALLEASPDGIWVLDE---DGRILYANPAAEELLGYSPEEELGRGLSDLIHPED------------------------- 165 (232)
T ss_pred HHHHHhhCCceEEEEeC---CCCEEEeCHHHHHHhCCChHHhcCCChhheEecCC-------------------------
Confidence 78899999999999999 99999999999999999999888888655543320
Q ss_pred cccccccccCcccccCCCH-HHHHHHHHHHHcCCcEEEEEEeeecCCCe-eeEEEeecccccCCCCeeEEeeeeccCCcc
Q 042772 149 NYGVYNFTLGCCLEISSDQ-ATVSKIRDAVREQREITVQLINYTKSGKK-FWNLFHLQPMRDHKGELQYFIGVQLDGSDH 226 (489)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~k~g~~-~~~~~~~~p~~~~~g~~~~~~~~~~d~Te~ 226 (489)
.+. ..................+.....++|.. .|....+.+..+ .|.+..+.....|+++.
T Consensus 166 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~ 228 (232)
T COG2202 166 ----------------EERRELELARALAEGRGGPLEIEYRVRRKDGERVRWILSRISPVRD-DGEIVGVVGIARDITER 228 (232)
T ss_pred ----------------CchhhHHHHHHhhccCCCCcceEEEEEecCCCEEEEEEeeeeEecC-CCceEEEEEEEechHHH
Confidence 111 01111222223334577888889999996 999888888776 78999999999999987
Q ss_pred ccc
Q 042772 227 VEP 229 (489)
Q Consensus 227 ke~ 229 (489)
++.
T Consensus 229 ~~~ 231 (232)
T COG2202 229 KQA 231 (232)
T ss_pred hhc
Confidence 753
No 488
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.03 E-value=6.9e-05 Score=73.12 Aligned_cols=137 Identities=16% Similarity=0.039 Sum_probs=82.7
Q ss_pred ccCCCCc-eEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCCeEEEEEecCCC
Q 042772 313 PLGCGDT-GSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTSTHICLITDFCPG 390 (489)
Q Consensus 313 ~LG~G~f-G~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lVmEy~~g 390 (489)
.|..|.. ..||++... +..+.+|...... ...+..|.++++.+. +--+++++.+....+..++|||+++|
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 76 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPG 76 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCC
Confidence 3444555 789998754 3577888765431 234556888888773 44567788777666678999999998
Q ss_pred CCHHHHH-------------------hhCC--CCCCCHH---HHHHHHH-------------------HHHHHHHHHH--
Q 042772 391 GELFALL-------------------DKQP--MKIFRED---SARFYAA-------------------EVVIGLEYLH-- 425 (489)
Q Consensus 391 gsL~~~L-------------------~~~~--~~~l~e~---~~~~i~~-------------------qI~~aL~yLH-- 425 (489)
.+|.... +..+ ..++... ....... .+...+..|-
T Consensus 77 ~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (244)
T cd05150 77 VPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEAT 156 (244)
T ss_pred ccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhh
Confidence 7776432 1111 0011100 0000000 0111112221
Q ss_pred -----HCCCeecCCCCCCEEEecCCcEEEEecCCccc
Q 042772 426 -----CLGIIYRDLKPENILLQKDGHVVLTDFDLSFM 457 (489)
Q Consensus 426 -----~~gIvHrDLKP~NILld~~g~vKL~DFGlS~~ 457 (489)
...++|+|+.|.|||++.++.+.|+||+.+..
T Consensus 157 ~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 157 RPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred CCCcCceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 23489999999999999887788999998853
No 489
>PRK11006 phoR phosphate regulon sensor protein; Provisional
Probab=98.02 E-value=1.3e-05 Score=84.77 Aligned_cols=51 Identities=18% Similarity=0.168 Sum_probs=46.0
Q ss_pred hhhhHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCcccc
Q 042772 65 QGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFL 118 (489)
Q Consensus 65 ~~~~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l 118 (489)
....+.++++.+++++++.|+ +|.|+++|++|++++||+.+|++|+++..+
T Consensus 96 ~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~a~~l~g~~~~~~~g~~~~~~ 146 (430)
T PRK11006 96 LIKRFRSGAESLPDAVVLTTE---EGNIFWCNGLAQQLLGFRWPEDNGQNILNL 146 (430)
T ss_pred HHHHHHHHHHhCCCeEEEEcC---CCceeHHHHHHHHHhCCCChHhCCCcHHHH
Confidence 345678899999999999999 999999999999999999999999987544
No 490
>COG5002 VicK Signal transduction histidine kinase [Signal transduction mechanisms]
Probab=98.00 E-value=2.7e-05 Score=78.62 Aligned_cols=120 Identities=17% Similarity=0.274 Sum_probs=95.9
Q ss_pred HHHhhhhHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCcc-ccccccchhhhhhccccccchhHH
Q 042772 62 DIRQGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCS-FLELTEYTREEILGRNCSTYTFML 140 (489)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~-~l~~~~~~~~~~~~~~~~~~~~~~ 140 (489)
.+.+.+.|..+|-...++++-||. .|.|+.+|+..+++.|.+.|+++|++.- .|...+
T Consensus 106 ~e~Er~kL~SvlayMtDGViATdR---rG~iI~iN~~A~k~L~~~~E~~~~~~i~elL~i~d------------------ 164 (459)
T COG5002 106 TEQERRKLDSVLAYMTDGVIATDR---RGKIILINKPALKMLGVSKEDALGRSILELLKIED------------------ 164 (459)
T ss_pred HHHHHHHHHHHHHHHcCceEeecC---CCcEEEeccHHHHHhCcCHHHHhcccHHHHhCCcc------------------
Confidence 444667799999999999999999 9999999999999999999999999954 444332
Q ss_pred HHHHHhhhcccccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeee
Q 042772 141 YFLALWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQ 220 (489)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~ 220 (489)
.- .+++.+......+... +..|+.+-..+..+-++-+.|-+.++|+|.
T Consensus 165 --------------------------~y---~~~dL~e~~~s~lld~---~~~~E~~~lrv~Fs~i~rEsGfisGlIaVl 212 (459)
T COG5002 165 --------------------------TY---TFEDLVEKNDSLLLDS---SDEEEGYVLRVNFSVIQRESGFISGLIAVL 212 (459)
T ss_pred --------------------------ce---eHHHHHhcCCcEEEee---cCCCccEEEEEEEEEEeecccccceeEEEE
Confidence 11 1344454555555543 348888999999999999999999999999
Q ss_pred ccCCcccccccccc
Q 042772 221 LDGSDHVEPLRNRL 234 (489)
Q Consensus 221 ~d~Te~ke~e~~~l 234 (489)
.|+||+.+.++++.
T Consensus 213 hDvTEqek~e~ErR 226 (459)
T COG5002 213 HDVTEQEKVERERR 226 (459)
T ss_pred ecccHHHHHHHHHH
Confidence 99999887666554
No 491
>PRK10820 DNA-binding transcriptional regulator TyrR; Provisional
Probab=97.97 E-value=2e-05 Score=85.98 Aligned_cols=105 Identities=11% Similarity=0.091 Sum_probs=76.4
Q ss_pred hhHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHh
Q 042772 67 IDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALW 146 (489)
Q Consensus 67 ~~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (489)
..+..+|+.++++|+++|. +|.|+++|+++++++|++.++++|+++.-+-...
T Consensus 80 ~~L~aIL~sm~eGVi~vD~---~G~I~~iN~aA~~Llg~~~eel~Gk~i~eli~~~------------------------ 132 (520)
T PRK10820 80 RALSALLEALPEPVLSIDM---KGKVELANPASCQLFGQSEEKLRNHTAAQLINGF------------------------ 132 (520)
T ss_pred HHHHHHHHhCCCcEEEECC---CCeeeHhHHHHHHHHCcCHHHHCCCcHHHHcCcc------------------------
Confidence 3478999999999999999 9999999999999999999999999987543221
Q ss_pred hhcccccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccc--cCCCCe--eEEeeeecc
Q 042772 147 KKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMR--DHKGEL--QYFIGVQLD 222 (489)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~--~~~g~~--~~~~~~~~d 222 (489)
. +.+.+..++.. ........+|..|+ +.+.|+. |++|.. .++|.+.+|
T Consensus 133 ---------------------~----l~~~le~~~~~-~~~~~v~~~g~~~~--v~~~PI~~~d~~g~~~~~GaVivlrd 184 (520)
T PRK10820 133 ---------------------N----FLRWLESEPQD-SHNEHVVINGQDFL--MEITPVYLQDENDQHVLVGAVVMLRS 184 (520)
T ss_pred ---------------------h----HHHHHHcCCCc-cceEEEEECCEEEE--EEEEeeeecCCCCceeEEEEEEEecc
Confidence 1 12223333321 01122355688776 5568887 767664 789999999
Q ss_pred CCcc
Q 042772 223 GSDH 226 (489)
Q Consensus 223 ~Te~ 226 (489)
+++.
T Consensus 185 ~~~l 188 (520)
T PRK10820 185 TARM 188 (520)
T ss_pred HHHH
Confidence 9874
No 492
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.95 E-value=0.00038 Score=66.50 Aligned_cols=137 Identities=18% Similarity=0.204 Sum_probs=93.2
Q ss_pred ccccCCCCceEEEEEEEcCCCcEEEEEEeeccccc-------------chHHHHHHHHHHHHHHhCC------CCCccee
Q 042772 311 IKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVML-------------NRNKVHRACIEREIMSLLD------HPFLPTL 371 (489)
Q Consensus 311 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~-------------~~~~~~~~~~E~~il~~l~------HpnIv~l 371 (489)
...||+|+.-.||.- .......||++.+.... .........+|+.-...+. +.+|.++
T Consensus 6 ~~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 467999999988863 33445678988765410 0112344455555444433 8899999
Q ss_pred eEEEEeCCeEEEEEecCC------CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEEecCC
Q 042772 372 YASFQTSTHICLITDFCP------GGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDG 445 (489)
Q Consensus 372 ~~~~~~~~~~~lVmEy~~------ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLKP~NILld~~g 445 (489)
+|+.++..-+.+|+|.+. ..+|.+++... .+++ .. ...+-.-..||-+.+|+.+||+|.||++....
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~---~~~~-~~---~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~ 155 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG---GLTE-EL---RQALDEFKRYLLDHHIVIRDLNPHNIVVQRRD 155 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC---CccH-HH---HHHHHHHHHHHHHcCCeecCCCcccEEEEecC
Confidence 999999988999999763 24688888653 2444 22 22334456688899999999999999996432
Q ss_pred ----cEEEEe-cCCccc
Q 042772 446 ----HVVLTD-FDLSFM 457 (489)
Q Consensus 446 ----~vKL~D-FGlS~~ 457 (489)
.+.|+| ||....
T Consensus 156 ~~~~~lvlIDG~G~~~~ 172 (199)
T PF10707_consen 156 SGEFRLVLIDGLGEKEL 172 (199)
T ss_pred CCceEEEEEeCCCCccc
Confidence 588888 666544
No 493
>PLN02876 acyl-CoA dehydrogenase
Probab=97.93 E-value=9.4e-05 Score=85.11 Aligned_cols=80 Identities=19% Similarity=0.394 Sum_probs=56.4
Q ss_pred ccccCCCCceEEEEEEEcCCC--cEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCc--ceeeEEEEeC---CeEE
Q 042772 311 IKPLGCGDTGSVHLVELQGAG--ELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFL--PTLYASFQTS---THIC 382 (489)
Q Consensus 311 ~~~LG~G~fG~Vy~a~~~~tg--~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnI--v~l~~~~~~~---~~~~ 382 (489)
++.++.|.+..+|+......+ ..+++|........ .....+.+|..+++.+. |+++ ++++.++.+. +..|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~--~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~f 120 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLL--QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAF 120 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccC--ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCce
Confidence 577899999999998876432 46777766443211 12245678999999985 6665 7777777654 4679
Q ss_pred EEEecCCCCC
Q 042772 383 LITDFCPGGE 392 (489)
Q Consensus 383 lVmEy~~ggs 392 (489)
+||||++|..
T Consensus 121 lVME~v~G~~ 130 (822)
T PLN02876 121 YIMEYLEGRI 130 (822)
T ss_pred EEEEecCCcc
Confidence 9999998754
No 494
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=97.87 E-value=1.9e-05 Score=79.46 Aligned_cols=92 Identities=21% Similarity=0.378 Sum_probs=78.1
Q ss_pred HHhCCCCCcceeeEEEEeCC-----eEEEEEecCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC--CCe
Q 042772 360 MSLLDHPFLPTLYASFQTST-----HICLITDFCPGGELFALLDKQ--PMKIFREDSARFYAAEVVIGLEYLHCL--GII 430 (489)
Q Consensus 360 l~~l~HpnIv~l~~~~~~~~-----~~~lVmEy~~ggsL~~~L~~~--~~~~l~e~~~~~i~~qI~~aL~yLH~~--gIv 430 (489)
|-++.|.||++++.+|.+.. .+.+++||+..|+|.++|++. ....+.......|+.||+.||.|||+- -|+
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppii 200 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPII 200 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccc
Confidence 34457999999999987643 588999999999999999873 234577888899999999999999976 499
Q ss_pred ecCCCCCCEEEecCCcEEEEe
Q 042772 431 YRDLKPENILLQKDGHVVLTD 451 (489)
Q Consensus 431 HrDLKP~NILld~~g~vKL~D 451 (489)
|+++..+-|++..+|.||+.-
T Consensus 201 hgnlTc~tifiq~ngLIkig~ 221 (458)
T KOG1266|consen 201 HGNLTCDTIFIQHNGLIKIGS 221 (458)
T ss_pred cCCcchhheeecCCceEEecc
Confidence 999999999999999988753
No 495
>PF14598 PAS_11: PAS domain; PDB: 1P97_A 3F1O_A 2A24_A 3H7W_A 3F1P_A 3H82_A 3F1N_A 4F3L_B 4DJ3_A 2KDK_A ....
Probab=97.78 E-value=0.0002 Score=61.83 Aligned_cols=94 Identities=16% Similarity=0.215 Sum_probs=75.4
Q ss_pred CCCEEEecHh-hHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHhhhcccccccccCcccccCCCH
Q 042772 89 DNPIIFASDS-FLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALWKKNYGVYNFTLGCCLEISSDQ 167 (489)
Q Consensus 89 ~~~i~~~n~~-~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (489)
|+.|+++... ...++||.++|++|+.+-.|..++ |.
T Consensus 11 dgki~~~d~~~v~~~lgy~~~eLvG~s~y~~~H~~-------------------------------------------D~ 47 (111)
T PF14598_consen 11 DGKITYVDSRAVSSLLGYLPEELVGRSIYDFVHPD-------------------------------------------DL 47 (111)
T ss_dssp TSBEEEEETTHHHHHHSS-HHHHTTSBGGGGBSCC-------------------------------------------TH
T ss_pred CcEEEEEcCccChhhcCCCcHHHcCCchHHhCCHh-------------------------------------------hh
Confidence 9999999999 799999999999999988777774 44
Q ss_pred H--HHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCC-CCeeEEeeeeccCCc
Q 042772 168 A--TVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHK-GELQYFIGVQLDGSD 225 (489)
Q Consensus 168 ~--~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~-g~~~~~~~~~~d~Te 225 (489)
. ..+..++.+..++..+.-.....|+|...|+.....++.|.. ++..+++++..=++|
T Consensus 48 ~~~~~~~~~~~~~~g~~~~~~yR~~~k~g~~vwvqt~~~~~~n~~~~~~~~Iv~~n~vlse 108 (111)
T PF14598_consen 48 QRVLKQHHREVLQKGQSVSPYYRFRTKNGGYVWVQTKATLFYNPWTSKPEFIVCTNTVLSE 108 (111)
T ss_dssp HHHHHHHHHHHHHHSSEEEEEEEEE-TTSSEEEEEEEEEEEEETTTTCEEEEEEEEEEESC
T ss_pred hhHHHHHHHHHhhCCCcCcceEEEEecCCcEEEEEEEEEEEECCCCCCccEEEEEEEEecc
Confidence 4 334688888899988888888999999999999999999755 566777777655554
No 496
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.75 E-value=0.0003 Score=65.60 Aligned_cols=134 Identities=23% Similarity=0.216 Sum_probs=94.2
Q ss_pred cCcccccccCCCCceEEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCc-ceeeEEEEeCCeEEEE
Q 042772 306 HHFKPIKPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFL-PTLYASFQTSTHICLI 384 (489)
Q Consensus 306 ~~y~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnI-v~l~~~~~~~~~~~lV 384 (489)
...+..+.|+.|++|.||+|.+. |..+|+|+-... .....+..|.++|..+.--++ +.+|.+-. .++.
T Consensus 22 ~~~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~d-----s~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~ 90 (201)
T COG2112 22 YELRVEKELAKGTTSVVYLGEWR--GGEVALKVRRRD-----SPRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIR 90 (201)
T ss_pred hhhhhhhhhhcccccEEEEeecc--CceEEEEEecCC-----cchhhHHHHHHHHHHhhhcCCCceEEEech----hhhh
Confidence 34667789999999999999988 558899976433 334567779999999876555 34544322 3455
Q ss_pred EecCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC-CCCEEEecCCcEEEEecCCccccC
Q 042772 385 TDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLK-PENILLQKDGHVVLTDFDLSFMTS 459 (489)
Q Consensus 385 mEy~~ggsL~~~L~~~~~~~l~e~~~~~i~~qI~~aL~yLH~~gIvHrDLK-P~NILld~~g~vKL~DFGlS~~~~ 459 (489)
|||+.|-+|.+.-... +..++ ..++.+-.-|-..||-|..|. |...+|-.++.+.|+||.-|++..
T Consensus 91 me~i~G~~L~~~~~~~-----~rk~l----~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k~ 157 (201)
T COG2112 91 MEYIDGRPLGKLEIGG-----DRKHL----LRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFKK 157 (201)
T ss_pred hhhhcCcchhhhhhcc-----cHHHH----HHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhhcc
Confidence 9999888887765431 22333 235555455667899998885 566666666699999999997443
No 497
>PRK11086 sensory histidine kinase DcuS; Provisional
Probab=97.64 E-value=0.00019 Score=77.69 Aligned_cols=108 Identities=18% Similarity=0.272 Sum_probs=75.8
Q ss_pred hHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCCh---hhhcCCCccccccccchhhhhhccccccchhHHHHHH
Q 042772 68 DLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTR---EEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLA 144 (489)
Q Consensus 68 ~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~---~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (489)
.+..+++.+.++++++|. ++.|+++|+++++++|++. ++.+|+.+..+...
T Consensus 222 ~~~~il~~~~~gIi~~D~---~g~I~~~N~~a~~llg~~~~~~~~~~~~~~~~~~~~----------------------- 275 (542)
T PRK11086 222 QRQAMLQSIKEGVIAVDD---RGEVTLINDEAKRLFNYKKGLEDDPLGTDVESWMPV----------------------- 275 (542)
T ss_pred HHHHHHHHhcCcEEEECC---CCeEEEEhHHHHHHhCCCcCCcccccCCcHHHhCCc-----------------------
Confidence 356889999999999999 9999999999999998763 45566554322211
Q ss_pred HhhhcccccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCC
Q 042772 145 LWKKNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGS 224 (489)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~T 224 (489)
..+...+..+++...+.. +.+|..+ .....|+.+ +|++.+++.+.+|+|
T Consensus 276 --------------------------~~~~~~~~~~~~~~~~~~--~~~g~~~--~~~~~pi~~-~g~~~g~v~~~rDit 324 (542)
T PRK11086 276 --------------------------SRLKEVLRTGTPRRDEEI--NINGRLL--LTNTVPVRV-NGEIIGAIATFRDKT 324 (542)
T ss_pred --------------------------hhHHHHHhcCCCccceEE--EECCEEE--EEEEEEEeE-CCEEEEEEEEEEEch
Confidence 123444555554433222 3356544 456789998 899999999999999
Q ss_pred cccccccc
Q 042772 225 DHVEPLRN 232 (489)
Q Consensus 225 e~ke~e~~ 232 (489)
+.++.+++
T Consensus 325 e~~~l~~~ 332 (542)
T PRK11086 325 EVRQLAQR 332 (542)
T ss_pred HHHHHHHH
Confidence 97765443
No 498
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.59 E-value=0.00048 Score=66.97 Aligned_cols=74 Identities=11% Similarity=0.114 Sum_probs=44.8
Q ss_pred ccccCCCCce-EEEEEEEcCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCC---CcceeeEEEEeC---CeEEE
Q 042772 311 IKPLGCGDTG-SVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHP---FLPTLYASFQTS---THICL 383 (489)
Q Consensus 311 ~~~LG~G~fG-~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~Hp---nIv~l~~~~~~~---~~~~l 383 (489)
++.|+.|+.. .||+.. ..+++|..... .....+..|.+++..+... -++.+++..... ...++
T Consensus 2 ~~~~~~gG~~n~vy~~~-----~~~VlR~~~~~-----~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~ 71 (235)
T cd05155 2 IEPVDSGGTDNATFRLG-----DDMSVRLPSAA-----GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWS 71 (235)
T ss_pred ceeccCCCcccceEEcC-----CceEEEcCCcc-----chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceE
Confidence 4567766665 588752 34677865432 1234677899998877521 344555433322 23588
Q ss_pred EEecCCCCCHH
Q 042772 384 ITDFCPGGELF 394 (489)
Q Consensus 384 VmEy~~ggsL~ 394 (489)
+|++++|.++.
T Consensus 72 l~~~i~G~~l~ 82 (235)
T cd05155 72 VYRWLEGETAT 82 (235)
T ss_pred EEEeecCCCCC
Confidence 99999886653
No 499
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.58 E-value=0.00063 Score=65.80 Aligned_cols=75 Identities=28% Similarity=0.365 Sum_probs=47.6
Q ss_pred ccccCCCCceEEEEEEEcC-CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceeeEEEEeCCeEEEEEecC
Q 042772 311 IKPLGCGDTGSVHLVELQG-AGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLD-HPFLPTLYASFQTSTHICLITDFC 388 (489)
Q Consensus 311 ~~~LG~G~fG~Vy~a~~~~-tg~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lVmEy~ 388 (489)
++.|..|-...+|++.... .++.|++|....... ..-....|..+++.+. +...++++..+. . .++|||+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~----~~~d~~~E~~~~~~l~~~gl~P~v~~~~~-~---~~l~e~i 74 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE----LIIDRERELRIHKLLSKHGLAPKLYATFQ-N---GLIYEFI 74 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc----ceecHHHHHHHHHHHHhCCCCCeEEEEeC-C---cEEEEee
Confidence 4567788889999987553 356788997654311 1112235888888774 333455554432 1 4799999
Q ss_pred CCCCH
Q 042772 389 PGGEL 393 (489)
Q Consensus 389 ~ggsL 393 (489)
+|.++
T Consensus 75 ~G~~l 79 (235)
T cd05157 75 PGRTL 79 (235)
T ss_pred CCCcC
Confidence 88665
No 500
>PRK11388 DNA-binding transcriptional regulator DhaR; Provisional
Probab=97.54 E-value=0.00048 Score=77.11 Aligned_cols=106 Identities=15% Similarity=0.233 Sum_probs=76.9
Q ss_pred hHHHHHHhccCcEEEECCCCCCCCEEEecHhhHHhcCCChhhhcCCCccccccccchhhhhhccccccchhHHHHHHHhh
Q 042772 68 DLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCSFLELTEYTREEILGRNCSTYTFMLYFLALWK 147 (489)
Q Consensus 68 ~~~~~~~~~~~~~~i~d~~~~~~~i~~~n~~~~~~~gy~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (489)
.+...++.+.++|++.|+ +|.|+++|+++++++|++.++++|+++..+...
T Consensus 204 ~~~~il~~~~~gVl~vD~---~G~I~~~N~aa~~llg~s~~~l~G~~i~~l~~~-------------------------- 254 (638)
T PRK11388 204 QLNALLESMDDGVIAWDE---QGNLQFLNAQAARLLRLDATASQGRAITELLTL-------------------------- 254 (638)
T ss_pred HHHHHHhccCCcEEEECC---CCeEehhhHHHHHHhCcCHHHHCCCcHHHHhcc--------------------------
Confidence 345688999999999999 999999999999999999999999987544311
Q ss_pred hcccccccccCcccccCCCHHHHHHHHHHHHcCCcEEEEEEeeecCCCeeeEEEeecccccCCCCeeEEeeeeccCCcc
Q 042772 148 KNYGVYNFTLGCCLEISSDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDH 226 (489)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~p~~~~~g~~~~~~~~~~d~Te~ 226 (489)
. ..+.+.+..++.+...-.....+|..+|+.+++.|+.+..|.. ++.+..|++..
T Consensus 255 ------------------~----~~l~~vl~~~~~~~~~~~~l~~~g~~~~~~v~~~Pi~~~~g~~--~v~~l~~~~~~ 309 (638)
T PRK11388 255 ------------------P----AVLQQAIKQAHPLKHVEVTFESQGQFIDAVITLKPIIEGQGTS--FILLLHPVEQM 309 (638)
T ss_pred ------------------c----hHHHHHHhcCCceeeEEEEEecCCceEEEEEEEEeecccCceE--EEEEehhhHHH
Confidence 0 1234455556655443344455788889999999997655542 55555676653
Done!