Query 042773
Match_columns 91
No_of_seqs 105 out of 1157
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 09:18:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042773.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042773hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1502 Flavonol reductase/cin 99.7 1.5E-17 3.3E-22 115.1 7.3 80 1-90 33-118 (327)
2 PF01073 3Beta_HSD: 3-beta hyd 99.4 1.7E-12 3.7E-17 88.6 6.8 59 32-91 46-107 (280)
3 PLN02986 cinnamyl-alcohol dehy 99.2 1.7E-10 3.6E-15 79.2 8.2 83 1-90 32-117 (322)
4 PLN02662 cinnamyl-alcohol dehy 99.1 4E-10 8.7E-15 77.0 8.5 83 1-90 31-116 (322)
5 PLN02650 dihydroflavonol-4-red 99.1 6.1E-10 1.3E-14 77.4 7.8 83 1-90 32-117 (351)
6 COG1086 Predicted nucleoside-d 99.0 9E-10 2E-14 81.0 5.6 80 5-91 282-367 (588)
7 PLN02427 UDP-apiose/xylose syn 99.0 1.9E-09 4.1E-14 75.9 6.9 83 1-91 42-128 (386)
8 PRK11908 NAD-dependent epimera 99.0 1.4E-09 3.1E-14 75.4 6.2 60 31-91 46-110 (347)
9 PLN02214 cinnamoyl-CoA reducta 99.0 3.6E-09 7.7E-14 73.7 7.5 77 1-91 37-118 (342)
10 PRK15181 Vi polysaccharide bio 99.0 1.8E-09 4E-14 75.2 5.9 60 31-91 69-132 (348)
11 COG1088 RfbB dTDP-D-glucose 4, 98.9 1.1E-09 2.5E-14 75.4 4.6 59 31-90 51-115 (340)
12 PF02719 Polysacc_synt_2: Poly 98.9 4.9E-10 1.1E-14 77.1 1.5 81 4-91 29-119 (293)
13 COG1087 GalE UDP-glucose 4-epi 98.9 2.4E-09 5.3E-14 73.9 4.2 58 33-91 46-109 (329)
14 PRK08125 bifunctional UDP-gluc 98.9 7.9E-09 1.7E-13 77.6 6.7 60 31-91 360-424 (660)
15 PLN00198 anthocyanidin reducta 98.8 1.9E-08 4.1E-13 69.6 8.0 59 31-90 59-120 (338)
16 PLN02989 cinnamyl-alcohol dehy 98.8 2.9E-08 6.2E-13 68.2 8.7 84 1-90 32-118 (325)
17 TIGR03589 PseB UDP-N-acetylglu 98.8 1.6E-08 3.5E-13 70.0 7.1 60 31-91 53-116 (324)
18 TIGR01472 gmd GDP-mannose 4,6- 98.8 3E-08 6.6E-13 68.7 6.7 60 31-91 55-120 (343)
19 CHL00194 ycf39 Ycf39; Provisio 98.7 2E-08 4.4E-13 69.1 5.5 72 1-91 27-101 (317)
20 PLN02583 cinnamoyl-CoA reducta 98.7 1E-07 2.2E-12 65.2 7.6 58 31-90 57-117 (297)
21 PLN02896 cinnamyl-alcohol dehy 98.7 7.9E-08 1.7E-12 66.9 6.9 81 1-90 37-127 (353)
22 PF07993 NAD_binding_4: Male s 98.6 2.2E-08 4.8E-13 67.0 3.0 56 31-89 60-124 (249)
23 PLN02166 dTDP-glucose 4,6-dehy 98.6 1.1E-07 2.4E-12 68.6 6.7 58 31-91 168-226 (436)
24 PLN02206 UDP-glucuronate decar 98.6 9.3E-08 2E-12 69.1 6.2 58 31-91 167-225 (442)
25 PLN02686 cinnamoyl-CoA reducta 98.6 1E-07 2.2E-12 67.1 5.0 87 1-90 80-169 (367)
26 TIGR03466 HpnA hopanoid-associ 98.5 3E-07 6.4E-12 62.7 6.1 57 32-90 44-103 (328)
27 PLN02572 UDP-sulfoquinovose sy 98.5 3.2E-07 7E-12 66.2 5.8 61 31-91 113-181 (442)
28 COG0451 WcaG Nucleoside-diphos 98.5 4.4E-07 9.4E-12 61.4 5.7 58 32-90 43-106 (314)
29 TIGR02622 CDP_4_6_dhtase CDP-g 98.4 7.8E-07 1.7E-11 61.9 6.5 59 31-90 52-116 (349)
30 KOG1371 UDP-glucose 4-epimeras 98.4 2.2E-07 4.7E-12 64.8 3.5 60 31-91 54-119 (343)
31 PRK09987 dTDP-4-dehydrorhamnos 98.4 5E-07 1.1E-11 61.9 4.7 56 35-91 35-96 (299)
32 PLN02260 probable rhamnose bio 98.4 9E-07 2E-11 66.5 6.4 60 31-91 57-122 (668)
33 PLN02503 fatty acyl-CoA reduct 98.4 1.2E-06 2.5E-11 65.8 6.8 57 31-90 192-257 (605)
34 PLN02996 fatty acyl-CoA reduct 98.4 1.2E-06 2.6E-11 64.2 6.7 57 31-90 84-150 (491)
35 TIGR01181 dTDP_gluc_dehyt dTDP 98.4 8.4E-07 1.8E-11 60.0 5.3 59 31-90 50-114 (317)
36 PRK10217 dTDP-glucose 4,6-dehy 98.4 9E-07 2E-11 61.4 5.5 58 31-89 51-114 (355)
37 KOG1430 C-3 sterol dehydrogena 98.3 7.2E-07 1.6E-11 63.2 4.1 59 31-91 55-117 (361)
38 PRK10084 dTDP-glucose 4,6 dehy 98.3 1E-06 2.2E-11 61.1 4.9 58 31-89 50-113 (352)
39 PLN02653 GDP-mannose 4,6-dehyd 98.3 1.1E-06 2.3E-11 60.9 4.8 60 31-91 60-125 (340)
40 COG1089 Gmd GDP-D-mannose dehy 98.3 5.5E-07 1.2E-11 62.2 2.4 83 1-90 29-119 (345)
41 TIGR01746 Thioester-redct thio 98.2 4.8E-06 1E-10 57.2 6.6 57 31-90 61-126 (367)
42 PLN03209 translocon at the inn 98.2 4.2E-06 9.1E-11 62.4 6.3 87 1-91 107-199 (576)
43 PLN02778 3,5-epimerase/4-reduc 98.2 4E-06 8.6E-11 57.6 5.2 58 33-91 36-102 (298)
44 PLN02695 GDP-D-mannose-3',5'-e 98.2 5.7E-06 1.2E-10 58.4 5.8 59 32-91 65-128 (370)
45 PLN02240 UDP-glucose 4-epimera 98.1 6.8E-06 1.5E-10 56.9 5.9 60 31-91 58-123 (352)
46 PRK07201 short chain dehydroge 98.1 1.1E-05 2.5E-10 60.1 7.2 58 31-91 51-116 (657)
47 PF01370 Epimerase: NAD depend 98.1 2.4E-06 5.2E-11 55.6 3.0 59 32-91 43-107 (236)
48 PRK10675 UDP-galactose-4-epime 98.1 1.2E-05 2.7E-10 55.3 6.1 60 31-91 50-115 (338)
49 PLN02725 GDP-4-keto-6-deoxyman 98.0 8.9E-06 1.9E-10 55.1 4.4 55 36-91 31-92 (306)
50 KOG1429 dTDP-glucose 4-6-dehyd 98.0 1.4E-06 2.9E-11 60.3 0.3 58 31-91 75-133 (350)
51 TIGR02197 heptose_epim ADP-L-g 98.0 1.9E-05 4.2E-10 53.6 5.8 55 35-91 45-106 (314)
52 PF13460 NAD_binding_10: NADH( 98.0 2.1E-05 4.5E-10 49.8 5.4 62 1-91 25-89 (183)
53 TIGR01777 yfcH conserved hypot 98.0 1.8E-05 3.9E-10 53.1 5.2 48 44-91 52-101 (292)
54 PLN02657 3,8-divinyl protochlo 98.0 1.6E-05 3.5E-10 56.6 4.9 56 31-91 111-173 (390)
55 PRK11150 rfaD ADP-L-glycero-D- 97.9 2.5E-05 5.5E-10 53.2 5.6 41 49-91 68-108 (308)
56 PRK06181 short chain dehydroge 97.9 3.9E-05 8.6E-10 51.0 5.4 80 1-88 28-122 (263)
57 COG3320 Putative dehydrogenase 97.8 2.9E-05 6.2E-10 55.3 4.5 56 31-89 60-124 (382)
58 TIGR03443 alpha_am_amid L-amin 97.8 6.3E-05 1.4E-09 60.3 6.9 57 31-90 1034-1099(1389)
59 PRK06482 short chain dehydroge 97.8 5.5E-05 1.2E-09 50.8 5.5 74 2-87 30-118 (276)
60 TIGR01214 rmlD dTDP-4-dehydror 97.8 4.1E-05 8.9E-10 51.5 4.8 54 37-91 33-92 (287)
61 PLN02260 probable rhamnose bio 97.8 4.4E-05 9.5E-10 57.5 5.0 56 35-91 409-473 (668)
62 PRK12826 3-ketoacyl-(acyl-carr 97.8 7E-05 1.5E-09 49.1 5.2 79 1-88 33-126 (251)
63 TIGR01179 galE UDP-glucose-4-e 97.7 8.3E-05 1.8E-09 50.4 5.4 59 32-91 48-112 (328)
64 PRK06180 short chain dehydroge 97.7 0.00012 2.6E-09 49.3 6.0 77 1-88 31-121 (277)
65 PRK12320 hypothetical protein; 97.7 7.9E-05 1.7E-09 56.9 5.5 53 31-91 40-94 (699)
66 PRK07666 fabG 3-ketoacyl-(acyl 97.7 8.6E-05 1.9E-09 48.7 4.8 80 1-88 34-127 (239)
67 COG1091 RfbD dTDP-4-dehydrorha 97.7 7.5E-05 1.6E-09 51.5 4.6 53 38-91 34-92 (281)
68 PRK05865 hypothetical protein; 97.6 0.0001 2.3E-09 57.3 5.3 52 31-91 40-94 (854)
69 KOG0747 Putative NAD+-dependen 97.6 1.8E-05 4E-10 54.7 1.1 60 31-91 57-122 (331)
70 PRK13394 3-hydroxybutyrate deh 97.6 0.00014 3E-09 48.2 4.8 78 2-87 35-130 (262)
71 PRK07814 short chain dehydroge 97.6 0.00016 3.4E-09 48.4 4.9 80 1-89 37-131 (263)
72 PRK09135 pteridine reductase; 97.6 0.00026 5.6E-09 46.4 5.6 57 32-89 58-129 (249)
73 PRK08267 short chain dehydroge 97.5 0.00024 5.2E-09 47.2 5.4 76 2-88 29-120 (260)
74 PLN00141 Tic62-NAD(P)-related 97.5 0.0001 2.2E-09 49.1 3.5 57 31-91 62-123 (251)
75 PRK09291 short chain dehydroge 97.5 0.00028 6.1E-09 46.6 5.4 79 1-87 29-115 (257)
76 PRK07453 protochlorophyllide o 97.5 0.00015 3.3E-09 49.9 4.3 79 2-89 34-128 (322)
77 TIGR01963 PHB_DH 3-hydroxybuty 97.5 0.00037 8E-09 45.9 5.8 80 1-88 28-121 (255)
78 PRK08219 short chain dehydroge 97.5 0.0004 8.6E-09 44.9 5.8 74 1-86 29-112 (227)
79 PRK05653 fabG 3-ketoacyl-(acyl 97.5 0.0003 6.5E-09 45.8 5.1 79 1-88 32-125 (246)
80 PRK07326 short chain dehydroge 97.5 0.00028 6E-09 46.1 4.8 80 1-89 33-126 (237)
81 PRK06940 short chain dehydroge 97.4 0.00033 7.2E-09 47.3 5.1 76 3-89 29-113 (275)
82 PRK07231 fabG 3-ketoacyl-(acyl 97.4 0.00029 6.4E-09 46.2 4.4 79 1-89 32-126 (251)
83 PRK07774 short chain dehydroge 97.4 0.00033 7.2E-09 46.1 4.7 79 2-89 34-130 (250)
84 KOG1221 Acyl-CoA reductase [Li 97.4 0.00032 6.9E-09 51.4 4.8 59 29-90 77-144 (467)
85 PRK12746 short chain dehydroge 97.4 0.00041 8.9E-09 45.8 5.1 59 31-89 56-134 (254)
86 PRK12829 short chain dehydroge 97.4 0.00054 1.2E-08 45.4 5.6 76 2-88 39-130 (264)
87 PLN02253 xanthoxin dehydrogena 97.4 0.00046 1E-08 46.4 5.3 58 31-89 66-140 (280)
88 PRK08213 gluconate 5-dehydroge 97.4 0.00035 7.6E-09 46.4 4.6 79 3-89 41-133 (259)
89 PRK06182 short chain dehydroge 97.4 0.00038 8.2E-09 46.7 4.8 55 32-87 47-116 (273)
90 PRK07806 short chain dehydroge 97.4 0.00015 3.3E-09 47.7 2.7 57 31-89 56-122 (248)
91 PRK08643 acetoin reductase; Va 97.4 0.00067 1.5E-08 44.9 5.7 80 2-89 30-123 (256)
92 PRK06197 short chain dehydroge 97.3 0.00053 1.2E-08 46.9 5.1 58 31-89 67-141 (306)
93 PRK07523 gluconate 5-dehydroge 97.3 0.00041 8.9E-09 46.0 4.4 80 2-89 38-131 (255)
94 TIGR03206 benzo_BadH 2-hydroxy 97.3 0.00081 1.8E-08 44.2 5.8 78 3-88 32-123 (250)
95 PRK12827 short chain dehydroge 97.3 0.00091 2E-08 43.8 5.6 57 31-88 59-130 (249)
96 PRK06949 short chain dehydroge 97.3 0.00067 1.4E-08 44.8 4.9 79 1-88 36-129 (258)
97 PRK06194 hypothetical protein; 97.3 0.00091 2E-08 45.0 5.5 56 31-87 55-125 (287)
98 PRK06914 short chain dehydroge 97.2 0.00071 1.5E-08 45.4 4.9 81 1-88 30-124 (280)
99 PRK06500 short chain dehydroge 97.2 0.0011 2.5E-08 43.4 5.7 58 31-89 52-124 (249)
100 PRK05717 oxidoreductase; Valid 97.2 0.00059 1.3E-08 45.3 4.2 58 31-89 56-130 (255)
101 PRK07454 short chain dehydroge 97.2 0.00063 1.4E-08 44.7 4.3 79 1-88 33-126 (241)
102 PRK12429 3-hydroxybutyrate deh 97.2 0.001 2.2E-08 43.8 5.1 79 2-88 32-124 (258)
103 PRK08263 short chain dehydroge 97.2 0.001 2.2E-08 44.7 5.0 74 2-87 31-119 (275)
104 PRK05993 short chain dehydroge 97.2 0.0012 2.6E-08 44.5 5.4 59 32-90 48-125 (277)
105 PRK07890 short chain dehydroge 97.1 0.0006 1.3E-08 45.0 3.8 58 31-89 54-127 (258)
106 PRK05565 fabG 3-ketoacyl-(acyl 97.1 0.0015 3.2E-08 42.7 5.5 59 31-89 55-127 (247)
107 PRK07677 short chain dehydroge 97.1 0.0017 3.7E-08 43.0 5.8 77 3-88 30-121 (252)
108 PRK07060 short chain dehydroge 97.1 0.00099 2.1E-08 43.6 4.5 58 32-89 54-121 (245)
109 PRK12935 acetoacetyl-CoA reduc 97.1 0.00099 2.2E-08 43.8 4.4 58 31-89 56-128 (247)
110 PRK08063 enoyl-(acyl carrier p 97.1 0.0019 4.1E-08 42.5 5.5 59 31-89 54-126 (250)
111 PRK06196 oxidoreductase; Provi 97.1 0.0021 4.6E-08 44.2 5.9 56 32-88 72-140 (315)
112 PRK05867 short chain dehydroge 97.1 0.0013 2.8E-08 43.5 4.7 77 3-88 38-129 (253)
113 PRK06138 short chain dehydroge 97.1 0.0028 6.1E-08 41.6 6.2 58 31-88 53-124 (252)
114 PRK08628 short chain dehydroge 97.1 0.0025 5.5E-08 42.2 6.0 78 2-88 35-125 (258)
115 PRK07775 short chain dehydroge 97.0 0.0016 3.5E-08 43.8 5.2 58 31-88 59-130 (274)
116 PRK10538 malonic semialdehyde 97.0 0.0015 3.2E-08 43.2 4.9 57 31-88 46-118 (248)
117 PRK12939 short chain dehydroge 97.0 0.0027 5.9E-08 41.6 6.0 79 3-89 36-128 (250)
118 PRK07067 sorbitol dehydrogenas 97.0 0.0022 4.8E-08 42.5 5.6 58 31-89 52-124 (257)
119 PRK09134 short chain dehydroge 97.0 0.0016 3.6E-08 43.2 4.7 59 31-89 59-131 (258)
120 PRK06179 short chain dehydroge 97.0 0.0022 4.7E-08 42.8 5.2 57 31-88 45-116 (270)
121 PF05368 NmrA: NmrA-like famil 97.0 0.00097 2.1E-08 43.8 3.4 67 1-91 25-94 (233)
122 PRK09072 short chain dehydroge 97.0 0.0024 5.3E-08 42.5 5.4 78 2-89 33-124 (263)
123 PRK08264 short chain dehydroge 97.0 0.0025 5.3E-08 41.7 5.2 57 31-88 49-117 (238)
124 PRK08226 short chain dehydroge 96.9 0.0025 5.4E-08 42.3 5.3 59 31-89 54-126 (263)
125 PRK06935 2-deoxy-D-gluconate 3 96.9 0.0032 6.9E-08 41.8 5.7 57 31-88 63-134 (258)
126 PRK05875 short chain dehydroge 96.9 0.0021 4.5E-08 43.1 4.8 58 31-89 58-131 (276)
127 PRK07478 short chain dehydroge 96.9 0.0031 6.7E-08 41.7 5.6 78 2-88 34-127 (254)
128 PRK05866 short chain dehydroge 96.9 0.0032 6.9E-08 43.1 5.8 79 2-88 68-162 (293)
129 PRK08251 short chain dehydroge 96.9 0.0035 7.7E-08 41.2 5.8 80 3-88 31-124 (248)
130 PRK05650 short chain dehydroge 96.9 0.0026 5.7E-08 42.5 5.3 77 3-87 29-119 (270)
131 PRK07102 short chain dehydroge 96.9 0.0021 4.6E-08 42.2 4.7 80 2-89 29-120 (243)
132 PRK06953 short chain dehydroge 96.9 0.0026 5.7E-08 41.4 5.0 57 32-89 45-116 (222)
133 PRK05693 short chain dehydroge 96.9 0.0027 5.8E-08 42.6 5.0 56 32-88 45-115 (274)
134 PRK07063 short chain dehydroge 96.9 0.0037 8.1E-08 41.5 5.7 79 3-88 36-129 (260)
135 PRK05854 short chain dehydroge 96.9 0.0023 5E-08 44.1 4.8 81 2-88 42-135 (313)
136 PF04321 RmlD_sub_bind: RmlD s 96.9 0.00052 1.1E-08 47.0 1.5 54 37-91 34-93 (286)
137 PRK08278 short chain dehydroge 96.9 0.0053 1.1E-07 41.3 6.3 58 31-89 62-134 (273)
138 PRK07424 bifunctional sterol d 96.9 0.0042 9.1E-08 44.9 6.1 57 32-89 225-286 (406)
139 PRK06172 short chain dehydroge 96.9 0.0022 4.8E-08 42.3 4.5 78 2-88 35-128 (253)
140 PRK06113 7-alpha-hydroxysteroi 96.8 0.0035 7.6E-08 41.6 5.2 57 31-88 60-130 (255)
141 PRK06123 short chain dehydroge 96.8 0.0026 5.7E-08 41.7 4.6 58 31-89 52-125 (248)
142 smart00822 PKS_KR This enzymat 96.8 0.0019 4.2E-08 39.5 3.7 58 31-89 53-125 (180)
143 PRK08277 D-mannonate oxidoredu 96.8 0.0032 6.9E-08 42.3 5.0 77 3-88 39-145 (278)
144 TIGR01830 3oxo_ACP_reduc 3-oxo 96.8 0.0028 6.1E-08 41.2 4.6 58 31-89 48-120 (239)
145 PRK09186 flagellin modificatio 96.8 0.0033 7.2E-08 41.4 4.9 81 2-88 32-129 (256)
146 PRK06841 short chain dehydroge 96.8 0.004 8.6E-08 41.1 5.3 58 31-89 61-133 (255)
147 PRK12828 short chain dehydroge 96.8 0.0037 7.9E-08 40.6 5.1 78 1-88 34-125 (239)
148 PRK06198 short chain dehydroge 96.8 0.0037 8.1E-08 41.4 5.1 59 31-89 56-128 (260)
149 PRK05557 fabG 3-ketoacyl-(acyl 96.8 0.0078 1.7E-07 39.2 6.6 58 31-89 55-127 (248)
150 PRK09242 tropinone reductase; 96.8 0.0034 7.4E-08 41.6 4.8 80 2-88 37-131 (257)
151 PRK07074 short chain dehydroge 96.8 0.0041 9E-08 41.1 5.2 58 31-88 49-120 (257)
152 PRK12384 sorbitol-6-phosphate 96.7 0.0052 1.1E-07 40.7 5.4 58 32-89 54-125 (259)
153 PRK12825 fabG 3-ketoacyl-(acyl 96.7 0.0035 7.7E-08 40.8 4.5 57 31-88 56-127 (249)
154 PRK12745 3-ketoacyl-(acyl-carr 96.7 0.0045 9.7E-08 40.8 4.9 58 31-89 52-126 (256)
155 PRK07576 short chain dehydroge 96.7 0.0031 6.7E-08 42.2 4.2 58 31-89 58-130 (264)
156 PRK12936 3-ketoacyl-(acyl-carr 96.6 0.0081 1.8E-07 39.2 5.9 57 31-88 52-123 (245)
157 PRK05876 short chain dehydroge 96.6 0.0036 7.8E-08 42.4 4.1 58 31-88 55-126 (275)
158 TIGR03325 BphB_TodD cis-2,3-di 96.6 0.0031 6.8E-08 42.0 3.7 59 31-89 51-128 (262)
159 PRK08945 putative oxoacyl-(acy 96.6 0.0077 1.7E-07 39.7 5.5 79 2-88 40-136 (247)
160 PRK07069 short chain dehydroge 96.6 0.012 2.6E-07 38.6 6.4 57 33-89 53-127 (251)
161 KOG1372 GDP-mannose 4,6 dehydr 96.6 0.0012 2.7E-08 45.4 1.7 86 1-91 55-148 (376)
162 PRK12367 short chain dehydroge 96.6 0.0076 1.6E-07 40.4 5.4 55 34-89 61-120 (245)
163 PRK07825 short chain dehydroge 96.6 0.01 2.3E-07 39.6 6.1 57 32-88 51-121 (273)
164 PRK07109 short chain dehydroge 96.5 0.0062 1.3E-07 42.5 5.0 79 2-88 36-128 (334)
165 PRK06139 short chain dehydroge 96.5 0.0079 1.7E-07 42.1 5.5 78 3-88 36-127 (330)
166 PRK07035 short chain dehydroge 96.5 0.007 1.5E-07 39.9 5.0 58 31-88 57-129 (252)
167 TIGR02415 23BDH acetoin reduct 96.5 0.0053 1.1E-07 40.4 4.4 58 31-89 49-121 (254)
168 PRK07041 short chain dehydroge 96.5 0.0048 1E-07 40.1 4.1 57 31-88 45-112 (230)
169 PRK08085 gluconate 5-dehydroge 96.5 0.0067 1.4E-07 40.1 4.7 58 31-89 58-130 (254)
170 PRK06101 short chain dehydroge 96.4 0.0066 1.4E-07 40.0 4.4 59 31-89 46-115 (240)
171 PRK05855 short chain dehydroge 96.4 0.0061 1.3E-07 44.5 4.6 78 2-88 343-435 (582)
172 PRK08177 short chain dehydroge 96.4 0.0047 1E-07 40.2 3.6 57 32-89 46-117 (225)
173 PRK06128 oxidoreductase; Provi 96.4 0.01 2.2E-07 40.5 5.4 58 31-89 106-179 (300)
174 PRK07024 short chain dehydroge 96.4 0.0063 1.4E-07 40.4 4.3 55 32-87 51-121 (257)
175 PRK08265 short chain dehydroge 96.4 0.019 4.2E-07 38.3 6.5 58 31-89 52-123 (261)
176 PRK06398 aldose dehydrogenase; 96.4 0.014 3E-07 38.9 5.8 58 32-89 45-116 (258)
177 PRK12744 short chain dehydroge 96.3 0.01 2.2E-07 39.4 4.9 58 31-89 61-133 (257)
178 PRK06701 short chain dehydroge 96.3 0.012 2.6E-07 40.1 5.4 58 31-89 96-169 (290)
179 PRK06124 gluconate 5-dehydroge 96.3 0.0096 2.1E-07 39.3 4.8 58 31-89 60-132 (256)
180 PRK07856 short chain dehydroge 96.3 0.0099 2.2E-07 39.3 4.7 58 31-89 47-119 (252)
181 TIGR03649 ergot_EASG ergot alk 96.3 0.01 2.2E-07 40.1 4.7 61 1-91 26-96 (285)
182 PRK08217 fabG 3-ketoacyl-(acyl 96.3 0.0076 1.6E-07 39.5 4.0 57 31-88 54-134 (253)
183 PRK07201 short chain dehydroge 96.2 0.011 2.4E-07 44.2 5.2 78 2-88 399-493 (657)
184 PLN00015 protochlorophyllide r 96.2 0.013 2.8E-07 40.2 5.1 78 3-88 27-119 (308)
185 TIGR01829 AcAcCoA_reduct aceto 96.2 0.013 2.8E-07 38.1 4.8 57 31-88 50-121 (242)
186 PRK07062 short chain dehydroge 96.2 0.032 7E-07 37.1 6.8 80 2-88 36-130 (265)
187 PRK12743 oxidoreductase; Provi 96.2 0.018 4E-07 38.1 5.6 58 31-89 52-124 (256)
188 PRK07097 gluconate 5-dehydroge 96.2 0.016 3.4E-07 38.7 5.2 57 31-88 59-130 (265)
189 PRK08220 2,3-dihydroxybenzoate 96.1 0.013 2.8E-07 38.5 4.7 57 31-88 48-119 (252)
190 PRK12937 short chain dehydroge 96.1 0.015 3.3E-07 38.0 4.9 58 31-89 55-127 (245)
191 PRK12748 3-ketoacyl-(acyl-carr 96.1 0.026 5.7E-07 37.3 6.1 58 31-89 67-139 (256)
192 PRK08017 oxidoreductase; Provi 96.1 0.019 4.1E-07 37.8 5.3 53 32-85 46-114 (256)
193 PRK07831 short chain dehydroge 96.1 0.034 7.3E-07 37.0 6.4 56 32-88 70-140 (262)
194 PRK08324 short chain dehydroge 96.0 0.023 4.9E-07 43.4 6.1 77 2-88 450-541 (681)
195 PTZ00325 malate dehydrogenase; 96.0 0.025 5.4E-07 39.8 5.7 45 45-91 72-116 (321)
196 PRK12428 3-alpha-hydroxysteroi 96.0 0.0072 1.6E-07 40.0 2.9 52 34-89 26-84 (241)
197 PRK05872 short chain dehydroge 96.0 0.023 5E-07 38.7 5.5 57 32-88 58-128 (296)
198 PRK06947 glucose-1-dehydrogena 96.0 0.021 4.5E-07 37.5 5.1 58 31-88 52-124 (248)
199 PRK06200 2,3-dihydroxy-2,3-dih 96.0 0.011 2.3E-07 39.4 3.6 76 3-89 35-129 (263)
200 PLN00106 malate dehydrogenase 95.9 0.031 6.8E-07 39.3 5.7 46 44-91 81-126 (323)
201 PRK12824 acetoacetyl-CoA reduc 95.8 0.032 7E-07 36.4 5.4 56 31-87 52-122 (245)
202 PRK08703 short chain dehydroge 95.8 0.024 5.2E-07 37.1 4.7 80 2-89 34-132 (239)
203 PRK06057 short chain dehydroge 95.8 0.021 4.6E-07 37.8 4.5 55 34-88 54-124 (255)
204 PRK06125 short chain dehydroge 95.8 0.048 1E-06 36.2 6.1 79 3-88 36-124 (259)
205 PRK07904 short chain dehydroge 95.8 0.063 1.4E-06 35.8 6.7 78 1-85 36-127 (253)
206 PRK07832 short chain dehydroge 95.7 0.022 4.8E-07 38.1 4.5 56 32-88 51-121 (272)
207 PRK06077 fabG 3-ketoacyl-(acyl 95.7 0.028 6E-07 36.9 4.9 58 32-89 57-128 (252)
208 PRK05884 short chain dehydroge 95.7 0.025 5.5E-07 37.0 4.6 57 32-89 45-118 (223)
209 PRK08339 short chain dehydroge 95.7 0.035 7.5E-07 37.2 5.3 78 3-88 37-128 (263)
210 PRK07985 oxidoreductase; Provi 95.7 0.032 6.9E-07 38.1 5.2 58 31-89 100-173 (294)
211 PRK08642 fabG 3-ketoacyl-(acyl 95.7 0.021 4.5E-07 37.5 4.2 58 31-88 52-130 (253)
212 PRK06114 short chain dehydroge 95.7 0.025 5.5E-07 37.5 4.6 57 31-88 58-129 (254)
213 PRK09730 putative NAD(P)-bindi 95.7 0.022 4.9E-07 37.1 4.2 58 31-88 51-123 (247)
214 KOG1210 Predicted 3-ketosphing 95.6 0.027 5.9E-07 39.6 4.6 83 1-89 60-156 (331)
215 PRK08993 2-deoxy-D-gluconate 3 95.6 0.04 8.8E-07 36.5 5.2 58 31-89 57-129 (253)
216 PRK07792 fabG 3-ketoacyl-(acyl 95.5 0.038 8.3E-07 37.9 5.1 57 31-88 62-132 (306)
217 PRK06550 fabG 3-ketoacyl-(acyl 95.5 0.052 1.1E-06 35.3 5.6 57 31-88 45-111 (235)
218 TIGR01289 LPOR light-dependent 95.5 0.029 6.2E-07 38.7 4.5 78 3-88 33-125 (314)
219 TIGR01832 kduD 2-deoxy-D-gluco 95.5 0.047 1E-06 35.8 5.3 57 31-88 52-123 (248)
220 PLN00016 RNA-binding protein; 95.5 0.033 7.2E-07 39.3 4.7 44 32-91 111-156 (378)
221 PRK12823 benD 1,6-dihydroxycyc 95.4 0.042 9E-07 36.4 4.9 57 31-88 56-128 (260)
222 PF00106 adh_short: short chai 95.4 0.02 4.4E-07 35.3 3.1 59 31-89 52-124 (167)
223 PRK08589 short chain dehydroge 95.3 0.081 1.8E-06 35.5 6.0 58 31-88 54-126 (272)
224 PRK06171 sorbitol-6-phosphate 95.2 0.045 9.7E-07 36.4 4.5 58 31-89 49-130 (266)
225 PRK06484 short chain dehydroge 95.2 0.032 6.8E-07 40.8 4.0 75 3-89 298-388 (520)
226 PRK09009 C factor cell-cell si 95.1 0.1 2.2E-06 34.0 6.0 59 31-89 43-117 (235)
227 PRK07577 short chain dehydroge 95.1 0.061 1.3E-06 34.9 4.9 54 34-88 44-111 (234)
228 PRK06523 short chain dehydroge 95.1 0.086 1.9E-06 34.9 5.6 57 31-88 49-122 (260)
229 TIGR01500 sepiapter_red sepiap 95.1 0.032 6.9E-07 37.0 3.5 80 3-88 33-133 (256)
230 PRK05786 fabG 3-ketoacyl-(acyl 95.0 0.037 7.9E-07 36.0 3.6 80 1-89 32-123 (238)
231 PRK07578 short chain dehydroge 95.0 0.07 1.5E-06 34.0 4.8 54 35-89 35-99 (199)
232 TIGR02632 RhaD_aldol-ADH rhamn 94.9 0.087 1.9E-06 40.4 5.8 57 32-88 466-536 (676)
233 PRK06463 fabG 3-ketoacyl-(acyl 94.9 0.083 1.8E-06 34.9 5.0 55 32-87 52-121 (255)
234 PRK06483 dihydromonapterin red 94.9 0.12 2.6E-06 33.7 5.7 58 32-89 47-118 (236)
235 PRK12481 2-deoxy-D-gluconate 3 94.8 0.051 1.1E-06 36.1 4.0 58 31-89 55-127 (251)
236 cd01336 MDH_cytoplasmic_cytoso 94.7 0.12 2.5E-06 36.4 5.6 45 44-90 73-117 (325)
237 PRK12938 acetyacetyl-CoA reduc 94.6 0.13 2.9E-06 33.6 5.4 56 32-88 54-124 (246)
238 PRK12747 short chain dehydroge 94.6 0.14 3E-06 33.7 5.5 58 32-89 55-132 (252)
239 PRK06484 short chain dehydroge 94.5 0.094 2E-06 38.3 4.9 57 32-89 52-125 (520)
240 PRK08261 fabG 3-ketoacyl-(acyl 94.4 0.1 2.3E-06 37.6 5.0 56 33-89 258-328 (450)
241 KOG1205 Predicted dehydrogenas 94.1 0.17 3.8E-06 35.1 5.4 56 32-88 64-134 (282)
242 PRK07023 short chain dehydroge 94.1 0.047 1E-06 35.8 2.5 59 31-89 45-122 (243)
243 TIGR01831 fabG_rel 3-oxoacyl-( 94.1 0.086 1.9E-06 34.4 3.7 56 31-87 48-118 (239)
244 PRK12742 oxidoreductase; Provi 93.9 0.19 4E-06 32.7 5.0 57 32-89 52-119 (237)
245 PRK08936 glucose-1-dehydrogena 93.9 0.21 4.7E-06 33.1 5.4 56 31-87 57-127 (261)
246 PLN02780 ketoreductase/ oxidor 93.6 0.24 5.2E-06 34.4 5.5 81 2-88 81-177 (320)
247 KOG1203 Predicted dehydrogenas 93.6 0.077 1.7E-06 38.6 2.9 79 1-91 106-192 (411)
248 KOG1431 GDP-L-fucose synthetas 93.5 0.042 9E-07 37.6 1.5 54 37-91 38-98 (315)
249 PF08659 KR: KR domain; Inter 93.5 0.13 2.7E-06 32.9 3.6 59 31-89 53-125 (181)
250 TIGR02685 pter_reduc_Leis pter 93.4 0.4 8.6E-06 32.0 6.0 57 32-88 53-138 (267)
251 PRK07791 short chain dehydroge 93.3 0.42 9.2E-06 32.4 6.2 57 31-88 64-135 (286)
252 COG0300 DltE Short-chain dehyd 93.2 0.33 7.1E-06 33.4 5.5 77 4-87 36-126 (265)
253 COG4221 Short-chain alcohol de 93.0 0.31 6.7E-06 33.2 5.0 76 2-88 34-124 (246)
254 PRK05599 hypothetical protein; 92.9 0.58 1.3E-05 30.9 6.2 78 3-87 28-119 (246)
255 TIGR02813 omega_3_PfaA polyket 92.5 0.33 7.2E-06 42.5 5.6 58 31-89 2094-2165(2582)
256 PRK07533 enoyl-(acyl carrier p 92.5 0.47 1E-05 31.6 5.4 56 32-88 61-135 (258)
257 PRK08340 glucose-1-dehydrogena 91.6 0.41 8.9E-06 31.7 4.3 56 31-86 48-119 (259)
258 cd00704 MDH Malate dehydrogena 91.4 0.73 1.6E-05 32.4 5.5 45 44-90 71-115 (323)
259 PRK06079 enoyl-(acyl carrier p 90.7 0.58 1.3E-05 31.1 4.4 57 32-89 56-131 (252)
260 PRK08159 enoyl-(acyl carrier p 90.5 1.3 2.8E-05 29.9 5.9 57 32-89 61-136 (272)
261 PRK08594 enoyl-(acyl carrier p 90.3 1.5 3.3E-05 29.2 6.1 58 31-88 59-134 (257)
262 PRK08862 short chain dehydroge 90.2 1.7 3.7E-05 28.6 6.2 77 4-88 35-127 (227)
263 KOG1611 Predicted short chain- 89.9 0.93 2E-05 30.9 4.7 78 2-87 33-127 (249)
264 PRK08415 enoyl-(acyl carrier p 89.9 1.4 3E-05 29.9 5.6 54 34-88 58-130 (274)
265 PRK06924 short chain dehydroge 89.8 0.3 6.4E-06 32.0 2.3 57 31-88 48-124 (251)
266 PF03435 Saccharop_dh: Sacchar 89.5 0.21 4.6E-06 35.4 1.5 48 3-60 28-78 (386)
267 TIGR01758 MDH_euk_cyt malate d 89.3 1.5 3.3E-05 30.9 5.7 45 44-90 70-114 (324)
268 PRK12859 3-ketoacyl-(acyl-carr 88.9 2.1 4.5E-05 28.4 5.9 57 31-87 68-138 (256)
269 KOG2865 NADH:ubiquinone oxidor 88.3 0.51 1.1E-05 33.5 2.7 58 30-91 108-168 (391)
270 PRK07889 enoyl-(acyl carrier p 88.3 1.9 4.2E-05 28.6 5.5 57 32-88 58-132 (256)
271 PRK08303 short chain dehydroge 88.1 3.3 7.1E-05 28.6 6.6 56 32-88 68-143 (305)
272 PRK08690 enoyl-(acyl carrier p 87.4 2.2 4.7E-05 28.5 5.3 56 33-88 58-132 (261)
273 KOG2774 NAD dependent epimeras 87.1 0.095 2.1E-06 36.1 -1.4 57 34-91 90-151 (366)
274 KOG1208 Dehydrogenases with di 86.5 2.4 5.3E-05 29.8 5.3 79 3-87 64-154 (314)
275 COG2910 Putative NADH-flavin r 86.5 2.6 5.7E-05 28.0 5.0 44 1-60 27-73 (211)
276 PRK06997 enoyl-(acyl carrier p 85.5 2.5 5.5E-05 28.2 4.9 55 34-89 59-133 (260)
277 PRK06505 enoyl-(acyl carrier p 85.3 2.6 5.7E-05 28.3 4.9 54 34-88 60-132 (271)
278 COG0702 Predicted nucleoside-d 85.2 0.63 1.4E-05 30.7 1.8 46 1-61 27-75 (275)
279 COG1090 Predicted nucleoside-d 83.4 3.8 8.2E-05 28.7 5.0 41 49-89 56-98 (297)
280 PRK07370 enoyl-(acyl carrier p 83.0 2.2 4.8E-05 28.4 3.7 57 32-88 60-134 (258)
281 cd02905 Macro_GDAP2_like Macro 82.9 5.9 0.00013 24.5 5.3 39 49-90 68-106 (140)
282 PRK05086 malate dehydrogenase; 82.2 6.3 0.00014 27.6 5.8 46 44-91 64-109 (312)
283 PRK06732 phosphopantothenate-- 81.8 2.5 5.4E-05 28.2 3.6 32 31-62 58-94 (229)
284 PRK07984 enoyl-(acyl carrier p 81.6 6.5 0.00014 26.4 5.6 57 32-88 57-132 (262)
285 COG1748 LYS9 Saccharopine dehy 81.6 1.2 2.5E-05 32.4 2.0 48 2-60 29-79 (389)
286 PF00056 Ldh_1_N: lactate/mala 80.9 10 0.00022 23.3 5.9 45 44-90 64-108 (141)
287 KOG4169 15-hydroxyprostaglandi 80.4 2.3 5E-05 29.1 3.0 48 31-82 55-112 (261)
288 PRK08416 7-alpha-hydroxysteroi 79.6 3.8 8.3E-05 27.1 4.0 57 31-87 59-135 (260)
289 PF13561 adh_short_C2: Enoyl-( 78.5 4.7 0.0001 26.3 4.1 54 35-89 48-121 (241)
290 PRK09620 hypothetical protein; 77.3 1.4 3E-05 29.6 1.3 19 44-62 80-100 (229)
291 PRK06603 enoyl-(acyl carrier p 76.4 10 0.00022 25.3 5.2 53 35-88 62-133 (260)
292 PRK06720 hypothetical protein; 70.4 17 0.00037 23.0 5.0 32 31-62 65-106 (169)
293 KOG1610 Corticosteroid 11-beta 68.9 19 0.00042 25.6 5.3 56 31-87 76-149 (322)
294 cd02906 Macro_1 Macro domain, 67.9 25 0.00054 21.8 5.3 38 49-90 77-116 (147)
295 TIGR01759 MalateDH-SF1 malate 67.0 24 0.00051 24.9 5.5 45 44-90 74-118 (323)
296 cd01338 MDH_choloroplast_like 65.8 27 0.00058 24.6 5.6 45 44-90 73-117 (322)
297 TIGR01771 L-LDH-NAD L-lactate 62.8 31 0.00066 24.0 5.4 44 45-90 60-103 (299)
298 cd02904 Macro_H2A_like Macro d 62.6 31 0.00066 22.6 5.1 36 49-90 91-126 (186)
299 cd02907 Macro_Af1521_BAL_like 62.5 37 0.00079 21.5 5.4 38 49-90 73-111 (175)
300 PLN02730 enoyl-[acyl-carrier-p 62.4 18 0.00039 25.2 4.2 41 48-89 119-166 (303)
301 KOG1200 Mitochondrial/plastidi 61.8 17 0.00038 24.6 3.8 56 33-89 64-134 (256)
302 cd05290 LDH_3 A subgroup of L- 61.5 37 0.0008 23.8 5.7 47 45-91 64-110 (307)
303 PF01661 Macro: Macro domain; 61.5 29 0.00062 19.9 4.5 39 49-90 54-92 (118)
304 KOG2733 Uncharacterized membra 60.8 6.7 0.00015 28.6 1.9 53 4-61 39-95 (423)
305 PTZ00082 L-lactate dehydrogena 59.8 45 0.00097 23.5 5.9 45 45-89 70-117 (321)
306 PRK00066 ldh L-lactate dehydro 59.5 36 0.00078 23.8 5.4 44 45-90 69-112 (315)
307 cd02908 Macro_Appr_pase_like M 58.7 41 0.00088 21.1 5.1 38 49-90 67-104 (165)
308 KOG1209 1-Acyl dihydroxyaceton 58.3 14 0.0003 25.4 2.9 74 1-88 35-124 (289)
309 TIGR01772 MDH_euk_gproteo mala 57.2 45 0.00098 23.4 5.5 44 45-90 63-106 (312)
310 cd01337 MDH_glyoxysomal_mitoch 57.2 43 0.00094 23.5 5.4 44 45-90 64-107 (310)
311 TIGR01756 LDH_protist lactate 57.1 50 0.0011 23.2 5.7 44 45-90 56-99 (313)
312 PF10154 DUF2362: Uncharacteri 55.8 13 0.00028 28.1 2.8 54 35-91 372-426 (510)
313 PRK06300 enoyl-(acyl carrier p 55.8 34 0.00074 23.7 4.7 41 48-89 118-165 (299)
314 cd02903 Macro_BAL_like Macro d 55.4 45 0.00098 20.2 5.0 35 49-90 70-104 (137)
315 KOG1201 Hydroxysteroid 17-beta 55.1 45 0.00098 23.6 5.1 56 32-87 87-156 (300)
316 KOG0725 Reductases with broad 54.4 55 0.0012 22.4 5.5 81 2-88 36-134 (270)
317 cd05291 HicDH_like L-2-hydroxy 52.3 58 0.0012 22.5 5.4 43 46-90 65-107 (306)
318 PRK00431 RNase III inhibitor; 51.9 58 0.0013 20.6 5.0 37 49-89 74-110 (177)
319 PRK05442 malate dehydrogenase; 51.8 64 0.0014 22.8 5.6 44 44-89 75-118 (326)
320 PLN00135 malate dehydrogenase 47.3 85 0.0018 22.1 5.6 43 45-89 54-96 (309)
321 cd00300 LDH_like L-lactate deh 46.7 92 0.002 21.6 5.7 44 45-90 62-105 (300)
322 KOG1494 NAD-dependent malate d 46.4 53 0.0011 23.4 4.4 44 44-89 91-134 (345)
323 COG3967 DltE Short-chain dehyd 46.0 32 0.00069 23.4 3.2 74 1-87 32-122 (245)
324 TIGR00715 precor6x_red precorr 44.8 74 0.0016 21.8 4.9 27 34-60 46-76 (256)
325 PRK04143 hypothetical protein; 44.3 88 0.0019 21.6 5.2 14 49-62 160-173 (264)
326 cd02749 Macro Macro domain, a 44.2 70 0.0015 19.1 5.0 38 49-89 72-109 (147)
327 PHA02099 hypothetical protein 43.9 19 0.00042 19.9 1.6 14 46-59 40-53 (84)
328 PF11848 DUF3368: Domain of un 43.6 14 0.0003 18.6 0.9 15 77-91 2-16 (48)
329 cd01078 NAD_bind_H4MPT_DH NADP 42.5 14 0.0003 23.6 1.0 48 2-58 56-106 (194)
330 cd05293 LDH_1 A subgroup of L- 42.2 99 0.0021 21.7 5.3 43 46-90 68-110 (312)
331 TIGR01757 Malate-DH_plant mala 40.8 1E+02 0.0022 22.6 5.3 43 45-89 116-158 (387)
332 PF04127 DFP: DNA / pantothena 40.6 24 0.00052 22.9 2.0 32 31-62 59-95 (185)
333 PLN00112 malate dehydrogenase 40.0 1.1E+02 0.0023 22.9 5.4 43 45-89 172-214 (444)
334 PLN02602 lactate dehydrogenase 39.3 1.2E+02 0.0025 21.8 5.4 43 46-90 102-144 (350)
335 cd00650 LDH_MDH_like NAD-depen 38.7 1.2E+02 0.0026 20.3 5.4 45 44-90 65-109 (263)
336 cd05295 MDH_like Malate dehydr 38.1 1.2E+02 0.0025 22.8 5.3 45 44-90 194-238 (452)
337 COG0039 Mdh Malate/lactate deh 36.5 1.5E+02 0.0033 21.1 5.5 44 45-90 65-108 (313)
338 cd03330 Macro_2 Macro domain, 36.5 95 0.0021 18.5 5.2 35 50-90 68-102 (133)
339 TIGR02114 coaB_strep phosphopa 34.9 44 0.00095 22.2 2.6 15 48-62 79-93 (227)
340 KOG1199 Short-chain alcohol de 32.2 3.2 7E-05 27.5 -3.1 55 31-86 55-130 (260)
341 PTZ00117 malate dehydrogenase; 31.5 1.8E+02 0.004 20.3 5.6 43 45-89 69-111 (319)
342 PRK04148 hypothetical protein; 29.2 54 0.0012 20.3 2.1 25 32-56 59-84 (134)
343 KOG0532 Leucine-rich repeat (L 28.1 1.1E+02 0.0023 24.2 3.8 13 79-91 640-652 (722)
344 smart00506 A1pp Appr-1"-p proc 27.0 1.4E+02 0.003 17.4 4.9 37 49-89 70-106 (133)
345 COG3268 Uncharacterized conser 26.0 30 0.00064 25.2 0.6 19 44-62 66-84 (382)
346 cd05294 LDH-like_MDH_nadp A la 25.3 2.4E+02 0.0052 19.6 5.6 42 46-89 69-110 (309)
347 cd01339 LDH-like_MDH L-lactate 23.5 2.5E+02 0.0055 19.2 5.6 43 45-89 62-104 (300)
348 PF01488 Shikimate_DH: Shikima 22.6 55 0.0012 19.7 1.3 46 3-60 41-86 (135)
349 KOG1014 17 beta-hydroxysteroid 22.5 47 0.001 23.6 1.1 75 4-85 79-168 (312)
350 cd03331 Macro_Poa1p_like_SNF2 22.3 1.1E+02 0.0024 19.3 2.6 24 33-58 2-27 (152)
351 COG0293 FtsJ 23S rRNA methylas 21.4 2.6E+02 0.0057 18.6 5.2 33 29-61 83-123 (205)
352 cd06395 PB1_Map2k5 PB1 domain 20.5 37 0.0008 19.5 0.2 15 2-16 53-67 (91)
353 PF06162 DUF976: Caenorhabditi 20.1 68 0.0015 20.7 1.3 12 49-60 81-92 (166)
No 1
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.72 E-value=1.5e-17 Score=115.11 Aligned_cols=80 Identities=38% Similarity=0.578 Sum_probs=68.0
Q ss_pred CeeecCCCCCh---hhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCCCcChHHHHHH
Q 042773 1 MNAAIFPGSDP---SHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLEDPVGLEKELAL 74 (91)
Q Consensus 1 ~~~~vr~~~k~---~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~ 74 (91)
||||||++++. +.|+.+ ++++ +++..+++|+. .+ +.+++|||+|||+|+|..+. ..+|..++++
T Consensus 33 V~gtVR~~~~~k~~~~L~~l-----~~a~----~~l~l~~aDL~d~~sf~~ai~gcdgVfH~Asp~~~~-~~~~e~~li~ 102 (327)
T KOG1502|consen 33 VRGTVRDPEDEKKTEHLRKL-----EGAK----ERLKLFKADLLDEGSFDKAIDGCDGVFHTASPVDFD-LEDPEKELID 102 (327)
T ss_pred EEEEEcCcchhhhHHHHHhc-----ccCc----ccceEEeccccccchHHHHHhCCCEEEEeCccCCCC-CCCcHHhhhh
Confidence 79999998764 357777 6765 68999999999 66 99999999999999999873 3446568999
Q ss_pred HHHHHHHHHHHHHHHc
Q 042773 75 PAVQGTLNVLEAAKRL 90 (91)
Q Consensus 75 ~nv~gt~nlLeaa~~~ 90 (91)
+++.||.|+|++|++.
T Consensus 103 pav~Gt~nVL~ac~~~ 118 (327)
T KOG1502|consen 103 PAVKGTKNVLEACKKT 118 (327)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999999975
No 2
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.37 E-value=1.7e-12 Score=88.64 Aligned_cols=59 Identities=31% Similarity=0.268 Sum_probs=49.4
Q ss_pred CeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 32 RLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
..+++++|++ .. .++++|+|+|||+|++.+... ..+.+.++++||.||+|||++|+++|
T Consensus 46 ~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~ 107 (280)
T PF01073_consen 46 VKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPWG-DYPPEEYYKVNVDGTRNVLEAARKAG 107 (280)
T ss_pred ceeEEEeccccHHHHHHHhcCCceEEEeCccccccC-cccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4459999999 55 889999999999999986532 34446899999999999999999864
No 3
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.18 E-value=1.7e-10 Score=79.22 Aligned_cols=83 Identities=28% Similarity=0.402 Sum_probs=61.7
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHH
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAV 77 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv 77 (91)
|++++|+.++.+.+..+... .+.. ++++++++|++ .. ..+++++|+|||+|++... ...+|..+++++|+
T Consensus 32 V~~~~r~~~~~~~~~~~~~~--~~~~----~~~~~~~~Dl~~~~~~~~~~~~~d~vih~A~~~~~-~~~~~~~~~~~~nv 104 (322)
T PLN02986 32 VKATVRDLTDRKKTEHLLAL--DGAK----ERLKLFKADLLEESSFEQAIEGCDAVFHTASPVFF-TVKDPQTELIDPAL 104 (322)
T ss_pred EEEEECCCcchHHHHHHHhc--cCCC----CceEEEecCCCCcchHHHHHhCCCEEEEeCCCcCC-CCCCchhhhhHHHH
Confidence 57889998776655554321 1111 57899999999 65 7778899999999998643 23455446789999
Q ss_pred HHHHHHHHHHHHc
Q 042773 78 QGTLNVLEAAKRL 90 (91)
Q Consensus 78 ~gt~nlLeaa~~~ 90 (91)
.||.++|++|++.
T Consensus 105 ~gt~~ll~~~~~~ 117 (322)
T PLN02986 105 KGTINVLNTCKET 117 (322)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999863
No 4
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.13 E-value=4e-10 Score=76.99 Aligned_cols=83 Identities=34% Similarity=0.511 Sum_probs=59.5
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHH
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAV 77 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv 77 (91)
|++++|+.++......+... .... ++++++++|++ +. ..+++++|+|||+|++... ...+|..+++++|+
T Consensus 31 V~~~~r~~~~~~~~~~~~~~--~~~~----~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~~~-~~~~~~~~~~~~nv 103 (322)
T PLN02662 31 VKATVRDPNDPKKTEHLLAL--DGAK----ERLHLFKANLLEEGSFDSVVDGCEGVFHTASPFYH-DVTDPQAELIDPAV 103 (322)
T ss_pred EEEEEcCCCchhhHHHHHhc--cCCC----CceEEEeccccCcchHHHHHcCCCEEEEeCCcccC-CCCChHHHHHHHHH
Confidence 56788887654433332110 1111 58899999999 65 7788899999999998643 23455346889999
Q ss_pred HHHHHHHHHHHHc
Q 042773 78 QGTLNVLEAAKRL 90 (91)
Q Consensus 78 ~gt~nlLeaa~~~ 90 (91)
.||.+++++|++.
T Consensus 104 ~gt~~ll~a~~~~ 116 (322)
T PLN02662 104 KGTLNVLRSCAKV 116 (322)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999864
No 5
>PLN02650 dihydroflavonol-4-reductase
Probab=99.08 E-value=6.1e-10 Score=77.40 Aligned_cols=83 Identities=30% Similarity=0.537 Sum_probs=59.8
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHH
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAV 77 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv 77 (91)
|++++|+.++...+..+... ++.. ++++++.+|++ .. .++++++|+|||+|+..+.. ..+|..+++++|+
T Consensus 32 V~~~~r~~~~~~~~~~~~~~--~~~~----~~~~~v~~Dl~d~~~~~~~~~~~d~ViH~A~~~~~~-~~~~~~~~~~~Nv 104 (351)
T PLN02650 32 VRATVRDPANVKKVKHLLDL--PGAT----TRLTLWKADLAVEGSFDDAIRGCTGVFHVATPMDFE-SKDPENEVIKPTV 104 (351)
T ss_pred EEEEEcCcchhHHHHHHHhc--cCCC----CceEEEEecCCChhhHHHHHhCCCEEEEeCCCCCCC-CCCchhhhhhHHH
Confidence 46778887665555443210 1111 36899999999 55 77888999999999976532 2355446889999
Q ss_pred HHHHHHHHHHHHc
Q 042773 78 QGTLNVLEAAKRL 90 (91)
Q Consensus 78 ~gt~nlLeaa~~~ 90 (91)
.||.++|++|++.
T Consensus 105 ~gt~~ll~aa~~~ 117 (351)
T PLN02650 105 NGMLSIMKACAKA 117 (351)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999875
No 6
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.98 E-value=9e-10 Score=81.01 Aligned_cols=80 Identities=21% Similarity=0.113 Sum_probs=62.2
Q ss_pred cCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCC--CCEEEEcccCCCCCCC-cChHHHHHHHHHH
Q 042773 5 IFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEG--CKGVFCVATPRTLEDP-VGLEKELALPAVQ 78 (91)
Q Consensus 5 vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~--~d~V~HlAa~~~~~~~-~~~~~~~~~~nv~ 78 (91)
.||+-|...+...+....++ .++.++-+|+. .+ ..++++ +|+|||.||.-++|.+ .+| .+.+++||.
T Consensus 282 ~~~E~~~~~i~~el~~~~~~------~~~~~~igdVrD~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP-~Eai~tNV~ 354 (588)
T COG1086 282 SRDEYKLYLIDMELREKFPE------LKLRFYIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNP-EEAIKTNVL 354 (588)
T ss_pred cCchHHHHHHHHHHHhhCCC------cceEEEecccccHHHHHHHHhcCCCceEEEhhhhccCcchhcCH-HHHHHHhhH
Confidence 45666665555554332231 57888899999 55 888888 9999999999999865 566 589999999
Q ss_pred HHHHHHHHHHHcC
Q 042773 79 GTLNVLEAAKRLG 91 (91)
Q Consensus 79 gt~nlLeaa~~~g 91 (91)
||.|++++|.++|
T Consensus 355 GT~nv~~aa~~~~ 367 (588)
T COG1086 355 GTENVAEAAIKNG 367 (588)
T ss_pred hHHHHHHHHHHhC
Confidence 9999999999875
No 7
>PLN02427 UDP-apiose/xylose synthase
Probab=98.98 E-value=1.9e-09 Score=75.91 Aligned_cols=83 Identities=10% Similarity=-0.046 Sum_probs=57.9
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCC-CCcChHHHHHHHH
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLE-DPVGLEKELALPA 76 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~-~~~~~~~~~~~~n 76 (91)
|++..|+.++...+..... .... ++++++.+|+. .. ..+++++|+|||+|+..... ...+|. +.+..|
T Consensus 42 V~~l~r~~~~~~~l~~~~~---~~~~----~~~~~~~~Dl~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~-~~~~~n 113 (386)
T PLN02427 42 VLALDVYNDKIKHLLEPDT---VPWS----GRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPL-DTIYSN 113 (386)
T ss_pred EEEEecCchhhhhhhcccc---ccCC----CCeEEEEcCCCChHHHHHHhhcCCEEEEcccccChhhhhhChH-HHHHHH
Confidence 4566666655444433210 0111 47999999999 55 77888999999999976542 234554 667889
Q ss_pred HHHHHHHHHHHHHcC
Q 042773 77 VQGTLNVLEAAKRLG 91 (91)
Q Consensus 77 v~gt~nlLeaa~~~g 91 (91)
+.|+.++|++|++.|
T Consensus 114 ~~gt~~ll~aa~~~~ 128 (386)
T PLN02427 114 FIDALPVVKYCSENN 128 (386)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998754
No 8
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.98 E-value=1.4e-09 Score=75.41 Aligned_cols=60 Identities=13% Similarity=0.243 Sum_probs=48.5
Q ss_pred CCeEEEecCcc-cc---ccccCCCCEEEEcccCCCCCC-CcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-NG---RFTVEGCKGVFCVATPRTLED-PVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~---~~~~~~~d~V~HlAa~~~~~~-~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
++++++++|+. +. .++++++|+|||+|+...... ..+|. ..++.|+.||++++++|++.|
T Consensus 46 ~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~-~~~~~n~~~~~~ll~aa~~~~ 110 (347)
T PRK11908 46 PRMHFFEGDITINKEWIEYHVKKCDVILPLVAIATPATYVKQPL-RVFELDFEANLPIVRSAVKYG 110 (347)
T ss_pred CCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCChHHhhcCcH-HHHHHHHHHHHHHHHHHHhcC
Confidence 47899999997 43 567789999999999865432 46774 788999999999999998754
No 9
>PLN02214 cinnamoyl-CoA reductase
Probab=98.95 E-value=3.6e-09 Score=73.71 Aligned_cols=77 Identities=30% Similarity=0.451 Sum_probs=57.0
Q ss_pred CeeecCCCCChh--hhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCCCcChHHHHHHH
Q 042773 1 MNAAIFPGSDPS--HLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLEDPVGLEKELALP 75 (91)
Q Consensus 1 ~~~~vr~~~k~~--~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~ 75 (91)
|++++|+.++.. .+..+ .... ++++++++|++ .. .++++++|+|||+|++.. .++ .+++++
T Consensus 37 V~~~~r~~~~~~~~~~~~~-----~~~~----~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~----~~~-~~~~~~ 102 (342)
T PLN02214 37 VKGTVRNPDDPKNTHLREL-----EGGK----ERLILCKADLQDYEALKAAIDGCDGVFHTASPVT----DDP-EQMVEP 102 (342)
T ss_pred EEEEeCCchhhhHHHHHHh-----hCCC----CcEEEEecCcCChHHHHHHHhcCCEEEEecCCCC----CCH-HHHHHH
Confidence 577888866432 22332 1111 46889999999 55 778899999999999752 355 478999
Q ss_pred HHHHHHHHHHHHHHcC
Q 042773 76 AVQGTLNVLEAAKRLG 91 (91)
Q Consensus 76 nv~gt~nlLeaa~~~g 91 (91)
|+.||.+++++|++.|
T Consensus 103 nv~gt~~ll~aa~~~~ 118 (342)
T PLN02214 103 AVNGAKFVINAAAEAK 118 (342)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999998764
No 10
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=98.95 E-value=1.8e-09 Score=75.18 Aligned_cols=60 Identities=17% Similarity=0.117 Sum_probs=49.9
Q ss_pred CCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCC-CcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLED-PVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~-~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
.+++++.+|++ .. ..+++++|+|||+|+..+.+. ..+|. .++++|+.||.|||++|++.|
T Consensus 69 ~~~~~~~~Di~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~-~~~~~Nv~gt~nll~~~~~~~ 132 (348)
T PRK15181 69 SRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPI-ATNSANIDGFLNMLTAARDAH 132 (348)
T ss_pred CceEEEEccCCCHHHHHHHhhCCCEEEECccccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHcC
Confidence 47889999999 54 777889999999999876532 46774 789999999999999999764
No 11
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.94 E-value=1.1e-09 Score=75.44 Aligned_cols=59 Identities=19% Similarity=0.216 Sum_probs=51.9
Q ss_pred CCeEEEecCcc-cc--ccccC--CCCEEEEcccCCCCC-CCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 31 SRLAYWTPTLF-NG--RFTVE--GCKGVFCVATPRTLE-DPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~-~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
|++.|+++||+ .. ..+++ .+|+|+|+|+-++++ +..+| ..+++.|+.||.+|||++++.
T Consensus 51 ~~~~fv~~DI~D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P-~~Fi~TNv~GT~~LLEaar~~ 115 (340)
T COG1088 51 PRYRFVQGDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGP-APFIQTNVVGTYTLLEAARKY 115 (340)
T ss_pred CCceEEeccccCHHHHHHHHHhcCCCeEEEechhccccccccCh-hhhhhcchHHHHHHHHHHHHh
Confidence 69999999999 55 67776 589999999999987 46888 489999999999999999975
No 12
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.90 E-value=4.9e-10 Score=77.14 Aligned_cols=81 Identities=21% Similarity=0.021 Sum_probs=49.8
Q ss_pred ecCCCCChhhhhhhhccCCCCCCCCCCCCeEE----EecCcc-cc--ccccC--CCCEEEEcccCCCCCCC-cChHHHHH
Q 042773 4 AIFPGSDPSHLFCCSYSLAPGTPMCECSRLAY----WTPTLF-NG--RFTVE--GCKGVFCVATPRTLEDP-VGLEKELA 73 (91)
Q Consensus 4 ~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~----v~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~~~-~~~~~~~~ 73 (91)
..||+.+.-.|...+....++ +++.+ +-+|++ .. ..+++ ++|+|||.||.-+++.. .+| .+.+
T Consensus 29 ~d~~E~~l~~l~~~l~~~~~~------~~v~~~~~~vigDvrd~~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p-~eav 101 (293)
T PF02719_consen 29 FDRDENKLYELERELRSRFPD------PKVRFEIVPVIGDVRDKERLNRIFEEYKPDIVFHAAALKHVPLMEDNP-FEAV 101 (293)
T ss_dssp EES-HHHHHHHHHHCHHHC--------TTCEEEEE--CTSCCHHHHHHHHTT--T-SEEEE------HHHHCCCH-HHHH
T ss_pred eCCChhHHHHHHHHHhhcccc------cCcccccCceeecccCHHHHHHHHhhcCCCEEEEChhcCCCChHHhCH-HHHH
Confidence 345555555555544321122 34443 579999 55 77787 89999999999988644 466 5899
Q ss_pred HHHHHHHHHHHHHHHHcC
Q 042773 74 LPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 74 ~~nv~gt~nlLeaa~~~g 91 (91)
++|+.||.|++++|.++|
T Consensus 102 ~tNv~GT~nv~~aa~~~~ 119 (293)
T PF02719_consen 102 KTNVLGTQNVAEAAIEHG 119 (293)
T ss_dssp HHHCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 999999999999999865
No 13
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.87 E-value=2.4e-09 Score=73.90 Aligned_cols=58 Identities=21% Similarity=0.240 Sum_probs=50.5
Q ss_pred eEEEecCcc-cc--ccccC--CCCEEEEcccCCCCC-CCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 33 LAYWTPTLF-NG--RFTVE--GCKGVFCVATPRTLE-DPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 33 ~~~v~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~-~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
..|+++|+. .. ++.|+ .+|.|||+|+...++ ++++|. ++++.|+.||++||++|+++|
T Consensus 46 ~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl-~Yy~NNv~gTl~Ll~am~~~g 109 (329)
T COG1087 46 FKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPL-KYYDNNVVGTLNLIEAMLQTG 109 (329)
T ss_pred CceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHH-HHHhhchHhHHHHHHHHHHhC
Confidence 589999999 55 66665 589999999999886 578996 899999999999999999875
No 14
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.85 E-value=7.9e-09 Score=77.58 Aligned_cols=60 Identities=8% Similarity=0.126 Sum_probs=49.0
Q ss_pred CCeEEEecCcc-cc---ccccCCCCEEEEcccCCCCC-CCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-NG---RFTVEGCKGVFCVATPRTLE-DPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~---~~~~~~~d~V~HlAa~~~~~-~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
++++++.+|++ .. ..+++++|+|||+|+..+.. ...+|. ++++.|+.||.++|++|+++|
T Consensus 360 ~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~-~~~~~Nv~~t~~ll~a~~~~~ 424 (660)
T PRK08125 360 PRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPL-RVFELDFEENLKIIRYCVKYN 424 (660)
T ss_pred CceEEEeccccCcHHHHHHHhcCCCEEEECccccCchhhccCHH-HHHHhhHHHHHHHHHHHHhcC
Confidence 47899999998 54 45678999999999987653 245664 789999999999999999764
No 15
>PLN00198 anthocyanidin reductase; Provisional
Probab=98.85 E-value=1.9e-08 Score=69.55 Aligned_cols=59 Identities=32% Similarity=0.501 Sum_probs=47.1
Q ss_pred CCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 31 SRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
++++++.+|++ .. ..+++++|+|||+|++... ...+|..++++.|+.|+.+++++|++.
T Consensus 59 ~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~ll~a~~~~ 120 (338)
T PLN00198 59 GDLKIFGADLTDEESFEAPIAGCDLVFHVATPVNF-ASEDPENDMIKPAIQGVHNVLKACAKA 120 (338)
T ss_pred CceEEEEcCCCChHHHHHHHhcCCEEEEeCCCCcc-CCCChHHHHHHHHHHHHHHHHHHHHhc
Confidence 36889999999 55 6778899999999997543 234554457899999999999999764
No 16
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.84 E-value=2.9e-08 Score=68.19 Aligned_cols=84 Identities=29% Similarity=0.472 Sum_probs=57.4
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHH
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAV 77 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv 77 (91)
|.+++|+.++......+... .+.. ++++++++|++ .. ..+++++|+|||+|+........++..++++.|+
T Consensus 32 V~~~~r~~~~~~~~~~~~~~--~~~~----~~~~~~~~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~ 105 (325)
T PLN02989 32 INATVRDPKDRKKTDHLLAL--DGAK----ERLKLFKADLLDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAV 105 (325)
T ss_pred EEEEEcCCcchhhHHHHHhc--cCCC----CceEEEeCCCCCchHHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHH
Confidence 34567776654433332210 1111 47899999999 55 7778899999999997654222233357899999
Q ss_pred HHHHHHHHHHHHc
Q 042773 78 QGTLNVLEAAKRL 90 (91)
Q Consensus 78 ~gt~nlLeaa~~~ 90 (91)
.|+.+++++|.+.
T Consensus 106 ~g~~~ll~a~~~~ 118 (325)
T PLN02989 106 NGTINVLRTCTKV 118 (325)
T ss_pred HHHHHHHHHHHHc
Confidence 9999999999763
No 17
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.83 E-value=1.6e-08 Score=69.98 Aligned_cols=60 Identities=18% Similarity=0.202 Sum_probs=49.1
Q ss_pred CCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCC-CcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLED-PVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~-~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
++++++.+|++ .. ..+++++|+|||+|+....+. ..+| .++++.|+.|+.+++++|++.|
T Consensus 53 ~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~-~~~~~~Nv~g~~~ll~aa~~~~ 116 (324)
T TIGR03589 53 PCLRFFIGDVRDKERLTRALRGVDYVVHAAALKQVPAAEYNP-FECIRTNINGAQNVIDAAIDNG 116 (324)
T ss_pred CcEEEEEccCCCHHHHHHHHhcCCEEEECcccCCCchhhcCH-HHHHHHHHHHHHHHHHHHHHcC
Confidence 47889999999 55 777889999999999865432 3466 4789999999999999998753
No 18
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=98.76 E-value=3e-08 Score=68.72 Aligned_cols=60 Identities=22% Similarity=0.209 Sum_probs=47.0
Q ss_pred CCeEEEecCcc-cc--ccccCC--CCEEEEcccCCCCC-CCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-NG--RFTVEG--CKGVFCVATPRTLE-DPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~~--~d~V~HlAa~~~~~-~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
.+++++++|++ .. .+++++ +|+|||+|+..+.. ...++ ...++.|+.||.+++++|+++|
T Consensus 55 ~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~-~~~~~~n~~gt~~ll~a~~~~~ 120 (343)
T TIGR01472 55 ARMKLHYGDLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIP-EYTADVDGIGTLRLLEAVRTLG 120 (343)
T ss_pred cceeEEEeccCCHHHHHHHHHhCCCCEEEECCcccccchhhhCh-HHHHHHHHHHHHHHHHHHHHhC
Confidence 46899999999 54 666764 69999999987653 23455 3678899999999999998753
No 19
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.75 E-value=2e-08 Score=69.10 Aligned_cols=72 Identities=18% Similarity=0.078 Sum_probs=53.3
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHH
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAV 77 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv 77 (91)
||+.+|+.++...+.. .+++++.+|+. +. ..+++|+|+|||+++... .++. .+.+.|+
T Consensus 27 V~~l~R~~~~~~~l~~--------------~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~----~~~~-~~~~~~~ 87 (317)
T CHL00194 27 VRCLVRNLRKASFLKE--------------WGAELVYGDLSLPETLPPSFKGVTAIIDASTSRP----SDLY-NAKQIDW 87 (317)
T ss_pred EEEEEcChHHhhhHhh--------------cCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCC----CCcc-chhhhhH
Confidence 5778888654322211 37889999999 65 788899999999876421 2442 5678899
Q ss_pred HHHHHHHHHHHHcC
Q 042773 78 QGTLNVLEAAKRLG 91 (91)
Q Consensus 78 ~gt~nlLeaa~~~g 91 (91)
.|+.|++++|+++|
T Consensus 88 ~~~~~l~~aa~~~g 101 (317)
T CHL00194 88 DGKLALIEAAKAAK 101 (317)
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999999865
No 20
>PLN02583 cinnamoyl-CoA reductase
Probab=98.69 E-value=1e-07 Score=65.16 Aligned_cols=58 Identities=26% Similarity=0.386 Sum_probs=46.2
Q ss_pred CCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 31 SRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.+++++++|++ .. ..++.++|+|||++++... ...++ .+++++|+.||.+++++|.+.
T Consensus 57 ~~~~~~~~Dl~d~~~~~~~l~~~d~v~~~~~~~~~-~~~~~-~~~~~~nv~gt~~ll~aa~~~ 117 (297)
T PLN02583 57 ERLKVFDVDPLDYHSILDALKGCSGLFCCFDPPSD-YPSYD-EKMVDVEVRAAHNVLEACAQT 117 (297)
T ss_pred CceEEEEecCCCHHHHHHHHcCCCEEEEeCccCCc-ccccH-HHHHHHHHHHHHHHHHHHHhc
Confidence 47899999999 55 7788999999998866532 12234 478999999999999999864
No 21
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=98.68 E-value=7.9e-08 Score=66.93 Aligned_cols=81 Identities=30% Similarity=0.459 Sum_probs=55.2
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCC---CcChH----H
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLED---PVGLE----K 70 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~---~~~~~----~ 70 (91)
|+++.|+.++.+.+...+ .. . ++++++.+|+. .. .++++++|+|||+|+..+... ..++. .
T Consensus 37 V~~~~r~~~~~~~~~~~~----~~-~----~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~ 107 (353)
T PLN02896 37 VHATLRDPAKSLHLLSKW----KE-G----DRLRLFRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQS 107 (353)
T ss_pred EEEEeCChHHHHHHHHhh----cc-C----CeEEEEECCCCCHHHHHHHHcCCCEEEECCccccCCccccccchhhhhhH
Confidence 456778766655444332 11 1 47899999999 55 777788999999999865421 12442 1
Q ss_pred HHHHHHHHHHHHHHHHHHHc
Q 042773 71 ELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 71 ~~~~~nv~gt~nlLeaa~~~ 90 (91)
.++++|+.|+.+||++|++.
T Consensus 108 n~~~~~~~g~~~ll~~~~~~ 127 (353)
T PLN02896 108 KVIDPAIKGTLNVLKSCLKS 127 (353)
T ss_pred HhHHHHHHHHHHHHHHHHhc
Confidence 23455679999999999865
No 22
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.64 E-value=2.2e-08 Score=66.96 Aligned_cols=56 Identities=23% Similarity=0.191 Sum_probs=36.8
Q ss_pred CCeEEEecCcc-cc--------ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--------RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--------~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
++++++.+|++ +. ..+.+.+|.|||+|+..+.. .+..++.+.||.||.+|++.|.+
T Consensus 60 ~ri~~v~GDl~~~~lGL~~~~~~~L~~~v~~IiH~Aa~v~~~---~~~~~~~~~NV~gt~~ll~la~~ 124 (249)
T PF07993_consen 60 SRIEVVEGDLSQPNLGLSDEDYQELAEEVDVIIHCAASVNFN---APYSELRAVNVDGTRNLLRLAAQ 124 (249)
T ss_dssp TTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE--SS-SBS----S--EEHHHHHHHHHHHHHHHTS
T ss_pred ccEEEEeccccccccCCChHHhhccccccceeeecchhhhhc---ccchhhhhhHHHHHHHHHHHHHh
Confidence 79999999999 54 22335799999999998752 23346788999999999999974
No 23
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.63 E-value=1.1e-07 Score=68.61 Aligned_cols=58 Identities=22% Similarity=0.277 Sum_probs=45.9
Q ss_pred CCeEEEecCccccccccCCCCEEEEcccCCCCCC-CcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLFNGRFTVEGCKGVFCVATPRTLED-PVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~~~~~~~~~~d~V~HlAa~~~~~~-~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
++++++.+|+. +..+.++|+|||+|+...... ..+| .++++.|+.||.+|+++|+++|
T Consensus 168 ~~~~~~~~Di~--~~~~~~~D~ViHlAa~~~~~~~~~~p-~~~~~~Nv~gT~nLleaa~~~g 226 (436)
T PLN02166 168 PRFELIRHDVV--EPILLEVDQIYHLACPASPVHYKYNP-VKTIKTNVMGTLNMLGLAKRVG 226 (436)
T ss_pred CceEEEECccc--cccccCCCEEEECceeccchhhccCH-HHHHHHHHHHHHHHHHHHHHhC
Confidence 47888888888 334568999999999875432 2466 4889999999999999998764
No 24
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.63 E-value=9.3e-08 Score=69.11 Aligned_cols=58 Identities=21% Similarity=0.256 Sum_probs=46.1
Q ss_pred CCeEEEecCccccccccCCCCEEEEcccCCCCCC-CcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLFNGRFTVEGCKGVFCVATPRTLED-PVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~~~~~~~~~~d~V~HlAa~~~~~~-~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
++++++.+|+. +..+.++|+|||+|+...... ..+| .++++.|+.||.+||++|++.|
T Consensus 167 ~~~~~i~~D~~--~~~l~~~D~ViHlAa~~~~~~~~~~p-~~~~~~Nv~gt~nLleaa~~~g 225 (442)
T PLN02206 167 PNFELIRHDVV--EPILLEVDQIYHLACPASPVHYKFNP-VKTIKTNVVGTLNMLGLAKRVG 225 (442)
T ss_pred CceEEEECCcc--ChhhcCCCEEEEeeeecchhhhhcCH-HHHHHHHHHHHHHHHHHHHHhC
Confidence 47888999988 334567999999999876432 3466 4789999999999999998764
No 25
>PLN02686 cinnamoyl-CoA reductase
Probab=98.57 E-value=1e-07 Score=67.10 Aligned_cols=87 Identities=20% Similarity=0.153 Sum_probs=56.7
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHH
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAV 77 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv 77 (91)
|++++|+.++...+..+... .... ..-++++++++|++ .. .++++++|+|||+|+.............+.+.|+
T Consensus 80 V~~~~r~~~~~~~l~~l~~~--~~~~-~~~~~~~~v~~Dl~d~~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv 156 (367)
T PLN02686 80 VRIAVDTQEDKEKLREMEMF--GEMG-RSNDGIWTVMANLTEPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEA 156 (367)
T ss_pred EEEEeCCHHHHHHHHHHhhh--cccc-ccCCceEEEEcCCCCHHHHHHHHHhccEEEecCeeecccccccccchhhhhhH
Confidence 46678887655555443210 0000 00036889999999 55 7778899999999998754221111124567899
Q ss_pred HHHHHHHHHHHHc
Q 042773 78 QGTLNVLEAAKRL 90 (91)
Q Consensus 78 ~gt~nlLeaa~~~ 90 (91)
.||.+++++|++.
T Consensus 157 ~gt~~llea~~~~ 169 (367)
T PLN02686 157 KASENVIEACVRT 169 (367)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999864
No 26
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.52 E-value=3e-07 Score=62.70 Aligned_cols=57 Identities=30% Similarity=0.341 Sum_probs=46.8
Q ss_pred CeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 32 RLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
+++++.+|+. .. .++++++|+|||+|+.... ...++ ..+++.|+.|+.+++++|++.
T Consensus 44 ~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~-~~~~~-~~~~~~n~~~~~~l~~~~~~~ 103 (328)
T TIGR03466 44 DVEIVEGDLRDPASLRKAVAGCRALFHVAADYRL-WAPDP-EEMYAANVEGTRNLLRAALEA 103 (328)
T ss_pred CceEEEeeCCCHHHHHHHHhCCCEEEEeceeccc-CCCCH-HHHHHHHHHHHHHHHHHHHHh
Confidence 6889999999 55 7778899999999987543 23455 478999999999999999865
No 27
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.49 E-value=3.2e-07 Score=66.25 Aligned_cols=61 Identities=18% Similarity=0.118 Sum_probs=45.7
Q ss_pred CCeEEEecCcc-cc--ccccC--CCCEEEEcccCCCCCC-CcChH--HHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-NG--RFTVE--GCKGVFCVATPRTLED-PVGLE--KELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~~-~~~~~--~~~~~~nv~gt~nlLeaa~~~g 91 (91)
.+++++++|++ .. ..+++ ++|+|||+|+..+.+. ..+|. ..+++.|+.||.|+|++|++.|
T Consensus 113 ~~v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g 181 (442)
T PLN02572 113 KEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA 181 (442)
T ss_pred CcceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 36889999999 55 66666 5899999998765432 23331 3457899999999999998754
No 28
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.47 E-value=4.4e-07 Score=61.44 Aligned_cols=58 Identities=26% Similarity=0.312 Sum_probs=46.0
Q ss_pred CeEEEecCcc-cc--ccccCCC-CEEEEcccCCCCCCC-c-ChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 32 RLAYWTPTLF-NG--RFTVEGC-KGVFCVATPRTLEDP-V-GLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~~~~-d~V~HlAa~~~~~~~-~-~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
+++++.+|+. .+ ...++++ |+|||+|+....... . +| .+++..|+.||.+++++|++.
T Consensus 43 ~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~~~~~~~-~~~~~~nv~gt~~ll~aa~~~ 106 (314)
T COG0451 43 GVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDSNASDP-AEFLDVNVDGTLNLLEAARAA 106 (314)
T ss_pred ccceeeecccchHHHHHHHhcCCCEEEEccccCchhhhhhhCH-HHHHHHHHHHHHHHHHHHHHc
Confidence 5788899988 55 6666777 999999999875422 1 34 468999999999999999874
No 29
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.44 E-value=7.8e-07 Score=61.89 Aligned_cols=59 Identities=20% Similarity=0.183 Sum_probs=45.8
Q ss_pred CCeEEEecCcc-cc--ccccCC--CCEEEEcccCCCCC-CCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 31 SRLAYWTPTLF-NG--RFTVEG--CKGVFCVATPRTLE-DPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~~--~d~V~HlAa~~~~~-~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.+++++.+|++ .. ..++++ +|+|||+|+..... ...+|. ..++.|+.|+.+++++|++.
T Consensus 52 ~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~N~~g~~~ll~a~~~~ 116 (349)
T TIGR02622 52 KKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPL-ETFETNVMGTVNLLEAIRAI 116 (349)
T ss_pred CCceEEEccCCCHHHHHHHHhhcCCCEEEECCcccccccchhCHH-HHHHHhHHHHHHHHHHHHhc
Confidence 36788999999 54 566654 69999999975443 235664 78999999999999999764
No 30
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=98.43 E-value=2.2e-07 Score=64.82 Aligned_cols=60 Identities=17% Similarity=0.096 Sum_probs=51.6
Q ss_pred CCeEEEecCcc-cc--ccccC--CCCEEEEcccCCCCC-CCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-NG--RFTVE--GCKGVFCVATPRTLE-DPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~-~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
..+.|+++|++ .. ++.++ ..|.|+|+|+....+ +.++|. .++.+|+.||.|+||++++++
T Consensus 54 ~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~-~Y~~nNi~gtlnlLe~~~~~~ 119 (343)
T KOG1371|consen 54 KSVFFVEGDLNDAEALEKLFSEVKFDAVMHFAALAAVGESMENPL-SYYHNNIAGTLNLLEVMKAHN 119 (343)
T ss_pred CceEEEEeccCCHHHHHHHHhhcCCceEEeehhhhccchhhhCch-hheehhhhhHHHHHHHHHHcC
Confidence 58999999999 43 77765 579999999998876 478985 899999999999999999875
No 31
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.40 E-value=5e-07 Score=61.89 Aligned_cols=56 Identities=13% Similarity=0.050 Sum_probs=43.7
Q ss_pred EEecCcc-cc--ccccC--CCCEEEEcccCCCCCC-CcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 35 YWTPTLF-NG--RFTVE--GCKGVFCVATPRTLED-PVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 35 ~v~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~~-~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
++.+|++ .. .++++ ++|+|||+|+....+. ..+| ...+..|+.||.+|+++|++.|
T Consensus 35 ~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~-~~~~~~N~~~~~~l~~aa~~~g 96 (299)
T PRK09987 35 DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVDKAESEP-EFAQLLNATSVEAIAKAANEVG 96 (299)
T ss_pred cccCCCCCHHHHHHHHHhcCCCEEEECCccCCcchhhcCH-HHHHHHHHHHHHHHHHHHHHcC
Confidence 3457888 54 56666 5899999999987643 3566 4678999999999999998764
No 32
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.40 E-value=9e-07 Score=66.50 Aligned_cols=60 Identities=18% Similarity=0.260 Sum_probs=47.6
Q ss_pred CCeEEEecCcc-cc--cccc--CCCCEEEEcccCCCCCC-CcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-NG--RFTV--EGCKGVFCVATPRTLED-PVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~--~~~d~V~HlAa~~~~~~-~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
++++++.+|+. .. ...+ .++|+|||+|+...... ..++ .++++.|+.||.+++++|++.|
T Consensus 57 ~~v~~~~~Dl~d~~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~-~~~~~~Nv~gt~~ll~a~~~~~ 122 (668)
T PLN02260 57 PNFKFVKGDIASADLVNYLLITEGIDTIMHFAAQTHVDNSFGNS-FEFTKNNIYGTHVLLEACKVTG 122 (668)
T ss_pred CCeEEEECCCCChHHHHHHHhhcCCCEEEECCCccCchhhhhCH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 58999999999 55 4443 57999999999876532 3455 4788999999999999998753
No 33
>PLN02503 fatty acyl-CoA reductase 2
Probab=98.39 E-value=1.2e-06 Score=65.77 Aligned_cols=57 Identities=12% Similarity=0.071 Sum_probs=46.0
Q ss_pred CCeEEEecCcc-cc--------ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 31 SRLAYWTPTLF-NG--------RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--------~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.++.++.+|++ +. +.+.+++|+|||+|+..... .++ +..++.|+.||.+++++|++.
T Consensus 192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~--~~~-~~a~~vNV~GT~nLLelA~~~ 257 (605)
T PLN02503 192 SKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD--ERY-DVAIDINTRGPCHLMSFAKKC 257 (605)
T ss_pred ccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccc--cCH-HHHHHHHHHHHHHHHHHHHHc
Confidence 58899999999 62 33346799999999998652 345 578999999999999999864
No 34
>PLN02996 fatty acyl-CoA reductase
Probab=98.39 E-value=1.2e-06 Score=64.16 Aligned_cols=57 Identities=16% Similarity=0.077 Sum_probs=46.2
Q ss_pred CCeEEEecCcc-cc---------ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 31 SRLAYWTPTLF-NG---------RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~---------~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
++++++.+|++ +. ..+++++|+|||+|+..... .++ ...++.|+.||.+||++|++.
T Consensus 84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~--~~~-~~~~~~Nv~gt~~ll~~a~~~ 150 (491)
T PLN02996 84 EKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFD--ERY-DVALGINTLGALNVLNFAKKC 150 (491)
T ss_pred cCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCc--CCH-HHHHHHHHHHHHHHHHHHHhc
Confidence 58899999998 52 23457899999999988652 355 578999999999999999864
No 35
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.37 E-value=8.4e-07 Score=60.05 Aligned_cols=59 Identities=17% Similarity=0.176 Sum_probs=47.5
Q ss_pred CCeEEEecCcc-cc--ccccCC--CCEEEEcccCCCCCC-CcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 31 SRLAYWTPTLF-NG--RFTVEG--CKGVFCVATPRTLED-PVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~~--~d~V~HlAa~~~~~~-~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
++++++.+|+. ++ .+++++ +|+|||+|+...... ..++ ..+++.|+.|+.+++++|++.
T Consensus 50 ~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~ 114 (317)
T TIGR01181 50 PRYRFVKGDIGDRELVSRLFTEHQPDAVVHFAAESHVDRSISGP-AAFIETNVVGTYTLLEAVRKY 114 (317)
T ss_pred CCcEEEEcCCcCHHHHHHHHhhcCCCEEEEcccccCchhhhhCH-HHHHHHHHHHHHHHHHHHHhc
Confidence 47889999999 65 677776 899999999875432 3455 478999999999999999864
No 36
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.37 E-value=9e-07 Score=61.44 Aligned_cols=58 Identities=19% Similarity=0.223 Sum_probs=46.3
Q ss_pred CCeEEEecCcc-cc--ccccC--CCCEEEEcccCCCCC-CCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE--GCKGVFCVATPRTLE-DPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~-~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.+++++.+|++ .. ..+++ ++|+|||+|+..... ...++ .++++.|+.||.+++++|++
T Consensus 51 ~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~-~~~~~~N~~gt~~ll~a~~~ 114 (355)
T PRK10217 51 ERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGP-AAFIETNIVGTYTLLEAARA 114 (355)
T ss_pred CceEEEECCCcChHHHHHHHhhcCCCEEEECCcccCcchhhhCh-HHHHHHhhHHHHHHHHHHHH
Confidence 36889999999 55 66676 489999999987653 23455 58899999999999999975
No 37
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=98.32 E-value=7.2e-07 Score=63.18 Aligned_cols=59 Identities=27% Similarity=0.261 Sum_probs=48.1
Q ss_pred CCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCC-CcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLED-PVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~-~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
.+++++.+|+. .. ..++.++ .|+|+|+...... ..++ +.+++.||.||.|++++|++.|
T Consensus 55 ~~v~~~~~D~~~~~~i~~a~~~~-~Vvh~aa~~~~~~~~~~~-~~~~~vNV~gT~nvi~~c~~~~ 117 (361)
T KOG1430|consen 55 GRVTVILGDLLDANSISNAFQGA-VVVHCAASPVPDFVENDR-DLAMRVNVNGTLNVIEACKELG 117 (361)
T ss_pred CceeEEecchhhhhhhhhhccCc-eEEEeccccCccccccch-hhheeecchhHHHHHHHHHHhC
Confidence 68999999999 44 8888999 7888877665533 3466 4889999999999999999875
No 38
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.32 E-value=1e-06 Score=61.10 Aligned_cols=58 Identities=17% Similarity=0.222 Sum_probs=45.9
Q ss_pred CCeEEEecCcc-cc--ccccC--CCCEEEEcccCCCCCC-CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE--GCKGVFCVATPRTLED-PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~~-~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.+++++.+|++ .. ..+++ ++|+|||+|+....+. ..++ .+++++|+.||.+++++|++
T Consensus 50 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~-~~~~~~N~~gt~~ll~~~~~ 113 (352)
T PRK10084 50 ERYVFEHADICDRAELDRIFAQHQPDAVMHLAAESHVDRSITGP-AAFIETNIVGTYVLLEAARN 113 (352)
T ss_pred CceEEEEecCCCHHHHHHHHHhcCCCEEEECCcccCCcchhcCc-hhhhhhhhHHHHHHHHHHHH
Confidence 36788999999 54 66665 4899999999865432 3455 57899999999999999985
No 39
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=98.31 E-value=1.1e-06 Score=60.89 Aligned_cols=60 Identities=20% Similarity=0.132 Sum_probs=46.5
Q ss_pred CCeEEEecCcc-cc--ccccC--CCCEEEEcccCCCCCC-CcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-NG--RFTVE--GCKGVFCVATPRTLED-PVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~~-~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
.+++++++|++ .. ..+++ .+|+|||+|+..+... ..+| ...++.|+.||.+++++|++++
T Consensus 60 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~-~~~~~~N~~gt~~ll~~~~~~~ 125 (340)
T PLN02653 60 ARMKLHYGDLSDASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMP-DYTADVVATGALRLLEAVRLHG 125 (340)
T ss_pred CceEEEEecCCCHHHHHHHHHHcCCCEEEECCcccchhhhhhCh-hHHHHHHHHHHHHHHHHHHHhc
Confidence 36889999999 54 55665 4699999999875532 3455 4678999999999999998653
No 40
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.26 E-value=5.5e-07 Score=62.17 Aligned_cols=83 Identities=19% Similarity=0.088 Sum_probs=58.9
Q ss_pred CeeecCCCCCh--hhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC--CCCEEEEcccCCCCC-CCcChHHHH
Q 042773 1 MNAAIFPGSDP--SHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE--GCKGVFCVATPRTLE-DPVGLEKEL 72 (91)
Q Consensus 1 ~~~~vr~~~k~--~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~-~~~~~~~~~ 72 (91)
|++++|-.+.. ... .++.. +...+ +++.++.+|++ .. ..+++ ..|-|||||+.+.++ +..+|. ..
T Consensus 29 VhGi~Rrss~~n~~ri-~L~~~--~~~~~---~~l~l~~gDLtD~~~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~-~T 101 (345)
T COG1089 29 VHGIKRRSSSFNTPRI-HLYED--PHLND---PRLHLHYGDLTDSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPE-YT 101 (345)
T ss_pred EEEEeeccccCCcccc-eeccc--cccCC---ceeEEEeccccchHHHHHHHHhcCchhheeccccccccccccCcc-ee
Confidence 56777763322 222 34332 33221 57899999999 44 55555 469999999999887 468885 88
Q ss_pred HHHHHHHHHHHHHHHHHc
Q 042773 73 ALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 73 ~~~nv~gt~nlLeaa~~~ 90 (91)
.+++-.||++|||+.+..
T Consensus 102 ~~~~~iGtlrlLEaiR~~ 119 (345)
T COG1089 102 ADVDAIGTLRLLEAIRIL 119 (345)
T ss_pred eeechhHHHHHHHHHHHh
Confidence 999999999999999864
No 41
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.23 E-value=4.8e-06 Score=57.23 Aligned_cols=57 Identities=21% Similarity=0.072 Sum_probs=44.3
Q ss_pred CCeEEEecCcc-cc--------ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 31 SRLAYWTPTLF-NG--------RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--------~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
++++++.+|+. +. .....++|.|||+|+.... ..+...+.+.|+.|+.+++++|.+.
T Consensus 61 ~~v~~~~~D~~~~~~gl~~~~~~~~~~~~d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~ 126 (367)
T TIGR01746 61 ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASG 126 (367)
T ss_pred CCEEEEeCCcCcccCCcCHHHHHHHHhhCCEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhC
Confidence 47999999987 42 3345689999999998753 2334577889999999999999865
No 42
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.21 E-value=4.2e-06 Score=62.40 Aligned_cols=87 Identities=14% Similarity=0.089 Sum_probs=59.1
Q ss_pred CeeecCCCCChhhhhhhhccCC---CCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCCCcChHHHHHH
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLA---PGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLEDPVGLEKELAL 74 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~---~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~ 74 (91)
|++.+|+.++.+.+.+.+.... .+.. ...+++++++|+. .+ ..++.++|+|||+|+.... ...++ ...++
T Consensus 107 Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~--~~~~v~iV~gDLtD~esI~~aLggiDiVVn~AG~~~~-~v~d~-~~~~~ 182 (576)
T PLN03209 107 VRAGVRSAQRAESLVQSVKQMKLDVEGTQ--PVEKLEIVECDLEKPDQIGPALGNASVVICCIGASEK-EVFDV-TGPYR 182 (576)
T ss_pred EEEEeCCHHHHHHHHHHhhhhcccccccc--ccCceEEEEecCCCHHHHHHHhcCCCEEEEccccccc-cccch-hhHHH
Confidence 5778899887665544321100 0100 0136889999999 55 7778899999999987542 12244 35688
Q ss_pred HHHHHHHHHHHHHHHcC
Q 042773 75 PAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 75 ~nv~gt~nlLeaa~~~g 91 (91)
.|+.|+.+++++|++.|
T Consensus 183 VN~~Gt~nLl~Aa~~ag 199 (576)
T PLN03209 183 IDYLATKNLVDAATVAK 199 (576)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 99999999999998653
No 43
>PLN02778 3,5-epimerase/4-reductase
Probab=98.18 E-value=4e-06 Score=57.62 Aligned_cols=58 Identities=19% Similarity=0.174 Sum_probs=41.4
Q ss_pred eEEEecCcc-cc--ccccC--CCCEEEEcccCCCCCC----CcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 33 LAYWTPTLF-NG--RFTVE--GCKGVFCVATPRTLED----PVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 33 ~~~v~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~~----~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
+.+...|+. .. ...+. ++|+|||+|+..+.+. ..+| .++++.|+.||.+|+++|++.|
T Consensus 36 V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p-~~~~~~Nv~gt~~ll~aa~~~g 102 (298)
T PLN02778 36 FHYGSGRLENRASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHK-VETIRANVVGTLTLADVCRERG 102 (298)
T ss_pred EEEecCccCCHHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCH-HHHHHHHHHHHHHHHHHHHHhC
Confidence 333445665 32 33343 6899999999886421 2466 4889999999999999999764
No 44
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.16 E-value=5.7e-06 Score=58.37 Aligned_cols=59 Identities=19% Similarity=0.093 Sum_probs=44.8
Q ss_pred CeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCC--CcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 32 RLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLED--PVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~--~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
..+++.+|++ .. ..++.++|+|||+|+..+... ..++. ..+..|+.++.||+++|++.|
T Consensus 65 ~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~-~~~~~N~~~t~nll~aa~~~~ 128 (370)
T PLN02695 65 CHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHS-VIMYNNTMISFNMLEAARING 128 (370)
T ss_pred cceEEECCCCCHHHHHHHHhCCCEEEEcccccCCccccccCch-hhHHHHHHHHHHHHHHHHHhC
Confidence 3578889999 54 566788999999999764221 23453 567889999999999998754
No 45
>PLN02240 UDP-glucose 4-epimerase
Probab=98.15 E-value=6.8e-06 Score=56.87 Aligned_cols=60 Identities=17% Similarity=0.147 Sum_probs=46.8
Q ss_pred CCeEEEecCcc-cc--ccccC--CCCEEEEcccCCCCC-CCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-NG--RFTVE--GCKGVFCVATPRTLE-DPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~-~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
.+++++.+|+. .. ..+++ ++|+|||+|+..... ...++ ..+++.|+.++.+++++|++.|
T Consensus 58 ~~~~~~~~D~~~~~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~ 123 (352)
T PLN02240 58 DNLVFHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKP-LLYYDNNLVGTINLLEVMAKHG 123 (352)
T ss_pred ccceEEecCcCCHHHHHHHHHhCCCCEEEEccccCCccccccCH-HHHHHHHHHHHHHHHHHHHHcC
Confidence 47889999999 55 55554 689999999976432 23466 4789999999999999998753
No 46
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.13 E-value=1.1e-05 Score=60.07 Aligned_cols=58 Identities=26% Similarity=0.227 Sum_probs=44.5
Q ss_pred CCeEEEecCcc-cc-------ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-NG-------RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~-------~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
++++++.+|+. +. ...++++|+|||+|+..... .++ .+..+.|+.||.+++++|++.|
T Consensus 51 ~~v~~~~~Dl~~~~~~~~~~~~~~l~~~D~Vih~Aa~~~~~--~~~-~~~~~~nv~gt~~ll~~a~~~~ 116 (657)
T PRK07201 51 DRVVPLVGDLTEPGLGLSEADIAELGDIDHVVHLAAIYDLT--ADE-EAQRAANVDGTRNVVELAERLQ 116 (657)
T ss_pred CcEEEEecccCCccCCcCHHHHHHhcCCCEEEECceeecCC--CCH-HHHHHHHhHHHHHHHHHHHhcC
Confidence 47899999998 42 11237899999999987542 233 4678999999999999998753
No 47
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.12 E-value=2.4e-06 Score=55.64 Aligned_cols=59 Identities=25% Similarity=0.228 Sum_probs=46.7
Q ss_pred CeEEEecCcc-cc--ccccCCC--CEEEEcccCCCCC-CCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 32 RLAYWTPTLF-NG--RFTVEGC--KGVFCVATPRTLE-DPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~~~~--d~V~HlAa~~~~~-~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
+++++.+|+. .. ++++++. |+|||+|+....+ ...++ .++++.|+.++.++|++|++.|
T Consensus 43 ~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~ 107 (236)
T PF01370_consen 43 NVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPESFEDP-EEIIEANVQGTRNLLEAAREAG 107 (236)
T ss_dssp TEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEeeccccccccccccccCceEEEEeecccccccccccc-cccccccccccccccccccccc
Confidence 7889999999 54 6777655 9999999986421 23455 4789999999999999999754
No 48
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.08 E-value=1.2e-05 Score=55.31 Aligned_cols=60 Identities=13% Similarity=0.096 Sum_probs=46.1
Q ss_pred CCeEEEecCcc-cc--ccccC--CCCEEEEcccCCCCC-CCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-NG--RFTVE--GCKGVFCVATPRTLE-DPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~-~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
.++.++.+|+. .. ..+++ ++|+|||+|+..... ...++ .++++.|+.++.+++++|++.|
T Consensus 50 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~ 115 (338)
T PRK10675 50 KHPTFVEGDIRNEALLTEILHDHAIDTVIHFAGLKAVGESVQKP-LEYYDNNVNGTLRLISAMRAAN 115 (338)
T ss_pred CCceEEEccCCCHHHHHHHHhcCCCCEEEECCccccccchhhCH-HHHHHHHHHHHHHHHHHHHHcC
Confidence 35778899999 55 55554 689999999876532 23455 4789999999999999998764
No 49
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.02 E-value=8.9e-06 Score=55.07 Aligned_cols=55 Identities=18% Similarity=-0.011 Sum_probs=41.5
Q ss_pred EecCcc-cc--ccccC--CCCEEEEcccCCCCC--CCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 36 WTPTLF-NG--RFTVE--GCKGVFCVATPRTLE--DPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 36 v~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~--~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
..+|+. .. +..++ ++|+|||+|+..+.. ...+| .++++.|+.|+.+|+++|+++|
T Consensus 31 ~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~ 92 (306)
T PLN02725 31 KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHANMTYP-ADFIRENLQIQTNVIDAAYRHG 92 (306)
T ss_pred ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchhhhCc-HHHHHHHhHHHHHHHHHHHHcC
Confidence 467888 54 55555 579999999986531 13456 4789999999999999998764
No 50
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.01 E-value=1.4e-06 Score=60.30 Aligned_cols=58 Identities=21% Similarity=0.279 Sum_probs=47.4
Q ss_pred CCeEEEecCccccccccCCCCEEEEcccCCCCCC-CcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLFNGRFTVEGCKGVFCVATPRTLED-PVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~~~~~~~~~~d~V~HlAa~~~~~~-~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
++++++.-|+. .+.+.++|-|||||++.++.. ..+|. .++..|+.||+|+|-.|++-|
T Consensus 75 ~~fel~~hdv~--~pl~~evD~IyhLAapasp~~y~~npv-ktIktN~igtln~lglakrv~ 133 (350)
T KOG1429|consen 75 PNFELIRHDVV--EPLLKEVDQIYHLAAPASPPHYKYNPV-KTIKTNVIGTLNMLGLAKRVG 133 (350)
T ss_pred cceeEEEeech--hHHHHHhhhhhhhccCCCCcccccCcc-ceeeecchhhHHHHHHHHHhC
Confidence 57777777777 556778999999999998763 56775 789999999999999998743
No 51
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.00 E-value=1.9e-05 Score=53.61 Aligned_cols=55 Identities=7% Similarity=-0.063 Sum_probs=40.5
Q ss_pred EEecCcc-cc--cccc----CCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 35 YWTPTLF-NG--RFTV----EGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 35 ~v~~Dl~-~~--~~~~----~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
++.+|+. .. +.+. .++|+|||+|+.... ...++ ...++.|+.|+.+++++|++.+
T Consensus 45 ~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~-~~~~~-~~~~~~n~~~~~~ll~~~~~~~ 106 (314)
T TIGR02197 45 VIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDT-TETDG-EYMMENNYQYSKRLLDWCAEKG 106 (314)
T ss_pred eeeccCcchhHHHHHHhhccCCCCEEEECccccCc-cccch-HHHHHHHHHHHHHHHHHHHHhC
Confidence 4556776 44 3332 479999999997643 23566 4788999999999999998754
No 52
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.98 E-value=2.1e-05 Score=49.76 Aligned_cols=62 Identities=24% Similarity=0.376 Sum_probs=49.2
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHH
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAV 77 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv 77 (91)
|++.+|+++|.+. . ++++++++|+. .. .++++++|.|||++++... + .
T Consensus 25 V~~~~R~~~~~~~---~-------------~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~--------~-----~ 75 (183)
T PF13460_consen 25 VTALVRSPSKAED---S-------------PGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK--------D-----V 75 (183)
T ss_dssp EEEEESSGGGHHH---C-------------TTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT--------H-----H
T ss_pred EEEEecCchhccc---c-------------cccccceeeehhhhhhhhhhhhcchhhhhhhhhcc--------c-----c
Confidence 5788999887654 1 59999999999 65 8889999999999966431 1 7
Q ss_pred HHHHHHHHHHHHcC
Q 042773 78 QGTLNVLEAAKRLG 91 (91)
Q Consensus 78 ~gt~nlLeaa~~~g 91 (91)
..+.+++++|+++|
T Consensus 76 ~~~~~~~~a~~~~~ 89 (183)
T PF13460_consen 76 DAAKNIIEAAKKAG 89 (183)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred cccccccccccccc
Confidence 78889999998764
No 53
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=97.97 E-value=1.8e-05 Score=53.08 Aligned_cols=48 Identities=17% Similarity=0.129 Sum_probs=35.4
Q ss_pred ccccCCCCEEEEcccCCCCC--CCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 44 RFTVEGCKGVFCVATPRTLE--DPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 44 ~~~~~~~d~V~HlAa~~~~~--~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
.+.+.++|+|||+|+..... ...+....+++.|+.++.+++++|+++|
T Consensus 52 ~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~ 101 (292)
T TIGR01777 52 SEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE 101 (292)
T ss_pred hhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC
Confidence 45567899999999975431 1112224678899999999999998764
No 54
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.95 E-value=1.6e-05 Score=56.60 Aligned_cols=56 Identities=21% Similarity=0.128 Sum_probs=42.5
Q ss_pred CCeEEEecCcc-cc--ccccC----CCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-NG--RFTVE----GCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~----~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
++++++.+|++ .+ ..+++ ++|+|||+++.... .. .+.++.|+.++.+++++|++.|
T Consensus 111 ~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~Vi~~aa~~~~----~~-~~~~~vn~~~~~~ll~aa~~~g 173 (390)
T PLN02657 111 PGAEVVFGDVTDADSLRKVLFSEGDPVDVVVSCLASRTG----GV-KDSWKIDYQATKNSLDAGREVG 173 (390)
T ss_pred CCceEEEeeCCCHHHHHHHHHHhCCCCcEEEECCccCCC----CC-ccchhhHHHHHHHHHHHHHHcC
Confidence 57899999999 55 66666 59999998875322 11 1346789999999999998764
No 55
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=97.94 E-value=2.5e-05 Score=53.24 Aligned_cols=41 Identities=7% Similarity=-0.069 Sum_probs=32.7
Q ss_pred CCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 49 GCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 49 ~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
++|+|||+|+..+.. ..++. .+++.|+.+|.+||++|++.|
T Consensus 68 ~~d~Vih~A~~~~~~-~~~~~-~~~~~n~~~t~~ll~~~~~~~ 108 (308)
T PRK11150 68 DIEAIFHEGACSSTT-EWDGK-YMMDNNYQYSKELLHYCLERE 108 (308)
T ss_pred CccEEEECceecCCc-CCChH-HHHHHHHHHHHHHHHHHHHcC
Confidence 689999999865442 23553 679999999999999998764
No 56
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.87 E-value=3.9e-05 Score=51.00 Aligned_cols=80 Identities=11% Similarity=-0.095 Sum_probs=52.2
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCCCc---C
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLEDPV---G 67 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~~~---~ 67 (91)
|.++.|+..+.+.+.+... ... .++.++.+|+. .. ..+++ ++|+|||.|+........ +
T Consensus 28 Vi~~~r~~~~~~~~~~~l~----~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~ 99 (263)
T PRK06181 28 LVLAARNETRLASLAQELA----DHG----GEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTD 99 (263)
T ss_pred EEEEeCCHHHHHHHHHHHH----hcC----CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCC
Confidence 3567787665554444332 111 47888999998 54 33332 689999999976543221 2
Q ss_pred h--HHHHHHHHHHHHHHHHHHHH
Q 042773 68 L--EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 68 ~--~~~~~~~nv~gt~nlLeaa~ 88 (91)
+ ..+.++.|+.|+.++++.+.
T Consensus 100 ~~~~~~~~~~N~~~~~~l~~~~~ 122 (263)
T PRK06181 100 LSVFERVMRVNYLGAVYCTHAAL 122 (263)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHH
Confidence 2 13568999999999999885
No 57
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.84 E-value=2.9e-05 Score=55.31 Aligned_cols=56 Identities=23% Similarity=0.077 Sum_probs=45.4
Q ss_pred CCeEEEecCcc-cc--------ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--------RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--------~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
++++.+.+|+. +. .+..+.+|.|||.||.... ..|+.++..+||.||..+|+.|..
T Consensus 60 ~ri~vv~gDl~e~~lGL~~~~~~~La~~vD~I~H~gA~Vn~---v~pYs~L~~~NVlGT~evlrLa~~ 124 (382)
T COG3320 60 DRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNH---VFPYSELRGANVLGTAEVLRLAAT 124 (382)
T ss_pred ceEEEEecccccccCCCCHHHHHHHhhhcceEEecchhhcc---cCcHHHhcCcchHhHHHHHHHHhc
Confidence 69999999998 54 2333569999999999864 345568889999999999999975
No 58
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=97.83 E-value=6.3e-05 Score=60.32 Aligned_cols=57 Identities=19% Similarity=0.045 Sum_probs=44.0
Q ss_pred CCeEEEecCcc-cc--------ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 31 SRLAYWTPTLF-NG--------RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--------~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.+++++.+|+. +. ..+..++|+|||+|+.... ..+...+...|+.||.++|++|++.
T Consensus 1034 ~~i~~~~gDl~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~ 1099 (1389)
T TIGR03443 1034 SRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHW---VYPYSKLRDANVIGTINVLNLCAEG 1099 (1389)
T ss_pred cceEEEeccCCCccCCcCHHHHHHHHhcCCEEEECCcEecC---ccCHHHHHHhHHHHHHHHHHHHHhC
Confidence 47899999997 42 3344689999999998764 2344456678999999999999864
No 59
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.82 E-value=5.5e-05 Score=50.78 Aligned_cols=74 Identities=16% Similarity=0.078 Sum_probs=49.9
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-----c
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-----V 66 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-----~ 66 (91)
.++.|++++.+.+.... . .+++++.+|++ .. ...+ .++|+|||+|+....... .
T Consensus 30 ~~~~r~~~~~~~~~~~~-------~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~ 98 (276)
T PRK06482 30 AATVRRPDALDDLKARY-------G----DRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDA 98 (276)
T ss_pred EEEeCCHHHHHHHHHhc-------c----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHH
Confidence 45667765544444331 1 47889999999 54 3333 358999999998754321 1
Q ss_pred ChHHHHHHHHHHHHHHHHHHH
Q 042773 67 GLEKELALPAVQGTLNVLEAA 87 (91)
Q Consensus 67 ~~~~~~~~~nv~gt~nlLeaa 87 (91)
++ ...++.|+.|+.++++++
T Consensus 99 ~~-~~~~~~n~~g~~~l~~~~ 118 (276)
T PRK06482 99 QI-RRQIDTNLIGSIQVIRAA 118 (276)
T ss_pred HH-HHHHHHHhHHHHHHHHHH
Confidence 22 367889999999999997
No 60
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=97.81 E-value=4.1e-05 Score=51.52 Aligned_cols=54 Identities=15% Similarity=0.066 Sum_probs=40.3
Q ss_pred ecCcc-cc--ccccCCC--CEEEEcccCCCCCC-CcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 37 TPTLF-NG--RFTVEGC--KGVFCVATPRTLED-PVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 37 ~~Dl~-~~--~~~~~~~--d~V~HlAa~~~~~~-~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
.+|+. .. .++++++ |+|||+|+....+. ..++ ...++.|+.|+.+++++|++.|
T Consensus 33 ~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~ 92 (287)
T TIGR01214 33 QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDGAESDP-EKAFAVNALAPQNLARAAARHG 92 (287)
T ss_pred ccCCCCHHHHHHHHHhCCCCEEEECCccccccccccCH-HHHHHHHHHHHHHHHHHHHHcC
Confidence 36777 44 6667665 99999999875432 2344 4778999999999999998753
No 61
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.78 E-value=4.4e-05 Score=57.54 Aligned_cols=56 Identities=20% Similarity=0.086 Sum_probs=41.8
Q ss_pred EEecCcc-cc--ccccC--CCCEEEEcccCCCCC---C-CcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 35 YWTPTLF-NG--RFTVE--GCKGVFCVATPRTLE---D-PVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 35 ~v~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~---~-~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
+..+|++ .. ...+. ++|+|||+|+.++.+ . ..+| .+.++.|+.||.+|+++|++.|
T Consensus 409 ~~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~-~~~~~~N~~gt~~l~~a~~~~g 473 (668)
T PLN02260 409 YGKGRLEDRSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHK-VETIRANVVGTLTLADVCRENG 473 (668)
T ss_pred eeccccccHHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCH-HHHHHHHhHHHHHHHHHHHHcC
Confidence 4456777 44 44444 689999999988532 1 2466 4889999999999999999865
No 62
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.76 E-value=7e-05 Score=49.14 Aligned_cols=79 Identities=11% Similarity=-0.028 Sum_probs=52.1
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC-----C
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED-----P 65 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~-----~ 65 (91)
|.++.|+.++...+...+.. . . .++.++.+|+. .. ...++ .+|+|||+|+...... .
T Consensus 33 V~~~~r~~~~~~~~~~~l~~---~-~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~ 104 (251)
T PRK12826 33 VIVVDICGDDAAATAELVEA---A-G----GKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDD 104 (251)
T ss_pred EEEEeCCHHHHHHHHHHHHh---c-C----CeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCH
Confidence 45677886654444333211 1 1 46889999999 54 44432 6899999998765411 1
Q ss_pred cChHHHHHHHHHHHHHHHHHHHH
Q 042773 66 VGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 66 ~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++ ...++.|+.++.++++++.
T Consensus 105 ~~~-~~~~~~n~~~~~~l~~~~~ 126 (251)
T PRK12826 105 EQW-ERVIDVNLTGTFLLTQAAL 126 (251)
T ss_pred HHH-HHHHHHhhHHHHHHHHHHH
Confidence 233 4678999999999999874
No 63
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=97.73 E-value=8.3e-05 Score=50.44 Aligned_cols=59 Identities=22% Similarity=0.159 Sum_probs=45.6
Q ss_pred CeEEEecCcc-cc--ccccC--CCCEEEEcccCCCCC-CCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 32 RLAYWTPTLF-NG--RFTVE--GCKGVFCVATPRTLE-DPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~-~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
+++++.+|+. .+ ..+++ ++|+|||+|+..... ...++ .+.++.|+.++.+++++|.+.|
T Consensus 48 ~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~ 112 (328)
T TIGR01179 48 RVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGLIAVGESVQDP-LKYYRNNVVNTLNLLEAMQQTG 112 (328)
T ss_pred ceEEEECCCCCHHHHHHHHHhCCCcEEEECccccCcchhhcCc-hhhhhhhHHHHHHHHHHHHhcC
Confidence 5778899999 55 55654 689999999986542 23455 3678999999999999998753
No 64
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.72 E-value=0.00012 Score=49.30 Aligned_cols=77 Identities=9% Similarity=-0.069 Sum_probs=50.4
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC-CcCh-
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED-PVGL- 68 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~-~~~~- 68 (91)
|.++.|+.++.+.+.... . .++.++.+|++ .+ ..+++ ++|+|||.|+...... ...+
T Consensus 31 V~~~~r~~~~~~~l~~~~-------~----~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~ 99 (277)
T PRK06180 31 VVGTVRSEAARADFEALH-------P----DRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPL 99 (277)
T ss_pred EEEEeCCHHHHHHHHhhc-------C----CCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCH
Confidence 346677766544443321 1 47888999999 54 33333 5899999999864321 1112
Q ss_pred --HHHHHHHHHHHHHHHHHHHH
Q 042773 69 --EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 69 --~~~~~~~nv~gt~nlLeaa~ 88 (91)
...++++|+.|+.++++++.
T Consensus 100 ~~~~~~~~~n~~g~~~l~~~~~ 121 (277)
T PRK06180 100 AEMRRQFEVNVFGAVAMTKAVL 121 (277)
T ss_pred HHHHHHHHHHhHHHHHHHHHHH
Confidence 13568999999999999864
No 65
>PRK12320 hypothetical protein; Provisional
Probab=97.72 E-value=7.9e-05 Score=56.91 Aligned_cols=53 Identities=23% Similarity=0.202 Sum_probs=42.3
Q ss_pred CCeEEEecCcc-cc-ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-NG-RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~-~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
++++++++|+. .. .+++.++|+|||+|+... ..+ ...|+.|+.|++++|++.|
T Consensus 40 ~~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~~----~~~----~~vNv~Gt~nLleAA~~~G 94 (699)
T PRK12320 40 PRVDYVCASLRNPVLQELAGEADAVIHLAPVDT----SAP----GGVGITGLAHVANAAARAG 94 (699)
T ss_pred CCceEEEccCCCHHHHHHhcCCCEEEEcCccCc----cch----hhHHHHHHHHHHHHHHHcC
Confidence 47889999999 66 667789999999998632 122 2479999999999998765
No 66
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.69 E-value=8.6e-05 Score=48.72 Aligned_cols=80 Identities=6% Similarity=-0.093 Sum_probs=52.2
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCCC--cCh
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLEDP--VGL 68 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~~--~~~ 68 (91)
|.++.|+.++..++..... ... .++.++.+|+. .. ..+++ ++|+|||.|+....+.. .++
T Consensus 34 Vi~~~r~~~~~~~~~~~~~----~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~ 105 (239)
T PRK07666 34 VGLLARTEENLKAVAEEVE----AYG----VKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDP 105 (239)
T ss_pred EEEEeCCHHHHHHHHHHHH----HhC----CeEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCH
Confidence 3567787665544433321 111 47889999998 54 44443 68999999987643211 111
Q ss_pred --HHHHHHHHHHHHHHHHHHHH
Q 042773 69 --EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 69 --~~~~~~~nv~gt~nlLeaa~ 88 (91)
..+.++.|+.|+.++++++.
T Consensus 106 ~~~~~~~~~n~~~~~~l~~~~~ 127 (239)
T PRK07666 106 AEWEKIIQVNLMGVYYATRAVL 127 (239)
T ss_pred HHHHHHHHHHhHHHHHHHHHHH
Confidence 24678999999999998876
No 67
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=97.69 E-value=7.5e-05 Score=51.49 Aligned_cols=53 Identities=13% Similarity=0.042 Sum_probs=42.9
Q ss_pred cCcc-cc--ccccC--CCCEEEEcccCCCCCCC-cChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 38 PTLF-NG--RFTVE--GCKGVFCVATPRTLEDP-VGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 38 ~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~~~-~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
.|++ ++ .+.+. ..|.|||+|+++.++.. .+| +..+.+|..|+.||.++|++.|
T Consensus 34 ~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~-e~A~~vNa~~~~~lA~aa~~~g 92 (281)
T COG1091 34 LDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEP-ELAFAVNATGAENLARAAAEVG 92 (281)
T ss_pred ccccChHHHHHHHHhhCCCEEEECccccccccccCCH-HHHHHhHHHHHHHHHHHHHHhC
Confidence 5888 55 55665 46999999999988654 455 5789999999999999999865
No 68
>PRK05865 hypothetical protein; Provisional
Probab=97.65 E-value=0.0001 Score=57.35 Aligned_cols=52 Identities=23% Similarity=0.184 Sum_probs=42.2
Q ss_pred CCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
.+++++.+|+. .. ..+++++|+|||+|+.... .++.|+.||.+++++|++.|
T Consensus 40 ~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~---------~~~vNv~GT~nLLeAa~~~g 94 (854)
T PRK05865 40 SSADFIAADIRDATAVESAMTGADVVAHCAWVRGR---------NDHINIDGTANVLKAMAETG 94 (854)
T ss_pred cCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccc---------hHHHHHHHHHHHHHHHHHcC
Confidence 36789999999 55 7778899999999976421 35789999999999998764
No 69
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=97.64 E-value=1.8e-05 Score=54.70 Aligned_cols=60 Identities=15% Similarity=0.120 Sum_probs=49.4
Q ss_pred CCeEEEecCcc-cc--cccc--CCCCEEEEcccCCCCCC-CcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-NG--RFTV--EGCKGVFCVATPRTLED-PVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~--~~~d~V~HlAa~~~~~~-~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
|+..|+++|+. .. ...+ ..+|.|+|.|+.++... ..+|. ++.+.|+.+|..|||+++..|
T Consensus 57 p~ykfv~~di~~~~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~-~~~~nnil~t~~Lle~~~~sg 122 (331)
T KOG0747|consen 57 PNYKFVEGDIADADLVLYLFETEEIDTVIHFAAQTHVDRSFGDSF-EFTKNNILSTHVLLEAVRVSG 122 (331)
T ss_pred CCceEeeccccchHHHHhhhccCchhhhhhhHhhhhhhhhcCchH-HHhcCCchhhhhHHHHHHhcc
Confidence 79999999999 44 3333 36899999999998763 56775 889999999999999998764
No 70
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.60 E-value=0.00014 Score=48.15 Aligned_cols=78 Identities=9% Similarity=-0.067 Sum_probs=48.4
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCCC-cCh--
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLEDP-VGL-- 68 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~~-~~~-- 68 (91)
..+.|++++...+.+.+.. .. .++.++++|+. .. ..+++ ++|+|||+|+....... ..+
T Consensus 35 ~~~~r~~~~~~~~~~~~~~----~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~ 106 (262)
T PRK13394 35 AIADLNQDGANAVADEINK----AG----GKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFA 106 (262)
T ss_pred EEEeCChHHHHHHHHHHHh----cC----ceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHH
Confidence 4566777665555544322 11 46788999999 44 43332 48999999998643211 111
Q ss_pred -HHHHHHHHHHH----HHHHHHHH
Q 042773 69 -EKELALPAVQG----TLNVLEAA 87 (91)
Q Consensus 69 -~~~~~~~nv~g----t~nlLeaa 87 (91)
...+++.|+.| +.++++++
T Consensus 107 ~~~~~~~~n~~~~~~~~~~~l~~~ 130 (262)
T PRK13394 107 DWKKMQAIHVDGAFLTTKAALKHM 130 (262)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHH
Confidence 23567899999 66666666
No 71
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.58 E-value=0.00016 Score=48.35 Aligned_cols=80 Identities=11% Similarity=-0.145 Sum_probs=51.8
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----C
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----P 65 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~ 65 (91)
|..+.|+.++...+...... .. .++.++.+|++ +. ..++ ..+|+|||.|+...... .
T Consensus 37 Vi~~~r~~~~~~~~~~~l~~----~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~ 108 (263)
T PRK07814 37 VLIAARTESQLDEVAEQIRA----AG----RRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTST 108 (263)
T ss_pred EEEEeCCHHHHHHHHHHHHh----cC----CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCH
Confidence 34567776554444333211 11 47888999999 54 3333 36899999998653321 1
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHH
Q 042773 66 VGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 66 ~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++ ...++.|+.++.++++++..
T Consensus 109 ~~~-~~~~~~n~~~~~~l~~~~~~ 131 (263)
T PRK07814 109 KDL-ADAFTFNVATAHALTVAAVP 131 (263)
T ss_pred HHH-HHHHHhhcHHHHHHHHHHHH
Confidence 233 46789999999999999863
No 72
>PRK09135 pteridine reductase; Provisional
Probab=97.55 E-value=0.00026 Score=46.38 Aligned_cols=57 Identities=12% Similarity=0.019 Sum_probs=41.7
Q ss_pred CeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.+.++.+|++ .. ..+++ ++|+|||+|+...... ..++ +.+++.|+.|+.++++++..
T Consensus 58 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~g~~~l~~~~~~ 129 (249)
T PRK09135 58 SAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQW-DDLFASNLKAPFFLSQAAAP 129 (249)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHhchhHHHHHHHHHH
Confidence 6788999999 44 44443 5799999999754311 1233 46889999999999999863
No 73
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00024 Score=47.20 Aligned_cols=76 Identities=13% Similarity=-0.108 Sum_probs=51.0
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc--------CCCCEEEEcccCCCCCCC-----
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV--------EGCKGVFCVATPRTLEDP----- 65 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~--------~~~d~V~HlAa~~~~~~~----- 65 (91)
..+.|+.++.+.+...+ ++ .++.++.+|+. .. .+++ ..+|+|||.|+.......
T Consensus 29 ~~~~r~~~~~~~~~~~~----~~------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~ 98 (260)
T PRK08267 29 GAYDINEAGLAALAAEL----GA------GNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPL 98 (260)
T ss_pred EEEeCCHHHHHHHHHHh----cC------CceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCH
Confidence 34557766555554432 21 47889999999 44 3333 246999999998643211
Q ss_pred cChHHHHHHHHHHHHHHHHHHHH
Q 042773 66 VGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 66 ~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.+. +.+++.|+.|+.++++++.
T Consensus 99 ~~~-~~~~~~n~~~~~~l~~~~~ 120 (260)
T PRK08267 99 EAH-DRVIDINVKGVLNGAHAAL 120 (260)
T ss_pred HHH-HHHHHHHhHHHHHHHHHHH
Confidence 223 4679999999999998875
No 74
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.53 E-value=0.0001 Score=49.09 Aligned_cols=57 Identities=18% Similarity=0.186 Sum_probs=41.5
Q ss_pred CCeEEEecCcc-c-c--cccc-CCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 31 SRLAYWTPTLF-N-G--RFTV-EGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 31 ~~~~~v~~Dl~-~-~--~~~~-~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
++++++++|+. . . .+.+ .++|.|||.++.... .++. ..++.|+.|+.++++++++.|
T Consensus 62 ~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~~~~---~~~~-~~~~~n~~~~~~ll~a~~~~~ 123 (251)
T PLN00141 62 PSLQIVRADVTEGSDKLVEAIGDDSDAVICATGFRRS---FDPF-APWKVDNFGTVNLVEACRKAG 123 (251)
T ss_pred CceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCCCcC---CCCC-CceeeehHHHHHHHHHHHHcC
Confidence 47899999998 4 2 4556 689999998876431 1222 335678999999999998653
No 75
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.00028 Score=46.61 Aligned_cols=79 Identities=14% Similarity=-0.067 Sum_probs=51.2
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-CCCEEEEcccCCCCCCC-cCh---HHHH
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-GCKGVFCVATPRTLEDP-VGL---EKEL 72 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-~~d~V~HlAa~~~~~~~-~~~---~~~~ 72 (91)
|.+++|+..+...+...... .. .++.++.+|+. .. ..++. ++|+|||.|+....... ..+ ....
T Consensus 29 v~~~~r~~~~~~~~~~~~~~----~~----~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~ 100 (257)
T PRK09291 29 VIAGVQIAPQVTALRAEAAR----RG----LALRVEKLDLTDAIDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVREL 100 (257)
T ss_pred EEEEeCCHHHHHHHHHHHHh----cC----CcceEEEeeCCCHHHHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHH
Confidence 45677887665556554321 11 46888999999 55 55555 79999999997643211 111 1356
Q ss_pred HHHHHHHHHHHHHHH
Q 042773 73 ALPAVQGTLNVLEAA 87 (91)
Q Consensus 73 ~~~nv~gt~nlLeaa 87 (91)
+++|+.|+.++++.+
T Consensus 101 ~~~n~~~~~~~~~~~ 115 (257)
T PRK09291 101 FETNVFGPLELTQGF 115 (257)
T ss_pred HHHHhHHHHHHHHHH
Confidence 788999888776654
No 76
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.52 E-value=0.00015 Score=49.90 Aligned_cols=79 Identities=13% Similarity=-0.066 Sum_probs=51.5
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCC------CC
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLE------DP 65 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~------~~ 65 (91)
..+.|+.++.+.+...+. ... .++.++.+|+. .. ..+++ .+|+|||.|+..... ..
T Consensus 34 ~~~~r~~~~~~~~~~~l~----~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~ 105 (322)
T PRK07453 34 IMACRNLKKAEAAAQELG----IPP----DSYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSP 105 (322)
T ss_pred EEEECCHHHHHHHHHHhh----ccC----CceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCH
Confidence 456677766555444331 111 47889999999 54 33332 489999999975321 11
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHH
Q 042773 66 VGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 66 ~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++ +.++++|+.|+.++++++..
T Consensus 106 ~~~-~~~~~vN~~g~~~l~~~~~~ 128 (322)
T PRK07453 106 QGY-ELSMATNHLGHFLLCNLLLE 128 (322)
T ss_pred HHH-HHHHhHHHHHHHHHHHHHHH
Confidence 233 46789999999999988764
No 77
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=97.50 E-value=0.00037 Score=45.85 Aligned_cols=80 Identities=6% Similarity=-0.035 Sum_probs=51.4
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cc-------ccCCCCEEEEcccCCCCCC-Cc-Ch
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RF-------TVEGCKGVFCVATPRTLED-PV-GL 68 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~-------~~~~~d~V~HlAa~~~~~~-~~-~~ 68 (91)
|+++.|+.++.+.+..... ... .++.++.+|+. .. .. .+.++|+|||.|+...... .. ++
T Consensus 28 v~~~~r~~~~~~~~~~~~~----~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~ 99 (255)
T TIGR01963 28 VVVNDLGEAGAEAAAKVAT----DAG----GSVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPP 99 (255)
T ss_pred EEEEeCCHHHHHHHHHHHH----hcC----CceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCH
Confidence 4567777665555555432 111 47888999999 43 22 2346899999999765421 11 21
Q ss_pred --HHHHHHHHHHHHHHHHHHHH
Q 042773 69 --EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 69 --~~~~~~~nv~gt~nlLeaa~ 88 (91)
.+.+++.|+.|+..+++++.
T Consensus 100 ~~~~~~~~~n~~g~~~~~~~~~ 121 (255)
T TIGR01963 100 EDWDRIIAIMLTSAFHTIRAAL 121 (255)
T ss_pred HHHHHHHHHHhHHHHHHHHHHH
Confidence 13567889999999888873
No 78
>PRK08219 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0004 Score=44.95 Aligned_cols=74 Identities=11% Similarity=-0.075 Sum_probs=45.0
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC---CCCEEEEcccCCCCCCC--cCh--HH
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE---GCKGVFCVATPRTLEDP--VGL--EK 70 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~---~~d~V~HlAa~~~~~~~--~~~--~~ 70 (91)
|.++.|+.++.+.+.+.. +.++++++|+. .. .++++ ++|+|||+|+....... .++ ..
T Consensus 29 V~~~~r~~~~~~~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~ 96 (227)
T PRK08219 29 LLLGGRPAERLDELAAEL------------PGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWR 96 (227)
T ss_pred EEEEeCCHHHHHHHHHHh------------ccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHH
Confidence 345667765544443321 36788999999 55 55554 58999999998643211 122 13
Q ss_pred HHHHHHHHHHHHHHHH
Q 042773 71 ELALPAVQGTLNVLEA 86 (91)
Q Consensus 71 ~~~~~nv~gt~nlLea 86 (91)
..++.|+.+..++.+.
T Consensus 97 ~~~~~n~~~~~~~~~~ 112 (227)
T PRK08219 97 ATLEVNVVAPAELTRL 112 (227)
T ss_pred HHHHHHhHHHHHHHHH
Confidence 4678888884444443
No 79
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.48 E-value=0.0003 Score=45.83 Aligned_cols=79 Identities=13% Similarity=-0.058 Sum_probs=52.1
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC-----C
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED-----P 65 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~-----~ 65 (91)
|.++.|++++...+...+.. .. .++.++.+|+. +. ..+++ .+|+|||+|+...... .
T Consensus 32 v~~~~r~~~~~~~~~~~~~~----~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~ 103 (246)
T PRK05653 32 VVIYDSNEEAAEALAAELRA----AG----GEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSE 103 (246)
T ss_pred EEEEeCChhHHHHHHHHHHh----cC----CceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCH
Confidence 34677887765554444321 11 47889999999 54 33333 4699999998764321 1
Q ss_pred cChHHHHHHHHHHHHHHHHHHHH
Q 042773 66 VGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 66 ~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++ ...++.|+.++.++++++.
T Consensus 104 ~~~-~~~~~~n~~~~~~l~~~~~ 125 (246)
T PRK05653 104 EDW-DRVIDVNLTGTFNVVRAAL 125 (246)
T ss_pred HHH-HHHHHHhhHHHHHHHHHHH
Confidence 122 3568899999999998885
No 80
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.00028 Score=46.10 Aligned_cols=80 Identities=8% Similarity=-0.040 Sum_probs=52.0
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC----c
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP----V 66 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~----~ 66 (91)
|.+++|++++...+...+. . . .++.++++|+. .. ...+ .++|+|||.|+....... .
T Consensus 33 V~~~~r~~~~~~~~~~~l~----~-~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~ 103 (237)
T PRK07326 33 VAITARDQKELEEAAAELN----N-K----GNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTP 103 (237)
T ss_pred EEEeeCCHHHHHHHHHHHh----c-c----CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCH
Confidence 4567787765544444321 1 0 37888999998 54 3333 368999999987643211 1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHH
Q 042773 67 GLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 67 ~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
+...+.++.|+.|+.++++++..
T Consensus 104 ~~~~~~~~~n~~~~~~~~~~~~~ 126 (237)
T PRK07326 104 EEWRLVIDTNLTGAFYTIKAAVP 126 (237)
T ss_pred HHHHHHHhhccHHHHHHHHHHHH
Confidence 11236789999999999998863
No 81
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.00033 Score=47.34 Aligned_cols=76 Identities=11% Similarity=-0.028 Sum_probs=51.1
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc------CCCCEEEEcccCCCCCCCcChHHHHH
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV------EGCKGVFCVATPRTLEDPVGLEKELA 73 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~------~~~d~V~HlAa~~~~~~~~~~~~~~~ 73 (91)
.+.|+.++.+.+.+... ... .++.++.+|++ .. ..++ ..+|++||.|+.... ..++ ..++
T Consensus 29 ~~~r~~~~~~~~~~~l~----~~~----~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li~nAG~~~~--~~~~-~~~~ 97 (275)
T PRK06940 29 LADYNEENLEAAAKTLR----EAG----FDVSTQEVDVSSRESVKALAATAQTLGPVTGLVHTAGVSPS--QASP-EAIL 97 (275)
T ss_pred EEeCCHHHHHHHHHHHH----hcC----CeEEEEEeecCCHHHHHHHHHHHHhcCCCCEEEECCCcCCc--hhhH-HHHH
Confidence 45677655444443321 111 36788999999 54 3333 358999999997532 2455 5889
Q ss_pred HHHHHHHHHHHHHHHH
Q 042773 74 LPAVQGTLNVLEAAKR 89 (91)
Q Consensus 74 ~~nv~gt~nlLeaa~~ 89 (91)
+.|+.|+.++++++..
T Consensus 98 ~vN~~g~~~l~~~~~~ 113 (275)
T PRK06940 98 KVDLYGTALVLEEFGK 113 (275)
T ss_pred HHhhHHHHHHHHHHHH
Confidence 9999999999998764
No 82
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.41 E-value=0.00029 Score=46.23 Aligned_cols=79 Identities=8% Similarity=-0.070 Sum_probs=52.1
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC------
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED------ 64 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~------ 64 (91)
|.++.|+.++...+..... . . .++.++.+|+. +. ..++ ..+|+|||.|+......
T Consensus 32 V~~~~r~~~~~~~~~~~~~----~-~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~ 102 (251)
T PRK07231 32 VVVTDRNEEAAERVAAEIL----A-G----GRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVD 102 (251)
T ss_pred EEEEeCCHHHHHHHHHHHh----c-C----CeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCC
Confidence 4567888776655544331 1 1 46889999999 55 4443 25799999998753211
Q ss_pred CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 65 PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 65 ~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
..++ ++.++.|+.|+.++++.+..
T Consensus 103 ~~~~-~~~~~~n~~~~~~l~~~~~~ 126 (251)
T PRK07231 103 EAEF-DRIFAVNVKSPYLWTQAAVP 126 (251)
T ss_pred HHHH-HHHHhhhhHHHHHHHHHHHH
Confidence 1222 46789999998888887753
No 83
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.00033 Score=46.08 Aligned_cols=79 Identities=9% Similarity=-0.109 Sum_probs=49.4
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCC---CC----
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTL---ED---- 64 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~---~~---- 64 (91)
..+.|++++...+...... .. .++.++.+|++ .. ..++ ..+|+|||.|+.... ..
T Consensus 34 i~~~r~~~~~~~~~~~~~~----~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~ 105 (250)
T PRK07774 34 VVADINAEGAERVAKQIVA----DG----GTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITV 105 (250)
T ss_pred EEEeCCHHHHHHHHHHHHh----cC----CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhC
Confidence 3456665544444443211 11 36778999999 54 3322 358999999997531 01
Q ss_pred -CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 65 -PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 65 -~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
..++ +++++.|+.++.++++++..
T Consensus 106 ~~~~~-~~~~~~n~~~~~~l~~~~~~ 130 (250)
T PRK07774 106 PWDYY-KKFMSVNLDGALVCTRAVYK 130 (250)
T ss_pred CHHHH-HHHHhhhhHHHHHHHHHHHH
Confidence 1222 35788999999999998874
No 84
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=97.40 E-value=0.00032 Score=51.41 Aligned_cols=59 Identities=17% Similarity=0.059 Sum_probs=46.1
Q ss_pred CCCCeEEEecCcc-cc--------ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 29 ECSRLAYWTPTLF-NG--------RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 29 ~~~~~~~v~~Dl~-~~--------~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
...++.-+.||+. ++ +...+.+++|||.||.... .++....+..|+.||+++++.|++.
T Consensus 77 ~l~Kv~pi~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrF---de~l~~al~iNt~Gt~~~l~lak~~ 144 (467)
T KOG1221|consen 77 ALEKVVPIAGDISEPDLGISESDLRTLADEVNIVIHSAATVRF---DEPLDVALGINTRGTRNVLQLAKEM 144 (467)
T ss_pred ceecceeccccccCcccCCChHHHHHHHhcCCEEEEeeeeecc---chhhhhhhhhhhHhHHHHHHHHHHh
Confidence 3468888999998 65 2234578999999999865 4555566888999999999999874
No 85
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.00041 Score=45.82 Aligned_cols=59 Identities=10% Similarity=-0.040 Sum_probs=41.6
Q ss_pred CCeEEEecCcc-cc--ccccC-------------CCCEEEEcccCCCCCCCcC-h---HHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE-------------GCKGVFCVATPRTLEDPVG-L---EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~-------------~~d~V~HlAa~~~~~~~~~-~---~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.+++++.+|++ .. ..+++ ++|+|||.|+........+ + ....++.|+.|+.++++++.+
T Consensus 56 ~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 134 (254)
T PRK12746 56 GKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLP 134 (254)
T ss_pred CcEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 36888999999 54 33333 5899999999764322111 1 135677999999999998864
No 86
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.00054 Score=45.35 Aligned_cols=76 Identities=11% Similarity=0.037 Sum_probs=49.7
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCC-C-----C
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLE-D-----P 65 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~-~-----~ 65 (91)
..+.|+.+..+.+...+ +. .++.++.+|+. +. ..++ .++|+|||.|+..... . .
T Consensus 39 ~~~~r~~~~~~~~~~~~----~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~ 108 (264)
T PRK12829 39 HVCDVSEAALAATAARL----PG------AKVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITP 108 (264)
T ss_pred EEEeCCHHHHHHHHHHH----hc------CceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCH
Confidence 45667765544444332 11 25688999999 54 3333 3689999999976221 1 1
Q ss_pred cChHHHHHHHHHHHHHHHHHHHH
Q 042773 66 VGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 66 ~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++ .++++.|+.++.++++++.
T Consensus 109 ~~~-~~~~~~n~~~~~~~~~~~~ 130 (264)
T PRK12829 109 EQW-EQTLAVNLNGQFYFARAAV 130 (264)
T ss_pred HHH-HHHHHHHhHHHHHHHHHHH
Confidence 233 4778999999999999874
No 87
>PLN02253 xanthoxin dehydrogenase
Probab=97.39 E-value=0.00046 Score=46.37 Aligned_cols=58 Identities=12% Similarity=0.081 Sum_probs=42.3
Q ss_pred CCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCC--C-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLE--D-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~--~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++++|++ .. ..+++ .+|+|||.|+..... . .+++ ..+++.|+.|+.++++++..
T Consensus 66 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~ 140 (280)
T PLN02253 66 PNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEF-EKVFDVNVKGVFLGMKHAAR 140 (280)
T ss_pred CceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHH-HHHHhHhhHHHHHHHHHHHH
Confidence 47889999999 54 44443 589999999875321 1 1233 46899999999999998763
No 88
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.38 E-value=0.00035 Score=46.39 Aligned_cols=79 Identities=5% Similarity=-0.134 Sum_probs=49.6
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-CcCh---
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-PVGL--- 68 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-~~~~--- 68 (91)
.+.|+.++...+...+.. .. .++.++.+|++ +. ..++ ..+|+|||+|+...... ...+
T Consensus 41 ~~~r~~~~~~~~~~~i~~----~~----~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~ 112 (259)
T PRK08213 41 LSARKAEELEEAAAHLEA----LG----IDALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEA 112 (259)
T ss_pred EEeCCHHHHHHHHHHHHh----cC----CeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHH
Confidence 455665554444433321 11 46788999999 54 3333 35799999998753211 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 042773 69 EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 69 ~~~~~~~nv~gt~nlLeaa~~ 89 (91)
..+.++.|+.++.++++++..
T Consensus 113 ~~~~~~~n~~~~~~l~~~~~~ 133 (259)
T PRK08213 113 WDKVMNLNVRGLFLLSQAVAK 133 (259)
T ss_pred HHHHHhHHhHHHHHHHHHHHH
Confidence 246788999999999998764
No 89
>PRK06182 short chain dehydrogenase; Validated
Probab=97.38 E-value=0.00038 Score=46.70 Aligned_cols=55 Identities=5% Similarity=-0.073 Sum_probs=37.2
Q ss_pred CeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAA 87 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa 87 (91)
+++++.+|++ .. ..+++ ++|+|||.|+...... ..++ +..++.|+.|+..+++++
T Consensus 47 ~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~ 116 (273)
T PRK06182 47 GVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEA-RRQFEVNLFGAARLTQLV 116 (273)
T ss_pred CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHH-HHHHhHHhHHHHHHHHHH
Confidence 5778999999 54 44443 6899999999865421 1233 467889999865555433
No 90
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.00015 Score=47.70 Aligned_cols=57 Identities=12% Similarity=-0.039 Sum_probs=42.2
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ .+ ..++ .++|+|||.|+.... ...++ ...+++|+.|+.++++++.+
T Consensus 56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~-~~~~~-~~~~~vn~~~~~~l~~~~~~ 122 (248)
T PRK07806 56 GRASAVGADLTDEESVAALMDTAREEFGGLDALVLNASGGME-SGMDE-DYAMRLNRDAQRNLARAALP 122 (248)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCC-CCCCc-ceeeEeeeHHHHHHHHHHHh
Confidence 46788999999 55 3333 258999999986532 22344 36788999999999999975
No 91
>PRK08643 acetoin reductase; Validated
Probab=97.36 E-value=0.00067 Score=44.90 Aligned_cols=80 Identities=9% Similarity=-0.105 Sum_probs=49.7
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC--cCh-
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP--VGL- 68 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~--~~~- 68 (91)
..+.|+.++...+...+.. .. .++.++++|++ +. ..++ .++|+|||.|+....... .++
T Consensus 30 ~~~~r~~~~~~~~~~~~~~----~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~ 101 (256)
T PRK08643 30 AIVDYNEETAQAAADKLSK----DG----GKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEE 101 (256)
T ss_pred EEEeCCHHHHHHHHHHHHh----cC----CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHH
Confidence 3456776555444443321 11 46788999999 54 3333 358999999987543211 111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHH
Q 042773 69 -EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 69 -~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.+..+++|+.|+..+++++..
T Consensus 102 ~~~~~~~~n~~~~~~~~~~~~~ 123 (256)
T PRK08643 102 QFDKVYNINVGGVIWGIQAAQE 123 (256)
T ss_pred HHHHHHHHhhHHHHHHHHHHHH
Confidence 246788999999988887753
No 92
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.00053 Score=46.85 Aligned_cols=58 Identities=12% Similarity=-0.083 Sum_probs=39.0
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC---CcChHHHHHHHHHHH----HHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED---PVGLEKELALPAVQG----TLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~---~~~~~~~~~~~nv~g----t~nlLeaa~~ 89 (91)
.++.++.+|+. .. ..++ ..+|+|||.|+....+. ..+. +..+++|+.| +..+++.+++
T Consensus 67 ~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~ll~~l~~ 141 (306)
T PRK06197 67 ADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGF-ELQFGTNHLGHFALTGLLLDRLLP 141 (306)
T ss_pred CceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCc-chhhhhhhHHHHHHHHHHHHHHhh
Confidence 46889999999 54 3332 35899999999764321 2233 4678999999 5556665544
No 93
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.32 E-value=0.00041 Score=45.96 Aligned_cols=80 Identities=8% Similarity=-0.171 Sum_probs=50.4
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC-CcCh--
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED-PVGL-- 68 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~-~~~~-- 68 (91)
..+.|++++...+...+.. .. .++.++.+|+. .. ..+++ .+|+|||.|+...... ...+
T Consensus 38 ~~~~r~~~~~~~~~~~i~~----~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~ 109 (255)
T PRK07523 38 ILNGRDPAKLAAAAESLKG----QG----LSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPAD 109 (255)
T ss_pred EEEeCCHHHHHHHHHHHHh----cC----ceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHH
Confidence 3455666554444433321 11 35788999999 54 44432 4799999999864321 1111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHH
Q 042773 69 -EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 69 -~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.+..++.|+.|+.++++++.+
T Consensus 110 ~~~~~~~~n~~~~~~l~~~~~~ 131 (255)
T PRK07523 110 AFERLLRTNISSVFYVGQAVAR 131 (255)
T ss_pred HHHHHHHHHhHHHHHHHHHHHH
Confidence 135678999999999998864
No 94
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.32 E-value=0.00081 Score=44.15 Aligned_cols=78 Identities=8% Similarity=-0.057 Sum_probs=50.1
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-C-cCh--
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-P-VGL-- 68 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-~-~~~-- 68 (91)
.+.|+.++.+.+...... .. .++.++.+|+. .. ...+ .++|+|||.|+...... . .++
T Consensus 32 ~~~r~~~~~~~~~~~~~~----~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~ 103 (250)
T TIGR03206 32 VFDLNREAAEKVAADIRA----KG----GNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPL 103 (250)
T ss_pred EecCCHHHHHHHHHHHHh----cC----CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHH
Confidence 455776655555443321 11 47889999998 54 3333 25899999998754321 1 111
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 042773 69 EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 69 ~~~~~~~nv~gt~nlLeaa~ 88 (91)
.+..++.|+.++.++++++.
T Consensus 104 ~~~~~~~n~~~~~~l~~~~~ 123 (250)
T TIGR03206 104 WERLIAINLTGALHMHHAVL 123 (250)
T ss_pred HHHHHHHHhHHHHHHHHHHH
Confidence 13568999999999988875
No 95
>PRK12827 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.00091 Score=43.76 Aligned_cols=57 Identities=14% Similarity=-0.044 Sum_probs=42.0
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|+. .. ...+ .++|+|||.|+...... ..++ ...++.|+.|+.++++++.
T Consensus 59 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~ 130 (249)
T PRK12827 59 GKALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEW-DDVIDVNLDGFFNVTQAAL 130 (249)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHH-HHHHHHhhhHHHHHHHHHH
Confidence 47889999999 54 3333 35899999999865321 1222 3678899999999999987
No 96
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.00067 Score=44.83 Aligned_cols=79 Identities=9% Similarity=-0.070 Sum_probs=52.4
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----C
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----P 65 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~ 65 (91)
|.++.|++++.+.+...+.. .. .++.++.+|+. .. ...+ ..+|+|||.|+...... .
T Consensus 36 Vi~~~r~~~~~~~~~~~l~~----~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~ 107 (258)
T PRK06949 36 VVLASRRVERLKELRAEIEA----EG----GAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTP 107 (258)
T ss_pred EEEEeCCHHHHHHHHHHHHh----cC----CcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCH
Confidence 45677887766555554321 11 46888999998 54 3333 25899999999754321 1
Q ss_pred cChHHHHHHHHHHHHHHHHHHHH
Q 042773 66 VGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 66 ~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++ ..+++.|+.|+.++++++.
T Consensus 108 ~~~-~~~~~~n~~~~~~~~~~~~ 129 (258)
T PRK06949 108 ADF-DFVFDTNTRGAFFVAQEVA 129 (258)
T ss_pred HHH-HHHHhhcchhhHHHHHHHH
Confidence 233 4678899999999998875
No 97
>PRK06194 hypothetical protein; Provisional
Probab=97.25 E-value=0.00091 Score=45.04 Aligned_cols=56 Identities=7% Similarity=-0.117 Sum_probs=39.7
Q ss_pred CCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC-C----cChHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED-P----VGLEKELALPAVQGTLNVLEAA 87 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~-~----~~~~~~~~~~nv~gt~nlLeaa 87 (91)
.++.++.+|++ .. ..+++ .+|+|||+|+...... . .++ ..+++.|+.|+.++.+++
T Consensus 55 ~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~ 125 (287)
T PRK06194 55 AEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADW-EWVLGVNLWGVIHGVRAF 125 (287)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHH-HHHHhhccHHHHHHHHHH
Confidence 46888999999 54 44443 4799999999875421 1 222 356889999999966654
No 98
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.00071 Score=45.39 Aligned_cols=81 Identities=10% Similarity=-0.028 Sum_probs=51.9
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cc---c---cCCCCEEEEcccCCCCCCC-----c
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RF---T---VEGCKGVFCVATPRTLEDP-----V 66 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~---~---~~~~d~V~HlAa~~~~~~~-----~ 66 (91)
|.++.|+.++...+....... +.. .+++++.+|++ +. .. . +..+|+|||+|+....... .
T Consensus 30 V~~~~r~~~~~~~~~~~~~~~--~~~----~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~ 103 (280)
T PRK06914 30 VIATMRNPEKQENLLSQATQL--NLQ----QNIKVQQLDVTDQNSIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVE 103 (280)
T ss_pred EEEEeCCHHHHHHHHHHHHhc--CCC----CceeEEecCCCCHHHHHHHHHHHHhcCCeeEEEECCcccccCccccCCHH
Confidence 346678877665554432211 111 47889999999 55 32 1 1357999999987653211 2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHH
Q 042773 67 GLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 67 ~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
++ .+.+++|+.|+.++++++.
T Consensus 104 ~~-~~~~~~n~~~~~~l~~~~~ 124 (280)
T PRK06914 104 EY-RKQFETNVFGAISVTQAVL 124 (280)
T ss_pred HH-HHHHHHhhHHHHHHHHHHH
Confidence 22 3568899999999998863
No 99
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0011 Score=43.42 Aligned_cols=58 Identities=10% Similarity=-0.024 Sum_probs=41.2
Q ss_pred CCeEEEecCcc-cc--ccc-------cCCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFT-------VEGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~-------~~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++++|+. .. ... +..+|+|||.|+...... .+++ ..+++.|+.|+.++++++..
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 124 (249)
T PRK06500 52 ESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMF-DRSFNTNVKGPYFLIQALLP 124 (249)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHH
Confidence 36778899998 43 222 236899999998754321 1233 46899999999999999863
No 100
>PRK05717 oxidoreductase; Validated
Probab=97.21 E-value=0.00059 Score=45.27 Aligned_cols=58 Identities=7% Similarity=0.043 Sum_probs=41.4
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCC--C-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLE--D-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~--~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ .. ..++ ..+|+|||+|+..... . .+++ .++++.|+.|+.++++++..
T Consensus 56 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 130 (255)
T PRK05717 56 ENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHW-NRVLAVNLTGPMLLAKHCAP 130 (255)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHHHH
Confidence 36788999999 54 3322 2479999999976421 1 1233 36889999999999999863
No 101
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.00063 Score=44.65 Aligned_cols=79 Identities=8% Similarity=-0.123 Sum_probs=51.3
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC-----C
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED-----P 65 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~-----~ 65 (91)
|.++.|++++...+..... ... .++.++.+|++ .. ..+++ .+|+|||.|+...... .
T Consensus 33 V~~~~r~~~~~~~~~~~~~----~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~ 104 (241)
T PRK07454 33 LALVARSQDALEALAAELR----STG----VKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPL 104 (241)
T ss_pred EEEEeCCHHHHHHHHHHHH----hCC----CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCH
Confidence 4567787766555544332 111 47888999999 54 33332 5899999998754321 1
Q ss_pred cChHHHHHHHHHHHHHHHHHHHH
Q 042773 66 VGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 66 ~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.+. ..+++.|+.++.++++.+.
T Consensus 105 ~~~-~~~~~~n~~~~~~~~~~~~ 126 (241)
T PRK07454 105 SDW-QWVIQLNLTSVFQCCSAVL 126 (241)
T ss_pred HHH-HHHHHhccHHHHHHHHHHH
Confidence 222 4678899999999887764
No 102
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.18 E-value=0.001 Score=43.84 Aligned_cols=79 Identities=9% Similarity=-0.081 Sum_probs=48.0
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC-CcCh--
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED-PVGL-- 68 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~-~~~~-- 68 (91)
..+.|+.++.+.+..... ... .++.++.+|+. .. ..+++ ++|+|||.|+...... ...+
T Consensus 32 ~~~~r~~~~~~~~~~~~~----~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~ 103 (258)
T PRK12429 32 VIADLNDEAAAAAAEALQ----KAG----GKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTE 103 (258)
T ss_pred EEEeCCHHHHHHHHHHHH----hcC----CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHH
Confidence 456777666544433321 111 57889999999 54 44433 6899999998764421 1222
Q ss_pred -HHHHHHHHHHHHHHHHHHHH
Q 042773 69 -EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 69 -~~~~~~~nv~gt~nlLeaa~ 88 (91)
....++.|+.|+.++++.+.
T Consensus 104 ~~~~~~~~n~~~~~~l~~~~~ 124 (258)
T PRK12429 104 KWKKMIAIMLDGAFLTTKAAL 124 (258)
T ss_pred HHHHHHhhcchhhHHHHHHHH
Confidence 13567789999666655543
No 103
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.001 Score=44.73 Aligned_cols=74 Identities=15% Similarity=-0.099 Sum_probs=48.3
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-----c
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-----V 66 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-----~ 66 (91)
..+.|+.++...+.... . ..+.++++|++ .. ...+ .++|+|||+|+....... .
T Consensus 31 ~~~~r~~~~~~~~~~~~-------~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~ 99 (275)
T PRK08263 31 VATARDTATLADLAEKY-------G----DRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTES 99 (275)
T ss_pred EEEECCHHHHHHHHHhc-------c----CCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHH
Confidence 45667665544443321 1 36778899998 44 3332 357999999998654221 2
Q ss_pred ChHHHHHHHHHHHHHHHHHHH
Q 042773 67 GLEKELALPAVQGTLNVLEAA 87 (91)
Q Consensus 67 ~~~~~~~~~nv~gt~nlLeaa 87 (91)
++ +.++++|+.++.++++++
T Consensus 100 ~~-~~~~~~n~~~~~~l~~~~ 119 (275)
T PRK08263 100 EA-RAQIDTNFFGALWVTQAV 119 (275)
T ss_pred HH-HHHHHHhhHHHHHHHHHH
Confidence 33 467899999999888876
No 104
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0012 Score=44.50 Aligned_cols=59 Identities=10% Similarity=-0.061 Sum_probs=37.9
Q ss_pred CeEEEecCcc-cc--cccc--------CCCCEEEEcccCCCCCCC-cCh---HHHHHHHHHHH----HHHHHHHHHHc
Q 042773 32 RLAYWTPTLF-NG--RFTV--------EGCKGVFCVATPRTLEDP-VGL---EKELALPAVQG----TLNVLEAAKRL 90 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~--------~~~d~V~HlAa~~~~~~~-~~~---~~~~~~~nv~g----t~nlLeaa~~~ 90 (91)
+++++.+|++ .. ..++ ..+|+|||.|+....... ..+ ....++.|+.| +..+++.+++.
T Consensus 48 ~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~ 125 (277)
T PRK05993 48 GLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ 125 (277)
T ss_pred CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc
Confidence 5678899999 54 3332 247999999987654321 111 13578899999 55666666543
No 105
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0006 Score=45.05 Aligned_cols=58 Identities=14% Similarity=0.000 Sum_probs=41.7
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCC-CC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTL-ED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~-~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ .. ..++ ..+|+|||.|+.... .. ..++ ...++.|+.|+..+++++..
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 127 (258)
T PRK07890 54 RRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHW-RAVIELNVLGTLRLTQAFTP 127 (258)
T ss_pred CceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHH-HHHHHhhhHHHHHHHHHHHH
Confidence 46889999998 54 3332 357999999987532 11 1233 46789999999999999864
No 106
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.14 E-value=0.0015 Score=42.69 Aligned_cols=59 Identities=8% Similarity=-0.148 Sum_probs=41.3
Q ss_pred CCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCCC----cChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLEDP----VGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~~----~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ +. ..+++ ++|+|||.|+....... .+..+..++.|+.|+.++++++..
T Consensus 55 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 127 (247)
T PRK05565 55 GDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALP 127 (247)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999 54 33333 68999999998743211 111246788999999999887753
No 107
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0017 Score=42.97 Aligned_cols=77 Identities=9% Similarity=-0.058 Sum_probs=49.9
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcC
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVG 67 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~ 67 (91)
.+.|+.++.+.+...+... . .++.++.+|++ +. ..++ .++|+|||.|+...... .++
T Consensus 30 ~~~r~~~~~~~~~~~~~~~----~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~ 101 (252)
T PRK07677 30 ITGRTKEKLEEAKLEIEQF----P----GQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNG 101 (252)
T ss_pred EEeCCHHHHHHHHHHHHhc----C----CcEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHH
Confidence 4457766555554433211 1 47889999998 54 3322 35799999998643211 122
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 042773 68 LEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 68 ~~~~~~~~nv~gt~nlLeaa~ 88 (91)
+ ..+++.|+.|+.++++++.
T Consensus 102 ~-~~~~~~n~~~~~~l~~~~~ 121 (252)
T PRK07677 102 W-NSVIDIVLNGTFYCSQAVG 121 (252)
T ss_pred H-HHHHhHhhHHHHHHHHHHH
Confidence 2 4689999999999999885
No 108
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.00099 Score=43.63 Aligned_cols=58 Identities=14% Similarity=0.064 Sum_probs=40.2
Q ss_pred CeEEEecCcc-cc--ccccC---CCCEEEEcccCCCCCCC----cChHHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTVE---GCKGVFCVATPRTLEDP----VGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~~---~~d~V~HlAa~~~~~~~----~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
+..++.+|+. .. ..+++ .+|+|||.|+....... .+...+.+..|+.++.++++++.+
T Consensus 54 ~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 121 (245)
T PRK07060 54 GCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVAR 121 (245)
T ss_pred CCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4567889998 44 44443 48999999998643211 111235678999999999998864
No 109
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=97.10 E-value=0.00099 Score=43.80 Aligned_cols=58 Identities=9% Similarity=-0.125 Sum_probs=42.5
Q ss_pred CCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCCC-----cChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLEDP-----VGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~~-----~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|+. .. ..+++ .+|+|||.|+....... .++ ++.++.|+.++.++++++..
T Consensus 56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 128 (247)
T PRK12935 56 HDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDW-ERVIDVNLSSVFNTTSAVLP 128 (247)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHH
Confidence 36888999999 54 44443 37999999998643211 233 47789999999999999863
No 110
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.06 E-value=0.0019 Score=42.45 Aligned_cols=59 Identities=7% Similarity=-0.182 Sum_probs=40.9
Q ss_pred CCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCCC-cCh---HHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLEDP-VGL---EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~~-~~~---~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|+. +. ..+++ .+|+|||.|+....... ..+ ....++.|+.++.++++++..
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 126 (250)
T PRK08063 54 RKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAK 126 (250)
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46888999999 54 33333 58999999987543221 111 124678999999999998864
No 111
>PRK06196 oxidoreductase; Provisional
Probab=97.06 E-value=0.0021 Score=44.16 Aligned_cols=56 Identities=9% Similarity=-0.087 Sum_probs=38.0
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC---CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED---PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~---~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
++.++.+|++ .. ..++ .++|+|||.|+....+. ..+. +..+++|+.|+..+++.+.
T Consensus 72 ~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~ll 140 (315)
T PRK06196 72 GVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGW-EAQFATNHLGHFALVNLLW 140 (315)
T ss_pred hCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccH-HHHHHHhhHHHHHHHHHHH
Confidence 4778999999 44 3332 35899999999754321 1233 4678999999777666543
No 112
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0013 Score=43.55 Aligned_cols=77 Identities=14% Similarity=-0.005 Sum_probs=50.3
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-----cC
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-----VG 67 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-----~~ 67 (91)
.+.|+.++.+.+...+.. .. .++.++.+|+. +. ..++ ..+|++||.|+....... .+
T Consensus 38 ~~~r~~~~~~~~~~~l~~----~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~ 109 (253)
T PRK05867 38 IAARHLDALEKLADEIGT----SG----GKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEE 109 (253)
T ss_pred EEcCCHHHHHHHHHHHHh----cC----CeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHH
Confidence 456776655555444321 11 46778899999 54 3333 368999999997643211 12
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 042773 68 LEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 68 ~~~~~~~~nv~gt~nlLeaa~ 88 (91)
. +++++.|+.|+..+++++.
T Consensus 110 ~-~~~~~~n~~~~~~~~~~~~ 129 (253)
T PRK05867 110 F-QRLQNTNVTGVFLTAQAAA 129 (253)
T ss_pred H-HHHHHhcchhHHHHHHHHH
Confidence 2 3567899999999998875
No 113
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0028 Score=41.62 Aligned_cols=58 Identities=10% Similarity=-0.189 Sum_probs=39.8
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-C-cCh--HHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-P-VGL--EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-~-~~~--~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++++|+. +. .+++ .++|+|||.|+...... . .++ ....++.|+.++.++.+++.
T Consensus 53 ~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 124 (252)
T PRK06138 53 GRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAI 124 (252)
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHH
Confidence 46888999999 54 4433 36899999999764321 1 121 13568899999988777654
No 114
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0025 Score=42.17 Aligned_cols=78 Identities=10% Similarity=-0.141 Sum_probs=49.1
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCCCc---Ch
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLEDPV---GL 68 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~~~---~~ 68 (91)
..+.|++++...+..+ .. .. .++.++.+|++ .. ...++ ++|+|||.|+........ +.
T Consensus 35 ~~~~r~~~~~~~~~~~-~~----~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~ 105 (258)
T PRK08628 35 VIFGRSAPDDEFAEEL-RA----LQ----PRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREA 105 (258)
T ss_pred EEEcCChhhHHHHHHH-Hh----cC----CceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHH
Confidence 4566776655323332 11 11 47889999999 54 43332 589999999964321111 11
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 042773 69 EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 69 ~~~~~~~nv~gt~nlLeaa~ 88 (91)
....++.|+.++.++++++.
T Consensus 106 ~~~~~~~n~~~~~~~~~~~~ 125 (258)
T PRK08628 106 FVASLERNLIHYYVMAHYCL 125 (258)
T ss_pred HHHHHhhhhHHHHHHHHHHH
Confidence 24678899999999988875
No 115
>PRK07775 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0016 Score=43.79 Aligned_cols=58 Identities=7% Similarity=-0.079 Sum_probs=40.5
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-Cc-Ch--HHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-PV-GL--EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-~~-~~--~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|++ .. ..++ .++|+|||.|+...... .. ++ ....++.|+.|+.++++++.
T Consensus 59 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l 130 (274)
T PRK07775 59 GEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVL 130 (274)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 36788899999 54 3333 35799999999764321 11 11 13567899999999998875
No 116
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.05 E-value=0.0015 Score=43.23 Aligned_cols=57 Identities=7% Similarity=-0.111 Sum_probs=38.7
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCC--CC----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTL--ED----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~--~~----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|+. .. ..++ .++|+|||.|+.... +. .+++ .++++.|+.|+.++++++.
T Consensus 46 ~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~ 118 (248)
T PRK10538 46 DNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDW-ETMIDTNNKGLVYMTRAVL 118 (248)
T ss_pred cceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHH
Confidence 46888999998 44 3333 368999999986421 11 1222 4678999999777776654
No 117
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0027 Score=41.60 Aligned_cols=79 Identities=15% Similarity=0.021 Sum_probs=50.1
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-Cc---Ch
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-PV---GL 68 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-~~---~~ 68 (91)
++.|++++.+.+...+.. .. .++.++.+|+. .. ..++ .++|+|||.|+...... .. ..
T Consensus 36 ~~~r~~~~~~~~~~~~~~----~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~ 107 (250)
T PRK12939 36 FNDGLAAEARELAAALEA----AG----GRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDT 107 (250)
T ss_pred EEeCCHHHHHHHHHHHHh----cC----CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHH
Confidence 445666655544443321 11 47889999999 44 3333 36899999999764321 11 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 042773 69 EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 69 ~~~~~~~nv~gt~nlLeaa~~ 89 (91)
....++.|+.|+.++++++..
T Consensus 108 ~~~~~~~n~~~~~~l~~~~~~ 128 (250)
T PRK12939 108 WDAVMNVNVRGTFLMLRAALP 128 (250)
T ss_pred HHHHHHHhhHHHHHHHHHHHH
Confidence 235688999999999988753
No 118
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.03 E-value=0.0022 Score=42.47 Aligned_cols=58 Identities=16% Similarity=0.089 Sum_probs=41.6
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ .. ..++ ..+|++||.|+...... .+++ +..++.|+.++.++++++..
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 124 (257)
T PRK07067 52 PAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSY-DRLFAVNVKGLFFLMQAVAR 124 (257)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHH-HHHHHhhhhhHHHHHHHHHH
Confidence 36788999998 54 3333 35899999998764321 1233 46789999999999999863
No 119
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0016 Score=43.20 Aligned_cols=59 Identities=12% Similarity=-0.000 Sum_probs=41.8
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ .. ..++ ..+|+|||.|+...... ..+....+++.|+.|+.++++++..
T Consensus 59 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 131 (258)
T PRK09134 59 RRAVALQADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFAR 131 (258)
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46888999998 44 3333 34799999998754311 1112246789999999999998764
No 120
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0022 Score=42.83 Aligned_cols=57 Identities=12% Similarity=0.024 Sum_probs=41.5
Q ss_pred CCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCCC-----cChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLEDP-----VGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~~-----~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.+++++++|+. .. ..+++ .+|+|||.|+....... .+. ..++++|+.|+.++++++.
T Consensus 45 ~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~g~~~~~~~~~ 116 (270)
T PRK06179 45 PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQA-QALFDTNVFGILRMTRAVL 116 (270)
T ss_pred CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHH-HHHHHHHhHHHHHHHHHHH
Confidence 47789999999 54 44443 47999999998654221 223 4678999999999998863
No 121
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.97 E-value=0.00097 Score=43.84 Aligned_cols=67 Identities=18% Similarity=0.157 Sum_probs=43.8
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHH
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAV 77 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv 77 (91)
||+.+|+.++. ....+ + . .+++++++|+. .. .++|+|+|.||.+-+... +. -+
T Consensus 25 V~~l~R~~~~~-~~~~l-~----~------~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~------~~------~~ 80 (233)
T PF05368_consen 25 VRALVRDPSSD-RAQQL-Q----A------LGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH------PS------EL 80 (233)
T ss_dssp EEEEESSSHHH-HHHHH-H----H------TTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC------CC------HH
T ss_pred cEEEEeccchh-hhhhh-h----c------ccceEeecccCCHHHHHHHHcCCceEEeecCcch------hh------hh
Confidence 68899998432 22332 1 1 36678999998 55 889999999998755432 11 23
Q ss_pred HHHHHHHHHHHHcC
Q 042773 78 QGTLNVLEAAKRLG 91 (91)
Q Consensus 78 ~gt~nlLeaa~~~g 91 (91)
....++++||+++|
T Consensus 81 ~~~~~li~Aa~~ag 94 (233)
T PF05368_consen 81 EQQKNLIDAAKAAG 94 (233)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhhhhHHHhhhccc
Confidence 45677888888765
No 122
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0024 Score=42.50 Aligned_cols=78 Identities=13% Similarity=0.068 Sum_probs=50.6
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc------CCCCEEEEcccCCCCCC-----CcC
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV------EGCKGVFCVATPRTLED-----PVG 67 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~------~~~d~V~HlAa~~~~~~-----~~~ 67 (91)
.++.|+.++...+.... .. . .++.++.+|++ .. ..++ ..+|+|||.|+...... ..+
T Consensus 33 ~~~~r~~~~~~~~~~~~----~~-~----~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~ 103 (263)
T PRK09072 33 LLVGRNAEKLEALAARL----PY-P----GRHRWVVADLTSEAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEA 103 (263)
T ss_pred EEEECCHHHHHHHHHHH----hc-C----CceEEEEccCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHH
Confidence 45667765544444332 11 1 47889999999 54 3322 35799999999764321 122
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q 042773 68 LEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 68 ~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
. ..+++.|+.|+.++++++..
T Consensus 104 ~-~~~~~~n~~g~~~l~~~~~~ 124 (263)
T PRK09072 104 I-ERLLALNLTAPMQLTRALLP 124 (263)
T ss_pred H-HHHHhhhhHHHHHHHHHHHH
Confidence 2 46788999999999998753
No 123
>PRK08264 short chain dehydrogenase; Validated
Probab=96.95 E-value=0.0025 Score=41.69 Aligned_cols=57 Identities=14% Similarity=-0.059 Sum_probs=40.8
Q ss_pred CCeEEEecCcc-cc--ccccC---CCCEEEEcccCC-CCCC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE---GCKGVFCVATPR-TLED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~---~~d~V~HlAa~~-~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|+. .. ..+++ .+|+|||.|+.. .... ..++ ...++.|+.++.++++++.
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~ 117 (238)
T PRK08264 49 PRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDAL-RAEMETNYFGPLAMARAFA 117 (238)
T ss_pred CceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHH-HHHHHHHhHHHHHHHHHHH
Confidence 47889999999 55 44443 589999999983 2211 1222 3678899999999999875
No 124
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0025 Score=42.34 Aligned_cols=59 Identities=12% Similarity=-0.090 Sum_probs=40.9
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-CcCh---HHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-PVGL---EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-~~~~---~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|+. .. ..++ ..+|+|||.|+...... ...+ .++.++.|+.|+.++++++..
T Consensus 54 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 126 (263)
T PRK08226 54 HRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLP 126 (263)
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 36788999999 54 3333 35799999999754322 1111 135688999999999998753
No 125
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.94 E-value=0.0032 Score=41.81 Aligned_cols=57 Identities=7% Similarity=-0.030 Sum_probs=40.2
Q ss_pred CCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|+. .. ...++ .+|++||.|+...... ..+. +..++.|+.++.++++++.
T Consensus 63 ~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~ 134 (258)
T PRK06935 63 RKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDW-NAVMDINLNSVYHLSQAVA 134 (258)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHH-HHHHHHhCHHHHHHHHHHH
Confidence 47889999999 54 33333 5799999999754311 1232 3678899999988887765
No 126
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0021 Score=43.06 Aligned_cols=58 Identities=21% Similarity=0.166 Sum_probs=40.6
Q ss_pred CCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCC--C----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLE--D----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~--~----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|+. +. ...++ .+|+|||.|+..... . ..+. ...++.|+.++.++++++.+
T Consensus 58 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 131 (276)
T PRK05875 58 GAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAW-RRTVDLNVNGTMYVLKHAAR 131 (276)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHHHH
Confidence 47888999998 54 34433 689999999864321 1 1222 36788899999999988754
No 127
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0031 Score=41.73 Aligned_cols=78 Identities=9% Similarity=-0.052 Sum_probs=48.5
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCC-CC--C---
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTL-ED--P--- 65 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~-~~--~--- 65 (91)
..+.|++++.+.+...+... . .++.++.+|+. .+ ..++ ..+|++||.|+.... .. .
T Consensus 34 ~~~~r~~~~~~~~~~~~~~~----~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~ 105 (254)
T PRK07478 34 VVGARRQAELDQLVAEIRAE----G----GEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSL 105 (254)
T ss_pred EEEeCCHHHHHHHHHHHHhc----C----CcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCH
Confidence 34567766655554433211 1 46788999999 54 3333 268999999997532 11 1
Q ss_pred cChHHHHHHHHHHHHHHHHHHHH
Q 042773 66 VGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 66 ~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
++. ..++++|+.++..+.+++.
T Consensus 106 ~~~-~~~~~~N~~~~~~~~~~~~ 127 (254)
T PRK07478 106 EGW-RETLATNLTSAFLGAKHQI 127 (254)
T ss_pred HHH-HHHHHHHhHHHHHHHHHHH
Confidence 222 4678999988887766543
No 128
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0032 Score=43.06 Aligned_cols=79 Identities=8% Similarity=-0.151 Sum_probs=50.0
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCCCc----C
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLEDPV----G 67 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~~~----~ 67 (91)
.++.|+.++.+.+...+.. .. ..+.++.+|+. .. ..+++ ++|+|||.|+........ +
T Consensus 68 i~~~R~~~~l~~~~~~l~~----~~----~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~ 139 (293)
T PRK05866 68 VAVARREDLLDAVADRITR----AG----GDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDR 139 (293)
T ss_pred EEEECCHHHHHHHHHHHHh----cC----CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhcccc
Confidence 4567776655555443321 11 36778999999 54 44443 689999999876432111 1
Q ss_pred h--HHHHHHHHHHHHHHHHHHHH
Q 042773 68 L--EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 68 ~--~~~~~~~nv~gt~nlLeaa~ 88 (91)
+ ....++.|+.|+.++++++.
T Consensus 140 ~~~~~~~~~vN~~g~~~l~~~~~ 162 (293)
T PRK05866 140 WHDVERTMVLNYYAPLRLIRGLA 162 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 13578899999999888764
No 129
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0035 Score=41.18 Aligned_cols=80 Identities=14% Similarity=-0.092 Sum_probs=49.4
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccc-------cCCCCEEEEcccCCCCCCC----cCh
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFT-------VEGCKGVFCVATPRTLEDP----VGL 68 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~-------~~~~d~V~HlAa~~~~~~~----~~~ 68 (91)
.+.|+.++.+.+...... .+.. .++.++.+|++ .. ..+ +.++|+|||.|+....... .+.
T Consensus 31 ~~~r~~~~~~~~~~~~~~--~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~ 104 (248)
T PRK08251 31 LCARRTDRLEELKAELLA--RYPG----IKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWA 104 (248)
T ss_pred EEeCCHHHHHHHHHHHHh--hCCC----ceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHH
Confidence 455666555444433211 1111 47888999999 54 332 2368999999987643211 111
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 042773 69 EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 69 ~~~~~~~nv~gt~nlLeaa~ 88 (91)
....++.|+.|+.++++++.
T Consensus 105 ~~~~~~~n~~~~~~~~~~~~ 124 (248)
T PRK08251 105 NKATAETNFVAALAQCEAAM 124 (248)
T ss_pred HHHHHHHHhHHHHHHHHHHH
Confidence 23578899999999998874
No 130
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0026 Score=42.53 Aligned_cols=77 Identities=8% Similarity=-0.229 Sum_probs=47.2
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-cCh---
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-VGL--- 68 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-~~~--- 68 (91)
.+.|+.++.+.+..... ... .++.++.+|+. .. ..++ .++|+|||.|+....... ..+
T Consensus 29 ~~~r~~~~~~~~~~~l~----~~~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~ 100 (270)
T PRK05650 29 LADVNEEGGEETLKLLR----EAG----GDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLED 100 (270)
T ss_pred EEeCCHHHHHHHHHHHH----hcC----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHH
Confidence 45577665544443322 111 47888999998 44 3333 368999999997643211 111
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 042773 69 EKELALPAVQGTLNVLEAA 87 (91)
Q Consensus 69 ~~~~~~~nv~gt~nlLeaa 87 (91)
.+.+++.|+.++.++.+++
T Consensus 101 ~~~~~~~n~~~~~~~~~~~ 119 (270)
T PRK05650 101 WDWQIAINLMGVVKGCKAF 119 (270)
T ss_pred HHHHHHHccHHHHHHHHHH
Confidence 1346789988888877664
No 131
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.0021 Score=42.22 Aligned_cols=80 Identities=8% Similarity=-0.106 Sum_probs=50.8
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC----CCCEEEEcccCCCCCC-----CcChH
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE----GCKGVFCVATPRTLED-----PVGLE 69 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~----~~d~V~HlAa~~~~~~-----~~~~~ 69 (91)
.++.|++++...+....... + . .+++++++|+. .. ...++ .+|+|||.|+...... ..++
T Consensus 29 i~~~r~~~~~~~~~~~~~~~-~--~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~- 100 (243)
T PRK07102 29 YLAARDVERLERLADDLRAR-G--A----VAVSTHELDILDTASHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALA- 100 (243)
T ss_pred EEEeCCHHHHHHHHHHHHHh-c--C----CeEEEEecCCCChHHHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHH-
Confidence 45677766554433322111 1 1 47899999999 54 43333 4699999998754321 1222
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 042773 70 KELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 70 ~~~~~~nv~gt~nlLeaa~~ 89 (91)
.+.++.|+.|+.++++++..
T Consensus 101 ~~~~~~n~~~~~~l~~~~~~ 120 (243)
T PRK07102 101 LREFRTNFEGPIALLTLLAN 120 (243)
T ss_pred HHHHHhhhHHHHHHHHHHHH
Confidence 35788999999999988753
No 132
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.0026 Score=41.36 Aligned_cols=57 Identities=9% Similarity=-0.006 Sum_probs=40.1
Q ss_pred CeEEEecCcc-cc--ccc---cC--CCCEEEEcccCCCCC-------CCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFT---VE--GCKGVFCVATPRTLE-------DPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~---~~--~~d~V~HlAa~~~~~-------~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
+++++.+|+. .. ..+ +. .+|+|||.|+..... ..+++ ...++.|+.++.++++++..
T Consensus 45 ~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 116 (222)
T PRK06953 45 GAEALALDVADPASVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDF-DAVMHTNVLGPMQLLPILLP 116 (222)
T ss_pred cceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHH-HHHHhhhhhhHHHHHHHHHH
Confidence 4568899999 54 332 23 489999999886321 11233 46899999999999998864
No 133
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0027 Score=42.60 Aligned_cols=56 Identities=9% Similarity=-0.070 Sum_probs=39.5
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-----cChHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-----VGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-----~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
++.++.+|+. .. ..++ .++|+|||.|+....... .+. ...++.|+.|+.++++++.
T Consensus 45 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~ 115 (274)
T PRK05693 45 GFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAM-RRQFETNVFAVVGVTRALF 115 (274)
T ss_pred CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHH
Confidence 4668889998 44 3333 368999999997543211 222 3678899999999998874
No 134
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0037 Score=41.47 Aligned_cols=79 Identities=10% Similarity=-0.065 Sum_probs=49.7
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcC
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVG 67 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~ 67 (91)
.+.|++++.+.+...+... +.. .++.++.+|++ .. ..++ ..+|++||.|+...... ..+
T Consensus 36 ~~~r~~~~~~~~~~~~~~~--~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~ 109 (260)
T PRK07063 36 LADLDAALAERAAAAIARD--VAG----ARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDED 109 (260)
T ss_pred EEeCCHHHHHHHHHHHHhc--cCC----ceEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHH
Confidence 4557665554444433210 011 46888999999 54 3333 36899999999753321 123
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 042773 68 LEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 68 ~~~~~~~~nv~gt~nlLeaa~ 88 (91)
. ...++.|+.++.++++++.
T Consensus 110 ~-~~~~~~n~~~~~~~~~~~~ 129 (260)
T PRK07063 110 W-RRCFAVDLDGAWNGCRAVL 129 (260)
T ss_pred H-HHHHHhhhHHHHHHHHHHH
Confidence 2 4678899999999998875
No 135
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0023 Score=44.13 Aligned_cols=81 Identities=7% Similarity=-0.122 Sum_probs=50.6
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC---CcCh
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED---PVGL 68 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~---~~~~ 68 (91)
..+.|+.++.+.+........+ . .++.++.+|+. .. +.++ ..+|++||.|+....+. ..+.
T Consensus 42 il~~R~~~~~~~~~~~l~~~~~--~----~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~ 115 (313)
T PRK05854 42 ILPVRNRAKGEAAVAAIRTAVP--D----AKLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADG 115 (313)
T ss_pred EEEeCCHHHHHHHHHHHHHhCC--C----CceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccCCccccCccc
Confidence 4567887766544443221111 1 36889999998 44 3222 34899999999764321 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 042773 69 EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 69 ~~~~~~~nv~gt~nlLeaa~ 88 (91)
.+..+++|+.|...+.+.+.
T Consensus 116 ~e~~~~vN~~g~~~l~~~ll 135 (313)
T PRK05854 116 FELQFGTNHLGHFALTAHLL 135 (313)
T ss_pred HHHHhhhhhHHHHHHHHHHH
Confidence 35789999999888777664
No 136
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=96.86 E-value=0.00052 Score=47.00 Aligned_cols=54 Identities=22% Similarity=0.097 Sum_probs=33.4
Q ss_pred ecCcc-cc--ccccC--CCCEEEEcccCCCCCC-CcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 37 TPTLF-NG--RFTVE--GCKGVFCVATPRTLED-PVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 37 ~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~~-~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
..|+. .. ...+. ..|+|||+|+.+.+.. ..+| +..+..|+.++.+|.++|++.|
T Consensus 34 ~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p-~~a~~iN~~~~~~la~~~~~~~ 93 (286)
T PF04321_consen 34 DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVDACEKNP-EEAYAINVDATKNLAEACKERG 93 (286)
T ss_dssp CS-TTSHHHHHHHHHHH--SEEEE------HHHHHHSH-HHHHHHHTHHHHHHHHHHHHCT
T ss_pred hcCCCCHHHHHHHHHHhCCCeEeccceeecHHhhhhCh-hhhHHHhhHHHHHHHHHHHHcC
Confidence 45666 33 44444 4799999999987643 3566 4889999999999999998764
No 137
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0053 Score=41.34 Aligned_cols=58 Identities=16% Similarity=0.059 Sum_probs=41.9
Q ss_pred CCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCCC-----cChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLEDP-----VGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~~-----~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ .. ..+++ .+|+|||.|+....... +++ ..+++.|+.|+.++++++..
T Consensus 62 ~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~-~~~~~vN~~~~~~l~~~~~~ 134 (273)
T PRK08278 62 GQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRF-DLMQQINVRGTFLVSQACLP 134 (273)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHH-HHHHHHhchHHHHHHHHHHH
Confidence 46888999999 54 33332 68999999997543221 122 45788999999999999863
No 138
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.86 E-value=0.0042 Score=44.89 Aligned_cols=57 Identities=5% Similarity=-0.106 Sum_probs=43.2
Q ss_pred CeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCC--CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLED--PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~--~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
++..+.+|+. .+ .+.+.++|++||.||...... .+++ .+++++|+.|+.++++++..
T Consensus 225 ~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~-~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 225 PVKTLHWQVGQEAALAELLEKVDILIINHGINVHGERTPEAI-NKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred CeEEEEeeCCCHHHHHHHhCCCCEEEECCCcCCCCCCCHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 4667889999 55 666788999999998754321 2343 47899999999999999753
No 139
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0022 Score=42.33 Aligned_cols=78 Identities=9% Similarity=-0.030 Sum_probs=48.7
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC------C
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED------P 65 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~------~ 65 (91)
-++.|+.++...+...+.. .. .++.++.+|+. .. ..+++ .+|+|||.|+...... .
T Consensus 35 ~~~~r~~~~~~~~~~~~~~----~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~ 106 (253)
T PRK06172 35 VVADRDAAGGEETVALIRE----AG----GEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSE 106 (253)
T ss_pred EEEeCCHHHHHHHHHHHHh----cC----CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCH
Confidence 3566776654444443321 11 47889999999 54 43333 4699999998753211 1
Q ss_pred cChHHHHHHHHHHHHHHHHHHHH
Q 042773 66 VGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 66 ~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
+++ .+.+++|+.++..+++++.
T Consensus 107 ~~~-~~~~~~n~~~~~~~~~~~~ 128 (253)
T PRK06172 107 AEF-DAIMGVNVKGVWLCMKYQI 128 (253)
T ss_pred HHH-HHHHHHhhHHHHHHHHHHH
Confidence 233 4678899999988776543
No 140
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.83 E-value=0.0035 Score=41.56 Aligned_cols=57 Identities=4% Similarity=-0.165 Sum_probs=40.7
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC----cChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP----VGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~----~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|++ .. ..++ .++|+|||+|+....... +++ +..++.|+.|+.++++++.
T Consensus 60 ~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~ 130 (255)
T PRK06113 60 GQAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADF-RRAYELNVFSFFHLSQLVA 130 (255)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHH-HHHHHHhhhhHHHHHHHHH
Confidence 36778899999 54 3332 357999999997543211 232 3568999999999999986
No 141
>PRK06123 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.0026 Score=41.74 Aligned_cols=58 Identities=10% Similarity=-0.012 Sum_probs=41.1
Q ss_pred CCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCC-CC-----cChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLE-DP-----VGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~-~~-----~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ .. ..+++ .+|+|||.|+..... .. +++ ...++.|+.|+.++++++..
T Consensus 52 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 125 (248)
T PRK06123 52 GEALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARL-TRIFATNVVGSFLCAREAVK 125 (248)
T ss_pred CcEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHH
Confidence 36778999999 54 44333 579999999876421 11 122 36789999999999988764
No 142
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=96.82 E-value=0.0019 Score=39.55 Aligned_cols=58 Identities=16% Similarity=0.159 Sum_probs=41.2
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|+. .. ...+ ..+|+|||.|+...... ..++ +.++++|+.++.++++++++
T Consensus 53 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 125 (180)
T smart00822 53 AEVTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERF-AAVLAPKVDGAWNLHELTRD 125 (180)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHH-HHhhchHhHHHHHHHHHhcc
Confidence 46778999998 54 3332 34699999999753211 1233 46789999999999998864
No 143
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.82 E-value=0.0032 Score=42.27 Aligned_cols=77 Identities=8% Similarity=-0.070 Sum_probs=46.7
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC--------
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-------- 64 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-------- 64 (91)
.+.|+.++.+.+...+.. .. .++.++.+|+. .. ..++ ..+|++||.|+......
T Consensus 39 ~~~r~~~~~~~~~~~~~~----~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~ 110 (278)
T PRK08277 39 ILDRNQEKAEAVVAEIKA----AG----GEALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHE 110 (278)
T ss_pred EEeCCHHHHHHHHHHHHh----cC----CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccccccccc
Confidence 456665554444433211 11 36788999998 54 3332 36899999999643211
Q ss_pred ------------CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 65 ------------PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 65 ------------~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
..++ ...++.|+.++..+++++.
T Consensus 111 ~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~ 145 (278)
T PRK08277 111 LIEPTKTFFDLDEEGF-EFVFDLNLLGTLLPTQVFA 145 (278)
T ss_pred ccccccccccCCHHHH-HHHHhhhhHHHHHHHHHHH
Confidence 1222 3678889999987766553
No 144
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=96.81 E-value=0.0028 Score=41.19 Aligned_cols=58 Identities=12% Similarity=-0.034 Sum_probs=41.8
Q ss_pred CCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ .. ..++. .+|+|||.|+...... ..++ +..++.|+.++.++++++..
T Consensus 48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 120 (239)
T TIGR01830 48 VKALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDW-DAVIDTNLTGVFNLTQAVLR 120 (239)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHHHH
Confidence 36788999999 54 44433 4699999999764211 1333 46788999999999998864
No 145
>PRK09186 flagellin modification protein A; Provisional
Probab=96.80 E-value=0.0033 Score=41.43 Aligned_cols=81 Identities=14% Similarity=-0.015 Sum_probs=47.1
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCC----CC-Cc
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTL----ED-PV 66 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~----~~-~~ 66 (91)
..+.|++++...+........+ . ..+.++.+|+. ++ ..+++ .+|+|||.|+.... +. ..
T Consensus 32 ~~~~r~~~~~~~~~~~l~~~~~--~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~ 105 (256)
T PRK09186 32 IAADIDKEALNELLESLGKEFK--S----KKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDV 105 (256)
T ss_pred EEEecChHHHHHHHHHHHhhcC--C----CceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCccccccccCccccC
Confidence 4567777665544433211101 1 35778899999 55 44443 37999999975421 01 11
Q ss_pred Ch--HHHHHHHHHHHHHHHHHHHH
Q 042773 67 GL--EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 67 ~~--~~~~~~~nv~gt~nlLeaa~ 88 (91)
++ ....++.|+.++..+++++.
T Consensus 106 ~~~~~~~~~~~n~~~~~~~~~~~~ 129 (256)
T PRK09186 106 SLDDFNENLSLHLGSSFLFSQQFA 129 (256)
T ss_pred CHHHHHHHHHHhhhhHHHHHHHHH
Confidence 11 23567889888887776654
No 146
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.004 Score=41.10 Aligned_cols=58 Identities=10% Similarity=-0.029 Sum_probs=41.0
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-----cChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-----VGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-----~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|+. .. ...+ .++|+|||.|+....... .+. ..+++.|+.|+.++++++..
T Consensus 61 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 133 (255)
T PRK06841 61 GNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDW-DKTIDINLKGSFLMAQAVGR 133 (255)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHhcHHHHHHHHHHHH
Confidence 35678899999 54 3333 357999999998643211 122 35789999999999998864
No 147
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.0037 Score=40.58 Aligned_cols=78 Identities=17% Similarity=-0.011 Sum_probs=47.7
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC--CcCh
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED--PVGL 68 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~--~~~~ 68 (91)
|.++.|++++........ .. .+.+++.+|+. .. ..++ .++|+|||.|+...... ..++
T Consensus 34 v~~~~r~~~~~~~~~~~~----~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~ 103 (239)
T PRK12828 34 VALIGRGAAPLSQTLPGV----PA------DALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDA 103 (239)
T ss_pred EEEEeCChHhHHHHHHHH----hh------cCceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCH
Confidence 356677766543322211 11 25667889998 43 3333 36899999998754321 1122
Q ss_pred --HHHHHHHHHHHHHHHHHHHH
Q 042773 69 --EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 69 --~~~~~~~nv~gt~nlLeaa~ 88 (91)
..+.++.|+.++.++++++.
T Consensus 104 ~~~~~~~~~n~~~~~~~~~~~~ 125 (239)
T PRK12828 104 DTWDRMYGVNVKTTLNASKAAL 125 (239)
T ss_pred HHHHHHHHhhchhHHHHHHHHH
Confidence 13567899999999998875
No 148
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.0037 Score=41.36 Aligned_cols=59 Identities=10% Similarity=0.008 Sum_probs=41.1
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC--cCh--HHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP--VGL--EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~--~~~--~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ .. .+++ .++|+|||+|+....... .++ ...+++.|+.|+.++++++.+
T Consensus 56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 128 (260)
T PRK06198 56 AKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIK 128 (260)
T ss_pred CeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46888999998 54 3333 358999999997643211 122 135789999999999988753
No 149
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.78 E-value=0.0078 Score=39.16 Aligned_cols=58 Identities=12% Similarity=0.012 Sum_probs=41.5
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|+. .. ..++ .++|+|||+|+...... ..++ ...++.|+.++.++++++..
T Consensus 55 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 127 (248)
T PRK05557 55 GKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDW-DRVIDTNLTGVFNLTKAVAR 127 (248)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHHH
Confidence 47888999999 54 3333 36899999998764321 1222 36788999999999998864
No 150
>PRK09242 tropinone reductase; Provisional
Probab=96.77 E-value=0.0034 Score=41.60 Aligned_cols=80 Identities=6% Similarity=-0.101 Sum_probs=50.0
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccc-------cCCCCEEEEcccCCCCCC-----Cc
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFT-------VEGCKGVFCVATPRTLED-----PV 66 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~-------~~~~d~V~HlAa~~~~~~-----~~ 66 (91)
..+.|+.++...+...+....+ . .++.++++|+. .. ..+ +..+|+|||.|+...... .+
T Consensus 37 ~~~~r~~~~~~~~~~~l~~~~~--~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~ 110 (257)
T PRK09242 37 LIVARDADALAQARDELAEEFP--E----REVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTED 110 (257)
T ss_pred EEEeCCHHHHHHHHHHHHhhCC--C----CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHH
Confidence 3556776554444433321111 1 36788999998 54 222 246899999999743211 12
Q ss_pred ChHHHHHHHHHHHHHHHHHHHH
Q 042773 67 GLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 67 ~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
++ ...++.|+.|+.++++++.
T Consensus 111 ~~-~~~~~~n~~~~~~l~~~~~ 131 (257)
T PRK09242 111 EW-RGIFETNLFSAFELSRYAH 131 (257)
T ss_pred HH-HHHHhhhhHHHHHHHHHHH
Confidence 33 4678999999999998875
No 151
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.0041 Score=41.12 Aligned_cols=58 Identities=9% Similarity=-0.026 Sum_probs=39.9
Q ss_pred CCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC--CcChH--HHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED--PVGLE--KELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~--~~~~~--~~~~~~nv~gt~nlLeaa~ 88 (91)
.+++++.+|+. .. ..++. ++|+|||.|+...... ..++. ...++.|+.|+.++++++.
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 120 (257)
T PRK07074 49 ARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVL 120 (257)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 36888999998 54 33333 4899999998764322 12221 2446789999999998884
No 152
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.70 E-value=0.0052 Score=40.69 Aligned_cols=58 Identities=7% Similarity=-0.212 Sum_probs=40.0
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-c-Ch--HHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-V-GL--EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-~-~~--~~~~~~~nv~gt~nlLeaa~~ 89 (91)
++.++.+|++ .. ..++ ..+|+|||+|+....... . ++ ....++.|+.|+.++++++..
T Consensus 54 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (259)
T PRK12384 54 MAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSR 125 (259)
T ss_pred eeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 6888999999 44 3222 357999999987643211 1 11 235678999999988887753
No 153
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.70 E-value=0.0035 Score=40.75 Aligned_cols=57 Identities=12% Similarity=-0.014 Sum_probs=41.1
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|+. .. ..++ .++|.|||+|+....+. ..++ ...++.|+.++.++++.+.
T Consensus 56 ~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~ 127 (249)
T PRK12825 56 RRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEW-DEVIDVNLSGVFHLLRAVV 127 (249)
T ss_pred CceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHHH
Confidence 47889999998 44 4333 35799999999654322 1122 4678899999999999874
No 154
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.69 E-value=0.0045 Score=40.83 Aligned_cols=58 Identities=9% Similarity=0.116 Sum_probs=41.5
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCC--C-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLE--D-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~--~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++++|++ +. ..++ ..+|+|||.|+..... . ..++ ++.++.|+.|+.++++++.+
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 126 (256)
T PRK12745 52 VEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESF-DRVLAINLRGPFFLTQAVAK 126 (256)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHH-HHHHHhcchHHHHHHHHHHH
Confidence 47889999999 54 3333 3579999999875321 1 1232 46789999999999998753
No 155
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.0031 Score=42.23 Aligned_cols=58 Identities=17% Similarity=0.037 Sum_probs=39.9
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ .. ..++ .++|+|||.|+...... .+++ .+.++.|+.|+.++++++..
T Consensus 58 ~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~g~~~l~~~~~~ 130 (264)
T PRK07576 58 PEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGF-KTVVDIDLLGTFNVLKAAYP 130 (264)
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHH-HHHHHHHhHHHHHHHHHHHH
Confidence 36678899998 44 3332 35799999997543211 1222 46788999999999998763
No 156
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.64 E-value=0.0081 Score=39.21 Aligned_cols=57 Identities=11% Similarity=0.041 Sum_probs=40.6
Q ss_pred CCeEEEecCcc-cc--ccc-------cCCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFT-------VEGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~-------~~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.+++++.+|+. .. ..+ +.++|+|||.|+...... ..++ ..+++.|+.++.++++++.
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~ 123 (245)
T PRK12936 52 ERVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDW-DSVLEVNLTATFRLTRELT 123 (245)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHH-HHHHhhccHHHHHHHHHHH
Confidence 36788899998 44 333 245899999999764321 1233 4678999999999988875
No 157
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.0036 Score=42.36 Aligned_cols=58 Identities=10% Similarity=-0.154 Sum_probs=40.3
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-cCh---HHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-VGL---EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-~~~---~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|++ .. ..++ ..+|+|||.|+....... ..+ ....+++|+.|+.++++++.
T Consensus 55 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 126 (275)
T PRK05876 55 FDVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFL 126 (275)
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 36788999998 44 3333 247999999997543211 111 23578999999999998875
No 158
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.59 E-value=0.0031 Score=42.01 Aligned_cols=59 Identities=14% Similarity=-0.102 Sum_probs=40.3
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCC-CC-cC-------hHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLE-DP-VG-------LEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~-~~-~~-------~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++++|+. .. ..++ ..+|++||.|+..... .. .. ..+++++.|+.|+.++++++..
T Consensus 51 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 128 (262)
T TIGR03325 51 DAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALP 128 (262)
T ss_pred CceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHH
Confidence 36788999998 54 3333 3579999999864211 11 11 1236789999999999998864
No 159
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.58 E-value=0.0077 Score=39.65 Aligned_cols=79 Identities=13% Similarity=-0.026 Sum_probs=47.7
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc----c-------cccCCCCEEEEcccCCCCC----C-
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG----R-------FTVEGCKGVFCVATPRTLE----D- 64 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~----~-------~~~~~~d~V~HlAa~~~~~----~- 64 (91)
.++.|+.++...+...+... + . .++.++.+|+. .+ . +.+..+|+|||.|+..... .
T Consensus 40 i~~~r~~~~~~~~~~~l~~~--~-~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~ 112 (247)
T PRK08945 40 ILLGRTEEKLEAVYDEIEAA--G-G----PQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQ 112 (247)
T ss_pred EEEeCCHHHHHHHHHHHHhc--C-C----CCceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccC
Confidence 45667766554444433211 1 1 36677777775 21 1 1223589999999875321 1
Q ss_pred -CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 65 -PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 65 -~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
..++ .+.++.|+.|+.++++++.
T Consensus 113 ~~~~~-~~~~~~n~~g~~~~~~~~~ 136 (247)
T PRK08945 113 DPEVW-QDVMQVNVNATFMLTQALL 136 (247)
T ss_pred CHHHH-HHHHHHccHHHHHHHHHHH
Confidence 1223 4678999999999998874
No 160
>PRK07069 short chain dehydrogenase; Validated
Probab=96.58 E-value=0.012 Score=38.56 Aligned_cols=57 Identities=11% Similarity=-0.006 Sum_probs=36.4
Q ss_pred eEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-c-Ch--HHHHHHHHHH----HHHHHHHHHHH
Q 042773 33 LAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-V-GL--EKELALPAVQ----GTLNVLEAAKR 89 (91)
Q Consensus 33 ~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-~-~~--~~~~~~~nv~----gt~nlLeaa~~ 89 (91)
+.++.+|+. .. ..++ .++|+|||.|+....... . ++ ....++.|+. ++..+++++++
T Consensus 53 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 127 (251)
T PRK07069 53 AFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRA 127 (251)
T ss_pred EEEEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 445788998 44 3332 358999999998754321 1 11 1356778887 77777777764
No 161
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=96.58 E-value=0.0012 Score=45.39 Aligned_cols=86 Identities=12% Similarity=0.005 Sum_probs=57.5
Q ss_pred CeeecCCCCCh--hhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC--CCCEEEEcccCCCCC-CCcChHHHH
Q 042773 1 MNAAIFPGSDP--SHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE--GCKGVFCVATPRTLE-DPVGLEKEL 72 (91)
Q Consensus 1 ~~~~vr~~~k~--~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~-~~~~~~~~~ 72 (91)
||+.+|-.+.. +.+..+|..-..+.. ..+.+..+|++ .. .+.+. ..+-|+|||+.+++. ++.-| +..
T Consensus 55 VHGiiRRsSsFNT~RIeHlY~nP~~h~~----~~mkLHYgDmTDss~L~k~I~~ikPtEiYnLaAQSHVkvSFdlp-eYT 129 (376)
T KOG1372|consen 55 VHGIIRRSSSFNTARIEHLYSNPHTHNG----ASMKLHYGDMTDSSCLIKLISTIKPTEVYNLAAQSHVKVSFDLP-EYT 129 (376)
T ss_pred eeEEEeeccccchhhhhhhhcCchhccc----ceeEEeeccccchHHHHHHHhccCchhhhhhhhhcceEEEeecc-cce
Confidence 67777766544 355566644111112 46778889999 44 44444 358899999999875 34444 456
Q ss_pred HHHHHHHHHHHHHHHHHcC
Q 042773 73 ALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 73 ~~~nv~gt~nlLeaa~~~g 91 (91)
.++.--||+.||+|.+.++
T Consensus 130 AeVdavGtLRlLdAi~~c~ 148 (376)
T KOG1372|consen 130 AEVDAVGTLRLLDAIRACR 148 (376)
T ss_pred eeccchhhhhHHHHHHhcC
Confidence 7777789999999998764
No 162
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.0076 Score=40.36 Aligned_cols=55 Identities=5% Similarity=-0.093 Sum_probs=41.6
Q ss_pred EEEecCcc-cc--ccccCCCCEEEEcccCCCCCC--CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 34 AYWTPTLF-NG--RFTVEGCKGVFCVATPRTLED--PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 34 ~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~--~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.+|++ .. ...+..+|++||.|+...... .+++ .+.+++|+.|+.++++++..
T Consensus 61 ~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 61 EWIKWECGKEESLDKQLASLDVLILNHGINPGGRQDPENI-NKALEINALSSWRLLELFED 120 (245)
T ss_pred eEEEeeCCCHHHHHHhcCCCCEEEECCccCCcCCCCHHHH-HHHHHHHhHHHHHHHHHHHH
Confidence 56789999 54 666678999999999754321 2344 47899999999999998753
No 163
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.01 Score=39.64 Aligned_cols=57 Identities=7% Similarity=-0.161 Sum_probs=39.1
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-c-C--hHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-V-G--LEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-~-~--~~~~~~~~nv~gt~nlLeaa~ 88 (91)
++.++.+|+. +. ..++ .++|++||.|+....... . + ....+++.|+.|+.++.+++.
T Consensus 51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~ 121 (273)
T PRK07825 51 LVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAA 121 (273)
T ss_pred cceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778899999 44 2222 357999999998643221 1 1 124578899999999887764
No 164
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.0062 Score=42.50 Aligned_cols=79 Identities=8% Similarity=-0.166 Sum_probs=47.5
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC--cCh-
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP--VGL- 68 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~--~~~- 68 (91)
..+.|++++.+.+...+.. .. .++.++.+|++ .. +.++ ..+|++||.|+....... .++
T Consensus 36 vl~~R~~~~l~~~~~~l~~----~g----~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~ 107 (334)
T PRK07109 36 VLLARGEEGLEALAAEIRA----AG----GEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPE 107 (334)
T ss_pred EEEECCHHHHHHHHHHHHH----cC----CcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHH
Confidence 3456776665555443321 11 47888999999 54 3332 368999999987533211 111
Q ss_pred -HHHHHHHHHHHHHHHHHHHH
Q 042773 69 -EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 69 -~~~~~~~nv~gt~nlLeaa~ 88 (91)
.+..+++|+.|+.++..++.
T Consensus 108 ~~~~~~~vN~~g~~~~~~~~l 128 (334)
T PRK07109 108 EFRRVTEVTYLGVVHGTLAAL 128 (334)
T ss_pred HHHHHHHHHhHHHHHHHHHHH
Confidence 23568888887777665543
No 165
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.0079 Score=42.06 Aligned_cols=78 Identities=5% Similarity=-0.145 Sum_probs=49.5
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-cCh---
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-VGL--- 68 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-~~~--- 68 (91)
.+.|++++.+.+...+.. .. .++.++.+|++ .+ ..++ ..+|++||.|+....... ..+
T Consensus 36 l~~R~~~~l~~~~~~~~~----~g----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~ 107 (330)
T PRK06139 36 LAARDEEALQAVAEECRA----LG----AEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEA 107 (330)
T ss_pred EEECCHHHHHHHHHHHHh----cC----CcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHH
Confidence 456776665544443321 11 36778889999 54 3333 358999999997644221 111
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 042773 69 EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 69 ~~~~~~~nv~gt~nlLeaa~ 88 (91)
.+.++++|+.|+.++.+++.
T Consensus 108 ~~~~~~vN~~g~~~~~~~~l 127 (330)
T PRK06139 108 HEQVIQTNLIGYMRDAHAAL 127 (330)
T ss_pred HHHHHHhhhHHHHHHHHHHH
Confidence 13578999999999887764
No 166
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.007 Score=39.90 Aligned_cols=58 Identities=7% Similarity=-0.095 Sum_probs=38.7
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCC--CC---CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTL--ED---PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~--~~---~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++++|+. .. ..++ ..+|+|||.|+.... +. ..+..+..++.|+.++.++++++.
T Consensus 57 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 129 (252)
T PRK07035 57 GKAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAG 129 (252)
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 36778899998 44 3332 358999999986421 11 111123678899999999888774
No 167
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.51 E-value=0.0053 Score=40.44 Aligned_cols=58 Identities=17% Similarity=0.132 Sum_probs=40.3
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|+. +. ..++ ..+|+|||.|+...... ..+. +..+++|+.++..+++++..
T Consensus 49 ~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~ 121 (254)
T TIGR02415 49 GKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEEL-KKVYNVNVKGVLFGIQAAAR 121 (254)
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHH-HHHHhhhhHHHHHHHHHHHH
Confidence 46888999999 54 3332 35799999998754321 1222 36788999999988877653
No 168
>PRK07041 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.0048 Score=40.10 Aligned_cols=57 Identities=11% Similarity=-0.029 Sum_probs=40.9
Q ss_pred CCeEEEecCcc-cc--ccccC---CCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE---GCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~---~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.+++++.+|++ .. ..+++ .+|.+||.|+...... .+++ ..+++.|+.++.+++++..
T Consensus 45 ~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~ 112 (230)
T PRK07041 45 APVRTAALDITDEAAVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAA-QAAMDSKFWGAYRVARAAR 112 (230)
T ss_pred CceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHHHHHHHHHHhhhh
Confidence 47889999999 55 44443 4799999998754321 1233 4678999999999988544
No 169
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.48 E-value=0.0067 Score=40.12 Aligned_cols=58 Identities=7% Similarity=-0.074 Sum_probs=40.2
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|+. ++ ...+ ..+|+|||.|+...... ..++ +.+++.|+.|+.++++++..
T Consensus 58 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 130 (254)
T PRK08085 58 IKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEW-NDVIAVNQTAVFLVSQAVAR 130 (254)
T ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHH
Confidence 36777889999 54 3333 34799999998753211 1222 35789999999999988764
No 170
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.0066 Score=39.98 Aligned_cols=59 Identities=12% Similarity=-0.022 Sum_probs=40.5
Q ss_pred CCeEEEecCcc-cc--ccccC----CCCEEEEcccCCCCCC--CcCh--HHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE----GCKGVFCVATPRTLED--PVGL--EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~----~~d~V~HlAa~~~~~~--~~~~--~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ .+ ..+++ ..|.++|.|+...... ..++ ...+++.|+.|+.++++++..
T Consensus 46 ~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 115 (240)
T PRK06101 46 ANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQP 115 (240)
T ss_pred CCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36788999999 54 44443 3588999887643211 1222 136799999999999998864
No 171
>PRK05855 short chain dehydrogenase; Validated
Probab=96.43 E-value=0.0061 Score=44.54 Aligned_cols=78 Identities=6% Similarity=-0.175 Sum_probs=50.3
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC-C----c
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED-P----V 66 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~-~----~ 66 (91)
..+.|+.++.+.+...... .. .++.++.+|++ +. ...++ .+|.+||.|+...... . .
T Consensus 343 ~~~~r~~~~~~~~~~~~~~----~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~ 414 (582)
T PRK05855 343 VASDIDEAAAERTAELIRA----AG----AVAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAE 414 (582)
T ss_pred EEEeCCHHHHHHHHHHHHh----cC----CeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHH
Confidence 3456776655544443321 11 46888999999 55 33332 4799999999864321 1 2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHH
Q 042773 67 GLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 67 ~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
+. ..++++|+.|+.++++++.
T Consensus 415 ~~-~~~~~~n~~g~~~~~~~~~ 435 (582)
T PRK05855 415 DW-DRVLDVNLWGVIHGCRLFG 435 (582)
T ss_pred HH-HHHHHHhhHHHHHHHHHHH
Confidence 22 3678899999999988764
No 172
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.0047 Score=40.25 Aligned_cols=57 Identities=7% Similarity=-0.030 Sum_probs=38.4
Q ss_pred CeEEEecCcc-cc--ccccC-----CCCEEEEcccCCCCC--C-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTVE-----GCKGVFCVATPRTLE--D-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~~-----~~d~V~HlAa~~~~~--~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
++.++.+|+. .. +.+++ ++|+|||.|+..... . ..+. ...++.|+.++..+++++..
T Consensus 46 ~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 117 (225)
T PRK08177 46 GVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEI-GQLFLTNAIAPIRLARRLLG 117 (225)
T ss_pred ccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHH-hhheeeeeeHHHHHHHHHHH
Confidence 5667889998 54 33332 589999999876321 1 1122 35677899999999888753
No 173
>PRK06128 oxidoreductase; Provisional
Probab=96.41 E-value=0.01 Score=40.54 Aligned_cols=58 Identities=17% Similarity=0.061 Sum_probs=41.7
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCC-C-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLE-D-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~-~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|+. .. ..++ .++|+|||.|+..... . .+++ ..++++|+.|+.++++++..
T Consensus 106 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~ 179 (300)
T PRK06128 106 RKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQF-DATFKTNVYAMFWLCKAAIP 179 (300)
T ss_pred CeEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHH
Confidence 36778999999 54 3333 3689999999975321 1 1233 47899999999999999864
No 174
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.0063 Score=40.43 Aligned_cols=55 Identities=9% Similarity=-0.015 Sum_probs=38.6
Q ss_pred CeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC-C-----cChHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED-P-----VGLEKELALPAVQGTLNVLEAA 87 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~-~-----~~~~~~~~~~nv~gt~nlLeaa 87 (91)
++.++.+|++ .. .++++ .+|++||.|+...... . .++ ...+++|+.|+.+++++.
T Consensus 51 ~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~-~~~~~~n~~g~~~l~~~~ 121 (257)
T PRK07024 51 RVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVF-REVMDTNYFGMVATFQPF 121 (257)
T ss_pred eeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHH-HHHHhHhcHHHHHHHHHH
Confidence 6888999999 54 43332 3799999999754211 1 223 467899999999988744
No 175
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.019 Score=38.27 Aligned_cols=58 Identities=9% Similarity=-0.008 Sum_probs=40.8
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|+. .. ..++ ..+|++||.|+...... .+++ .+.++.|+.++.++++++..
T Consensus 52 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~ 123 (261)
T PRK08265 52 ERARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADW-LAALDVNLVSAAMLAQAAHP 123 (261)
T ss_pred CeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHH-HHHHhHhhHHHHHHHHHHHH
Confidence 36888999999 54 3333 35799999998753211 1233 46788999999999988753
No 176
>PRK06398 aldose dehydrogenase; Validated
Probab=96.37 E-value=0.014 Score=38.95 Aligned_cols=58 Identities=7% Similarity=-0.059 Sum_probs=40.6
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-c-Ch--HHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-V-GL--EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-~-~~--~~~~~~~nv~gt~nlLeaa~~ 89 (91)
++.++.+|++ +. ..++ ..+|+|||.|+....... . ++ ...+++.|+.|+.++++++..
T Consensus 45 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 116 (258)
T PRK06398 45 DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIP 116 (258)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 6788999999 54 3333 358999999997543211 1 11 235689999999999988753
No 177
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.01 Score=39.39 Aligned_cols=58 Identities=7% Similarity=-0.016 Sum_probs=41.6
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ .. ..++ ..+|++||.|+...... ..++ +.+++.|+.|+.++++++..
T Consensus 61 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~~~~~~~~ 133 (257)
T PRK12744 61 AKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEY-DEMFAVNSKSAFFFIKEAGR 133 (257)
T ss_pred CcEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHH-HHHHhhhhhHHHHHHHHHHH
Confidence 37888999999 54 3333 35899999999753221 1233 46788999999999998864
No 178
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.012 Score=40.13 Aligned_cols=58 Identities=9% Similarity=-0.063 Sum_probs=41.5
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCC-CC-----cChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLE-DP-----VGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~-~~-----~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ .. +.++ ..+|+|||.|+..... .. +++ ...++.|+.|+.++++++..
T Consensus 96 ~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~a~~~ 169 (290)
T PRK06701 96 VKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQL-DKTFKTNIYSYFHMTKAALP 169 (290)
T ss_pred CeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHH-HHHHhhhhHHHHHHHHHHHH
Confidence 36788999998 44 3333 2579999999975321 11 222 36789999999999999864
No 179
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.32 E-value=0.0096 Score=39.35 Aligned_cols=58 Identities=5% Similarity=-0.056 Sum_probs=40.4
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-----cChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-----VGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-----~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|+. .. ..++ ..+|+|||.|+....... .++ ++.++.|+.|+.++.+++..
T Consensus 60 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~ 132 (256)
T PRK06124 60 GAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAI-RALLETDLVAPILLSRLAAQ 132 (256)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHH
Confidence 46888999999 54 3333 246999999997543211 222 36788999999999977753
No 180
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.0099 Score=39.30 Aligned_cols=58 Identities=10% Similarity=-0.060 Sum_probs=41.1
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-----cChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-----VGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-----~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++++|+. .. ..++ ..+|+|||.|+....... .+. ..+++.|+.|+.++++++..
T Consensus 47 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 119 (252)
T PRK07856 47 RPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFH-EKIVELNLLAPLLVAQAANA 119 (252)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHHH
Confidence 36788999998 54 4433 246999999987543211 122 46789999999999998753
No 181
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=96.27 E-value=0.01 Score=40.07 Aligned_cols=61 Identities=16% Similarity=0.141 Sum_probs=40.4
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc------CC-CCEEEEcccCCCCCCCcChHH
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV------EG-CKGVFCVATPRTLEDPVGLEK 70 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~------~~-~d~V~HlAa~~~~~~~~~~~~ 70 (91)
||+.+|+.++.. . ++++.+.+|+. ++ ..++ +| +|.|||+++... +.
T Consensus 26 V~~~~R~~~~~~----------~-------~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~-----~~-- 81 (285)
T TIGR03649 26 FLVASRSSSSSA----------G-------PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIP-----DL-- 81 (285)
T ss_pred EEEEeCCCcccc----------C-------CCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCC-----Ch--
Confidence 678888877531 0 35566778998 55 6666 67 999999876431 11
Q ss_pred HHHHHHHHHHHHHHHHHHHcC
Q 042773 71 ELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 71 ~~~~~nv~gt~nlLeaa~~~g 91 (91)
...+.+++++|+++|
T Consensus 82 ------~~~~~~~i~aa~~~g 96 (285)
T TIGR03649 82 ------APPMIKFIDFARSKG 96 (285)
T ss_pred ------hHHHHHHHHHHHHcC
Confidence 124467888888765
No 182
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.25 E-value=0.0076 Score=39.47 Aligned_cols=57 Identities=9% Similarity=-0.005 Sum_probs=37.7
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCC--------------CCcChHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLE--------------DPVGLEKELALPAVQGTLNVLEA 86 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~--------------~~~~~~~~~~~~nv~gt~nlLea 86 (91)
.++.++.+|++ .. .+++ ..+|+|||.|+..... ...+. ..+++.|+.|+.+++++
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~ 132 (253)
T PRK08217 54 TEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQF-QSVIDVNLTGVFLCGRE 132 (253)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHH-HHHHhhhhHHHHHHHHH
Confidence 47888999998 44 3322 2479999999864311 01222 35778899999988765
Q ss_pred HH
Q 042773 87 AK 88 (91)
Q Consensus 87 a~ 88 (91)
+.
T Consensus 133 ~~ 134 (253)
T PRK08217 133 AA 134 (253)
T ss_pred HH
Confidence 54
No 183
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.011 Score=44.25 Aligned_cols=78 Identities=10% Similarity=-0.024 Sum_probs=49.9
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC---C---
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED---P--- 65 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~---~--- 65 (91)
.++.|+.++.+.+...... .. .++.++.+|+. .. ..+++ .+|++||.|+....+. .
T Consensus 399 ~~~~r~~~~~~~~~~~~~~----~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~ 470 (657)
T PRK07201 399 FLVARNGEALDELVAEIRA----KG----GTAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDR 470 (657)
T ss_pred EEEECCHHHHHHHHHHHHh----cC----CcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCC
Confidence 4566776655544443221 11 47888999999 54 44433 5899999999753211 1
Q ss_pred -cChHHHHHHHHHHHHHHHHHHHH
Q 042773 66 -VGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 66 -~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
+++ ..++++|+.|+.+++.++.
T Consensus 471 ~~~~-~~~~~~N~~g~~~l~~~~~ 493 (657)
T PRK07201 471 FHDY-ERTMAVNYFGAVRLILGLL 493 (657)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHH
Confidence 233 4678999999998877753
No 184
>PLN00015 protochlorophyllide reductase
Probab=96.20 E-value=0.013 Score=40.24 Aligned_cols=78 Identities=9% Similarity=-0.166 Sum_probs=47.8
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCC-C--CcC--
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLE-D--PVG-- 67 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~-~--~~~-- 67 (91)
.+.|+.++...+.... +... .++.++.+|+. .. +.++ ..+|++||.|+..... . ..+
T Consensus 27 ~~~r~~~~~~~~~~~l----~~~~----~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~ 98 (308)
T PLN00015 27 MACRDFLKAERAAKSA----GMPK----DSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTAD 98 (308)
T ss_pred EEeCCHHHHHHHHHHh----cCCC----CeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHH
Confidence 4567766554444432 1111 46788899998 44 3222 3589999999875321 1 111
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 042773 68 LEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 68 ~~~~~~~~nv~gt~nlLeaa~ 88 (91)
..+..+++|+.|+..+++.+.
T Consensus 99 ~~~~~~~vN~~g~~~l~~~~l 119 (308)
T PLN00015 99 GFELSVGTNHLGHFLLSRLLL 119 (308)
T ss_pred HHHHHHHHHhHHHHHHHHHHH
Confidence 124688999999888877654
No 185
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=96.19 E-value=0.013 Score=38.15 Aligned_cols=57 Identities=7% Similarity=-0.118 Sum_probs=38.6
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|+. .. ..++ ..+|+|||.|+...... ..++ ...++.|+.++..+++++.
T Consensus 50 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~ 121 (242)
T TIGR01829 50 FDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQW-SAVIDTNLNSVFNVTQPVI 121 (242)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHH
Confidence 47888999999 54 3332 35899999998764311 1222 4678889999888766553
No 186
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.032 Score=37.05 Aligned_cols=80 Identities=8% Similarity=-0.166 Sum_probs=48.2
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccc-------cCCCCEEEEcccCCCCCCC-----c
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFT-------VEGCKGVFCVATPRTLEDP-----V 66 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~-------~~~~d~V~HlAa~~~~~~~-----~ 66 (91)
..+.|+.++.+.+.+..... ... .++.++.+|++ .. ..+ +..+|++||.|+....... .
T Consensus 36 ~~~~r~~~~~~~~~~~~~~~--~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~ 109 (265)
T PRK07062 36 AICGRDEERLASAEARLREK--FPG----ARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDD 109 (265)
T ss_pred EEEeCCHHHHHHHHHHHHhh--CCC----ceEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHH
Confidence 45678877655544433211 111 36778899999 54 332 2358999999997543211 1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHH
Q 042773 67 GLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 67 ~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
+. ...++.|+.+...+++++.
T Consensus 110 ~~-~~~~~~n~~~~~~~~~~~~ 130 (265)
T PRK07062 110 AW-RDELELKYFSVINPTRAFL 130 (265)
T ss_pred HH-HHHHHHHhHHHHHHHHHHH
Confidence 22 3567888888877776653
No 187
>PRK12743 oxidoreductase; Provisional
Probab=96.18 E-value=0.018 Score=38.14 Aligned_cols=58 Identities=14% Similarity=-0.030 Sum_probs=41.8
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|+. .. ..++ ..+|+|||.|+...... ..++ ..+++.|+.|+.++++++..
T Consensus 52 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 124 (256)
T PRK12743 52 VRAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEW-RKIFTVDVDGAFLCSQIAAR 124 (256)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHHHH
Confidence 47889999999 54 3333 25799999998764321 1233 46789999999999998764
No 188
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.17 E-value=0.016 Score=38.66 Aligned_cols=57 Identities=7% Similarity=-0.115 Sum_probs=39.9
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|++ .. ..++ ..+|+|||.|+...... ..++ ...++.|+.|...+++++.
T Consensus 59 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~ 130 (265)
T PRK07097 59 IEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDF-RQVIDIDLNAPFIVSKAVI 130 (265)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHH-HHHHHhhhHHHHHHHHHHH
Confidence 36888999999 54 3333 34799999999865321 1222 3678889999998888765
No 189
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.15 E-value=0.013 Score=38.54 Aligned_cols=57 Identities=9% Similarity=0.011 Sum_probs=41.8
Q ss_pred CCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++++|+. .. ..+++ .+|+|||.|+...... ..++ ...++.|+.++.++++++.
T Consensus 48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~ 119 (252)
T PRK08220 48 YPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDW-QQTFAVNAGGAFNLFRAVM 119 (252)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHH
Confidence 46888999999 54 44433 4799999999864321 1233 4678999999999999875
No 190
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.015 Score=37.98 Aligned_cols=58 Identities=14% Similarity=0.063 Sum_probs=41.5
Q ss_pred CCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|+. .. .++++ ++|+|||.|+...... ..+. +..++.|+.|+.++++++.+
T Consensus 55 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~ 127 (245)
T PRK12937 55 GRAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDF-DRTIATNLRGAFVVLREAAR 127 (245)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHH-HHHHhhhchHHHHHHHHHHH
Confidence 47889999999 44 44433 6899999999754211 1222 35788999999999988764
No 191
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.11 E-value=0.026 Score=37.34 Aligned_cols=58 Identities=14% Similarity=-0.093 Sum_probs=41.0
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-----cChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-----VGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-----~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ .. ..++ ..+|+|||.|+....... .++ +..++.|+.|+.++++++..
T Consensus 67 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 139 (256)
T PRK12748 67 VRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQL-DKHYAVNVRATMLLSSAFAK 139 (256)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHH
Confidence 46889999999 44 2222 357999999987533211 222 35688999999999998753
No 192
>PRK08017 oxidoreductase; Provisional
Probab=96.09 E-value=0.019 Score=37.81 Aligned_cols=53 Identities=11% Similarity=-0.056 Sum_probs=34.2
Q ss_pred CeEEEecCcc-cc--cccc--------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV--------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLE 85 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~--------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLe 85 (91)
+++++.+|+. .. ..++ ..+|.++|.|+...... ..++ ++.++.|+.|+.++.+
T Consensus 46 ~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~-~~~~~~n~~g~~~~~~ 114 (256)
T PRK08017 46 GFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQM-EQQFSTNFFGTHQLTM 114 (256)
T ss_pred CCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHH-HHHHHHhhHHHHHHHH
Confidence 4667888988 43 2222 34689999998654221 1122 3678999999988643
No 193
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.034 Score=36.96 Aligned_cols=56 Identities=11% Similarity=-0.057 Sum_probs=39.6
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-----cChHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-----VGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-----~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
++.++.+|+. +. ..++ ..+|+|||.|+....... .+. ...++.|+.|+..+++++.
T Consensus 70 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~ 140 (262)
T PRK07831 70 RVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEW-SRVLDVTLTGTFRATRAAL 140 (262)
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHH
Confidence 6888999999 54 3333 357999999997532211 222 3568889999999888875
No 194
>PRK08324 short chain dehydrogenase; Validated
Probab=96.04 E-value=0.023 Score=43.40 Aligned_cols=77 Identities=12% Similarity=-0.083 Sum_probs=49.8
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-----c
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-----V 66 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-----~ 66 (91)
.++.|+.++...+...+ ... .++.++.+|++ .. ..++ .++|+|||.|+....... .
T Consensus 450 vl~~r~~~~~~~~~~~l----~~~-----~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~ 520 (681)
T PRK08324 450 VLADLDEEAAEAAAAEL----GGP-----DRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDE 520 (681)
T ss_pred EEEeCCHHHHHHHHHHH----hcc-----CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHH
Confidence 34567765544443322 111 37888999999 54 3333 368999999997643211 2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHH
Q 042773 67 GLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 67 ~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
++ ...+++|+.|+.++++++.
T Consensus 521 ~~-~~~~~~N~~g~~~l~~~~~ 541 (681)
T PRK08324 521 DW-RRSFDVNATGHFLVAREAV 541 (681)
T ss_pred HH-HHHHHHHhHHHHHHHHHHH
Confidence 22 3678899999999988875
No 195
>PTZ00325 malate dehydrogenase; Provisional
Probab=96.00 E-value=0.025 Score=39.79 Aligned_cols=45 Identities=11% Similarity=0.019 Sum_probs=36.7
Q ss_pred cccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 45 FTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 45 ~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
+.++|+|+|+++|+....+. .+. .+.++.|+.++.+++++.+++|
T Consensus 72 ~~l~gaDvVVitaG~~~~~~-~tR-~dll~~N~~i~~~i~~~i~~~~ 116 (321)
T PTZ00325 72 KALRGADLVLICAGVPRKPG-MTR-DDLFNTNAPIVRDLVAAVASSA 116 (321)
T ss_pred HHhCCCCEEEECCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHHC
Confidence 67889999999999865422 344 4789999999999999998764
No 196
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.00 E-value=0.0072 Score=39.97 Aligned_cols=52 Identities=15% Similarity=0.084 Sum_probs=39.0
Q ss_pred EEEecCcc-cc--ccccC----CCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 34 AYWTPTLF-NG--RFTVE----GCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 34 ~~v~~Dl~-~~--~~~~~----~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
+++++|++ .+ ..+++ ++|+|||.|+.... .++ +..++.|+.|+..+++++..
T Consensus 26 ~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~---~~~-~~~~~vN~~~~~~l~~~~~~ 84 (241)
T PRK12428 26 GFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT---APV-ELVARVNFLGLRHLTEALLP 84 (241)
T ss_pred HhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC---CCH-HHhhhhchHHHHHHHHHHHH
Confidence 46778998 44 44443 58999999987532 344 57899999999999998864
No 197
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.023 Score=38.74 Aligned_cols=57 Identities=12% Similarity=0.022 Sum_probs=39.3
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC--cCh--HHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP--VGL--EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~--~~~--~~~~~~~nv~gt~nlLeaa~ 88 (91)
.+.++.+|++ .. ..++ ..+|+|||.|+....... .++ .++++++|+.|+.++++++.
T Consensus 58 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~ 128 (296)
T PRK05872 58 RVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATL 128 (296)
T ss_pred cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 5666779999 54 3332 358999999998643211 122 24678899999999998875
No 198
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.00 E-value=0.021 Score=37.53 Aligned_cols=58 Identities=9% Similarity=-0.069 Sum_probs=38.9
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCC-CC--cCh--HHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLE-DP--VGL--EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~-~~--~~~--~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|+. .. ..++ ..+|+|||.|+..... .. ..+ ....++.|+.|+..+++++.
T Consensus 52 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 124 (248)
T PRK06947 52 GRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAA 124 (248)
T ss_pred CcEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHH
Confidence 47889999998 54 3322 3589999999975321 11 111 13568899999988876543
No 199
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.97 E-value=0.011 Score=39.42 Aligned_cols=76 Identities=12% Similarity=-0.135 Sum_probs=47.3
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCC-CC-c-Ch-
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLE-DP-V-GL- 68 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~-~~-~-~~- 68 (91)
.+.|++++.+.+.... + .++.++++|+. .. ..++ ..+|++||.|+..... .. . ++
T Consensus 35 ~~~r~~~~~~~~~~~~----~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~ 103 (263)
T PRK06200 35 VLERSAEKLASLRQRF----G-------DHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAE 103 (263)
T ss_pred EEeCCHHHHHHHHHHh----C-------CcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChh
Confidence 4556665544444331 1 36788999998 54 3332 3589999999975321 11 1 11
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHH
Q 042773 69 -----EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 69 -----~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.+.+++.|+.++..+++++..
T Consensus 104 ~~~~~~~~~~~~n~~~~~~~~~~~~~ 129 (263)
T PRK06200 104 TLDTAFDEIFNVNVKGYLLGAKAALP 129 (263)
T ss_pred HHHHHHHHHeeeccHhHHHHHHHHHH
Confidence 235678899999999888763
No 200
>PLN00106 malate dehydrogenase
Probab=95.86 E-value=0.031 Score=39.33 Aligned_cols=46 Identities=13% Similarity=-0.042 Sum_probs=37.2
Q ss_pred ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 44 RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 44 ~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
.++++|+|+|+|+|+....+. .+. .+.+..|+..+.++.+.+++++
T Consensus 81 ~~~l~~aDiVVitAG~~~~~g-~~R-~dll~~N~~i~~~i~~~i~~~~ 126 (323)
T PLN00106 81 GDALKGADLVIIPAGVPRKPG-MTR-DDLFNINAGIVKTLCEAVAKHC 126 (323)
T ss_pred HHHcCCCCEEEEeCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHHC
Confidence 467899999999999875432 344 4789999999999999998764
No 201
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=95.83 E-value=0.032 Score=36.36 Aligned_cols=56 Identities=5% Similarity=-0.078 Sum_probs=38.9
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAA 87 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa 87 (91)
.++.++.+|+. .. ..++ ..+|+|||.|+...... ..++ ..+++.|+.|+.++..++
T Consensus 52 ~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~ 122 (245)
T PRK12824 52 DQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEW-NDVINTNLNSVFNVTQPL 122 (245)
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHH-HHHHHHHhHHHHHHHHHH
Confidence 46889999999 54 3333 24899999998764211 1233 367889999999986654
No 202
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.024 Score=37.12 Aligned_cols=80 Identities=6% Similarity=-0.138 Sum_probs=46.8
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc----ccc-------c-CCCCEEEEcccCCCC--C-C-
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG----RFT-------V-EGCKGVFCVATPRTL--E-D- 64 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~----~~~-------~-~~~d~V~HlAa~~~~--~-~- 64 (91)
.++.|++++...+...+.. ... +...++.+|+. .. ... + ..+|+|||.|+.... + .
T Consensus 34 ~~~~r~~~~~~~~~~~l~~---~~~----~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~ 106 (239)
T PRK08703 34 ILVARHQKKLEKVYDAIVE---AGH----PEPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDF 106 (239)
T ss_pred EEEeCChHHHHHHHHHHHH---cCC----CCcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccc
Confidence 4566777655444333211 111 34566778875 21 111 2 357999999996422 1 1
Q ss_pred --CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 65 --PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 65 --~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
..++ .+.+++|+.|+.++++++..
T Consensus 107 ~~~~~~-~~~~~~n~~g~~~l~~~~~~ 132 (239)
T PRK08703 107 QTVAEW-VNQYRINTVAPMGLTRALFP 132 (239)
T ss_pred cCHHHH-HHHHHHhhhHHHHHHHHHHH
Confidence 1222 35789999999999988754
No 203
>PRK06057 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.021 Score=37.79 Aligned_cols=55 Identities=9% Similarity=-0.056 Sum_probs=36.6
Q ss_pred EEEecCcc-cc--ccccC-------CCCEEEEcccCCCCC--CC-c---ChHHHHHHHHHHHHHHHHHHHH
Q 042773 34 AYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLE--DP-V---GLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 34 ~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~--~~-~---~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.+|+. .. ...++ .+|+|||.|+..... .. . +..+..++.|+.|+.++++.+.
T Consensus 54 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 124 (255)
T PRK06057 54 LFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAAL 124 (255)
T ss_pred cEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHH
Confidence 47889998 44 33332 579999999875321 11 1 1124678899999988887764
No 204
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.048 Score=36.16 Aligned_cols=79 Identities=10% Similarity=-0.168 Sum_probs=49.1
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc---CCCCEEEEcccCCCCCCC--cCh--HHHH
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV---EGCKGVFCVATPRTLEDP--VGL--EKEL 72 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~---~~~d~V~HlAa~~~~~~~--~~~--~~~~ 72 (91)
++.|+.++.+.+...+... .. .++.++.+|++ .. ..++ ..+|++||.|+....... .++ ....
T Consensus 36 ~~~r~~~~~~~~~~~l~~~---~~----~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~ 108 (259)
T PRK06125 36 LVARDADALEALAADLRAA---HG----VDVAVHALDLSSPEAREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAG 108 (259)
T ss_pred EEeCCHHHHHHHHHHHHhh---cC----CceEEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHH
Confidence 4557766555444433211 11 46788999999 55 3333 458999999987532211 122 1356
Q ss_pred HHHHHHHHHHHHHHHH
Q 042773 73 ALPAVQGTLNVLEAAK 88 (91)
Q Consensus 73 ~~~nv~gt~nlLeaa~ 88 (91)
++.|+.+...+.+++.
T Consensus 109 ~~~n~~~~~~~~~~~~ 124 (259)
T PRK06125 109 WELKVFGYIDLTRLAY 124 (259)
T ss_pred HHHhhHHHHHHHHHHH
Confidence 8899999999988764
No 205
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.063 Score=35.80 Aligned_cols=78 Identities=8% Similarity=-0.054 Sum_probs=45.9
Q ss_pred CeeecCCCCC-hhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc------CCCCEEEEcccCCCCC-C-CcCh
Q 042773 1 MNAAIFPGSD-PSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV------EGCKGVFCVATPRTLE-D-PVGL 68 (91)
Q Consensus 1 ~~~~vr~~~k-~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~------~~~d~V~HlAa~~~~~-~-~~~~ 68 (91)
|.++.|+.++ .+.+.+.... .+ . .+++++.+|++ .. ...+ .++|++||.|+..... . ..++
T Consensus 36 V~~~~r~~~~~~~~~~~~l~~--~~-~----~~v~~~~~D~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~ 108 (253)
T PRK07904 36 VVLAALPDDPRRDAAVAQMKA--AG-A----SSVEVIDFDALDTDSHPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQ 108 (253)
T ss_pred EEEEeCCcchhHHHHHHHHHh--cC-C----CceEEEEecCCChHHHHHHHHHHHhcCCCCEEEEeeecCCchhhcccCH
Confidence 3467788775 4443332221 11 1 37889999998 44 2222 2689999988875431 1 1222
Q ss_pred H--HHHHHHHHHHHHHHHH
Q 042773 69 E--KELALPAVQGTLNVLE 85 (91)
Q Consensus 69 ~--~~~~~~nv~gt~nlLe 85 (91)
. .+.++.|+.|+.++.+
T Consensus 109 ~~~~~~~~vN~~~~~~l~~ 127 (253)
T PRK07904 109 RKAVQIAEINYTAAVSVGV 127 (253)
T ss_pred HHHHHHHHHHhHhHHHHHH
Confidence 1 2468999998887533
No 206
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.022 Score=38.15 Aligned_cols=56 Identities=9% Similarity=-0.029 Sum_probs=38.5
Q ss_pred CeEEEecCcc-cc--ccc-------cCCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFT-------VEGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~-------~~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
...++.+|+. .. ... +.++|+|||.|+...... ..++ +..+++|+.|+.++++++.
T Consensus 51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~ 121 (272)
T PRK07832 51 VPEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQW-RRMVDVNLMGPIHVIETFV 121 (272)
T ss_pred cceEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHH-HHHHHHHhHHHHHHHHHHH
Confidence 3456789998 44 222 235899999998754321 1222 4678999999999999874
No 207
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.74 E-value=0.028 Score=36.88 Aligned_cols=58 Identities=3% Similarity=-0.196 Sum_probs=39.9
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC--cCh--HHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP--VGL--EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~--~~~--~~~~~~~nv~gt~nlLeaa~~ 89 (91)
++.++.+|+. +. ..++ .++|+|||.|+....... .++ .+..++.|+.|+.++++++.+
T Consensus 57 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 128 (252)
T PRK06077 57 EGIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAK 128 (252)
T ss_pred eeEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHH
Confidence 5667889998 44 3332 368999999997543211 121 135688999999999998864
No 208
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.025 Score=37.02 Aligned_cols=57 Identities=5% Similarity=-0.095 Sum_probs=38.6
Q ss_pred CeEEEecCcc-cc--ccccC----CCCEEEEcccCCC---CC---CC----cChHHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTVE----GCKGVFCVATPRT---LE---DP----VGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~~----~~d~V~HlAa~~~---~~---~~----~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
++.++++|+. +. +.+++ .+|.+||.|++.. .+ .. .+. ..+++.|+.|+.++++++..
T Consensus 45 ~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~-~~~~~~N~~~~~~~~~~~~~ 118 (223)
T PRK05884 45 DVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAW-RNALDATVLSAVLTVQSVGD 118 (223)
T ss_pred cCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 4567889999 54 44432 5899999998521 10 11 122 46789999999999998753
No 209
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.035 Score=37.22 Aligned_cols=78 Identities=9% Similarity=-0.132 Sum_probs=47.6
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC------CCCEEEEcccCCCCCC-----CcCh
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE------GCKGVFCVATPRTLED-----PVGL 68 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~------~~d~V~HlAa~~~~~~-----~~~~ 68 (91)
.+.|+.++...+.+.+... .. .++.++.+|++ .. +.+++ ++|.+||.|+...... .++.
T Consensus 37 ~~~r~~~~~~~~~~~~~~~---~~----~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~ 109 (263)
T PRK08339 37 LLSRNEENLKKAREKIKSE---SN----VDVSYIVADLTKREDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDW 109 (263)
T ss_pred EEeCCHHHHHHHHHHHHhh---cC----CceEEEEecCCCHHHHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHH
Confidence 4567766554444433211 01 47889999999 54 33332 5899999998753321 1222
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 042773 69 EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 69 ~~~~~~~nv~gt~nlLeaa~ 88 (91)
...++.|+.+...+.+++.
T Consensus 110 -~~~~~~n~~~~~~~~~~~l 128 (263)
T PRK08339 110 -EGAVKLLLYPAVYLTRALV 128 (263)
T ss_pred -HHHHHHHhHHHHHHHHHHH
Confidence 3678889888777766654
No 210
>PRK07985 oxidoreductase; Provisional
Probab=95.70 E-value=0.032 Score=38.13 Aligned_cols=58 Identities=14% Similarity=0.024 Sum_probs=40.8
Q ss_pred CCeEEEecCcc-cc--ccc-------cCCCCEEEEcccCCCC-CC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFT-------VEGCKGVFCVATPRTL-ED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~-------~~~~d~V~HlAa~~~~-~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ .+ ..+ +.++|++||.|+.... +. ..++ .++++.|+.|+.++++++..
T Consensus 100 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~ 173 (294)
T PRK07985 100 RKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQF-QKTFAINVFALFWLTQEAIP 173 (294)
T ss_pred CeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHH
Confidence 36778899999 54 322 2358999999986421 11 1233 46799999999999998864
No 211
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.70 E-value=0.021 Score=37.49 Aligned_cols=58 Identities=17% Similarity=0.076 Sum_probs=39.5
Q ss_pred CCeEEEecCcc-cc--ccccC-------C-CCEEEEcccCCC---------CCC-CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE-------G-CKGVFCVATPRT---------LED-PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~-------~-~d~V~HlAa~~~---------~~~-~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++++|+. +. ..+++ . +|++||.|+... ... ..+...+.++.|+.++.++++++.
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (253)
T PRK08642 52 DRAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAAL 130 (253)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHH
Confidence 36788999998 44 43332 2 899999997531 100 111124678999999999999985
No 212
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.025 Score=37.45 Aligned_cols=57 Identities=11% Similarity=-0.013 Sum_probs=39.7
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|+. +. ..++ ..+|+|||.|+...... ..+. .++++.|+.|+..+++++.
T Consensus 58 ~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~ 129 (254)
T PRK06114 58 RRAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQW-QTVMDINLTGVFLSCQAEA 129 (254)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHH-HHHHhhcchhhHHHHHHHH
Confidence 46778999998 54 3333 34799999999764321 1222 4678899999988887764
No 213
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=95.67 E-value=0.022 Score=37.14 Aligned_cols=58 Identities=10% Similarity=-0.043 Sum_probs=39.2
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCC-CCcCh----HHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLE-DPVGL----EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~-~~~~~----~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|+. .. ..++ ..+|+|||.|+..... ...++ ...+++.|+.++.++++++.
T Consensus 51 ~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 123 (247)
T PRK09730 51 GKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAV 123 (247)
T ss_pred CeEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 36788999999 54 3333 3468999999975321 11111 23678999999998887664
No 214
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.62 E-value=0.027 Score=39.65 Aligned_cols=83 Identities=18% Similarity=0.137 Sum_probs=54.0
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-Cc-Ch
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-PV-GL 68 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-~~-~~ 68 (91)
|+.+.|+..|...+........ .++.+.|.-+|+. .+ ...+ -.+|.+||+|+..-++. .. .|
T Consensus 60 Vti~ar~~~kl~~a~~~l~l~~------~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~ 133 (331)
T KOG1210|consen 60 VTITARSGKKLLEAKAELELLT------QVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSP 133 (331)
T ss_pred eEEEeccHHHHHHHHhhhhhhh------ccceeeEeccccccHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCH
Confidence 5667889888877766543211 1234678889986 32 2222 23699999999875432 11 22
Q ss_pred H--HHHHHHHHHHHHHHHHHHHH
Q 042773 69 E--KELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 69 ~--~~~~~~nv~gt~nlLeaa~~ 89 (91)
. +..+++|..||.|+..++..
T Consensus 134 ~~v~~~m~vNylgt~~v~~~~~~ 156 (331)
T KOG1210|consen 134 EVVEKLMDVNYLGTVNVAKAAAR 156 (331)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHH
Confidence 1 35789999999999988764
No 215
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.58 E-value=0.04 Score=36.49 Aligned_cols=58 Identities=14% Similarity=0.015 Sum_probs=41.2
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++++|++ .+ ..++ ..+|++||.|+...... ..++ ...++.|+.|+.++++++..
T Consensus 57 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~~~~~ 129 (253)
T PRK08993 57 RRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDW-DDVMNLNIKSVFFMSQAAAK 129 (253)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHH-HHHHhhhhHHHHHHHHHHHH
Confidence 36788999998 44 3333 25899999999754321 1233 46789999999999988753
No 216
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.54 E-value=0.038 Score=37.95 Aligned_cols=57 Identities=11% Similarity=-0.045 Sum_probs=41.2
Q ss_pred CCeEEEecCcc-cc--cccc------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|+. .+ ..++ ..+|+|||.|+...... ..++ ..++++|+.|+.++++++.
T Consensus 62 ~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~-~~~~~vn~~g~~~l~~~~~ 132 (306)
T PRK07792 62 AKAVAVAGDISQRATADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEW-DAVIAVHLRGHFLLTRNAA 132 (306)
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHH-HHHHHHhhhHHHHHHHHHH
Confidence 46788999999 54 3332 35899999999864321 1233 4678999999999999875
No 217
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.53 E-value=0.052 Score=35.31 Aligned_cols=57 Identities=9% Similarity=-0.131 Sum_probs=40.4
Q ss_pred CCeEEEecCcc-c-c--ccccCCCCEEEEcccCCCC--CC----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-N-G--RFTVEGCKGVFCVATPRTL--ED----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~-~--~~~~~~~d~V~HlAa~~~~--~~----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|+. . . .+.+..+|+|||.|+.... +. ..++ .++++.|+.|+.++++++.
T Consensus 45 ~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~ 111 (235)
T PRK06550 45 GNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEW-QHIFDTNLTSTFLLTRAYL 111 (235)
T ss_pred CcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHH
Confidence 36778899998 5 3 3334578999999986421 11 1233 4678999999999999875
No 218
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.53 E-value=0.029 Score=38.75 Aligned_cols=78 Identities=9% Similarity=-0.165 Sum_probs=47.7
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC---CcCh-
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED---PVGL- 68 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~---~~~~- 68 (91)
.+.|+.++...+...+ +... .++.++.+|++ .. +.++ .++|++||.|+...... ..++
T Consensus 33 l~~r~~~~~~~~~~~l----~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~ 104 (314)
T TIGR01289 33 MACRDFLKAEQAAKSL----GMPK----DSYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTAD 104 (314)
T ss_pred EEeCCHHHHHHHHHHh----cCCC----CeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHH
Confidence 4567766554444432 1111 46788899998 44 2222 35899999999743211 1122
Q ss_pred -HHHHHHHHHHHHHHHHHHHH
Q 042773 69 -EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 69 -~~~~~~~nv~gt~nlLeaa~ 88 (91)
.+..+++|+.|+..+.+++.
T Consensus 105 ~~~~~~~vN~~~~~~l~~~~l 125 (314)
T TIGR01289 105 GFELSVGTNHLGHFLLCNLLL 125 (314)
T ss_pred HHHHHHhhhhhHHHHHHHHHH
Confidence 24678999999888876654
No 219
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.50 E-value=0.047 Score=35.83 Aligned_cols=57 Identities=14% Similarity=0.010 Sum_probs=41.0
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-----cChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-----VGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-----~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|++ .. ...+ .++|+|||.|+....... .++ .+.++.|+.++.++++++.
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~ 123 (248)
T TIGR01832 52 RRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDW-DDVMNVNLKSVFFLTQAAA 123 (248)
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHH-HHHHhhhhHHHHHHHHHHH
Confidence 46889999999 54 3222 358999999997643211 222 4678899999999999875
No 220
>PLN00016 RNA-binding protein; Provisional
Probab=95.46 E-value=0.033 Score=39.33 Aligned_cols=44 Identities=14% Similarity=-0.028 Sum_probs=31.1
Q ss_pred CeEEEecCcc-cc-ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 32 RLAYWTPTLF-NG-RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 32 ~~~~v~~Dl~-~~-~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
+++++.+|+. .. .-...++|+|||+++. +..++.+++++|++.|
T Consensus 111 ~v~~v~~D~~d~~~~~~~~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~g 156 (378)
T PLN00016 111 GVKTVWGDPADVKSKVAGAGFDVVYDNNGK----------------DLDEVEPVADWAKSPG 156 (378)
T ss_pred CceEEEecHHHHHhhhccCCccEEEeCCCC----------------CHHHHHHHHHHHHHcC
Confidence 6889999998 33 1123579999998542 1336788999998764
No 221
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.42 E-value=0.042 Score=36.38 Aligned_cols=57 Identities=9% Similarity=-0.127 Sum_probs=36.7
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCC--CC----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTL--ED----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~--~~----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|++ .. ..++ .++|++||.|+.... +. ..+. ...++.|+.++..+++.+.
T Consensus 56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~ 128 (260)
T PRK12823 56 GEALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQI-EAEIRRSLFPTLWCCRAVL 128 (260)
T ss_pred CeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHH-HHHHHHHhHHHHHHHHHHH
Confidence 36778899998 54 3332 358999999985321 11 1222 3567889988887666554
No 222
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.40 E-value=0.02 Score=35.27 Aligned_cols=59 Identities=8% Similarity=-0.084 Sum_probs=42.3
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC-c---ChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP-V---GLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~-~---~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++++|++ .. +..+ ..+|++||.|+....+.. + +...++++.|+.+...+.+++..
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 124 (167)
T PF00106_consen 52 AKITFIECDLSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP 124 (167)
T ss_dssp SEEEEEESETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee
Confidence 58899999999 54 3322 357999999998864332 1 12246788999999999887753
No 223
>PRK08589 short chain dehydrogenase; Validated
Probab=95.27 E-value=0.081 Score=35.51 Aligned_cols=58 Identities=7% Similarity=-0.045 Sum_probs=38.7
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCC-C-CcCh---HHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLE-D-PVGL---EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~-~-~~~~---~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|++ .. ..++ ..+|++||.|+..... . ...+ ...+++.|+.|+..+++++.
T Consensus 54 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 126 (272)
T PRK08589 54 GKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLL 126 (272)
T ss_pred CeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 36888999999 54 3322 3579999999976321 1 1222 23567889999988777754
No 224
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=95.19 E-value=0.045 Score=36.39 Aligned_cols=58 Identities=12% Similarity=0.080 Sum_probs=40.2
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC--------------CcChHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED--------------PVGLEKELALPAVQGTLNVLEA 86 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~--------------~~~~~~~~~~~nv~gt~nlLea 86 (91)
.++.++.+|++ +. ..++ ..+|+|||.|+...... .++. +.+++.|+.|+..++++
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~ 127 (266)
T PRK06171 49 ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAF-DKMFNINQKGVFLMSQA 127 (266)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHH-HHHHhhhchhHHHHHHH
Confidence 36778999999 54 3332 35799999999643210 1122 35788999999999988
Q ss_pred HHH
Q 042773 87 AKR 89 (91)
Q Consensus 87 a~~ 89 (91)
+..
T Consensus 128 ~~~ 130 (266)
T PRK06171 128 VAR 130 (266)
T ss_pred HHH
Confidence 863
No 225
>PRK06484 short chain dehydrogenase; Validated
Probab=95.18 E-value=0.032 Score=40.79 Aligned_cols=75 Identities=8% Similarity=-0.052 Sum_probs=48.1
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCC-CC-----Cc
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTL-ED-----PV 66 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~-~~-----~~ 66 (91)
.+.|++++.+.+.+.. . .++.++.+|++ +. ..++ ..+|++||.|+.... .. ..
T Consensus 298 ~~~r~~~~~~~~~~~~----~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~ 366 (520)
T PRK06484 298 IIDRDAEGAKKLAEAL----G-------DEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAE 366 (520)
T ss_pred EEeCCHHHHHHHHHHh----C-------CceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHH
Confidence 4556655544444432 1 35667889999 54 3333 347999999997532 11 12
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHH
Q 042773 67 GLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 67 ~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
+. +.++++|+.|+.++++++..
T Consensus 367 ~~-~~~~~~n~~~~~~~~~~~~~ 388 (520)
T PRK06484 367 DF-TRVYDVNLSGAFACARAAAR 388 (520)
T ss_pred HH-HHHHHhCcHHHHHHHHHHHH
Confidence 22 46789999999999988764
No 226
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=95.12 E-value=0.1 Score=33.97 Aligned_cols=59 Identities=2% Similarity=-0.117 Sum_probs=40.5
Q ss_pred CCeEEEecCcc-cc--cc---ccCCCCEEEEcccCCCCC------CC--cCh--HHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RF---TVEGCKGVFCVATPRTLE------DP--VGL--EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~---~~~~~d~V~HlAa~~~~~------~~--~~~--~~~~~~~nv~gt~nlLeaa~~ 89 (91)
+++.++++|+. .. +. .+.++|+|||.|+..... .. .++ ....+..|+.++..+++.+..
T Consensus 43 ~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~ 117 (235)
T PRK09009 43 DNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTP 117 (235)
T ss_pred CceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 47889999999 54 33 345789999999986421 11 111 235688899999988887653
No 227
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.061 Score=34.89 Aligned_cols=54 Identities=11% Similarity=0.016 Sum_probs=37.3
Q ss_pred EEEecCcc-cc--ccccC------CCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 34 AYWTPTLF-NG--RFTVE------GCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 34 ~~v~~Dl~-~~--~~~~~------~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
+++.+|+. .. ..+++ ++|+|||+|+...... ..++ ...++.|+.|+.++++++.
T Consensus 44 ~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~ 111 (234)
T PRK07577 44 ELFACDLADIEQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAAL-QDVYDLNVRAAVQVTQAFL 111 (234)
T ss_pred eEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHH-HHHHHHHhHHHHHHHHHHH
Confidence 57889998 54 33333 6899999999865421 1233 3578899999988877764
No 228
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.07 E-value=0.086 Score=34.86 Aligned_cols=57 Identities=7% Similarity=-0.016 Sum_probs=38.6
Q ss_pred CCeEEEecCcc-cc--ccc-------cCCCCEEEEcccCCCCC--C-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFT-------VEGCKGVFCVATPRTLE--D-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~-------~~~~d~V~HlAa~~~~~--~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++++|+. .+ ..+ +..+|+|||.|+..... . ..++ ...++.|+.|+.++++++.
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~ 122 (260)
T PRK06523 49 EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEW-QDELNLNLLAAVRLDRALL 122 (260)
T ss_pred CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHH-HHHHhHhhHHHHHHHHHHH
Confidence 36788999999 54 322 23589999999854211 1 1233 4678899999988877654
No 229
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=95.05 E-value=0.032 Score=37.05 Aligned_cols=80 Identities=6% Similarity=-0.180 Sum_probs=46.5
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccC-----------CCCEEEEcccCCCC-CC-C-
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVE-----------GCKGVFCVATPRTL-ED-P- 65 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~-----------~~d~V~HlAa~~~~-~~-~- 65 (91)
.+.|++++...+...+... ... .++.++.+|+. .. ..+++ +.+++||.|+.... .. .
T Consensus 33 ~~~r~~~~~~~~~~~l~~~--~~~----~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~ 106 (256)
T TIGR01500 33 LSARNDEALRQLKAEIGAE--RSG----LRVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFV 106 (256)
T ss_pred EEEcCHHHHHHHHHHHHhc--CCC----ceEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccc
Confidence 3557766555444433211 011 36788999999 54 33321 12589999986432 11 1
Q ss_pred --cCh--HHHHHHHHHHHHHHHHHHHH
Q 042773 66 --VGL--EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 66 --~~~--~~~~~~~nv~gt~nlLeaa~ 88 (91)
.+. ...+++.|+.|+..+.+++.
T Consensus 107 ~~~~~~~~~~~~~vN~~~~~~~~~~~~ 133 (256)
T TIGR01500 107 DLSDSTQVQNYWALNLTSMLCLTSSVL 133 (256)
T ss_pred cCCCHHHHHHHHHhhhHHHHHHHHHHH
Confidence 121 24688999999988877664
No 230
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.03 E-value=0.037 Score=36.05 Aligned_cols=80 Identities=9% Similarity=0.029 Sum_probs=49.3
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCCcCh--
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDPVGL-- 68 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~~~~-- 68 (91)
|.++.|+.++.+.+.... .. . .++.++.+|+. +. ..++ .++|.+||.++........++
T Consensus 32 V~~~~r~~~~~~~~~~~~----~~-~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~ 102 (238)
T PRK05786 32 VCINSRNENKLKRMKKTL----SK-Y----GNIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSG 102 (238)
T ss_pred EEEEeCCHHHHHHHHHHH----Hh-c----CCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHH
Confidence 456777776655443322 11 1 36888999999 54 3332 347999999986532211121
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 042773 69 EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 69 ~~~~~~~nv~gt~nlLeaa~~ 89 (91)
....++.|+.+...+++.+..
T Consensus 103 ~~~~~~~n~~~~~~~~~~~~~ 123 (238)
T PRK05786 103 LEEMLTNHIKIPLYAVNASLR 123 (238)
T ss_pred HHHHHHHhchHHHHHHHHHHH
Confidence 135678899998888887653
No 231
>PRK07578 short chain dehydrogenase; Provisional
Probab=95.00 E-value=0.07 Score=34.03 Aligned_cols=54 Identities=9% Similarity=0.014 Sum_probs=37.5
Q ss_pred EEecCcc-cc--cccc---CCCCEEEEcccCCCCCCC-----cChHHHHHHHHHHHHHHHHHHHHH
Q 042773 35 YWTPTLF-NG--RFTV---EGCKGVFCVATPRTLEDP-----VGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 35 ~v~~Dl~-~~--~~~~---~~~d~V~HlAa~~~~~~~-----~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
++.+|+. .+ ...+ .++|+|||.|+....... ++. .+.++.|+.|+.++++++..
T Consensus 35 ~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 99 (199)
T PRK07578 35 DVQVDITDPASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDF-NVGLQSKLMGQVNLVLIGQH 99 (199)
T ss_pred ceEecCCChHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 4678998 54 4433 368999999987543211 222 35688999999999998764
No 232
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=94.90 E-value=0.087 Score=40.37 Aligned_cols=57 Identities=14% Similarity=-0.120 Sum_probs=37.5
Q ss_pred CeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCCC-cCh---HHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLEDP-VGL---EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~~-~~~---~~~~~~~nv~gt~nlLeaa~ 88 (91)
++.++++|++ .. ..+++ ++|+|||.|+....... ..+ ....++.|+.|...+...+.
T Consensus 466 ~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al 536 (676)
T TIGR02632 466 RAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAF 536 (676)
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678899999 54 44443 68999999997643221 111 13567888888877765543
No 233
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.87 E-value=0.083 Score=34.93 Aligned_cols=55 Identities=5% Similarity=-0.130 Sum_probs=36.5
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAA 87 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa 87 (91)
++.++.+|++ +. ..++ ..+|+|||.|+...... ..++ ..+++.|+.|+..+..++
T Consensus 52 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~ 121 (255)
T PRK06463 52 GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKY-NKMIKINLNGAIYTTYEF 121 (255)
T ss_pred CCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHH-HHHHhHhhHHHHHHHHHH
Confidence 4678899999 54 3333 35899999998753211 1222 367889999976665544
No 234
>PRK06483 dihydromonapterin reductase; Provisional
Probab=94.85 E-value=0.12 Score=33.74 Aligned_cols=58 Identities=12% Similarity=0.086 Sum_probs=37.9
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC----cChHHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP----VGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~----~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
++.++.+|+. .+ ...+ ..+|++||.|+....... .+.....++.|+.++..+.+++..
T Consensus 47 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~ 118 (236)
T PRK06483 47 GAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALED 118 (236)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHH
Confidence 4568889998 44 2222 348999999987532211 112246788999999887776653
No 235
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.85 E-value=0.051 Score=36.08 Aligned_cols=58 Identities=10% Similarity=0.031 Sum_probs=40.9
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ .. ..++ ..+|++||.|+...... ..++ ..+++.|+.|+..+.+++..
T Consensus 55 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~-~~~~~vN~~~~~~l~~~~~~ 127 (251)
T PRK12481 55 RKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDW-DDVININQKTVFFLSQAVAK 127 (251)
T ss_pred CeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHH-HHHheeCcHHHHHHHHHHHH
Confidence 46888999999 54 3333 35899999999764321 1233 46788999999998887753
No 236
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.70 E-value=0.12 Score=36.42 Aligned_cols=45 Identities=16% Similarity=0.006 Sum_probs=34.2
Q ss_pred ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 44 RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 44 ~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.+.++++|+|||+|+....+ ..+. .+.++.|+.-...+.+...++
T Consensus 73 ~~~l~~aDiVI~tAG~~~~~-~~~R-~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 73 EEAFKDVDVAILVGAMPRKE-GMER-KDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred HHHhCCCCEEEEeCCcCCCC-CCCH-HHHHHHHHHHHHHHHHHHHHh
Confidence 46789999999999987542 2444 478999999888887766553
No 237
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.57 E-value=0.13 Score=33.61 Aligned_cols=56 Identities=5% Similarity=-0.166 Sum_probs=38.3
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
++.++.+|+. .. ..++ .++|+|||.|+...... ..++ ..+++.|+.++.++++++.
T Consensus 54 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~ 124 (246)
T PRK12938 54 DFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDW-TAVIDTNLTSLFNVTKQVI 124 (246)
T ss_pred cEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHHH
Confidence 5677889998 44 3332 36899999999764211 1233 4678999999888777654
No 238
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.56 E-value=0.14 Score=33.74 Aligned_cols=58 Identities=5% Similarity=-0.229 Sum_probs=38.1
Q ss_pred CeEEEecCcc-cc--cc----cc---------CCCCEEEEcccCCCCCCCc--Ch--HHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RF----TV---------EGCKGVFCVATPRTLEDPV--GL--EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~----~~---------~~~d~V~HlAa~~~~~~~~--~~--~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.+.++.+|+. .. .. .. ..+|++||.|+........ ++ ...+++.|+.|+..+++++..
T Consensus 55 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 132 (252)
T PRK12747 55 SAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALS 132 (252)
T ss_pred ceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 5667788988 43 21 11 1589999999975332111 11 245778999999999988754
No 239
>PRK06484 short chain dehydrogenase; Validated
Probab=94.45 E-value=0.094 Score=38.33 Aligned_cols=57 Identities=14% Similarity=-0.017 Sum_probs=39.8
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCC---C--C--CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTL---E--D--PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~---~--~--~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
++.++.+|++ +. ..++ ..+|++||.|+.... + . ..++ ..+++.|+.|+..+++++..
T Consensus 52 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 125 (520)
T PRK06484 52 DHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEF-ARLQAINLTGAYLVAREALR 125 (520)
T ss_pred ceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHH-HHHHHHhhHHHHHHHHHHHH
Confidence 5678899999 54 3333 358999999987321 1 1 1233 46889999999999988764
No 240
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.39 E-value=0.1 Score=37.59 Aligned_cols=56 Identities=11% Similarity=-0.070 Sum_probs=39.1
Q ss_pred eEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 33 LAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 33 ~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
..++.+|++ .. ..++ .++|+|||.|+...... ..+. ..++++|+.|+.++++++..
T Consensus 258 ~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~-~~~~~~n~~g~~~l~~~~~~ 328 (450)
T PRK08261 258 GTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARW-DSVLAVNLLAPLRITEALLA 328 (450)
T ss_pred CeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHH
Confidence 357788998 44 3322 25899999999764321 1222 46788999999999998864
No 241
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.12 E-value=0.17 Score=35.09 Aligned_cols=56 Identities=11% Similarity=-0.015 Sum_probs=41.5
Q ss_pred CeEEEecCcc-cc--cc-------ccCCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RF-------TVEGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~-------~~~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
++.++++|++ .. .. .+.++|+.++=||...... ..+. ..++++|+.|+..+..++.
T Consensus 64 ~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~-~~~mdtN~~G~V~~Tk~al 134 (282)
T KOG1205|consen 64 KVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDV-RNVMDTNVFGTVYLTKAAL 134 (282)
T ss_pred ccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHH-HHHhhhhchhhHHHHHHHH
Confidence 5888999999 44 32 3457999999999876321 1222 3588999999999988875
No 242
>PRK07023 short chain dehydrogenase; Provisional
Probab=94.12 E-value=0.047 Score=35.83 Aligned_cols=59 Identities=14% Similarity=-0.091 Sum_probs=38.8
Q ss_pred CCeEEEecCcc-cc--cccc-----------CCCCEEEEcccCCCCC-C--CcCh--HHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-----------EGCKGVFCVATPRTLE-D--PVGL--EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-----------~~~d~V~HlAa~~~~~-~--~~~~--~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|+. .. ...+ ...|.+||.|+..... . ..++ ..+.++.|+.|+..+++.+.+
T Consensus 45 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 122 (243)
T PRK07023 45 ERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQ 122 (243)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHH
Confidence 47888999999 54 3321 1468999999875421 1 1111 246788899998887776653
No 243
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=94.10 E-value=0.086 Score=34.35 Aligned_cols=56 Identities=13% Similarity=0.023 Sum_probs=40.0
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAA 87 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa 87 (91)
.++.++.+|+. .. ..++ ..+|++||.|+...... ..++ ..+++.|+.|+.++++++
T Consensus 48 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~ 118 (239)
T TIGR01831 48 GNARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDW-DIVIHTNLDGFYNVIHPC 118 (239)
T ss_pred CeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHH-HHHHHHHhHHHHHHHHHH
Confidence 47889999999 54 3332 24699999998653211 2333 468999999999999876
No 244
>PRK12742 oxidoreductase; Provisional
Probab=93.87 E-value=0.19 Score=32.66 Aligned_cols=57 Identities=11% Similarity=-0.051 Sum_probs=38.5
Q ss_pred CeEEEecCcc-cc--cccc---CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV---EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~---~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
+..++.+|+. .. .+.+ ..+|++||.|+...... ..++ ...++.|+.|+.+++..+..
T Consensus 52 ~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~ 119 (237)
T PRK12742 52 GATAVQTDSADRDAVIDVVRKSGALDILVVNAGIAVFGDALELDADDI-DRLFKINIHAPYHASVEAAR 119 (237)
T ss_pred CCeEEecCCCCHHHHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHH-HHHHhHHHHHHHHHHHHHHH
Confidence 3567788998 44 3333 34899999998764321 1233 46889999999999766553
No 245
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=93.86 E-value=0.21 Score=33.06 Aligned_cols=56 Identities=5% Similarity=-0.117 Sum_probs=36.9
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-C----cChHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-P----VGLEKELALPAVQGTLNVLEAA 87 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-~----~~~~~~~~~~nv~gt~nlLeaa 87 (91)
.++.++.+|++ .. ...+ ..+|++||.|+...... . .++ ...++.|+.++..+++++
T Consensus 57 ~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~~~~~~ 127 (261)
T PRK08936 57 GEAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDW-NKVINTNLTGAFLGSREA 127 (261)
T ss_pred CeEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHH
Confidence 36778899999 54 3333 25799999999764321 1 222 356889988887665544
No 246
>PLN02780 ketoreductase/ oxidoreductase
Probab=93.64 E-value=0.24 Score=34.42 Aligned_cols=81 Identities=14% Similarity=-0.072 Sum_probs=47.5
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc-------ccccC--CCCEEEEcccCCCC--CCC--cC
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG-------RFTVE--GCKGVFCVATPRTL--EDP--VG 67 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~-------~~~~~--~~d~V~HlAa~~~~--~~~--~~ 67 (91)
-.+.|++++.+.+.+.+....+ . .++.++.+|+. +. .+.+. ++|++||.|+.... ... .+
T Consensus 81 il~~R~~~~l~~~~~~l~~~~~--~----~~~~~~~~Dl~~~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~ 154 (320)
T PLN02780 81 VLVARNPDKLKDVSDSIQSKYS--K----TQIKTVVVDFSGDIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVD 154 (320)
T ss_pred EEEECCHHHHHHHHHHHHHHCC--C----cEEEEEEEECCCCcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCC
Confidence 3467887766555443321101 1 25667778886 32 12223 35699999987532 111 11
Q ss_pred h--HHHHHHHHHHHHHHHHHHHH
Q 042773 68 L--EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 68 ~--~~~~~~~nv~gt~nlLeaa~ 88 (91)
+ ...++++|+.|+.++++++.
T Consensus 155 ~~~~~~~~~vN~~g~~~l~~~~l 177 (320)
T PLN02780 155 EELLKNLIKVNVEGTTKVTQAVL 177 (320)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHH
Confidence 1 13578999999999998874
No 247
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=93.57 E-value=0.077 Score=38.62 Aligned_cols=79 Identities=18% Similarity=0.094 Sum_probs=42.7
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc--cc--cccc----CCCCEEEEcccCCCCCCCcChHHHH
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF--NG--RFTV----EGCKGVFCVATPRTLEDPVGLEKEL 72 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~--~~--~~~~----~~~d~V~HlAa~~~~~~~~~~~~~~ 72 (91)
||+.||+.+++..+...+ ... ....-++.+.. .+ .... .+..+++-.++-.+- .+|- ..-
T Consensus 106 vra~VRd~~~a~~~~~~~-----~~d----~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v~~~~ggrp~--~ed~-~~p 173 (411)
T KOG1203|consen 106 VRALVRDEQKAEDLLGVF-----FVD----LGLQNVEADVVTAIDILKKLVEAVPKGVVIVIKGAGGRPE--EEDI-VTP 173 (411)
T ss_pred eeeeccChhhhhhhhccc-----ccc----cccceeeeccccccchhhhhhhhccccceeEEecccCCCC--cccC-CCc
Confidence 799999999888777632 111 34445554444 22 1111 223344443333221 1110 011
Q ss_pred HHHHHHHHHHHHHHHHHcC
Q 042773 73 ALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 73 ~~~nv~gt~nlLeaa~~~g 91 (91)
.++..+|+.|+++||+.+|
T Consensus 174 ~~VD~~g~knlvdA~~~aG 192 (411)
T KOG1203|consen 174 EKVDYEGTKNLVDACKKAG 192 (411)
T ss_pred ceecHHHHHHHHHHHHHhC
Confidence 3467889999999998765
No 248
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=93.54 E-value=0.042 Score=37.56 Aligned_cols=54 Identities=20% Similarity=0.030 Sum_probs=40.9
Q ss_pred ecCcc-cc--ccccC--CCCEEEEcccCCCCC--CCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 37 TPTLF-NG--RFTVE--GCKGVFCVATPRTLE--DPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 37 ~~Dl~-~~--~~~~~--~~d~V~HlAa~~~~~--~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
++|++ .+ +..++ ...+|||+|+..+-- +...+ -+++..|+.-..|+|..|.++|
T Consensus 38 d~DLt~~a~t~~lF~~ekPthVIhlAAmVGGlf~N~~yn-ldF~r~Nl~indNVlhsa~e~g 98 (315)
T KOG1431|consen 38 DADLTNLADTRALFESEKPTHVIHLAAMVGGLFHNNTYN-LDFIRKNLQINDNVLHSAHEHG 98 (315)
T ss_pred cccccchHHHHHHHhccCCceeeehHhhhcchhhcCCCc-hHHHhhcceechhHHHHHHHhc
Confidence 47888 44 55554 468999999998532 34555 4899999999999999998875
No 249
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=93.48 E-value=0.13 Score=32.88 Aligned_cols=59 Identities=19% Similarity=0.133 Sum_probs=32.3
Q ss_pred CCeEEEecCcc-cc--ccccC-------CCCEEEEcccCCCCCCC--cCh--HHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE-------GCKGVFCVATPRTLEDP--VGL--EKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~-------~~d~V~HlAa~~~~~~~--~~~--~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.++.+|++ .+ ..+++ .++.|||+|+....... .++ ....+.+-+.|+.+|.++...
T Consensus 53 ~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~ 125 (181)
T PF08659_consen 53 ARVEYVQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN 125 (181)
T ss_dssp -EEEEEE--TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CceeeeccCccCHHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc
Confidence 48899999999 54 44432 46899999998643221 222 235677889999999988753
No 250
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=93.40 E-value=0.4 Score=31.98 Aligned_cols=57 Identities=11% Similarity=-0.056 Sum_probs=38.0
Q ss_pred CeEEEecCcc-cc------ccc-------cCCCCEEEEcccCCCCCCC--cC-------------hHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG------RFT-------VEGCKGVFCVATPRTLEDP--VG-------------LEKELALPAVQGTLN 82 (91)
Q Consensus 32 ~~~~v~~Dl~-~~------~~~-------~~~~d~V~HlAa~~~~~~~--~~-------------~~~~~~~~nv~gt~n 82 (91)
++.++.+|++ .. +.. +.++|+|||.|+....... .+ ...++++.|+.++..
T Consensus 53 ~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~ 132 (267)
T TIGR02685 53 SAVTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYF 132 (267)
T ss_pred ceEEEEccCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHH
Confidence 5667889999 53 111 2368999999986532111 11 123678999999999
Q ss_pred HHHHHH
Q 042773 83 VLEAAK 88 (91)
Q Consensus 83 lLeaa~ 88 (91)
+++++.
T Consensus 133 l~~~~~ 138 (267)
T TIGR02685 133 LIKAFA 138 (267)
T ss_pred HHHHHH
Confidence 998764
No 251
>PRK07791 short chain dehydrogenase; Provisional
Probab=93.32 E-value=0.42 Score=32.42 Aligned_cols=57 Identities=11% Similarity=-0.071 Sum_probs=39.9
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|++ .+ ...+ ..+|++||.|+...... ..++ ..++++|+.|+..+++++.
T Consensus 64 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~ 135 (286)
T PRK07791 64 GEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEW-DAVIAVHLKGHFATLRHAA 135 (286)
T ss_pred CceEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHH-HHHHHHccHHHHHHHHHHH
Confidence 36778899999 44 3222 35799999999754221 1233 4679999999999988764
No 252
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=93.23 E-value=0.33 Score=33.43 Aligned_cols=77 Identities=10% Similarity=-0.092 Sum_probs=51.0
Q ss_pred ecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc----C---CCCEEEEcccCCCCCC----CcChH
Q 042773 4 AIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV----E---GCKGVFCVATPRTLED----PVGLE 69 (91)
Q Consensus 4 ~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~----~---~~d~V~HlAa~~~~~~----~~~~~ 69 (91)
+.|+++|...|...+.. .+ . -.++++.+|++ +. .... . .+|.+|.-||...... ..+..
T Consensus 36 vaR~~~kL~~la~~l~~--~~-~----v~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~ 108 (265)
T COG0300 36 VARREDKLEALAKELED--KT-G----VEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEE 108 (265)
T ss_pred EeCcHHHHHHHHHHHHH--hh-C----ceEEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHH
Confidence 56888887666665432 11 1 35778999999 55 2222 1 5899999999875532 12333
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 042773 70 KELALPAVQGTLNVLEAA 87 (91)
Q Consensus 70 ~~~~~~nv~gt~nlLeaa 87 (91)
.++++.|+.+...+-.+.
T Consensus 109 ~~mi~lN~~a~~~LT~~~ 126 (265)
T COG0300 109 EEMIQLNILALTRLTKAV 126 (265)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 578999999988776554
No 253
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=93.02 E-value=0.31 Score=33.25 Aligned_cols=76 Identities=11% Similarity=-0.136 Sum_probs=52.6
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----Cc
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----PV 66 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~~ 66 (91)
..+.|.+++.++|...+. . ..+.....|++ .. ..++ ..+|.+|+=||...... ..
T Consensus 34 vl~aRR~drL~~la~~~~----~------~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~ 103 (246)
T COG4221 34 VLAARREERLEALADEIG----A------GAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLD 103 (246)
T ss_pred EEEeccHHHHHHHHHhhc----c------CceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHH
Confidence 456788888777777641 1 25677889999 53 3222 35899999999864321 23
Q ss_pred ChHHHHHHHHHHHHHHHHHHHH
Q 042773 67 GLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 67 ~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
++ ..+++.|+.|.+++..+..
T Consensus 104 dw-~~Mid~Ni~G~l~~~~avL 124 (246)
T COG4221 104 DW-DRMIDTNVKGLLNGTRAVL 124 (246)
T ss_pred HH-HHHHHHHHHHHHHHHHHhh
Confidence 44 4789999999999887653
No 254
>PRK05599 hypothetical protein; Provisional
Probab=92.89 E-value=0.58 Score=30.93 Aligned_cols=78 Identities=10% Similarity=-0.088 Sum_probs=45.6
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCC--cCh--
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDP--VGL-- 68 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~--~~~-- 68 (91)
.+.|++++.+.+...+... + . ..+.++.+|++ .+ +.++ ..+|++||.|+....... .+.
T Consensus 28 l~~r~~~~~~~~~~~l~~~--~-~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~ 100 (246)
T PRK05599 28 LAARRPEAAQGLASDLRQR--G-A----TSVHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAH 100 (246)
T ss_pred EEeCCHHHHHHHHHHHHhc--c-C----CceEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHH
Confidence 3457776665554443221 1 1 35788999999 54 3222 358999999987643211 111
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 042773 69 EKELALPAVQGTLNVLEAA 87 (91)
Q Consensus 69 ~~~~~~~nv~gt~nlLeaa 87 (91)
..++++.|+.+..+++.++
T Consensus 101 ~~~~~~~n~~~~~~~~~~~ 119 (246)
T PRK05599 101 AVEIATVDYTAQVSMLTVL 119 (246)
T ss_pred HHHHHHHHHHhHHHHHHHH
Confidence 1245677888887766554
No 255
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=92.53 E-value=0.33 Score=42.53 Aligned_cols=58 Identities=17% Similarity=0.126 Sum_probs=42.1
Q ss_pred CCeEEEecCcc-cc--ccccC------CCCEEEEcccCCCCCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVE------GCKGVFCVATPRTLED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~------~~d~V~HlAa~~~~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
..+.|+.+|++ .. ..++. ++|+|||.|+...... ..+. ..++++|+.|+.++++++..
T Consensus 2094 ~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f-~~v~~~nv~G~~~Ll~al~~ 2165 (2582)
T TIGR02813 2094 ASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEF-NAVYGTKVDGLLSLLAALNA 2165 (2582)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 46889999999 44 33332 4899999999764321 1233 46899999999999998864
No 256
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.50 E-value=0.47 Score=31.60 Aligned_cols=56 Identities=5% Similarity=-0.066 Sum_probs=38.0
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCC----CC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTL----ED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~----~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
...++.+|++ .. ...+ ..+|++||.|+.... .. .++. ...++.|+.|+..+++++.
T Consensus 61 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~-~~~~~vN~~~~~~~~~~~~ 135 (258)
T PRK07533 61 APIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGF-ALAMDVSCHSFIRMARLAE 135 (258)
T ss_pred cceEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHH-HHHHhhhhHHHHHHHHHHH
Confidence 3457889999 54 3222 357999999986531 11 1222 4678999999999988765
No 257
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=91.59 E-value=0.41 Score=31.71 Aligned_cols=56 Identities=16% Similarity=-0.012 Sum_probs=32.8
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCC--CC-c-Ch--HHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLE--DP-V-GL--EKELALPAVQGTLNVLEA 86 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~--~~-~-~~--~~~~~~~nv~gt~nlLea 86 (91)
.++.++.+|++ .+ ..++ .++|++||.|+..... .. . +. ..+.+..|+.++..+...
T Consensus 48 ~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 119 (259)
T PRK08340 48 GEVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTL 119 (259)
T ss_pred CCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHH
Confidence 36778999998 54 3333 3689999999974311 11 1 11 123456677766555443
No 258
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=91.43 E-value=0.73 Score=32.45 Aligned_cols=45 Identities=9% Similarity=-0.065 Sum_probs=35.1
Q ss_pred ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 44 RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 44 ~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.+.++++|+|+|+|+...-+. .+. .+.++.|+.-...+.+..+++
T Consensus 71 ~~~~~~aDiVVitAG~~~~~g-~tR-~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 71 EEAFKDVDVAILVGAFPRKPG-MER-ADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred HHHhCCCCEEEEeCCCCCCcC-CcH-HHHHHHhHHHHHHHHHHHHHh
Confidence 466789999999999865432 344 478999999999988887764
No 259
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.73 E-value=0.58 Score=31.05 Aligned_cols=57 Identities=7% Similarity=-0.068 Sum_probs=38.5
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCC----CC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTL----ED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~----~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
++.++.+|++ +. ..++ ..+|++||.|+.... .. .++. ...++.|+.|...+++++..
T Consensus 56 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~-~~~~~in~~~~~~l~~~~~~ 131 (252)
T PRK06079 56 EDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGY-ALAQDISAYSLIAVAKYARP 131 (252)
T ss_pred ceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHH-HHHhCcccHHHHHHHHHHHH
Confidence 5778999999 54 3322 348999999987531 11 1222 35688899999988887653
No 260
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.45 E-value=1.3 Score=29.90 Aligned_cols=57 Identities=7% Similarity=-0.157 Sum_probs=38.4
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCC----CC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTL----ED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~----~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
...++.+|++ .. +..+ ..+|++||.|+.... .. ..+. ...++.|+.|+..+++++..
T Consensus 61 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~-~~~~~vN~~~~~~l~~~~~~ 136 (272)
T PRK08159 61 AFVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNF-TMTMDISVYSFTAVAQRAEK 136 (272)
T ss_pred CceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHH-HHHHhHHHHHHHHHHHHHHH
Confidence 3456889998 54 3222 358999999987531 11 1222 46788999999999987753
No 261
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.33 E-value=1.5 Score=29.20 Aligned_cols=58 Identities=9% Similarity=-0.133 Sum_probs=37.8
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCC----CC--CcCh--HHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTL----ED--PVGL--EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~----~~--~~~~--~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.++.+|++ +. ..++ ..+|.+||.|+.... .. ..++ ....++.|+.+...+.+++.
T Consensus 59 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 134 (257)
T PRK08594 59 QESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAK 134 (257)
T ss_pred CceEEEecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHH
Confidence 46778999999 54 3222 348999999986431 11 1121 13467889999888877765
No 262
>PRK08862 short chain dehydrogenase; Provisional
Probab=90.22 E-value=1.7 Score=28.56 Aligned_cols=77 Identities=9% Similarity=-0.099 Sum_probs=42.4
Q ss_pred ecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------C-CCCEEEEcccCCCCC-CC-cChH-
Q 042773 4 AIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------E-GCKGVFCVATPRTLE-DP-VGLE- 69 (91)
Q Consensus 4 ~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~-~~d~V~HlAa~~~~~-~~-~~~~- 69 (91)
+.|+.++.+.+.+..... . .++..+.+|+. +. ..++ . .+|++||.|+....+ .. ..+.
T Consensus 35 ~~r~~~~l~~~~~~i~~~----~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~ 106 (227)
T PRK08862 35 CDQDQSALKDTYEQCSAL----T----DNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSE 106 (227)
T ss_pred EcCCHHHHHHHHHHHHhc----C----CCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHH
Confidence 456666554444332211 1 35667888988 54 3222 3 589999999754321 11 2122
Q ss_pred --HHHHHHHHHHHHHHHHHHH
Q 042773 70 --KELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 70 --~~~~~~nv~gt~nlLeaa~ 88 (91)
.+.++.|+.+...++.++.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~ 127 (227)
T PRK08862 107 SFIQQLSSLASTLFTYGQVAA 127 (227)
T ss_pred HHHHHHHHhhHHHHHHHHHHH
Confidence 2356668777777665543
No 263
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=89.89 E-value=0.93 Score=30.87 Aligned_cols=78 Identities=10% Similarity=-0.059 Sum_probs=49.2
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cc-------c--cCCCCEEEEcccCCCC-CCCcCh
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RF-------T--VEGCKGVFCVATPRTL-EDPVGL 68 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~-------~--~~~~d~V~HlAa~~~~-~~~~~~ 68 (91)
.+|.||.+++....++. ...+ +++.+++.|++ +. ++ + ..|++..+.-|+.... .....|
T Consensus 33 iat~r~~e~a~~~l~~k-----~~~d---~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~ 104 (249)
T KOG1611|consen 33 IATARDPEKAATELALK-----SKSD---SRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKP 104 (249)
T ss_pred EEecCChHHhhHHHHHh-----hccC---CceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCC
Confidence 47899999863333331 1111 79999999999 54 22 2 2467899999987643 111111
Q ss_pred ----HHHHHHHHHHHHHHHHHHH
Q 042773 69 ----EKELALPAVQGTLNVLEAA 87 (91)
Q Consensus 69 ----~~~~~~~nv~gt~nlLeaa 87 (91)
.-+.+++|+.|...+.+++
T Consensus 105 ~r~~~~~~~~tN~v~~il~~Q~~ 127 (249)
T KOG1611|consen 105 SRAVLLEQYETNAVGPILLTQAF 127 (249)
T ss_pred cHHHHHHHhhhcchhHHHHHHHH
Confidence 2356888988888776654
No 264
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=89.85 E-value=1.4 Score=29.87 Aligned_cols=54 Identities=4% Similarity=-0.133 Sum_probs=36.8
Q ss_pred EEEecCcc-cc--cccc-------CCCCEEEEcccCCCC----CC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 34 AYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTL----ED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 34 ~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~----~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.+|++ .. ..++ ..+|++||.|+.... .. ..+. ..+++.|+.|...+.+++.
T Consensus 58 ~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~ 130 (274)
T PRK08415 58 YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAF-NIAMEISVYSLIELTRALL 130 (274)
T ss_pred eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHH-HHHhhhhhHHHHHHHHHHH
Confidence 56889999 54 3222 357999999997431 11 1222 4678999999999888765
No 265
>PRK06924 short chain dehydrogenase; Provisional
Probab=89.75 E-value=0.3 Score=32.04 Aligned_cols=57 Identities=9% Similarity=-0.103 Sum_probs=34.6
Q ss_pred CCeEEEecCcc-cc--ccccCC---------C--CEEEEcccCCCCC-CC-----cChHHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTVEG---------C--KGVFCVATPRTLE-DP-----VGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~~~---------~--d~V~HlAa~~~~~-~~-----~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.+++++.+|++ .. ...++. . .++||.|+..... .. .+. ...++.|+.|...+++.+.
T Consensus 48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~ 124 (251)
T PRK06924 48 SNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEEL-ITNVHLNLLAPMILTSTFM 124 (251)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHH-HHHhccceehHHHHHHHHH
Confidence 47889999999 54 333321 1 2789998875321 11 222 3567778888766665543
No 266
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=89.48 E-value=0.21 Score=35.40 Aligned_cols=48 Identities=17% Similarity=0.017 Sum_probs=32.0
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEcccCC
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPR 60 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~ 60 (91)
...||.++.+.+...+ . . .++++++.|+. .. .+.++++|.|++++++.
T Consensus 28 va~r~~~~~~~~~~~~----~--~----~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 28 VADRNPEKAERLAEKL----L--G----DRVEAVQVDVNDPESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp EEESSHHHHHHHHT------T--T----TTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred EEECCHHHHHHHHhhc----c--c----cceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence 4557766655554421 1 1 69999999999 55 77889999999999886
No 267
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=89.31 E-value=1.5 Score=30.87 Aligned_cols=45 Identities=13% Similarity=0.017 Sum_probs=34.2
Q ss_pred ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 44 RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 44 ~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.+.++++|+|+|+|+....+. .+. .+.++.|+.-...+.+...++
T Consensus 70 ~~~~~~aDiVVitAG~~~~~~-~tr-~~ll~~N~~i~k~i~~~i~~~ 114 (324)
T TIGR01758 70 AVAFTDVDVAILVGAFPRKEG-MER-RDLLSKNVKIFKEQGRALDKL 114 (324)
T ss_pred HHHhCCCCEEEEcCCCCCCCC-CcH-HHHHHHHHHHHHHHHHHHHhh
Confidence 356789999999999865422 334 478999999999888877654
No 268
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=88.93 E-value=2.1 Score=28.35 Aligned_cols=57 Identities=12% Similarity=-0.054 Sum_probs=37.6
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC--CcCh--HHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED--PVGL--EKELALPAVQGTLNVLEAA 87 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~--~~~~--~~~~~~~nv~gt~nlLeaa 87 (91)
.++.++.+|+. .. ..++ ..+|+|||.|+...... ..++ .+..++.|+.|...+..++
T Consensus 68 ~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 138 (256)
T PRK12859 68 VKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQF 138 (256)
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 46788999998 54 3332 24799999998753221 1121 2357889999998886554
No 269
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=88.32 E-value=0.51 Score=33.45 Aligned_cols=58 Identities=12% Similarity=0.047 Sum_probs=45.1
Q ss_pred CCCeEEEecCcc-cc--ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 30 CSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 30 ~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
+..+-|+..|+. ++ +.+++...+||+|-+---. ..+. .+.++|+.+...|...|++.|
T Consensus 108 LGQvl~~~fd~~DedSIr~vvk~sNVVINLIGrd~e--Tknf--~f~Dvn~~~aerlAricke~G 168 (391)
T KOG2865|consen 108 LGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGRDYE--TKNF--SFEDVNVHIAERLARICKEAG 168 (391)
T ss_pred ccceeeeccCCCCHHHHHHHHHhCcEEEEeeccccc--cCCc--ccccccchHHHHHHHHHHhhC
Confidence 457778889999 55 8888889999999765321 1232 467899999999999999876
No 270
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=88.29 E-value=1.9 Score=28.65 Aligned_cols=57 Identities=9% Similarity=-0.100 Sum_probs=37.8
Q ss_pred CeEEEecCcc-cc--ccc-------cCCCCEEEEcccCCCC-----CCC-cCh--HHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFT-------VEGCKGVFCVATPRTL-----EDP-VGL--EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~-------~~~~d~V~HlAa~~~~-----~~~-~~~--~~~~~~~nv~gt~nlLeaa~ 88 (91)
++.++.+|++ .. +.. +..+|++||.|+.... +.. .++ ....++.|+.|+..+..++.
T Consensus 58 ~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~ 132 (256)
T PRK07889 58 PAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALL 132 (256)
T ss_pred CCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 5668899999 54 322 2358999999987531 111 122 13468899999998887764
No 271
>PRK08303 short chain dehydrogenase; Provisional
Probab=88.06 E-value=3.3 Score=28.56 Aligned_cols=56 Identities=11% Similarity=-0.209 Sum_probs=36.3
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcc-cCCC-----CCC----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVA-TPRT-----LED----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlA-a~~~-----~~~----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
++.++++|++ .. +.++ ..+|++||.| +... .+. ..+. .+.++.|+.++..+..++.
T Consensus 68 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~l 143 (305)
T PRK08303 68 RGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKG-LRMLRLAIDTHLITSHFAL 143 (305)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHH-HHHHHHhhHHHHHHHHHHH
Confidence 5678899999 54 3222 3589999999 6321 111 1122 3567889999988877765
No 272
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=87.44 E-value=2.2 Score=28.49 Aligned_cols=56 Identities=9% Similarity=-0.070 Sum_probs=35.5
Q ss_pred eEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCC-----CCc--Ch--HHHHHHHHHHHHHHHHHHHH
Q 042773 33 LAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLE-----DPV--GL--EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 33 ~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~-----~~~--~~--~~~~~~~nv~gt~nlLeaa~ 88 (91)
...+++|++ .+ ...+ ..+|++||.|+..... ... ++ ....++.|+.+...+.+++.
T Consensus 58 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~ 132 (261)
T PRK08690 58 ELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAAR 132 (261)
T ss_pred ceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHH
Confidence 346889999 54 3332 3589999999976421 111 11 13456788989888877654
No 273
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=87.09 E-value=0.095 Score=36.10 Aligned_cols=57 Identities=11% Similarity=0.092 Sum_probs=38.8
Q ss_pred EEEecCcc--cc-cccc--CCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 34 AYWTPTLF--NG-RFTV--EGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 34 ~~v~~Dl~--~~-~~~~--~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
-|+-.|+. .. ++.+ +.+|-.||..+..+.-...+-+ -..++|+.|..|+|+.|++++
T Consensus 90 PyIy~DILD~K~L~eIVVn~RIdWL~HfSALLSAvGE~NVp-LA~~VNI~GvHNil~vAa~~k 151 (366)
T KOG2774|consen 90 PYIYLDILDQKSLEEIVVNKRIDWLVHFSALLSAVGETNVP-LALQVNIRGVHNILQVAAKHK 151 (366)
T ss_pred CchhhhhhccccHHHhhcccccceeeeHHHHHHHhcccCCc-eeeeecchhhhHHHHHHHHcC
Confidence 36667777 34 4444 3479999998776431222222 457889999999999999864
No 274
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=86.53 E-value=2.4 Score=29.78 Aligned_cols=79 Identities=8% Similarity=-0.232 Sum_probs=52.3
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccc-------cCCCCEEEEcccCCCCCC--CcChHH
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFT-------VEGCKGVFCVATPRTLED--PVGLEK 70 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~-------~~~~d~V~HlAa~~~~~~--~~~~~~ 70 (91)
-+.||.++.+.+.+..+. +... .++.++++|+. .. +.. ....|+.|+=||....+. ..|-.+
T Consensus 64 ~~~R~~~~~~~~~~~i~~--~~~~----~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E 137 (314)
T KOG1208|consen 64 LACRNEERGEEAKEQIQK--GKAN----QKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLE 137 (314)
T ss_pred EEeCCHHHHHHHHHHHHh--cCCC----CceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchh
Confidence 467888777666665432 1222 57888999999 43 221 235699999999876543 234445
Q ss_pred HHHHHHHHHHHHHHHHH
Q 042773 71 ELALPAVQGTLNVLEAA 87 (91)
Q Consensus 71 ~~~~~nv~gt~nlLeaa 87 (91)
..+.+|..|...|.+..
T Consensus 138 ~~~~tN~lg~flLt~lL 154 (314)
T KOG1208|consen 138 LTFATNYLGHFLLTELL 154 (314)
T ss_pred heehhhhHHHHHHHHHH
Confidence 77999999988776654
No 275
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=86.52 E-value=2.6 Score=27.98 Aligned_cols=44 Identities=11% Similarity=0.095 Sum_probs=32.1
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEcccCC
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPR 60 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~ 60 (91)
|-|.|||.+|...+ +++++.+.|+. +. ...+.|.|.||..-+..
T Consensus 27 VTAivRn~~K~~~~----------------~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 27 VTAIVRNASKLAAR----------------QGVTILQKDIFDLTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred eEEEEeChHhcccc----------------ccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence 45788888874211 46778889999 55 57889999999876554
No 276
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=85.46 E-value=2.5 Score=28.16 Aligned_cols=55 Identities=9% Similarity=-0.056 Sum_probs=36.9
Q ss_pred EEEecCcc-cc--cccc-------CCCCEEEEcccCCCCC-----C-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 34 AYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLE-----D-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 34 ~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~-----~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++.+|++ ++ ..++ ..+|++||.|+..... . .++. ...++.|+.|...+.+++..
T Consensus 59 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~-~~~~~iN~~~~~~l~~~~lp 133 (260)
T PRK06997 59 LVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENF-RIAHDISAYSFPALAKAALP 133 (260)
T ss_pred ceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHH-HHHHHhhhHHHHHHHHHHHH
Confidence 36789998 54 3333 3589999999875321 0 1122 35788999999999887753
No 277
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=85.34 E-value=2.6 Score=28.34 Aligned_cols=54 Identities=4% Similarity=-0.195 Sum_probs=36.5
Q ss_pred EEEecCcc-cc--cccc-------CCCCEEEEcccCCCC-----CC----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 34 AYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTL-----ED----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 34 ~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~-----~~----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
.++.+|++ .. +..+ ..+|.+||.|+.... +. .++. ...++.|+.|+.++++++.
T Consensus 60 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~-~~~~~vn~~~~~~l~~~~~ 132 (271)
T PRK06505 60 FVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENF-SRTMVISCFSFTEIAKRAA 132 (271)
T ss_pred eEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHH-HHHHhhhhhhHHHHHHHHH
Confidence 46889999 54 3222 358999999986531 11 1222 3678899999999888765
No 278
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=85.23 E-value=0.63 Score=30.71 Aligned_cols=46 Identities=15% Similarity=0.088 Sum_probs=36.3
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEcccCCC
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRT 61 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~ 61 (91)
||+.+|+.++...+. ..++++.+|+. .. ...++|++.++++.+...
T Consensus 27 v~~~~r~~~~~~~~~---------------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~ 75 (275)
T COG0702 27 VRAAVRNPEAAAALA---------------GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD 75 (275)
T ss_pred EEEEEeCHHHHHhhc---------------CCcEEEEeccCCHhHHHHHhccccEEEEEecccc
Confidence 688899988765444 27789999999 55 777899999999988664
No 279
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=83.36 E-value=3.8 Score=28.74 Aligned_cols=41 Identities=17% Similarity=0.138 Sum_probs=30.9
Q ss_pred CCCEEEEcccCCCCC--CCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 49 GCKGVFCVATPRTLE--DPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 49 ~~d~V~HlAa~~~~~--~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
++|+||+||+..-.. +.....+.+.+.=+..|..|.++..+
T Consensus 56 ~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~ 98 (297)
T COG1090 56 GIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAA 98 (297)
T ss_pred CCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 799999999976432 22233357888889999999998764
No 280
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=82.96 E-value=2.2 Score=28.39 Aligned_cols=57 Identities=9% Similarity=-0.139 Sum_probs=37.8
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCC----CCC--cCh--HHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTL----EDP--VGL--EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~----~~~--~~~--~~~~~~~nv~gt~nlLeaa~ 88 (91)
...++.+|++ .. ...+ ..+|.+||.|+.... ... .++ .+..++.|+.|+..+++++.
T Consensus 60 ~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~ 134 (258)
T PRK07370 60 PSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAK 134 (258)
T ss_pred cceEeecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHH
Confidence 4567889998 54 3222 358999999996531 111 111 24678889999999888765
No 281
>cd02905 Macro_GDAP2_like Macro domain, GDAP2_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. This family contains proteins similar to human GDAP2, the ganglioside induced differentiation associated protein 2, whose gene is expressed at a higher level in differentiated Neuro2a cells compared with non-differentiated cells. GDAP2 contains an N-terminal macro domain and a C-terminal
Probab=82.91 E-value=5.9 Score=24.53 Aligned_cols=39 Identities=18% Similarity=0.090 Sum_probs=22.3
Q ss_pred CCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 49 GCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 49 ~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.+.+|||.++|.......+..++.+. ...+++|+.|.+.
T Consensus 68 ~~k~VIH~vgP~~~~~~~~~~~~~L~---~~~~~~L~~a~~~ 106 (140)
T cd02905 68 PARFIIHTVGPKYNVKYRTAAENALY---SCYRNVLQLAKEL 106 (140)
T ss_pred CccEEEEecCCccCCCCCcHHHHHHH---HHHHHHHHHHHHc
Confidence 47999999998753211121122333 3456667777654
No 282
>PRK05086 malate dehydrogenase; Provisional
Probab=82.16 E-value=6.3 Score=27.57 Aligned_cols=46 Identities=15% Similarity=0.052 Sum_probs=35.8
Q ss_pred ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 44 RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 44 ~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
.+.++++|+||-+++...-+. .+. .+.+..|...+.+++++.++++
T Consensus 64 ~~~l~~~DiVIitaG~~~~~~-~~R-~dll~~N~~i~~~ii~~i~~~~ 109 (312)
T PRK05086 64 TPALEGADVVLISAGVARKPG-MDR-SDLFNVNAGIVKNLVEKVAKTC 109 (312)
T ss_pred HHHcCCCCEEEEcCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHhC
Confidence 356789999999999865432 344 4789999999999999988753
No 283
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=81.80 E-value=2.5 Score=28.24 Aligned_cols=32 Identities=6% Similarity=-0.070 Sum_probs=21.2
Q ss_pred CCeEEEecCcc-c---c-ccccCCCCEEEEcccCCCC
Q 042773 31 SRLAYWTPTLF-N---G-RFTVEGCKGVFCVATPRTL 62 (91)
Q Consensus 31 ~~~~~v~~Dl~-~---~-~~~~~~~d~V~HlAa~~~~ 62 (91)
.+++++..+-. . . .+.++++|+|||.||..+.
T Consensus 58 ~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd~ 94 (229)
T PRK06732 58 PNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSDY 94 (229)
T ss_pred CCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCCc
Confidence 35666654433 2 1 3456789999999998764
No 284
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=81.64 E-value=6.5 Score=26.38 Aligned_cols=57 Identities=7% Similarity=-0.134 Sum_probs=36.0
Q ss_pred CeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC-----C--cCh--HHHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED-----P--VGL--EKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 32 ~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~-----~--~~~--~~~~~~~nv~gt~nlLeaa~ 88 (91)
...++.+|++ .+ +..+ ..+|++||.|+...... . .++ ....++.|+.|...+.+++.
T Consensus 57 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 132 (262)
T PRK07984 57 SDIVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACR 132 (262)
T ss_pred CceEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHH
Confidence 4567889999 54 3322 24799999998643210 1 111 13567889999888877654
No 285
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=81.64 E-value=1.2 Score=32.44 Aligned_cols=48 Identities=8% Similarity=-0.101 Sum_probs=36.8
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-c-c-ccccCCCCEEEEcccCC
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-N-G-RFTVEGCKGVFCVATPR 60 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~-~-~~~~~~~d~V~HlAa~~ 60 (91)
-.+.|+.+|+..+.... . ++++..+.|+. . + .+++++.|.||+++.+.
T Consensus 29 ~iAdRs~~~~~~i~~~~----~-------~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 29 TIADRSKEKCARIAELI----G-------GKVEALQVDAADVDALVALIKDFDLVINAAPPF 79 (389)
T ss_pred EEEeCCHHHHHHHHhhc----c-------ccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence 34667777777666652 1 58999999999 5 4 88889999999998764
No 286
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=80.94 E-value=10 Score=23.32 Aligned_cols=45 Identities=7% Similarity=-0.047 Sum_probs=34.5
Q ss_pred ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 44 RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 44 ~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.+.++++|.|+-+|+....+. .+. .+.++.|..-...+.+...++
T Consensus 64 ~~~~~~aDivvitag~~~~~g-~sR-~~ll~~N~~i~~~~~~~i~~~ 108 (141)
T PF00056_consen 64 YEALKDADIVVITAGVPRKPG-MSR-LDLLEANAKIVKEIAKKIAKY 108 (141)
T ss_dssp GGGGTTESEEEETTSTSSSTT-SSH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccEEEEecccccccc-ccH-HHHHHHhHhHHHHHHHHHHHh
Confidence 356689999999999865432 343 578999999999998887764
No 287
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=80.37 E-value=2.3 Score=29.13 Aligned_cols=48 Identities=8% Similarity=-0.004 Sum_probs=34.3
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLN 82 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~n 82 (91)
..+.|+++|++ .. +..+ ..+|++|+-|+... ..|. +..+.+|+.|..|
T Consensus 55 ~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~~---dkd~-e~Ti~vNLtgvin 112 (261)
T KOG4169|consen 55 VSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGILD---DKDW-ERTINVNLTGVIN 112 (261)
T ss_pred ceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEccccccc---chhH-HHhhccchhhhhh
Confidence 58889999999 44 4433 35799999999975 2455 4778888655444
No 288
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=79.64 E-value=3.8 Score=27.09 Aligned_cols=57 Identities=5% Similarity=-0.053 Sum_probs=35.1
Q ss_pred CCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCC------CC--CcCh--HHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTL------ED--PVGL--EKELALPAVQGTLNVLEAA 87 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~------~~--~~~~--~~~~~~~nv~gt~nlLeaa 87 (91)
.++.++.+|++ ++ ...+ ..+|++||.|+..+. .. ..++ ....++.|+.+...+.+.+
T Consensus 59 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 135 (260)
T PRK08416 59 IKAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEA 135 (260)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 46789999999 54 3322 357999999986421 01 1111 1346777887777665554
No 289
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=78.55 E-value=4.7 Score=26.34 Aligned_cols=54 Identities=9% Similarity=-0.177 Sum_probs=37.2
Q ss_pred EEecCcc-cc--ccc-------c-CCCCEEEEcccCCCC----CCC-----cChHHHHHHHHHHHHHHHHHHHHH
Q 042773 35 YWTPTLF-NG--RFT-------V-EGCKGVFCVATPRTL----EDP-----VGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 35 ~v~~Dl~-~~--~~~-------~-~~~d~V~HlAa~~~~----~~~-----~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
++.+|++ +. +.. + ..+|+++|.|+.... ... ++. ...++.|+.+...+++++..
T Consensus 48 ~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 121 (241)
T PF13561_consen 48 VIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDW-DKTFDINVFSPFLLAQAALP 121 (241)
T ss_dssp EEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHH-HHHHHHHTHHHHHHHHHHHH
T ss_pred eEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 6999998 44 222 3 468999999988754 111 122 35788899999999888753
No 290
>PRK09620 hypothetical protein; Provisional
Probab=77.33 E-value=1.4 Score=29.55 Aligned_cols=19 Identities=11% Similarity=0.113 Sum_probs=14.7
Q ss_pred ccccC--CCCEEEEcccCCCC
Q 042773 44 RFTVE--GCKGVFCVATPRTL 62 (91)
Q Consensus 44 ~~~~~--~~d~V~HlAa~~~~ 62 (91)
.+.+. ++|+|||+||..+.
T Consensus 80 ~~~~~~~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 80 KSIITHEKVDAVIMAAAGSDW 100 (229)
T ss_pred HHHhcccCCCEEEECccccce
Confidence 44553 68999999999765
No 291
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=76.40 E-value=10 Score=25.25 Aligned_cols=53 Identities=4% Similarity=-0.173 Sum_probs=35.4
Q ss_pred EEecCcc-cc--cccc-------CCCCEEEEcccCCCC----CC-----CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 35 YWTPTLF-NG--RFTV-------EGCKGVFCVATPRTL----ED-----PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 35 ~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~----~~-----~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
++++|++ +. ..++ ..+|++||-|+.... .. ..+. ...++.|+.|...+++++.
T Consensus 62 ~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~-~~~~~vn~~~~~~~~~~~~ 133 (260)
T PRK06603 62 VSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENF-HNSLHISCYSLLELSRSAE 133 (260)
T ss_pred EEEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 5789999 54 3322 348999999886421 01 1222 3678899999999888764
No 292
>PRK06720 hypothetical protein; Provisional
Probab=70.39 E-value=17 Score=23.00 Aligned_cols=32 Identities=9% Similarity=0.037 Sum_probs=22.3
Q ss_pred CCeEEEecCcc-cc--ccc-------cCCCCEEEEcccCCCC
Q 042773 31 SRLAYWTPTLF-NG--RFT-------VEGCKGVFCVATPRTL 62 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~-------~~~~d~V~HlAa~~~~ 62 (91)
..+.++.+|++ .. ... +..+|++||.|+....
T Consensus 65 ~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~~ 106 (169)
T PRK06720 65 GEALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLYKI 106 (169)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence 35667889998 44 332 2358999999997653
No 293
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=68.94 E-value=19 Score=25.65 Aligned_cols=56 Identities=16% Similarity=0.079 Sum_probs=39.3
Q ss_pred CCeEEEecCcc-cc--cccc---------CCCCEEEEcccCCCCC----C--CcChHHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-NG--RFTV---------EGCKGVFCVATPRTLE----D--PVGLEKELALPAVQGTLNVLEAA 87 (91)
Q Consensus 31 ~~~~~v~~Dl~-~~--~~~~---------~~~d~V~HlAa~~~~~----~--~~~~~~~~~~~nv~gt~nlLeaa 87 (91)
+++..++.|++ ++ +++. .|.=+|+|-||..... + .++. +..+++|+.|+..+..+.
T Consensus 76 ~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~-~~~l~vNllG~irvT~~~ 149 (322)
T KOG1610|consen 76 PRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDY-RKVLNVNLLGTIRVTKAF 149 (322)
T ss_pred CcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHH-HHHHhhhhhhHHHHHHHH
Confidence 78888999999 65 3332 1456899999865331 1 2454 478999999998876654
No 294
>cd02906 Macro_1 Macro domain, Unknown family 1. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. This family is composed of uncharacterized proteins containing a macro domain, either as a stand-alone domain or in addition to a C-terminal SIR2 (silent information regulator 2) domain.
Probab=67.87 E-value=25 Score=21.80 Aligned_cols=38 Identities=18% Similarity=0.090 Sum_probs=21.9
Q ss_pred CCCEEEEcccCCCCCCC--cChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 49 GCKGVFCVATPRTLEDP--VGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 49 ~~d~V~HlAa~~~~~~~--~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.+.+|||.++|...... .+. .+.+.. ..+++|+.|.+.
T Consensus 77 ~~k~VIHavgP~~~~~~~~~~~-~~~L~~---~~~~~L~~a~~~ 116 (147)
T cd02906 77 PAKYVIHTVGPIIERGLTTPIH-RDLLAK---CYLSCLDLAEKA 116 (147)
T ss_pred CCCEEEEECCCcccCCCCCccH-HHHHHH---HHHHHHHHHHHc
Confidence 47899999999643211 122 234443 456666666654
No 295
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=66.99 E-value=24 Score=24.95 Aligned_cols=45 Identities=7% Similarity=-0.071 Sum_probs=34.3
Q ss_pred ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 44 RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 44 ~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
-+.++++|+|+-+|+...-+. .+. .+.++.|+.-...+.+..+++
T Consensus 74 ~~~~~daDvVVitAG~~~k~g-~tR-~dll~~Na~i~~~i~~~i~~~ 118 (323)
T TIGR01759 74 EEAFKDVDAALLVGAFPRKPG-MER-ADLLSKNGKIFKEQGKALNKV 118 (323)
T ss_pred HHHhCCCCEEEEeCCCCCCCC-CcH-HHHHHHHHHHHHHHHHHHHhh
Confidence 356689999999999864322 344 478999999999988887764
No 296
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=65.83 E-value=27 Score=24.65 Aligned_cols=45 Identities=7% Similarity=-0.084 Sum_probs=33.9
Q ss_pred ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 44 RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 44 ~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.+.++++|+||-+|+...-+. .+. .+.+..|+.-...+.+...++
T Consensus 73 ~~~~~daDivvitaG~~~k~g-~tR-~dll~~N~~i~~~i~~~i~~~ 117 (322)
T cd01338 73 NVAFKDADWALLVGAKPRGPG-MER-ADLLKANGKIFTAQGKALNDV 117 (322)
T ss_pred HHHhCCCCEEEEeCCCCCCCC-CcH-HHHHHHHHHHHHHHHHHHHhh
Confidence 356789999999999865432 344 478999999988888877654
No 297
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=62.83 E-value=31 Score=24.02 Aligned_cols=44 Identities=11% Similarity=-0.054 Sum_probs=33.6
Q ss_pred cccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 45 FTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 45 ~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
+.++++|+|+=.|+...-+. .+. .+.++.|+.-.+.+.+..+++
T Consensus 60 ~~~~daDivVitag~~rk~g-~~R-~dll~~N~~i~~~~~~~i~~~ 103 (299)
T TIGR01771 60 SDCKDADLVVITAGAPQKPG-ETR-LELVGRNVRIMKSIVPEVVKS 103 (299)
T ss_pred HHHCCCCEEEECCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHh
Confidence 46789999999999864332 343 478999999999888887764
No 298
>cd02904 Macro_H2A_like Macro domain, Macro_H2A_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. Members of this family are similar to macroH2A, a variant of the major-type core histone H2A, which contains an N-terminal H2A domain and a C-terminal nonhistone macro domain. Histone macroH2A is enriched on the inactive X chromosome of mammalian female cells. It does not bind poly ADP-r
Probab=62.65 E-value=31 Score=22.57 Aligned_cols=36 Identities=22% Similarity=0.052 Sum_probs=21.3
Q ss_pred CCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 49 GCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 49 ~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.+.+|||.++|... . ... ++.+... .+|.|+.|.+.
T Consensus 91 p~k~VIHtVgP~~~-~-~~~-~~~L~~~---~~~~L~~A~e~ 126 (186)
T cd02904 91 PAKFVIHCHSPQWG-S-DKC-EEQLEKT---VKNCLAAAEDK 126 (186)
T ss_pred CCCEEEEeCCCCCC-C-Cch-HHHHHHH---HHHHHHHHHHc
Confidence 37999999998642 1 122 2344443 45666666654
No 299
>cd02907 Macro_Af1521_BAL_like Macro domain, Af1521- and BAL-like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. The macro domains in this family show similarity to Af1521, a protein from Archaeoglobus fulgidus containing a stand-alone macro domain. Af1521 binds ADP-ribose and exhibits phosphatase activity toward Appr-1"-p. Also included in this family are the N-terminal (or first) macro domains
Probab=62.46 E-value=37 Score=21.49 Aligned_cols=38 Identities=29% Similarity=0.262 Sum_probs=21.4
Q ss_pred CCCEEEEcccCCCCCCC-cChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 49 GCKGVFCVATPRTLEDP-VGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 49 ~~d~V~HlAa~~~~~~~-~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.+.+|||.++|...... .+. .+.+ -...+++|+.|.+.
T Consensus 73 ~~k~IiH~v~P~~~~~~~~~~-~~~L---~~~~~~~L~~a~~~ 111 (175)
T cd02907 73 PCKYVIHAVGPRWSGGEAEEC-VEKL---KKAILNSLRKAEEL 111 (175)
T ss_pred CCCEEEEeCCCcCCCCCCchH-HHHH---HHHHHHHHHHHHHc
Confidence 47999999988643211 111 1233 34556666666543
No 300
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=62.36 E-value=18 Score=25.19 Aligned_cols=41 Identities=5% Similarity=-0.120 Sum_probs=28.2
Q ss_pred CCCCEEEEcccCCC---CCC----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 48 EGCKGVFCVATPRT---LED----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 48 ~~~d~V~HlAa~~~---~~~----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
..+|++||.|+... .+. ..+. ...++.|+.|...+.+++..
T Consensus 119 G~iDiLVnNAG~~~~~~~~~~~~~~e~~-~~~~~vN~~~~~~l~~~~~p 166 (303)
T PLN02730 119 GSIDILVHSLANGPEVTKPLLETSRKGY-LAAISASSYSFVSLLQHFGP 166 (303)
T ss_pred CCCCEEEECCCccccCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHH
Confidence 35899999996431 111 1233 46789999999999887653
No 301
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=61.84 E-value=17 Score=24.58 Aligned_cols=56 Identities=13% Similarity=-0.006 Sum_probs=39.0
Q ss_pred eEEEecCcc-cc--ccc-------cCCCCEEEEcccCCCCC-----CCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 33 LAYWTPTLF-NG--RFT-------VEGCKGVFCVATPRTLE-----DPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 33 ~~~v~~Dl~-~~--~~~-------~~~~d~V~HlAa~~~~~-----~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
-.-+.+|+. .. +.. +..+++++++|+++.-. ..+++ .+.+..|+.|+.-+.+++.+
T Consensus 64 h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qw-d~vi~vNL~gvfl~tqaa~r 134 (256)
T KOG1200|consen 64 HSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQW-DSVIAVNLTGVFLVTQAAVR 134 (256)
T ss_pred cceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHH-HHHHHhhchhhHHHHHHHHH
Confidence 334678888 33 221 23579999999997421 13455 47899999999999888765
No 302
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=61.50 E-value=37 Score=23.76 Aligned_cols=47 Identities=9% Similarity=0.012 Sum_probs=33.6
Q ss_pred cccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 45 FTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 45 ~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
+.++++|+|+=.|+...-+.......+.++.|..-...+.+..++++
T Consensus 64 ~~~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~ 110 (307)
T cd05290 64 DDCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVT 110 (307)
T ss_pred HHhCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45689999999999864333221024789999999988888877653
No 303
>PF01661 Macro: Macro domain; InterPro: IPR002589 The Macro or A1pp domain is a module of about 180 amino acids which can bind ADP-ribose, an NAD metabolite or related ligands. Binding to ADP-ribose could be either covalent or non-covalent []: in certain cases it is believed to bind non-covalently []; while in other cases (such as Aprataxin) it appears to bind both non-covalently through a zinc finger motif, and covalently through a separate region of the protein []. The domain was described originally in association with ADP-ribose 1''-phosphate (Appr-1''-P) processing activity (A1pp) of the yeast YBR022W protein []. The domain is also called Macro domain as it is the C-terminal domain of mammalian core histone macro-H2A [, ]. Macro domain proteins can be found in eukaryotes, in (mostly pathogenic) bacteria, in archaea and in ssRNA viruses, such as coronaviruses, Rubella and Hepatitis E viruses. In vertebrates the domain occurs e.g. in histone macroH2A, in predicted poly-ADP-ribose polymerases (PARPs) and in B aggressive lymphoma (BAL) protein. The macro domain can be associated with catalytic domains, such as PARP, or sirtuin. The Macro domain can recognise ADP-ribose or in some cases poly-ADP-ribose, which can be involved in ADP-ribosylation reactions that occur in important processes, such as chromatin biology, DNA repair and transcription regulation []. The human macroH2A1.1 Macro domain binds an NAD metabolite O-acetyl-ADP-ribose []. The Macro domain has been suggested to play a regulatory role in ADP-ribosylation, which is involved in inter- and intracellular signaling, transcriptional regulation, DNA repair pathways and maintenance of genomic stability, telomere dynamics, cell differentiation and proliferation, and necrosis and apoptosis. The 3D structure of the Macro domain has a mixed alpha/beta fold of a mixed beta sheet sandwiched between four helices. Several Macro domain only domains are shorter than the structure of AF1521 and lack either the first strand or the C-terminal helix 5. Well conserved residues form a hydrophobic cleft and cluster around the AF1521-ADP-ribose binding site [, , , ]. ; PDB: 2DX6_A 2XD7_D 3Q71_A 2FAV_B 1SPV_A 3EKE_A 3EJF_A 1YD9_B 3GPG_B 3GPQ_A ....
Probab=61.46 E-value=29 Score=19.86 Aligned_cols=39 Identities=18% Similarity=0.084 Sum_probs=21.8
Q ss_pred CCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 49 GCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 49 ~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.+.+|+|+.+|........+..+.+ .....++|+.|.+.
T Consensus 54 ~~~~Iih~v~P~~~~~~~~~~~~~L---~~~~~~~l~~a~~~ 92 (118)
T PF01661_consen 54 PCKYIIHAVGPTYNSPGEKNSYEAL---ESAYRNALQKAEEN 92 (118)
T ss_dssp SSSEEEEEEEEETTTSTSTTHHHHH---HHHHHHHHHHHHHT
T ss_pred cccceEEEecceeccccccccHHHH---HHHHHHHHHHHHHc
Confidence 3789999988764311122222333 34556666666653
No 304
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=60.83 E-value=6.7 Score=28.64 Aligned_cols=53 Identities=6% Similarity=-0.110 Sum_probs=35.5
Q ss_pred ecCCCCChhhh-hhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEcccCCC
Q 042773 4 AIFPGSDPSHL-FCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVATPRT 61 (91)
Q Consensus 4 ~vr~~~k~~~l-~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa~~~ 61 (91)
..||++|.+++ +....... . +++..-++.+|.. ++ ++..+-+..|+++++|..
T Consensus 39 AGRn~~KL~~vL~~~~~k~~---~--~ls~~~i~i~D~~n~~Sl~emak~~~vivN~vGPyR 95 (423)
T KOG2733|consen 39 AGRNEKKLQEVLEKVGEKTG---T--DLSSSVILIADSANEASLDEMAKQARVIVNCVGPYR 95 (423)
T ss_pred ecCCHHHHHHHHHHHhhccC---C--CcccceEEEecCCCHHHHHHHHhhhEEEEeccccce
Confidence 46888887644 44433211 1 2344448889998 66 666677999999999974
No 305
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=59.85 E-value=45 Score=23.46 Aligned_cols=45 Identities=16% Similarity=0.044 Sum_probs=30.3
Q ss_pred cccCCCCEEEEcccCCCCCCCcC---hHHHHHHHHHHHHHHHHHHHHH
Q 042773 45 FTVEGCKGVFCVATPRTLEDPVG---LEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 45 ~~~~~~d~V~HlAa~~~~~~~~~---~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
+.++++|+||-.|+...-+...+ ...+.+..|+.-.+.+.+...+
T Consensus 70 ~~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~ 117 (321)
T PTZ00082 70 EDIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKK 117 (321)
T ss_pred HHhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999998764322211 2346778888777777766654
No 306
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=59.52 E-value=36 Score=23.83 Aligned_cols=44 Identities=7% Similarity=-0.096 Sum_probs=33.2
Q ss_pred cccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 45 FTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 45 ~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
+.++++|+||-+|+...-+. .+. .+.++.|..-.+.+.+..+++
T Consensus 69 ~~~~~adivIitag~~~k~g-~~R-~dll~~N~~i~~~i~~~i~~~ 112 (315)
T PRK00066 69 SDCKDADLVVITAGAPQKPG-ETR-LDLVEKNLKIFKSIVGEVMAS 112 (315)
T ss_pred HHhCCCCEEEEecCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHh
Confidence 34689999999999864432 343 478999999999888877764
No 307
>cd02908 Macro_Appr_pase_like Macro domain, Appr-1"-pase_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. This family is composed of uncharacterized proteins that show similarity to Appr-1"-pase, containing conserved putative active site residues. Appr-1"-pase is a phosphatase specific for ADP-ribose-1"-monophosphate.
Probab=58.75 E-value=41 Score=21.09 Aligned_cols=38 Identities=24% Similarity=0.050 Sum_probs=21.2
Q ss_pred CCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 49 GCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 49 ~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
++.+|||.++|...+...+. .+.+. ...+++|+.|.+.
T Consensus 67 ~~~~IiH~v~P~~~~~~~~~-~~~L~---~~~~~~L~~a~~~ 104 (165)
T cd02908 67 PAKYVIHTVGPVWRGGQHNE-AELLA---SCYRNSLELAREN 104 (165)
T ss_pred CCCEEEEEcCCcccCCCCcH-HHHHH---HHHHHHHHHHHHc
Confidence 47899999998643211121 23333 3455666666543
No 308
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=58.34 E-value=14 Score=25.40 Aligned_cols=74 Identities=11% Similarity=-0.051 Sum_probs=46.2
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccc----c----CCCCEEEEcccCC-CCCC----
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFT----V----EGCKGVFCVATPR-TLED---- 64 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~----~----~~~d~V~HlAa~~-~~~~---- 64 (91)
|-||.|..+.-..|... .++...+.|+. ++ .+. . ...|+.++=|+.. ..|.
T Consensus 35 V~AtaR~~e~M~~L~~~-------------~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~ 101 (289)
T KOG1209|consen 35 VYATARRLEPMAQLAIQ-------------FGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDAT 101 (289)
T ss_pred EEEEccccchHhhHHHh-------------hCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCC
Confidence 34677777765444433 25556778888 54 221 1 1368999888865 2222
Q ss_pred CcChHHHHHHHHHHHHHHHHHHHH
Q 042773 65 PVGLEKELALPAVQGTLNVLEAAK 88 (91)
Q Consensus 65 ~~~~~~~~~~~nv~gt~nlLeaa~ 88 (91)
..+- +.++++|+.|..++.++..
T Consensus 102 i~av-e~~f~vNvfG~irM~~a~~ 124 (289)
T KOG1209|consen 102 IAAV-EQCFKVNVFGHIRMCRALS 124 (289)
T ss_pred HHHH-HhhhccceeeeehHHHHHH
Confidence 2232 4788999999999888765
No 309
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=57.24 E-value=45 Score=23.45 Aligned_cols=44 Identities=11% Similarity=-0.012 Sum_probs=33.0
Q ss_pred cccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 45 FTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 45 ~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
+.++++|+|+-.|+...-+. .+. .+.++.|..-...+.+..+++
T Consensus 63 ~~~~daDivvitaG~~~~~g-~~R-~dll~~N~~I~~~i~~~i~~~ 106 (312)
T TIGR01772 63 NALKGADVVVIPAGVPRKPG-MTR-DDLFNVNAGIVKDLVAAVAES 106 (312)
T ss_pred HHcCCCCEEEEeCCCCCCCC-ccH-HHHHHHhHHHHHHHHHHHHHh
Confidence 56789999999999865432 344 478899998888888777654
No 310
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=57.20 E-value=43 Score=23.53 Aligned_cols=44 Identities=11% Similarity=-0.019 Sum_probs=33.5
Q ss_pred cccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 45 FTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 45 ~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
+.++++|+|+-+|+...-+. .+. .+.++.|..-...+.+..+++
T Consensus 64 ~~~~daDivvitaG~~~k~g-~tR-~dll~~N~~i~~~i~~~i~~~ 107 (310)
T cd01337 64 KALKGADVVVIPAGVPRKPG-MTR-DDLFNINAGIVRDLATAVAKA 107 (310)
T ss_pred HhcCCCCEEEEeCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHh
Confidence 45789999999999864332 344 478999999999888877654
No 311
>TIGR01756 LDH_protist lactate dehydrogenase. This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.
Probab=57.06 E-value=50 Score=23.23 Aligned_cols=44 Identities=14% Similarity=-0.080 Sum_probs=33.8
Q ss_pred cccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 45 FTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 45 ~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
+.++++|+|+=+|+...-+. .+. .+.++.|+.-...+.+...++
T Consensus 56 ~~~~daDiVVitaG~~~k~g-~tR-~dll~~N~~I~~~i~~~i~~~ 99 (313)
T TIGR01756 56 EAFKDIDCAFLVASVPLKPG-EVR-ADLLTKNTPIFKATGEALSEY 99 (313)
T ss_pred HHhCCCCEEEECCCCCCCcC-CCH-HHHHHHHHHHHHHHHHHHHhh
Confidence 56789999999999864322 344 478999999999888877664
No 312
>PF10154 DUF2362: Uncharacterized conserved protein (DUF2362); InterPro: IPR019311 This is a family of proteins conserved from nematodes to humans. The function is not known.
Probab=55.85 E-value=13 Score=28.12 Aligned_cols=54 Identities=17% Similarity=0.278 Sum_probs=33.8
Q ss_pred EEecCcc-ccccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHcC
Q 042773 35 YWTPTLF-NGRFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRLG 91 (91)
Q Consensus 35 ~v~~Dl~-~~~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~g 91 (91)
+-.||+. .---.+.++.+||||.+--.... .+- ..-.+-+.|-+|+|..|.++|
T Consensus 372 l~~gd~yitrhsnl~~~~vvfhlv~d~~~~~-~~~--~~r~~~~~glrnil~~~~~~~ 426 (510)
T PF10154_consen 372 LKPGDFYITRHSNLSDVHVVFHLVVDDSLRS-SNI--NSRHPIILGLRNILRTASRYD 426 (510)
T ss_pred CCCCceEEecccCcccceEEEEEEecCcccc-CCC--CCcChHHHHHHHHHHHHHHcC
Confidence 4456665 22123467899999987655421 110 122346889999999998764
No 313
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=55.81 E-value=34 Score=23.70 Aligned_cols=41 Identities=5% Similarity=-0.104 Sum_probs=28.7
Q ss_pred CCCCEEEEcccCCC--CCC-----CcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 48 EGCKGVFCVATPRT--LED-----PVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 48 ~~~d~V~HlAa~~~--~~~-----~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
..+|++||.|+... ... .++. ...++.|+.|..++.+++..
T Consensus 118 G~lDvLVnNAG~~~~~~~~~~~~~~e~~-~~~~~vNl~g~~~l~~a~~p 165 (299)
T PRK06300 118 GHIDILVHSLANSPEISKPLLETSRKGY-LAALSTSSYSFVSLLSHFGP 165 (299)
T ss_pred CCCcEEEECCCcCcccCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHH
Confidence 35899999997532 111 1233 46789999999999988763
No 314
>cd02903 Macro_BAL_like Macro domain, BAL_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. Members of this family show similarity to BAL (B-aggressive lymphoma) proteins, which contain one to three macro domains. Most BAL family macro domains belong to this family except for the most N-terminal domain in multiple-domain containing proteins. Most BAL proteins also contain a C-termin
Probab=55.44 E-value=45 Score=20.25 Aligned_cols=35 Identities=26% Similarity=0.327 Sum_probs=20.1
Q ss_pred CCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 49 GCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 49 ~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.+.+|||+++|.... +. ...+. ...+++|+.|.+.
T Consensus 70 ~~k~IiH~~~p~~~~---~~-~~~l~---~~~~~~L~~a~~~ 104 (137)
T cd02903 70 PCKYVYHVVLPNWSN---GA-LKILK---DIVSECLEKCEEL 104 (137)
T ss_pred CCCEEEEecCCCCCC---ch-HHHHH---HHHHHHHHHHHHC
Confidence 479999999886431 11 12333 3445566666554
No 315
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=55.06 E-value=45 Score=23.59 Aligned_cols=56 Identities=9% Similarity=-0.162 Sum_probs=37.8
Q ss_pred CeEEEecCcc-cc---------ccccCCCCEEEEcccCCCCCC---CcCh-HHHHHHHHHHHHHHHHHHH
Q 042773 32 RLAYWTPTLF-NG---------RFTVEGCKGVFCVATPRTLED---PVGL-EKELALPAVQGTLNVLEAA 87 (91)
Q Consensus 32 ~~~~v~~Dl~-~~---------~~~~~~~d~V~HlAa~~~~~~---~~~~-~~~~~~~nv~gt~nlLeaa 87 (91)
++....+|++ ++ ++-+.+++++++=||...... ..+. .+.++++|+.|..+...+.
T Consensus 87 ~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaF 156 (300)
T KOG1201|consen 87 EAKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAF 156 (300)
T ss_pred ceeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 5677889999 44 222346899999999875432 2221 2457889999988876654
No 316
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=54.40 E-value=55 Score=22.37 Aligned_cols=81 Identities=9% Similarity=-0.107 Sum_probs=47.2
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccc--------cCCCCEEEEcccCCCCC-C-----
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFT--------VEGCKGVFCVATPRTLE-D----- 64 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~--------~~~~d~V~HlAa~~~~~-~----- 64 (91)
..+.|++++.+......... .... +++..+.+|+. .. +.+ +...|.+++-|+..... .
T Consensus 36 ~i~~r~~~~~~~~~~~~~~~-~~~~----~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s 110 (270)
T KOG0725|consen 36 VITGRSEERLEETAQELGGL-GYTG----GKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLS 110 (270)
T ss_pred EEEeCCHHHHHHHHHHHHhc-CCCC----CeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCC
Confidence 45667766654443322211 1111 47888999998 43 221 23489999999987532 1
Q ss_pred CcChHHHHHHHHHHH-HHHHHHHHH
Q 042773 65 PVGLEKELALPAVQG-TLNVLEAAK 88 (91)
Q Consensus 65 ~~~~~~~~~~~nv~g-t~nlLeaa~ 88 (91)
.+++ ..++++|+.| +..+..++.
T Consensus 111 ~e~~-d~~~~~Nl~G~~~~~~~~a~ 134 (270)
T KOG0725|consen 111 EEVF-DKIMATNLRGSAFCLKQAAR 134 (270)
T ss_pred HHHH-HHHHhhhchhHHHHHHHHHH
Confidence 1233 3678889995 566555554
No 317
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=52.29 E-value=58 Score=22.54 Aligned_cols=43 Identities=9% Similarity=-0.060 Sum_probs=32.5
Q ss_pred ccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 46 TVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 46 ~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.++++|.||.+++...-+. .+. .+.++.|..-...+.+..+++
T Consensus 65 ~l~~aDIVIitag~~~~~g-~~R-~dll~~N~~i~~~~~~~i~~~ 107 (306)
T cd05291 65 DCKDADIVVITAGAPQKPG-ETR-LDLLEKNAKIMKSIVPKIKAS 107 (306)
T ss_pred HhCCCCEEEEccCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHh
Confidence 4689999999998764322 343 478899999988888887764
No 318
>PRK00431 RNase III inhibitor; Provisional
Probab=51.91 E-value=58 Score=20.58 Aligned_cols=37 Identities=24% Similarity=0.091 Sum_probs=20.5
Q ss_pred CCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 49 GCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 49 ~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.+.+|||+++|........ ..+.+. ....++|+.|.+
T Consensus 74 ~~~~IiH~v~P~~~~~~~~-~~~~L~---~~~~~~L~~a~~ 110 (177)
T PRK00431 74 PAKYVIHTVGPVWRGGEDN-EAELLA---SAYRNSLRLAAE 110 (177)
T ss_pred CCCEEEEecCCeecCCCCc-HHHHHH---HHHHHHHHHHHH
Confidence 4789999999874321111 123333 344556666554
No 319
>PRK05442 malate dehydrogenase; Provisional
Probab=51.83 E-value=64 Score=22.82 Aligned_cols=44 Identities=9% Similarity=-0.082 Sum_probs=33.5
Q ss_pred ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 44 RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 44 ~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.+.++++|+|+-+|+...-+. .+. .+.++.|..-...+.+...+
T Consensus 75 y~~~~daDiVVitaG~~~k~g-~tR-~dll~~Na~i~~~i~~~i~~ 118 (326)
T PRK05442 75 NVAFKDADVALLVGARPRGPG-MER-KDLLEANGAIFTAQGKALNE 118 (326)
T ss_pred HHHhCCCCEEEEeCCCCCCCC-CcH-HHHHHHHHHHHHHHHHHHHH
Confidence 356789999999999754322 344 47899999999998887766
No 320
>PLN00135 malate dehydrogenase
Probab=47.28 E-value=85 Score=22.08 Aligned_cols=43 Identities=14% Similarity=0.009 Sum_probs=33.5
Q ss_pred cccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 45 FTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 45 ~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
+.++++|+|+=+|+...-+. .+. .+.+..|+.-...+.....+
T Consensus 54 ~~~~daDiVVitAG~~~k~g-~sR-~dll~~N~~I~~~i~~~i~~ 96 (309)
T PLN00135 54 EACKGVNIAVMVGGFPRKEG-MER-KDVMSKNVSIYKSQASALEK 96 (309)
T ss_pred HHhCCCCEEEEeCCCCCCCC-CcH-HHHHHHHHHHHHHHHHHHHH
Confidence 45689999999999864432 344 47899999999998888776
No 321
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=46.70 E-value=92 Score=21.55 Aligned_cols=44 Identities=11% Similarity=-0.054 Sum_probs=32.6
Q ss_pred cccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 45 FTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 45 ~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
+.++++|+||-+|+...-+. .+. .+.+..|+.-.+.+.+..+++
T Consensus 62 ~~l~~aDiVIitag~p~~~~-~~R-~~l~~~n~~i~~~~~~~i~~~ 105 (300)
T cd00300 62 ADAADADIVVITAGAPRKPG-ETR-LDLINRNAPILRSVITNLKKY 105 (300)
T ss_pred HHhCCCCEEEEcCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHh
Confidence 46789999999998764322 343 477888998888888877654
No 322
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=46.44 E-value=53 Score=23.45 Aligned_cols=44 Identities=11% Similarity=-0.037 Sum_probs=34.0
Q ss_pred ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 44 RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 44 ~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++++++|.|+=-|+...-|.++. ++.+..|-.-...|..++.+
T Consensus 91 ~~al~~advVvIPAGVPRKPGMTR--DDLFn~NAgIv~~l~~aia~ 134 (345)
T KOG1494|consen 91 ENALKGADVVVIPAGVPRKPGMTR--DDLFNINAGIVKTLAAAIAK 134 (345)
T ss_pred HHHhcCCCEEEecCCCCCCCCCcH--HHhhhcchHHHHHHHHHHHh
Confidence 667889999999998875444432 47899998888888888765
No 323
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=46.02 E-value=32 Score=23.44 Aligned_cols=74 Identities=7% Similarity=-0.123 Sum_probs=46.0
Q ss_pred CeeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--cccc-------CCCCEEEEcccCCCCCC------
Q 042773 1 MNAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTV-------EGCKGVFCVATPRTLED------ 64 (91)
Q Consensus 1 ~~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~-------~~~d~V~HlAa~~~~~~------ 64 (91)
|..+.|++++.++.+... |.+.-+.+|+. .+ ++.+ ...+++++.||.-..-.
T Consensus 32 VIi~gR~e~~L~e~~~~~------------p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~ 99 (245)
T COG3967 32 VIICGRNEERLAEAKAEN------------PEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAED 99 (245)
T ss_pred EEEecCcHHHHHHHHhcC------------cchheeeecccchhhHHHHHHHHHhhCCchheeeecccccchhhccCCcc
Confidence 456778877765555542 56767788998 44 3222 24699999999752211
Q ss_pred -CcChHHHHHHHHHHHHHHHHHHH
Q 042773 65 -PVGLEKELALPAVQGTLNVLEAA 87 (91)
Q Consensus 65 -~~~~~~~~~~~nv~gt~nlLeaa 87 (91)
.++. .+-+..|+.+...|..+.
T Consensus 100 ~~~~~-~~eI~~Nl~API~Lt~~~ 122 (245)
T COG3967 100 LLDDA-EQEIATNLLAPIRLTALL 122 (245)
T ss_pred hhhHH-HHHHHHhhhhHHHHHHHH
Confidence 1222 244677888888876654
No 324
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=44.82 E-value=74 Score=21.75 Aligned_cols=27 Identities=15% Similarity=0.002 Sum_probs=15.3
Q ss_pred EEEecCcc-cc-ccccC--CCCEEEEcccCC
Q 042773 34 AYWTPTLF-NG-RFTVE--GCKGVFCVATPR 60 (91)
Q Consensus 34 ~~v~~Dl~-~~-~~~~~--~~d~V~HlAa~~ 60 (91)
.++.+-+. .. .+.+. +++.||+.+.|.
T Consensus 46 ~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPf 76 (256)
T TIGR00715 46 TVHTGALDPQELREFLKRHSIDILVDATHPF 76 (256)
T ss_pred eEEECCCCHHHHHHHHHhcCCCEEEEcCCHH
Confidence 34444444 34 44443 589999976653
No 325
>PRK04143 hypothetical protein; Provisional
Probab=44.26 E-value=88 Score=21.63 Aligned_cols=14 Identities=21% Similarity=0.064 Sum_probs=11.2
Q ss_pred CCCEEEEcccCCCC
Q 042773 49 GCKGVFCVATPRTL 62 (91)
Q Consensus 49 ~~d~V~HlAa~~~~ 62 (91)
.+.+|||.++|...
T Consensus 160 p~kyVIHtVgP~~~ 173 (264)
T PRK04143 160 PAKYVIHTVGPIIR 173 (264)
T ss_pred CCCEEEEECCCccc
Confidence 36899999998743
No 326
>cd02749 Macro Macro domain, a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes.
Probab=44.16 E-value=70 Score=19.15 Aligned_cols=38 Identities=18% Similarity=0.140 Sum_probs=23.2
Q ss_pred CCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 49 GCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 49 ~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
++.+|+|+.+|..... .+ ....+.-..+..++|+.+.+
T Consensus 72 ~~~~vih~~~p~~~~~--~~-~~~~~~l~~a~~~~L~~~~~ 109 (147)
T cd02749 72 GAKYLIHIVGPKYNQG--NN-KAAFELLKNAYENCLKEAEE 109 (147)
T ss_pred cCCEEEEeCCCCCCCC--CC-chHHHHHHHHHHHHHHHHHH
Confidence 4899999999865421 11 12233455667777777654
No 327
>PHA02099 hypothetical protein
Probab=43.94 E-value=19 Score=19.93 Aligned_cols=14 Identities=29% Similarity=0.283 Sum_probs=11.2
Q ss_pred ccCCCCEEEEcccC
Q 042773 46 TVEGCKGVFCVATP 59 (91)
Q Consensus 46 ~~~~~d~V~HlAa~ 59 (91)
.++|+|.|||.-++
T Consensus 40 ~~~g~diifha~gy 53 (84)
T PHA02099 40 NFEGVDIVFHAEGY 53 (84)
T ss_pred ecCCccEEEEcCCC
Confidence 35789999998665
No 328
>PF11848 DUF3368: Domain of unknown function (DUF3368); InterPro: IPR021799 This domain is functionally uncharacterised. This domain is found in bacteria and archaea. This presumed domain is about 50 amino acids in length.
Probab=43.62 E-value=14 Score=18.55 Aligned_cols=15 Identities=60% Similarity=0.771 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHcC
Q 042773 77 VQGTLNVLEAAKRLG 91 (91)
Q Consensus 77 v~gt~nlLeaa~~~g 91 (91)
|.||..+|-.|++.|
T Consensus 2 v~GTlGiL~~Ak~~G 16 (48)
T PF11848_consen 2 VTGTLGILLLAKRRG 16 (48)
T ss_pred ceehHHHHHHHHHcC
Confidence 568888888888765
No 329
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=42.46 E-value=14 Score=23.60 Aligned_cols=48 Identities=6% Similarity=-0.137 Sum_probs=25.8
Q ss_pred eeecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc--ccccCCCCEEEEccc
Q 042773 2 NAAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG--RFTVEGCKGVFCVAT 58 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~--~~~~~~~d~V~HlAa 58 (91)
....|+.++.+.+.+.+.+ . .+.++...|.. .+ .+.+.++|.||+..+
T Consensus 56 ~l~~R~~~~~~~l~~~l~~----~-----~~~~~~~~~~~~~~~~~~~~~~~diVi~at~ 106 (194)
T cd01078 56 VLVGRDLERAQKAADSLRA----R-----FGEGVGAVETSDDAARAAAIKGADVVFAAGA 106 (194)
T ss_pred EEEcCCHHHHHHHHHHHHh----h-----cCCcEEEeeCCCHHHHHHHHhcCCEEEECCC
Confidence 3456776666655554321 0 12334444555 22 456678888888544
No 330
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=42.18 E-value=99 Score=21.68 Aligned_cols=43 Identities=16% Similarity=0.085 Sum_probs=31.8
Q ss_pred ccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 46 TVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 46 ~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.++++|+|+-+|+...-+. .+. .+.++.|..-.+.+.+..+++
T Consensus 68 ~~~~adivvitaG~~~k~g-~~R-~dll~~N~~i~~~~~~~i~~~ 110 (312)
T cd05293 68 VTANSKVVIVTAGARQNEG-ESR-LDLVQRNVDIFKGIIPKLVKY 110 (312)
T ss_pred HhCCCCEEEECCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHHh
Confidence 3689999999998765432 343 478899998888887777654
No 331
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=40.81 E-value=1e+02 Score=22.57 Aligned_cols=43 Identities=9% Similarity=-0.133 Sum_probs=33.1
Q ss_pred cccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 45 FTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 45 ~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
+.++++|+||-+|+...-+. .+. .+.++.|+.-...+.+...+
T Consensus 116 ~~~kdaDIVVitAG~prkpg-~tR-~dll~~N~~I~k~i~~~I~~ 158 (387)
T TIGR01757 116 EVFEDADWALLIGAKPRGPG-MER-ADLLDINGQIFADQGKALNA 158 (387)
T ss_pred HHhCCCCEEEECCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999864332 344 47899999999888887765
No 332
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=40.62 E-value=24 Score=22.88 Aligned_cols=32 Identities=3% Similarity=-0.051 Sum_probs=18.4
Q ss_pred CCeEEEecCcc-c---c-ccccCCCCEEEEcccCCCC
Q 042773 31 SRLAYWTPTLF-N---G-RFTVEGCKGVFCVATPRTL 62 (91)
Q Consensus 31 ~~~~~v~~Dl~-~---~-~~~~~~~d~V~HlAa~~~~ 62 (91)
++++++...-. + . .+.+..+|++||.|++.+.
T Consensus 59 ~~~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVsDf 95 (185)
T PF04127_consen 59 PGVKVIRVESAEEMLEAVKELLPSADIIIMAAAVSDF 95 (185)
T ss_dssp TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--SE
T ss_pred ccceEEEecchhhhhhhhccccCcceeEEEecchhhe
Confidence 36666664433 1 1 4455678999999999875
No 333
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=40.03 E-value=1.1e+02 Score=22.89 Aligned_cols=43 Identities=7% Similarity=-0.145 Sum_probs=33.2
Q ss_pred cccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 45 FTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 45 ~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
+.++++|+||=+|+...-+. .+. .+.++.|+.-...+.+...+
T Consensus 172 e~~kdaDiVVitAG~prkpG-~tR-~dLl~~N~~I~k~i~~~I~~ 214 (444)
T PLN00112 172 EVFQDAEWALLIGAKPRGPG-MER-ADLLDINGQIFAEQGKALNE 214 (444)
T ss_pred HHhCcCCEEEECCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHH
Confidence 56689999999999864332 344 47899999999888887766
No 334
>PLN02602 lactate dehydrogenase
Probab=39.28 E-value=1.2e+02 Score=21.79 Aligned_cols=43 Identities=12% Similarity=0.074 Sum_probs=31.6
Q ss_pred ccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 46 TVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 46 ~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.++++|+|+=+|+...-+. .+. .+.+..|+.-...+.+..+++
T Consensus 102 ~~~daDiVVitAG~~~k~g-~tR-~dll~~N~~I~~~i~~~I~~~ 144 (350)
T PLN02602 102 VTAGSDLCIVTAGARQIPG-ESR-LNLLQRNVALFRKIIPELAKY 144 (350)
T ss_pred HhCCCCEEEECCCCCCCcC-CCH-HHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999999864332 343 478888988888887777654
No 335
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=38.75 E-value=1.2e+02 Score=20.35 Aligned_cols=45 Identities=11% Similarity=-0.020 Sum_probs=32.7
Q ss_pred ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 44 RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 44 ~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.++++++|+|+-.++....+.. +. .+....|+...+.+.+..++.
T Consensus 65 ~~~~~~aDiVv~t~~~~~~~g~-~r-~~~~~~n~~i~~~i~~~i~~~ 109 (263)
T cd00650 65 YEAFKDADVVIITAGVGRKPGM-GR-LDLLKRNVPIVKEIGDNIEKY 109 (263)
T ss_pred HHHhCCCCEEEECCCCCCCcCC-CH-HHHHHHHHHHHHHHHHHHHHH
Confidence 4667899999999987654332 32 367788888888888777653
No 336
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=38.09 E-value=1.2e+02 Score=22.81 Aligned_cols=45 Identities=7% Similarity=-0.129 Sum_probs=33.4
Q ss_pred ccccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 44 RFTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 44 ~~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
.+.++++|+||=+|+...-+. .+. .+.++.|+.-...+.++..++
T Consensus 194 ~ea~~daDvvIitag~prk~G-~~R-~DLL~~N~~Ifk~~g~~I~~~ 238 (452)
T cd05295 194 DVAFKDAHVIVLLDDFLIKEG-EDL-EGCIRSRVAICQLYGPLIEKN 238 (452)
T ss_pred HHHhCCCCEEEECCCCCCCcC-CCH-HHHHHHHHHHHHHHHHHHHHh
Confidence 456789999999999864332 343 478999998888887776653
No 337
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=36.55 E-value=1.5e+02 Score=21.09 Aligned_cols=44 Identities=11% Similarity=-0.007 Sum_probs=32.3
Q ss_pred cccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 45 FTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 45 ~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
+.++|+|.|+=.|+...-|.+ +. .+.++.|..-...+.+...+.
T Consensus 65 ~~~~~aDiVvitAG~prKpGm-tR-~DLl~~Na~I~~~i~~~i~~~ 108 (313)
T COG0039 65 EDLKGADIVVITAGVPRKPGM-TR-LDLLEKNAKIVKDIAKAIAKY 108 (313)
T ss_pred hhhcCCCEEEEeCCCCCCCCC-CH-HHHHHhhHHHHHHHHHHHHhh
Confidence 456899999999987754333 33 478899998888877776553
No 338
>cd03330 Macro_2 Macro domain, Unknown family 2. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. This family is composed of uncharacterized proteins containing a stand-alone macro domain.
Probab=36.50 E-value=95 Score=18.50 Aligned_cols=35 Identities=23% Similarity=0.132 Sum_probs=20.3
Q ss_pred CCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHc
Q 042773 50 CKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKRL 90 (91)
Q Consensus 50 ~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~~ 90 (91)
+.+|||++++.... ..+ .+.+ ..+..++|+.|.+.
T Consensus 68 ~k~Iih~~~~~~~~-~~~--~~~l---~~~~~~~l~~a~~~ 102 (133)
T cd03330 68 ARYVIHAATMEEPG-RSS--EESV---RKATRAALALADEL 102 (133)
T ss_pred CCEEEEeCCCCCCC-CCH--HHHH---HHHHHHHHHHHHHc
Confidence 68999999875432 122 1233 33556677766543
No 339
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=34.93 E-value=44 Score=22.22 Aligned_cols=15 Identities=0% Similarity=-0.130 Sum_probs=12.2
Q ss_pred CCCCEEEEcccCCCC
Q 042773 48 EGCKGVFCVATPRTL 62 (91)
Q Consensus 48 ~~~d~V~HlAa~~~~ 62 (91)
.++|++||.||....
T Consensus 79 g~iDiLVnnAgv~d~ 93 (227)
T TIGR02114 79 QEHDILIHSMAVSDY 93 (227)
T ss_pred CCCCEEEECCEeccc
Confidence 468999999997654
No 340
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=32.22 E-value=3.2 Score=27.46 Aligned_cols=55 Identities=13% Similarity=0.172 Sum_probs=37.0
Q ss_pred CCeEEEecCcc-c-c-ccccC-------CCCEEEEcccCCC------CC-C----CcChHHHHHHHHHHHHHHHHHH
Q 042773 31 SRLAYWTPTLF-N-G-RFTVE-------GCKGVFCVATPRT------LE-D----PVGLEKELALPAVQGTLNVLEA 86 (91)
Q Consensus 31 ~~~~~v~~Dl~-~-~-~~~~~-------~~d~V~HlAa~~~------~~-~----~~~~~~~~~~~nv~gt~nlLea 86 (91)
.++-|.-.|++ . + +.++. ..|..+++|+..- .. . .++. +.++++|+.||.|+++.
T Consensus 55 ~~~vf~padvtsekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledf-qrvidvn~~gtfnvirl 130 (260)
T KOG1199|consen 55 GKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDF-QRVIDVNVLGTFNVIRL 130 (260)
T ss_pred CceEEeccccCcHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHh-hheeeeeeeeeeeeeee
Confidence 47888889999 4 3 44442 3699999998741 11 1 1233 35677899999998764
No 341
>PTZ00117 malate dehydrogenase; Provisional
Probab=31.52 E-value=1.8e+02 Score=20.30 Aligned_cols=43 Identities=16% Similarity=0.086 Sum_probs=30.0
Q ss_pred cccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 45 FTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 45 ~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
+.++++|+|+-.|+...-+. .+. .+.+..|..-...+.+...+
T Consensus 69 ~~l~~ADiVVitag~~~~~g-~~r-~dll~~n~~i~~~i~~~i~~ 111 (319)
T PTZ00117 69 EDIKDSDVVVITAGVQRKEE-MTR-EDLLTINGKIMKSVAESVKK 111 (319)
T ss_pred HHhCCCCEEEECCCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHH
Confidence 36789999999998764322 233 46788888777777666654
No 342
>PRK04148 hypothetical protein; Provisional
Probab=29.21 E-value=54 Score=20.29 Aligned_cols=25 Identities=16% Similarity=0.247 Sum_probs=16.6
Q ss_pred CeEEEecCcc-ccccccCCCCEEEEc
Q 042773 32 RLAYWTPTLF-NGRFTVEGCKGVFCV 56 (91)
Q Consensus 32 ~~~~v~~Dl~-~~~~~~~~~d~V~Hl 56 (91)
.+.++.+|+. +.-+.-+++|.|+-+
T Consensus 59 ~~~~v~dDlf~p~~~~y~~a~liysi 84 (134)
T PRK04148 59 GLNAFVDDLFNPNLEIYKNAKLIYSI 84 (134)
T ss_pred CCeEEECcCCCCCHHHHhcCCEEEEe
Confidence 4567888888 653444677877653
No 343
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=28.12 E-value=1.1e+02 Score=24.19 Aligned_cols=13 Identities=38% Similarity=0.657 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHcC
Q 042773 79 GTLNVLEAAKRLG 91 (91)
Q Consensus 79 gt~nlLeaa~~~g 91 (91)
-..|.||||++-|
T Consensus 640 NVdnFLeaCRkiG 652 (722)
T KOG0532|consen 640 NVDNFLEACRKIG 652 (722)
T ss_pred hHHHHHHHHHHcC
Confidence 3468899999865
No 344
>smart00506 A1pp Appr-1"-p processing enzyme. Function determined by Martzen et al. Extended family detected by reciprocal PSI-BLAST searches (unpublished results, and Pehrson & Fuji).
Probab=27.00 E-value=1.4e+02 Score=17.39 Aligned_cols=37 Identities=27% Similarity=0.156 Sum_probs=20.8
Q ss_pred CCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 49 GCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 49 ~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
++.+|+|+.++...... ....+.+ .....++|+.|.+
T Consensus 70 ~~~~Iih~~~p~~~~~~-~~~~~~l---~~~~~~~l~~~~~ 106 (133)
T smart00506 70 PAKYVIHAVGPRASGHS-NEGFELL---ENAYRNCLELAIE 106 (133)
T ss_pred CCCEEEEeCCCCCCCCC-ccHHHHH---HHHHHHHHHHHHH
Confidence 47899999987654211 1211222 3355666666654
No 345
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=26.03 E-value=30 Score=25.18 Aligned_cols=19 Identities=16% Similarity=0.058 Sum_probs=15.5
Q ss_pred ccccCCCCEEEEcccCCCC
Q 042773 44 RFTVEGCKGVFCVATPRTL 62 (91)
Q Consensus 44 ~~~~~~~d~V~HlAa~~~~ 62 (91)
++.....++|+|+++|...
T Consensus 66 ~~~~~~~~VVlncvGPyt~ 84 (382)
T COG3268 66 EAMASRTQVVLNCVGPYTR 84 (382)
T ss_pred HHHHhcceEEEeccccccc
Confidence 5666789999999999754
No 346
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=25.28 E-value=2.4e+02 Score=19.62 Aligned_cols=42 Identities=17% Similarity=0.057 Sum_probs=30.2
Q ss_pred ccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 46 TVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 46 ~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
.++++|+||=+|+...-+. .+. .+.++.|+.-...+.+...+
T Consensus 69 ~l~~aDiViitag~p~~~~-~~r-~dl~~~n~~i~~~~~~~i~~ 110 (309)
T cd05294 69 DVAGSDIVIITAGVPRKEG-MSR-LDLAKKNAKIVKKYAKQIAE 110 (309)
T ss_pred HhCCCCEEEEecCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHH
Confidence 4789999999988754322 232 46788898888888777654
No 347
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=23.50 E-value=2.5e+02 Score=19.23 Aligned_cols=43 Identities=16% Similarity=0.067 Sum_probs=28.6
Q ss_pred cccCCCCEEEEcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHH
Q 042773 45 FTVEGCKGVFCVATPRTLEDPVGLEKELALPAVQGTLNVLEAAKR 89 (91)
Q Consensus 45 ~~~~~~d~V~HlAa~~~~~~~~~~~~~~~~~nv~gt~nlLeaa~~ 89 (91)
+.++++|+||-.++...-+. .+. .+.+..|+.-...+++...+
T Consensus 62 ~~l~dADiVIit~g~p~~~~-~~r-~e~~~~n~~i~~~i~~~i~~ 104 (300)
T cd01339 62 EDIAGSDVVVITAGIPRKPG-MSR-DDLLGTNAKIVKEVAENIKK 104 (300)
T ss_pred HHhCCCCEEEEecCCCCCcC-CCH-HHHHHHHHHHHHHHHHHHHH
Confidence 35789999999988654322 232 35667787777777766554
No 348
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=22.63 E-value=55 Score=19.70 Aligned_cols=46 Identities=7% Similarity=-0.126 Sum_probs=25.6
Q ss_pred eecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCccccccccCCCCEEEEcccCC
Q 042773 3 AAIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLFNGRFTVEGCKGVFCVATPR 60 (91)
Q Consensus 3 ~~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~~~~~~~~~~d~V~HlAa~~ 60 (91)
.+-|+.+|.+.|.+.+ ++ .+++++..+=. ...+..+|.||+..+..
T Consensus 41 i~nRt~~ra~~l~~~~----~~------~~~~~~~~~~~--~~~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 41 IVNRTPERAEALAEEF----GG------VNIEAIPLEDL--EEALQEADIVINATPSG 86 (135)
T ss_dssp EEESSHHHHHHHHHHH----TG------CSEEEEEGGGH--CHHHHTESEEEE-SSTT
T ss_pred EEECCHHHHHHHHHHc----Cc------cccceeeHHHH--HHHHhhCCeEEEecCCC
Confidence 4568888888887776 21 24444432111 33445678888875543
No 349
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=22.52 E-value=47 Score=23.63 Aligned_cols=75 Identities=3% Similarity=-0.204 Sum_probs=43.3
Q ss_pred ecCCCCChhhhhhhhccCCCCCCCCCCCCeEEEecCcc-cc------ccccCC--CCEEEEcccCCC-CC-C-CcChH--
Q 042773 4 AIFPGSDPSHLFCCSYSLAPGTPMCECSRLAYWTPTLF-NG------RFTVEG--CKGVFCVATPRT-LE-D-PVGLE-- 69 (91)
Q Consensus 4 ~vr~~~k~~~l~~~~~~~~~~~~~~~~~~~~~v~~Dl~-~~------~~~~~~--~d~V~HlAa~~~-~~-~-~~~~~-- 69 (91)
..|+++|.+.+...+.+ .+ . -.+.++..|++ ++ .+.+.+ +.++++-++... .| + .+.|.
T Consensus 79 IsRt~~KL~~v~kEI~~--~~-~----vev~~i~~Dft~~~~~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~ 151 (312)
T KOG1014|consen 79 ISRTQEKLEAVAKEIEE--KY-K----VEVRIIAIDFTKGDEVYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGE 151 (312)
T ss_pred EeCCHHHHHHHHHHHHH--Hh-C----cEEEEEEEecCCCchhHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhh
Confidence 46889988777776532 11 0 24667889998 44 223333 568889888864 22 2 23332
Q ss_pred -HHHHHHHHHHHHHHHH
Q 042773 70 -KELALPAVQGTLNVLE 85 (91)
Q Consensus 70 -~~~~~~nv~gt~nlLe 85 (91)
..++.+|+.++..+.+
T Consensus 152 ~~~ii~vN~~~~~~~t~ 168 (312)
T KOG1014|consen 152 LQNIINVNILSVTLLTQ 168 (312)
T ss_pred hhheeEEecchHHHHHH
Confidence 2345557666555443
No 350
>cd03331 Macro_Poa1p_like_SNF2 Macro domain, Poa1p_like family, SNF2 subfamily. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. Members of this subfamily contain a C-terminal macro domain that show similarity to the yeast protein Poa1p, reported to be a phosphatase specific for Appr-1"-p, a tRNA splicing metabolite. In addition, they also contain an SNF2 domain, defined by the presence of seven
Probab=22.25 E-value=1.1e+02 Score=19.27 Aligned_cols=24 Identities=4% Similarity=-0.104 Sum_probs=16.3
Q ss_pred eEEEecCcc-cc-ccccCCCCEEEEccc
Q 042773 33 LAYWTPTLF-NG-RFTVEGCKGVFCVAT 58 (91)
Q Consensus 33 ~~~v~~Dl~-~~-~~~~~~~d~V~HlAa 58 (91)
++|+.+|++ +. .. .+..+|+|.--
T Consensus 2 I~yv~GD~~~p~~~~--~~~~iI~H~cN 27 (152)
T cd03331 2 VRYVYGDVTHPSAVC--AEDAIIVHCVD 27 (152)
T ss_pred eEEEeCccCCCCccC--CCCeEEEEEEC
Confidence 678999999 54 21 23568888743
No 351
>COG0293 FtsJ 23S rRNA methylase [Translation, ribosomal structure and biogenesis]
Probab=21.41 E-value=2.6e+02 Score=18.64 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=23.8
Q ss_pred CCCCeEEEecCcc-cc--c---cccCC--CCEEEEcccCCC
Q 042773 29 ECSRLAYWTPTLF-NG--R---FTVEG--CKGVFCVATPRT 61 (91)
Q Consensus 29 ~~~~~~~v~~Dl~-~~--~---~~~~~--~d~V~HlAa~~~ 61 (91)
.++++.++++|++ +. . +.+.+ +|.|++=++|..
T Consensus 83 ~~~~V~~iq~d~~~~~~~~~l~~~l~~~~~DvV~sD~ap~~ 123 (205)
T COG0293 83 PIPGVIFLQGDITDEDTLEKLLEALGGAPVDVVLSDMAPNT 123 (205)
T ss_pred cCCCceEEeeeccCccHHHHHHHHcCCCCcceEEecCCCCc
Confidence 4578999999999 66 2 23333 599998777743
No 352
>cd06395 PB1_Map2k5 PB1 domain is essential part of the mitogen-activated protein kinase kinase 5 (Map2k5, alias MEK5) one of the key member of the signaling kinases cascade which involved in angiogenesis and early cardiovascular development. The PB1 domain of Map2k5 interacts with the PB1 domain of another members of kinase cascade MEKK2 (or MEKK3). A canonical PB1-PB1 interaction, involving heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The Map2k5 protein contains a type I PB1 domain.
Probab=20.55 E-value=37 Score=19.45 Aligned_cols=15 Identities=0% Similarity=0.118 Sum_probs=10.1
Q ss_pred eeecCCCCChhhhhh
Q 042773 2 NAAIFPGSDPSHLFC 16 (91)
Q Consensus 2 ~~~vr~~~k~~~l~~ 16 (91)
|.||||.+.-+.+.+
T Consensus 53 RITVRSDeEm~AMls 67 (91)
T cd06395 53 RITVRSDEEMKAMLS 67 (91)
T ss_pred eeEecchHHHHHHHH
Confidence 789999875444433
No 353
>PF06162 DUF976: Caenorhabditis elegans protein of unknown function (DUF976); InterPro: IPR010381 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=20.07 E-value=68 Score=20.73 Aligned_cols=12 Identities=17% Similarity=-0.034 Sum_probs=10.0
Q ss_pred CCCEEEEcccCC
Q 042773 49 GCKGVFCVATPR 60 (91)
Q Consensus 49 ~~d~V~HlAa~~ 60 (91)
..|.|||||+.+
T Consensus 81 ~~~~viHL~~Hs 92 (166)
T PF06162_consen 81 QPDFVIHLASHS 92 (166)
T ss_pred CCCeEEEecCCC
Confidence 369999999875
Done!