BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042784
(356 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 231 bits (589), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 132/346 (38%), Positives = 194/346 (56%), Gaps = 9/346 (2%)
Query: 9 ETVESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATM 68
E V +K+ + Y + G P +++++ ++ L + + V V+ L++S DPY+R+ M
Sbjct: 3 EEVSNKQVILKNYVT-GYPKESDMEIKNVTIKLKVPE-GSNDVVVKNLYLSCDPYMRSRM 60
Query: 69 TGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVLRAFLPVAEYSLL-PCDLLT 127
+G Y F I +G+A+V+ S D K+ GD+V EYS++ P L
Sbjct: 61 RKI-EGSYVESFAPGSPITGYGVAKVLESGDPKFQKGDLVW-GMTGWEEYSIITPTQTLF 118
Query: 128 RKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKL 187
+ D +P Y LG+PG A+ G + PK G VFVSAA+G VG GQ AK+
Sbjct: 119 KIHD--KDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKM 176
Query: 188 KGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKML 247
GC VVGS GS + V LLK +FG+D+AFNY E AAL +YFP+GID+Y +NVGGKML
Sbjct: 177 LGCYVVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKML 236
Query: 248 EAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADF 307
+AVL ++ ++ RI +CGMISQYN TE GV NL +I K ++MEGF++ + + +
Sbjct: 237 DAVLVNMKLYGRIAVCGMISQYNLEQTE--GVHNLFCLITKRIRMEGFLVFDYYHLYPKY 294
Query: 308 TVEMESYIKEGKIRSKHVIYYGVXXXXXXXXXXXXXXNIGKVVIQV 353
+ IK GK+ + +G+ NIGK V+ V
Sbjct: 295 LEMVIPQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMV 340
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 223 bits (567), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/353 (38%), Positives = 194/353 (54%), Gaps = 21/353 (5%)
Query: 10 TVESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPD--HHVAVETLWISIDPYLRAT 67
T +K+ + Y S G PT + +V L +P+ + V V+ L++S DPY+R
Sbjct: 2 TATNKQVILKDYVS-GFPTESDFDFTTTTVEL---RVPEGTNSVLVKNLYLSCDPYMRIR 57
Query: 68 M------TGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVLRAFLPVAEYSLL 121
M T Y P Q I +G++R+I S Y GD+ L + EYS++
Sbjct: 58 MGKPDPSTAALAQAYTP----GQPIQGYGVSRIIESGHPDYKKGDL-LWGIVAWEEYSVI 112
Query: 122 -PCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMF 180
P K+ + +P Y LG+PG A+ G + PK G V+VSAA+G VG
Sbjct: 113 TPMTHAHFKIQ-HTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQL 171
Query: 181 AGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLD 240
GQLAK+ GC VVGS GS + V LLK +FG+DDAFNY E AAL + FPNGID+Y +
Sbjct: 172 VGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFE 231
Query: 241 NVGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSH 300
NVGGKML+AVL ++N+H RI +CGMISQYN ++GV NL N+I K +++GF++
Sbjct: 232 NVGGKMLDAVLVNMNMHGRIAVCGMISQYN--LENQEGVHNLSNIIYKRNRIQGFVVSDF 289
Query: 301 MDRFADFTVEMESYIKEGKIRSKHVIYYGVXXXXXXXXXXXXXXNIGKVVIQV 353
D+++ F + +I+EGKI + G+ N+GK V+ V
Sbjct: 290 YDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVV 342
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 182/345 (52%), Gaps = 13/345 (3%)
Query: 10 TVESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMT 69
T + Y A G+P D V + + + V+ ++S+DP +R M
Sbjct: 4 TSQINRQYQLAQRPSGLPGRDTFSF----VETPLGEPAEGQILVKNEYLSLDPAMRGWMN 59
Query: 70 GTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVLRAFLPVAEYSL-LPCDLLTR 128
Y P + +V+ A G+ +V+ SK + GD V A L V +Y + P
Sbjct: 60 DARS--YIPPVGIGEVMRALGVGKVLVSKHPGFQAGDYVNGA-LGVQDYFIGEPKGFY-- 114
Query: 129 KLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLK 188
K+DP S P P YLS+LG+ G A+ + +GQPK+G V +S AAG VG AGQ+A+LK
Sbjct: 115 KVDP-SRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLK 173
Query: 189 GCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLE 248
GC+VVG G + + L EE G+D A +Y +E A L + P GIDV+ DNVGG++L+
Sbjct: 174 GCRVVGIAGGAEKCRFLVEELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILD 232
Query: 249 AVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFT 308
VL + ARI+LCG ISQYN R G N L+++ +MEG ++ + RF +
Sbjct: 233 TVLTRIAFKARIVLCGAISQYNNKEAVR-GPANYLSLLVNRARMEGMVVMDYAQRFPEGL 291
Query: 309 VEMESYIKEGKIRSKHVIYYGVXXXXXXXXXXXXXXNIGKVVIQV 353
EM +++ EGK++S+ I G+ N GK+V++V
Sbjct: 292 KEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV 336
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 173/341 (50%), Gaps = 11/341 (3%)
Query: 19 SAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFP 78
S +G P +++ ++ + D+I + V V TL++S+DPY+R M Y
Sbjct: 16 SRPGKNGNPVAENFRMEEVYLP---DNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYIT 72
Query: 79 QFNLNQVILAFGIARVIRSKDSKYSDGDIVLRAFLPVAEYSLLPCDLLTRKLDPASGIPF 138
+ L+QV+ GI + SK + + GD V + P +L + L K+DP
Sbjct: 73 PWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSL-EKVDPQLVDGH 131
Query: 139 PDY-LSSLGIPGFAAWVGIEVLGQPKSGSN--VFVSAAAGGVGMFAGQLAKLKGC-KVVG 194
Y L ++G+PG + +GI+ G +GSN + VS AAG G AGQ+ GC +VVG
Sbjct: 132 LSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVG 191
Query: 195 STGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHV 254
G+ + LL E G+D A NY + + L + P G+DVY DNVGG + + V++ +
Sbjct: 192 ICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQM 250
Query: 255 NVHARIILCGMISQYNKVWTERDGVRNLLNMIGKE--VKMEGFMIGSHMDRFADFTVEME 312
N ++ IILCG ISQYNK + + I KE + E F++ ++ D+F +++
Sbjct: 251 NENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLS 310
Query: 313 SYIKEGKIRSKHVIYYGVXXXXXXXXXXXXXXNIGKVVIQV 353
+ KEGK++ K + G+ NIGK ++ +
Sbjct: 311 QWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCI 351
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 173/341 (50%), Gaps = 11/341 (3%)
Query: 19 SAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFP 78
S +G P +++ ++ + D+I + V V TL++S+DPY+R M Y
Sbjct: 11 SRPGKNGNPVAENFRMEEVYLP---DNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYIT 67
Query: 79 QFNLNQVILAFGIARVIRSKDSKYSDGDIVLRAFLPVAEYSLLPCDLLTRKLDPASGIPF 138
+ L+QV+ GI + SK + + GD V + P +L + L K+DP
Sbjct: 68 PWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSL-EKVDPQLVDGH 126
Query: 139 PDY-LSSLGIPGFAAWVGIEVLGQPKSGSN--VFVSAAAGGVGMFAGQLAKLKGC-KVVG 194
Y L ++G+PG + +GI+ G +GSN + VS AAG G AGQ+ GC +VVG
Sbjct: 127 LSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVG 186
Query: 195 STGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHV 254
G+ + LL E G+D A NY + + L + P G+DVY DNVGG + + V++ +
Sbjct: 187 ICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQM 245
Query: 255 NVHARIILCGMISQYNKVWTERDGVRNLLNMIGKE--VKMEGFMIGSHMDRFADFTVEME 312
N ++ IILCG ISQYNK + + I KE + E F++ ++ D+F +++
Sbjct: 246 NENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLS 305
Query: 313 SYIKEGKIRSKHVIYYGVXXXXXXXXXXXXXXNIGKVVIQV 353
+ KEGK++ K + G+ NIGK ++ +
Sbjct: 306 QWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCI 346
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 174/342 (50%), Gaps = 17/342 (4%)
Query: 11 VESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTG 70
V++K W + + G PT +L++ + + + + V +E L++S+DPY+R
Sbjct: 6 VKAKSWTLKKHF-QGKPTQSDFELKT----VELPPLKNGEVLLEALFLSVDPYMRIASKR 60
Query: 71 TNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVLRAFLPVAEYSLLPCDLLTRKL 130
+G V++ +ARV+ SK+S + G IVL + L
Sbjct: 61 LKEG---------AVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLT 111
Query: 131 DPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC 190
+ +P L ++G+PG A+ G+ + K G V VSAAAG VG GQ+AKLKGC
Sbjct: 112 EWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC 171
Query: 191 KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAV 250
KVVG+ GSD+ + LK + G+D AFNY + S + AL K P+G D Y DNVGG+ L V
Sbjct: 172 KVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTV 230
Query: 251 LNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTV- 309
L+ + +I +CG IS YN++ G + ++I K++++EGF++ + +
Sbjct: 231 LSQMKDFGKIAICGAISVYNRMDQLPPG-PSPESIIYKQLRIEGFIVYRWQGDVREKALR 289
Query: 310 EMESYIKEGKIRSKHVIYYGVXXXXXXXXXXXXXXNIGKVVI 351
++ ++ EGKI+ + G N+GK V+
Sbjct: 290 DLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 331
>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent
Oxidoreductase From Mus Musculus At 2.10 A Resolution
Length = 363
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 169/338 (50%), Gaps = 11/338 (3%)
Query: 22 ASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFN 81
+G P +++ ++ S+ +D++ + V V TL++S+DPY R Y +
Sbjct: 25 GKNGNPVAENFRVEEFSL---LDALNEGQVQVRTLYLSVDPYXRCKXNEDTGTDYLAPWQ 81
Query: 82 LNQVILAFGIARVIRSKDSKYSDGDIVLRAFLPVAEYSLLPCDLLTRKLDPASGIPFPDY 141
L QV GI V SK K + GD V + P ++L + L K+DP Y
Sbjct: 82 LAQVADGGGIGIVEESKHQKLAKGDFVTSFYWPWQTKAILDGNGL-EKVDPQLVDGHLSY 140
Query: 142 -LSSLGIPGFAAWVGIEVLGQPKSGSN--VFVSAAAGGVGMFAGQLAKLKGC-KVVGSTG 197
L ++G PG + +G++ G +GSN VS AAG G AGQ+ L GC +VVG G
Sbjct: 141 FLGAIGXPGLTSLIGVQEKGHISAGSNQTXVVSGAAGACGSLAGQIGHLLGCSRVVGICG 200
Query: 198 SDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVH 257
+ + L E G+D A NY + + L + P G+DVY DNVGG + V++ N +
Sbjct: 201 TQEKCLFLTSELGFDAAVNYKT-GNVAEQLREACPGGVDVYFDNVGGDISNTVISQXNEN 259
Query: 258 ARIILCGMISQYNKVWTERDGVRNLLNMIGKE--VKMEGFMIGSHMDRFADFTVEMESYI 315
+ IILCG ISQYNK + + I KE + E F + ++ D+F +++ +
Sbjct: 260 SHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWF 319
Query: 316 KEGKIRSKHVIYYGVXXXXXXXXXXXXXXNIGKVVIQV 353
KEGK++ K + G+ N+GK ++ +
Sbjct: 320 KEGKLKVKETVAKGLENXGVAFQSXXTGGNVGKQIVCI 357
>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph
Length = 353
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 164/319 (51%), Gaps = 14/319 (4%)
Query: 44 DSIPDHHVAVETLWISIDPYLRATM---TGTNDGLYFPQFNLNQVILAFGIARVIRSKDS 100
D++ + V V TL++S+DPY+R M TGT+ Y + L QV GI V SK
Sbjct: 34 DALNEGQVQVRTLYLSVDPYMRCKMNEDTGTD---YLAPWQLAQVADGGGIGVVEESKHQ 90
Query: 101 KYSDGDIVLRAFLPVAEYSLLPCDLLTRKLDPASGIPFPDY-LSSLGIPGFAAWVGIEVL 159
K + GD V + P ++L + L K+DP Y L ++G+PG + +G++
Sbjct: 91 KLTKGDFVTSFYWPWQTKAILDGNGL-EKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEK 149
Query: 160 GQPKSGSN--VFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFN 216
G +GSN + VS AAG G AGQ+ L GC +VVG G+ + L E G+D A N
Sbjct: 150 GHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVN 209
Query: 217 YNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMISQYNKVWTER 276
Y + + L + P G+DVY DNVGG + AV++ +N ++ IILCG ISQY+
Sbjct: 210 YKTG-NVAEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDVPYP 268
Query: 277 DGVRNLLNMIGKE--VKMEGFMIGSHMDRFADFTVEMESYIKEGKIRSKHVIYYGVXXXX 334
+ + I KE + E F + ++ D+F +++ + KEGK++ K + G+
Sbjct: 269 PPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWFKEGKLKVKETMAKGLENMG 328
Query: 335 XXXXXXXXXXNIGKVVIQV 353
N+GK ++ +
Sbjct: 329 VAFQSMMTGGNVGKQIVCI 347
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 165/341 (48%), Gaps = 17/341 (4%)
Query: 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTN 72
+K W + + G PT+ +L+++ + + + V +E L++++DPY+R
Sbjct: 3 TKTWTLKKHFV-GYPTNSDFELKTSE----LPPLKNGEVLLEALFLTVDPYMRVAAKRLK 57
Query: 73 DGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVLRAFLPVAEYSLLPCDLLTRKLDP 132
+G ++ +A+V+ SK+ G IVL + DL +
Sbjct: 58 EG---------DTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEW 108
Query: 133 ASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKV 192
IP L ++G+PG A+ G+ + K G V V+AAAG VG GQ+AKLKGCKV
Sbjct: 109 PDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKV 168
Query: 193 VGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLN 252
VG+ GSD+ V L ++ G+D FNY + S + L K P+G D Y DNVGG+ V+
Sbjct: 169 VGAVGSDEKVAYL-QKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIG 227
Query: 253 HVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGS-HMDRFADFTVEM 311
+ RI +CG IS YN+ G + +I +E++ME F++ D ++
Sbjct: 228 QMKKFGRIAICGAISTYNRTGPLPPGPPPEI-VIYQELRMEAFVVYRWQGDARQKALKDL 286
Query: 312 ESYIKEGKIRSKHVIYYGVXXXXXXXXXXXXXXNIGKVVIQ 352
++ EGKI+ K I G N+GK +++
Sbjct: 287 LKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIVK 327
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 165/341 (48%), Gaps = 17/341 (4%)
Query: 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTN 72
+K W + + G PT+ +L+++ + + + V +E L++++DPY+R
Sbjct: 24 TKTWTLKKHFV-GYPTNSDFELKTSE----LPPLKNGEVLLEALFLTVDPYMRVAAKRLK 78
Query: 73 DGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVLRAFLPVAEYSLLPCDLLTRKLDP 132
+G ++ +A+V+ SK+ G IVL + DL +
Sbjct: 79 EG---------DTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEW 129
Query: 133 ASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKV 192
IP L ++G+PG A+ G+ + K G V V+AAAG VG GQ+AKLKGCKV
Sbjct: 130 PDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKV 189
Query: 193 VGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLN 252
VG+ GSD+ V L ++ G+D FNY + S + L K P+G D Y DNVGG+ V+
Sbjct: 190 VGAVGSDEKVAYL-QKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIG 248
Query: 253 HVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGS-HMDRFADFTVEM 311
+ RI +CG IS YN+ G + +I +E++ME F++ D ++
Sbjct: 249 QMKKFGRIAICGAISTYNRTGPLPPGPPPEI-VIYQELRMEAFVVYRWQGDARQKALKDL 307
Query: 312 ESYIKEGKIRSKHVIYYGVXXXXXXXXXXXXXXNIGKVVIQ 352
++ EGKI+ K I G N+GK +++
Sbjct: 308 LKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIVK 348
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 90 GIARVIR---SKDSKYSDGDIVLRAFLP---VAEYSLLPCDLLTRKLDPASGIPFPDYLS 143
GI V+ S ++Y+ G V A++ AEY+++P + T P + P+YL+
Sbjct: 99 GIGEVVALGLSASARYTVGQAV--AYMAPGSFAEYTVVPASIAT----PVPSVK-PEYLT 151
Query: 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVK 203
L + G A++ ++ LG G V V+AAAGG G FA QL+K C V+G+ SD+
Sbjct: 152 LL-VSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSA 210
Query: 204 LLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILC 263
LK G D NY +E L + +P G+DV ++VGG M + ++ + R+I+
Sbjct: 211 FLK-SLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVI 268
Query: 264 GMISQYNKVWTERDGVRN---LLNMIGKEVKMEGFMIGSHMDRF 304
G IS Y + T V+ ++ K ++GF + ++ ++
Sbjct: 269 GFISGY-QTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKY 311
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 90 GIARVIR---SKDSKYSDGDIVLRAFLP---VAEYSLLPCDLLTRKLDPASGIPFPDYLS 143
GI V+ S ++Y+ G V A++ AEY+++P + T P + P+YL+
Sbjct: 70 GIGEVVALGLSASARYTVGQAV--AYMAPGSFAEYTVVPASIAT----PVPSVK-PEYLT 122
Query: 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVK 203
L + G A++ ++ LG G V V+AAAGG G FA QL+K C V+G+ SD+
Sbjct: 123 LL-VSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSA 181
Query: 204 LLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILC 263
LK G D NY +E L + +P G+DV ++VGG M + ++ + R+I+
Sbjct: 182 FLK-SLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVI 239
Query: 264 GMISQYNKVWTERDGVRN---LLNMIGKEVKMEGFMIGSHMDRF 304
G IS Y + T V+ ++ K ++GF + ++ ++
Sbjct: 240 GFISGY-QTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKY 282
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 18/223 (8%)
Query: 90 GIARVIR---SKDSKYSDGDIVLRAFLP---VAEYSLLPCDLLTRKLDPASGIPFPDYLS 143
GI V+ S ++Y+ G V A++ AEY+++P + T P + P+YL+
Sbjct: 91 GIGEVVALGLSASARYTVGQAV--AYMAPGSFAEYTVVPASIAT----PVPSVK-PEYLT 143
Query: 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVK 203
L + G A++ ++ LG G V V+AAAGG G FA QL+K C V+G+ SD+
Sbjct: 144 LL-VSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSA 202
Query: 204 LLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILC 263
LK G D NY +E L + +P G+DV ++VGG M + ++ + R+I+
Sbjct: 203 FLK-SLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVI 260
Query: 264 GMISQYNKVWTERDGVRNLL--NMIGKEVKMEGFMIGSHMDRF 304
G IS Y L ++ K ++GF + ++ ++
Sbjct: 261 GFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKY 303
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 116/244 (47%), Gaps = 29/244 (11%)
Query: 32 LKLRSASVSLAIDSIPDHHVAVETLWISIDP---YLRATMTGTNDGL-YFPQFNLNQVIL 87
LKLRS +A+ DH V ++ ++P Y+R+ L Y P ++ VI
Sbjct: 44 LKLRS---DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIE 100
Query: 88 AFGIARVIRSKDSKYSDGDIVLRAFL---PVAEYSLLPCDL---LTRKLDPASGIPFPDY 141
A G S + GD V + AEY+L L KLD G
Sbjct: 101 AVG------DNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQG------ 148
Query: 142 LSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDN 201
+++GIP F A+ + K+G +V V A+GGVG+ A Q+A+ G K++G+ G+++
Sbjct: 149 -AAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEG 207
Query: 202 VKLLKEEFGYDDAFNYNSEMSFDAALTKYF-PNGIDVYLDNVGGKMLEAVLNHVNVHARI 260
K++ + G + FN+ E+++ + KY GID+ ++ + L L+ ++ R+
Sbjct: 208 QKIVLQN-GAHEVFNHR-EVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRV 265
Query: 261 ILCG 264
I+ G
Sbjct: 266 IVVG 269
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 94/212 (44%), Gaps = 18/212 (8%)
Query: 152 AWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGY 211
A+ + V G+ + G +V + + +GGVG A +A +GC+V + GS + L+ F
Sbjct: 1655 AYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQ 1714
Query: 212 DD--AFNYNSEMSFDAALTKYFP-NGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMISQ 268
D F + + SF+ + ++ G+D+ L+++ + L+A + + H R + G
Sbjct: 1715 LDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDL 1774
Query: 269 YNKVWTERDGVRNLLNM--IGKEVKMEGFMIGSHMDR----FADFTVEMESYIKEGKIRS 322
N + L M K V G ++ S + + + + +++ I+EG ++
Sbjct: 1775 SNN---------HALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQP 1825
Query: 323 KHVIYYGVXXXXXXXXXXXXXXNIGKVVIQVK 354
+ +IGKVVIQV+
Sbjct: 1826 LKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVR 1857
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 105 GDIVLRAFLP---VAEYSLLPCDLLTRKLDPASGIPFPDYLS---SLGIPGFAAWVG--- 155
GD + A LP A+Y +P LL +P P+ L+ + IP AW+
Sbjct: 105 GDTAM-ALLPGGGQAQYVTVPEGLL---------MPIPEGLTLTQAAAIP--EAWLTAFQ 152
Query: 156 -IEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDA 214
+ ++G ++G V + A GVG A QL ++ G + + GS +++ E+ G
Sbjct: 153 LLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM-AEKLGAAAG 211
Query: 215 FNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMI 266
FNY E +A L G+++ LD +GG E +N + + R +L G++
Sbjct: 212 FNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLM 263
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 105 GDIVLRAFLP---VAEYSLLPCDLLTRKLDPASGIPFPDYLS---SLGIPGFAAWVG--- 155
GD + A LP A+Y +P LL +P P+ L+ + IP AW+
Sbjct: 89 GDTAM-ALLPGGGQAQYVTVPEGLL---------MPIPEGLTLTQAAAIP--EAWLTAFQ 136
Query: 156 -IEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDA 214
+ ++G ++G V + A GVG A QL ++ G + + GS +++ E+ G
Sbjct: 137 LLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM-AEKLGAAAG 195
Query: 215 FNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMI 266
FNY E +A L G+++ LD +GG E +N + + R +L G++
Sbjct: 196 FNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLM 247
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 116 AEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQP--KSGSNVFVSAA 173
AEY D + +KL+ S +L + +P A ++ L Q K G V + A
Sbjct: 109 AEYVCASPDTIIQKLEKLS------FLQAASLPT-AGLTALQALNQAEVKQGDVVLIHAG 161
Query: 174 AGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPN 233
AGGVG A QLAK KG V+ +T S N LK G + NY+ E D L P
Sbjct: 162 AGGVGHLAIQLAKQKGTTVI-TTASKRNHAFLK-ALGAEQCINYHEE---DFLLAISTP- 215
Query: 234 GIDVYLDNVGG 244
+D +D VGG
Sbjct: 216 -VDAVIDLVGG 225
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 29/212 (13%)
Query: 116 AEYSLLPCDLLTRK-----LDPASGIPFPDYLSSLGIPGFAAW-VGIEVLGQPKSGSNVF 169
AEY +LP L K + A+ IP +L+ AW + ++ LG + G +V
Sbjct: 122 AEYVVLPEANLAPKPKNLSFEEAAAIPL-TFLT--------AWQMVVDKLGV-RPGDDVL 171
Query: 170 VSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTK 229
V AA GV + A Q+AKL G +V+ + GS+D ++ K G D+ NY
Sbjct: 172 VMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADETVNYTHPDWPKEVRRL 230
Query: 230 YFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKE 289
G D +D+ G E V+ RI + G S Y +G ++ ++
Sbjct: 231 TGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGY-------EGTLPFAHVFYRQ 283
Query: 290 VKMEGFMIGSHMDRFADFTVEMESYIKEGKIR 321
+ + G + S F + +++EGK++
Sbjct: 284 LSILGSTMASKSRLF-----PILRFVEEGKLK 310
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 14/122 (11%)
Query: 136 IPFPDYLS-----SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC 190
+P PD L+ + G+ AW + +G+ G V + +A GGVGM A +AK+ G
Sbjct: 5 VPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA 64
Query: 191 KVVGSTGSDDNVKLLK----EEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKM 246
++ + GSD ++L E G + ++ E+ LT + G+DV L+++ G+
Sbjct: 65 RIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEI---LELTDGY--GVDVVLNSLAGEA 119
Query: 247 LE 248
++
Sbjct: 120 IQ 121
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 16/138 (11%)
Query: 116 AEYSLLPCDLLTRKLDPASGIPFP---DYLSSLGIPG--FAAWVGIEVLGQPKSGSNVFV 170
AEY LLP + +PFP D + + +P F W + G +V +
Sbjct: 123 AEYCLLPAGQI---------LPFPKGYDAVKAAALPETFFTVWANLFQXAGLTEGESVLI 173
Query: 171 SAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKY 230
G+G A QLA+ G +V + GS + E G NY SE F A +
Sbjct: 174 HGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEAC-ERLGAKRGINYRSE-DFAAVIKAE 231
Query: 231 FPNGIDVYLDNVGGKMLE 248
G+D+ LD +G E
Sbjct: 232 TGQGVDIILDXIGAAYFE 249
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMS 222
K G V + AAAGGVG+ QL K+KG + +D+ +K+ K E+G + N + E
Sbjct: 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EYGAEYLINASKEDI 205
Query: 223 FDAALTKYFPNGIDVYLDNVGGKMLEAVL 251
L G+D D+VG E L
Sbjct: 206 LRQVLKFTNGKGVDASFDSVGKDTFEISL 234
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 94/255 (36%), Gaps = 46/255 (18%)
Query: 48 DHHVAVETLWISIDPYLRATM-TGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGD 106
+H + V TL +S++ + + TG L FP + G+ + +++ GD
Sbjct: 53 EHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPASD---XSGVVEAVGKSVTRFRPGD 109
Query: 107 IVLRAFLP--------------------------VAEYSLLPCDLLT---RKLDPASGIP 137
V+ F P ++EY +LP + LD A
Sbjct: 110 RVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEA-- 167
Query: 138 FPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTG 197
S+L G AW + G ++G V V GGV +F Q+AK G +V+ ++
Sbjct: 168 -----STLPCAGLTAWFALVEKGHLRAGDRVVVQGT-GGVALFGLQIAKATGAEVIVTSS 221
Query: 198 SDDNVKLLKEEF--GYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHVN 255
S + L F G D N E + G D L+ GG L L V
Sbjct: 222 SREK---LDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVA 278
Query: 256 VHARIILCGMISQYN 270
RI + G++ +
Sbjct: 279 PDGRISVIGVLEGFE 293
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDN---VKLLKEEFGYDDAFNYNS 219
+ G ++ V +AAGGVGM A QLA+ G +V +T S+D V+L +E ++
Sbjct: 344 RPGESLLVHSAAGGVGMAAIQLARHLGAEVY-ATASEDKWQAVELSREHLASSRTCDFEQ 402
Query: 220 EMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMISQYNKV 272
+ L G+DV L+++ G+ +A L + R + G + V
Sbjct: 403 QF-----LGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTDVRDPV 450
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 83/207 (40%), Gaps = 25/207 (12%)
Query: 85 VILAFGIARVIRSKDSKYSD---GDIVLRAFLPVAEYS---LLPCDLLTR-----KLDPA 133
+++ F A V+ +D G+ V P+ YS L P + L + LD
Sbjct: 62 IVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDV 121
Query: 134 SGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVV 193
+L+ L + G A + + K G V + AAAGG+G A+ G V+
Sbjct: 122 -------HLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVI 174
Query: 194 GSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNH 253
G+ +++ + + + G NY+++ + G+DV D++G L+ L+
Sbjct: 175 GTVSTEEKAETAR-KLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDC 233
Query: 254 VNVHARIILCGMISQYNKVWTERDGVR 280
+ GM + Y D +R
Sbjct: 234 LRPR------GMCAAYGHASGVADPIR 254
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 143 SSLGIPGFAAWVGIEVLG----QPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGS 198
+SL AW I +G + +G V + A+GGVG FA Q+ K V + S
Sbjct: 158 ASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVT-AVCS 216
Query: 199 DDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGG 244
D +L++ + G DD +Y S S + L P D LDNVGG
Sbjct: 217 QDASELVR-KLGADDVIDYKSG-SVEEQLKSLKP--FDFILDNVGG 258
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 88 AFGIARVIRSKDSKYSDGDIVLRAFLP-----VAEYSLLPCDLLTRKLDPASGIPFPDYL 142
A G+ + ++ + ++ GDIV + P AEY L+ L+ + S +
Sbjct: 67 AIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISA----EQA 122
Query: 143 SSLGIPGFAAW------VGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGST 196
SL + G A+ GI G + + AGGVG A Q+AK G +V+ +
Sbjct: 123 VSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTA 182
Query: 197 GSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDV 237
++ ++ K + G D N+ ++ L ++ GI++
Sbjct: 183 SRNETIEWTK-KMGADIVLNHK-----ESLLNQFKTQGIEL 217
>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1Y9E|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
Length = 330
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 34/243 (13%)
Query: 40 SLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKD 99
+++ + +P V ++ + I+ + + G G ++ L I A G V+ S D
Sbjct: 23 TISTEDLPKDGVLIKVAYSGIN--YKDGLAGKAGGNIVREYPLILGIDAAGT--VVSSND 78
Query: 100 SKYSDGDIVLRAFLPV--------AEYSLLPCDLLTRKLDPASGIPFPDYLS-----SLG 146
++++GD V+ + +EY+ +P D L +P P LS G
Sbjct: 79 PRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWL---------VPLPQNLSLKEAXVYG 129
Query: 147 IPGFAAWVGIEVLGQ----PKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNV 202
GF A + + L Q P+ GS + A G G+ L K +G VV STG+ +
Sbjct: 130 TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSXLNK-RGYDVVASTGNREAA 188
Query: 203 KLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIIL 262
LK+ G + + E +D L +D VGGK L ++L+ + + +
Sbjct: 189 DYLKQ-LGASEVIS--REDVYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAV 245
Query: 263 CGM 265
G+
Sbjct: 246 SGL 248
>pdb|3I65|A Chain A, Plasmodium Falciparum Dihydroorotate Dehydrogenase Bound
With Triazolopyrimidine-Based Inhibitor Dsm1
pdb|3I68|A Chain A, Plasmodium Falciparum Dihydroorotate Dehydrogenase Bound
With Triazolopyrimidine-Based Inhibitor Dsm2
pdb|3I6R|A Chain A, Plasmodium Falciparum Dihydroorotate Dehydrogenase Bound
With Triazolopyrimidine-Based Inhibitor Dsm74
pdb|3O8A|A Chain A, Crystal Structure Of Plasmodium Falciparum Dihydroorotate
Dehydrogenase Bound With Novel Inhibitor Genz667348
Length = 415
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 14/87 (16%)
Query: 66 ATMTGTNDGL-----YFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVLRAFLPVAEYSL 120
A+MTG G Y P+F L + L F + KY DG+I FL + +Y++
Sbjct: 22 ASMTGGQQGRDPFESYNPEFFLYDIFLKFCL---------KYIDGEICHDLFLLLGKYNI 72
Query: 121 LPCDLLTRKLDPASGIPFPDYLSSLGI 147
LP D + + I D+++ G+
Sbjct: 73 LPYDTSNDSIYACTNIKHLDFINPFGV 99
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 8/134 (5%)
Query: 90 GIARVIRSKDSKYSDGDIVLRAFLPVAEYS---LLPCDLLTRKLDPASGIPFPDYLSSLG 146
G+ + + +++ GD V P+ YS +LP L + D S F + ++L
Sbjct: 67 GVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVS---F-EQAAALM 122
Query: 147 IPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLK 206
+ G + Q K G + AAAGGVG A Q AK G K++G+ S + K
Sbjct: 123 LKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK 182
Query: 207 EEFGYDDAFNYNSE 220
G + +Y+ E
Sbjct: 183 -ALGAWETIDYSHE 195
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 14/160 (8%)
Query: 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223
+G V +S AAGG+G A Q AK G +V+G G + +L + G + ++ E
Sbjct: 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SIGGEVFIDFTKEKDI 227
Query: 224 DAALTKYFPNGIDVYLD-NVGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNL 282
A+ K G ++ +V +EA +V + +L GM + ++
Sbjct: 228 VGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKC-------CSDV 280
Query: 283 LNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRS 322
N + K + + G +G+ D T E + G ++S
Sbjct: 281 FNQVVKSISIVGSYVGNRAD-----TREALDFFARGLVKS 315
>pdb|1TV5|A Chain A, Plasmodium Falciparum Dihydroorotate Dehydrogenase With A
Bound Inhibitor
Length = 443
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 76 YFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVLRAFLPVAEYSLLPCDLLTRKLDPASG 135
Y P+F L + L F + KY DG+I FL + +Y++LP D + +
Sbjct: 35 YNPEFFLYDIFLKFCL---------KYIDGEICHDLFLLLGKYNILPYDTSNDSIYACTN 85
Query: 136 IPFPDYLSSLGI 147
I D+++ G+
Sbjct: 86 IKHLDFINPFGV 97
>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh
pdb|1O8C|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|B Chain B, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|C Chain C, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|D Chain D, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
Length = 345
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 93/237 (39%), Gaps = 36/237 (15%)
Query: 46 IPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDG 105
+P+ V V+ W S++ + + T G F + I G R S+D ++ G
Sbjct: 46 LPEGDVTVDVHWSSLN--YKDALAITGKGKIIRNFPMIPGIDFAGTVRT--SEDPRFHAG 101
Query: 106 DIVLRAFLPV--------AEYSLLPCDLLTRKLDPASGIPFPDYLSS-----LGIPGFAA 152
VL V AE + + D L + P L + +G GF A
Sbjct: 102 QEVLLTGWGVGENHWGGLAEQARVKGDWL---------VAMPQGLDARKAMIIGTAGFTA 152
Query: 153 WVGIEVLG----QPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEE 208
+ + L +P+ G + V+ A+GGVG A L G +VV +G + + LK
Sbjct: 153 MLCVMALEDAGVRPQDG-EIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-S 210
Query: 209 FGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGM 265
G + E + L K G +D VG K+L VL +N + CG+
Sbjct: 211 LGASRVLPRD-EFAESRPLEKQVWAGA---IDTVGDKVLAKVLAQMNYGGCVAACGL 263
>pdb|3SFK|A Chain A, Crystal Structure Of Plasmodium Falciparum Dihydroorotate
Dehydrogenase Bound With Inhibitor Dsm267
Length = 400
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 76 YFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVLRAFLPVAEYSLLPCDLLTRKLDPASG 135
Y P+F L + L F + KY DG+I FL + +Y++LP D + +
Sbjct: 22 YNPEFFLYDIFLKFCL---------KYIDGEICHDLFLLLGKYNILPYDTSNDSIYACTN 72
Query: 136 IPFPDYLSSLGI 147
I D+++ G+
Sbjct: 73 IKHLDFINPFGV 84
>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
pdb|3NX4|B Chain B, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
Length = 324
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 15/143 (10%)
Query: 136 IPFPDYLSS-----LGIPGFAAWVGIEVLG----QPKSGSNVFVSAAAGGVGMFAGQLAK 186
+ P LSS +G GF A + + L +P+ G V V+ A+GGVG A L
Sbjct: 110 VALPAGLSSRNAXIIGTAGFTAXLCVXALEDAGIRPQDG-EVVVTGASGGVGSTAVALLH 168
Query: 187 LKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKM 246
G +V +G + LK G + + + E + L K G +D VG K+
Sbjct: 169 KLGYQVAAVSGRESTHGYLK-SLGANRILSRD-EFAESRPLEKQLWAG---AIDTVGDKV 223
Query: 247 LEAVLNHVNVHARIILCGMISQY 269
L VL N + CG+ +
Sbjct: 224 LAKVLAQXNYGGCVAACGLAGGF 246
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 9/145 (6%)
Query: 60 IDPYLRATMTGTNDGLYFP-QFNLNQVILAFGIARVIRSKDSKYSDGDIVLRAFLPVAEY 118
ID Y+R+ GLY P A GI + S GD V+ A + Y
Sbjct: 43 IDTYIRS-------GLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAY 95
Query: 119 SLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVG 178
S + + + + I F +S + G + + + K AAAGGVG
Sbjct: 96 SSVHNIIADKAAILPAAISFEQAAASF-LKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVG 154
Query: 179 MFAGQLAKLKGCKVVGSTGSDDNVK 203
+ A Q AK G K++G+ G+ +
Sbjct: 155 LIACQWAKALGAKLIGTVGTAQKAQ 179
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 77/199 (38%), Gaps = 28/199 (14%)
Query: 116 AEYSLLPCDL---LTRKLDPASGI---PFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVF 169
AEY L+P + LDP G P L + + G A + +LG
Sbjct: 140 AEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILG--------- 190
Query: 170 VSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFD--AAL 227
G +G+ QLA+L G V + + L EE G + ++ + A
Sbjct: 191 ----GGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGP 246
Query: 228 TKYFPNGIDVYLDNVG-GKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMI 286
P G+DV ++ G + ++ +++ G++ Q KV E +++
Sbjct: 247 VGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEP------FDIL 300
Query: 287 GKEVKMEGFMIGSHMDRFA 305
+E+++ G I + R A
Sbjct: 301 FRELRVLGSFINPFVHRRA 319
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 48/198 (24%)
Query: 94 VIRSKDSKYSDGDIVLRA--------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLS-- 143
V+ S+ ++ +GD V+ F +EY+ L + L +P P L+
Sbjct: 72 VVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWL---------VPLPKGLTLK 122
Query: 144 ---SLGIPGFAAWVGIEVLGQ----PKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGST 196
++G GF A + I L + P+ G V V+ A GGVG A +G V ST
Sbjct: 123 EAXAIGTAGFTAALSIHRLEEHGLTPERGP-VLVTGATGGVGSLAVSXLAKRGYTVEAST 181
Query: 197 G---SDDNVKLL--KEEFGYDDAFNYN----SEMSFDAALTKYFPNGIDVYLDNVGGKML 247
G D +++L KE +D + + AA +D VGG+ L
Sbjct: 182 GKAAEHDYLRVLGAKEVLAREDVXAERIRPLDKQRWAAA------------VDPVGGRTL 229
Query: 248 EAVLNHVNVHARIILCGM 265
VL+ + + G+
Sbjct: 230 ATVLSRXRYGGAVAVSGL 247
>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|E Chain E, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|F Chain F, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
Length = 251
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD---AFNYNSEM 221
G V+ A+ G+G +L +G KV+G+ S+ + + + G + A N +
Sbjct: 12 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPE 71
Query: 222 SFDA---ALTKYFPNGIDVYLDNVG 243
S +A A+T F G+D+ ++N G
Sbjct: 72 SIEAVLKAITDEF-GGVDILVNNAG 95
>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RSH|B Chain B, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RRO|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|3RRO|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|4I08|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
pdb|4I08|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
Length = 251
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD---AFNYNSEM 221
G V+ A+ G+G +L +G KV+G+ S+ + + + G + A N +
Sbjct: 12 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPE 71
Query: 222 SFDA---ALTKYFPNGIDVYLDNVG 243
S +A A+T F G+D+ ++N G
Sbjct: 72 SIEAVLKAITDEF-GGVDILVNNAG 95
>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
Length = 251
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD---AFNYNSEM 221
G V+ A+ G+G +L +G KV+G+ S+ + + + G + A N +
Sbjct: 12 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPE 71
Query: 222 SFDA---ALTKYFPNGIDVYLDNVG 243
S +A A+T F G+D+ ++N G
Sbjct: 72 SIEAVLKAITDEF-GGVDILVNNAG 95
>pdb|3OP4|A Chain A, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
pdb|3OP4|B Chain B, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
Length = 248
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEM 221
G V+ A+ G+G +L +G KV+G+ S+ + + + + G A N +
Sbjct: 9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGXALNVTNPE 68
Query: 222 SFDA---ALTKYFPNGIDVYLDNVG 243
S +A A+T F G+D+ ++N G
Sbjct: 69 SIEAVLKAITDEF-GGVDILVNNAG 92
>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
pdb|3U09|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
Length = 251
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD---AFNYNSEM 221
G V+ A+ G+G +L +G KV+G+ S+ + + + G + A N +
Sbjct: 12 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPE 71
Query: 222 SFDA---ALTKYFPNGIDVYLDN 241
S +A A+T F G+D+ ++N
Sbjct: 72 SIEAVLKAITDEF-GGVDILVNN 93
>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
pdb|3TZK|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
Length = 251
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD---AFNYNSEM 221
G V+ A+ G+G +L +G KV+G+ S+ + + + G + A N +
Sbjct: 12 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPE 71
Query: 222 SFDA---ALTKYFPNGIDVYLDN 241
S +A A+T F G+D+ ++N
Sbjct: 72 SIEAVLKAITDEF-GGVDILVNN 93
>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|B Chain B, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|C Chain C, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|D Chain D, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
Length = 279
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 169 FVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYDDAF-NYNSEMSFD 224
V+ A+GG+G + +G KVVG + N++ L E GY Y ++S +
Sbjct: 36 LVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE 95
Query: 225 AALTKYFP------NGIDVYLDNVG 243
+ F +G+D+ ++N G
Sbjct: 96 EDILSMFSAIRSQHSGVDICINNAG 120
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 136 IPFPDYLS--SLGIPGFAAWVGIEVL-----GQPKSGSNVFVSAAAGGVGMFAGQLAKLK 188
+P PD+LS PG L K G NV + A+GG+G +A Q A
Sbjct: 193 MPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAG 252
Query: 189 GCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSE 220
G + S ++ + G + + N+E
Sbjct: 253 GANPICVVSSPQKAEICR-AMGAEAIIDRNAE 283
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 71/211 (33%), Gaps = 30/211 (14%)
Query: 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNS--- 219
K G NV + A+GG+G +A Q A G + S ++ + G + + N+
Sbjct: 245 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR-SMGAEAIIDRNAEGY 303
Query: 220 -----EMSFDAALTKYFPN---------GIDVYLDNVGGKMLEAVLNHVNVHARIILCGM 265
E + D K F ID+ ++ G + A + I C
Sbjct: 304 KFWKDEHTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVYVTRKGGTITTCAS 363
Query: 266 ISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRSKHV 325
S Y + R L M K + IGSH + + E I +GKI
Sbjct: 364 TSGYMHEYDNR-----YLWMSLKRI------IGSHFANYRE-AYEANRLIAKGKIHPTLS 411
Query: 326 IYYGVXXXXXXXXXXXXXXNIGKVVIQVKAP 356
Y + + GKV + AP
Sbjct: 412 KTYSLEETGQAAYDVHRNLHQGKVGVLCLAP 442
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 16/195 (8%)
Query: 134 SGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVV 193
S IP ++LG+ A+ + Q + G +V +A+ GVG Q+A G + +
Sbjct: 125 SDIPL-QSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTI 183
Query: 194 GSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGID---VYLDNVGGKMLEAV 250
+++ L + A + +E K F + + L+ VGGK +
Sbjct: 184 NVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTEL 243
Query: 251 LNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGS-----HMDRFA 305
L + ++ G +++ + V ++ +I K++K+ GF + D+F
Sbjct: 244 LRQLARGGTMVTYGGMAK-------QPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFK 296
Query: 306 DFTVEMESYIKEGKI 320
+ + + I+ G++
Sbjct: 297 ELILTLCDLIRRGQL 311
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 16/195 (8%)
Query: 134 SGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVV 193
S IP ++LG+ A+ + Q + G +V +A+ GVG Q+A G + +
Sbjct: 138 SDIPL-QSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTI 196
Query: 194 GSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGID---VYLDNVGGKMLEAV 250
+++ L + A + +E K F + + L+ VGGK +
Sbjct: 197 NVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTEL 256
Query: 251 LNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGS-----HMDRFA 305
L + ++ G +++ + V ++ +I K++K+ GF + D+F
Sbjct: 257 LRQLARGGTMVTYGGMAK-------QPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFK 309
Query: 306 DFTVEMESYIKEGKI 320
+ + + I+ G++
Sbjct: 310 ELILTLCDLIRRGQL 324
>pdb|3LXQ|A Chain A, The Crystal Structure Of A Protein In The Alkaline
Phosphatase Superfamily From Vibrio Parahaemolyticus To
1.95a
pdb|3LXQ|B Chain B, The Crystal Structure Of A Protein In The Alkaline
Phosphatase Superfamily From Vibrio Parahaemolyticus To
1.95a
Length = 450
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 204 LLKEEFGYDDAFNYNSEMSFDAALTKYFPNGID 236
LLKE+ GY F Y E +FD T +F NG D
Sbjct: 168 LLKEQ-GYHTQFIYGGEANFDNXKTFFFGNGFD 199
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 10/135 (7%)
Query: 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYN 218
L Q NV + AG +G+ A Q A G K V + L + FG FN +
Sbjct: 155 LAQGCENKNVII-IGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFN-S 212
Query: 219 SEMS---FDAALTKYFPNGIDVYLDNVG-GKMLEAVLNHVNVHARIILCGMISQYNKVWT 274
SEMS + L + N + L+ G + +E + HA++ L G + Q + +
Sbjct: 213 SEMSAPQMQSVLRELRFN--QLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTS 270
Query: 275 ERDG--VRNLLNMIG 287
G +R L +IG
Sbjct: 271 ATFGKILRKELTVIG 285
>pdb|1M2O|B Chain B, Crystal Structure Of The Sec23-Sar1 Complex
pdb|1M2O|D Chain D, Crystal Structure Of The Sec23-Sar1 Complex
Length = 190
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 76 YFPQFNLNQVILAFGIARVIRSKD-SKYSDGDIVLRAFLPVAEYSLLPCDLLTRKLDPAS 134
YFP+ N GI ++ + D ++ + + L A +AE +P +L K+D +
Sbjct: 87 YFPEVN--------GIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPN 138
Query: 135 GIPFPDYLSSLGI 147
+ + S+LG+
Sbjct: 139 AVSEAELRSALGL 151
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 152 AWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGY 211
AW G+ Q + G V + GGVG A Q+A +G +V +T +++ +++
Sbjct: 138 AWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVF-ATARGSDLEYVRDLGAT 196
Query: 212 DDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILC 263
+ E D A G D+ D +GG +L+A + V ++ C
Sbjct: 197 PIDASREPE---DYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSC 245
>pdb|2QTV|B Chain B, Structure Of Sec23-Sar1 Complexed With The Active Fragment
Of Sec31
Length = 167
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 76 YFPQFNLNQVILAFGIARVIRSKD-SKYSDGDIVLRAFLPVAEYSLLPCDLLTRKLDPAS 134
YFP+ N GI ++ + D ++ + + L A +AE +P +L K+D +
Sbjct: 65 YFPEVN--------GIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPN 116
Query: 135 GIPFPDYLSSLGI 147
+ + S+LG+
Sbjct: 117 AVSEAELRSALGL 129
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,707,538
Number of Sequences: 62578
Number of extensions: 458364
Number of successful extensions: 1045
Number of sequences better than 100.0: 62
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 950
Number of HSP's gapped (non-prelim): 66
length of query: 356
length of database: 14,973,337
effective HSP length: 100
effective length of query: 256
effective length of database: 8,715,537
effective search space: 2231177472
effective search space used: 2231177472
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)