BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 042773
         (91 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis
           Vinifera
 pdb|3HFS|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis
           Vinifera
 pdb|3HFS|B Chain B, Structure Of Apo Anthocyanidin Reductase From Vitis
           Vinifera
          Length = 338

 Score = 37.0 bits (84), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 5/45 (11%)

Query: 47  VEGCKGVFCVATPRTL--EDPVGLEKELALPAVQGTLNVLEAAKR 89
           + GC  VF VATP     EDP   E ++  PA+QG +NV++A  R
Sbjct: 78  IAGCDFVFHVATPVHFASEDP---ENDMIKPAIQGVVNVMKACTR 119


>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera
           At 1.8 A.
 pdb|2C29|F Chain F, Structure Of Dihydroflavonol Reductase From Vitis Vinifera
           At 1.8 A.
 pdb|2IOD|A Chain A, Binding Of Two Substrate Analogue Molecules To
           Dihydroflavonol-4-Reductase Alters The Functional
           Geometry Of The Catalytic Site
 pdb|2IOD|B Chain B, Binding Of Two Substrate Analogue Molecules To
           Dihydroflavonol-4-Reductase Alters The Functional
           Geometry Of The Catalytic Site
 pdb|2IOD|C Chain C, Binding Of Two Substrate Analogue Molecules To
           Dihydroflavonol-4-Reductase Alters The Functional
           Geometry Of The Catalytic Site
 pdb|2IOD|D Chain D, Binding Of Two Substrate Analogue Molecules To
           Dihydroflavonol-4-Reductase Alters The Functional
           Geometry Of The Catalytic Site
 pdb|2NNL|D Chain D, Binding Of Two Substrate Analogue Molecules To
           Dihydroflavonol-4-Reductase Alters The Functional
           Geometry Of The Catalytic Site
 pdb|2NNL|F Chain F, Binding Of Two Substrate Analogue Molecules To
           Dihydroflavonol-4-Reductase Alters The Functional
           Geometry Of The Catalytic Site
 pdb|3C1T|A Chain A, Binding Of Two Substrate Analogue Molecules To
           Dihydroflavonol 4-Reductase Alters The Functional
           Geometry Of The Catalytic Site
 pdb|3C1T|B Chain B, Binding Of Two Substrate Analogue Molecules To
           Dihydroflavonol 4-Reductase Alters The Functional
           Geometry Of The Catalytic Site
 pdb|3C1T|C Chain C, Binding Of Two Substrate Analogue Molecules To
           Dihydroflavonol 4-Reductase Alters The Functional
           Geometry Of The Catalytic Site
 pdb|3C1T|D Chain D, Binding Of Two Substrate Analogue Molecules To
           Dihydroflavonol 4-Reductase Alters The Functional
           Geometry Of The Catalytic Site
 pdb|3BXX|A Chain A, Binding Of Two Substrate Analogue Molecules To
           Dihydroflavonol 4-Reductase Alters The Functional
           Geometry Of The Catalytic Site
 pdb|3BXX|B Chain B, Binding Of Two Substrate Analogue Molecules To
           Dihydroflavonol 4-Reductase Alters The Functional
           Geometry Of The Catalytic Site
 pdb|3BXX|C Chain C, Binding Of Two Substrate Analogue Molecules To
           Dihydroflavonol 4-Reductase Alters The Functional
           Geometry Of The Catalytic Site
 pdb|3BXX|D Chain D, Binding Of Two Substrate Analogue Molecules To
           Dihydroflavonol 4-Reductase Alters The Functional
           Geometry Of The Catalytic Site
 pdb|3BXX|E Chain E, Binding Of Two Substrate Analogue Molecules To
           Dihydroflavonol 4-Reductase Alters The Functional
           Geometry Of The Catalytic Site
 pdb|3BXX|F Chain F, Binding Of Two Substrate Analogue Molecules To
           Dihydroflavonol 4-Reductase Alters The Functional
           Geometry Of The Catalytic Site
          Length = 337

 Score = 35.0 bits (79), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 8/61 (13%)

Query: 31  SRLAYWTPTLFN-GRF--TVEGCKGVFCVATPRTLE--DPVGLEKELALPAVQGTLNVLE 85
           + L  W   L + G F   ++GC GVF VATP   E  DP   E E+  P ++G L +++
Sbjct: 56  THLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDP---ENEVIKPTIEGMLGIMK 112

Query: 86  A 86
           +
Sbjct: 113 S 113


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.323    0.138    0.452 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,789,375
Number of Sequences: 62578
Number of extensions: 97788
Number of successful extensions: 198
Number of sequences better than 100.0: 2
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 197
Number of HSP's gapped (non-prelim): 2
length of query: 91
length of database: 14,973,337
effective HSP length: 58
effective length of query: 33
effective length of database: 11,343,813
effective search space: 374345829
effective search space used: 374345829
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)