Query 042775
Match_columns 224
No_of_seqs 283 out of 1198
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 09:19:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042775.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042775hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2335 Secreted and surface p 99.9 5.6E-26 1.2E-30 189.2 9.3 134 6-156 47-185 (187)
2 PF02469 Fasciclin: Fasciclin 99.9 4.7E-23 1E-27 160.5 6.4 124 17-152 1-128 (128)
3 smart00554 FAS1 Four repeated 99.8 2.3E-20 5.1E-25 139.8 5.6 95 47-153 1-99 (99)
4 KOG1437 Fasciclin and related 99.2 1.2E-11 2.7E-16 120.6 5.7 131 5-152 372-507 (682)
5 KOG1437 Fasciclin and related 99.1 4.8E-10 1E-14 109.6 9.8 131 7-156 508-645 (682)
6 PF04625 DEC-1_N: DEC-1 protei 31.1 60 0.0013 30.0 3.6 11 153-163 100-110 (407)
7 cd03035 ArsC_Yffb Arsenate Red 30.2 90 0.002 23.5 4.0 57 9-79 28-84 (105)
8 PF06679 DUF1180: Protein of u 28.8 1.4E+02 0.003 24.8 5.2 8 211-218 100-107 (163)
9 cd03033 ArsC_15kD Arsenate Red 19.7 2E+02 0.0044 21.9 4.3 56 9-79 29-84 (113)
10 COG3603 Uncharacterized conser 19.6 2.6E+02 0.0055 22.3 4.7 72 76-155 5-76 (128)
No 1
>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]
Probab=99.93 E-value=5.6e-26 Score=189.21 Aligned_cols=134 Identities=24% Similarity=0.435 Sum_probs=115.7
Q ss_pred cccHHHHHHhCCChHHHHHHHHHCCCHHHHHhhhcCCCCCeEEEecCcHHHhcCCccccCCCC----HHHHHHHhhhccc
Q 042775 6 PTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLS----DPQKELLIQFHVL 81 (224)
Q Consensus 6 ~~ni~~iL~~~~~fStf~~lL~~t~l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~~~~l~~L~----~~~l~~lL~yHVv 81 (224)
..+|.+...++++|++|..+++.++|.++|++ .|.||||||||+||++|+.++++.|. .+.+..+|.|||+
T Consensus 47 ~~~iV~~a~~~~~f~tl~~a~~aa~Lv~~L~~-----~gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYHVv 121 (187)
T COG2335 47 RADIVESAANNPSFTTLVAALKAAGLVDTLNE-----TGPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYHVV 121 (187)
T ss_pred hhHHHHHHccCcchHHHHHHHHhhhhHHHhcC-----CCCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEEEE
Confidence 46788888899999999999999999999998 89999999999999999999998873 2457889999999
Q ss_pred CCccCccccccCCCceecCCCCCCCceeeEEEEecCCEEEEeeCceeeE-EeeeeeecCCeEEEEECccccCCCCC
Q 042775 82 SSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTS-VSSIVYSDGQLAVYQVDKVLLPWSIF 156 (224)
Q Consensus 82 p~~~s~~~l~~~s~~v~Tlag~~~~g~~~l~V~~~g~~V~v~tg~~~a~-I~~~v~~~ng~vIh~ID~VLlP~~l~ 156 (224)
++.+..+++.. .+.++|+.|. .++|...++.++|+ +++ +..++..+|| +||+||+||+|+...
T Consensus 122 ~Gk~~~~~l~~-~~~v~t~~G~------~~~i~~~~~~~~Vn----~a~v~~~di~a~Ng-vIhvID~Vl~Pp~~~ 185 (187)
T COG2335 122 EGKITAADLKS-SGSVKTVQGA------DLKIKVTGGGVYVN----DATVTIADINASNG-VIHVIDKVLIPPMDL 185 (187)
T ss_pred cCcccHHHhhc-cccceeecCc------eEEEEEcCCcEEEe----eeEEEeccEeccCc-EEEEEeeeccCCCcc
Confidence 99999999986 3679999987 56666666669986 345 4579999998 999999999998753
No 2
>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues. It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.
Probab=99.88 E-value=4.7e-23 Score=160.47 Aligned_cols=124 Identities=27% Similarity=0.448 Sum_probs=93.3
Q ss_pred CChHHHHHHHHHCCCHHHHHhhhcCCCCCeEEEecCcHHHhcCCccccCCC--CHHHHHHHhhhcccCCccCccccccCC
Q 042775 17 GHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTL--SDPQKELLIQFHVLSSYIPPTRFQTLR 94 (224)
Q Consensus 17 ~~fStf~~lL~~t~l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~~~~l~~L--~~~~l~~lL~yHVvp~~~s~~~l~~~s 94 (224)
|+||+|.++|+.+|+.+.|++ +.+.+|||||+|+||++++.+..+.+ ..+.+.++|+|||+++.++.++|....
T Consensus 1 ~~~s~f~~~l~~~~l~~~l~~----~~~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~~~ 76 (128)
T PF02469_consen 1 PDLSTFSRLLEQAGLADLLND----SDGNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLRNGK 76 (128)
T ss_dssp -TTHHHHHHHHHTTCHHHHGC----SSSSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHHCHH
T ss_pred CCHHHHHHHHHHcCCHHHHhc----CCCCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhcccc
Confidence 579999999999999999942 26899999999999999865444444 457789999999999999999998642
Q ss_pred Cceec-CCCCCCCceeeEEEEecCCEEEEeeCceeeEEe-eeeeecCCeEEEEECccccC
Q 042775 95 NPLRT-NAGTNSRYEYPLNVTSSGNSVNISTGITNTSVS-SIVYSDGQLAVYQVDKVLLP 152 (224)
Q Consensus 95 ~~v~T-lag~~~~g~~~l~V~~~g~~V~v~tg~~~a~I~-~~v~~~ng~vIh~ID~VLlP 152 (224)
..++| +.|. .+.++....++.++|++ .++|. .++...|| +||+||+||+|
T Consensus 77 ~~~~t~~~g~----~~~v~~~~~~~~~~v~~---~a~i~~~~~~~~nG-~ih~id~vL~P 128 (128)
T PF02469_consen 77 QTLETLLNGQ----PLRVSSSPSNGTIYVNG---KARIVKSDIEASNG-VIHIIDDVLIP 128 (128)
T ss_dssp EEEEBSSTTC----EEEEEEEGGTTEEEECC---EEEESEEEEEESSE-EEEEESS-TSS
T ss_pred ccceeccCCC----EEEEEEEecCCceEecC---ceEEEeCCEEeCCE-EEEEECceECc
Confidence 36888 5554 44444443378899875 46765 68888887 99999999998
No 3
>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
Probab=99.81 E-value=2.3e-20 Score=139.82 Aligned_cols=95 Identities=36% Similarity=0.536 Sum_probs=77.6
Q ss_pred EEEecCcHHHhcCCccccCCCCHH-HHHHHhhhcccCCccCccccccCCCceecCCCCCCCceeeEEEEecC--CEEEEe
Q 042775 47 TVFAPTDNAFSGLSSGTLNTLSDP-QKELLIQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSG--NSVNIS 123 (224)
Q Consensus 47 TvFAPtD~AF~~l~~~~l~~L~~~-~l~~lL~yHVvp~~~s~~~l~~~s~~v~Tlag~~~~g~~~l~V~~~g--~~V~v~ 123 (224)
|||||+|+||+++....++.|..+ .++++|+|||++++++.++|.. ...++|+.|. .+.++..+ +.+.++
T Consensus 1 TvfaP~d~Af~~~~~~~~~~l~~~~~l~~ll~~Hiv~~~~~~~~l~~-~~~~~Tl~g~------~l~v~~~~~~~~i~in 73 (99)
T smart00554 1 TVFAPTDEAFQKLPPGTLNSLLADPKLKNLLLYHVVPGRLSSADLLN-GGTLPTLAGS------KLRVTRSGDSGTVTVN 73 (99)
T ss_pred CEeCcCHHHHHhcCHHHHHHHhCCHHHHHHHHhcEeCceEcHHHhcc-CCccccCCCC------EEEEEEeCCCCeEEEc
Confidence 899999999999987656666533 8899999999999999999986 3578999875 56666655 678886
Q ss_pred eCceeeEE-eeeeeecCCeEEEEECccccCC
Q 042775 124 TGITNTSV-SSIVYSDGQLAVYQVDKVLLPW 153 (224)
Q Consensus 124 tg~~~a~I-~~~v~~~ng~vIh~ID~VLlP~ 153 (224)
+ ++| ..++..+|| +||+||+||+|+
T Consensus 74 ~----~~v~~~di~~~nG-vih~Id~vL~P~ 99 (99)
T smart00554 74 G----ARIVEADIAATNG-VVHVIDRVLLPP 99 (99)
T ss_pred c----eEEEECCEecCCe-EEEEECceeCCC
Confidence 3 455 468999887 999999999995
No 4
>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=99.21 E-value=1.2e-11 Score=120.58 Aligned_cols=131 Identities=18% Similarity=0.242 Sum_probs=100.1
Q ss_pred CcccHHHHHHhCCChHHHHHHHHHCCCHHHHHhhhcCCCCCeEEEecCcHHHhcCCccccCCCCHHHHHHHhhhcccCCc
Q 042775 5 GPTNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLSDPQKELLIQFHVLSSY 84 (224)
Q Consensus 5 ~~~ni~~iL~~~~~fStf~~lL~~t~l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~~~~l~~L~~~~l~~lL~yHVvp~~ 84 (224)
...+++++..++. .+++.|++.+-++.+.|.. ++.+|+|+|+|++|+.+.+...+ ...++||+|||++.+
T Consensus 372 ~~~~l~~La~e~~-~st~~rlv~elgll~~L~~-----n~e~t~~lp~n~~fd~~~~~~~r----~l~~qIL~~HII~~~ 441 (682)
T KOG1437|consen 372 SLKNLMSLAREDE-ISTSMRLVAELGLLTALAP-----NDEATLLLPTNNLFDDLTPLESR----RLAEQILYNHIIPEY 441 (682)
T ss_pred hHHHHHHHHhccc-ccHHHHHHHhccceEEEcC-----CCceEEeeehhhhccCCChhhhH----HHHHHHHHHhCcchh
Confidence 3578888888766 5999999999999887776 56699999999999997553222 237899999999999
Q ss_pred cCccccccCCCceecCCCCCCCceeeEEEEecC-----CEEEEeeCceeeEEeeeeeecCCeEEEEECccccC
Q 042775 85 IPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSG-----NSVNISTGITNTSVSSIVYSDGQLAVYQVDKVLLP 152 (224)
Q Consensus 85 ~s~~~l~~~s~~v~Tlag~~~~g~~~l~V~~~g-----~~V~v~tg~~~a~I~~~v~~~ng~vIh~ID~VLlP 152 (224)
.+.++...++..++|+.+. ++..-+.+.- ..+.+++ ..+.+.+|+...|| +||.||+||.|
T Consensus 442 ~~~~~~y~~~~~v~t~g~~----~l~~fv~r~~~s~~~t~i~~~~--~~~Ii~aDi~~~nG-vvH~id~vl~p 507 (682)
T KOG1437|consen 442 LTSSSMYNGQTTVRTLGKN----KLLYFVYRHSVSANVTDILIGN--EACIIEADISVKNG-VVHIIDRVLDP 507 (682)
T ss_pred hhhhhhhcccceeeccCCe----EEEEEEecccccccceeeeccc--eeeEEecccceecC-ceEEeeEEcCc
Confidence 9999998776688888775 4444444322 1233332 33345689999998 99999999999
No 5
>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=99.08 E-value=4.8e-10 Score=109.62 Aligned_cols=131 Identities=17% Similarity=0.236 Sum_probs=91.7
Q ss_pred ccHHHHHHhCCChHHHHHHHHHCCCHHHHHhhhcCCCCCeEEEecCcHHHhcCCccccCCCC-HHHHHHHhhhcccCCcc
Q 042775 7 TNFTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLS-DPQKELLIQFHVLSSYI 85 (224)
Q Consensus 7 ~ni~~iL~~~~~fStf~~lL~~t~l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~~~~l~~L~-~~~l~~lL~yHVvp~~~ 85 (224)
.++.+.|++++++|.|.++++..++.++|.. .+.||+|+|||+||.+...+... +. ...+..+++||++++..
T Consensus 508 ~~l~~~l~~d~r~s~~~~~le~~~l~e~l~~-----~~~~t~fvPt~ka~~~~~~~~~~-~~~~~~l~~~l~yH~v~~~~ 581 (682)
T KOG1437|consen 508 VSLMEDLKTDGRISGTVQGLEGVLLPEELTP-----EGNYTLFVPTNKAWQKSTKDEKS-LFHKKALQDFLKYHLVPGQS 581 (682)
T ss_pred ccHHHHHhhccchhhhHHhhhhcCChhhhcc-----CCceEEEeecccccccCCcchhh-cchHHHHHHHHHhcccccee
Confidence 7899999999999999999999999999966 89999999999999998664332 44 46689999999999866
Q ss_pred CccccccCCCceecCCCCCCCceeeEEEEecCCEEEEe----eCcee-eEE-eeeeeecCCeEEEEECccccCCCCC
Q 042775 86 PPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNIS----TGITN-TSV-SSIVYSDGQLAVYQVDKVLLPWSIF 156 (224)
Q Consensus 86 s~~~l~~~s~~v~Tlag~~~~g~~~l~V~~~g~~V~v~----tg~~~-a~I-~~~v~~~ng~vIh~ID~VLlP~~l~ 156 (224)
. |.-.+.+..+.. +.++. .++.+.+. +|..+ .++ ..++...|| ++|+||.||.|++++
T Consensus 582 ~---ls~~~~~~v~~~-------~k~s~--~~~~~~~~~~~~~~~vn~e~~~~~~i~~~n~-~~h~i~~vl~p~~l~ 645 (682)
T KOG1437|consen 582 R---LSLGSSPYVMIQ-------VKLSL--RGDHLFFSLVNPRGDVNKERLVGIDIMGTNG-VVHVIDLVLKPPDLP 645 (682)
T ss_pred e---eecccccceeee-------eeEEE--ecccEEeeeeccccceeeeeeeccceeeecc-eeEEEEEEcccCcch
Confidence 4 211111111110 12222 22222221 12222 233 368888897 999999999998654
No 6
>PF04625 DEC-1_N: DEC-1 protein, N-terminal region; InterPro: IPR006719 The defective chorion-1 gene (dec-1) in Drosophila encodes follicle cell proteins necessary for proper eggshell assembly. Multiple products of the dec-1 gene are formed by alternative RNA splicing and proteolytic processing []. Cleavage products include S80 (80 kDa) which is incorporated into the eggshell, and further proteolysis of S80 gives S60 (60 kDa). This domain is present at the N-terminal of these proteins.; GO: 0005213 structural constituent of chorion, 0007304 chorion-containing eggshell formation, 0005576 extracellular region, 0042600 chorion
Probab=31.05 E-value=60 Score=30.04 Aligned_cols=11 Identities=18% Similarity=0.304 Sum_probs=5.2
Q ss_pred CCCCCCCCCCC
Q 042775 153 WSIFGAKPPAM 163 (224)
Q Consensus 153 ~~l~~~~~pap 163 (224)
++++|..+|.|
T Consensus 100 ~g~LGQaaPvP 110 (407)
T PF04625_consen 100 PGFLGQAAPVP 110 (407)
T ss_pred ccccccCCCCC
Confidence 34555444443
No 7
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=30.23 E-value=90 Score=23.46 Aligned_cols=57 Identities=12% Similarity=0.113 Sum_probs=36.1
Q ss_pred HHHHHHhCCChHHHHHHHHHCCCHHHHHhhhcCCCCCeEEEecCcHHHhcCCccccCCCCHHHHHHHhhhc
Q 042775 9 FTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLSDPQKELLIQFH 79 (224)
Q Consensus 9 i~~iL~~~~~fStf~~lL~~t~l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~~~~l~~L~~~~l~~lL~yH 79 (224)
+.++++..+.-..+.++++..|+.+.++. ....|..+.....+.++++++.++|.-|
T Consensus 28 ~~di~~~p~s~~eL~~~l~~~g~~~li~~--------------~~~~yk~l~l~~~~~~s~~e~~~~l~~~ 84 (105)
T cd03035 28 FHDYRKDGLDAATLERWLAKVGWETLLNK--------------RGTTWRKLDDAQKAALDAAKAIALMLEH 84 (105)
T ss_pred EEecccCCCCHHHHHHHHHHhChHHHHcc--------------CchHHHhCChhhhccCCHHHHHHHHHhC
Confidence 34455666677888888888887666655 2356676654323456767766666554
No 8
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=28.83 E-value=1.4e+02 Score=24.78 Aligned_cols=8 Identities=38% Similarity=0.538 Sum_probs=3.4
Q ss_pred hhhHHHHH
Q 042775 211 FLFGASMV 218 (224)
Q Consensus 211 ~~~~~~~~ 218 (224)
|+.|+..+
T Consensus 100 Vl~g~s~l 107 (163)
T PF06679_consen 100 VLVGLSAL 107 (163)
T ss_pred HHHHHHHH
Confidence 44444433
No 9
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=19.66 E-value=2e+02 Score=21.89 Aligned_cols=56 Identities=7% Similarity=-0.006 Sum_probs=35.6
Q ss_pred HHHHHHhCCChHHHHHHHHHCCCHHHHHhhhcCCCCCeEEEecCcHHHhcCCccccCCCCHHHHHHHhhhc
Q 042775 9 FTKILEKVGHFSFFIRLLKATTVRDQIERQLNDTNSGVTVFAPTDNAFSGLSSGTLNTLSDPQKELLIQFH 79 (224)
Q Consensus 9 i~~iL~~~~~fStf~~lL~~t~l~~~L~~~l~~~~~~~TvFAPtD~AF~~l~~~~l~~L~~~~l~~lL~yH 79 (224)
+.++++..+....+.++|+..|+...++. ...+|..+... .+.++++++.++|.-|
T Consensus 29 ~~d~~~~p~s~~eL~~~l~~~g~~~l~n~--------------~~~~~r~~~~~-~~~ls~~e~~~ll~~~ 84 (113)
T cd03033 29 VRDLLTEPWTAETLRPFFGDLPVAEWFNP--------------AAPRVKSGEVV-PEALDEEEALALMIAD 84 (113)
T ss_pred EeehhcCCCCHHHHHHHHHHcCHHHHHhc--------------ccHHHHhcCCC-ccCCCHHHHHHHHHhC
Confidence 44566677778888888888887776665 23445554332 2566766666666554
No 10
>COG3603 Uncharacterized conserved protein [Function unknown]
Probab=19.65 E-value=2.6e+02 Score=22.28 Aligned_cols=72 Identities=10% Similarity=0.157 Sum_probs=48.2
Q ss_pred hhhcccCCccCccccccCCCceecCCCCCCCceeeEEEEecCCEEEEeeCceeeEEeeeeeecCCeEEEEECccccCCCC
Q 042775 76 IQFHVLSSYIPPTRFQTLRNPLRTNAGTNSRYEYPLNVTSSGNSVNISTGITNTSVSSIVYSDGQLAVYQVDKVLLPWSI 155 (224)
Q Consensus 76 L~yHVvp~~~s~~~l~~~s~~v~Tlag~~~~g~~~l~V~~~g~~V~v~tg~~~a~I~~~v~~~ng~vIh~ID~VLlP~~l 155 (224)
|+.-++++.|....+..+ ..+++.+.++. ..+|++..+...|..-. .+|-+.|+.+.|-.+..++.++ +-++
T Consensus 5 l~l~~l~g~y~I~Rl~~~-~~ip~wa~~~~----F~sIt~t~eelsivc~~--~~vp~~V~~~~GW~~lk~~gpf-~Fgl 76 (128)
T COG3603 5 LKLSILNGEYAICRLDAG-SAIPAWADGPG----FWSITRTPEELSIVCLA--DRVPDVVQIEKGWSCLKFEGPF-DFGL 76 (128)
T ss_pred eeEEEeCceEEEEEcccC-CcCccccCCCc----eEEEEcCCceEEEEeec--ccCCcceEecCCeEEEEEeccc-cCCc
Confidence 445567777766666544 34677776532 57888877777765421 3566788888888999999875 4343
Done!