Query 042784
Match_columns 356
No_of_seqs 146 out of 1847
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 09:25:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042784.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042784hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 5.7E-54 1.2E-58 378.2 32.3 306 11-354 2-338 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 6.9E-52 1.5E-56 374.1 34.2 318 13-353 1-326 (326)
3 KOG1197 Predicted quinone oxid 100.0 2.5E-50 5.5E-55 331.5 27.3 318 13-355 9-332 (336)
4 PLN03154 putative allyl alcoho 100.0 1.8E-47 3.8E-52 351.5 38.0 339 11-356 7-348 (348)
5 cd08295 double_bond_reductase_ 100.0 1.5E-46 3.3E-51 344.9 38.1 334 13-353 3-338 (338)
6 KOG0024 Sorbitol dehydrogenase 100.0 5.1E-47 1.1E-51 323.9 28.3 312 11-355 3-354 (354)
7 KOG0023 Alcohol dehydrogenase, 100.0 2.2E-46 4.9E-51 319.1 29.4 312 11-355 8-356 (360)
8 COG1062 AdhC Zn-dependent alco 100.0 3.8E-46 8.2E-51 321.4 28.2 310 12-352 2-365 (366)
9 COG2130 Putative NADP-dependen 100.0 2.8E-45 6.1E-50 310.2 32.7 330 14-355 10-340 (340)
10 cd08281 liver_ADH_like1 Zinc-d 100.0 1.2E-44 2.7E-49 336.1 34.0 316 13-351 1-371 (371)
11 cd08293 PTGR2 Prostaglandin re 100.0 1.1E-42 2.3E-47 320.5 37.9 332 13-353 3-345 (345)
12 TIGR03451 mycoS_dep_FDH mycoth 100.0 4.2E-43 9.2E-48 324.4 34.2 310 12-352 1-357 (358)
13 PLN02586 probable cinnamyl alc 100.0 4.6E-43 1E-47 323.7 33.0 315 1-353 1-353 (360)
14 cd08239 THR_DH_like L-threonin 100.0 8.3E-43 1.8E-47 320.4 33.7 304 13-353 1-339 (339)
15 TIGR02825 B4_12hDH leukotriene 100.0 1.8E-42 3.8E-47 316.4 34.4 322 14-352 2-325 (325)
16 cd08294 leukotriene_B4_DH_like 100.0 2.1E-42 4.5E-47 316.5 34.8 320 12-353 2-329 (329)
17 PLN02740 Alcohol dehydrogenase 100.0 1.7E-42 3.8E-47 322.6 34.8 314 11-353 9-381 (381)
18 PLN02827 Alcohol dehydrogenase 100.0 3E-42 6.4E-47 320.2 34.7 311 11-354 11-377 (378)
19 cd08291 ETR_like_1 2-enoyl thi 100.0 1.9E-42 4.2E-47 316.0 32.2 313 13-352 1-324 (324)
20 PRK09880 L-idonate 5-dehydroge 100.0 2.1E-42 4.6E-47 317.9 32.7 302 12-353 4-343 (343)
21 TIGR02818 adh_III_F_hyde S-(hy 100.0 2E-41 4.3E-46 314.0 34.5 311 13-353 2-368 (368)
22 PLN02178 cinnamyl-alcohol dehy 100.0 2.2E-41 4.8E-46 313.4 34.1 306 12-354 4-349 (375)
23 cd08301 alcohol_DH_plants Plan 100.0 5.1E-41 1.1E-45 311.8 34.6 310 12-351 2-368 (369)
24 cd08300 alcohol_DH_class_III c 100.0 5.5E-41 1.2E-45 311.3 34.6 311 12-352 2-368 (368)
25 KOG0022 Alcohol dehydrogenase, 100.0 2.8E-41 6.2E-46 286.5 28.8 311 12-352 7-374 (375)
26 PLN02514 cinnamyl-alcohol dehy 100.0 1.3E-40 2.8E-45 307.3 34.8 306 12-355 9-352 (357)
27 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.7E-40 3.7E-45 303.0 33.2 285 30-351 13-328 (329)
28 PRK10309 galactitol-1-phosphat 100.0 2.9E-40 6.3E-45 304.4 33.1 311 13-354 1-347 (347)
29 cd08277 liver_alcohol_DH_like 100.0 4E-40 8.7E-45 305.2 34.0 308 12-351 2-364 (365)
30 KOG1196 Predicted NAD-dependen 100.0 6.1E-40 1.3E-44 276.8 31.6 340 11-355 2-342 (343)
31 cd08292 ETR_like_2 2-enoyl thi 100.0 8.1E-40 1.8E-44 298.7 32.7 315 13-352 1-324 (324)
32 TIGR03201 dearomat_had 6-hydro 100.0 2.2E-39 4.7E-44 298.6 32.7 295 31-353 10-349 (349)
33 cd08233 butanediol_DH_like (2R 100.0 2.9E-39 6.3E-44 298.2 33.3 305 13-351 1-350 (351)
34 KOG0025 Zn2+-binding dehydroge 100.0 1.9E-39 4.2E-44 272.0 27.4 320 11-353 18-352 (354)
35 TIGR02819 fdhA_non_GSH formald 100.0 6.3E-39 1.4E-43 298.5 33.6 315 12-354 2-391 (393)
36 cd08238 sorbose_phosphate_red 100.0 5.9E-39 1.3E-43 301.4 33.5 314 12-354 2-369 (410)
37 cd08230 glucose_DH Glucose deh 100.0 3.1E-39 6.7E-44 298.4 30.3 306 13-353 1-355 (355)
38 KOG1198 Zinc-binding oxidoredu 100.0 3.2E-39 7E-44 291.6 29.0 315 27-354 15-346 (347)
39 TIGR01202 bchC 2-desacetyl-2-h 100.0 8.6E-39 1.9E-43 289.3 29.0 291 13-352 2-308 (308)
40 cd08237 ribitol-5-phosphate_DH 100.0 1.2E-38 2.6E-43 292.4 29.6 287 29-354 11-340 (341)
41 cd08296 CAD_like Cinnamyl alco 100.0 4.6E-38 1E-42 288.1 33.2 302 13-352 1-333 (333)
42 COG1063 Tdh Threonine dehydrog 100.0 2.9E-38 6.3E-43 289.1 31.6 295 34-353 15-350 (350)
43 cd08231 MDR_TM0436_like Hypoth 100.0 5.1E-38 1.1E-42 291.1 32.8 307 14-352 2-360 (361)
44 cd08290 ETR 2-enoyl thioester 100.0 3.2E-38 6.9E-43 290.3 31.2 318 13-353 1-341 (341)
45 cd08246 crotonyl_coA_red croto 100.0 1.2E-37 2.6E-42 291.6 33.8 317 10-352 10-392 (393)
46 cd08278 benzyl_alcohol_DH Benz 100.0 1.8E-37 4E-42 287.4 33.4 310 12-352 2-365 (365)
47 cd08244 MDR_enoyl_red Possible 100.0 4.4E-37 9.5E-42 280.6 35.4 318 13-353 1-324 (324)
48 TIGR01751 crot-CoA-red crotony 100.0 2.6E-37 5.6E-42 289.6 34.5 320 10-356 5-390 (398)
49 cd05284 arabinose_DH_like D-ar 100.0 2E-37 4.3E-42 284.9 32.9 307 13-353 1-340 (340)
50 TIGR02817 adh_fam_1 zinc-bindi 100.0 2.6E-37 5.6E-42 283.7 32.5 312 14-352 1-334 (336)
51 PTZ00354 alcohol dehydrogenase 100.0 9.5E-37 2.1E-41 279.5 35.1 322 12-356 1-331 (334)
52 cd08250 Mgc45594_like Mgc45594 100.0 1.3E-36 2.9E-41 278.1 35.4 324 12-352 1-329 (329)
53 cd05288 PGDH Prostaglandin deh 100.0 8.4E-37 1.8E-41 279.4 33.8 323 13-351 2-329 (329)
54 cd08274 MDR9 Medium chain dehy 100.0 1.2E-36 2.6E-41 280.8 32.6 309 13-353 1-350 (350)
55 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 2.8E-36 6.1E-41 275.4 34.4 313 13-353 1-325 (325)
56 cd08263 Zn_ADH10 Alcohol dehyd 100.0 1.8E-36 3.9E-41 281.2 33.3 308 13-352 1-367 (367)
57 cd08285 NADP_ADH NADP(H)-depen 100.0 1.9E-36 4.1E-41 279.5 33.1 310 13-353 1-351 (351)
58 cd08240 6_hydroxyhexanoate_dh_ 100.0 2.2E-36 4.8E-41 279.0 33.5 309 13-352 1-349 (350)
59 PRK10754 quinone oxidoreductas 100.0 2.9E-36 6.2E-41 275.7 33.8 315 13-352 2-326 (327)
60 cd08297 CAD3 Cinnamyl alcohol 100.0 3.7E-36 8E-41 276.5 34.7 309 13-353 1-341 (341)
61 cd08270 MDR4 Medium chain dehy 100.0 3.1E-36 6.8E-41 272.7 33.5 301 13-353 1-305 (305)
62 cd05282 ETR_like 2-enoyl thioe 100.0 3.1E-36 6.6E-41 274.9 32.0 304 30-352 12-323 (323)
63 cd05278 FDH_like Formaldehyde 100.0 4.4E-36 9.6E-41 276.7 32.8 306 13-353 1-347 (347)
64 cd08289 MDR_yhfp_like Yhfp put 100.0 5.1E-36 1.1E-40 273.9 32.8 314 13-353 1-326 (326)
65 PRK09422 ethanol-active dehydr 100.0 1E-35 2.2E-40 273.3 33.8 305 13-354 1-337 (338)
66 TIGR02823 oxido_YhdH putative 100.0 1.4E-35 3E-40 270.7 34.4 311 14-353 1-323 (323)
67 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.2E-35 2.6E-40 273.6 34.2 310 13-352 1-344 (345)
68 cd08283 FDH_like_1 Glutathione 100.0 1.1E-35 2.3E-40 277.4 33.4 306 13-352 1-385 (386)
69 cd08243 quinone_oxidoreductase 100.0 1.5E-35 3.2E-40 269.9 33.4 310 13-351 1-319 (320)
70 cd08249 enoyl_reductase_like e 100.0 6.4E-36 1.4E-40 274.6 29.8 306 13-353 1-339 (339)
71 cd08299 alcohol_DH_class_I_II_ 100.0 3.2E-35 6.9E-40 272.9 34.6 311 12-353 7-373 (373)
72 cd08261 Zn_ADH7 Alcohol dehydr 100.0 3E-35 6.4E-40 270.1 33.9 303 13-353 1-337 (337)
73 PRK05396 tdh L-threonine 3-deh 100.0 2.1E-35 4.6E-40 271.5 32.9 308 13-354 1-341 (341)
74 PRK10083 putative oxidoreducta 100.0 3.2E-35 6.9E-40 270.1 33.9 304 13-355 1-339 (339)
75 PRK13771 putative alcohol dehy 100.0 3.2E-35 6.8E-40 269.6 32.7 304 13-353 1-333 (334)
76 cd08279 Zn_ADH_class_III Class 100.0 4.9E-35 1.1E-39 271.2 34.3 308 13-350 1-362 (363)
77 cd05279 Zn_ADH1 Liver alcohol 100.0 4E-35 8.6E-40 271.8 33.7 297 30-351 11-364 (365)
78 cd08256 Zn_ADH2 Alcohol dehydr 100.0 4.4E-35 9.6E-40 270.3 33.5 305 13-351 1-350 (350)
79 cd08282 PFDH_like Pseudomonas 100.0 4.9E-35 1.1E-39 272.2 33.5 311 13-353 1-375 (375)
80 cd05283 CAD1 Cinnamyl alcohol 100.0 2.8E-35 6E-40 270.2 31.3 290 30-352 10-337 (337)
81 cd08284 FDH_like_2 Glutathione 100.0 6.6E-35 1.4E-39 268.6 33.4 302 13-352 1-343 (344)
82 cd08236 sugar_DH NAD(P)-depend 100.0 5.2E-35 1.1E-39 269.1 32.5 308 13-351 1-343 (343)
83 cd08276 MDR7 Medium chain dehy 100.0 1.3E-34 2.7E-39 265.6 34.9 312 13-353 1-336 (336)
84 cd08286 FDH_like_ADH2 formalde 100.0 8.6E-35 1.9E-39 267.9 33.9 305 13-353 1-345 (345)
85 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 7.6E-35 1.6E-39 267.4 33.3 308 13-353 1-338 (338)
86 cd08235 iditol_2_DH_like L-idi 100.0 8.1E-35 1.8E-39 267.9 33.3 304 13-352 1-343 (343)
87 cd05285 sorbitol_DH Sorbitol d 100.0 7E-35 1.5E-39 268.2 31.8 295 30-351 8-341 (343)
88 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.7E-34 3.7E-39 264.4 33.8 303 13-352 1-332 (332)
89 PLN02702 L-idonate 5-dehydroge 100.0 1.8E-34 4E-39 267.5 34.2 297 30-352 27-363 (364)
90 cd05276 p53_inducible_oxidored 100.0 2.8E-34 6E-39 261.3 34.3 315 13-351 1-323 (323)
91 cd08253 zeta_crystallin Zeta-c 100.0 3.3E-34 7.1E-39 261.2 34.2 316 13-353 1-325 (325)
92 cd08288 MDR_yhdh Yhdh putative 100.0 4.5E-34 9.8E-39 260.8 34.7 312 13-353 1-324 (324)
93 cd08266 Zn_ADH_like1 Alcohol d 100.0 9.4E-34 2E-38 260.2 35.2 312 13-353 1-342 (342)
94 cd08262 Zn_ADH8 Alcohol dehydr 100.0 4.9E-34 1.1E-38 262.4 32.7 296 31-352 10-341 (341)
95 cd05286 QOR2 Quinone oxidoredu 100.0 1.4E-33 3E-38 256.4 34.9 306 27-353 9-320 (320)
96 cd08252 AL_MDR Arginate lyase 100.0 8.2E-34 1.8E-38 260.4 33.3 314 13-352 1-336 (336)
97 cd08234 threonine_DH_like L-th 100.0 9.1E-34 2E-38 259.9 33.3 300 13-351 1-333 (334)
98 cd08232 idonate-5-DH L-idonate 100.0 7E-34 1.5E-38 261.2 32.4 294 28-353 5-339 (339)
99 cd08273 MDR8 Medium chain dehy 100.0 9.9E-34 2.1E-38 259.3 32.8 317 13-351 1-330 (331)
100 cd08287 FDH_like_ADH3 formalde 100.0 1.3E-33 2.8E-38 260.1 33.1 303 13-352 1-344 (345)
101 cd05281 TDH Threonine dehydrog 100.0 1.2E-33 2.5E-38 259.9 32.6 307 13-353 1-341 (341)
102 cd08272 MDR6 Medium chain dehy 100.0 3.3E-33 7.2E-38 254.9 34.4 311 13-353 1-326 (326)
103 cd08248 RTN4I1 Human Reticulon 100.0 3.4E-34 7.5E-39 264.4 28.1 323 13-352 1-350 (350)
104 cd08242 MDR_like Medium chain 100.0 1.5E-33 3.2E-38 256.9 31.2 285 13-352 1-318 (319)
105 cd08268 MDR2 Medium chain dehy 100.0 5.7E-33 1.2E-37 253.4 34.6 316 13-353 1-328 (328)
106 cd08264 Zn_ADH_like2 Alcohol d 100.0 2.6E-33 5.5E-38 256.0 31.9 296 13-350 1-325 (325)
107 TIGR00692 tdh L-threonine 3-de 100.0 2.7E-33 5.8E-38 257.4 32.0 298 30-353 9-340 (340)
108 cd08269 Zn_ADH9 Alcohol dehydr 100.0 6E-33 1.3E-37 252.0 32.5 299 29-351 4-311 (312)
109 cd08298 CAD2 Cinnamyl alcohol 100.0 5.5E-33 1.2E-37 254.2 32.2 298 13-351 1-329 (329)
110 cd08251 polyketide_synthase po 100.0 4.2E-33 9.1E-38 251.6 30.9 292 44-351 3-303 (303)
111 cd08265 Zn_ADH3 Alcohol dehydr 100.0 6.5E-33 1.4E-37 258.7 32.7 297 31-351 38-383 (384)
112 TIGR02824 quinone_pig3 putativ 100.0 1.5E-32 3.1E-37 250.4 33.8 317 13-353 1-325 (325)
113 cd08271 MDR5 Medium chain dehy 100.0 2.4E-32 5.1E-37 249.3 34.5 316 13-353 1-325 (325)
114 cd08247 AST1_like AST1 is a cy 100.0 1.5E-32 3.2E-37 253.7 31.2 313 31-353 12-352 (352)
115 cd05289 MDR_like_2 alcohol deh 100.0 4.7E-32 1E-36 245.3 32.1 304 13-351 1-309 (309)
116 cd08245 CAD Cinnamyl alcohol d 100.0 4.6E-32 1E-36 248.2 32.0 299 14-351 1-330 (330)
117 cd08241 QOR1 Quinone oxidoredu 100.0 1.3E-31 2.8E-36 243.8 34.4 314 13-352 1-323 (323)
118 cd08275 MDR3 Medium chain dehy 100.0 1.5E-31 3.2E-36 245.3 34.7 312 28-353 10-337 (337)
119 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.7E-31 5.8E-36 240.4 30.3 272 13-318 1-306 (306)
120 cd05195 enoyl_red enoyl reduct 100.0 1.8E-31 4E-36 239.1 29.1 284 49-351 1-293 (293)
121 cd08267 MDR1 Medium chain dehy 100.0 4.9E-31 1.1E-35 240.0 30.1 299 28-351 8-319 (319)
122 smart00829 PKS_ER Enoylreducta 100.0 3.3E-30 7.2E-35 230.6 29.2 280 53-351 2-288 (288)
123 TIGR03366 HpnZ_proposed putati 100.0 7.6E-30 1.6E-34 227.9 21.4 228 85-333 3-280 (280)
124 cd05188 MDR Medium chain reduc 100.0 2.4E-28 5.1E-33 217.0 26.4 234 50-299 1-260 (271)
125 KOG1202 Animal-type fatty acid 100.0 6.3E-29 1.4E-33 239.7 21.9 303 27-355 1424-1743(2376)
126 cd08255 2-desacetyl-2-hydroxye 100.0 3.3E-27 7.1E-32 210.8 23.2 253 74-351 14-277 (277)
127 PF00107 ADH_zinc_N: Zinc-bind 99.7 5.5E-17 1.2E-21 127.8 14.4 127 176-316 1-129 (130)
128 PF13602 ADH_zinc_N_2: Zinc-bi 99.6 2.1E-15 4.6E-20 118.2 7.2 122 209-351 1-127 (127)
129 PF08240 ADH_N: Alcohol dehydr 99.6 8.6E-15 1.9E-19 111.4 8.1 78 48-127 1-107 (109)
130 cd00401 AdoHcyase S-adenosyl-L 99.3 3.1E-11 6.7E-16 111.5 15.3 178 149-354 185-377 (413)
131 PRK09424 pntA NAD(P) transhydr 99.3 1.2E-10 2.5E-15 110.4 16.1 148 162-321 162-333 (509)
132 PRK11873 arsM arsenite S-adeno 98.6 6.5E-07 1.4E-11 79.6 11.0 172 159-352 72-260 (272)
133 PF11017 DUF2855: Protein of u 98.5 9.4E-06 2E-10 72.0 17.1 169 88-268 35-235 (314)
134 TIGR00561 pntA NAD(P) transhyd 98.5 1.7E-06 3.7E-11 82.1 12.0 106 163-270 162-290 (511)
135 TIGR00518 alaDH alanine dehydr 98.4 1.9E-05 4.2E-10 73.0 15.6 99 165-269 167-272 (370)
136 COG4221 Short-chain alcohol de 98.3 3.3E-06 7.1E-11 71.5 9.4 80 164-243 5-90 (246)
137 PRK05476 S-adenosyl-L-homocyst 98.3 1.3E-05 2.9E-10 74.7 12.3 106 149-268 195-303 (425)
138 PRK08306 dipicolinate synthase 98.2 2.8E-05 6.2E-10 69.7 13.3 94 164-268 151-245 (296)
139 TIGR00936 ahcY adenosylhomocys 98.2 2.3E-05 5E-10 72.6 12.6 104 150-267 179-285 (406)
140 PLN02494 adenosylhomocysteinas 98.2 2.6E-05 5.6E-10 73.0 11.8 104 150-267 238-344 (477)
141 COG0300 DltE Short-chain dehyd 98.1 2.3E-05 4.9E-10 68.2 9.7 82 163-244 4-94 (265)
142 PRK08324 short chain dehydroge 98.0 6.9E-05 1.5E-09 75.4 13.0 141 113-268 385-561 (681)
143 PRK12742 oxidoreductase; Provi 98.0 0.00012 2.6E-09 63.4 12.4 103 164-268 5-135 (237)
144 PRK05786 fabG 3-ketoacyl-(acyl 98.0 0.0001 2.2E-09 63.9 11.6 105 164-268 4-139 (238)
145 cd05213 NAD_bind_Glutamyl_tRNA 98.0 9.9E-05 2.2E-09 66.8 11.5 103 133-247 145-251 (311)
146 PRK05693 short chain dehydroge 97.9 0.00021 4.5E-09 63.5 13.1 77 166-243 2-81 (274)
147 PF01488 Shikimate_DH: Shikima 97.9 6E-05 1.3E-09 59.3 8.5 95 164-267 11-112 (135)
148 COG3967 DltE Short-chain dehyd 97.9 6.8E-05 1.5E-09 61.6 8.5 79 164-243 4-87 (245)
149 PF13460 NAD_binding_10: NADH( 97.9 0.00067 1.5E-08 56.2 14.0 92 168-267 1-100 (183)
150 PRK00517 prmA ribosomal protei 97.8 0.00025 5.4E-09 62.2 11.8 143 99-266 64-215 (250)
151 PRK06182 short chain dehydroge 97.8 0.0003 6.5E-09 62.5 12.4 80 164-244 2-84 (273)
152 PRK12771 putative glutamate sy 97.8 2.6E-05 5.7E-10 76.7 5.9 98 161-264 133-253 (564)
153 PRK08265 short chain dehydroge 97.8 0.00046 1E-08 60.9 12.6 80 164-243 5-89 (261)
154 PRK05993 short chain dehydroge 97.8 0.00026 5.6E-09 63.1 10.9 79 164-243 3-85 (277)
155 PLN03209 translocon at the inn 97.8 0.00035 7.6E-09 67.4 12.1 104 159-267 74-210 (576)
156 PRK05872 short chain dehydroge 97.8 0.00027 5.8E-09 63.6 10.9 81 164-244 8-95 (296)
157 TIGR02853 spore_dpaA dipicolin 97.7 0.00092 2E-08 59.7 12.8 94 164-268 150-244 (287)
158 PTZ00075 Adenosylhomocysteinas 97.7 0.00042 9.1E-09 65.2 11.0 92 162-267 251-344 (476)
159 PRK12829 short chain dehydroge 97.7 0.00073 1.6E-08 59.5 12.2 83 162-244 8-96 (264)
160 PF12847 Methyltransf_18: Meth 97.7 0.00028 6E-09 53.4 8.2 94 164-262 1-109 (112)
161 PRK07109 short chain dehydroge 97.7 0.001 2.2E-08 61.0 13.2 81 164-244 7-95 (334)
162 PRK00377 cbiT cobalt-precorrin 97.6 0.0019 4.2E-08 54.4 13.5 99 159-262 35-143 (198)
163 PRK06139 short chain dehydroge 97.6 0.00062 1.3E-08 62.3 10.9 80 164-243 6-93 (330)
164 KOG1205 Predicted dehydrogenas 97.6 0.00082 1.8E-08 59.1 11.1 105 164-268 11-153 (282)
165 PRK06200 2,3-dihydroxy-2,3-dih 97.6 0.00056 1.2E-08 60.3 10.3 80 164-243 5-89 (263)
166 PRK00045 hemA glutamyl-tRNA re 97.6 0.00036 7.8E-09 66.0 9.3 138 85-245 93-253 (423)
167 PRK06057 short chain dehydroge 97.6 0.00069 1.5E-08 59.4 10.6 81 164-244 6-89 (255)
168 PRK07060 short chain dehydroge 97.6 0.00083 1.8E-08 58.4 10.9 79 164-244 8-87 (245)
169 PRK08261 fabG 3-ketoacyl-(acyl 97.6 0.0016 3.4E-08 62.4 13.6 80 164-243 209-293 (450)
170 PRK07326 short chain dehydroge 97.6 0.0013 2.9E-08 56.8 12.1 81 164-244 5-92 (237)
171 PRK07825 short chain dehydroge 97.6 0.00067 1.4E-08 60.2 10.2 79 165-243 5-87 (273)
172 PRK06198 short chain dehydroge 97.5 0.0089 1.9E-07 52.5 17.2 81 164-244 5-94 (260)
173 PRK08267 short chain dehydroge 97.5 0.0014 3E-08 57.7 12.1 79 166-244 2-87 (260)
174 PRK08017 oxidoreductase; Provi 97.5 0.00056 1.2E-08 59.9 9.3 78 166-244 3-84 (256)
175 PRK12939 short chain dehydroge 97.5 0.0024 5.3E-08 55.6 13.2 81 164-244 6-94 (250)
176 PRK06484 short chain dehydroge 97.5 0.0015 3.4E-08 63.6 12.9 105 164-268 268-404 (520)
177 PF02826 2-Hacid_dh_C: D-isome 97.5 0.0016 3.4E-08 53.9 11.1 89 163-265 34-128 (178)
178 PRK07576 short chain dehydroge 97.5 0.00073 1.6E-08 59.7 9.8 80 164-243 8-95 (264)
179 PRK06196 oxidoreductase; Provi 97.5 0.00087 1.9E-08 60.9 10.4 80 164-243 25-108 (315)
180 PRK07806 short chain dehydroge 97.5 0.0017 3.6E-08 56.7 11.8 103 164-266 5-136 (248)
181 PRK08339 short chain dehydroge 97.5 0.0012 2.6E-08 58.3 10.9 81 164-244 7-95 (263)
182 TIGR03325 BphB_TodD cis-2,3-di 97.5 0.001 2.2E-08 58.6 10.4 80 164-243 4-88 (262)
183 PRK07453 protochlorophyllide o 97.5 0.0012 2.6E-08 60.2 10.8 80 164-243 5-92 (322)
184 PRK08177 short chain dehydroge 97.5 0.0008 1.7E-08 57.8 9.2 78 166-244 2-81 (225)
185 PRK07063 short chain dehydroge 97.5 0.0009 2E-08 58.9 9.7 80 164-243 6-95 (260)
186 PRK06500 short chain dehydroge 97.5 0.0013 2.8E-08 57.4 10.5 80 164-243 5-89 (249)
187 PRK07831 short chain dehydroge 97.4 0.0015 3.3E-08 57.5 11.0 83 162-244 14-107 (262)
188 PRK07832 short chain dehydroge 97.4 0.0039 8.5E-08 55.2 13.5 78 167-244 2-88 (272)
189 PRK07062 short chain dehydroge 97.4 0.0012 2.5E-08 58.4 10.0 80 164-243 7-96 (265)
190 PRK05866 short chain dehydroge 97.4 0.001 2.2E-08 59.8 9.6 81 164-244 39-127 (293)
191 PRK06949 short chain dehydroge 97.4 0.0011 2.5E-08 58.1 9.9 81 163-243 7-95 (258)
192 PRK05867 short chain dehydroge 97.4 0.0011 2.3E-08 58.2 9.5 80 164-243 8-95 (253)
193 PRK05854 short chain dehydroge 97.4 0.0013 2.8E-08 59.8 9.9 80 164-243 13-102 (313)
194 PRK11705 cyclopropane fatty ac 97.4 0.0021 4.6E-08 59.8 11.4 112 144-264 147-267 (383)
195 cd01078 NAD_bind_H4MPT_DH NADP 97.4 0.0049 1.1E-07 51.7 12.7 99 164-267 27-132 (194)
196 PRK07231 fabG 3-ketoacyl-(acyl 97.4 0.0014 3E-08 57.2 9.8 81 164-244 4-91 (251)
197 PRK08217 fabG 3-ketoacyl-(acyl 97.4 0.0017 3.6E-08 56.7 10.2 80 164-243 4-91 (253)
198 PRK06180 short chain dehydroge 97.4 0.0015 3.3E-08 58.1 10.0 81 164-244 3-88 (277)
199 PRK07814 short chain dehydroge 97.3 0.0017 3.7E-08 57.3 10.1 80 164-243 9-96 (263)
200 PRK06194 hypothetical protein; 97.3 0.0015 3.3E-08 58.3 9.9 80 165-244 6-93 (287)
201 PRK05876 short chain dehydroge 97.3 0.0017 3.7E-08 57.7 10.0 80 164-243 5-92 (275)
202 PRK07890 short chain dehydroge 97.3 0.0014 3.1E-08 57.4 9.4 80 164-243 4-91 (258)
203 PRK09186 flagellin modificatio 97.3 0.0019 4.1E-08 56.6 10.1 80 164-243 3-92 (256)
204 PRK07478 short chain dehydroge 97.3 0.0016 3.5E-08 57.0 9.6 80 164-243 5-92 (254)
205 PRK07523 gluconate 5-dehydroge 97.3 0.002 4.2E-08 56.6 10.1 81 164-244 9-97 (255)
206 PRK05884 short chain dehydroge 97.3 0.0021 4.6E-08 55.2 10.0 76 167-243 2-78 (223)
207 PRK06841 short chain dehydroge 97.3 0.0023 5E-08 56.0 10.5 80 164-244 14-99 (255)
208 PRK12828 short chain dehydroge 97.3 0.0021 4.5E-08 55.6 10.1 81 164-244 6-92 (239)
209 PRK05717 oxidoreductase; Valid 97.3 0.0022 4.8E-08 56.2 10.3 80 164-243 9-93 (255)
210 PRK07024 short chain dehydroge 97.3 0.0027 5.8E-08 55.8 10.6 79 165-243 2-87 (257)
211 PRK06953 short chain dehydroge 97.3 0.0024 5.2E-08 54.7 10.1 78 166-244 2-80 (222)
212 COG0686 Ald Alanine dehydrogen 97.3 0.0025 5.4E-08 55.9 9.7 97 166-268 169-272 (371)
213 PRK06128 oxidoreductase; Provi 97.3 0.0061 1.3E-07 54.9 13.0 104 164-268 54-195 (300)
214 PLN02253 xanthoxin dehydrogena 97.3 0.0026 5.7E-08 56.6 10.5 80 164-243 17-103 (280)
215 PRK07677 short chain dehydroge 97.3 0.002 4.4E-08 56.3 9.6 79 165-243 1-87 (252)
216 PRK06484 short chain dehydroge 97.3 0.0021 4.6E-08 62.7 10.6 81 164-244 4-89 (520)
217 PRK08643 acetoin reductase; Va 97.2 0.0021 4.7E-08 56.3 9.4 80 165-244 2-89 (256)
218 PRK06482 short chain dehydroge 97.2 0.0033 7.2E-08 55.8 10.5 79 166-244 3-86 (276)
219 PRK08594 enoyl-(acyl carrier p 97.2 0.0075 1.6E-07 53.0 12.6 80 164-243 6-96 (257)
220 PRK10538 malonic semialdehyde 97.2 0.0031 6.8E-08 55.0 10.1 77 167-243 2-83 (248)
221 COG2518 Pcm Protein-L-isoaspar 97.2 0.0017 3.6E-08 54.3 7.7 97 158-263 66-168 (209)
222 TIGR01035 hemA glutamyl-tRNA r 97.2 0.004 8.6E-08 58.8 11.3 140 86-245 92-251 (417)
223 PRK08589 short chain dehydroge 97.2 0.0028 6.2E-08 56.2 9.8 79 164-243 5-91 (272)
224 PRK07774 short chain dehydroge 97.2 0.0026 5.6E-08 55.5 9.5 80 164-243 5-92 (250)
225 PRK07067 sorbitol dehydrogenas 97.2 0.0033 7.1E-08 55.2 10.1 79 165-243 6-89 (257)
226 PLN02780 ketoreductase/ oxidor 97.2 0.0029 6.2E-08 57.7 9.9 80 164-243 52-141 (320)
227 PRK06197 short chain dehydroge 97.2 0.0026 5.6E-08 57.5 9.5 80 164-243 15-104 (306)
228 PRK09072 short chain dehydroge 97.2 0.0042 9E-08 54.8 10.7 81 164-244 4-90 (263)
229 PRK08340 glucose-1-dehydrogena 97.2 0.0031 6.6E-08 55.5 9.7 78 167-244 2-86 (259)
230 PRK09242 tropinone reductase; 97.2 0.0031 6.8E-08 55.3 9.8 81 164-244 8-98 (257)
231 PRK08862 short chain dehydroge 97.2 0.0021 4.5E-08 55.5 8.4 80 164-243 4-92 (227)
232 PRK07904 short chain dehydroge 97.2 0.0027 6E-08 55.7 9.3 83 162-244 5-97 (253)
233 CHL00194 ycf39 Ycf39; Provisio 97.2 0.0043 9.3E-08 56.4 10.9 94 167-266 2-111 (317)
234 PRK12429 3-hydroxybutyrate deh 97.2 0.0043 9.4E-08 54.3 10.5 80 164-243 3-90 (258)
235 PRK05875 short chain dehydroge 97.2 0.0041 8.9E-08 55.2 10.5 80 164-243 6-95 (276)
236 COG2230 Cfa Cyclopropane fatty 97.2 0.0026 5.7E-08 55.8 8.8 113 148-268 56-180 (283)
237 PRK06914 short chain dehydroge 97.2 0.0036 7.7E-08 55.7 10.1 79 165-244 3-91 (280)
238 PRK08213 gluconate 5-dehydroge 97.2 0.0036 7.9E-08 55.0 10.0 80 164-243 11-98 (259)
239 PRK06125 short chain dehydroge 97.1 0.0037 7.9E-08 55.0 10.0 78 164-243 6-90 (259)
240 PRK08703 short chain dehydroge 97.1 0.0045 9.7E-08 53.7 10.4 80 164-243 5-96 (239)
241 TIGR01289 LPOR light-dependent 97.1 0.0043 9.3E-08 56.3 10.6 79 165-243 3-90 (314)
242 PRK13940 glutamyl-tRNA reducta 97.1 0.0046 9.9E-08 58.1 10.8 74 163-245 179-253 (414)
243 PRK12823 benD 1,6-dihydroxycyc 97.1 0.0052 1.1E-07 54.0 10.7 79 164-243 7-93 (260)
244 PRK08415 enoyl-(acyl carrier p 97.1 0.0039 8.5E-08 55.4 10.0 105 164-268 4-147 (274)
245 PRK08263 short chain dehydroge 97.1 0.0049 1.1E-07 54.8 10.6 80 165-244 3-87 (275)
246 PRK06505 enoyl-(acyl carrier p 97.1 0.0046 9.9E-08 54.9 10.3 80 164-243 6-94 (271)
247 PRK07985 oxidoreductase; Provi 97.1 0.007 1.5E-07 54.4 11.6 105 164-268 48-189 (294)
248 PRK12367 short chain dehydroge 97.1 0.0026 5.7E-08 55.5 8.6 73 165-244 14-89 (245)
249 PRK06138 short chain dehydroge 97.1 0.0033 7.1E-08 54.9 9.3 81 164-244 4-91 (252)
250 PRK08251 short chain dehydroge 97.1 0.0039 8.5E-08 54.3 9.8 79 165-243 2-90 (248)
251 TIGR01832 kduD 2-deoxy-D-gluco 97.1 0.0035 7.5E-08 54.6 9.4 80 164-244 4-90 (248)
252 PRK06172 short chain dehydroge 97.1 0.004 8.7E-08 54.4 9.8 81 164-244 6-94 (253)
253 PRK07035 short chain dehydroge 97.1 0.0042 9.1E-08 54.3 9.9 79 165-243 8-94 (252)
254 TIGR00406 prmA ribosomal prote 97.1 0.0035 7.5E-08 56.2 9.4 96 162-266 157-261 (288)
255 PRK06179 short chain dehydroge 97.1 0.002 4.4E-08 57.0 7.9 77 165-244 4-83 (270)
256 PF02353 CMAS: Mycolic acid cy 97.1 0.001 2.3E-08 58.8 5.9 106 151-264 49-166 (273)
257 PRK07666 fabG 3-ketoacyl-(acyl 97.1 0.0041 8.9E-08 53.9 9.6 80 165-244 7-94 (239)
258 PRK06720 hypothetical protein; 97.1 0.0054 1.2E-07 50.2 9.7 80 164-243 15-102 (169)
259 PRK06079 enoyl-(acyl carrier p 97.1 0.0043 9.4E-08 54.4 9.8 79 164-243 6-92 (252)
260 PRK08261 fabG 3-ketoacyl-(acyl 97.1 0.00095 2.1E-08 63.9 6.0 94 159-267 28-126 (450)
261 PRK06181 short chain dehydroge 97.1 0.0041 8.8E-08 54.8 9.7 80 165-244 1-88 (263)
262 PRK06483 dihydromonapterin red 97.1 0.0044 9.5E-08 53.6 9.6 79 165-244 2-84 (236)
263 PRK09291 short chain dehydroge 97.1 0.0044 9.4E-08 54.3 9.7 75 165-243 2-82 (257)
264 TIGR03589 PseB UDP-N-acetylglu 97.1 0.077 1.7E-06 48.4 18.1 75 164-243 3-83 (324)
265 PRK13394 3-hydroxybutyrate deh 97.1 0.0046 9.9E-08 54.3 9.8 81 164-244 6-94 (262)
266 PRK07074 short chain dehydroge 97.1 0.0069 1.5E-07 53.1 10.9 80 165-244 2-87 (257)
267 COG2226 UbiE Methylase involve 97.1 0.0046 9.9E-08 53.2 9.2 105 159-268 46-160 (238)
268 PRK08277 D-mannonate oxidoredu 97.0 0.0051 1.1E-07 54.7 10.0 80 164-243 9-96 (278)
269 PRK08085 gluconate 5-dehydroge 97.0 0.0049 1.1E-07 54.0 9.7 80 164-243 8-95 (254)
270 COG1748 LYS9 Saccharopine dehy 97.0 0.0057 1.2E-07 56.4 10.3 95 166-267 2-102 (389)
271 PRK07454 short chain dehydroge 97.0 0.0059 1.3E-07 53.0 10.1 82 163-244 4-93 (241)
272 PF00670 AdoHcyase_NAD: S-aden 97.0 0.0061 1.3E-07 48.9 9.1 102 152-267 9-113 (162)
273 PRK12481 2-deoxy-D-gluconate 3 97.0 0.0065 1.4E-07 53.2 10.2 79 164-243 7-92 (251)
274 PRK13943 protein-L-isoaspartat 97.0 0.012 2.6E-07 53.3 11.8 100 158-263 74-179 (322)
275 PRK05653 fabG 3-ketoacyl-(acyl 97.0 0.0075 1.6E-07 52.2 10.3 81 164-244 4-92 (246)
276 PRK07533 enoyl-(acyl carrier p 97.0 0.008 1.7E-07 52.9 10.5 80 164-243 9-97 (258)
277 PRK06935 2-deoxy-D-gluconate 3 97.0 0.005 1.1E-07 54.0 9.1 79 164-243 14-100 (258)
278 PRK06603 enoyl-(acyl carrier p 97.0 0.0075 1.6E-07 53.1 10.2 80 164-243 7-95 (260)
279 PRK08159 enoyl-(acyl carrier p 97.0 0.0062 1.3E-07 54.1 9.7 81 163-243 8-97 (272)
280 COG2910 Putative NADH-flavin r 97.0 0.0049 1.1E-07 50.0 7.9 91 167-266 2-106 (211)
281 PRK08226 short chain dehydroge 96.9 0.008 1.7E-07 52.9 10.2 80 164-243 5-91 (263)
282 PRK12937 short chain dehydroge 96.9 0.022 4.9E-07 49.3 12.9 80 164-243 4-92 (245)
283 PF00106 adh_short: short chai 96.9 0.0038 8.2E-08 50.7 7.5 79 166-244 1-90 (167)
284 PF01262 AlaDh_PNT_C: Alanine 96.9 0.0041 8.9E-08 50.9 7.6 97 165-268 20-143 (168)
285 PRK06124 gluconate 5-dehydroge 96.9 0.0075 1.6E-07 52.8 9.8 81 164-244 10-98 (256)
286 PRK12936 3-ketoacyl-(acyl-carr 96.9 0.01 2.2E-07 51.5 10.6 80 164-243 5-89 (245)
287 PRK06113 7-alpha-hydroxysteroi 96.9 0.0079 1.7E-07 52.7 10.0 80 164-243 10-97 (255)
288 KOG1201 Hydroxysteroid 17-beta 96.9 0.0063 1.4E-07 53.4 8.9 80 163-243 36-123 (300)
289 PRK08628 short chain dehydroge 96.9 0.0051 1.1E-07 54.0 8.7 80 164-243 6-92 (258)
290 PRK12747 short chain dehydroge 96.9 0.013 2.9E-07 51.1 11.3 105 164-268 3-148 (252)
291 KOG0725 Reductases with broad 96.9 0.0052 1.1E-07 54.4 8.6 82 163-244 6-99 (270)
292 PRK12826 3-ketoacyl-(acyl-carr 96.9 0.0077 1.7E-07 52.4 9.6 81 164-244 5-93 (251)
293 PRK07424 bifunctional sterol d 96.9 0.0085 1.8E-07 56.1 10.2 75 164-243 177-254 (406)
294 PRK06398 aldose dehydrogenase; 96.9 0.0015 3.2E-08 57.6 4.9 75 164-243 5-81 (258)
295 PRK07889 enoyl-(acyl carrier p 96.9 0.0084 1.8E-07 52.7 9.7 80 164-243 6-94 (256)
296 KOG1014 17 beta-hydroxysteroid 96.9 0.0084 1.8E-07 52.8 9.4 81 163-244 47-136 (312)
297 PRK12384 sorbitol-6-phosphate 96.9 0.012 2.7E-07 51.5 10.8 79 165-243 2-90 (259)
298 PRK07791 short chain dehydroge 96.9 0.0072 1.6E-07 54.1 9.4 82 163-244 4-102 (286)
299 TIGR02469 CbiT precorrin-6Y C5 96.9 0.024 5.2E-07 43.3 11.2 100 159-263 14-121 (124)
300 COG2242 CobL Precorrin-6B meth 96.8 0.019 4E-07 47.1 10.6 100 159-264 29-135 (187)
301 PRK06101 short chain dehydroge 96.8 0.014 3E-07 50.7 10.7 77 166-243 2-80 (240)
302 PRK06463 fabG 3-ketoacyl-(acyl 96.8 0.011 2.4E-07 51.8 10.2 80 164-244 6-89 (255)
303 PRK07097 gluconate 5-dehydroge 96.8 0.0096 2.1E-07 52.5 9.8 81 164-244 9-97 (265)
304 PRK06114 short chain dehydroge 96.8 0.0092 2E-07 52.3 9.6 81 164-244 7-96 (254)
305 PRK08416 7-alpha-hydroxysteroi 96.8 0.0083 1.8E-07 52.8 9.3 80 164-243 7-96 (260)
306 PRK08945 putative oxoacyl-(acy 96.8 0.011 2.4E-07 51.4 10.1 82 162-243 9-101 (247)
307 PRK06940 short chain dehydroge 96.8 0.023 5E-07 50.5 12.2 101 165-267 2-128 (275)
308 KOG1209 1-Acyl dihydroxyaceton 96.8 0.01 2.2E-07 49.3 8.8 105 164-268 6-142 (289)
309 PRK05650 short chain dehydroge 96.8 0.01 2.2E-07 52.6 9.8 78 167-244 2-87 (270)
310 PRK08690 enoyl-(acyl carrier p 96.8 0.0088 1.9E-07 52.7 9.3 80 164-243 5-93 (261)
311 TIGR01963 PHB_DH 3-hydroxybuty 96.8 0.0081 1.8E-07 52.4 9.1 80 165-244 1-88 (255)
312 cd01080 NAD_bind_m-THF_DH_Cycl 96.8 0.016 3.5E-07 47.2 10.0 97 143-267 22-119 (168)
313 PRK07856 short chain dehydroge 96.8 0.0084 1.8E-07 52.4 9.1 75 164-243 5-84 (252)
314 TIGR03206 benzo_BadH 2-hydroxy 96.8 0.011 2.4E-07 51.4 9.8 80 164-243 2-89 (250)
315 KOG1210 Predicted 3-ketosphing 96.8 0.0083 1.8E-07 52.9 8.6 85 160-244 28-122 (331)
316 PRK07775 short chain dehydroge 96.8 0.015 3.3E-07 51.5 10.8 80 165-244 10-97 (274)
317 PRK00258 aroE shikimate 5-dehy 96.8 0.011 2.5E-07 52.6 9.9 110 148-265 105-222 (278)
318 TIGR00507 aroE shikimate 5-deh 96.8 0.02 4.3E-07 50.8 11.4 108 151-266 103-216 (270)
319 PRK08303 short chain dehydroge 96.8 0.0089 1.9E-07 54.0 9.3 80 164-243 7-105 (305)
320 PRK04148 hypothetical protein; 96.8 0.01 2.3E-07 46.0 8.2 83 163-254 15-98 (134)
321 PRK07984 enoyl-(acyl carrier p 96.8 0.013 2.8E-07 51.7 10.2 80 164-243 5-93 (262)
322 PRK08642 fabG 3-ketoacyl-(acyl 96.7 0.021 4.5E-07 49.8 11.1 79 165-243 5-90 (253)
323 PRK14175 bifunctional 5,10-met 96.7 0.02 4.2E-07 50.7 10.7 96 144-267 137-233 (286)
324 PRK08063 enoyl-(acyl carrier p 96.7 0.011 2.3E-07 51.6 9.1 80 164-243 3-91 (250)
325 PRK09134 short chain dehydroge 96.7 0.019 4E-07 50.4 10.6 80 164-243 8-96 (258)
326 PLN02476 O-methyltransferase 96.7 0.031 6.6E-07 49.4 11.6 102 159-263 113-227 (278)
327 TIGR02632 RhaD_aldol-ADH rhamn 96.7 0.01 2.2E-07 59.7 9.9 81 164-244 413-503 (676)
328 PRK06997 enoyl-(acyl carrier p 96.7 0.011 2.5E-07 52.0 9.2 80 164-243 5-93 (260)
329 PRK12743 oxidoreductase; Provi 96.7 0.017 3.6E-07 50.7 10.2 79 165-243 2-89 (256)
330 TIGR02415 23BDH acetoin reduct 96.7 0.014 3E-07 51.0 9.7 79 166-244 1-87 (254)
331 PF01135 PCMT: Protein-L-isoas 96.7 0.0074 1.6E-07 51.1 7.5 100 157-263 65-171 (209)
332 PRK09135 pteridine reductase; 96.7 0.015 3.3E-07 50.5 9.8 80 164-243 5-94 (249)
333 PRK08993 2-deoxy-D-gluconate 3 96.7 0.015 3.2E-07 50.9 9.8 79 164-243 9-94 (253)
334 TIGR01829 AcAcCoA_reduct aceto 96.7 0.013 2.8E-07 50.7 9.4 78 166-243 1-87 (242)
335 COG4122 Predicted O-methyltran 96.7 0.035 7.6E-07 47.1 11.4 106 158-265 53-167 (219)
336 PLN00141 Tic62-NAD(P)-related 96.7 0.01 2.2E-07 52.0 8.7 101 164-267 16-134 (251)
337 PRK07069 short chain dehydroge 96.7 0.013 2.9E-07 51.0 9.4 77 167-243 1-88 (251)
338 COG2519 GCD14 tRNA(1-methylade 96.7 0.027 5.8E-07 48.4 10.6 102 158-265 88-196 (256)
339 PRK06077 fabG 3-ketoacyl-(acyl 96.7 0.052 1.1E-06 47.3 13.1 103 165-268 6-144 (252)
340 KOG1208 Dehydrogenases with di 96.7 0.014 3.1E-07 52.7 9.5 80 163-243 33-123 (314)
341 PRK08264 short chain dehydroge 96.6 0.011 2.3E-07 51.2 8.6 75 164-244 5-83 (238)
342 PRK08309 short chain dehydroge 96.6 0.23 4.9E-06 41.0 15.9 90 167-257 2-98 (177)
343 PRK12746 short chain dehydroge 96.6 0.017 3.7E-07 50.5 10.0 80 165-244 6-100 (254)
344 PRK08220 2,3-dihydroxybenzoate 96.6 0.037 7.9E-07 48.2 12.0 75 164-244 7-86 (252)
345 PRK07577 short chain dehydroge 96.6 0.0095 2.1E-07 51.3 8.2 75 165-244 3-78 (234)
346 PRK08219 short chain dehydroge 96.6 0.019 4.1E-07 49.1 10.0 77 165-244 3-81 (227)
347 PLN00015 protochlorophyllide r 96.6 0.014 3.1E-07 52.8 9.5 75 169-243 1-84 (308)
348 PRK06523 short chain dehydroge 96.6 0.0071 1.5E-07 53.1 7.4 76 164-243 8-86 (260)
349 TIGR02622 CDP_4_6_dhtase CDP-g 96.6 0.011 2.5E-07 54.4 9.0 77 164-243 3-84 (349)
350 COG0169 AroE Shikimate 5-dehyd 96.6 0.02 4.2E-07 50.8 10.0 107 150-265 109-227 (283)
351 TIGR00438 rrmJ cell division p 96.6 0.054 1.2E-06 45.1 12.3 97 159-264 27-146 (188)
352 PRK12549 shikimate 5-dehydroge 96.6 0.026 5.6E-07 50.4 10.9 94 163-265 125-228 (284)
353 PRK08618 ornithine cyclodeamin 96.6 0.015 3.3E-07 53.0 9.6 95 163-268 125-225 (325)
354 PRK05565 fabG 3-ketoacyl-(acyl 96.6 0.014 2.9E-07 50.7 9.0 80 165-244 5-93 (247)
355 PRK05599 hypothetical protein; 96.6 0.013 2.8E-07 51.1 8.8 77 167-244 2-87 (246)
356 COG0373 HemA Glutamyl-tRNA red 96.6 0.044 9.5E-07 51.0 12.4 94 163-266 176-276 (414)
357 KOG1252 Cystathionine beta-syn 96.6 0.51 1.1E-05 42.3 18.5 56 159-215 97-155 (362)
358 PRK12938 acetyacetyl-CoA reduc 96.6 0.013 2.7E-07 51.0 8.6 81 164-244 2-91 (246)
359 PRK12548 shikimate 5-dehydroge 96.6 0.026 5.7E-07 50.5 10.7 46 163-209 124-173 (289)
360 PLN02781 Probable caffeoyl-CoA 96.6 0.036 7.7E-07 48.0 11.2 104 158-264 62-178 (234)
361 PRK13942 protein-L-isoaspartat 96.6 0.015 3.2E-07 49.6 8.7 100 158-263 70-175 (212)
362 PRK00811 spermidine synthase; 96.6 0.025 5.4E-07 50.5 10.4 97 163-263 75-190 (283)
363 PRK00107 gidB 16S rRNA methylt 96.6 0.033 7.1E-07 46.4 10.4 96 161-263 42-144 (187)
364 PLN02366 spermidine synthase 96.6 0.026 5.7E-07 50.8 10.5 99 162-263 89-205 (308)
365 COG2227 UbiG 2-polyprenyl-3-me 96.5 0.033 7.2E-07 47.4 10.4 94 163-263 58-160 (243)
366 PRK05557 fabG 3-ketoacyl-(acyl 96.5 0.025 5.4E-07 49.0 10.2 81 164-244 4-93 (248)
367 PRK08278 short chain dehydroge 96.5 0.015 3.3E-07 51.5 8.9 81 164-244 5-100 (273)
368 PRK07370 enoyl-(acyl carrier p 96.5 0.016 3.5E-07 50.9 9.0 105 164-268 5-151 (258)
369 TIGR01809 Shik-DH-AROM shikima 96.5 0.026 5.7E-07 50.3 10.2 75 164-244 124-200 (282)
370 PRK07102 short chain dehydroge 96.5 0.018 3.9E-07 50.0 9.0 77 166-243 2-85 (243)
371 PRK08936 glucose-1-dehydrogena 96.5 0.025 5.4E-07 49.7 10.0 81 164-244 6-95 (261)
372 PRK13944 protein-L-isoaspartat 96.5 0.03 6.5E-07 47.4 10.0 101 158-263 66-172 (205)
373 KOG1502 Flavonol reductase/cin 96.5 0.016 3.4E-07 52.0 8.5 74 164-243 5-87 (327)
374 PRK12550 shikimate 5-dehydroge 96.5 0.034 7.3E-07 49.2 10.5 78 151-243 109-187 (272)
375 cd01065 NAD_bind_Shikimate_DH 96.5 0.031 6.7E-07 44.9 9.6 95 163-266 17-118 (155)
376 PRK06718 precorrin-2 dehydroge 96.5 0.023 5.1E-07 47.9 9.1 92 164-265 9-101 (202)
377 PRK03369 murD UDP-N-acetylmura 96.5 0.014 2.9E-07 56.5 8.7 73 162-245 9-81 (488)
378 PRK07201 short chain dehydroge 96.5 0.019 4.2E-07 57.7 10.2 79 165-243 371-457 (657)
379 TIGR01470 cysG_Nterm siroheme 96.5 0.043 9.4E-07 46.4 10.7 92 164-265 8-101 (205)
380 PRK06719 precorrin-2 dehydroge 96.4 0.074 1.6E-06 42.9 11.5 88 164-263 12-99 (157)
381 PRK05855 short chain dehydroge 96.4 0.017 3.6E-07 57.1 9.5 81 164-244 314-402 (582)
382 PF02670 DXP_reductoisom: 1-de 96.4 0.11 2.4E-06 40.1 11.9 93 168-262 1-119 (129)
383 PF05368 NmrA: NmrA-like famil 96.4 0.026 5.7E-07 48.7 9.6 70 168-243 1-73 (233)
384 PRK05447 1-deoxy-D-xylulose 5- 96.4 0.06 1.3E-06 49.6 12.0 96 166-263 2-121 (385)
385 PRK14027 quinate/shikimate deh 96.4 0.057 1.2E-06 48.1 11.7 46 163-209 125-171 (283)
386 PRK14189 bifunctional 5,10-met 96.4 0.033 7.1E-07 49.3 9.9 97 144-267 137-233 (285)
387 PRK15469 ghrA bifunctional gly 96.4 0.034 7.4E-07 50.3 10.4 89 164-267 135-229 (312)
388 PRK06171 sorbitol-6-phosphate 96.4 0.0091 2E-07 52.7 6.7 76 164-243 8-86 (266)
389 PLN02657 3,8-divinyl protochlo 96.4 0.035 7.6E-07 52.1 10.8 107 160-267 55-184 (390)
390 PRK06701 short chain dehydroge 96.4 0.03 6.5E-07 50.2 9.8 80 164-243 45-133 (290)
391 KOG1200 Mitochondrial/plastidi 96.3 0.028 6E-07 46.2 8.4 79 165-243 14-99 (256)
392 PF08704 GCD14: tRNA methyltra 96.3 0.017 3.8E-07 50.0 7.7 107 156-265 32-147 (247)
393 PF03807 F420_oxidored: NADP o 96.3 0.12 2.5E-06 37.7 11.0 86 167-263 1-93 (96)
394 PRK14191 bifunctional 5,10-met 96.3 0.061 1.3E-06 47.6 10.9 97 144-267 136-232 (285)
395 PRK01581 speE spermidine synth 96.3 0.078 1.7E-06 48.5 11.8 97 163-264 149-268 (374)
396 TIGR02685 pter_reduc_Leis pter 96.3 0.03 6.5E-07 49.4 9.3 78 166-243 2-93 (267)
397 PLN03139 formate dehydrogenase 96.3 0.062 1.4E-06 49.9 11.5 91 164-267 198-294 (386)
398 PRK07402 precorrin-6B methylas 96.3 0.21 4.5E-06 41.9 13.9 105 157-265 33-143 (196)
399 PRK06123 short chain dehydroge 96.3 0.052 1.1E-06 47.1 10.6 80 165-244 2-90 (248)
400 TIGR00080 pimt protein-L-isoas 96.2 0.049 1.1E-06 46.5 10.1 100 158-263 71-176 (215)
401 PTZ00098 phosphoethanolamine N 96.2 0.064 1.4E-06 47.3 11.1 107 154-265 42-157 (263)
402 PRK07792 fabG 3-ketoacyl-(acyl 96.2 0.029 6.3E-07 50.7 9.1 81 164-244 11-99 (306)
403 PRK11207 tellurite resistance 96.2 0.028 6.1E-07 47.3 8.4 98 159-265 25-135 (197)
404 PRK04457 spermidine synthase; 96.2 0.15 3.2E-06 45.0 13.2 96 163-262 65-175 (262)
405 KOG1199 Short-chain alcohol de 96.2 0.031 6.7E-07 44.8 7.8 82 163-244 7-93 (260)
406 PRK09730 putative NAD(P)-bindi 96.2 0.037 8E-07 48.0 9.3 79 166-244 2-89 (247)
407 PRK12745 3-ketoacyl-(acyl-carr 96.2 0.046 1E-06 47.7 10.0 79 166-244 3-90 (256)
408 PF03435 Saccharop_dh: Sacchar 96.2 0.041 8.8E-07 51.6 10.1 90 168-263 1-97 (386)
409 TIGR03649 ergot_EASG ergot alk 96.2 0.032 7E-07 49.8 9.0 95 167-265 1-105 (285)
410 PLN02989 cinnamyl-alcohol dehy 96.2 0.024 5.2E-07 51.6 8.4 76 163-243 3-86 (325)
411 PRK10258 biotin biosynthesis p 96.2 0.61 1.3E-05 40.7 17.0 95 162-265 40-141 (251)
412 PLN02589 caffeoyl-CoA O-methyl 96.2 0.092 2E-06 45.7 11.4 101 159-262 74-188 (247)
413 PF01596 Methyltransf_3: O-met 96.2 0.017 3.6E-07 48.8 6.6 104 159-265 40-156 (205)
414 PRK12935 acetoacetyl-CoA reduc 96.2 0.047 1E-06 47.4 9.8 80 165-244 6-94 (247)
415 KOG4169 15-hydroxyprostaglandi 96.2 0.02 4.4E-07 48.2 6.8 103 165-268 5-140 (261)
416 PRK07574 formate dehydrogenase 96.1 0.08 1.7E-06 49.2 11.6 91 164-267 191-287 (385)
417 PF13241 NAD_binding_7: Putati 96.1 0.011 2.5E-07 44.0 4.9 88 164-267 6-94 (103)
418 PLN02986 cinnamyl-alcohol dehy 96.1 0.03 6.5E-07 50.9 8.6 75 164-243 4-86 (322)
419 PLN03075 nicotianamine synthas 96.1 0.059 1.3E-06 48.0 10.0 96 164-263 123-232 (296)
420 PRK13243 glyoxylate reductase; 96.1 0.079 1.7E-06 48.5 11.3 89 164-267 149-243 (333)
421 COG1179 Dinucleotide-utilizing 96.1 0.096 2.1E-06 44.6 10.6 102 164-266 29-155 (263)
422 PRK07502 cyclohexadienyl dehyd 96.1 0.064 1.4E-06 48.5 10.6 89 166-265 7-101 (307)
423 PRK12744 short chain dehydroge 96.1 0.042 9.1E-07 48.1 9.2 81 164-244 7-99 (257)
424 cd05212 NAD_bind_m-THF_DH_Cycl 96.1 0.068 1.5E-06 42.1 9.3 97 144-267 7-103 (140)
425 PRK07041 short chain dehydroge 96.1 0.04 8.7E-07 47.3 8.9 74 169-244 1-79 (230)
426 PRK07578 short chain dehydroge 96.1 0.085 1.8E-06 44.2 10.6 63 167-243 2-64 (199)
427 COG1091 RfbD dTDP-4-dehydrorha 96.0 0.66 1.4E-05 41.0 16.1 156 167-343 2-198 (281)
428 PRK14192 bifunctional 5,10-met 96.0 0.075 1.6E-06 47.3 10.5 79 162-267 156-234 (283)
429 TIGR03840 TMPT_Se_Te thiopurin 96.0 0.081 1.8E-06 45.0 10.3 99 163-266 33-154 (213)
430 PLN00203 glutamyl-tRNA reducta 96.0 0.12 2.7E-06 49.9 12.7 74 165-245 266-340 (519)
431 PRK13656 trans-2-enoyl-CoA red 96.0 0.05 1.1E-06 50.1 9.5 81 163-245 39-142 (398)
432 PRK12827 short chain dehydroge 96.0 0.052 1.1E-06 47.1 9.5 80 165-244 6-97 (249)
433 PRK06947 glucose-1-dehydrogena 96.0 0.051 1.1E-06 47.2 9.4 78 166-243 3-89 (248)
434 PRK07023 short chain dehydroge 96.0 0.05 1.1E-06 47.2 9.0 75 167-243 3-86 (243)
435 PLN02928 oxidoreductase family 95.9 0.11 2.4E-06 47.8 11.5 95 164-266 158-264 (347)
436 PRK12824 acetoacetyl-CoA reduc 95.9 0.079 1.7E-06 45.8 10.2 78 166-243 3-89 (245)
437 PRK12749 quinate/shikimate deh 95.9 0.085 1.8E-06 47.1 10.4 77 164-243 123-205 (288)
438 PRK11036 putative S-adenosyl-L 95.9 0.14 3E-06 45.0 11.8 97 163-264 43-149 (255)
439 PRK08317 hypothetical protein; 95.9 0.084 1.8E-06 45.5 10.3 103 158-265 13-125 (241)
440 PLN02730 enoyl-[acyl-carrier-p 95.9 0.047 1E-06 49.2 8.7 40 164-204 8-49 (303)
441 PRK12825 fabG 3-ketoacyl-(acyl 95.9 0.054 1.2E-06 46.8 9.0 79 165-243 6-93 (249)
442 PRK07066 3-hydroxybutyryl-CoA 95.9 0.71 1.5E-05 41.9 16.2 89 166-263 8-117 (321)
443 PF02254 TrkA_N: TrkA-N domain 95.9 0.19 4E-06 38.0 10.9 91 168-263 1-95 (116)
444 PLN00016 RNA-binding protein; 95.9 0.062 1.3E-06 50.2 9.9 96 165-266 52-166 (378)
445 PF02719 Polysacc_synt_2: Poly 95.9 0.035 7.5E-07 49.2 7.6 73 168-244 1-87 (293)
446 PRK10792 bifunctional 5,10-met 95.9 0.086 1.9E-06 46.6 9.9 96 144-266 138-233 (285)
447 cd05311 NAD_bind_2_malic_enz N 95.9 0.1 2.2E-06 44.9 10.3 99 154-264 14-128 (226)
448 PRK08655 prephenate dehydrogen 95.9 0.096 2.1E-06 49.8 11.0 88 167-265 2-93 (437)
449 PLN02896 cinnamyl-alcohol dehy 95.9 0.058 1.3E-06 49.8 9.4 77 162-243 7-88 (353)
450 PRK14982 acyl-ACP reductase; P 95.8 0.071 1.5E-06 48.5 9.5 95 163-268 153-250 (340)
451 PLN02686 cinnamoyl-CoA reducta 95.8 0.062 1.3E-06 50.0 9.5 44 163-206 51-94 (367)
452 COG1052 LdhA Lactate dehydroge 95.8 0.14 3E-06 46.5 11.4 89 164-267 145-239 (324)
453 PF01370 Epimerase: NAD depend 95.8 0.049 1.1E-06 46.8 8.2 74 168-244 1-75 (236)
454 PRK15181 Vi polysaccharide bio 95.8 0.052 1.1E-06 50.1 8.7 49 151-200 2-50 (348)
455 PRK14194 bifunctional 5,10-met 95.8 0.093 2E-06 46.8 9.8 96 144-267 138-234 (301)
456 PRK14967 putative methyltransf 95.8 0.25 5.3E-06 42.4 12.3 95 160-263 32-158 (223)
457 PF02882 THF_DHG_CYH_C: Tetrah 95.7 0.071 1.5E-06 43.0 8.2 99 143-268 14-112 (160)
458 PRK12748 3-ketoacyl-(acyl-carr 95.7 0.079 1.7E-06 46.4 9.4 80 164-243 4-104 (256)
459 TIGR01500 sepiapter_red sepiap 95.7 0.074 1.6E-06 46.6 9.2 43 167-209 2-48 (256)
460 COG3288 PntA NAD/NADP transhyd 95.7 0.23 5E-06 43.9 11.6 128 162-296 161-308 (356)
461 PRK14188 bifunctional 5,10-met 95.7 0.1 2.3E-06 46.5 9.9 95 144-267 137-233 (296)
462 PLN02244 tocopherol O-methyltr 95.7 0.089 1.9E-06 48.3 9.9 98 163-265 117-224 (340)
463 COG0031 CysK Cysteine synthase 95.7 0.37 8.1E-06 42.9 13.2 55 159-215 56-113 (300)
464 PF02737 3HCDH_N: 3-hydroxyacy 95.7 0.99 2.2E-05 37.3 15.1 39 167-206 1-39 (180)
465 KOG3201 Uncharacterized conser 95.7 0.069 1.5E-06 42.5 7.5 121 143-265 9-141 (201)
466 PF01408 GFO_IDH_MocA: Oxidore 95.7 0.29 6.3E-06 37.2 11.2 89 167-266 2-94 (120)
467 PLN02653 GDP-mannose 4,6-dehyd 95.6 0.043 9.3E-07 50.3 7.6 77 164-243 5-92 (340)
468 PLN02427 UDP-apiose/xylose syn 95.6 0.06 1.3E-06 50.4 8.6 77 161-243 10-95 (386)
469 PRK07340 ornithine cyclodeamin 95.6 0.11 2.4E-06 46.8 9.9 94 163-268 123-221 (304)
470 PRK05562 precorrin-2 dehydroge 95.6 0.17 3.6E-06 43.2 10.2 92 164-265 24-117 (223)
471 PRK00536 speE spermidine synth 95.6 0.05 1.1E-06 47.6 7.2 98 163-264 71-171 (262)
472 PRK13255 thiopurine S-methyltr 95.5 0.23 5E-06 42.4 11.1 98 161-263 34-154 (218)
473 PRK08287 cobalt-precorrin-6Y C 95.5 0.35 7.6E-06 40.2 12.1 98 158-263 25-130 (187)
474 PRK14169 bifunctional 5,10-met 95.5 0.15 3.3E-06 45.0 10.1 97 144-267 135-231 (282)
475 cd00755 YgdL_like Family of ac 95.5 0.39 8.4E-06 41.4 12.5 33 165-198 11-44 (231)
476 PRK14173 bifunctional 5,10-met 95.5 0.14 2.9E-06 45.4 9.8 96 145-267 135-230 (287)
477 PF06325 PrmA: Ribosomal prote 95.5 0.088 1.9E-06 47.0 8.8 97 162-268 159-263 (295)
478 PF10727 Rossmann-like: Rossma 95.5 0.052 1.1E-06 42.0 6.4 81 165-257 10-91 (127)
479 PRK01683 trans-aconitate 2-met 95.5 0.28 6.1E-06 43.0 12.0 96 159-263 26-129 (258)
480 PF01209 Ubie_methyltran: ubiE 95.5 0.072 1.6E-06 46.0 8.0 102 159-268 42-157 (233)
481 TIGR01472 gmd GDP-mannose 4,6- 95.5 0.086 1.9E-06 48.4 9.0 35 166-200 1-35 (343)
482 PLN02662 cinnamyl-alcohol dehy 95.5 0.067 1.4E-06 48.6 8.2 38 164-201 3-40 (322)
483 PRK06924 short chain dehydroge 95.5 0.11 2.3E-06 45.3 9.2 41 166-206 2-43 (251)
484 PRK12859 3-ketoacyl-(acyl-carr 95.5 0.12 2.6E-06 45.3 9.5 79 164-243 5-105 (256)
485 PLN02214 cinnamoyl-CoA reducta 95.5 0.092 2E-06 48.3 9.2 76 163-244 8-91 (342)
486 PRK06436 glycerate dehydrogena 95.5 0.16 3.4E-06 45.8 10.3 86 164-267 121-212 (303)
487 TIGR02992 ectoine_eutC ectoine 95.5 0.11 2.4E-06 47.4 9.5 93 163-267 127-227 (326)
488 PRK14176 bifunctional 5,10-met 95.5 0.13 2.9E-06 45.4 9.6 96 144-266 143-238 (287)
489 PRK14103 trans-aconitate 2-met 95.5 0.34 7.5E-06 42.4 12.4 95 158-263 23-125 (255)
490 PRK14172 bifunctional 5,10-met 95.5 0.12 2.7E-06 45.5 9.3 96 145-267 138-233 (278)
491 KOG1610 Corticosteroid 11-beta 95.4 0.43 9.4E-06 42.4 12.4 106 163-268 27-168 (322)
492 PLN02233 ubiquinone biosynthes 95.4 0.091 2E-06 46.3 8.5 101 159-266 68-184 (261)
493 PF03446 NAD_binding_2: NAD bi 95.4 0.14 3.1E-06 41.5 9.1 89 166-267 2-97 (163)
494 PRK12480 D-lactate dehydrogena 95.4 0.51 1.1E-05 43.1 13.5 86 164-266 145-236 (330)
495 PRK14190 bifunctional 5,10-met 95.4 0.18 3.9E-06 44.7 10.0 97 144-267 137-233 (284)
496 TIGR01830 3oxo_ACP_reduc 3-oxo 95.4 0.11 2.3E-06 44.8 8.8 77 168-244 1-86 (239)
497 TIGR00477 tehB tellurite resis 95.4 0.087 1.9E-06 44.2 7.9 99 158-265 24-134 (195)
498 COG1028 FabG Dehydrogenases wi 95.3 0.16 3.4E-06 44.2 9.9 81 164-244 4-96 (251)
499 TIGR01831 fabG_rel 3-oxoacyl-( 95.3 0.11 2.3E-06 44.9 8.7 76 168-243 1-85 (239)
500 COG0111 SerA Phosphoglycerate 95.3 0.19 4.1E-06 45.7 10.4 87 165-266 142-235 (324)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=5.7e-54 Score=378.19 Aligned_cols=306 Identities=20% Similarity=0.239 Sum_probs=271.7
Q ss_pred eeeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeE
Q 042784 11 VESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFG 90 (356)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G 90 (356)
.+|||+.+.++. +++++++++. |+|+++||+|||+++|+|++|+|..+|.+... ..|+++|| |..|
T Consensus 2 ~~mkA~~~~~~~-------~pl~i~e~~~----p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~-~~P~ipGH--EivG 67 (339)
T COG1064 2 MTMKAAVLKKFG-------QPLEIEEVPV----PEPGPGEVLIKVEACGVCHTDLHVAKGDWPVP-KLPLIPGH--EIVG 67 (339)
T ss_pred cceEEEEEccCC-------CCceEEeccC----CCCCCCeEEEEEEEEeecchhhhhhcCCCCCC-CCCccCCc--ceEE
Confidence 468999999874 4489999866 89999999999999999999999999866544 34555554 8999
Q ss_pred EEEEeccCCCCCCCCCEEEec------------------------------cCCeeeEEeecCCcccccCCCCCCCCccc
Q 042784 91 IARVIRSKDSKYSDGDIVLRA------------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPD 140 (356)
Q Consensus 91 ~v~~vg~~v~~~~~Gd~V~~~------------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~ 140 (356)
+|.++|++|++||+||||.++ +|+|+||+++++.+++++ |++++++.
T Consensus 68 ~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~i---P~~~d~~~ 144 (339)
T COG1064 68 TVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKI---PEGLDLAE 144 (339)
T ss_pred EEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEEC---CCCCChhh
Confidence 999999999999999999972 399999999999998665 99999999
Q ss_pred cccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCCh
Q 042784 141 YLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSE 220 (356)
Q Consensus 141 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~ 220 (356)
||.+.|++.|+|++|. ..+++||++|+|+|+ |++|.+++|+||++|++|+++++++++.++++ +||++++++.++
T Consensus 145 -aApllCaGiT~y~alk-~~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~lGAd~~i~~~~- 219 (339)
T COG1064 145 -AAPLLCAGITTYRALK-KANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSSD- 219 (339)
T ss_pred -hhhhhcCeeeEeeehh-hcCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-HhCCcEEEEcCC-
Confidence 8999999999999997 599999999999998 89999999999999999999999999999999 999999999875
Q ss_pred hhHHHHHHHHCCCCceEEEECCchhhHHHHHHhcccCCEEEEEeccc-ccccccccccchhhhhhhhccceEEEEEeccc
Q 042784 221 MSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMIS-QYNKVWTERDGVRNLLNMIGKEVKMEGFMIGS 299 (356)
Q Consensus 221 ~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (356)
.+..+.+++. +|++||+++...++.+++.|+++|+++.+|... . +....+...++.+++++.|+..++
T Consensus 220 ~~~~~~~~~~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~-------~~~~~~~~~li~~~~~i~GS~~g~ 288 (339)
T COG1064 220 SDALEAVKEI----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGG-------PIPLLPAFLLILKEISIVGSLVGT 288 (339)
T ss_pred chhhHHhHhh----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCCc-------ccCCCCHHHhhhcCeEEEEEecCC
Confidence 6777777663 999999999669999999999999999999974 2 123346677889999999998887
Q ss_pred ccchHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEEec
Q 042784 300 HMDRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQVK 354 (356)
Q Consensus 300 ~~~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 354 (356)
. .++++++++..+|+++|.+...++++|+++||+.|.+++..|+.||++.
T Consensus 289 ~-----~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 289 R-----ADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred H-----HHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 4 5689999999999999999879999999999999999999999999875
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=6.9e-52 Score=374.08 Aligned_cols=318 Identities=27% Similarity=0.369 Sum_probs=270.0
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
|+++.+..+ ++++.+++++++. |.|+++||||||+++++|+.|...+.|. .....++|...|.|++|+|
T Consensus 1 mka~~~~~~-----g~~~~l~~~e~~~----P~p~~geVlVrV~a~gvN~~D~~~r~G~--~~~~~~~P~i~G~d~aG~V 69 (326)
T COG0604 1 MKAVVVEEF-----GGPEVLKVVEVPE----PEPGPGEVLVRVKAAGVNPIDVLVRQGL--APPVRPLPFIPGSEAAGVV 69 (326)
T ss_pred CeEEEEecc-----CCCceeEEEecCC----CCCCCCeEEEEEEEeecChHHHHhccCC--CCCCCCCCCcccceeEEEE
Confidence 567777765 4556688888855 8899999999999999999999999975 2223345666667999999
Q ss_pred EEeccCCCCCCCCCEEEec-----cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCE
Q 042784 93 RVIRSKDSKYSDGDIVLRA-----FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSN 167 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~-----~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 167 (356)
+++|++|++|++||||+.. .|+|+||+++|++.++++ |+++|+++ ||+++++++|||+++....++++|++
T Consensus 70 ~avG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~---P~~ls~~e-AAal~~~~~TA~~~l~~~~~l~~g~~ 145 (326)
T COG0604 70 VAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPL---PDGLSFEE-AAALPLAGLTAWLALFDRAGLKPGET 145 (326)
T ss_pred EEeCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHHceeC---CCCCCHHH-HHHHHHHHHHHHHHHHHhcCCCCCCE
Confidence 9999999999999999943 489999999999999666 99999999 89999999999999999899999999
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCC-CceEEEECCchhh
Q 042784 168 VFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPN-GIDVYLDNVGGKM 246 (356)
Q Consensus 168 VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~ 246 (356)
|||+||+|++|.+++||||++|+++++++.++++.++++ ++|++++++|++ .++.+.+++++++ ++|+|+|++|++.
T Consensus 146 VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~-~lGAd~vi~y~~-~~~~~~v~~~t~g~gvDvv~D~vG~~~ 223 (326)
T COG0604 146 VLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK-ELGADHVINYRE-EDFVEQVRELTGGKGVDVVLDTVGGDT 223 (326)
T ss_pred EEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-hcCCCEEEcCCc-ccHHHHHHHHcCCCCceEEEECCCHHH
Confidence 999999999999999999999987777777888888888 999999999998 7799999999966 8999999999999
Q ss_pred HHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccc-cchHHHHHHHHHHHHHcCCeeeeee
Q 042784 247 LEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSH-MDRFADFTVEMESYIKEGKIRSKHV 325 (356)
Q Consensus 247 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~g~i~~~~~ 325 (356)
+..++++|+++|+++.+|..++ . .....+...++.+.++..+...... .+...+.++++.+++.+|.+++.++
T Consensus 224 ~~~~l~~l~~~G~lv~ig~~~g-~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~ 297 (326)
T COG0604 224 FAASLAALAPGGRLVSIGALSG-G-----PPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVID 297 (326)
T ss_pred HHHHHHHhccCCEEEEEecCCC-C-----CccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceec
Confidence 9999999999999999999773 1 1122346667778888888766532 2445678899999999999999999
Q ss_pred EEeChhhHHHHHHHHHc-CCCcceEEEEe
Q 042784 326 IYYGVESFLESLGSLFS-SSNIGKVVIQV 353 (356)
Q Consensus 326 ~~~~~~~~~~a~~~~~~-~~~~gkvvi~~ 353 (356)
.+|||++..++..+... ++..||+|+++
T Consensus 298 ~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 298 RVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred cEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 99999996555554433 58899999974
No 3
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2.5e-50 Score=331.46 Aligned_cols=318 Identities=18% Similarity=0.242 Sum_probs=275.0
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
.+-+++..+ ++.+.+++++.|+ |+|.|+|++||-.|+|+|..|.-.+.|-+. ..+.|+.+|.|.+|+|
T Consensus 9 ~k~i~v~e~-----Ggydvlk~ed~pv----~~papgel~iknka~GlNfid~y~RkGlY~---~~plPytpGmEaaGvV 76 (336)
T KOG1197|consen 9 LKCIVVTEF-----GGYDVLKLEDRPV----PPPAPGELTIKNKACGLNFIDLYFRKGLYD---PAPLPYTPGMEAAGVV 76 (336)
T ss_pred heEEEEecc-----CCcceEEEeeecC----CCCCCCceEEeehhcCccHHHHHHhccccC---CCCCCcCCCcccceEE
Confidence 556666665 6789999999977 889999999999999999999998886543 4455555556999999
Q ss_pred EEeccCCCCCCCCCEEEe--ccCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEE
Q 042784 93 RVIRSKDSKYSDGDIVLR--AFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFV 170 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~--~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV 170 (356)
+.+|++++++++||||++ .+|.|+|+..+|...++.. |+.++++. ||++...++|||..+++..++++|++|||
T Consensus 77 vAvG~gvtdrkvGDrVayl~~~g~yaee~~vP~~kv~~v---pe~i~~k~-aaa~llq~lTAy~ll~e~y~vkpGhtVlv 152 (336)
T KOG1197|consen 77 VAVGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVKVFKV---PEAITLKE-AAALLLQGLTAYMLLFEAYNVKPGHTVLV 152 (336)
T ss_pred EEecCCccccccccEEEEeccchhhheeccccceeeccC---CcccCHHH-HHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 999999999999999995 4699999999999888554 99999999 78999999999999999999999999999
Q ss_pred EcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHC-CCCceEEEECCchhhHHH
Q 042784 171 SAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYF-PNGIDVYLDNVGGKMLEA 249 (356)
Q Consensus 171 ~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~-~~~~d~vld~~g~~~~~~ 249 (356)
|.|+|++|++++|++++.|++++++..+.++++.++ +.|++++++|+. .|+..++.++| |+|+|+++|.+|.+.+..
T Consensus 153 haAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ak-enG~~h~I~y~~-eD~v~~V~kiTngKGVd~vyDsvG~dt~~~ 230 (336)
T KOG1197|consen 153 HAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAK-ENGAEHPIDYST-EDYVDEVKKITNGKGVDAVYDSVGKDTFAK 230 (336)
T ss_pred EeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHH-hcCCcceeeccc-hhHHHHHHhccCCCCceeeeccccchhhHH
Confidence 999999999999999999999999999999999999 899999999999 89999999999 679999999999999999
Q ss_pred HHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccc---hHHHHHHHHHHHHHcCCeeeeeeE
Q 042784 250 VLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMD---RFADFTVEMESYIKEGKIRSKHVI 326 (356)
Q Consensus 250 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~g~i~~~~~~ 326 (356)
.+.+|++.|.+|.+|..++.. .+.++..+-.+++++...++..+.. .......+++.++.+|.+++.|++
T Consensus 231 sl~~Lk~~G~mVSfG~asgl~-------~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~ 303 (336)
T KOG1197|consen 231 SLAALKPMGKMVSFGNASGLI-------DPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDH 303 (336)
T ss_pred HHHHhccCceEEEeccccCCC-------CCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeee
Confidence 999999999999999987622 2233444445666654443333322 333456788899999999999999
Q ss_pred EeChhhHHHHHHHHHcCCCcceEEEEecC
Q 042784 327 YYGVESFLESLGSLFSSSNIGKVVIQVKA 355 (356)
Q Consensus 327 ~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (356)
+|||+++.+|+.++++++..||+++.+.+
T Consensus 304 ~ypls~vadA~~diesrktvGkvlLlp~~ 332 (336)
T KOG1197|consen 304 VYPLSKVADAHADIESRKTVGKVLLLPGP 332 (336)
T ss_pred ecchHHHHHHHHHHHhhhccceEEEeCCc
Confidence 99999999999999999999999998765
No 4
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.8e-47 Score=351.53 Aligned_cols=339 Identities=40% Similarity=0.718 Sum_probs=277.4
Q ss_pred eeeeeEEEecccCCCCCCCCCeEEEEe-eccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeee
Q 042784 11 VESKEWYISAYASDGVPTSDHLKLRSA-SVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAF 89 (356)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~ 89 (356)
.++|.|.++.. +++.+.+++|++++. +++.|. +++++||||||.++++||+|+..+.+.. ....+|+.+|..++++
T Consensus 7 ~~~~~~~~~~~-~~~~~~~~~f~~~~~~~~~~~~-~~~~gevlVkv~a~~inp~~~~~~~~~~-~~~~~p~~~G~~~~~~ 83 (348)
T PLN03154 7 VENKQVILKNY-IDGIPKETDMEVKLGNKIELKA-PKGSGAFLVKNLYLSCDPYMRGRMRDFH-DSYLPPFVPGQRIEGF 83 (348)
T ss_pred ccceEEEEecC-CCCCCCcccEEEEeecccCCCC-CCCCCeEEEEEEEEccCHHHHHhhhccC-CCCCCCcCCCCeeEee
Confidence 34688998876 577888899999995 243332 3579999999999999999887544311 2223456677667889
Q ss_pred EEEEEeccCCCCCCCCCEEEeccCCeeeEEeecCCc-ccccCCCCCCCCcc-ccccccCchhhhHHHHHHHhCCCCCCCE
Q 042784 90 GIARVIRSKDSKYSDGDIVLRAFLPVAEYSLLPCDL-LTRKLDPASGIPFP-DYLSSLGIPGFAAWVGIEVLGQPKSGSN 167 (356)
Q Consensus 90 G~v~~vg~~v~~~~~Gd~V~~~~g~~a~~~~v~~~~-~~~~i~~P~~~s~~-~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 167 (356)
|+|..+|+++++|++||+|+ ++|+|+||.+++.+. .+.+++.|++++++ + +|+++++++|||+++.+.+++++|++
T Consensus 84 G~v~~vg~~v~~~~~Gd~V~-~~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~-aa~l~~~~~TA~~al~~~~~~~~g~~ 161 (348)
T PLN03154 84 GVSKVVDSDDPNFKPGDLIS-GITGWEEYSLIRSSDNQLRKIQLQDDIPLSYH-LGLLGMAGFTAYAGFYEVCSPKKGDS 161 (348)
T ss_pred EEEEEEecCCCCCCCCCEEE-ecCCcEEEEEEeccccceEEccCcCCCCHHHH-HHHcccHHHHHHHHHHHhcCCCCCCE
Confidence 99999999999999999999 999999999999854 22334448999986 5 78999999999999987889999999
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchhhH
Q 042784 168 VFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKML 247 (356)
Q Consensus 168 VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~ 247 (356)
|||+|++|++|++++|+||.+|++|++++.++++.+.+++++|++.++++++..++.+.+++.+++++|++|||+|+..+
T Consensus 162 VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~ 241 (348)
T PLN03154 162 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDML 241 (348)
T ss_pred EEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHHHH
Confidence 99999999999999999999999999999899999998757999999998752467888888877789999999999999
Q ss_pred HHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeeeeeeEE
Q 042784 248 EAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRSKHVIY 327 (356)
Q Consensus 248 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~~~~~ 327 (356)
..++++++++|+++.+|...+... ..+....+...++.+++++.++....+.+...+.++++++++.+|++++.++.+
T Consensus 242 ~~~~~~l~~~G~iv~~G~~~~~~~--~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~ 319 (348)
T PLN03154 242 DAALLNMKIHGRIAVCGMVSLNSL--SASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMS 319 (348)
T ss_pred HHHHHHhccCCEEEEECccccCCC--CCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecc
Confidence 999999999999999997643210 000011234556788999998876555444557789999999999999988889
Q ss_pred eChhhHHHHHHHHHcCCCcceEEEEecCC
Q 042784 328 YGVESFLESLGSLFSSSNIGKVVIQVKAP 356 (356)
Q Consensus 328 ~~~~~~~~a~~~~~~~~~~gkvvi~~~~~ 356 (356)
|+|+++++||+.+.+++..||+|++++++
T Consensus 320 ~~L~~~~~A~~~l~~g~~~GKvVl~~~~~ 348 (348)
T PLN03154 320 EGLESAPAALVGLFSGKNVGKQVIRVAKE 348 (348)
T ss_pred cCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence 99999999999999999999999998764
No 5
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.5e-46 Score=344.92 Aligned_cols=334 Identities=48% Similarity=0.840 Sum_probs=274.5
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
.|.+.++++...+ +.++.|++++.+++.|.|+|+++||||||+++++||.|++...|.......+|+++|+..++.|++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~ 81 (338)
T cd08295 3 NKQVILKAYVTGF-PKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVA 81 (338)
T ss_pred ceEEEEecCCCCC-CCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEE
Confidence 5678888887544 447889999998877778999999999999999999999998874322134566777766778888
Q ss_pred EEeccCCCCCCCCCEEEeccCCeeeEEeecC-CcccccCCCCCCCCcc-ccccccCchhhhHHHHHHHhCCCCCCCEEEE
Q 042784 93 RVIRSKDSKYSDGDIVLRAFLPVAEYSLLPC-DLLTRKLDPASGIPFP-DYLSSLGIPGFAAWVGIEVLGQPKSGSNVFV 170 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~~g~~a~~~~v~~-~~~~~~i~~P~~~s~~-~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV 170 (356)
..+|+++++|++||+|+ ++|+|+||+++++ +.+++ +| |++++++ + +++++++++|||+++.+.+++++|++|||
T Consensus 82 ~~v~~~v~~~~vGd~V~-~~g~~aey~~v~~~~~~~~-lp-~~~~~~~~~-aa~l~~~~~tA~~~l~~~~~~~~g~~VlI 157 (338)
T cd08295 82 KVVDSGNPDFKVGDLVW-GFTGWEEYSLIPRGQDLRK-ID-HTDVPLSYY-LGLLGMPGLTAYAGFYEVCKPKKGETVFV 157 (338)
T ss_pred EEEecCCCCCCCCCEEE-ecCCceeEEEecchhceee-cC-CCCCCHHHH-HHhcccHHHHHHHHHHHhcCCCCCCEEEE
Confidence 88999999999999999 9999999999999 66644 32 4678876 6 78999999999999987889999999999
Q ss_pred EcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchhhHHHH
Q 042784 171 SAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAV 250 (356)
Q Consensus 171 ~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~ 250 (356)
+|++|++|++++|+||.+|++|+++++++++.+++++.+|+++++++.+..++.+.+++.+++++|++||++|+..+..+
T Consensus 158 ~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~ 237 (338)
T cd08295 158 SAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAV 237 (338)
T ss_pred ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHHH
Confidence 99999999999999999999999999999999999933999999997643478888888877789999999999999999
Q ss_pred HHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeeeeeeEEeCh
Q 042784 251 LNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRSKHVIYYGV 330 (356)
Q Consensus 251 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~~~~~~~~ 330 (356)
+++++++|+++.+|....... .......+...++.+++++.++..........+.++++++++.+|.+++.+...|++
T Consensus 238 ~~~l~~~G~iv~~G~~~~~~~--~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l 315 (338)
T cd08295 238 LLNMNLHGRIAACGMISQYNL--EWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGL 315 (338)
T ss_pred HHHhccCcEEEEecccccCCC--CCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCH
Confidence 999999999999986543110 000011223455667788887665544333456788899999999999887778999
Q ss_pred hhHHHHHHHHHcCCCcceEEEEe
Q 042784 331 ESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 331 ~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
+++++|++.+.+++..||+|+++
T Consensus 316 ~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 316 ESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHHHHhcCCCCceEEEEC
Confidence 99999999999999999999874
No 6
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.1e-47 Score=323.93 Aligned_cols=312 Identities=19% Similarity=0.190 Sum_probs=263.6
Q ss_pred eeeeeEEEecccCCCCCCCCCeEEEEeeccccCCCC-CCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeee
Q 042784 11 VESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSI-PDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAF 89 (356)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~ 89 (356)
..|++.++... .++++++.++ |++ .|+||+|++.++|||.+|.|.+.....+.+..+.|+..|+|.+
T Consensus 3 ~~~~A~vl~g~--------~di~i~~~p~----p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEss 70 (354)
T KOG0024|consen 3 ADNLALVLRGK--------GDIRIEQRPI----PTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESS 70 (354)
T ss_pred cccceeEEEcc--------CceeEeeCCC----CCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccc
Confidence 35778887744 7899997654 555 9999999999999999999999976677765556666667999
Q ss_pred EEEEEeccCCCCCCCCCEEEec------------------------------cCCeeeEEeecCCcccccCCCCCCCCcc
Q 042784 90 GIARVIRSKDSKYSDGDIVLRA------------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFP 139 (356)
Q Consensus 90 G~v~~vg~~v~~~~~Gd~V~~~------------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~ 139 (356)
|+|.++|++|++||+||||++- .|++++|++.+++.|++. ||++|++
T Consensus 71 GiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KL---Pd~vs~e 147 (354)
T KOG0024|consen 71 GIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKL---PDNVSFE 147 (354)
T ss_pred cchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeC---CCCCchh
Confidence 9999999999999999999961 289999999999999555 9999999
Q ss_pred ccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeecC
Q 042784 140 DYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYN 218 (356)
Q Consensus 140 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~ 218 (356)
+ .+|..+++++|||.+ ++++++|++|||+|| |++|+++...||++|+ +|++++..+.|+++++ +||++.+.+..
T Consensus 148 e--GAl~ePLsV~~HAcr-~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak-~~Ga~~~~~~~ 222 (354)
T KOG0024|consen 148 E--GALIEPLSVGVHACR-RAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAK-KFGATVTDPSS 222 (354)
T ss_pred h--cccccchhhhhhhhh-hcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHH-HhCCeEEeecc
Confidence 8 789999999999996 799999999999998 9999999999999999 9999999999999999 79998666544
Q ss_pred C---hhhHHHHHHHHCC-CCceEEEECCchh-hHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEE
Q 042784 219 S---EMSFDAALTKYFP-NGIDVYLDNVGGK-MLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKME 293 (356)
Q Consensus 219 ~---~~~~~~~i~~~~~-~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (356)
. .+.+.+.+.+..+ ..+|+.|||+|.. .++.++.+++.+|+++++|+... ....+......|++.+.
T Consensus 223 ~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~--------~~~fpi~~v~~kE~~~~ 294 (354)
T KOG0024|consen 223 HKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAE--------EIQFPIIDVALKEVDLR 294 (354)
T ss_pred ccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCC--------ccccChhhhhhheeeee
Confidence 3 2455666666655 3699999999986 89999999999999999998654 23456677788999999
Q ss_pred EEecccccchHHHHHHHHHHHHHcCCee--eeeeEEeChhhHHHHHHHHHcCCCcc-eEEEEecC
Q 042784 294 GFMIGSHMDRFADFTVEMESYIKEGKIR--SKHVIYYGVESFLESLGSLFSSSNIG-KVVIQVKA 355 (356)
Q Consensus 294 ~~~~~~~~~~~~~~l~~~~~~~~~g~i~--~~~~~~~~~~~~~~a~~~~~~~~~~g-kvvi~~~~ 355 (356)
|...+.. ..+..+++++++|++. +.+++.|+++++.+||+.+++++... |+++..++
T Consensus 295 g~fry~~-----~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 295 GSFRYCN-----GDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred eeeeecc-----ccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 8765432 3578899999999875 68999999999999999998887644 99887653
No 7
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.2e-46 Score=319.14 Aligned_cols=312 Identities=18% Similarity=0.188 Sum_probs=266.1
Q ss_pred eeeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeE
Q 042784 11 VESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFG 90 (356)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G 90 (356)
.+.++|..+... +...+++.++++ |+++++||+|||++||||++|+|...|.| +. ..+|+..|+|+.|
T Consensus 8 ~k~~g~~~~~~~-----G~l~p~~~~~~~----~~~g~~dv~vkI~~cGIChsDlH~~~gdw-g~--s~~PlV~GHEiaG 75 (360)
T KOG0023|consen 8 EKQFGWAARDPS-----GVLSPEVFSFPV----REPGENDVLVKIEYCGVCHSDLHAWKGDW-GL--SKYPLVPGHEIAG 75 (360)
T ss_pred hhhEEEEEECCC-----CCCCcceeEcCC----CCCCCCcEEEEEEEEeccchhHHHhhccC-Cc--ccCCccCCceeeE
Confidence 356788888653 444666677754 89999999999999999999999999855 33 4455555569999
Q ss_pred EEEEeccCCCCCCCCCEEEec-------------------------------------cCCeeeEEeecCCcccccCCCC
Q 042784 91 IARVIRSKDSKYSDGDIVLRA-------------------------------------FLPVAEYSLLPCDLLTRKLDPA 133 (356)
Q Consensus 91 ~v~~vg~~v~~~~~Gd~V~~~-------------------------------------~g~~a~~~~v~~~~~~~~i~~P 133 (356)
+|+++|++|++||+||||-++ .|+||+|+++++.+++++ |
T Consensus 76 ~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kI---P 152 (360)
T KOG0023|consen 76 VVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKI---P 152 (360)
T ss_pred EEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEEC---C
Confidence 999999999999999999862 166999999999998665 9
Q ss_pred CCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCc
Q 042784 134 SGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD 213 (356)
Q Consensus 134 ~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~ 213 (356)
++++++. ||.|.|++.|+|.+|. ..++.||+++.|.|+ |++|.+++|+||++|.+|+++++++++.+.+-+.||++.
T Consensus 153 ~~~pl~~-aAPlLCaGITvYspLk-~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~ 229 (360)
T KOG0023|consen 153 ENLPLAS-AAPLLCAGITVYSPLK-RSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADV 229 (360)
T ss_pred CCCChhh-ccchhhcceEEeehhH-HcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcce
Confidence 9999999 8999999999999997 577899999999998 679999999999999999999998855555544899999
Q ss_pred eeecCChhhHHHHHHHHCCCCceEEEECCchhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEE
Q 042784 214 AFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKME 293 (356)
Q Consensus 214 v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (356)
.++..+++++.+.+.+.+++++|-|... ..-.++.++.+++++|++|++|.+.. ....+..++..+.+.+.
T Consensus 230 fv~~~~d~d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~--------~~~~~~~~lil~~~~I~ 300 (360)
T KOG0023|consen 230 FVDSTEDPDIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK--------PLKLDTFPLILGRKSIK 300 (360)
T ss_pred eEEecCCHHHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC--------cccccchhhhcccEEEE
Confidence 9998855899999999887777777766 44588999999999999999999764 23456677788899999
Q ss_pred EEecccccchHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEEecC
Q 042784 294 GFMIGSHMDRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQVKA 355 (356)
Q Consensus 294 ~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (356)
|+.+++. ...++++++..++.+++.+. ..+++++++||+.|.+++.++|.|++++.
T Consensus 301 GS~vG~~-----ket~E~Ldf~a~~~ik~~IE-~v~~~~v~~a~erm~kgdV~yRfVvD~s~ 356 (360)
T KOG0023|consen 301 GSIVGSR-----KETQEALDFVARGLIKSPIE-LVKLSEVNEAYERMEKGDVRYRFVVDVSK 356 (360)
T ss_pred eeccccH-----HHHHHHHHHHHcCCCcCceE-EEehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence 9999875 45689999999999999986 89999999999999999999999999864
No 8
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3.8e-46 Score=321.43 Aligned_cols=310 Identities=17% Similarity=0.189 Sum_probs=264.9
Q ss_pred eeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 12 ESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
++++.+..+.. ++|+++++++ ++|+++|||||+.|+|+|++|.+.++|.. +.++|...|+|+.|+
T Consensus 2 k~~aAV~~~~~-------~Pl~i~ei~l----~~P~~gEVlVri~AtGVCHTD~~~~~G~~----p~~~P~vLGHEgAGi 66 (366)
T COG1062 2 KTRAAVAREAG-------KPLEIEEVDL----DPPRAGEVLVRITATGVCHTDAHTLSGDD----PEGFPAVLGHEGAGI 66 (366)
T ss_pred CceEeeeecCC-------CCeEEEEEec----CCCCCCeEEEEEEEeeccccchhhhcCCC----CCCCceecccccccE
Confidence 35666666543 8999999999 88999999999999999999999998643 444666666799999
Q ss_pred EEEeccCCCCCCCCCEEEec------------------------------------------------c--CCeeeEEee
Q 042784 92 ARVIRSKDSKYSDGDIVLRA------------------------------------------------F--LPVAEYSLL 121 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~------------------------------------------------~--g~~a~~~~v 121 (356)
|++||++|..+|+||.|+.. + ++|+||.++
T Consensus 67 Ve~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv 146 (366)
T COG1062 67 VEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVV 146 (366)
T ss_pred EEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheee
Confidence 99999999999999999941 1 489999999
Q ss_pred cCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChH
Q 042784 122 PCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDD 200 (356)
Q Consensus 122 ~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~ 200 (356)
++.++++ + ++..+++. ++.+.|...|.+.++.+.+++++|++|.|.|- |++|++++|-|+..|+ +|++++..++
T Consensus 147 ~~~s~vk-i--~~~~p~~~-a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD~~~~ 221 (366)
T COG1062 147 HEISLVK-I--DPDAPLEK-ACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVDINPE 221 (366)
T ss_pred cccceEE-C--CCCCCccc-eEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEeCCHH
Confidence 9988855 4 67789988 89999999999999999999999999999996 9999999999999999 9999999999
Q ss_pred HHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccch
Q 042784 201 NVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGV 279 (356)
Q Consensus 201 ~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 279 (356)
|+++++ +||+.+++|.++..++.+.+.++|++|+|++|||+|+ ..+++++.++.++|+.+.+|...... ...
T Consensus 222 Kl~~A~-~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~------~i~ 294 (366)
T COG1062 222 KLELAK-KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQ------EIS 294 (366)
T ss_pred HHHHHH-hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCc------eee
Confidence 999999 9999999999873479999999998899999999998 58999999999999999999876522 122
Q ss_pred hhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCee--eeeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 280 RNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIR--SKHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
.+...+... .+++|+..+.... +.++..+++++.+|+|. ..+++.++|+|+++||++|.+++.. |-||+
T Consensus 295 ~~~~~lv~g-r~~~Gs~~G~~~p--~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 295 TRPFQLVTG-RVWKGSAFGGARP--RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred cChHHeecc-ceEEEEeecCCcc--ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 344444444 7888887776543 25678899999999876 4788899999999999999998875 55554
No 9
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=2.8e-45 Score=310.16 Aligned_cols=330 Identities=39% Similarity=0.697 Sum_probs=286.8
Q ss_pred eeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEE
Q 042784 14 KEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIAR 93 (356)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~ 93 (356)
+.|++. ..+.+.+.+++|++++.++ |+|+++|||||+.+.+++|+.+..++- ...+.+|+.+|-...+-++..
T Consensus 10 ~~~~la-~rP~g~p~~d~F~lee~~v----p~p~~GqvLl~~~ylS~DPymRgrm~d--~~SY~~P~~lG~~~~gg~V~~ 82 (340)
T COG2130 10 RRIVLA-SRPEGAPVPDDFRLEEVDV----PEPGEGQVLLRTLYLSLDPYMRGRMSD--APSYAPPVELGEVMVGGTVAK 82 (340)
T ss_pred heeeec-cCCCCCCCCCCceeEeccC----CCCCcCceEEEEEEeccCHHHeecccC--CcccCCCcCCCceeECCeeEE
Confidence 445544 4688888999999999988 788999999999999999988877763 236788999998777666667
Q ss_pred EeccCCCCCCCCCEEEeccCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcC
Q 042784 94 VIRSKDSKYSDGDIVLRAFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAA 173 (356)
Q Consensus 94 ~vg~~v~~~~~Gd~V~~~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~ 173 (356)
++.|+.+.|++||.|. +..+|+||.+++.+.+ ++++ |....+...+..|..++.|||.+|.++++.++|++|+|.+|
T Consensus 83 Vv~S~~~~f~~GD~V~-~~~GWq~y~i~~~~~l-~Kvd-~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaA 159 (340)
T COG2130 83 VVASNHPGFQPGDIVV-GVSGWQEYAISDGEGL-RKLD-PSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAA 159 (340)
T ss_pred EEecCCCCCCCCCEEE-ecccceEEEeechhhc-eecC-CCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEec
Confidence 7788999999999999 9999999999999876 6666 44333333357899999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchhhHHHHHHh
Q 042784 174 AGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNH 253 (356)
Q Consensus 174 ~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~ 253 (356)
+|.+|..+.|+||..|++|+.++.+++|..++++.+|.+.++||++ .++.+.+.+..++|+|+.||++|++.+...+..
T Consensus 160 aGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~-~d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ 238 (340)
T COG2130 160 AGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKA-EDFAQALKEACPKGIDVYFENVGGEVLDAVLPL 238 (340)
T ss_pred ccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCc-ccHHHHHHHHCCCCeEEEEEcCCchHHHHHHHh
Confidence 9999999999999999999999999999999997799999999999 799999999999999999999999999999999
Q ss_pred cccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccccc-chHHHHHHHHHHHHHcCCeeeeeeEEeChhh
Q 042784 254 VNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM-DRFADFTVEMESYIKEGKIRSKHVIYYGVES 332 (356)
Q Consensus 254 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~ 332 (356)
|+..+++..||..+..+.. ..+..+..+..++.+.+++.|+-+.+.+ .+.++.++++-+|+.+|+|+...+.+-.||+
T Consensus 239 ln~~aRi~~CG~IS~YN~~-~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEn 317 (340)
T COG2130 239 LNLFARIPVCGAISQYNAP-ELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLEN 317 (340)
T ss_pred hccccceeeeeehhhcCCC-CCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhhhhc
Confidence 9999999999987764422 2233445666778889999999885544 4455999999999999999999988888999
Q ss_pred HHHHHHHHHcCCCcceEEEEecC
Q 042784 333 FLESLGSLFSSSNIGKVVIQVKA 355 (356)
Q Consensus 333 ~~~a~~~~~~~~~~gkvvi~~~~ 355 (356)
+++||.-+.+++.+||+|+++.+
T Consensus 318 aP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 318 APEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred cHHHHHHHhcCCccceEEEEecC
Confidence 99999999999999999999864
No 10
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.2e-44 Score=336.07 Aligned_cols=316 Identities=16% Similarity=0.161 Sum_probs=264.1
Q ss_pred eeeEEEeccc-CCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 13 SKEWYISAYA-SDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 13 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
|||+++++++ +.+++.++.++++++++ |+|+++||+|||.+++||++|++.+.|... ...|..+ |+|++|+
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~----P~~~~~evlV~v~~~gi~~~D~~~~~g~~~--~~~p~i~--GhE~~G~ 72 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVEL----DPPGPGEVLVKIAAAGLCHSDLSVINGDRP--RPLPMAL--GHEAAGV 72 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeec----CCCCCCeEEEEEEEEeeCccchHhhcCCCC--CCCCccC--CccceeE
Confidence 6889999876 23344578899999866 778999999999999999999999887432 1233444 4599999
Q ss_pred EEEeccCCCCCCCCCEEEec--------------------------------------------------cCCeeeEEee
Q 042784 92 ARVIRSKDSKYSDGDIVLRA--------------------------------------------------FLPVAEYSLL 121 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~--------------------------------------------------~g~~a~~~~v 121 (356)
|+++|++++++++||||++. .|+|+||+.+
T Consensus 73 V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v 152 (371)
T cd08281 73 VVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVV 152 (371)
T ss_pred EEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEe
Confidence 99999999999999999831 1689999999
Q ss_pred cCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChH
Q 042784 122 PCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDD 200 (356)
Q Consensus 122 ~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~ 200 (356)
+++.++++ |+++++++ |+.+.+++.|||+++...+++++|++|||+|+ |++|++++|+||..|+ +|++++.+++
T Consensus 153 ~~~~~~~l---P~~l~~~~-aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~ 227 (371)
T cd08281 153 SRRSVVKI---DKDVPLEI-AALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNED 227 (371)
T ss_pred cccceEEC---CCCCChHH-hhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHH
Confidence 99888555 99999998 78888999999999877788999999999985 9999999999999999 7999999999
Q ss_pred HHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccch
Q 042784 201 NVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGV 279 (356)
Q Consensus 201 ~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 279 (356)
++++++ ++|+++++++.+ .++.+.+++++++++|++|||+|. ..+..++++++++|+++.+|...... ...
T Consensus 228 r~~~a~-~~Ga~~~i~~~~-~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~------~~~ 299 (371)
T cd08281 228 KLALAR-ELGATATVNAGD-PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEA------RLS 299 (371)
T ss_pred HHHHHH-HcCCceEeCCCc-hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCc------eee
Confidence 999998 999999999876 678888888876689999999986 58899999999999999998754311 112
Q ss_pred hhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 280 RNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
.+...++.+++++.++...++. ..+.++++++++.+|++++ .++++|+|+|+++||+.+.+++..+|+|+
T Consensus 300 ~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 300 VPALSLVAEERTLKGSYMGSCV--PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred ecHHHHhhcCCEEEEEecCCCC--hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 3445678899999998766542 1346788899999999975 57889999999999999999998888764
No 11
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=1.1e-42 Score=320.51 Aligned_cols=332 Identities=33% Similarity=0.615 Sum_probs=254.5
Q ss_pred eeeEEEecccC-CCCCCCCCeEEEEeeccccCCCC-CCCcEEEEEEEEEeChhhhhhhcCCCCC-CccCCCccCceeeee
Q 042784 13 SKEWYISAYAS-DGVPTSDHLKLRSASVSLAIDSI-PDHHVAVETLWISIDPYLRATMTGTNDG-LYFPQFNLNQVILAF 89 (356)
Q Consensus 13 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~~~~~~ 89 (356)
.|.++++...+ .+.+.++.+++++.+. |+| +++||||||.++|||+.|+...... .+ .+..+++...|+|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~evlV~v~a~gin~~d~~~~~~~-~~~~~~~~~~~~~G~e~~ 77 (345)
T cd08293 3 NKRVVLNSRPGKNGNPVAENFRVEECTL----PDELNEGQVLVRTLYLSVDPYMRCRMNED-TGTDYLAPWQLSQVLDGG 77 (345)
T ss_pred ceEEEEecccCCCCCCCccceEEEeccC----CCCCCCCeEEEEEEEEecCHHHHhhcccc-cccccCCCccCCCceEee
Confidence 45566665532 6777889999998866 666 4999999999999999986433211 11 112234455566999
Q ss_pred EEEEEeccCCCCCCCCCEEEeccCCeeeEEeecCCcccccCCCCCCCCccc---cccccCchhhhHHHHHHHhCCCCCC-
Q 042784 90 GIARVIRSKDSKYSDGDIVLRAFLPVAEYSLLPCDLLTRKLDPASGIPFPD---YLSSLGIPGFAAWVGIEVLGQPKSG- 165 (356)
Q Consensus 90 G~v~~vg~~v~~~~~Gd~V~~~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~---~aa~l~~~~~ta~~~l~~~~~~~~g- 165 (356)
|+|+++|+++++|++||+|+...++|+||++++++.++++ |++++..+ .+++++.+++|||+++.+.+++++|
T Consensus 78 G~V~~vG~~v~~~~~Gd~V~~~~~~~ae~~~v~~~~~~~i---P~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~ 154 (345)
T cd08293 78 GVGVVEESKHQKFAVGDIVTSFNWPWQTYAVLDGSSLEKV---DPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGA 154 (345)
T ss_pred EEEEEeccCCCCCCCCCEEEecCCCceeEEEecHHHeEEc---CccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCC
Confidence 9999999999999999999933368999999999888555 87754332 0357788999999999878888877
Q ss_pred -CEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 166 -SNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 166 -~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
++|||+|++|++|++++|+||.+|+ +|+++++++++.+.+++++|+++++++++ .++.+.+++++++++|++|||+|
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~-~~~~~~i~~~~~~gvd~vid~~g 233 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT-DNVAERLRELCPEGVDVYFDNVG 233 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC-CCHHHHHHHHCCCCceEEEECCC
Confidence 9999999999999999999999999 89999999999999984599999999886 67888888888778999999999
Q ss_pred hhhHHHHHHhcccCCEEEEEecccccccccccccch-hhhhh-hhccceEEEEEecccccchHHHHHHHHHHHHHcCCee
Q 042784 244 GKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGV-RNLLN-MIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIR 321 (356)
Q Consensus 244 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~ 321 (356)
+..+..++++++++|+++.+|............... ..... ...+++++..+..........+.++++++++.+|.++
T Consensus 234 ~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~ 313 (345)
T cd08293 234 GEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLK 313 (345)
T ss_pred cHHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCcc
Confidence 988899999999999999998643211000000000 00111 1234555554443333333456788899999999998
Q ss_pred eeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 322 SKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 322 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
+.+...++++++++|++.+.+++..||+|+++
T Consensus 314 ~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 314 VKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred ceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 87666789999999999999999899999874
No 12
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=4.2e-43 Score=324.37 Aligned_cols=310 Identities=17% Similarity=0.169 Sum_probs=256.3
Q ss_pred eeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 12 ESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
+||++++.+++ +.++++++++ |+|+++||+|||.++++|++|++...|... ..+|...|+|++|+
T Consensus 1 ~mka~~~~~~~-------~~~~~~~~~~----p~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~G~e~~G~ 65 (358)
T TIGR03451 1 TVRGVIARSKG-------APVELETIVV----PDPGPGEVIVDIQACGVCHTDLHYREGGIN----DEFPFLLGHEAAGV 65 (358)
T ss_pred CcEEEEEccCC-------CCCEEEEEEC----CCCCCCeEEEEEEEEeecHHHHHHhcCCcc----ccCCcccccceEEE
Confidence 48899998764 4478888866 778999999999999999999999886432 22333444599999
Q ss_pred EEEeccCCCCCCCCCEEEe------------------------------------------ccCCeeeEEeecCCccccc
Q 042784 92 ARVIRSKDSKYSDGDIVLR------------------------------------------AFLPVAEYSLLPCDLLTRK 129 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~------------------------------------------~~g~~a~~~~v~~~~~~~~ 129 (356)
|+++|+++++|++||||++ ..|+|+||+.++++.++.+
T Consensus 66 V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i 145 (358)
T TIGR03451 66 VEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKV 145 (358)
T ss_pred EEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEEC
Confidence 9999999999999999983 1388999999999887554
Q ss_pred CCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHH
Q 042784 130 LDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEE 208 (356)
Q Consensus 130 i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~ 208 (356)
|+++++++ ++.+++.+.+||+++...+++++|++|||+|+ |++|++++|+||..|+ +|++++++++++++++ +
T Consensus 146 ---p~~~~~~~-aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~ 219 (358)
T TIGR03451 146 ---DPAADPAA-AGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-E 219 (358)
T ss_pred ---CCCCChhH-hhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H
Confidence 89999988 78899999999999877788999999999985 9999999999999999 5999999999999998 8
Q ss_pred hCCCceeecCChhhHHHHHHHHCC-CCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhh
Q 042784 209 FGYDDAFNYNSEMSFDAALTKYFP-NGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMI 286 (356)
Q Consensus 209 ~g~~~v~~~~~~~~~~~~i~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 286 (356)
+|+++++++.+ .++.+.+.+.++ .++|++|||+|+ ..+..++++++++|+++.+|...... ....+...++
T Consensus 220 ~Ga~~~i~~~~-~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~------~~~~~~~~~~ 292 (358)
T TIGR03451 220 FGATHTVNSSG-TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDM------TLELPLLDVF 292 (358)
T ss_pred cCCceEEcCCC-cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCc------eeeccHHHHh
Confidence 99999999876 678888888875 489999999997 58899999999999999999754311 1123445667
Q ss_pred ccceEEEEEecccccchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 287 GKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
.+++++.++...... ..+.++++++++.+|.+++ .++++|+++|+++||+.+.+++.. |+++.
T Consensus 293 ~~~~~i~~~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 293 GRGGALKSSWYGDCL--PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred hcCCEEEEeecCCCC--cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 788888887543221 2356888999999999965 578899999999999999888765 77764
No 13
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=4.6e-43 Score=323.71 Aligned_cols=315 Identities=17% Similarity=0.186 Sum_probs=248.9
Q ss_pred CCccccccceeeeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCC
Q 042784 1 MGSAEEKLETVESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQF 80 (356)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~ 80 (356)
|+.+.|...++++.+|.... ..+.+++.+++. |+|+++||+|||.+++||++|++.+.|.+. ....|.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~~~~~----p~~~~~eVlV~v~~~gic~sD~~~~~g~~~-~~~~p~ 68 (360)
T PLN02586 1 MAKSPEEEHPQKAFGWAARD-------PSGVLSPFHFSR----RENGDEDVTVKILYCGVCHSDLHTIKNEWG-FTRYPI 68 (360)
T ss_pred CCCChhhhchhheeEEEecC-------CCCCceEEeecC----CCCCCCeEEEEEEEecCChhhHhhhcCCcC-CCCCCc
Confidence 66666666554455555432 336677777644 788999999999999999999999886432 112344
Q ss_pred ccCceeeeeEEEEEeccCCCCCCCCCEEEec-------------------------------------cCCeeeEEeecC
Q 042784 81 NLNQVILAFGIARVIRSKDSKYSDGDIVLRA-------------------------------------FLPVAEYSLLPC 123 (356)
Q Consensus 81 ~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------------~g~~a~~~~v~~ 123 (356)
.+| +|++|+|+++|+++++|++||||++. .|+|+||+++++
T Consensus 69 i~G--hE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~ 146 (360)
T PLN02586 69 VPG--HEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQ 146 (360)
T ss_pred cCC--cceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEch
Confidence 455 59999999999999999999999731 388999999999
Q ss_pred CcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 042784 124 DLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVK 203 (356)
Q Consensus 124 ~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~ 203 (356)
+.++++ |+++++++ +|++++++.|||+++.....+++|++|+|.|+ |++|++++|+||.+|++|++++.++++..
T Consensus 147 ~~~~~l---P~~ls~~~-aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~ 221 (360)
T PLN02586 147 HFVLRF---PDNLPLDA-GAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKED 221 (360)
T ss_pred HHeeeC---CCCCCHHH-hhhhhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhh
Confidence 888555 99999999 78999999999999976677789999999886 99999999999999999988877766654
Q ss_pred HHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchh-hHHHHHHhcccCCEEEEEecccccccccccccchhhh
Q 042784 204 LLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGK-MLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNL 282 (356)
Q Consensus 204 ~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 282 (356)
.+.+++|++.++++.+ . +.+++.++ ++|+|||++|.. .+..++++++++|+++.+|..... ...+.
T Consensus 222 ~~~~~~Ga~~vi~~~~-~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~--------~~~~~ 288 (360)
T PLN02586 222 EAINRLGADSFLVSTD-P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKP--------LELPI 288 (360)
T ss_pred hHHHhCCCcEEEcCCC-H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCC--------CccCH
Confidence 4433899998888764 2 24555544 699999999974 788999999999999999865321 12234
Q ss_pred hhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 283 LNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
..++.++..+.++..++. +.++++++++.+|++++.+ ++|+|+|+++||+.+.+++..||+|+++
T Consensus 289 ~~~~~~~~~i~g~~~~~~-----~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 289 FPLVLGRKLVGGSDIGGI-----KETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred HHHHhCCeEEEEcCcCCH-----HHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 455667777777654432 4578899999999999877 4899999999999999999889999986
No 14
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=8.3e-43 Score=320.42 Aligned_cols=304 Identities=19% Similarity=0.159 Sum_probs=250.0
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||++++.. ++.++++++++ |+++++||+|||.++++|++|++.+.|........|..+| +|++|+|
T Consensus 1 mka~~~~~--------~~~l~~~~~~~----p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G--~e~~G~V 66 (339)
T cd08239 1 MRGAVFPG--------DRTVELREFPV----PVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPG--HEPAGVV 66 (339)
T ss_pred CeEEEEec--------CCceEEEecCC----CCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceec--cCceEEE
Confidence 56777662 36788988755 7789999999999999999999988754322111234444 5999999
Q ss_pred EEeccCCCCCCCCCEEEec------------------------------cCCeeeEEeecCCcccccCCCCCCCCccccc
Q 042784 93 RVIRSKDSKYSDGDIVLRA------------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYL 142 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~------------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~a 142 (356)
+++|++++.+++||+|+.. .|+|+||+.++.+.++.+ |+++++++ +
T Consensus 67 ~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~---P~~~~~~~-a 142 (339)
T cd08239 67 VAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPL---PDDLSFAD-G 142 (339)
T ss_pred EEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEEC---CCCCCHHH-h
Confidence 9999999999999999831 388999999999888555 99999999 7
Q ss_pred cccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHhCCCceeecCChh
Q 042784 143 SSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCK-VVGSTGSDDNVKLLKEEFGYDDAFNYNSEM 221 (356)
Q Consensus 143 a~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~-V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 221 (356)
+++++++.|||+++. ..++++|++|||+|+ |++|++++|+||.+|++ |+++++++++.++++ ++|++.++++++ .
T Consensus 143 a~l~~~~~ta~~~l~-~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~-~~ga~~~i~~~~-~ 218 (339)
T cd08239 143 ALLLCGIGTAYHALR-RVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK-ALGADFVINSGQ-D 218 (339)
T ss_pred hhhcchHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEcCCc-c
Confidence 889999999999996 577899999999986 99999999999999997 999999999999998 899999999876 4
Q ss_pred hHHHHHHHHCC-CCceEEEECCchh-hHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccc
Q 042784 222 SFDAALTKYFP-NGIDVYLDNVGGK-MLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGS 299 (356)
Q Consensus 222 ~~~~~i~~~~~-~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (356)
+ .+.+.++++ .++|++|||+|+. .+..++++++++|+++.+|..... .......++.+++++.++...+
T Consensus 219 ~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--------~~~~~~~~~~~~~~i~g~~~~~ 289 (339)
T cd08239 219 D-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL--------TIEVSNDLIRKQRTLIGSWYFS 289 (339)
T ss_pred h-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc--------ccCcHHHHHhCCCEEEEEecCC
Confidence 4 667777764 4899999999986 558899999999999999875431 1112235677889998876543
Q ss_pred ccchHHHHHHHHHHHHHcCCee--eeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 300 HMDRFADFTVEMESYIKEGKIR--SKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 300 ~~~~~~~~l~~~~~~~~~g~i~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
.+.++++++++.+|.+. +.++++|+++++++||+.+.+++ .||+|+++
T Consensus 290 -----~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 290 -----VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred -----HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 24678899999999886 47888999999999999998875 69999975
No 15
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.8e-42 Score=316.35 Aligned_cols=322 Identities=31% Similarity=0.519 Sum_probs=255.0
Q ss_pred eeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEE
Q 042784 14 KEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIAR 93 (356)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~ 93 (356)
|.|+++.. +.+.++++.+++.+.+. |.|+++||||||.++++|+.++.-.. .....+. ..|.+++|+|.
T Consensus 2 ~~~~~~~~-~~~~~~~~~l~~~~~~~----p~~~~~evlv~v~a~~~n~~~~~g~~----~~~~~~~--i~G~~~~g~v~ 70 (325)
T TIGR02825 2 KTWTLKKH-FVGYPTDSDFELKTVEL----PPLNNGEVLLEALFLSVDPYMRVAAK----RLKEGDT--MMGQQVARVVE 70 (325)
T ss_pred cEEEEecC-CCCCCCCCceEEEeccC----CCCCCCcEEEEEEEEecCHHHhcccC----cCCCCCc--EecceEEEEEE
Confidence 56777765 46778889999998755 78999999999999999997654322 1111233 44558999999
Q ss_pred EeccCCCCCCCCCEEEeccCCeeeEEeecCCccccc-CCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEc
Q 042784 94 VIRSKDSKYSDGDIVLRAFLPVAEYSLLPCDLLTRK-LDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSA 172 (356)
Q Consensus 94 ~vg~~v~~~~~Gd~V~~~~g~~a~~~~v~~~~~~~~-i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g 172 (356)
.+|+ .|++||||+ ++++|++|++++.+.+... .+.|+++++++++++++++++|||+++.+.+++++|++|||+|
T Consensus 71 ~~~~---~~~~GdrV~-~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~g 146 (325)
T TIGR02825 71 SKNV---ALPKGTIVL-ASPGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNA 146 (325)
T ss_pred eCCC---CCCCCCEEE-EecCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeC
Confidence 9774 599999999 8889999999998776433 1238899998822689999999999998889999999999999
Q ss_pred CCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchhhHHHHHH
Q 042784 173 AAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLN 252 (356)
Q Consensus 173 ~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~ 252 (356)
++|++|++++|+||..|++|+++++++++.+.++ ++|++.++++++...+.+.++..+++++|++|||+|+..+..+++
T Consensus 147 a~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~ 225 (325)
T TIGR02825 147 AAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIG 225 (325)
T ss_pred CccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHH
Confidence 9999999999999999999999999999999998 899999999876335666777777678999999999998899999
Q ss_pred hcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccccc-chHHHHHHHHHHHHHcCCeeeeeeEEeChh
Q 042784 253 HVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM-DRFADFTVEMESYIKEGKIRSKHVIYYGVE 331 (356)
Q Consensus 253 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~ 331 (356)
+++++|+++.+|...........+ .......++.+++++.++....+. ....+.++++++++++|++++.+..+|+++
T Consensus 226 ~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~ 304 (325)
T TIGR02825 226 QMKKFGRIAICGAISTYNRTGPLP-PGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFE 304 (325)
T ss_pred HhCcCcEEEEecchhhcccCCCCC-CCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccHH
Confidence 999999999998754311000001 011233445677777776554332 223457889999999999998877789999
Q ss_pred hHHHHHHHHHcCCCcceEEEE
Q 042784 332 SFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 332 ~~~~a~~~~~~~~~~gkvvi~ 352 (356)
++++|++.+.+++..||+|++
T Consensus 305 ~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 305 NMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHHHHHhcCCCCCeEEeC
Confidence 999999999999999999973
No 16
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=2.1e-42 Score=316.47 Aligned_cols=320 Identities=34% Similarity=0.610 Sum_probs=256.3
Q ss_pred eeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 12 ESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
+|++|++.... .+.+.++.+++++.+. |+|+++||+|||.+++||+.|+.... .. .+++...|.+++|+
T Consensus 2 ~~~~~~~~~~~-~~~~~~~~l~~~~~~~----p~~~~~evlVkv~a~~in~~~~~~~~----~~--~~~p~v~G~e~~G~ 70 (329)
T cd08294 2 KAKTWVLKKHF-DGKPKESDFELVEEEL----PPLKDGEVLCEALFLSVDPYMRPYSK----RL--NEGDTMIGTQVAKV 70 (329)
T ss_pred CceEEEEecCC-CCCCCccceEEEecCC----CCCCCCcEEEEEEEEecCHHHhcccc----cC--CCCCcEecceEEEE
Confidence 58899999731 1234458899998866 78999999999999999998765221 11 12333444588899
Q ss_pred EEEeccCCCCCCCCCEEEeccCCeeeEEeecCC---cccccCCCCCCCC--c---cccccccCchhhhHHHHHHHhCCCC
Q 042784 92 ARVIRSKDSKYSDGDIVLRAFLPVAEYSLLPCD---LLTRKLDPASGIP--F---PDYLSSLGIPGFAAWVGIEVLGQPK 163 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~~g~~a~~~~v~~~---~~~~~i~~P~~~s--~---~~~aa~l~~~~~ta~~~l~~~~~~~ 163 (356)
|++ .++++++||||+ ++++|++|+.++.+ .++.+ |++++ + .. +++++++++|||+++.+.++++
T Consensus 71 V~~---~~~~~~~Gd~V~-~~~~~~~~~~~~~~~~~~~~~i---P~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~ 142 (329)
T cd08294 71 IES---KNSKFPVGTIVV-ASFGWRTHTVSDGKDQPDLYKL---PADLPDDLPPSLA-LGVLGMPGLTAYFGLLEICKPK 142 (329)
T ss_pred Eec---CCCCCCCCCEEE-eeCCeeeEEEECCccccceEEC---CccccccCChHHH-HHhcccHHHHHHHHHHHhcCCC
Confidence 984 456899999999 88899999999998 77554 99988 2 22 3578899999999998889999
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
+|++|||+|++|++|.+++|+|+..|++|+++++++++.++++ ++|+++++++++ .++.+.+++++++++|++||++|
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-~~Ga~~vi~~~~-~~~~~~v~~~~~~gvd~vld~~g 220 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKT-VSLEEALKEAAPDGIDCYFDNVG 220 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCC-ccHHHHHHHHCCCCcEEEEECCC
Confidence 9999999999999999999999999999999999999999999 799999999987 67888888887778999999999
Q ss_pred hhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeeee
Q 042784 244 GKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRSK 323 (356)
Q Consensus 244 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~ 323 (356)
++.+..++++++++|+++.+|............ .......++.+++++.++....+.....+.++++++++.+|.+++.
T Consensus 221 ~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~ 299 (329)
T cd08294 221 GEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKK-GPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR 299 (329)
T ss_pred HHHHHHHHHhhccCCEEEEEcchhccCCCCCCc-CcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC
Confidence 999999999999999999998643211000000 0112334566788888876554433445678899999999999987
Q ss_pred eeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 324 HVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 324 ~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
+..+|+++++++|++.+.+++..||+|+++
T Consensus 300 ~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 300 EHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 667899999999999999999999999874
No 17
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.7e-42 Score=322.55 Aligned_cols=314 Identities=16% Similarity=0.165 Sum_probs=253.8
Q ss_pred eeeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeE
Q 042784 11 VESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFG 90 (356)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G 90 (356)
.+||++++.+.. +.+.+++++. |+|+++||+|||.++++|++|++.+.|..... .++|...|+|++|
T Consensus 9 ~~mka~~~~~~~-------~~~~~~e~~~----P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~--~~~p~i~GhE~~G 75 (381)
T PLN02740 9 ITCKAAVAWGPG-------EPLVMEEIRV----DPPQKMEVRIKILYTSICHTDLSAWKGENEAQ--RAYPRILGHEAAG 75 (381)
T ss_pred eeeEEEEEecCC-------CCcEEEEeeC----CCCCCCeEEEEEEEEecChhhHHHhCCCCccc--CCCCccccccceE
Confidence 468888887542 4578888765 77899999999999999999999988754222 2233444459999
Q ss_pred EEEEeccCCCCCCCCCEEEec-----------------------------------------------------cCCeee
Q 042784 91 IARVIRSKDSKYSDGDIVLRA-----------------------------------------------------FLPVAE 117 (356)
Q Consensus 91 ~v~~vg~~v~~~~~Gd~V~~~-----------------------------------------------------~g~~a~ 117 (356)
+|+++|++++++++||||++. .|+|+|
T Consensus 76 ~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~ae 155 (381)
T PLN02740 76 IVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTE 155 (381)
T ss_pred EEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCcccee
Confidence 999999999999999999831 378999
Q ss_pred EEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEe
Q 042784 118 YSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGST 196 (356)
Q Consensus 118 ~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~ 196 (356)
|++++.+.++++ |+++++++ +|.+++++.|||+++...+++++|++|||+|+ |++|++++|+||.+|+ +|++++
T Consensus 156 y~~v~~~~~~~i---P~~~~~~~-aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~ 230 (381)
T PLN02740 156 YTVLDSACVVKI---DPNAPLKK-MSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVD 230 (381)
T ss_pred EEEEehHHeEEC---CCCCCHHH-hhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEc
Confidence 999999887554 99999998 78899999999999877789999999999996 9999999999999999 799999
Q ss_pred CChHHHHHHHHHhCCCceeecCCh-hhHHHHHHHHCCCCceEEEECCch-hhHHHHHHhcccC-CEEEEEeccccccccc
Q 042784 197 GSDDNVKLLKEEFGYDDAFNYNSE-MSFDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVH-ARIILCGMISQYNKVW 273 (356)
Q Consensus 197 ~s~~~~~~~~~~~g~~~v~~~~~~-~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 273 (356)
+++++.+.++ ++|++.++++.+. .++.+.+++++++++|++||++|. ..+..++++++++ |+++.+|......
T Consensus 231 ~~~~r~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~--- 306 (381)
T PLN02740 231 INPEKFEKGK-EMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPK--- 306 (381)
T ss_pred CChHHHHHHH-HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCc---
Confidence 9999999998 8999989987752 247788888876589999999997 5889999999996 9999999764311
Q ss_pred ccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 274 TERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
........+ .+++++.++..+++.. ...+.++++++.++.+++ .++++|+|+|+++|++.+.+++. .|++|
T Consensus 307 ---~~~~~~~~~-~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~ 379 (381)
T PLN02740 307 ---MLPLHPMEL-FDGRSITGSVFGDFKG--KSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLL 379 (381)
T ss_pred ---eecccHHHH-hcCCeEEEEecCCCCc--HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEE
Confidence 011122222 3678888876655432 245788999999998864 68889999999999999988765 59998
Q ss_pred Ee
Q 042784 352 QV 353 (356)
Q Consensus 352 ~~ 353 (356)
++
T Consensus 380 ~~ 381 (381)
T PLN02740 380 HL 381 (381)
T ss_pred eC
Confidence 64
No 18
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=3e-42 Score=320.21 Aligned_cols=311 Identities=15% Similarity=0.150 Sum_probs=255.8
Q ss_pred eeeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeE
Q 042784 11 VESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFG 90 (356)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G 90 (356)
..||++++... .+.+++++.++ |.|+++||+|||.++++|++|++.+.|.. ..|..+| +|++|
T Consensus 11 ~~mka~~~~~~-------~~~~~~~e~~~----P~~~~~eVlVkv~~~gic~sD~~~~~g~~----~~p~i~G--hE~~G 73 (378)
T PLN02827 11 ITCRAAVAWGA-------GEALVMEEVEV----SPPQPLEIRIKVVSTSLCRSDLSAWESQA----LFPRIFG--HEASG 73 (378)
T ss_pred ceeEEEEEecC-------CCCceEEEeec----CCCCCCEEEEEEEEEecChhHHHHhcCCC----CCCeeec--ccceE
Confidence 34778877643 25688888866 77999999999999999999999887531 2344455 59999
Q ss_pred EEEEeccCCCCCCCCCEEEec--------------------------------------------------cCCeeeEEe
Q 042784 91 IARVIRSKDSKYSDGDIVLRA--------------------------------------------------FLPVAEYSL 120 (356)
Q Consensus 91 ~v~~vg~~v~~~~~Gd~V~~~--------------------------------------------------~g~~a~~~~ 120 (356)
+|+++|++++++++||||+.. .|+|+||+.
T Consensus 74 ~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~ 153 (378)
T PLN02827 74 IVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTV 153 (378)
T ss_pred EEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEE
Confidence 999999999999999999931 178999999
Q ss_pred ecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCh
Q 042784 121 LPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSD 199 (356)
Q Consensus 121 v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~ 199 (356)
++++.++++ |+++++++ ++.+.+++.++|+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ .|++++.++
T Consensus 154 v~~~~~~~i---P~~l~~~~-aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~ 228 (378)
T PLN02827 154 VHSGCAVKV---DPLAPLHK-ICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINP 228 (378)
T ss_pred echhheEEC---CCCCCHHH-hhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCH
Confidence 999888554 99999988 78888899999998876788999999999996 9999999999999999 688888899
Q ss_pred HHHHHHHHHhCCCceeecCCh-hhHHHHHHHHCCCCceEEEECCchh-hHHHHHHhcccC-CEEEEEecccccccccccc
Q 042784 200 DNVKLLKEEFGYDDAFNYNSE-MSFDAALTKYFPNGIDVYLDNVGGK-MLEAVLNHVNVH-ARIILCGMISQYNKVWTER 276 (356)
Q Consensus 200 ~~~~~~~~~~g~~~v~~~~~~-~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~ 276 (356)
++.++++ ++|+++++++++. .++.+.+++++++++|++|||+|.. .+..+++.++++ |+++.+|..... .
T Consensus 229 ~~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~------~ 301 (378)
T PLN02827 229 EKAEKAK-TFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK------P 301 (378)
T ss_pred HHHHHHH-HcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC------c
Confidence 9999998 8999989988642 3677788888766899999999985 789999999998 999999975431 1
Q ss_pred cchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCCCcceEEEEec
Q 042784 277 DGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSSNIGKVVIQVK 354 (356)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 354 (356)
.......++.+++++.++....+. ....++++++++.+|++++ .++++|+|+++++||+.+.+++. .|+||.++
T Consensus 302 -~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~ 377 (378)
T PLN02827 302 -EVSAHYGLFLSGRTLKGSLFGGWK--PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP 377 (378)
T ss_pred -cccccHHHHhcCceEEeeecCCCc--hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence 111123456788999887765442 1345788999999999998 78899999999999999998876 69999876
No 19
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=1.9e-42 Score=315.96 Aligned_cols=313 Identities=18% Similarity=0.225 Sum_probs=255.0
Q ss_pred eeeEEEecccCCCCCCC---CCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeee
Q 042784 13 SKEWYISAYASDGVPTS---DHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAF 89 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~ 89 (356)
||++++..++ .+ +.+++++.+. |.|+++||+||+.++++|++|++...|.+......|..+| +|++
T Consensus 1 m~a~~~~~~~-----~~~~~~~~~~~~~~~----p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G--~e~~ 69 (324)
T cd08291 1 MKALLLEEYG-----KPLEVKELSLPEPEV----PEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPG--FEGS 69 (324)
T ss_pred CeEEEEeecC-----CCccccEEEecccCC----CCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCC--cceE
Confidence 5778877653 23 5677877755 7889999999999999999999988875432212234444 5999
Q ss_pred EEEEEeccCCCC-CCCCCEEEecc----CCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCC
Q 042784 90 GIARVIRSKDSK-YSDGDIVLRAF----LPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKS 164 (356)
Q Consensus 90 G~v~~vg~~v~~-~~~Gd~V~~~~----g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~ 164 (356)
|+|+++|+++.+ +++||+|+ +. |+|+||+.++++.++++ |+++++++ ++++++.++|||.++ ...+. +
T Consensus 70 G~V~~vG~~v~~~~~vGd~V~-~~~~~~g~~a~~~~v~~~~~~~i---P~~~~~~~-aa~~~~~~~ta~~~~-~~~~~-~ 142 (324)
T cd08291 70 GTVVAAGGGPLAQSLIGKRVA-FLAGSYGTYAEYAVADAQQCLPL---PDGVSFEQ-GASSFVNPLTALGML-ETARE-E 142 (324)
T ss_pred EEEEEECCCccccCCCCCEEE-ecCCCCCcchheeeecHHHeEEC---CCCCCHHH-HhhhcccHHHHHHHH-Hhhcc-C
Confidence 999999999996 99999999 43 89999999999887554 99999998 788888999998655 45555 5
Q ss_pred CCEEEEE-cCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCC-CCceEEEECC
Q 042784 165 GSNVFVS-AAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFP-NGIDVYLDNV 242 (356)
Q Consensus 165 g~~VlV~-g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~-~~~d~vld~~ 242 (356)
+++++|+ |++|++|++++|+|+.+|++|+++++++++.+.++ ++|++++++++. .++.+.++++++ +++|++|||+
T Consensus 143 ~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~-~~~~~~v~~~~~~~~~d~vid~~ 220 (324)
T cd08291 143 GAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEYVLNSSD-PDFLEDLKELIAKLNATIFFDAV 220 (324)
T ss_pred CCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEECCC-ccHHHHHHHHhCCCCCcEEEECC
Confidence 6667676 78899999999999999999999999999999999 899999999886 678888888874 5899999999
Q ss_pred chhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccc-hHHHHHHHHHHHHHcCCee
Q 042784 243 GGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMD-RFADFTVEMESYIKEGKIR 321 (356)
Q Consensus 243 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~g~i~ 321 (356)
|+......+++++++|+++.+|...... ....+...++.+++++.++....+.. ...+.++++++++. +.++
T Consensus 221 g~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 293 (324)
T cd08291 221 GGGLTGQILLAMPYGSTLYVYGYLSGKL------DEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELK 293 (324)
T ss_pred CcHHHHHHHHhhCCCCEEEEEEecCCCC------cccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cccc
Confidence 9988888999999999999998754321 11123445677899999887765432 23567888999988 9999
Q ss_pred eeeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 322 SKHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 322 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
+.++++|+|+|+.+||+.+.+++..||+|++
T Consensus 294 ~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 294 TTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred cceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 9999999999999999999999999999974
No 20
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=2.1e-42 Score=317.87 Aligned_cols=302 Identities=15% Similarity=0.108 Sum_probs=241.8
Q ss_pred eeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 12 ESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
.+++.++.+ ++.+++++.+. | +.++||||||.++|||++|++++.+...+.+..++|...|+|++|+
T Consensus 4 ~~~~~~~~~--------~~~~~~~~~~~----p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~ 70 (343)
T PRK09880 4 KTQSCVVAG--------KKDVAVTEQEI----E-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGK 70 (343)
T ss_pred cceEEEEec--------CCceEEEecCC----C-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEE
Confidence 456666653 36789988765 4 4789999999999999999998753222222223344445599999
Q ss_pred EEEeccCCCCCCCCCEEEe----------------------------------ccCCeeeEEeecCCcccccCCCCCCCC
Q 042784 92 ARVIRSKDSKYSDGDIVLR----------------------------------AFLPVAEYSLLPCDLLTRKLDPASGIP 137 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~----------------------------------~~g~~a~~~~v~~~~~~~~i~~P~~~s 137 (356)
|+++ ++++|++||||++ ..|+|+||++++++.++++ |++++
T Consensus 71 V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~---P~~l~ 145 (343)
T PRK09880 71 IVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPY---PEKAD 145 (343)
T ss_pred EEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEEC---CCCCC
Confidence 9999 7889999999983 1388999999999988555 99999
Q ss_pred ccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceee
Q 042784 138 FPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFN 216 (356)
Q Consensus 138 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~ 216 (356)
+++ +++..++.+||+++.+ ....+|++|+|+|+ |++|++++|+|+.+|+ +|++++++++++++++ ++|++.++|
T Consensus 146 ~~~--aa~~~~~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lGa~~vi~ 220 (343)
T PRK09880 146 EKV--MAFAEPLAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMGADKLVN 220 (343)
T ss_pred HHH--HHhhcHHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcCCcEEec
Confidence 876 5677888999999975 45568999999996 9999999999999999 7999999999999999 899999999
Q ss_pred cCChhhHHHHHHHHCCCCceEEEECCchh-hHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEE
Q 042784 217 YNSEMSFDAALTKYFPNGIDVYLDNVGGK-MLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGF 295 (356)
Q Consensus 217 ~~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (356)
+++ .++.+.. +. .+++|++|||+|.+ .+..++++++++|+++.+|..... ...++..++.+++++.++
T Consensus 221 ~~~-~~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~--------~~~~~~~~~~k~~~i~g~ 289 (343)
T PRK09880 221 PQN-DDLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAP--------PEFPMMTLIVKEISLKGS 289 (343)
T ss_pred CCc-ccHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC--------CccCHHHHHhCCcEEEEE
Confidence 876 4444322 22 23699999999984 789999999999999999974321 123455667888998887
Q ss_pred ecccccchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 296 MIGSHMDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 296 ~~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
... .+.++++++++.+|++++ .++++|+|+|+++||+.+.+++..||+|+.+
T Consensus 290 ~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 290 FRF------TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred eec------cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 532 245788999999999975 6788999999999999999888889999864
No 21
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=2e-41 Score=314.04 Aligned_cols=311 Identities=16% Similarity=0.185 Sum_probs=247.1
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||++.+.... +.+++++++. |+|+++||+|||.++++|++|++...|.... .++|...|+|++|+|
T Consensus 2 ~~a~~~~~~~-------~~l~~~~~~~----P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~---~~~p~i~GhE~~G~V 67 (368)
T TIGR02818 2 SRAAVAWAAG-------QPLKIEEVDV----EMPQKGEVLVRIVATGVCHTDAFTLSGADPE---GVFPVILGHEGAGIV 67 (368)
T ss_pred ceEEEEecCC-------CCeEEEEecC----CCCCCCeEEEEEEEecccHHHHHHhcCCCCC---CCCCeeeccccEEEE
Confidence 6677776532 5688888755 7789999999999999999999998875321 223344445999999
Q ss_pred EEeccCCCCCCCCCEEEec--------------------------------------------------cCCeeeEEeec
Q 042784 93 RVIRSKDSKYSDGDIVLRA--------------------------------------------------FLPVAEYSLLP 122 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~--------------------------------------------------~g~~a~~~~v~ 122 (356)
+++|++++++++||||++. .|+|+||++++
T Consensus 68 ~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~ 147 (368)
T TIGR02818 68 EAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVP 147 (368)
T ss_pred EEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEec
Confidence 9999999999999999831 15899999999
Q ss_pred CCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHH
Q 042784 123 CDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDN 201 (356)
Q Consensus 123 ~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~ 201 (356)
++.++++ |+++++++ +|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+||.+|+ +|++++.++++
T Consensus 148 ~~~~~~l---P~~l~~~~-aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~ 222 (368)
T TIGR02818 148 EISLAKI---NPAAPLEE-VCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAK 222 (368)
T ss_pred hhheEEC---CCCCCHHH-hhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHH
Confidence 9888555 99999999 78899999999999977788999999999986 9999999999999999 89999999999
Q ss_pred HHHHHHHhCCCceeecCC-hhhHHHHHHHHCCCCceEEEECCch-hhHHHHHHhcccC-CEEEEEecccccccccccccc
Q 042784 202 VKLLKEEFGYDDAFNYNS-EMSFDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVH-ARIILCGMISQYNKVWTERDG 278 (356)
Q Consensus 202 ~~~~~~~~g~~~v~~~~~-~~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~ 278 (356)
+++++ ++|++.++++.+ ..++.+.+++++++++|++|||+|. ..+..++++++++ |+++.+|...... + .
T Consensus 223 ~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~-----~-~ 295 (368)
T TIGR02818 223 FELAK-KLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQ-----E-I 295 (368)
T ss_pred HHHHH-HhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCC-----c-c
Confidence 99998 899998998764 2456777888776689999999996 4788999999886 9999999754211 0 1
Q ss_pred hhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCee--eeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 279 VRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIR--SKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
......++. +..+.+...+... ....+.++++++.+|++. +.++++|+|+|+++||+.+.+++. .|+++++
T Consensus 296 ~~~~~~~~~-~~~~~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 296 STRPFQLVT-GRVWRGSAFGGVK--GRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred cccHHHHhc-cceEEEeeccCCC--cHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 112222222 3345555433221 234578899999999875 568889999999999999987764 6999875
No 22
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.2e-41 Score=313.45 Aligned_cols=306 Identities=18% Similarity=0.174 Sum_probs=246.2
Q ss_pred eeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 12 ESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
+.|+..+.... .++.+++.+++. |.|+++||+|||.++++|++|++.+.|.+.. ...|..+| +|++|+
T Consensus 4 ~~~a~~~~~~~-----~~~~l~~~~~~~----p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~-~~~p~i~G--hE~aG~ 71 (375)
T PLN02178 4 QNKAFGWAAND-----ESGVLSPFHFSR----RENGENDVTVKILFCGVCHSDLHTIKNHWGF-SRYPIIPG--HEIVGI 71 (375)
T ss_pred cceeEEEEEcc-----CCCCceEEeecC----CCCCCCeEEEEEEEEcCchHHHHHhcCCCCC-CCCCcccC--ceeeEE
Confidence 45666666542 345677777644 6789999999999999999999998874321 12244455 599999
Q ss_pred EEEeccCCCCCCCCCEEEec-------------------------------------cCCeeeEEeecCCcccccCCCCC
Q 042784 92 ARVIRSKDSKYSDGDIVLRA-------------------------------------FLPVAEYSLLPCDLLTRKLDPAS 134 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~-------------------------------------~g~~a~~~~v~~~~~~~~i~~P~ 134 (356)
|+++|+++++|++||||++. .|+|+||++++++.++.+ |+
T Consensus 72 Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~l---P~ 148 (375)
T PLN02178 72 ATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSI---PD 148 (375)
T ss_pred EEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEEC---CC
Confidence 99999999999999999731 478999999999887554 99
Q ss_pred CCCccccccccCchhhhHHHHHHHhCC-CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHhCCC
Q 042784 135 GIPFPDYLSSLGIPGFAAWVGIEVLGQ-PKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDN-VKLLKEEFGYD 212 (356)
Q Consensus 135 ~~s~~~~aa~l~~~~~ta~~~l~~~~~-~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~-~~~~~~~~g~~ 212 (356)
++++++ ++++.+++.|||+++..... .++|++|+|.|+ |++|++++|+||.+|++|++++.++++ .+.++ ++|++
T Consensus 149 ~ls~~~-aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~-~lGa~ 225 (375)
T PLN02178 149 GLPSDS-GAPLLCAGITVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAID-RLGAD 225 (375)
T ss_pred CCCHHH-cchhhccchHHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH-hCCCc
Confidence 999999 78999999999999865443 368999999986 999999999999999999998876554 67776 89999
Q ss_pred ceeecCChhhHHHHHHHHCCCCceEEEECCchh-hHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceE
Q 042784 213 DAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGK-MLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVK 291 (356)
Q Consensus 213 ~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (356)
+++++.+ . +.+.+.++ ++|++|||+|.. .+..++++++++|+++.+|..... ...+...++.++++
T Consensus 226 ~~i~~~~-~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~--------~~~~~~~~~~~~~~ 292 (375)
T PLN02178 226 SFLVTTD-S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKP--------LDLPIFPLVLGRKM 292 (375)
T ss_pred EEEcCcC-H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCC--------CccCHHHHHhCCeE
Confidence 8888764 2 34555444 699999999986 789999999999999999875321 12344556778888
Q ss_pred EEEEecccccchHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEEec
Q 042784 292 MEGFMIGSHMDRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQVK 354 (356)
Q Consensus 292 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 354 (356)
+.++..++. +.+.++++++.+|++++.+ ++|+|+|+++||+.+.+++..||+|+++.
T Consensus 293 i~g~~~~~~-----~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~ 349 (375)
T PLN02178 293 VGGSQIGGM-----KETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDVA 349 (375)
T ss_pred EEEeCccCH-----HHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEec
Confidence 888765432 4578899999999999877 47999999999999999998899999874
No 23
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=5.1e-41 Score=311.84 Aligned_cols=310 Identities=14% Similarity=0.155 Sum_probs=252.3
Q ss_pred eeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 12 ESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
+||++++.... +.++++++++ |+|+++||+|||.++++|++|++.+.|... ..++|...|+|++|+
T Consensus 2 ~~ka~~~~~~~-------~~~~l~~~~~----p~~~~~evlIkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~ 67 (369)
T cd08301 2 TCKAAVAWEAG-------KPLVIEEVEV----APPQAMEVRIKILHTSLCHTDVYFWEAKGQ---TPLFPRILGHEAAGI 67 (369)
T ss_pred ccEEEEEecCC-------CCcEEEEeeC----CCCCCCeEEEEEEEEeeCchhHHHhcCCCC---CCCCCcccccccceE
Confidence 57888887543 5688988866 778999999999999999999998887432 223344445599999
Q ss_pred EEEeccCCCCCCCCCEEEec---------------------------------------------------cCCeeeEEe
Q 042784 92 ARVIRSKDSKYSDGDIVLRA---------------------------------------------------FLPVAEYSL 120 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------~g~~a~~~~ 120 (356)
|+++|+++++|++||||+.. .|+|+||+.
T Consensus 68 V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~ 147 (369)
T cd08301 68 VESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTV 147 (369)
T ss_pred EEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEE
Confidence 99999999999999999831 267999999
Q ss_pred ecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCh
Q 042784 121 LPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSD 199 (356)
Q Consensus 121 v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~ 199 (356)
++.+.++.+ |+++++++ ++.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++
T Consensus 148 v~~~~~~~i---P~~~~~~~-aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~ 222 (369)
T cd08301 148 VHVGCVAKI---NPEAPLDK-VCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNP 222 (369)
T ss_pred EecccEEEC---CCCCCHHH-hhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence 999888555 99999998 78899999999999877889999999999986 9999999999999999 899999999
Q ss_pred HHHHHHHHHhCCCceeecCCh-hhHHHHHHHHCCCCceEEEECCchh-hHHHHHHhcccC-CEEEEEecccccccccccc
Q 042784 200 DNVKLLKEEFGYDDAFNYNSE-MSFDAALTKYFPNGIDVYLDNVGGK-MLEAVLNHVNVH-ARIILCGMISQYNKVWTER 276 (356)
Q Consensus 200 ~~~~~~~~~~g~~~v~~~~~~-~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~ 276 (356)
++.++++ ++|++.++++.+. .++.+.+++++++++|++|||+|.. .+..++++++++ |+++.+|...... .
T Consensus 223 ~~~~~~~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~-----~ 296 (369)
T cd08301 223 SKFEQAK-KFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDA-----V 296 (369)
T ss_pred HHHHHHH-HcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCc-----c
Confidence 9999998 8999988887642 3577778887766899999999875 788899999996 9999999865311 1
Q ss_pred cchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 277 DGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
.......++ +++++.++...++. .+..++++++++.++.++. .++++|+|+|+++||+.+.+++.. |+|+
T Consensus 297 -~~~~~~~~~-~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 297 -FSTHPMNLL-NGRTLKGTLFGGYK--PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred -cccCHHHHh-cCCeEEEEecCCCC--hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 111222233 68899888765542 2345788999999998764 578899999999999999988764 8876
No 24
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=5.5e-41 Score=311.29 Aligned_cols=311 Identities=17% Similarity=0.200 Sum_probs=248.5
Q ss_pred eeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 12 ESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
+||++.+.... +.+++++++. |.|+++||+|||.++++|++|.+.+.|.... ...|+.+| +|++|+
T Consensus 2 ~~~a~~~~~~~-------~~~~~~~~~~----P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~-~~~p~v~G--~E~~G~ 67 (368)
T cd08300 2 TCKAAVAWEAG-------KPLSIEEVEV----APPKAGEVRIKILATGVCHTDAYTLSGADPE-GLFPVILG--HEGAGI 67 (368)
T ss_pred cceEEEEecCC-------CCcEEEEeec----CCCCCCEEEEEEEEEEechhhHHHhcCCCcc-CCCCceec--cceeEE
Confidence 47777776542 5688888865 7789999999999999999999998875321 12334444 599999
Q ss_pred EEEeccCCCCCCCCCEEEec--------------------------------------------------cCCeeeEEee
Q 042784 92 ARVIRSKDSKYSDGDIVLRA--------------------------------------------------FLPVAEYSLL 121 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~--------------------------------------------------~g~~a~~~~v 121 (356)
|+++|+++++|++||||+.. .|+|+||+.+
T Consensus 68 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v 147 (368)
T cd08300 68 VESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVV 147 (368)
T ss_pred EEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEE
Confidence 99999999999999999831 2589999999
Q ss_pred cCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChH
Q 042784 122 PCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDD 200 (356)
Q Consensus 122 ~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~ 200 (356)
+++.++++ |+++++++ ++.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+||.+|+ +|++++++++
T Consensus 148 ~~~~~~~i---P~~l~~~~-aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~ 222 (368)
T cd08300 148 AEISVAKI---NPEAPLDK-VCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPD 222 (368)
T ss_pred chhceEeC---CCCCChhh-hhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 99888554 99999998 78899999999999877788999999999985 9999999999999999 7999999999
Q ss_pred HHHHHHHHhCCCceeecCCh-hhHHHHHHHHCCCCceEEEECCch-hhHHHHHHhcccC-CEEEEEeccccccccccccc
Q 042784 201 NVKLLKEEFGYDDAFNYNSE-MSFDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVH-ARIILCGMISQYNKVWTERD 277 (356)
Q Consensus 201 ~~~~~~~~~g~~~v~~~~~~-~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~ 277 (356)
+.+.++ ++|+++++++++. +++.+.+.+++++++|+||||+|. ..+..++++++++ |+++.+|...... +
T Consensus 223 ~~~~~~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~-----~- 295 (368)
T cd08300 223 KFELAK-KFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQ-----E- 295 (368)
T ss_pred HHHHHH-HcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCC-----c-
Confidence 999998 8999999998752 257888888886689999999997 5889999999886 9999999753211 0
Q ss_pred chhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 278 GVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
.......+. ++..+.++..+.+. ..+.+.++++++.+|++++ .++++|+|+|+++||+.+.+++. .|++++
T Consensus 296 ~~~~~~~~~-~~~~~~g~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 296 ISTRPFQLV-TGRVWKGTAFGGWK--SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred cccCHHHHh-hcCeEEEEEecccC--cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 111111222 23455555444332 2356788999999999875 58889999999999999987764 588874
No 25
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.8e-41 Score=286.55 Aligned_cols=311 Identities=16% Similarity=0.172 Sum_probs=256.8
Q ss_pred eeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 12 ESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
++||.+..... ++|.++|+++ ++|+.+||+||++++++|++|....+|.. ....+|...|+|..|+
T Consensus 7 ~CKAAV~w~a~-------~PL~IEei~V----~pPka~EVRIKI~~t~vCHTD~~~~~g~~---~~~~fP~IlGHEaaGI 72 (375)
T KOG0022|consen 7 TCKAAVAWEAG-------KPLVIEEIEV----APPKAHEVRIKILATGVCHTDAYVWSGKD---PEGLFPVILGHEAAGI 72 (375)
T ss_pred EEeEeeeccCC-------CCeeEEEEEe----CCCCCceEEEEEEEEeeccccceeecCCC---ccccCceEecccceeE
Confidence 46666666443 8999999999 88999999999999999999999998753 2333455555599999
Q ss_pred EEEeccCCCCCCCCCEEEec---------------------------------------------------cCCeeeEEe
Q 042784 92 ARVIRSKDSKYSDGDIVLRA---------------------------------------------------FLPVAEYSL 120 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------~g~~a~~~~ 120 (356)
|+.+|.+|.++++||+|+-. ..+|+||.+
T Consensus 73 VESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTV 152 (375)
T KOG0022|consen 73 VESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTV 152 (375)
T ss_pred EEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEE
Confidence 99999999999999999920 047999999
Q ss_pred ecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCh
Q 042784 121 LPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSD 199 (356)
Q Consensus 121 v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~ 199 (356)
++...+.. | ++..+++. ++.|.|...|+|.|..+.+++++|++|.|.|- |++|+++++-||+.|+ +|++++.++
T Consensus 153 v~~~~v~k-I--d~~aPl~k-vcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgvDiN~ 227 (375)
T KOG0022|consen 153 VDDISVAK-I--DPSAPLEK-VCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGVDINP 227 (375)
T ss_pred eecceeEe-c--CCCCChhh-eeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEEecCH
Confidence 99988844 5 66788888 79999999999999999999999999999996 9999999999999999 999999999
Q ss_pred HHHHHHHHHhCCCceeecCCh-hhHHHHHHHHCCCCceEEEECCch-hhHHHHHHhcccC-CEEEEEecccccccccccc
Q 042784 200 DNVKLLKEEFGYDDAFNYNSE-MSFDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVH-ARIILCGMISQYNKVWTER 276 (356)
Q Consensus 200 ~~~~~~~~~~g~~~v~~~~~~-~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~ 276 (356)
++.+.++ +||+.+++|..+. ....+.|.++|++|+|+-|||+|+ +.+.+++.+...+ |+-+.+|...... .
T Consensus 228 ~Kf~~ak-~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~-----~ 301 (375)
T KOG0022|consen 228 DKFEKAK-EFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQ-----E 301 (375)
T ss_pred HHHHHHH-hcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCc-----c
Confidence 9999999 9999999998743 348889999999999999999998 4888999999888 9999999876522 1
Q ss_pred cchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCe--eeeeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 277 DGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKI--RSKHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
....... +.++.++.+...+.+.. ...+..+.+.+.++++ ...|++.+||+++++||++|.+++.. |.|+.
T Consensus 302 -i~~~p~~-l~~GR~~~Gs~FGG~K~--~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 302 -ISTRPFQ-LVTGRTWKGSAFGGFKS--KSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred -cccchhh-hccccEEEEEecccccc--hhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 1122222 33466667776666543 2456667777777765 46799999999999999999999876 77765
No 26
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.3e-40 Score=307.33 Aligned_cols=306 Identities=19% Similarity=0.187 Sum_probs=249.2
Q ss_pred eeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 12 ESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
++++|.+.+.+ +.+.+++++. |.++++||+|||.++++|++|++.+.|... ....|..+| +|++|+
T Consensus 9 ~~~~~~~~~~~-------~~~~~~~~~~----p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~-~~~~p~i~G--~E~~G~ 74 (357)
T PLN02514 9 KTTGWAARDPS-------GHLSPYTYTL----RKTGPEDVVIKVIYCGICHTDLHQIKNDLG-MSNYPMVPG--HEVVGE 74 (357)
T ss_pred eEEEEEEecCC-------CCceEEeecC----CCCCCCcEEEEEEEeccChHHHHhhcCCcC-cCCCCccCC--ceeeEE
Confidence 36788877653 6688888765 778999999999999999999998886432 112234444 599999
Q ss_pred EEEeccCCCCCCCCCEEEec-------------------------------------cCCeeeEEeecCCcccccCCCCC
Q 042784 92 ARVIRSKDSKYSDGDIVLRA-------------------------------------FLPVAEYSLLPCDLLTRKLDPAS 134 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~-------------------------------------~g~~a~~~~v~~~~~~~~i~~P~ 134 (356)
|+++|+++++|++||+|++. .|+|+||++++.+.++++ |+
T Consensus 75 Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~i---P~ 151 (357)
T PLN02514 75 VVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKI---PE 151 (357)
T ss_pred EEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEEC---CC
Confidence 99999999999999999731 388999999999887554 99
Q ss_pred CCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCce
Q 042784 135 GIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDA 214 (356)
Q Consensus 135 ~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v 214 (356)
++++++ ++++++++.|||+++......++|++|+|+|+ |++|++++|+||..|++|++++.++++.+.+.+++|++.+
T Consensus 152 ~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~ 229 (357)
T PLN02514 152 GMAPEQ-AAPLLCAGVTVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDY 229 (357)
T ss_pred CCCHHH-hhhhhhhHHHHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEE
Confidence 999998 78999999999999987676789999999975 9999999999999999999888888877766548999877
Q ss_pred eecCChhhHHHHHHHHCCCCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEE
Q 042784 215 FNYNSEMSFDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKME 293 (356)
Q Consensus 215 ~~~~~~~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (356)
+++.+ . +.+.+.+ .++|++|||+|. ..+..++++++++|+++.+|..... ...+...++.+++++.
T Consensus 230 i~~~~-~---~~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~--------~~~~~~~~~~~~~~i~ 296 (357)
T PLN02514 230 LVSSD-A---AEMQEAA-DSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTP--------LQFVTPMLMLGRKVIT 296 (357)
T ss_pred ecCCC-h---HHHHHhc-CCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCC--------CcccHHHHhhCCcEEE
Confidence 77654 2 2344444 369999999996 5888999999999999999976431 1233445667888998
Q ss_pred EEecccccchHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEEecC
Q 042784 294 GFMIGSHMDRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQVKA 355 (356)
Q Consensus 294 ~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (356)
++...+. ..++++++++.+|++++.++ +|+++|+.+||+.+.+++..||+|++++.
T Consensus 297 g~~~~~~-----~~~~~~~~~~~~g~l~~~i~-~~~l~~~~~A~~~~~~~~~~gk~v~~~~~ 352 (357)
T PLN02514 297 GSFIGSM-----KETEEMLEFCKEKGLTSMIE-VVKMDYVNTAFERLEKNDVRYRFVVDVAG 352 (357)
T ss_pred EEecCCH-----HHHHHHHHHHHhCCCcCcEE-EEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence 8866542 45788999999999988774 89999999999999999988999998763
No 27
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.7e-40 Score=303.02 Aligned_cols=285 Identities=15% Similarity=0.095 Sum_probs=235.7
Q ss_pred CCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEEEeccCCCCCCCCCEEE
Q 042784 30 DHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVL 109 (356)
Q Consensus 30 ~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~ 109 (356)
+.+++++.|. |.|+++||+|||.++++|++|.+.+.|..... .+|..+| +|++|+|+++|++++.+++||+|+
T Consensus 13 ~~l~~~~~p~----P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~-~~p~i~G--~e~~G~V~~vG~~v~~~~~Gd~V~ 85 (329)
T TIGR02822 13 GPLRFVERPV----PRPGPGELLVRVRACGVCRTDLHVSEGDLPVH-RPRVTPG--HEVVGEVAGRGADAGGFAVGDRVG 85 (329)
T ss_pred CCceEEeCCC----CCCCCCeEEEEEEEEeecchhHHHHcCCCCCC-CCCccCC--cceEEEEEEECCCCcccCCCCEEE
Confidence 5789988755 78999999999999999999999998753211 2234445 599999999999999999999997
Q ss_pred ec------------------------------cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHh
Q 042784 110 RA------------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVL 159 (356)
Q Consensus 110 ~~------------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~ 159 (356)
+. .|+|+||+.++.+.++.+ |+++++++ ++++++.+.|||+++. .
T Consensus 86 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~l---P~~~~~~~-aa~l~~~~~ta~~~~~-~ 160 (329)
T TIGR02822 86 IAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRL---PTGYDDVE-LAPLLCAGIIGYRALL-R 160 (329)
T ss_pred EcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEEC---CCCCCHHH-hHHHhccchHHHHHHH-h
Confidence 31 389999999999888554 99999998 7889999999999996 5
Q ss_pred CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEE
Q 042784 160 GQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYL 239 (356)
Q Consensus 160 ~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vl 239 (356)
+++++|++|||+|+ |++|++++|+|+..|++|++++++++++++++ ++|+++++++.+ .. .+++|+++
T Consensus 161 ~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~-~~Ga~~vi~~~~-~~---------~~~~d~~i 228 (329)
T TIGR02822 161 ASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLAL-ALGAASAGGAYD-TP---------PEPLDAAI 228 (329)
T ss_pred cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HhCCceeccccc-cC---------cccceEEE
Confidence 88999999999997 99999999999999999999999999999999 999998887542 10 13689999
Q ss_pred ECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcC
Q 042784 240 DNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEG 318 (356)
Q Consensus 240 d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g 318 (356)
++.+. ..+..++++++++|+++.+|...... ...+...++.+++++.+..... .+.+.++++++.+|
T Consensus 229 ~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~-------~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g 296 (329)
T TIGR02822 229 LFAPAGGLVPPALEALDRGGVLAVAGIHLTDT-------PPLNYQRHLFYERQIRSVTSNT-----RADAREFLELAAQH 296 (329)
T ss_pred ECCCcHHHHHHHHHhhCCCcEEEEEeccCccC-------CCCCHHHHhhCCcEEEEeecCC-----HHHHHHHHHHHHhC
Confidence 88765 58899999999999999999753311 1123445567788888765432 24567889999999
Q ss_pred CeeeeeeEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 319 KIRSKHVIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 319 ~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
++++ ++++|+|+|+++||+.+.+++..||+|+
T Consensus 297 ~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 297 GVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred CCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 9974 5789999999999999999999999987
No 28
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=2.9e-40 Score=304.40 Aligned_cols=311 Identities=19% Similarity=0.178 Sum_probs=242.9
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCC-CCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSI-PDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
||++++... +.+++++.++ |.| .++||+|||.++++|++|.+.+.+. +....|..+| +|++|+
T Consensus 1 Mka~~~~~~--------~~~~~~~~~~----P~~~~~~evlV~v~~~gi~~~D~~~~~~~--~~~~~p~i~G--~e~~G~ 64 (347)
T PRK10309 1 MKSVVNDTD--------GIVRVAESPI----PEIKHQDDVLVKVASSGLCGSDIPRIFKN--GAHYYPITLG--HEFSGY 64 (347)
T ss_pred CceEEEeCC--------CceEEEECCC----CCCCCCCEEEEEEEEEEEchhcHHHHhCC--CCCCCCcccc--cceEEE
Confidence 567777643 3588888765 666 5899999999999999998754321 1112234444 599999
Q ss_pred EEEeccCCCCCCCCCEEEec-----------------------------cCCeeeEEeecCCcccccCCCCCCCCccccc
Q 042784 92 ARVIRSKDSKYSDGDIVLRA-----------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYL 142 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~-----------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~a 142 (356)
|+++|+++++|++||+|+.. .|+|+||+.++++.++.+ |+++++++ +
T Consensus 65 V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~l---P~~~s~~~-a 140 (347)
T PRK10309 65 VEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFAL---PTDMPIED-G 140 (347)
T ss_pred EEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEEC---cCCCCHHH-h
Confidence 99999999999999999831 489999999999887554 99999988 5
Q ss_pred cccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHhCCCceeecCChh
Q 042784 143 SSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCK-VVGSTGSDDNVKLLKEEFGYDDAFNYNSEM 221 (356)
Q Consensus 143 a~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~-V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 221 (356)
+.+ ....++++++ +..++++|++|+|+|+ |++|++++|+|+.+|++ |+++++++++.+.++ ++|+++++++++ .
T Consensus 141 a~~-~~~~~~~~~~-~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~-~ 215 (347)
T PRK10309 141 AFI-EPITVGLHAF-HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAK-SLGAMQTFNSRE-M 215 (347)
T ss_pred hhh-hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCceEecCcc-c
Confidence 544 3566688886 4678899999999985 99999999999999995 788988999999998 899998998875 3
Q ss_pred hHHHHHHHHC-CCCce-EEEECCchh-hHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecc
Q 042784 222 SFDAALTKYF-PNGID-VYLDNVGGK-MLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIG 298 (356)
Q Consensus 222 ~~~~~i~~~~-~~~~d-~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (356)
+ .+.+.+++ +.++| ++|||+|.. .+..++++++++|+++.+|...... .........++.+++++.++..+
T Consensus 216 ~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~~~~~~~~~~~~~i~g~~~~ 289 (347)
T PRK10309 216 S-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDL-----HLTSATFGKILRKELTVIGSWMN 289 (347)
T ss_pred C-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCc-----ccChhhhhHHhhcCcEEEEEecc
Confidence 3 44566665 45788 999999975 8899999999999999999764311 11111233567788999987654
Q ss_pred cccchHHHHHHHHHHHHHcCCee--eeeeEEeChhhHHHHHHHHHcCCCcceEEEEec
Q 042784 299 SHMDRFADFTVEMESYIKEGKIR--SKHVIYYGVESFLESLGSLFSSSNIGKVVIQVK 354 (356)
Q Consensus 299 ~~~~~~~~~l~~~~~~~~~g~i~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 354 (356)
.......+.++++++++.+|.+. +.++++|+|+|+++|++.+.+++..||+|++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 347 (347)
T PRK10309 290 YSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP 347 (347)
T ss_pred ccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence 22111135678899999999984 678899999999999999999888899999864
No 29
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=4e-40 Score=305.22 Aligned_cols=308 Identities=16% Similarity=0.169 Sum_probs=248.9
Q ss_pred eeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 12 ESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
++|++++...+ +.+++++++. |.++++||+|||.++++|++|++.+.|... ..+|...++|++|+
T Consensus 2 ~~ka~~~~~~~-------~~~~~~~~~~----p~~~~~evlVkv~~~gi~~sD~~~~~g~~~----~~~p~i~G~e~~G~ 66 (365)
T cd08277 2 KCKAAVAWEAG-------KPLVIEEIEV----APPKANEVRIKMLATSVCHTDILAIEGFKA----TLFPVILGHEGAGI 66 (365)
T ss_pred ccEEEEEccCC-------CCcEEEEEEC----CCCCCCEEEEEEEEEeechhhHHHhcCCCC----CCCCeecccceeEE
Confidence 47788777542 4588888866 778999999999999999999999887432 23344445599999
Q ss_pred EEEeccCCCCCCCCCEEEec-------------------------------------------------cCCeeeEEeec
Q 042784 92 ARVIRSKDSKYSDGDIVLRA-------------------------------------------------FLPVAEYSLLP 122 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~-------------------------------------------------~g~~a~~~~v~ 122 (356)
|+++|++++++++||+|+.. .|+|+||+.++
T Consensus 67 V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~ 146 (365)
T cd08277 67 VESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVD 146 (365)
T ss_pred EEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEc
Confidence 99999999999999999831 37899999999
Q ss_pred CCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHH
Q 042784 123 CDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDN 201 (356)
Q Consensus 123 ~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~ 201 (356)
.+.++.+ |+++++++ ++.+.+++.|||+++...+++++|++|+|+|+ |++|++++++|+.+|+ +|+++++++++
T Consensus 147 ~~~~~~l---P~~l~~~~-aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~ 221 (365)
T cd08277 147 ENYVAKI---DPAAPLEH-VCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDK 221 (365)
T ss_pred hhheEEC---CCCCCHHH-hhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHH
Confidence 9888555 99999998 78899999999999877788999999999985 9999999999999999 89999999999
Q ss_pred HHHHHHHhCCCceeecCCh-hhHHHHHHHHCCCCceEEEECCch-hhHHHHHHhcccC-CEEEEEecccccccccccccc
Q 042784 202 VKLLKEEFGYDDAFNYNSE-MSFDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVH-ARIILCGMISQYNKVWTERDG 278 (356)
Q Consensus 202 ~~~~~~~~g~~~v~~~~~~-~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~ 278 (356)
++.++ ++|+++++++.+. .++.+.+++++++++|++|||+|. ..+..++++++++ |+++.+|...+.. .
T Consensus 222 ~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~-------~ 293 (365)
T cd08277 222 FEKAK-EFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAE-------L 293 (365)
T ss_pred HHHHH-HcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccc-------c
Confidence 99998 8999989887642 245677877776789999999996 5778999999885 9999999764311 1
Q ss_pred hhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCee--eeeeEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 279 VRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIR--SKHVIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
..+...++. ++++.++..+++. ....++++++++.++.+. +.++++|+|+|+++||+.+.+++ ..|+++
T Consensus 294 ~~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i 364 (365)
T cd08277 294 SIRPFQLIL-GRTWKGSFFGGFK--SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVI 364 (365)
T ss_pred ccCHhHHhh-CCEEEeeecCCCC--hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEee
Confidence 112223332 6788877665542 224578899999988754 57888999999999999998877 468886
No 30
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=100.00 E-value=6.1e-40 Score=276.75 Aligned_cols=340 Identities=41% Similarity=0.730 Sum_probs=296.7
Q ss_pred eeeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeE
Q 042784 11 VESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFG 90 (356)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G 90 (356)
...++|+++.+.+ +.+...++.+++..+..+ ..+++++||||.++.+..|+.+..++......+.+++.+|..+.+.|
T Consensus 2 v~nkqvvLk~y~~-g~P~~~d~~~~~~~~el~-~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~G 79 (343)
T KOG1196|consen 2 VTNKQVILKNYVT-GFPTESDFEFTTTTVELR-VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFG 79 (343)
T ss_pred ccccEEEEeccCC-CCCccccceeeeeeeccc-CCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCc
Confidence 4578999999865 777778888877665432 56899999999999999999988777433344778899999888899
Q ss_pred EEEEeccCCCCCCCCCEEEeccCCeeeEEeecCC-cccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEE
Q 042784 91 IARVIRSKDSKYSDGDIVLRAFLPVAEYSLLPCD-LLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVF 169 (356)
Q Consensus 91 ~v~~vg~~v~~~~~Gd~V~~~~g~~a~~~~v~~~-~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~Vl 169 (356)
+...+.++.+++++||.|+ +.-+|.||.+++.. ...++|+.|.++++.....++..+++|||-.+.+++..+.|++|+
T Consensus 80 V~kVi~S~~~~~~~GD~v~-g~~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~ 158 (343)
T KOG1196|consen 80 VAKVIDSGHPNYKKGDLVW-GIVGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVF 158 (343)
T ss_pred eEEEEecCCCCCCcCceEE-EeccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEE
Confidence 9999999999999999999 77799999999764 444567667777766666899999999999999999999999999
Q ss_pred EEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchhhHHH
Q 042784 170 VSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEA 249 (356)
Q Consensus 170 V~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~ 249 (356)
|.||+|.+|.++.|+||.+|++|++++.|+++..+++.+||.+..|||.++.++.+.+++..+.|+|+.||++|+..+..
T Consensus 159 VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDa 238 (343)
T KOG1196|consen 159 VSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDA 238 (343)
T ss_pred EeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999668999999988899999999999999999
Q ss_pred HHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeeeeeeEEeC
Q 042784 250 VLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRSKHVIYYG 329 (356)
Q Consensus 250 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~~~~~~~ 329 (356)
.+..|+..|+++.+|+.+..+.. .+....+....+.|.+.+.++-...+.+.+++.++.+..++++|+|+..-+..-.
T Consensus 239 vl~nM~~~gri~~CG~ISqYN~~--~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~G 316 (343)
T KOG1196|consen 239 VLLNMNLHGRIAVCGMISQYNLE--NPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIADG 316 (343)
T ss_pred HHHhhhhccceEeeeeehhcccc--CCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHHHH
Confidence 99999999999999987753321 2233445667788999999998888888899999999999999999988887778
Q ss_pred hhhHHHHHHHHHcCCCcceEEEEecC
Q 042784 330 VESFLESLGSLFSSSNIGKVVIQVKA 355 (356)
Q Consensus 330 ~~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (356)
|+..++||.-|.+++..||.++++..
T Consensus 317 len~P~A~vglf~GkNvGKqiv~va~ 342 (343)
T KOG1196|consen 317 LENGPSALVGLFHGKNVGKQLVKVAR 342 (343)
T ss_pred HhccHHHHHHHhccCcccceEEEeec
Confidence 99999999999999999999999874
No 31
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=8.1e-40 Score=298.69 Aligned_cols=315 Identities=19% Similarity=0.172 Sum_probs=257.8
Q ss_pred eeeEEEecccCCCCCCC-CCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 13 SKEWYISAYASDGVPTS-DHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
||+++++++ +.+ +.+++++++. |.+.++||+|||.++++|+.|++...|........|..+| +|++|+
T Consensus 1 m~a~~~~~~-----~~~~~~~~~~~~~~----p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G--~e~~G~ 69 (324)
T cd08292 1 MRAAVHTQF-----GDPADVLEIGEVPK----PTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGG--SEAVGV 69 (324)
T ss_pred CeeEEEccC-----CChhHeEEEeecCC----CCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCC--cceEEE
Confidence 467777653 222 4588888865 6789999999999999999999988765432112233444 589999
Q ss_pred EEEeccCCCCCCCCCEEEec--cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEE
Q 042784 92 ARVIRSKDSKYSDGDIVLRA--FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVF 169 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~--~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~Vl 169 (356)
|+++|++++++++||+|+.. .|+|++|+.++.+.++++ |+++++++ ++.+++.+++||+++. .+++++|++|+
T Consensus 70 V~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~i---p~~~~~~~-aa~~~~~~~ta~~~~~-~~~~~~g~~vl 144 (324)
T cd08292 70 VDAVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPL---PDGISDEV-AAQLIAMPLSALMLLD-FLGVKPGQWLI 144 (324)
T ss_pred EEEeCCCCCCCCCCCEEEeccCCCcceeEEEEchHHeEEC---CCCCCHHH-hhhccccHHHHHHHHH-hhCCCCCCEEE
Confidence 99999999999999999932 589999999999887554 99999998 7888889999999985 58899999999
Q ss_pred EEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCC-CCceEEEECCchhhHH
Q 042784 170 VSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFP-NGIDVYLDNVGGKMLE 248 (356)
Q Consensus 170 V~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~-~~~d~vld~~g~~~~~ 248 (356)
|+|++|.+|++++++|+.+|++|++++.++++.+.++ ++|+++++++.+ .++.+.+.++++ .++|++|||+|+....
T Consensus 145 I~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~i~~~~~~~~~d~v~d~~g~~~~~ 222 (324)
T cd08292 145 QNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR-ALGIGPVVSTEQ-PGWQDKVREAAGGAPISVALDSVGGKLAG 222 (324)
T ss_pred EcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-hcCCCEEEcCCC-chHHHHHHHHhCCCCCcEEEECCCChhHH
Confidence 9999999999999999999999999998999999998 689988888876 678888888874 5899999999998889
Q ss_pred HHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccc-----hHHHHHHHHHHHHHcCCeeee
Q 042784 249 AVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMD-----RFADFTVEMESYIKEGKIRSK 323 (356)
Q Consensus 249 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~g~i~~~ 323 (356)
.++++++++|+++.+|..... . ........+.+++++.++....+.. ...+.++++++++.+|.+.+.
T Consensus 223 ~~~~~l~~~g~~v~~g~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~ 295 (324)
T cd08292 223 ELLSLLGEGGTLVSFGSMSGE------P-MQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP 295 (324)
T ss_pred HHHHhhcCCcEEEEEecCCCC------C-CcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc
Confidence 999999999999999875321 1 1123334566899999887654321 234678889999999999876
Q ss_pred eeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 324 HVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 324 ~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
+.+.|+++++.+|++.+.++...+|+|++
T Consensus 296 ~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 296 VEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 77789999999999999988888899874
No 32
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=2.2e-39 Score=298.62 Aligned_cols=295 Identities=15% Similarity=0.120 Sum_probs=239.0
Q ss_pred CeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEEEeccCCCCCCCCCEEEe
Q 042784 31 HLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVLR 110 (356)
Q Consensus 31 ~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~~ 110 (356)
.+++++.+. |.++++||+|||.++++|++|.+...+........|..+ |+|++|+|+++|+++..+ +||||++
T Consensus 10 ~~~~~~~p~----P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~--GhE~~G~V~~vG~~v~~~-~GdrV~~ 82 (349)
T TIGR03201 10 PMVKTRVEI----PELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLAL--GHEISGRVIQAGAGAASW-IGKAVIV 82 (349)
T ss_pred CceEEeccC----CCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeec--cccceEEEEEeCCCcCCC-CCCEEEE
Confidence 378888755 779999999999999999999988743221111223444 459999999999999887 9999984
Q ss_pred -----------------------------ccCCeeeEEeecCCcccccCCCCC------CCCccccccccCchhhhHHHH
Q 042784 111 -----------------------------AFLPVAEYSLLPCDLLTRKLDPAS------GIPFPDYLSSLGIPGFAAWVG 155 (356)
Q Consensus 111 -----------------------------~~g~~a~~~~v~~~~~~~~i~~P~------~~s~~~~aa~l~~~~~ta~~~ 155 (356)
..|+|+||+.++.+.++.. |+ ++++++ ++++++++.|||++
T Consensus 83 ~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~i---p~~~~~~~~~~~~~-~a~~~~~~~ta~~a 158 (349)
T TIGR03201 83 PAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVV---DEARLAAAGLPLEH-VSVVADAVTTPYQA 158 (349)
T ss_pred CCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEEC---CcccccccCCCHHH-hhhhcchHHHHHHH
Confidence 1489999999999887554 76 899988 78899999999999
Q ss_pred HHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCCh--hhHHHHHHHHCC-
Q 042784 156 IEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSE--MSFDAALTKYFP- 232 (356)
Q Consensus 156 l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~--~~~~~~i~~~~~- 232 (356)
+. ..++++|++|+|+|+ |++|++++++|+..|++|++++++++++++++ ++|++.++++.+. .++.+.++++++
T Consensus 159 ~~-~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~~~~~~~~t~~ 235 (349)
T TIGR03201 159 AV-QAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK-GFGADLTLNPKDKSAREVKKLIKAFAKA 235 (349)
T ss_pred HH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceEecCccccHHHHHHHHHhhccc
Confidence 96 478999999999998 99999999999999999999999999999998 8999988887652 357777888774
Q ss_pred CCce----EEEECCchh-hHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHH
Q 042784 233 NGID----VYLDNVGGK-MLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADF 307 (356)
Q Consensus 233 ~~~d----~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (356)
.++| ++|||+|.. .+..++++++++|+++.+|..... ...+...++.++.++.+....+ .+.
T Consensus 236 ~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~--------~~~~~~~~~~~~~~~~g~~~~~-----~~~ 302 (349)
T TIGR03201 236 RGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK--------TEYRLSNLMAFHARALGNWGCP-----PDR 302 (349)
T ss_pred CCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC--------cccCHHHHhhcccEEEEEecCC-----HHH
Confidence 4776 899999985 677889999999999999986431 1123345566677777765322 246
Q ss_pred HHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 308 TVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 308 l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
++++++++.+|++.+ .++ +|+|+++++||+.+.+++..||+++++
T Consensus 303 ~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 303 YPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred HHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence 788999999999865 444 799999999999999999899999853
No 33
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=2.9e-39 Score=298.24 Aligned_cols=305 Identities=16% Similarity=0.171 Sum_probs=247.9
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCc--------cCCCccCc
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLY--------FPQFNLNQ 84 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~--------~~~~~~g~ 84 (356)
||+|++... +.++++++++ |.++++||+||+.++++|+.|++.+.+...... ..+++...
T Consensus 1 mka~~~~~~--------~~l~~~~~~~----p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~ 68 (351)
T cd08233 1 MKAARYHGR--------KDIRVEEVPE----PPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTL 68 (351)
T ss_pred CceEEEecC--------CceEEEeccC----CCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCcee
Confidence 578888742 5688988765 778999999999999999999887653211000 01133344
Q ss_pred eeeeeEEEEEeccCCCCCCCCCEEEe----------------------------c--cCCeeeEEeecCCcccccCCCCC
Q 042784 85 VILAFGIARVIRSKDSKYSDGDIVLR----------------------------A--FLPVAEYSLLPCDLLTRKLDPAS 134 (356)
Q Consensus 85 ~~~~~G~v~~vg~~v~~~~~Gd~V~~----------------------------~--~g~~a~~~~v~~~~~~~~i~~P~ 134 (356)
|+|++|+|+++|++++++++||+|+. . .|+|++|+.++.+.++.+ |+
T Consensus 69 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~l---P~ 145 (351)
T cd08233 69 GHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKL---PD 145 (351)
T ss_pred cccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEEC---cC
Confidence 45999999999999999999999983 1 489999999999887555 99
Q ss_pred CCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCc
Q 042784 135 GIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDD 213 (356)
Q Consensus 135 ~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~ 213 (356)
++++++ ++. ..++.|||+++ ..+++++|++|+|+|+ |++|.+++|+|+..|+ +|+++++++++.++++ ++|++.
T Consensus 146 ~~~~~~-aa~-~~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~ga~~ 220 (351)
T cd08233 146 NVPLEE-AAL-VEPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAE-ELGATI 220 (351)
T ss_pred CCCHHH-hhh-ccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCE
Confidence 999988 444 47889999999 5788999999999985 9999999999999999 8999998999999998 899999
Q ss_pred eeecCChhhHHHHHHHHCC-CCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceE
Q 042784 214 AFNYNSEMSFDAALTKYFP-NGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVK 291 (356)
Q Consensus 214 v~~~~~~~~~~~~i~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (356)
++++++ .++.+.+++.++ +++|++|||+|. ..+..++++++++|+++.+|..... ...+...++.++++
T Consensus 221 ~i~~~~-~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--------~~~~~~~~~~~~~~ 291 (351)
T cd08233 221 VLDPTE-VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKP--------ISFNPNDLVLKEKT 291 (351)
T ss_pred EECCCc-cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCC--------CccCHHHHHhhCcE
Confidence 999887 678888888775 479999999985 5889999999999999999975421 12344556778899
Q ss_pred EEEEecccccchHHHHHHHHHHHHHcCCee--eeeeEEeChhhH-HHHHHHHHcCCCc-ceEEE
Q 042784 292 MEGFMIGSHMDRFADFTVEMESYIKEGKIR--SKHVIYYGVESF-LESLGSLFSSSNI-GKVVI 351 (356)
Q Consensus 292 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~--~~~~~~~~~~~~-~~a~~~~~~~~~~-gkvvi 351 (356)
+.+..... .+.++++++++.++.++ +.++++|+++|+ ++|++.+.+++.. +|+|+
T Consensus 292 i~g~~~~~-----~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 292 LTGSICYT-----REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred EEEEeccC-----cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 98875432 25678999999999995 457789999996 7899999988874 89987
No 34
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=1.9e-39 Score=272.05 Aligned_cols=320 Identities=19% Similarity=0.245 Sum_probs=259.0
Q ss_pred eeeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeE
Q 042784 11 VESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFG 90 (356)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G 90 (356)
...|++.|..++ ...+.+++.++++ |....++|+||.+|+.|||+|+.+++|.+.-. +++|..-|.||.|
T Consensus 18 ~~~kalvY~~hg----dP~kVlql~~~~~----p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvr--P~~PAVgGnEGv~ 87 (354)
T KOG0025|consen 18 ARSKALVYSEHG----DPAKVLQLKNLEL----PAVPGSDVLVKMLAAPINPSDINQIQGVYPVR--PELPAVGGNEGVG 87 (354)
T ss_pred cccceeeecccC----CchhhheeecccC----CCCCCCceeeeeeecCCChHHhhhhccccCCC--CCCCcccCCcceE
Confidence 346788888876 4458889999987 67777789999999999999999999877654 4455555569999
Q ss_pred EEEEeccCCCCCCCCCEEEe---ccCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCE
Q 042784 91 IARVIRSKDSKYSDGDIVLR---AFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSN 167 (356)
Q Consensus 91 ~v~~vg~~v~~~~~Gd~V~~---~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 167 (356)
.|+.+|+++++|++||.|+. +.|+|++|.+..++.++. + ++.++++. ||++....+|||.+|.+.-++.+||+
T Consensus 88 eVv~vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~-v--d~~~pl~~-AAT~~VNP~TAyrmL~dfv~L~~GD~ 163 (354)
T KOG0025|consen 88 EVVAVGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIK-V--DKDIPLAS-AATLSVNPCTAYRMLKDFVQLNKGDS 163 (354)
T ss_pred EEEEecCCcCccCCCCeEeecCCCCccceeeEeecccceEE-c--CCcCChhh-hheeccCchHHHHHHHHHHhcCCCCe
Confidence 99999999999999999993 469999999999998844 4 77899999 89999999999999999999999999
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHHHHHC--CCCceEEEECC
Q 042784 168 VFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAALTKYF--PNGIDVYLDNV 242 (356)
Q Consensus 168 VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~--~~~~d~vld~~ 242 (356)
|.-+||.+++|.+.+|+||++|.+-+-+.|+-.+.+.+++ .+||++|+...+ --.....+.. ..++.+.|+|+
T Consensus 164 vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeee--l~~~~~~k~~~~~~~prLalNcV 241 (354)
T KOG0025|consen 164 VIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEE--LRDRKMKKFKGDNPRPRLALNCV 241 (354)
T ss_pred eeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHH--hcchhhhhhhccCCCceEEEecc
Confidence 9999999999999999999999977777766555544432 699999985432 1111122222 34799999999
Q ss_pred chhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccc------hHHHHHHHHHHHHH
Q 042784 243 GGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMD------RFADFTVEMESYIK 316 (356)
Q Consensus 243 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~~~~~ 316 (356)
|+....+..+.|..+|+++++|-.+.. ....+...++.|+++++|+++..|.. .+.+.++++++|+.
T Consensus 242 GGksa~~iar~L~~GgtmvTYGGMSkq-------Pv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~ 314 (354)
T KOG0025|consen 242 GGKSATEIARYLERGGTMVTYGGMSKQ-------PVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYR 314 (354)
T ss_pred CchhHHHHHHHHhcCceEEEecCccCC-------CcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHH
Confidence 999888999999999999999976541 23346677899999999999988753 34477899999999
Q ss_pred cCCeeeeeeEEeChhhHHHHHHHHHcC-CCcceEEEEe
Q 042784 317 EGKIRSKHVIYYGVESFLESLGSLFSS-SNIGKVVIQV 353 (356)
Q Consensus 317 ~g~i~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvi~~ 353 (356)
.|+|..+.....+|++...|++..... ...||-++.+
T Consensus 315 ~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 315 RGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred cCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 999999988889999998888864433 3335666554
No 35
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=6.3e-39 Score=298.45 Aligned_cols=315 Identities=15% Similarity=0.118 Sum_probs=234.8
Q ss_pred eeeeEEEecccCCCCCCCCCeEEEEeeccccCCC-----CCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCcee
Q 042784 12 ESKEWYISAYASDGVPTSDHLKLRSASVSLAIDS-----IPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVI 86 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~-----~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~ 86 (356)
.||++++.+. ++++++++++|. |. |.++||||||.++|||++|++.+.|... ...|+.+| +
T Consensus 2 ~mka~v~~~~--------~~~~~~e~~~P~--~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~--~~~p~i~G--h 67 (393)
T TIGR02819 2 GNRGVVYLGP--------GKVEVQDIDYPK--LELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT--APTGLVLG--H 67 (393)
T ss_pred CceEEEEecC--------CceeEEeccCCc--ccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC--CCCCcccc--c
Confidence 4778777643 568898887632 22 2379999999999999999999886421 12344454 5
Q ss_pred eeeEEEEEeccCCCCCCCCCEEEec---------------------------------------cCCeeeEEeecCC--c
Q 042784 87 LAFGIARVIRSKDSKYSDGDIVLRA---------------------------------------FLPVAEYSLLPCD--L 125 (356)
Q Consensus 87 ~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------~g~~a~~~~v~~~--~ 125 (356)
|++|+|+++|++|+++++||||++. .|+|+||+++++. .
T Consensus 68 E~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~ 147 (393)
T TIGR02819 68 EITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFN 147 (393)
T ss_pred eeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCc
Confidence 9999999999999999999999641 3789999999974 4
Q ss_pred ccccCCCCCCCCc----cccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCChH
Q 042784 126 LTRKLDPASGIPF----PDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCK-VVGSTGSDD 200 (356)
Q Consensus 126 ~~~~i~~P~~~s~----~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~-V~~~~~s~~ 200 (356)
+++ + |++++. ++ ++++.+++.+||+++. .+++++|++|+|.|+ |++|++++|+|+.+|++ |++++.+++
T Consensus 148 l~~-v--P~~~~~~~~~~~-~a~l~~~~~ta~~a~~-~~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d~~~~ 221 (393)
T TIGR02819 148 LLK-F--PDRDQALEKIRD-LTMLSDIFPTGYHGAV-TAGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGDLNPA 221 (393)
T ss_pred eEE-C--CCcccccccccc-eeeeccHHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHH
Confidence 534 4 776643 34 5788889999999986 578999999999765 99999999999999996 555567788
Q ss_pred HHHHHHHHhCCCceeecCChhhHHHHHHHHCC-CCceEEEECCchh---------------hHHHHHHhcccCCEEEEEe
Q 042784 201 NVKLLKEEFGYDDAFNYNSEMSFDAALTKYFP-NGIDVYLDNVGGK---------------MLEAVLNHVNVHARIILCG 264 (356)
Q Consensus 201 ~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~-~~~d~vld~~g~~---------------~~~~~~~~l~~~G~~v~~g 264 (356)
++++++ ++|++ .+++....++.+.+.++++ .++|++|||+|.+ .+.+++++++++|+++.+|
T Consensus 222 r~~~a~-~~Ga~-~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G 299 (393)
T TIGR02819 222 RLAQAR-SFGCE-TVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPG 299 (393)
T ss_pred HHHHHH-HcCCe-EEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEee
Confidence 999999 89997 4665432467777888774 4899999999974 7999999999999999999
Q ss_pred cccccccccc-----cccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeee--eee-EEeChhhHHHH
Q 042784 265 MISQYNKVWT-----ERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRS--KHV-IYYGVESFLES 336 (356)
Q Consensus 265 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~-~~~~~~~~~~a 336 (356)
.......... .............+++++.+... ...++..++++++.+|++.+ .++ ++|+|+|+++|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~-----~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a 374 (393)
T TIGR02819 300 LYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQT-----PVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEG 374 (393)
T ss_pred ecCCcccccccccccccccccchHHhhccCceEEeccC-----ChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHH
Confidence 8632110000 00011123334456666665211 11234567899999999875 455 68999999999
Q ss_pred HHHHHcCCCcceEEEEec
Q 042784 337 LGSLFSSSNIGKVVIQVK 354 (356)
Q Consensus 337 ~~~~~~~~~~gkvvi~~~ 354 (356)
|+.+.+++ .+|+++++.
T Consensus 375 ~~~~~~~~-~~Kvvi~~~ 391 (393)
T TIGR02819 375 YAEFDAGA-AKKFVIDPH 391 (393)
T ss_pred HHHHhhCC-ceEEEEeCC
Confidence 99998775 489999763
No 36
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=5.9e-39 Score=301.41 Aligned_cols=314 Identities=18% Similarity=0.131 Sum_probs=238.5
Q ss_pred eeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhh-cCCCCCCc---cCCCccCceee
Q 042784 12 ESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATM-TGTNDGLY---FPQFNLNQVIL 87 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~-~g~~~~~~---~~~~~~g~~~~ 87 (356)
.|+++.+.. ++.+++++++. |+++++||+|||.++|+|++|++.+ .|...... ..++|...|+|
T Consensus 2 ~~~a~~~~~--------~~~l~~~e~p~----P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE 69 (410)
T cd08238 2 KTKAWRMYG--------KGDLRLEKFEL----PEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHE 69 (410)
T ss_pred CcEEEEEEc--------CCceEEEecCC----CCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccc
Confidence 367777763 24688888755 7789999999999999999999976 34211110 01234445569
Q ss_pred eeEEEEEeccCCC-CCCCCCEEEec------------------cCCeeeEEeecCC----cccccCCCCCCCCccccccc
Q 042784 88 AFGIARVIRSKDS-KYSDGDIVLRA------------------FLPVAEYSLLPCD----LLTRKLDPASGIPFPDYLSS 144 (356)
Q Consensus 88 ~~G~v~~vg~~v~-~~~~Gd~V~~~------------------~g~~a~~~~v~~~----~~~~~i~~P~~~s~~~~aa~ 144 (356)
++|+|+++|++++ +|++||||++. .|+|+||++++.+ .+++ + |+++++++ ++
T Consensus 70 ~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~-l--P~~l~~~~-aa- 144 (410)
T cd08238 70 FAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLL-I--YEGDGYAE-AS- 144 (410)
T ss_pred cEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEE-C--CCCCCHHH-Hh-
Confidence 9999999999998 69999999842 3899999999987 3434 3 99999988 44
Q ss_pred cCchh---hhHHHHH--------HHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC---EEEEEeCChHHHHHHHHHh-
Q 042784 145 LGIPG---FAAWVGI--------EVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC---KVVGSTGSDDNVKLLKEEF- 209 (356)
Q Consensus 145 l~~~~---~ta~~~l--------~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~---~V~~~~~s~~~~~~~~~~~- 209 (356)
+..++ .+++.++ ...+++++|++|+|+|++|++|++++|+|+.+|+ +|++++.++++++.++ ++
T Consensus 145 l~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~-~~~ 223 (410)
T cd08238 145 LVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ-RLF 223 (410)
T ss_pred hcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH-Hhc
Confidence 33222 2233332 2356789999999999889999999999999854 8999999999999998 66
Q ss_pred -------CCC-ceeecCChhhHHHHHHHHCC-CCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccch
Q 042784 210 -------GYD-DAFNYNSEMSFDAALTKYFP-NGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGV 279 (356)
Q Consensus 210 -------g~~-~v~~~~~~~~~~~~i~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 279 (356)
|++ .++++++..++.+.++++++ .++|++||++|. ..+..++++++++|+++.++...... ....
T Consensus 224 ~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~-----~~~~ 298 (410)
T cd08238 224 PPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKN-----FSAP 298 (410)
T ss_pred cccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCC-----cccc
Confidence 665 46776532467788888875 489999999985 68899999999999887764422100 0112
Q ss_pred hhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCCCcceEEEEec
Q 042784 280 RNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSSNIGKVVIQVK 354 (356)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 354 (356)
.+...++.+++++.++...+ .+.++++++++.+|++++ .++++|+|+++++||+.+. ++..||+|+.+.
T Consensus 299 ~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~ 369 (410)
T cd08238 299 LNFYNVHYNNTHYVGTSGGN-----TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ 369 (410)
T ss_pred ccHHHhhhcCcEEEEeCCCC-----HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence 34556778899998875432 245788999999999987 6888999999999999998 778899999874
No 37
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=3.1e-39 Score=298.37 Aligned_cols=306 Identities=17% Similarity=0.119 Sum_probs=229.9
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||++++.. +.++ ++++++++ |+|+++||||||.++++|++|++.+.|.........+|...|+|++|+|
T Consensus 1 mka~~~~~------~~~~-l~~~~~p~----p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V 69 (355)
T cd08230 1 MKAIAVKP------GKPG-VRVVDIPE----PEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVV 69 (355)
T ss_pred CceeEecC------CCCC-CeEEeCCC----CCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEE
Confidence 46777762 2223 88888755 7889999999999999999999999875322111123344455999999
Q ss_pred EEeccCCCCCCCCCEEEec--------------------------------cCCeeeEEeecCCcccccCCCCCCCCccc
Q 042784 93 RVIRSKDSKYSDGDIVLRA--------------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPD 140 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~--------------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~ 140 (356)
+++|++ +.|++||||+.. .|+|+||++++++.++.+ |++++ +.
T Consensus 70 ~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~---P~~~~-~~ 144 (355)
T cd08230 70 EEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKV---PPSLA-DV 144 (355)
T ss_pred EEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEEC---CCCCC-cc
Confidence 999999 999999999831 278999999999988555 99999 43
Q ss_pred cccccCchhhhHHHHHHHh------CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC---ChHHHHHHHHHhCC
Q 042784 141 YLSSLGIPGFAAWVGIEVL------GQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTG---SDDNVKLLKEEFGY 211 (356)
Q Consensus 141 ~aa~l~~~~~ta~~~l~~~------~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~---s~~~~~~~~~~~g~ 211 (356)
+++..++.++++++... .+.++|++|+|+|+ |++|++++|+||..|++|+++++ +++++++++ ++|+
T Consensus 145 --a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~-~~Ga 220 (355)
T cd08230 145 --GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE-ELGA 220 (355)
T ss_pred --eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCC
Confidence 66777777766655322 23578999999996 99999999999999999999987 688999998 8999
Q ss_pred CceeecCChhhHHHHHHHHCCCCceEEEECCchh-hHHHHHHhcccCCEEEEEecccccccccccccch-hhhhhhhccc
Q 042784 212 DDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGK-MLEAVLNHVNVHARIILCGMISQYNKVWTERDGV-RNLLNMIGKE 289 (356)
Q Consensus 212 ~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~ 289 (356)
+. +++.+ .++.+ .. ..+++|+||||+|.. .+..++++++++|+++.+|...+.. ..+... .....++.++
T Consensus 221 ~~-v~~~~-~~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~---~~~~~~~~~~~~~~~k~ 292 (355)
T cd08230 221 TY-VNSSK-TPVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGR---EFEVDGGELNRDLVLGN 292 (355)
T ss_pred EE-ecCCc-cchhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCC---ccccChhhhhhhHhhcC
Confidence 85 56654 34433 21 235799999999975 7899999999999999999865411 001110 0134567789
Q ss_pred eEEEEEecccccchHHHHHHHHHHHHHcCC------eeeeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 290 VKMEGFMIGSHMDRFADFTVEMESYIKEGK------IRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~------i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
+++.++...+. +.++++++++.++. +++.++++|+++|+++||+.+.++. +|+|+++
T Consensus 293 ~~i~g~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 293 KALVGSVNANK-----RHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred cEEEEecCCch-----hhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 99988754432 34567777777665 6677889999999999999887554 5999875
No 38
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=3.2e-39 Score=291.56 Aligned_cols=315 Identities=22% Similarity=0.269 Sum_probs=237.5
Q ss_pred CCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCc-cCCCccCceeeeeEE---EEEec-cCCCC
Q 042784 27 PTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLY-FPQFNLNQVILAFGI---ARVIR-SKDSK 101 (356)
Q Consensus 27 ~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~~~~~~G~---v~~vg-~~v~~ 101 (356)
++......++.++ |.|.+++++|++.++++||.|+.++.|...... ...+|...+.++.|+ +...| ..+..
T Consensus 15 ~~~~~~~~~~~~i----P~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~ 90 (347)
T KOG1198|consen 15 GGGEVLFSEEVPI----PEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGG 90 (347)
T ss_pred CCcceEEeecccC----CCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccc
Confidence 3334445555544 899999999999999999999999997543332 012332223344444 44445 34455
Q ss_pred CCCCCEEEe--ccCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhC------CCCCCCEEEEEcC
Q 042784 102 YSDGDIVLR--AFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLG------QPKSGSNVFVSAA 173 (356)
Q Consensus 102 ~~~Gd~V~~--~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~------~~~~g~~VlV~g~ 173 (356)
+..||++.. ..|+|+||+++|...+++. |+++++++ +|+++.++.|||.++.+.+ ++++|++|||+||
T Consensus 91 ~~~g~~~~~~~~~g~~aey~v~p~~~~~~~---P~~l~~~~-aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~gg 166 (347)
T KOG1198|consen 91 WVHGDAVVAFLSSGGLAEYVVVPEKLLVKI---PESLSFEE-AAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGG 166 (347)
T ss_pred eEeeeEEeeccCCCceeeEEEcchhhccCC---CCccChhh-hhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeC
Confidence 778887772 3499999999998777555 99999999 8999999999999999989 8999999999999
Q ss_pred CChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchhhHHHHHHh
Q 042784 174 AGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNH 253 (356)
Q Consensus 174 ~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~ 253 (356)
+|++|++++|+|++.|+..+++++++++.++++ ++|+++++||++ .++.+.+.+.++++||+||||+|+.....+..+
T Consensus 167 sggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k-~lGAd~vvdy~~-~~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~ 244 (347)
T KOG1198|consen 167 SGGVGTAAIQLAKHAGAIKVVTACSKEKLELVK-KLGADEVVDYKD-ENVVELIKKYTGKGVDVVLDCVGGSTLTKSLSC 244 (347)
T ss_pred CcHHHHHHHHHHHhcCCcEEEEEcccchHHHHH-HcCCcEeecCCC-HHHHHHHHhhcCCCccEEEECCCCCccccchhh
Confidence 999999999999999964444555999999999 999999999999 899999999887799999999999888888889
Q ss_pred cccCCEEEEEecccccccccccccchhhhhhhhcc---ceEEEEEeccc-ccchHHHHHHHHHHHHHcCCeeeeeeEEeC
Q 042784 254 VNVHARIILCGMISQYNKVWTERDGVRNLLNMIGK---EVKMEGFMIGS-HMDRFADFTVEMESYIKEGKIRSKHVIYYG 329 (356)
Q Consensus 254 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~g~i~~~~~~~~~ 329 (356)
+...|....++............ . .+.....+ ...+.+..... .....++.++.+.++++.+++++.+.+.||
T Consensus 245 l~~~g~~~~i~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p 321 (347)
T KOG1198|consen 245 LLKGGGGAYIGLVGDELANYKLD--D-LWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYP 321 (347)
T ss_pred hccCCceEEEEeccccccccccc--c-chhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeee
Confidence 88888655554433211000000 0 00011111 11111111111 112345889999999999999999999999
Q ss_pred hhhHHHHHHHHHcCCCcceEEEEec
Q 042784 330 VESFLESLGSLFSSSNIGKVVIQVK 354 (356)
Q Consensus 330 ~~~~~~a~~~~~~~~~~gkvvi~~~ 354 (356)
++++.+|++.+.++...||+++++.
T Consensus 322 ~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 322 FSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred HHHHHHHHHHHhhcCCcceEEEEec
Confidence 9999999999999999999999875
No 39
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=8.6e-39 Score=289.30 Aligned_cols=291 Identities=12% Similarity=0.110 Sum_probs=222.9
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeC-hhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISID-PYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~-~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
+|++++.. ++.+++++.+. |+|+++||||||.+++|| .+|++.+.|.........+|...|+|++|+
T Consensus 2 ~ka~~~~~--------~~~l~~~e~~~----p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~ 69 (308)
T TIGR01202 2 TQAIVLSG--------PNQIELREVTL----TPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGR 69 (308)
T ss_pred ceEEEEeC--------CCeEEEEEecC----CCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEE
Confidence 56777763 36788888765 788999999999999996 589988877532211112344445599999
Q ss_pred EEEeccCCCCCCCCCEEEec-----------cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhC
Q 042784 92 ARVIRSKDSKYSDGDIVLRA-----------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLG 160 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~-----------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~ 160 (356)
|+++|+++ .|++||||++. .|+|+||++++++.++++ |++++.+. +.+ ..+.|||+++.+ .
T Consensus 70 V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~i---p~~~~~~~--a~~-~~~~~a~~~~~~-~ 141 (308)
T TIGR01202 70 VVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRL---DPALGPQG--ALL-ALAATARHAVAG-A 141 (308)
T ss_pred EEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeC---CCCCCHHH--Hhh-hHHHHHHHHHHh-c
Confidence 99999998 59999999941 599999999999888554 88898753 444 457899999964 3
Q ss_pred CCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEE
Q 042784 161 QPKSGSNVFVSAAAGGVGMFAGQLAKLKGCK-VVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYL 239 (356)
Q Consensus 161 ~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~-V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vl 239 (356)
..++++|+|+|+ |++|++++|+||.+|++ |++++..+++++.+. .+ .++|+.+ . .++++|+||
T Consensus 142 -~~~~~~vlV~G~-G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~-~~---~~i~~~~--~--------~~~g~Dvvi 205 (308)
T TIGR01202 142 -EVKVLPDLIVGH-GTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT-GY---EVLDPEK--D--------PRRDYRAIY 205 (308)
T ss_pred -ccCCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh-hc---cccChhh--c--------cCCCCCEEE
Confidence 346899999985 99999999999999995 666666667766655 32 3455432 1 235799999
Q ss_pred ECCchh-hHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcC
Q 042784 240 DNVGGK-MLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEG 318 (356)
Q Consensus 240 d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g 318 (356)
||+|.. .++.++++++++|+++.+|..... ...++..++.|++++.++.... .+.++++++++.+|
T Consensus 206 d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~--------~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~l~~~g 272 (308)
T TIGR01202 206 DASGDPSLIDTLVRRLAKGGEIVLAGFYTEP--------VNFDFVPAFMKEARLRIAAEWQ-----PGDLHAVRELIESG 272 (308)
T ss_pred ECCCCHHHHHHHHHhhhcCcEEEEEeecCCC--------cccccchhhhcceEEEEecccc-----hhHHHHHHHHHHcC
Confidence 999985 689999999999999999975431 1123445667888887654322 35688999999999
Q ss_pred Ceee--eeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 319 KIRS--KHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 319 ~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
++.+ .++++|+|+|+++||+.+.++...+|++++
T Consensus 273 ~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 273 ALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred CCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 9875 588899999999999998877777899874
No 40
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=1.2e-38 Score=292.41 Aligned_cols=287 Identities=14% Similarity=0.106 Sum_probs=220.6
Q ss_pred CCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCc-cCCCccCceeeeeEEEEEeccCCCCCCCCCE
Q 042784 29 SDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLY-FPQFNLNQVILAFGIARVIRSKDSKYSDGDI 107 (356)
Q Consensus 29 ~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~ 107 (356)
|+.+++++.+. |. +++||||||.++|||++|++.++|...... ..++|...|+|++|+|+++|.+ .|++|||
T Consensus 11 ~~~~~~~~~~~----P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~vGdr 83 (341)
T cd08237 11 PKFFEVTYEEE----NL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYKVGTK 83 (341)
T ss_pred cceEEEeecCC----CC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccCCCCE
Confidence 46899988865 54 899999999999999999999987532211 1234445556999999998765 7999999
Q ss_pred EEec--------------------------cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHh--
Q 042784 108 VLRA--------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVL-- 159 (356)
Q Consensus 108 V~~~--------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~-- 159 (356)
|++. .|+|+||+++++++++++ |+++++++ |++..++.++++++...
T Consensus 84 V~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v---P~~l~~~~--aa~~~~~~~a~~a~~~~~~ 158 (341)
T cd08237 84 VVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKL---PDNVDPEV--AAFTELVSVGVHAISRFEQ 158 (341)
T ss_pred EEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEEC---CCCCChHH--hhhhchHHHHHHHHHHHhh
Confidence 9841 288999999999988555 99999987 45777899999998643
Q ss_pred CCCCCCCEEEEEcCCChHHHHHHHHHHH-CCC-EEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceE
Q 042784 160 GQPKSGSNVFVSAAAGGVGMFAGQLAKL-KGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDV 237 (356)
Q Consensus 160 ~~~~~g~~VlV~g~~g~vG~~~i~la~~-~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~ 237 (356)
..+++|++|+|+|+ |++|++++|+++. .|. +|++++++++|+++++ ++++...+ .++.+ ..++|+
T Consensus 159 ~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~-~~~~~~~~-----~~~~~------~~g~d~ 225 (341)
T cd08237 159 IAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFS-FADETYLI-----DDIPE------DLAVDH 225 (341)
T ss_pred cCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHh-hcCceeeh-----hhhhh------ccCCcE
Confidence 34688999999996 9999999999986 665 8999999999999998 66654222 11211 126999
Q ss_pred EEECCch----hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHH
Q 042784 238 YLDNVGG----KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMES 313 (356)
Q Consensus 238 vld~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 313 (356)
||||+|+ ..+..++++++++|+++.+|..... ...+...++.+++++.++...+ .+.++++++
T Consensus 226 viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~--------~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~ 292 (341)
T cd08237 226 AFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYP--------VPINTRMVLEKGLTLVGSSRST-----REDFERAVE 292 (341)
T ss_pred EEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCC--------cccCHHHHhhCceEEEEecccC-----HHHHHHHHH
Confidence 9999994 3789999999999999999975321 1234455678999998875432 245788999
Q ss_pred HHHcC-----CeeeeeeEEeChh---hHHHHHHHHHcCCCcceEEEEec
Q 042784 314 YIKEG-----KIRSKHVIYYGVE---SFLESLGSLFSSSNIGKVVIQVK 354 (356)
Q Consensus 314 ~~~~g-----~i~~~~~~~~~~~---~~~~a~~~~~~~~~~gkvvi~~~ 354 (356)
++.++ .+++.++++|+++ ++.++++.+.++ ..||+||+++
T Consensus 293 ~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 293 LLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred HHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 99988 5778888899974 666666666554 6799999875
No 41
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=4.6e-38 Score=288.13 Aligned_cols=302 Identities=18% Similarity=0.194 Sum_probs=250.1
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||++++.+.. +.+++++++. |++.++||+||+.++++|+.|...+.|.... .+++...++|++|+|
T Consensus 1 m~a~~~~~~~-------~~~~~~~~~~----p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v 66 (333)
T cd08296 1 YKAVQVTEPG-------GPLELVERDV----PLPGPGEVLIKVEACGVCHSDAFVKEGAMPG---LSYPRVPGHEVVGRI 66 (333)
T ss_pred CeEEEEccCC-------CCceEEeccC----CCCCCCEEEEEEEEEecchHHHHHHhCCCCC---CCCCcccCcceeEEE
Confidence 5788887542 4688888755 7789999999999999999999988774322 122334445999999
Q ss_pred EEeccCCCCCCCCCEEEec------------------------------cCCeeeEEeecCCcccccCCCCCCCCccccc
Q 042784 93 RVIRSKDSKYSDGDIVLRA------------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYL 142 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~------------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~a 142 (356)
+++|++++++++||+|+.. .|++++|+.++.+.++.. |+++++++ +
T Consensus 67 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~l---p~~~~~~~-a 142 (333)
T cd08296 67 DAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARI---PDDLDAAE-A 142 (333)
T ss_pred EEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeC---CCCCCHHH-h
Confidence 9999999999999999831 488999999999877544 99999988 7
Q ss_pred cccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhh
Q 042784 143 SSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMS 222 (356)
Q Consensus 143 a~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~ 222 (356)
+.++++++|||+++.. .++.++++|+|+| +|++|++++++|+.+|++|+++++++++.+.++ ++|+++++++.+ .+
T Consensus 143 a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~-~~ 218 (333)
T cd08296 143 APLLCAGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR-KLGAHHYIDTSK-ED 218 (333)
T ss_pred hhhhhhhHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HcCCcEEecCCC-cc
Confidence 8899999999999965 4899999999999 699999999999999999999999999999997 899998998876 56
Q ss_pred HHHHHHHHCCCCceEEEECCc-hhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccccc
Q 042784 223 FDAALTKYFPNGIDVYLDNVG-GKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM 301 (356)
Q Consensus 223 ~~~~i~~~~~~~~d~vld~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (356)
+.+.+++. +++|+++|++| ...+..++++++++|+++.+|.... ....+...++.+++++.+.....
T Consensus 219 ~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--------~~~~~~~~~~~~~~~i~~~~~~~-- 286 (333)
T cd08296 219 VAEALQEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE--------PVAVSPLQLIMGRKSIHGWPSGT-- 286 (333)
T ss_pred HHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC--------CCCcCHHHHhhcccEEEEeCcCC--
Confidence 77777665 46999999986 5688999999999999999987542 12234456678999999876432
Q ss_pred chHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 302 DRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 302 ~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
...++.+++++.++.+++.+ ..|+++++.+||+.+.+++..||+|++
T Consensus 287 ---~~~~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 287 ---ALDSEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred ---HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 24577888899999998775 489999999999999999999999874
No 42
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=2.9e-38 Score=289.14 Aligned_cols=295 Identities=21% Similarity=0.179 Sum_probs=234.4
Q ss_pred EEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCC-ccCceeeeeEEEEEeccCCCCCCCCCEEEec-
Q 042784 34 LRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQF-NLNQVILAFGIARVIRSKDSKYSDGDIVLRA- 111 (356)
Q Consensus 34 ~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~-~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~~~- 111 (356)
+++.+. |.+.++||+|||.++|||.+|+|.++|..... ..+. .+|| |++|+|+++| .++.+++||||++.
T Consensus 15 ~~~~~~----p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~-~~~~~i~GH--E~~G~V~evG-~~~~~~~GdrVvv~~ 86 (350)
T COG1063 15 LEEPPP----PIPGPGDVLIRVTATGICGSDLHIYRGGEPFV-PPGDIILGH--EFVGEVVEVG-VVRGFKVGDRVVVEP 86 (350)
T ss_pred cccCCC----CCCCCCeEEEEEEEEeEchhhhhhccCCCCCC-CCCCcccCc--cceEEEEEec-cccCCCCCCEEEECC
Confidence 555533 46889999999999999999999999743222 2222 5555 8999999999 77889999999951
Q ss_pred ---------------------------------cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHH
Q 042784 112 ---------------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEV 158 (356)
Q Consensus 112 ---------------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~ 158 (356)
.|+|+||+.+|.+.++.++ |++++.+ +++|..++.+++++...
T Consensus 87 ~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~--pd~~~~~--~aal~epla~~~~~~a~ 162 (350)
T COG1063 87 NIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKL--PDGIDEE--AAALTEPLATAYHGHAE 162 (350)
T ss_pred CcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecC--CCCCChh--hhhhcChhhhhhhhhhh
Confidence 1789999999987776765 7777554 58999999999877444
Q ss_pred hCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCC-Cce
Q 042784 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPN-GID 236 (356)
Q Consensus 159 ~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d 236 (356)
.....++++|+|.|+ |++|++++++++..|+ +|++++.+++|++++++.+|++.+++... .+....+.+++++ ++|
T Consensus 163 ~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~-~~~~~~~~~~t~g~g~D 240 (350)
T COG1063 163 RAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE-DDAGAEILELTGGRGAD 240 (350)
T ss_pred ccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc-ccHHHHHHHHhCCCCCC
Confidence 555566669999997 9999999999999998 99999999999999993366665555443 3667777788755 999
Q ss_pred EEEECCchh-hHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHH
Q 042784 237 VYLDNVGGK-MLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYI 315 (356)
Q Consensus 237 ~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (356)
++|||+|.. .+.+++++++++|+++.+|...... ...+...++.|++++.++.... ....++.+++++
T Consensus 241 ~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~-------~~~~~~~~~~kel~l~gs~~~~----~~~~~~~~~~ll 309 (350)
T COG1063 241 VVIEAVGSPPALDQALEALRPGGTVVVVGVYGGED-------IPLPAGLVVSKELTLRGSLRPS----GREDFERALDLL 309 (350)
T ss_pred EEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCcc-------CccCHHHHHhcccEEEeccCCC----CcccHHHHHHHH
Confidence 999999975 7899999999999999999987621 0345667889999999983311 124578899999
Q ss_pred HcCCeee--eeeEEeChhhHHHHHHHHHcCCC-cceEEEEe
Q 042784 316 KEGKIRS--KHVIYYGVESFLESLGSLFSSSN-IGKVVIQV 353 (356)
Q Consensus 316 ~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~-~gkvvi~~ 353 (356)
.+|++.+ .+++.++++++++||+.+.+++. ..|+++.+
T Consensus 310 ~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 310 ASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred HcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 9999876 46778999999999999987554 55888863
No 43
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=5.1e-38 Score=291.06 Aligned_cols=307 Identities=18% Similarity=0.190 Sum_probs=243.0
Q ss_pred eeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEE
Q 042784 14 KEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIAR 93 (356)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~ 93 (356)
|++++.+++ +.+++++.+. |.|+++||+|||.++++|++|+....|.... ...|..+ |+|++|+|+
T Consensus 2 ka~~~~~~~-------~~l~~~~~~~----p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~--G~e~~G~V~ 67 (361)
T cd08231 2 RAAVLTGPG-------KPLEIREVPL----PDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIIL--GHEGVGRVV 67 (361)
T ss_pred eEEEEcCCC-------CCCEEEeccC----CCCCCCeEEEEEEEEeecCccHHHhcCCCCC-CCCCccc--ccCCceEEE
Confidence 567777553 5789998865 7789999999999999999999988875321 1233344 459999999
Q ss_pred EeccCCCC------CCCCCEEEec------------------------------------cCCeeeEEeecCC-cccccC
Q 042784 94 VIRSKDSK------YSDGDIVLRA------------------------------------FLPVAEYSLLPCD-LLTRKL 130 (356)
Q Consensus 94 ~vg~~v~~------~~~Gd~V~~~------------------------------------~g~~a~~~~v~~~-~~~~~i 130 (356)
++|++++. +++||+|+.. .|+|++|+.++++ .++. +
T Consensus 68 ~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~-l 146 (361)
T cd08231 68 ALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVR-V 146 (361)
T ss_pred EeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEE-C
Confidence 99999986 9999999832 3899999999986 5644 4
Q ss_pred CCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHh
Q 042784 131 DPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEF 209 (356)
Q Consensus 131 ~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~ 209 (356)
|++++.+. ++++++++.|||+++......++|++|||+| +|++|++++++|+.+|+ +|+++++++++.++++ ++
T Consensus 147 --P~~~~~~~-aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~ 221 (361)
T cd08231 147 --PDNVPDEV-AAPANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAR-EF 221 (361)
T ss_pred --CCCCCHHH-HHHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc
Confidence 88899887 6788899999999998777777999999998 49999999999999999 9999999999999998 89
Q ss_pred CCCceeecCCh--hhHHHHHHHHCC-CCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhh
Q 042784 210 GYDDAFNYNSE--MSFDAALTKYFP-NGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNM 285 (356)
Q Consensus 210 g~~~v~~~~~~--~~~~~~i~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 285 (356)
|++.++++++. .++...+.+.++ +++|++|||+|+ ..+..++++++++|+++.+|...... ........+
T Consensus 222 g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~ 295 (361)
T cd08231 222 GADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAG------TVPLDPERI 295 (361)
T ss_pred CCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCC------ccccCHHHH
Confidence 99888887642 123356777774 589999999986 57889999999999999998754211 011223346
Q ss_pred hccceEEEEEecccccchHHHHHHHHHHHHHcC----CeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 286 IGKEVKMEGFMIGSHMDRFADFTVEMESYIKEG----KIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g----~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
+.+++++.++...+ ++.++++++++.++ .+.+.++++|+++++++||+.+.++. .+|+||.
T Consensus 296 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~~k~vi~ 360 (361)
T cd08231 296 VRKNLTIIGVHNYD-----PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGT-ALKVVID 360 (361)
T ss_pred hhcccEEEEcccCC-----chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCC-ceEEEeC
Confidence 77888888876543 23456677777766 34567788999999999999998876 4799985
No 44
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=3.2e-38 Score=290.26 Aligned_cols=318 Identities=20% Similarity=0.209 Sum_probs=256.7
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCC-CcEEEEEEEEEeChhhhhhhcCCCCCCcc----CCCccCceee
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPD-HHVAVETLWISIDPYLRATMTGTNDGLYF----PQFNLNQVIL 87 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~-~eVlVkv~~~~i~~~d~~~~~g~~~~~~~----~~~~~g~~~~ 87 (356)
||+|++.+.+ ..++.+.+++.+. |.+.+ ++|+||+.++++|+.|.....|....... .+..+| ++
T Consensus 1 ~~a~~~~~~~----~~~~~~~~~~~~~----p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g--~e 70 (341)
T cd08290 1 AKALVYTEHG----EPKEVLQLESYEI----PPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGG--NE 70 (341)
T ss_pred CceEEEccCC----CchhheEEeecCC----CCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCC--cc
Confidence 6788887653 1124688988865 55666 99999999999999999988764321111 223444 58
Q ss_pred eeEEEEEeccCCCCCCCCCEEEec---cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCC
Q 042784 88 AFGIARVIRSKDSKYSDGDIVLRA---FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKS 164 (356)
Q Consensus 88 ~~G~v~~vg~~v~~~~~Gd~V~~~---~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~ 164 (356)
++|+|+++|+++..+++||+|+.. .|+|++|+.++.+.++.+ |+++++++ ++++++.++|||+++...+++++
T Consensus 71 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~l---p~~~~~~~-aa~~~~~~~ta~~~l~~~~~~~~ 146 (341)
T cd08290 71 GVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKV---PNDVDPEQ-AATLSVNPCTAYRLLEDFVKLQP 146 (341)
T ss_pred eEEEEEEeCCCCCCCCCCCEEEecCCCCccchheEeccHHHeEeC---CCCCCHHH-HHHhhccHHHHHHHHHhhcccCC
Confidence 999999999999999999999932 289999999999887554 99999998 78999999999999987788999
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCh----HHHHHHHHHhCCCceeecCChh---hHHHHHHHHCCCCceE
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSD----DNVKLLKEEFGYDDAFNYNSEM---SFDAALTKYFPNGIDV 237 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~----~~~~~~~~~~g~~~v~~~~~~~---~~~~~i~~~~~~~~d~ 237 (356)
|++|||+|++|++|++++++|+..|++|++++.++ ++.+.++ ++|++++++++. . ++.+.++++.++++|+
T Consensus 147 g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~i~~~~~~~~d~ 224 (341)
T cd08290 147 GDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLK-ALGADHVLTEEE-LRSLLATELLKSAPGGRPKL 224 (341)
T ss_pred CCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHH-hcCCCEEEeCcc-cccccHHHHHHHHcCCCceE
Confidence 99999999999999999999999999999888765 6788887 899999998875 3 6777787776558999
Q ss_pred EEECCchhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccccc-----chHHHHHHHHH
Q 042784 238 YLDNVGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM-----DRFADFTVEME 312 (356)
Q Consensus 238 vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~ 312 (356)
+|||+|+..+..++++++++|+++.+|..... ....+....+.+++++.+.....+. ......+++++
T Consensus 225 vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (341)
T cd08290 225 ALNCVGGKSATELARLLSPGGTMVTYGGMSGQ-------PVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELA 297 (341)
T ss_pred EEECcCcHhHHHHHHHhCCCCEEEEEeccCCC-------CcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHH
Confidence 99999998888899999999999999864321 0112333457889999888765432 12335688899
Q ss_pred HHHHcCCeeeeeeEEe---ChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 313 SYIKEGKIRSKHVIYY---GVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 313 ~~~~~g~i~~~~~~~~---~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
+++.++.+.+.+..++ +++++.++++.+.+++..||+|+++
T Consensus 298 ~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 298 ELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 9999999988766677 9999999999999999899999863
No 45
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.2e-37 Score=291.65 Aligned_cols=317 Identities=15% Similarity=0.213 Sum_probs=253.0
Q ss_pred eeeeeeEEEecccCCCCCCC-CCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCC---------ccCC
Q 042784 10 TVESKEWYISAYASDGVPTS-DHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGL---------YFPQ 79 (356)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~---------~~~~ 79 (356)
+.+|+++++.... ++.+ +.+++++.++ |.++++||+||+.++++|.+|.+...|..... ..++
T Consensus 10 ~~~~~a~~~~~~~---~g~~~~~~~~~~~~~----p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~ 82 (393)
T cd08246 10 PEKMYAFAIRPER---YGDPAQAIQLEDVPV----PELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPY 82 (393)
T ss_pred chhhhheeeeccc---CCCcccceEEeecCC----CCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCc
Confidence 4568888876321 2223 4678888865 77899999999999999999998876541110 0111
Q ss_pred CccCceeeeeEEEEEeccCCCCCCCCCEEEec------------------------------cCCeeeEEeecCCccccc
Q 042784 80 FNLNQVILAFGIARVIRSKDSKYSDGDIVLRA------------------------------FLPVAEYSLLPCDLLTRK 129 (356)
Q Consensus 80 ~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------~g~~a~~~~v~~~~~~~~ 129 (356)
..+| +|++|+|+.+|++++.+++||+|+.. .|+|++|+.++...++.+
T Consensus 83 ~~~G--~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~i 160 (393)
T cd08246 83 HIGG--SDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPK 160 (393)
T ss_pred cccc--cceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEEC
Confidence 2445 48999999999999999999999832 289999999999887554
Q ss_pred CCCCCCCCccccccccCchhhhHHHHHHHh--CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 042784 130 LDPASGIPFPDYLSSLGIPGFAAWVGIEVL--GQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKE 207 (356)
Q Consensus 130 i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~ 207 (356)
|+++++++ ++.+++.+.|||+++... +++++|++|+|+|++|++|++++++|+.+|+++++++.++++.+.++
T Consensus 161 ---P~~l~~~~-aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~- 235 (393)
T cd08246 161 ---PKHLSWEE-AAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR- 235 (393)
T ss_pred ---CCCCCHHH-HhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-
Confidence 99999998 788999999999998755 67899999999999999999999999999999888998999999998
Q ss_pred HhCCCceeecCCh---------------------hhHHHHHHHHCCC--CceEEEECCchhhHHHHHHhcccCCEEEEEe
Q 042784 208 EFGYDDAFNYNSE---------------------MSFDAALTKYFPN--GIDVYLDNVGGKMLEAVLNHVNVHARIILCG 264 (356)
Q Consensus 208 ~~g~~~v~~~~~~---------------------~~~~~~i~~~~~~--~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g 264 (356)
++|+++++++++. ..+.+.+.+++++ ++|++|||+|...+..++++++++|+++.+|
T Consensus 236 ~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g 315 (393)
T cd08246 236 ALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICA 315 (393)
T ss_pred HcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEc
Confidence 7999988886431 1356677777754 7999999999988999999999999999998
Q ss_pred cccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcC-
Q 042784 265 MISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSS- 343 (356)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~- 343 (356)
...... ...+...++.++.++.+..... .+.+.+++++++++.+.+.++++|+++++++|++.+.++
T Consensus 316 ~~~~~~-------~~~~~~~l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~ 383 (393)
T cd08246 316 GTTGYN-------HTYDNRYLWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQ 383 (393)
T ss_pred ccCCCC-------CCCcHHHHhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCc
Confidence 754311 1123344556777777665443 245788999999999988788899999999999999988
Q ss_pred CCcceEEEE
Q 042784 344 SNIGKVVIQ 352 (356)
Q Consensus 344 ~~~gkvvi~ 352 (356)
+..||+|+-
T Consensus 384 ~~~gkvvv~ 392 (393)
T cd08246 384 HHVGNMAVL 392 (393)
T ss_pred cccceEEEe
Confidence 788999874
No 46
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.8e-37 Score=287.40 Aligned_cols=310 Identities=19% Similarity=0.220 Sum_probs=251.6
Q ss_pred eeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 12 ESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
+||++++..++ +.+++++.++ |.+.++||+|||.++++|+.|++...|.+. ...| ...++|++|+
T Consensus 2 ~~~a~~~~~~~-------~~~~~~~~~~----p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~--~~~p--~v~G~e~~G~ 66 (365)
T cd08278 2 KTTAAVVREPG-------GPFVLEDVEL----DDPRPDEVLVRIVATGICHTDLVVRDGGLP--TPLP--AVLGHEGAGV 66 (365)
T ss_pred ccEEeeeccCC-------CcceEEEeec----CCCCCCeEEEEEEEeecCcccHHHhcCCCC--CCCC--cccccceeEE
Confidence 57888888643 4578888766 778999999999999999999999886432 1223 3444599999
Q ss_pred EEEeccCCCCCCCCCEEEe---------------------------------------------------ccCCeeeEEe
Q 042784 92 ARVIRSKDSKYSDGDIVLR---------------------------------------------------AFLPVAEYSL 120 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~---------------------------------------------------~~g~~a~~~~ 120 (356)
|+++|+++..+++||+|++ +.|+|++|+.
T Consensus 67 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~ 146 (365)
T cd08278 67 VEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAV 146 (365)
T ss_pred EEEeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEE
Confidence 9999999999999999983 1378999999
Q ss_pred ecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCh
Q 042784 121 LPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSD 199 (356)
Q Consensus 121 v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~ 199 (356)
++++.++++ |+++++++ ++.++++++||+.++.+.+++++|++|+|+|+ |++|++++++|+..|+ +|++++.++
T Consensus 147 v~~~~~~~i---P~~~s~~~-a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~~~~ 221 (365)
T cd08278 147 VHERNVVKV---DKDVPLEL-LAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDIVD 221 (365)
T ss_pred ecchhEEEC---CCCCCHHH-hhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCH
Confidence 999888555 99999998 89999999999999988888999999999975 9999999999999999 699998899
Q ss_pred HHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccc
Q 042784 200 DNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDG 278 (356)
Q Consensus 200 ~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 278 (356)
++.+.++ ++|++.++++.. .++.+.+.+.+++++|+++||+|. ..+..++++++++|+++.+|...... ..
T Consensus 222 ~k~~~~~-~~g~~~~i~~~~-~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~ 293 (365)
T cd08278 222 SRLELAK-ELGATHVINPKE-EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGA------EV 293 (365)
T ss_pred HHHHHHH-HcCCcEEecCCC-cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCC------cc
Confidence 9999888 899998898876 567777877776689999999986 57899999999999999998753211 11
Q ss_pred hhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeee-eeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 279 VRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRS-KHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~-~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
..+...++.+++++.++..... ...+.+++++++++++.+.+ .+...|+++++++|++.+.+++. -|+|++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~ 365 (365)
T cd08278 294 TLDVNDLLVSGKTIRGVIEGDS--VPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKV-IKPVLR 365 (365)
T ss_pred ccCHHHHhhcCceEEEeecCCc--ChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCc-eEEEEC
Confidence 2344455578888887765432 12466788999999999854 34458999999999999987765 488774
No 47
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=4.4e-37 Score=280.63 Aligned_cols=318 Identities=19% Similarity=0.207 Sum_probs=256.8
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||++.+... +.++.+++.+.+. |.+.+++|+||+.++++|+.|++...|..........+...+++++|+|
T Consensus 1 ~~a~~~~~~-----~~~~~~~~~~~~~----~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v 71 (324)
T cd08244 1 MRAIRLHEF-----GPPEVLVPEDVPD----PVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVV 71 (324)
T ss_pred CeEEEEcCC-----CCccceEEeccCC----CCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEE
Confidence 467776543 3446777776644 5688999999999999999999988764322111222333345899999
Q ss_pred EEeccCCCCCCCCCEEEec----cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEE
Q 042784 93 RVIRSKDSKYSDGDIVLRA----FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNV 168 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~----~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~V 168 (356)
+++|++++.+++||+|+.. .|+|++|+.++.+.++++ |+++++++ ++++++.++||| ++...++++++++|
T Consensus 72 ~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~l---p~~~~~~~-a~~~~~~~~ta~-~~~~~~~~~~~~~v 146 (324)
T cd08244 72 DAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPV---PDGLDLEA-AVAVVHDGRTAL-GLLDLATLTPGDVV 146 (324)
T ss_pred EEeCCCCCCCCCCCEEEEccCCCCceeeEEEEEchHHeEeC---CCCCCHHH-HhhhcchHHHHH-HHHHhcCCCCCCEE
Confidence 9999999999999999932 589999999999888555 99999998 789999999995 45557889999999
Q ss_pred EEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCC-CCceEEEECCchhhH
Q 042784 169 FVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFP-NGIDVYLDNVGGKML 247 (356)
Q Consensus 169 lV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~-~~~d~vld~~g~~~~ 247 (356)
+|+|++|++|.+++++|+..|++|+++++++++.+.++ ++|++.++++++ .++.+.+.+.++ +++|+++||+|+...
T Consensus 147 lI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vl~~~g~~~~ 224 (324)
T cd08244 147 LVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-ALGADVAVDYTR-PDWPDQVREALGGGGVTVVLDGVGGAIG 224 (324)
T ss_pred EEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEecCC-ccHHHHHHHHcCCCCceEEEECCChHhH
Confidence 99999999999999999999999999999999999997 899988888876 567777877764 589999999999888
Q ss_pred HHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccccc-chHHHHHHHHHHHHHcCCeeeeeeE
Q 042784 248 EAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM-DRFADFTVEMESYIKEGKIRSKHVI 326 (356)
Q Consensus 248 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~g~i~~~~~~ 326 (356)
..++++++++|+++.+|...... . ..+....+.+++++.+....... ....+.++++++++.++.+.+.++.
T Consensus 225 ~~~~~~l~~~g~~v~~g~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 297 (324)
T cd08244 225 RAALALLAPGGRFLTYGWASGEW------T-ALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQ 297 (324)
T ss_pred HHHHHHhccCcEEEEEecCCCCC------C-ccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccce
Confidence 99999999999999998754311 1 12333456788888877654432 2345678889999999999877778
Q ss_pred EeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 327 YYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 327 ~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
.|+++++++|++.+.+++..||+|+++
T Consensus 298 ~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 298 TFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred EEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 999999999999999999999999864
No 48
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=2.6e-37 Score=289.61 Aligned_cols=320 Identities=18% Similarity=0.249 Sum_probs=254.9
Q ss_pred eeeeeeEEEec--ccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCC------Cc---cC
Q 042784 10 TVESKEWYISA--YASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDG------LY---FP 78 (356)
Q Consensus 10 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~------~~---~~ 78 (356)
+.+||+|.+++ ++ +.++.+++.+.+. |.++++||+||+.++++|.+|.+...+.... .+ ..
T Consensus 5 ~~~~~a~~~~~~~~~----~~~~~~~~~~~~~----p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~ 76 (398)
T TIGR01751 5 PETMYAFAIREERDG----DPRQAIQLEVVPV----PELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDL 76 (398)
T ss_pred chhhhheEEecccCC----CcccceEEeecCC----CCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCC
Confidence 35689999975 43 2336788888755 7789999999999999999988766543210 00 11
Q ss_pred C-CccCceeeeeEEEEEeccCCCCCCCCCEEEec------------------------------cCCeeeEEeecCCccc
Q 042784 79 Q-FNLNQVILAFGIARVIRSKDSKYSDGDIVLRA------------------------------FLPVAEYSLLPCDLLT 127 (356)
Q Consensus 79 ~-~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------~g~~a~~~~v~~~~~~ 127 (356)
+ ..+| +|++|+|+++|++++.+++||+|+.. .|+|+||+.++.+.++
T Consensus 77 ~~~v~G--~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~ 154 (398)
T TIGR01751 77 PFHIIG--SDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLM 154 (398)
T ss_pred Cceecc--cceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeE
Confidence 2 1344 58999999999999999999999831 3899999999998875
Q ss_pred ccCCCCCCCCccccccccCchhhhHHHHHHH--hCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 042784 128 RKLDPASGIPFPDYLSSLGIPGFAAWVGIEV--LGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLL 205 (356)
Q Consensus 128 ~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~ 205 (356)
.+ |+++++++ ++.+...+.|||+++.. .+++.+|++|+|+|++|++|++++++|+..|++++++++++++.+.+
T Consensus 155 ~v---P~~l~~~~-aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~ 230 (398)
T TIGR01751 155 PK---PKHLTWEE-AACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC 230 (398)
T ss_pred EC---CCCCCHHH-HhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence 55 99999998 78899999999999865 47789999999999999999999999999999988888899999999
Q ss_pred HHHhCCCceeecCCh---------------------hhHHHHHHHHCC-CCceEEEECCchhhHHHHHHhcccCCEEEEE
Q 042784 206 KEEFGYDDAFNYNSE---------------------MSFDAALTKYFP-NGIDVYLDNVGGKMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 206 ~~~~g~~~v~~~~~~---------------------~~~~~~i~~~~~-~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~ 263 (356)
+ ++|++.++|+... ..+.+.+.++++ +++|++|||+|...+..++++++++|+++.+
T Consensus 231 ~-~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~ 309 (398)
T TIGR01751 231 R-ELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVIC 309 (398)
T ss_pred H-HcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEE
Confidence 8 7999989887531 124566777774 5899999999988899999999999999999
Q ss_pred ecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcC
Q 042784 264 GMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSS 343 (356)
Q Consensus 264 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~ 343 (356)
|...... ...+...++.++.++.+...... ..++++++++.++.+.+.++.++++++++++++.+.++
T Consensus 310 g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~ 377 (398)
T TIGR01751 310 GGTTGYN-------HDYDNRYLWMRQKRIQGSHFANL-----REAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRN 377 (398)
T ss_pred ccccCCC-------CCcCHHHHhhcccEEEccccCcH-----HHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcC
Confidence 8764411 11123334455666665543322 33678899999999998888899999999999999999
Q ss_pred CCcceEEEEecCC
Q 042784 344 SNIGKVVIQVKAP 356 (356)
Q Consensus 344 ~~~gkvvi~~~~~ 356 (356)
+..||+|+++..|
T Consensus 378 ~~~gkvvv~~~~~ 390 (398)
T TIGR01751 378 HHQGNVAVLVLAP 390 (398)
T ss_pred CCCceEEEEeCCC
Confidence 9999999998653
No 49
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=2e-37 Score=284.90 Aligned_cols=307 Identities=20% Similarity=0.243 Sum_probs=250.5
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|++.+++ +.+++.+.+. |.+.+++|+||+.++++|++|+....|.+.......++...+++++|+|
T Consensus 1 ~ka~~~~~~~-------~~~~~~~~~~----~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V 69 (340)
T cd05284 1 MKAARLYEYG-------KPLRLEDVPV----PEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWV 69 (340)
T ss_pred CeeeEeccCC-------CCceEEeCCC----CCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEE
Confidence 4677777542 4577877754 7789999999999999999999988875532222333445556999999
Q ss_pred EEeccCCCCCCCCCEEEec-----------------------------cCCeeeEEeecCCcccccCCCCCCCCcccccc
Q 042784 93 RVIRSKDSKYSDGDIVLRA-----------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLS 143 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~-----------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa 143 (356)
.++|+++..+++||+|+.. .|+|++|+.++.+.++.+ |+++++++ ++
T Consensus 70 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~---P~~ls~~~-aa 145 (340)
T cd05284 70 EEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKL---PRGLDPVE-AA 145 (340)
T ss_pred EEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEEC---CCCCCHHH-hh
Confidence 9999999999999999821 378999999999888555 99999998 79
Q ss_pred ccCchhhhHHHHHHHh-CCCCCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHhCCCceeecCChh
Q 042784 144 SLGIPGFAAWVGIEVL-GQPKSGSNVFVSAAAGGVGMFAGQLAKLKG-CKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEM 221 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~-~~~~~g~~VlV~g~~g~vG~~~i~la~~~G-~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 221 (356)
+++..+.|||+++... .++.++++|||+|+ |++|++++++|+..| .+|+++++++++.+.++ ++|++++++++. .
T Consensus 146 ~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~ 222 (340)
T cd05284 146 PLADAGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAE-RLGADHVLNASD-D 222 (340)
T ss_pred hhcchHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH-HhCCcEEEcCCc-c
Confidence 9999999999999866 46889999999995 779999999999999 79999998999999997 899998998876 4
Q ss_pred hHHHHHHHHCC-CCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccc
Q 042784 222 SFDAALTKYFP-NGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGS 299 (356)
Q Consensus 222 ~~~~~i~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (356)
+.+.++++++ .++|+++||+|+ .....++++++++|+++.+|.... . ..+....+.+++++.+.....
T Consensus 223 -~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~--------~~~~~~~~~~~~~~~~~~~~~ 292 (340)
T cd05284 223 -VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-G--------RLPTSDLVPTEISVIGSLWGT 292 (340)
T ss_pred -HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-C--------ccCHHHhhhcceEEEEEeccc
Confidence 7788888774 489999999996 688999999999999999986532 0 112223356888888765432
Q ss_pred ccchHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 300 HMDRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 300 ~~~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
.+.+++++++++++.+++. ...|+++++++|++.+.+++..||+|+.+
T Consensus 293 -----~~~~~~~~~~l~~g~l~~~-~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 293 -----RAELVEVVALAESGKVKVE-ITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred -----HHHHHHHHHHHHhCCCCcc-eEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 3567889999999998864 45799999999999999999899999753
No 50
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=2.6e-37 Score=283.67 Aligned_cols=312 Identities=16% Similarity=0.172 Sum_probs=245.7
Q ss_pred eeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEE
Q 042784 14 KEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIAR 93 (356)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~ 93 (356)
|||.+.+.. ..+.++.+++.+.|. |.++++||+|||.++++|+.|...+.|... . .+++...+++++|+|+
T Consensus 1 ~~~~~~~~~--~~~~~~~~~~~~~~~----p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~-~--~~~~~~~g~e~~G~V~ 71 (336)
T TIGR02817 1 KAVGYKKPL--PITDPDALVDIDLPK----PKPGGRDLLVEVKAISVNPVDTKVRARMAP-E--AGQPKILGWDAAGVVV 71 (336)
T ss_pred Cceeecccc--CCCCcccceecccCC----CCCCCCEEEEEEEEEEcChHHHHHHcCCCC-C--CCCCcccceeeEEEEE
Confidence 456666531 114567788887754 789999999999999999999988876421 1 2233344559999999
Q ss_pred EeccCCCCCCCCCEEEec-----cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCC----
Q 042784 94 VIRSKDSKYSDGDIVLRA-----FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKS---- 164 (356)
Q Consensus 94 ~vg~~v~~~~~Gd~V~~~-----~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~---- 164 (356)
++|++++.+++||+|+.. .|+|++|+.++++.++.+ |+++++++ +|.++++++|||+++...+++++
T Consensus 72 ~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~i---p~~~~~~~-aa~~~~~~~ta~~~l~~~~~~~~~~~~ 147 (336)
T TIGR02817 72 AVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHK---PKSLSFAE-AAALPLTSITAWELLFDRLGINDPVAG 147 (336)
T ss_pred EeCCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHHcccC---CCCCCHHH-HhhhhHHHHHHHHHHHHhcCCCCCCCC
Confidence 999999999999999932 489999999999888555 99999998 78999999999999987888877
Q ss_pred -CCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECC
Q 042784 165 -GSNVFVSAAAGGVGMFAGQLAKLK-GCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNV 242 (356)
Q Consensus 165 -g~~VlV~g~~g~vG~~~i~la~~~-G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~ 242 (356)
|++|||+|++|++|++++|+||.+ |++|++++.++++.+.++ ++|+++++++. .++.+.+++..++++|+++|++
T Consensus 148 ~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~-~~g~~~~~~~~--~~~~~~i~~~~~~~vd~vl~~~ 224 (336)
T TIGR02817 148 DKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVL-ELGAHHVIDHS--KPLKAQLEKLGLEAVSYVFSLT 224 (336)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH-HcCCCEEEECC--CCHHHHHHHhcCCCCCEEEEcC
Confidence 999999999999999999999998 999999998999999998 89999999876 3677777776566899999998
Q ss_pred c-hhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecc--ccc---ch--HHHHHHHHHHH
Q 042784 243 G-GKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIG--SHM---DR--FADFTVEMESY 314 (356)
Q Consensus 243 g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~--~~~~l~~~~~~ 314 (356)
+ ......++++++++|+++.++.... .+...+..+++++...... ... .. ....+++++++
T Consensus 225 ~~~~~~~~~~~~l~~~G~~v~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 293 (336)
T TIGR02817 225 HTDQHFKEIVELLAPQGRFALIDDPAE-----------LDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARL 293 (336)
T ss_pred CcHHHHHHHHHHhccCCEEEEEccccc-----------ccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHH
Confidence 5 4688899999999999998743211 1222334454555543322 111 11 12567889999
Q ss_pred HHcCCeeeeeeEEeC---hhhHHHHHHHHHcCCCcceEEEE
Q 042784 315 IKEGKIRSKHVIYYG---VESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 315 ~~~g~i~~~~~~~~~---~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
+.++.+++.++..++ ++++++|++.+.+++..||+|++
T Consensus 294 ~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 294 VDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred HHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 999999887666554 79999999999999989999875
No 51
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=9.5e-37 Score=279.50 Aligned_cols=322 Identities=24% Similarity=0.312 Sum_probs=258.4
Q ss_pred eeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 12 ESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
+||++++...+ ....+.+++.+. |.+.++||+|||.++++|+.|.....|..... .+.+...+++++|+
T Consensus 1 ~m~a~~~~~~~-----~~~~~~~~~~~~----~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~ 69 (334)
T PTZ00354 1 MMRAVTLKGFG-----GVDVLKIGESPK----PAPKRNDVLIKVSAAGVNRADTLQRQGKYPPP--PGSSEILGLEVAGY 69 (334)
T ss_pred CcEEEEEEecC-----CCcceEEEeCCC----CCCCCCEEEEEEEEEecCHHHHHHhCCCCCCC--CCCCcccceeeEEE
Confidence 47888888653 345677777644 57889999999999999999998887643221 12222344589999
Q ss_pred EEEeccCCCCCCCCCEEEecc---CCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEE
Q 042784 92 ARVIRSKDSKYSDGDIVLRAF---LPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNV 168 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~~---g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~V 168 (356)
|+++|+++..+++||+|+ ++ |+|++|+.++.+.++.+ |++++.++ ++.+++++.+||+++...+++++|++|
T Consensus 70 v~~vG~~v~~~~~Gd~V~-~~~~~g~~~~~~~v~~~~~~~i---p~~~~~~~-a~~~~~~~~ta~~~l~~~~~~~~~~~v 144 (334)
T PTZ00354 70 VEDVGSDVKRFKEGDRVM-ALLPGGGYAEYAVAHKGHVMHI---PQGYTFEE-AAAIPEAFLTAWQLLKKHGDVKKGQSV 144 (334)
T ss_pred EEEeCCCCCCCCCCCEEE-EecCCCceeeEEEecHHHcEeC---CCCCCHHH-HHHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 999999999999999999 53 89999999999888555 99999988 788999999999999877899999999
Q ss_pred EEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHC-CCCceEEEECCchhhH
Q 042784 169 FVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYF-PNGIDVYLDNVGGKML 247 (356)
Q Consensus 169 lV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~-~~~~d~vld~~g~~~~ 247 (356)
+|+|++|++|++++++|+..|++++++++++++.+.++ ++|++.++++....++.+.+++.+ ++++|++|||+|+..+
T Consensus 145 lI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 223 (334)
T PTZ00354 145 LIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYL 223 (334)
T ss_pred EEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHH
Confidence 99999999999999999999998888888999999997 899988888865223777888877 4589999999999899
Q ss_pred HHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccccc-----chHHHHHHHHHHHHHcCCeee
Q 042784 248 EAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM-----DRFADFTVEMESYIKEGKIRS 322 (356)
Q Consensus 248 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~g~i~~ 322 (356)
..++++++++|+++.+|...+.. ....+...++.+..++.+....... ....+.++++++++.++.+.+
T Consensus 224 ~~~~~~l~~~g~~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 297 (334)
T PTZ00354 224 SETAEVLAVDGKWIVYGFMGGAK------VEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKP 297 (334)
T ss_pred HHHHHHhccCCeEEEEecCCCCc------ccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccC
Confidence 99999999999999998543211 0102334445666677776544311 122255678889999999988
Q ss_pred eeeEEeChhhHHHHHHHHHcCCCcceEEEEecCC
Q 042784 323 KHVIYYGVESFLESLGSLFSSSNIGKVVIQVKAP 356 (356)
Q Consensus 323 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~ 356 (356)
.+...+++++++++++.+.+++..+|+|+++.+|
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~~ 331 (334)
T PTZ00354 298 IVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNEP 331 (334)
T ss_pred ccccEEcHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence 7777899999999999999888889999988764
No 52
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.3e-36 Score=278.14 Aligned_cols=324 Identities=27% Similarity=0.447 Sum_probs=257.6
Q ss_pred eeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 12 ESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
.||+|.+..+. ...++.+++++.+. |.+.++||+|||.++++|+.|++...|.......+|..+| ++++|+
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g--~e~~G~ 71 (329)
T cd08250 1 SFRKLVVHRLS---PNFREATSIVDVPV----PLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCG--FEGVGE 71 (329)
T ss_pred CceEEEeccCC---CCcccCceEEecCC----CCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccC--ceeEEE
Confidence 37899998754 33467889988755 6789999999999999999999988765432223334445 489999
Q ss_pred EEEeccCCCCCCCCCEEEec-cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEE
Q 042784 92 ARVIRSKDSKYSDGDIVLRA-FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFV 170 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~-~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV 170 (356)
|+.+|+++..+++||+|+.. .|+|++|+.++.+.++.+ |++ +.+ ++++++++.|||+++...+++.+|++|+|
T Consensus 72 v~~vG~~v~~~~~Gd~V~~~~~g~~~s~~~v~~~~~~~i---p~~--~~~-~a~l~~~~~ta~~~l~~~~~~~~~~~vlI 145 (329)
T cd08250 72 VVAVGEGVTDFKVGDAVATMSFGAFAEYQVVPARHAVPV---PEL--KPE-VLPLLVSGLTASIALEEVGEMKSGETVLV 145 (329)
T ss_pred EEEECCCCCCCCCCCEEEEecCcceeEEEEechHHeEEC---CCC--cch-hhhcccHHHHHHHHHHHhcCCCCCCEEEE
Confidence 99999999999999999932 489999999999887554 776 345 68899999999999987888999999999
Q ss_pred EcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchhhHHHH
Q 042784 171 SAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAV 250 (356)
Q Consensus 171 ~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~ 250 (356)
+|++|++|.+++++|+..|++|+++++++++.+.++ ++|++.++++.+ .++.+.+.+..++++|++|||+|+..+..+
T Consensus 146 ~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~-~~~~~~~~~~~~~~vd~v~~~~g~~~~~~~ 223 (329)
T cd08250 146 TAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-SLGCDRPINYKT-EDLGEVLKKEYPKGVDVVYESVGGEMFDTC 223 (329)
T ss_pred EeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-HcCCceEEeCCC-ccHHHHHHHhcCCCCeEEEECCcHHHHHHH
Confidence 999999999999999999999999998999999997 899988888765 566666766666689999999999889999
Q ss_pred HHhcccCCEEEEEecccccccc-cccc-cchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeeeee--eE
Q 042784 251 LNHVNVHARIILCGMISQYNKV-WTER-DGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRSKH--VI 326 (356)
Q Consensus 251 ~~~l~~~G~~v~~g~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~~--~~ 326 (356)
+++++++|+++.+|........ ...+ .........+.+++++.+.....+.....+.+.++++++.++.+.+.+ ..
T Consensus 224 ~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 303 (329)
T cd08250 224 VDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTR 303 (329)
T ss_pred HHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCcc
Confidence 9999999999999875431100 0000 000112244678888888876544333557788899999999998743 34
Q ss_pred EeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 327 YYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 327 ~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
.++++++++|++.+.++...+|+|++
T Consensus 304 ~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 304 FRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred ccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 69999999999999988888899874
No 53
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=8.4e-37 Score=279.40 Aligned_cols=323 Identities=37% Similarity=0.648 Sum_probs=256.1
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCC--ccCceeeeeE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQF--NLNQVILAFG 90 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~--~~g~~~~~~G 90 (356)
+++|.+.+. +.++++++.+++++.+. |++.+++|+||+.++++|+.|+....+.. ....+. ....+++++|
T Consensus 2 ~~~~~~~~~-~~~~~~~~~~~~~~~~~----p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~g~e~~G 74 (329)
T cd05288 2 NRQVVLAKR-PEGPPPPDDFELVEVPL----PELKDGEVLVRTLYLSVDPYMRGWMSDAK--SYSPPVQLGEPMRGGGVG 74 (329)
T ss_pred CcEEEEecc-CCCCCCccceeEEeccC----CCCCCCeEEEEEEEEecCHHHhhhhccCc--ccCCCccCCCcccCceEE
Confidence 678988765 44457889999998865 77899999999999999998876554321 111111 1223458899
Q ss_pred EEEEeccCCCCCCCCCEEEeccCCeeeEEeecC-CcccccCCCCCCCC--ccccccccCchhhhHHHHHHHhCCCCCCCE
Q 042784 91 IARVIRSKDSKYSDGDIVLRAFLPVAEYSLLPC-DLLTRKLDPASGIP--FPDYLSSLGIPGFAAWVGIEVLGQPKSGSN 167 (356)
Q Consensus 91 ~v~~vg~~v~~~~~Gd~V~~~~g~~a~~~~v~~-~~~~~~i~~P~~~s--~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 167 (356)
+|+++|++ ++++||+|+ ++++|++|+.++. +.++.+ |++++ +...++++++++.|||+++...+++.++++
T Consensus 75 ~V~~~G~~--~~~~Gd~V~-~~~~~~~~~~v~~~~~~~~l---P~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~ 148 (329)
T cd05288 75 EVVESRSP--DFKVGDLVS-GFLGWQEYAVVDGASGLRKL---DPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGET 148 (329)
T ss_pred EEEecCCC--CCCCCCEEe-cccceEEEEEecchhhcEEC---CcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCE
Confidence 99999965 799999999 8899999999999 887554 88885 444233499999999999987788999999
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchhhH
Q 042784 168 VFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKML 247 (356)
Q Consensus 168 VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~ 247 (356)
|+|+|++|++|++++++|+..|++|+++++++++.+.+++.+|+++++++++ .++.+.+.+.+++++|++|||+|+..+
T Consensus 149 vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~v~~~~~~~~d~vi~~~g~~~~ 227 (329)
T cd05288 149 VVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKT-PDLAEALKEAAPDGIDVYFDNVGGEIL 227 (329)
T ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCC-hhHHHHHHHhccCCceEEEEcchHHHH
Confidence 9999999999999999999999999999989999999983399988998876 567777887776789999999999999
Q ss_pred HHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeeeeeeEE
Q 042784 248 EAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRSKHVIY 327 (356)
Q Consensus 248 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~~~~~ 327 (356)
..++++++++|+++.+|........ ......+....+.+++++.+...........+.+.++++++.++.+.+.....
T Consensus 228 ~~~~~~l~~~G~~v~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~ 305 (329)
T cd05288 228 DAALTLLNKGGRIALCGAISQYNAT--EPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVV 305 (329)
T ss_pred HHHHHhcCCCceEEEEeeccCcccc--cccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcccccccc
Confidence 9999999999999999875432100 00001123445678888888766544334456788899999999998776667
Q ss_pred eChhhHHHHHHHHHcCCCcceEEE
Q 042784 328 YGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 328 ~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
++++++.++++.+.+++..||+|+
T Consensus 306 ~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 306 EGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred ccHHHHHHHHHHHhcCCCccceeC
Confidence 999999999999998888888874
No 54
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.2e-36 Score=280.78 Aligned_cols=309 Identities=19% Similarity=0.208 Sum_probs=244.2
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCC------------------
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDG------------------ 74 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~------------------ 74 (356)
||++.+.+. +.++.+.+.+. + |.|.+.+++|+|||.++++|++|++.+.|.+..
T Consensus 1 ~~a~~~~~~-----~~~~~~~~~~~-~--~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 72 (350)
T cd08274 1 MRAVLLTGH-----GGLDKLVYRDD-V--PVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWG 72 (350)
T ss_pred CeEEEEecc-----CCccceeeccc-C--CCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCcccccccccccccccccc
Confidence 467766543 23456666542 1 226689999999999999999999988764321
Q ss_pred -CccCCCccCceeeeeEEEEEeccCCCCCCCCCEEEec---------------------cCCeeeEEeecCCcccccCCC
Q 042784 75 -LYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVLRA---------------------FLPVAEYSLLPCDLLTRKLDP 132 (356)
Q Consensus 75 -~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------~g~~a~~~~v~~~~~~~~i~~ 132 (356)
....|..+| +|++|+|+.+|++++++++||+|+.. .|++++|+.++.+.++++
T Consensus 73 ~~~~~p~~~G--~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i--- 147 (350)
T cd08274 73 GTLSFPRIQG--ADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPV--- 147 (350)
T ss_pred CCCCCCcccC--CcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeC---
Confidence 112233445 48999999999999999999999831 289999999999887554
Q ss_pred CCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Q 042784 133 ASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD 212 (356)
Q Consensus 133 P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~ 212 (356)
|+++++++ ++++++++.|||+++ ..+++++|++|||+|++|++|++++++|+.+|++|++++.++ +.+.++ ++|++
T Consensus 148 p~~~~~~~-~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~-~~g~~ 223 (350)
T cd08274 148 NSPLSDVE-LATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVR-ALGAD 223 (350)
T ss_pred CCCCCHHH-HHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHH-hcCCe
Confidence 99999988 789999999999998 578899999999999999999999999999999999888655 888887 89987
Q ss_pred ceeecCChhhHHHHHHHHC-CCCceEEEECCchhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceE
Q 042784 213 DAFNYNSEMSFDAALTKYF-PNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVK 291 (356)
Q Consensus 213 ~v~~~~~~~~~~~~i~~~~-~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (356)
.+.+... ..+.+ .+.+ ++++|++|||+|+..+..++++++++|+++.+|..... ....+...++.++++
T Consensus 224 ~~~~~~~-~~~~~--~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-------~~~~~~~~~~~~~~~ 293 (350)
T cd08274 224 TVILRDA-PLLAD--AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGP-------VVELDLRTLYLKDLT 293 (350)
T ss_pred EEEeCCC-ccHHH--HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCc-------cccCCHHHhhhcceE
Confidence 5554432 33333 3444 46899999999999999999999999999999865321 012244555778888
Q ss_pred EEEEecccccchHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 292 MEGFMIGSHMDRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 292 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
+.+..... .+.++++++++.++.+.+.+..+|+++++.+|++.+.++...+|+|+++
T Consensus 294 ~~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 294 LFGSTLGT-----REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred EEEeecCC-----HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 88776532 3568889999999999887778999999999999999888889999863
No 55
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=2.8e-36 Score=275.42 Aligned_cols=313 Identities=21% Similarity=0.301 Sum_probs=245.1
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||++++..++ +++.+++++.++ |.+.++||+||+.++++|+.|+....|..... .+++...++|++|+|
T Consensus 1 ~~a~~~~~~~-----~~~~~~~~~~~~----p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v 69 (325)
T cd05280 1 FKALVVEEQD-----GGVSLFLRTLPL----DDLPEGDVLIRVHYSSLNYKDALAATGNGGVT--RNYPHTPGIDAAGTV 69 (325)
T ss_pred CceEEEcccC-----CCCcceEEeCCC----CCCCCCeEEEEEEEeecChHHHHHhcCCCCCC--CCCCCccCcccEEEE
Confidence 5778887653 335899988866 77899999999999999999999888753221 222333445899999
Q ss_pred EEeccCCCCCCCCCEEEec--------cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCC--
Q 042784 93 RVIRSKDSKYSDGDIVLRA--------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQP-- 162 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~--------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~-- 162 (356)
+++ +++.+++||+|+.. .|+|++|+.++.+.++.+ |+++++++ ++.+++.+.+||+++....+.
T Consensus 70 ~~~--~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~l---p~~~~~~~-aa~~~~~~~ta~~~l~~~~~~~~ 143 (325)
T cd05280 70 VSS--DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPL---PEGLSLRE-AMILGTAGFTAALSVHRLEDNGQ 143 (325)
T ss_pred EEe--CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhhEEEC---CCCCCHHH-HHhhHHHHHHHHHHHHHHhhccC
Confidence 998 45689999999932 589999999999887555 99999999 789999999999998755433
Q ss_pred C-CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEEC
Q 042784 163 K-SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDN 241 (356)
Q Consensus 163 ~-~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~ 241 (356)
. .+++|+|+|++|++|++++++|+..|++|+++++++++.+.++ ++|++.++++.+ . ..+..+...++++|++|||
T Consensus 144 ~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~-~~~~~~~~~~~~~d~vi~~ 220 (325)
T cd05280 144 TPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLGASEVLDRED-L-LDESKKPLLKARWAGAIDT 220 (325)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEcchh-H-HHHHHHHhcCCCccEEEEC
Confidence 5 3579999999999999999999999999999999999999998 899988887653 1 2222333445679999999
Q ss_pred CchhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccccc-chHHHHHHHHHHHHHcCCe
Q 042784 242 VGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM-DRFADFTVEMESYIKEGKI 320 (356)
Q Consensus 242 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~g~i 320 (356)
+|+..+..++++++++|+++.+|...... .......++.+++++.+....... ....+.++.+.+++..+ +
T Consensus 221 ~~~~~~~~~~~~l~~~g~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 292 (325)
T cd05280 221 VGGDVLANLLKQTKYGGVVASCGNAAGPE-------LTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPD-L 292 (325)
T ss_pred CchHHHHHHHHhhcCCCEEEEEecCCCCc-------cccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcC-C
Confidence 99999999999999999999998754311 112333445788888887654332 23345667777777777 4
Q ss_pred eeeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 321 RSKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 321 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
.+.+..+|++++++++++.+.+++..||+|+++
T Consensus 293 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 293 LEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred ccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 445777999999999999999999999999864
No 56
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=1.8e-36 Score=281.22 Aligned_cols=308 Identities=19% Similarity=0.240 Sum_probs=252.0
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|++.... ..+++++.++ |.++++||+||+.++++|+.|+....|.... ..|..+ +++++|+|
T Consensus 1 ~~a~~~~~~~-------~~~~~~~~~~----~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~p~~~--g~e~~G~v 65 (367)
T cd08263 1 MKAAVLKGPN-------PPLTIEEIPV----PRPKEGEILIRVAACGVCHSDLHVLKGELPF--PPPFVL--GHEISGEV 65 (367)
T ss_pred CeeEEEecCC-------CCcEEEEeeC----CCCCCCeEEEEEEEeeeCcchHHHhcCCCCC--CCCccc--ccccceEE
Confidence 5788888652 4578887765 6789999999999999999999988764422 223344 45899999
Q ss_pred EEeccCCCC---CCCCCEEEe---------------------------------------------------ccCCeeeE
Q 042784 93 RVIRSKDSK---YSDGDIVLR---------------------------------------------------AFLPVAEY 118 (356)
Q Consensus 93 ~~vg~~v~~---~~~Gd~V~~---------------------------------------------------~~g~~a~~ 118 (356)
+.+|+++.+ +++||+|+. ..|+|++|
T Consensus 66 ~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 145 (367)
T cd08263 66 VEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEY 145 (367)
T ss_pred EEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeE
Confidence 999999988 999999983 13889999
Q ss_pred EeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeC
Q 042784 119 SLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCK-VVGSTG 197 (356)
Q Consensus 119 ~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~-V~~~~~ 197 (356)
+.++.+.++.+ |+++++.+ +++++.+++|||+++.+.+.+.++++|+|+| +|++|.+++++|+..|++ |++++.
T Consensus 146 ~~~~~~~~~~~---P~~is~~~-aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~ 220 (367)
T cd08263 146 AVVPATALAPL---PESLDYTE-SAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDV 220 (367)
T ss_pred EEechhhEEEC---CCCCCHHH-HhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeC
Confidence 99999888555 99999998 7999999999999998888889999999996 699999999999999996 999988
Q ss_pred ChHHHHHHHHHhCCCceeecCChhhHHHHHHHHC-CCCceEEEECCchh-hHHHHHHhcccCCEEEEEeccccccccccc
Q 042784 198 SDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYF-PNGIDVYLDNVGGK-MLEAVLNHVNVHARIILCGMISQYNKVWTE 275 (356)
Q Consensus 198 s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~-~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 275 (356)
++++.+.++ ++|++.+++++. .++.+.+++.. +.++|++||++|+. ....++++++++|+++.+|......
T Consensus 221 s~~~~~~~~-~~g~~~v~~~~~-~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~----- 293 (367)
T cd08263 221 RDEKLAKAK-ELGATHTVNAAK-EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGA----- 293 (367)
T ss_pred CHHHHHHHH-HhCCceEecCCc-ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCC-----
Confidence 999999997 899998998876 67777888776 45899999999987 8899999999999999998643211
Q ss_pred ccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeeee--eeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 276 RDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRSK--HVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
....+...++.+++++.+..... ..+.++++++++.++.+.+. +++.++++++.++++.+++++..||+|++
T Consensus 294 -~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 294 -TAEIPITRLVRRGIKIIGSYGAR----PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred -ccccCHHHHhhCCeEEEecCCCC----cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 11123344556788877643221 14578889999999998864 56789999999999999999888999874
No 57
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.9e-36 Score=279.54 Aligned_cols=310 Identities=19% Similarity=0.171 Sum_probs=241.4
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||++++..+ +.+++++.+. |.+.++||+|||.++++|++|++...|.... ...|..+| ++++|+|
T Consensus 1 mka~~~~~~--------~~~~l~~~~~----p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G--~e~~G~V 65 (351)
T cd08285 1 MKAFAMLGI--------GKVGWIEKPI----PVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILG--HEAVGVV 65 (351)
T ss_pred CceEEEccC--------CccEEEECCC----CCCCCCeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccC--cceEEEE
Confidence 567777753 3467877755 6789999999999999999999888764322 12234444 5999999
Q ss_pred EEeccCCCCCCCCCEEEe--------------------------------ccCCeeeEEeecCC--cccccCCCCCCCCc
Q 042784 93 RVIRSKDSKYSDGDIVLR--------------------------------AFLPVAEYSLLPCD--LLTRKLDPASGIPF 138 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~--------------------------------~~g~~a~~~~v~~~--~~~~~i~~P~~~s~ 138 (356)
+++|++++++++||+|+. ..|+|+||+.++.+ .++. + |+++++
T Consensus 66 ~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~-l--P~~~~~ 142 (351)
T cd08285 66 EEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAP-L--PDGLTD 142 (351)
T ss_pred EEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEE-C--CCCCCH
Confidence 999999999999999993 14889999999974 5534 4 999999
Q ss_pred cccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeec
Q 042784 139 PDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNY 217 (356)
Q Consensus 139 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~ 217 (356)
++ ++.++..+.|||+++ ..+++++|++|||+| +|++|++++|+|+..|+ .|+++++++++.++++ ++|++.++++
T Consensus 143 ~~-aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~ 218 (351)
T cd08285 143 EQ-AVMLPDMMSTGFHGA-ELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAK-EYGATDIVDY 218 (351)
T ss_pred HH-hhhhccchhhHHHHH-HccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCceEecC
Confidence 98 788889999999997 578899999999997 59999999999999999 6899988888999998 8999999988
Q ss_pred CChhhHHHHHHHHC-CCCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEE
Q 042784 218 NSEMSFDAALTKYF-PNGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGF 295 (356)
Q Consensus 218 ~~~~~~~~~i~~~~-~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (356)
.. .++.+.+.+++ +.++|++|||+|+ ..+..++++++++|+++.+|...... ... .....+....+...+.+.
T Consensus 219 ~~-~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~~-~~~~~~~~~~~~~~i~~~ 293 (351)
T cd08285 219 KN-GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDD---YLP-IPREEWGVGMGHKTINGG 293 (351)
T ss_pred CC-CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCc---eee-cChhhhhhhccccEEEEe
Confidence 76 67777788776 4589999999997 58899999999999999998754311 000 000111122334444433
Q ss_pred ecccccchHHHHHHHHHHHHHcCCeee---eeeEEeChhhHHHHHHHHHcCC-CcceEEEEe
Q 042784 296 MIGSHMDRFADFTVEMESYIKEGKIRS---KHVIYYGVESFLESLGSLFSSS-NIGKVVIQV 353 (356)
Q Consensus 296 ~~~~~~~~~~~~l~~~~~~~~~g~i~~---~~~~~~~~~~~~~a~~~~~~~~-~~gkvvi~~ 353 (356)
.... .++.++++++++.+|++++ .++.+|+++++++|++.+.+++ ...|+++++
T Consensus 294 ~~~~----~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 294 LCPG----GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred ecCC----ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 2111 2356788999999999987 3445699999999999999887 467999874
No 58
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=2.2e-36 Score=279.00 Aligned_cols=309 Identities=17% Similarity=0.171 Sum_probs=248.5
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCC---------CccCCCccC
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDG---------LYFPQFNLN 83 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~---------~~~~~~~~g 83 (356)
||+|+..... ..+++++.++ |++.++||+||+.++++|++|++...|.... ....+++..
T Consensus 1 ~~a~~~~~~~-------~~~~~~~~~~----p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 69 (350)
T cd08240 1 MKAAAVVEPG-------KPLEEVEIDT----PKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLV 69 (350)
T ss_pred CeeEEeccCC-------CCceEEecCC----CCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcc
Confidence 5677776542 4478887755 7789999999999999999999988764210 001112233
Q ss_pred ceeeeeEEEEEeccCCCCCCCCCEEEe-----------------------------ccCCeeeEEeecCCcccccCCCCC
Q 042784 84 QVILAFGIARVIRSKDSKYSDGDIVLR-----------------------------AFLPVAEYSLLPCDLLTRKLDPAS 134 (356)
Q Consensus 84 ~~~~~~G~v~~vg~~v~~~~~Gd~V~~-----------------------------~~g~~a~~~~v~~~~~~~~i~~P~ 134 (356)
.+++++|+|+++|++++.+++||+|+. ..|++++|+.++.+.++.+ |+
T Consensus 70 ~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---p~ 146 (350)
T cd08240 70 LGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVD---PG 146 (350)
T ss_pred cccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeC---CC
Confidence 445899999999999999999999983 2488999999999887555 99
Q ss_pred CCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCc
Q 042784 135 GIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDD 213 (356)
Q Consensus 135 ~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~ 213 (356)
++++++ ++++.+.++|||+++.....+.++++|+|+| +|++|++++|+|+..|+ +|++++.++++.+.++ ++|++.
T Consensus 147 ~~s~~~-aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~ 223 (350)
T cd08240 147 GLDPAL-AATLACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAK-AAGADV 223 (350)
T ss_pred CCCHHH-eehhhchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCcE
Confidence 999998 7899999999999998777777899999997 59999999999999999 8999998999999997 899988
Q ss_pred eeecCChhhHHHHHHHHCCCCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEE
Q 042784 214 AFNYNSEMSFDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKM 292 (356)
Q Consensus 214 v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (356)
++++++ .++.+.+.+..++++|++||++|. ..+..++++|+++|+++.+|...... .........+++++
T Consensus 224 ~~~~~~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~--------~~~~~~~~~~~~~i 294 (350)
T cd08240 224 VVNGSD-PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEA--------TLPLPLLPLRALTI 294 (350)
T ss_pred EecCCC-ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCC--------cccHHHHhhcCcEE
Confidence 888765 566677777665589999999985 68899999999999999998754311 11122233477777
Q ss_pred EEEecccccchHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 293 EGFMIGSHMDRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 293 ~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
.+..... .+.+.+++++++++.+++.+...|+++++++|++.+.+++..||++++
T Consensus 295 ~~~~~~~-----~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 295 QGSYVGS-----LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred EEcccCC-----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 7765443 256788999999999987777789999999999999999989999985
No 59
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=2.9e-36 Score=275.69 Aligned_cols=315 Identities=20% Similarity=0.184 Sum_probs=250.7
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|.+..+ +.++.+++++.+. |.++++||+||+.++++|++|.+...|.+.. ..++...+++++|+|
T Consensus 2 ~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v 69 (327)
T PRK10754 2 AKRIEFHKH-----GGPEVLQAVEFTP----ADPAENEVQVENKAIGINYIDTYIRSGLYPP---PSLPSGLGTEAAGVV 69 (327)
T ss_pred ceEEEEecc-----CChhHeEEeeccC----CCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC---CCCCCccCcceEEEE
Confidence 778888754 5678899998865 7789999999999999999999988764321 223334455899999
Q ss_pred EEeccCCCCCCCCCEEEec---cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEE
Q 042784 93 RVIRSKDSKYSDGDIVLRA---FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVF 169 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~---~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~Vl 169 (356)
+.+|++++.+++||+|++. .|+|++|+.++.+.++.+ |+++++++ ++.++..+++||.++...+++.+|++|+
T Consensus 70 ~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~l---p~~~~~~~-~~~~~~~~~ta~~~l~~~~~~~~g~~vl 145 (327)
T PRK10754 70 SKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAIL---PDAISFEQ-AAASFLKGLTVYYLLRKTYEIKPDEQFL 145 (327)
T ss_pred EEeCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHHceeC---CCCCCHHH-HHHHHHHHHHHHHHHHhhcCCCCCCEEE
Confidence 9999999999999999832 389999999999887554 99999988 7888899999999998788899999999
Q ss_pred EEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCC-CCceEEEECCchhhHH
Q 042784 170 VSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFP-NGIDVYLDNVGGKMLE 248 (356)
Q Consensus 170 V~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~-~~~d~vld~~g~~~~~ 248 (356)
|+|++|.+|++++++|+..|++|++++.++++.+.++ ++|++++++++. .++.+.+++.++ +++|++|||+|+..+.
T Consensus 146 I~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vl~~~~~~~~~ 223 (327)
T PRK10754 146 FHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK-KAGAWQVINYRE-ENIVERVKEITGGKKVRVVYDSVGKDTWE 223 (327)
T ss_pred EEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEEcCCC-CcHHHHHHHHcCCCCeEEEEECCcHHHHH
Confidence 9999999999999999999999999999999999997 899988888776 678888888774 5899999999998889
Q ss_pred HHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceE-EEEEec---ccccchHHHHHHHHHHHHHcCCeeee-
Q 042784 249 AVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVK-MEGFMI---GSHMDRFADFTVEMESYIKEGKIRSK- 323 (356)
Q Consensus 249 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~l~~~~~~~~~g~i~~~- 323 (356)
..+++++++|+++.+|...... . ......+..++.. ...... ........+.++++++++.+|.+++.
T Consensus 224 ~~~~~l~~~g~~v~~g~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~ 296 (327)
T PRK10754 224 ASLDCLQRRGLMVSFGNASGPV-----T--GVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDV 296 (327)
T ss_pred HHHHHhccCCEEEEEccCCCCC-----C--CcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeec
Confidence 9999999999999998754210 0 0111111122211 111111 11112233556778999999999864
Q ss_pred -eeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 324 -HVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 324 -~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
+.+.|+++++.++++.+.++...+|+|++
T Consensus 297 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 297 AEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred ccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 45789999999999999999999999986
No 60
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=3.7e-36 Score=276.55 Aligned_cols=309 Identities=17% Similarity=0.180 Sum_probs=253.4
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||++++++++ +..+++++.++ |.+.++||+||+.++++|+.|.....|........+..+| ++++|+|
T Consensus 1 m~a~~~~~~~------~~~~~~~~~~~----~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g--~e~~G~V 68 (341)
T cd08297 1 MKAAVVEEFG------EKPYEVKDVPV----PEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGG--HEGAGVV 68 (341)
T ss_pred CceEEeeccC------CCCceEEEeeC----CCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCC--cccceEE
Confidence 5788887542 46888988866 6789999999999999999999888764422111233344 4899999
Q ss_pred EEeccCCCCCCCCCEEEec------------------------------cCCeeeEEeecCCcccccCCCCCCCCccccc
Q 042784 93 RVIRSKDSKYSDGDIVLRA------------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYL 142 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~------------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~a 142 (356)
+.+|++++.+++||+|+.. .|++++|+.++.+.++.+ |++++.++ +
T Consensus 69 ~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~l---p~~~~~~~-~ 144 (341)
T cd08297 69 VAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPI---PDGLSFEQ-A 144 (341)
T ss_pred EEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEEC---CCCCCHHH-H
Confidence 9999999999999999831 588999999999888554 99999998 7
Q ss_pred cccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhh
Q 042784 143 SSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMS 222 (356)
Q Consensus 143 a~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~ 222 (356)
++++..++|||+++.. .+++++++|||+|+++++|++++++|+++|++|++++.++++.+.++ ++|++.++++.+ .+
T Consensus 145 a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~-~~ 221 (341)
T cd08297 145 APLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-ELGADAFVDFKK-SD 221 (341)
T ss_pred HHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCcEEEcCCC-cc
Confidence 8899999999999975 58999999999999888999999999999999999999999999997 899998998876 57
Q ss_pred HHHHHHHHC-CCCceEEEECCc-hhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccc
Q 042784 223 FDAALTKYF-PNGIDVYLDNVG-GKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSH 300 (356)
Q Consensus 223 ~~~~i~~~~-~~~~d~vld~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (356)
+.+.+.+.+ ++++|++||+.+ ...+..++++++++|+++.+|..... ....+...+..+++++.+.....
T Consensus 222 ~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~- 293 (341)
T cd08297 222 DVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGG-------FIPLDPFDLVLRGITIVGSLVGT- 293 (341)
T ss_pred HHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCC-------CCCCCHHHHHhcccEEEEeccCC-
Confidence 888888877 468999999666 46888999999999999999865421 11123345567888887754332
Q ss_pred cchHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 301 MDRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 301 ~~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
.+.++++++++.++.+.+.+ ..|++++++++++.+.++...||+|+++
T Consensus 294 ----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 294 ----RQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred ----HHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 36788899999999998755 5799999999999999999999999875
No 61
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.1e-36 Score=272.71 Aligned_cols=301 Identities=21% Similarity=0.230 Sum_probs=244.4
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|++.+. + |..+++++.+. |.++++||+||+.++++|+.|.+...+. ..+..+| ++++|+|
T Consensus 1 ~~~~~~~~~-----~-~~~~~~~~~~~----p~~~~~ev~v~v~~~~i~~~d~~~~~~~-----~~~~~~g--~e~~G~v 63 (305)
T cd08270 1 MRALVVDPD-----A-PLRLRLGEVPD----PQPAPHEALVRVAAISLNRGELKFAAER-----PDGAVPG--WDAAGVV 63 (305)
T ss_pred CeEEEEccC-----C-CceeEEEecCC----CCCCCCEEEEEEEEEecCHHHHHhhccC-----CCCCccc--ceeEEEE
Confidence 467777643 2 56788888755 6789999999999999999999876521 2233444 4899999
Q ss_pred EEeccCCCCCCCCCEEEec--cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEE
Q 042784 93 RVIRSKDSKYSDGDIVLRA--FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFV 170 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~--~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV 170 (356)
+++|+++..+++||+|+.. .|+|++|+.++.++++.+ |+++++++ ++++++.+.|||+++...... +|++|+|
T Consensus 64 ~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~i---p~~~~~~~-a~~~~~~~~ta~~~~~~~~~~-~~~~vli 138 (305)
T cd08270 64 ERAAADGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVL---PDGVSFAQ-AATLPVAGVTALRALRRGGPL-LGRRVLV 138 (305)
T ss_pred EEeCCCCCCCCCCCEEEEecCCcceeeEEEEchHHeEEC---CCCCCHHH-HHHhHhHHHHHHHHHHHhCCC-CCCEEEE
Confidence 9999999999999999932 489999999999888555 99999998 799999999999999876655 5999999
Q ss_pred EcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchhhHHHH
Q 042784 171 SAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAV 250 (356)
Q Consensus 171 ~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~ 250 (356)
+|++|++|.+++++++..|++|+++++++++.+.++ ++|++..++.. . ++.++++|+++||+|+..+..+
T Consensus 139 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~--~-------~~~~~~~d~vl~~~g~~~~~~~ 208 (305)
T cd08270 139 TGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLR-ELGAAEVVVGG--S-------ELSGAPVDLVVDSVGGPQLARA 208 (305)
T ss_pred ECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecc--c-------cccCCCceEEEECCCcHHHHHH
Confidence 999999999999999999999999999999999999 79987555432 1 1233579999999999889999
Q ss_pred HHhcccCCEEEEEecccccccccccccchhhhhhhhc--cceEEEEEecccccchHHHHHHHHHHHHHcCCeeeeeeEEe
Q 042784 251 LNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIG--KEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRSKHVIYY 328 (356)
Q Consensus 251 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~~~~~~ 328 (356)
+++++++|+++.+|..... ....+...+.. ++.++.++.... .....+.++.+++++.++++.+.+..++
T Consensus 209 ~~~l~~~G~~v~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 280 (305)
T cd08270 209 LELLAPGGTVVSVGSSSGE-------PAVFNPAAFVGGGGGRRLYTFFLYD-GEPLAADLARLLGLVAAGRLDPRIGWRG 280 (305)
T ss_pred HHHhcCCCEEEEEeccCCC-------cccccHHHHhcccccceEEEEEccC-HHHHHHHHHHHHHHHHCCCccceeccEE
Confidence 9999999999999875421 11123333333 588888877654 2334567889999999999998777899
Q ss_pred ChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 329 GVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 329 ~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
+++++++|++.+.+++..||+|+++
T Consensus 281 ~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 281 SWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred cHHHHHHHHHHHHcCCCCceEEEeC
Confidence 9999999999999999899999874
No 62
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=3.1e-36 Score=274.92 Aligned_cols=304 Identities=21% Similarity=0.216 Sum_probs=251.3
Q ss_pred CCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEEEeccCCCCCCCCCEEE
Q 042784 30 DHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVL 109 (356)
Q Consensus 30 ~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~ 109 (356)
+.+++++.+. |.+.+++|+|||.++++|+.|.....|........+..+| ++++|+|+.+|++++.+++||+|+
T Consensus 12 ~~~~~~~~~~----~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g--~e~~G~v~~~G~~v~~~~~Gd~V~ 85 (323)
T cd05282 12 LVLELVSLPI----PPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPG--NEGVGVVVEVGSGVSGLLVGQRVL 85 (323)
T ss_pred ceEEeEeCCC----CCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCC--cceEEEEEEeCCCCCCCCCCCEEE
Confidence 3677777654 6789999999999999999999988764332222223444 589999999999999999999999
Q ss_pred ec--cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHH
Q 042784 110 RA--FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKL 187 (356)
Q Consensus 110 ~~--~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~ 187 (356)
.. .|+|++|+.++.+.++++ |++++.++ ++.+++.+.+||+++...+++.+|++|+|+|++|.+|++++++|+.
T Consensus 86 ~~~~~g~~~~~~~~~~~~~~~l---p~~~~~~~-~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~ 161 (323)
T cd05282 86 PLGGEGTWQEYVVAPADDLIPV---PDSISDEQ-AAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKL 161 (323)
T ss_pred EeCCCCcceeEEecCHHHeEEC---CCCCCHHH-HHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHH
Confidence 32 589999999999877554 99999988 7889999999999998888899999999999999999999999999
Q ss_pred CCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCC-CCceEEEECCchhhHHHHHHhcccCCEEEEEecc
Q 042784 188 KGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFP-NGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMI 266 (356)
Q Consensus 188 ~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~-~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~ 266 (356)
+|++|++++.++++.+.++ ++|++.++++.+ .++.+.+.+.++ +++|++|||+|+.....++++++++|+++.+|..
T Consensus 162 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~ 239 (323)
T cd05282 162 LGFKTINVVRRDEQVEELK-ALGADEVIDSSP-EDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLL 239 (323)
T ss_pred CCCeEEEEecChHHHHHHH-hcCCCEEecccc-hhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccC
Confidence 9999999999999999997 899998998876 567778887774 5899999999998888899999999999999875
Q ss_pred cccccccccccchhhhhhhhccceEEEEEeccccc-----chHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHH
Q 042784 267 SQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM-----DRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLF 341 (356)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~ 341 (356)
.... ...+...+..+++++.+.....+. ....+.++++++++.++.+.+.+.+.|+++++.+|++.+.
T Consensus 240 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~ 312 (323)
T cd05282 240 SGEP-------VPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAE 312 (323)
T ss_pred CCCC-------CCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHh
Confidence 4310 112233334488888887765542 2345678889999999999887778899999999999999
Q ss_pred cCCCcceEEEE
Q 042784 342 SSSNIGKVVIQ 352 (356)
Q Consensus 342 ~~~~~gkvvi~ 352 (356)
+++..+|+|++
T Consensus 313 ~~~~~~kvv~~ 323 (323)
T cd05282 313 QPGRGGKVLLT 323 (323)
T ss_pred cCCCCceEeeC
Confidence 88888899863
No 63
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=4.4e-36 Score=276.69 Aligned_cols=306 Identities=22% Similarity=0.195 Sum_probs=245.5
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCC-CCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSI-PDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
||+|++... +.+++.+.+. |.+ .++||+|||.++++|+.|++...|.+.. .+++...+++++|+
T Consensus 1 ~ka~~~~~~--------~~~~~~~~~~----p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~ 65 (347)
T cd05278 1 MKALVYLGP--------GKIGLEEVPD----PKIQGPHDAIVRVTATSICGSDLHIYRGGVPG---AKHGMILGHEFVGE 65 (347)
T ss_pred CceEEEecC--------CceEEEEcCC----CCCCCCCeEEEEEEEEEechhhHHHHcCCCCC---CCCCceeccceEEE
Confidence 467777743 4578887755 677 8999999999999999999988875432 22233444589999
Q ss_pred EEEeccCCCCCCCCCEEEe--------------------------------ccCCeeeEEeecCC--cccccCCCCCCCC
Q 042784 92 ARVIRSKDSKYSDGDIVLR--------------------------------AFLPVAEYSLLPCD--LLTRKLDPASGIP 137 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~--------------------------------~~g~~a~~~~v~~~--~~~~~i~~P~~~s 137 (356)
|+++|++++++++||+|+. ..|+|++|+.++++ .++++ |++++
T Consensus 66 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~l---P~~~~ 142 (347)
T cd05278 66 VVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKI---PDGLP 142 (347)
T ss_pred EEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEEC---CCCCC
Confidence 9999999999999999983 14899999999987 56444 99999
Q ss_pred ccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceee
Q 042784 138 FPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFN 216 (356)
Q Consensus 138 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~ 216 (356)
+++ ++.++.+++|||+++ ...++++|++|+|.|+ |++|.+++|+|+.+|+ +|+++++++++.+.++ ++|++.+++
T Consensus 143 ~~~-aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~-~~g~~~vi~ 218 (347)
T cd05278 143 DED-ALMLSDILPTGFHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAK-EAGATDIIN 218 (347)
T ss_pred HHH-Hhhhcchhhheeehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-HhCCcEEEc
Confidence 998 789999999999998 5788999999999875 9999999999999997 8999888888888888 899988998
Q ss_pred cCChhhHHHHHHHHCC-CCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEE
Q 042784 217 YNSEMSFDAALTKYFP-NGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEG 294 (356)
Q Consensus 217 ~~~~~~~~~~i~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (356)
+++ .++.+.+++.++ +++|++||++|+ ..+..++++++++|+++.+|...... . . ......+.+++++.+
T Consensus 219 ~~~-~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~-~-~~~~~~~~~~~~~~~ 290 (347)
T cd05278 219 PKN-GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPD-----P-L-PLLGEWFGKNLTFKT 290 (347)
T ss_pred CCc-chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCc-----c-c-CccchhhhceeEEEe
Confidence 876 567788887764 589999999987 68899999999999999998643311 0 0 011223467777766
Q ss_pred EecccccchHHHHHHHHHHHHHcCCeeee--eeEEeChhhHHHHHHHHHcCCC-cceEEEEe
Q 042784 295 FMIGSHMDRFADFTVEMESYIKEGKIRSK--HVIYYGVESFLESLGSLFSSSN-IGKVVIQV 353 (356)
Q Consensus 295 ~~~~~~~~~~~~~l~~~~~~~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~-~gkvvi~~ 353 (356)
..... .+.++++++++.++.+.+. +...|+++++++|++.+..++. .+|+|+++
T Consensus 291 ~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 291 GLVPV-----RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred eccCc-----hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 54322 4578889999999998863 5568999999999999988776 67998763
No 64
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=5.1e-36 Score=273.90 Aligned_cols=314 Identities=18% Similarity=0.256 Sum_probs=238.3
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|++... +.+..+++++.++ |.+.++||+||+.++++|++|.....+........+..+| +|++|+|
T Consensus 1 ~~a~~~~~~-----~~~~~~~~~~~~~----p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g--~e~~G~V 69 (326)
T cd08289 1 FQALVVEKD-----EDDVSVSVKNLTL----DDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPG--IDLAGTV 69 (326)
T ss_pred CeeEEEecc-----CCcceeEEEEccC----CCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcc--cceeEEE
Confidence 578888754 2345788888755 6789999999999999999998765421111111234444 5899999
Q ss_pred EEeccCCCCCCCCCEEEec--------cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhC--C-
Q 042784 93 RVIRSKDSKYSDGDIVLRA--------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLG--Q- 161 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~--------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~--~- 161 (356)
+..| +..+++||+|+.. .|+|++|+.++++.+... |+++++++ ++.+++++.|||+++.... .
T Consensus 70 ~~~~--~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~---p~~~~~~~-a~~~~~~~~ta~~~l~~~~~~~~ 143 (326)
T cd08289 70 VESN--DPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPL---PKGLTLKE-AMILGTAGFTAALSIHRLEENGL 143 (326)
T ss_pred EEcC--CCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHHeEEC---CCCCCHHH-HhhhhhHHHHHHHHHHHHHhcCC
Confidence 8854 5679999999932 589999999999888554 99999998 7899999999999886432 2
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEEC
Q 042784 162 PKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDN 241 (356)
Q Consensus 162 ~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~ 241 (356)
...+++|+|+|++|++|.+++++|+.+|++|+++++++++.+.++ ++|++.++++++ . ..+.+.+++++++|++|||
T Consensus 144 ~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~-~-~~~~~~~~~~~~~d~vld~ 220 (326)
T cd08289 144 TPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-KLGAKEVIPREE-L-QEESIKPLEKQRWAGAVDP 220 (326)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-HcCCCEEEcchh-H-HHHHHHhhccCCcCEEEEC
Confidence 345789999999999999999999999999999999999999998 899988888764 2 3455666655689999999
Q ss_pred CchhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccc-cchHHHHHHHHHHHHHcCCe
Q 042784 242 VGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSH-MDRFADFTVEMESYIKEGKI 320 (356)
Q Consensus 242 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~g~i 320 (356)
+|+..+..++++++++|+++.+|...... .......++.+++++.+...... .....+.++.+.+.+....+
T Consensus 221 ~g~~~~~~~~~~l~~~G~~i~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (326)
T cd08289 221 VGGKTLAYLLSTLQYGGSVAVSGLTGGGE-------VETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKPTQL 293 (326)
T ss_pred CcHHHHHHHHHHhhcCCEEEEEeecCCCC-------CCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCcccc
Confidence 99998999999999999999998753211 11123445578888888753221 11223444445444433334
Q ss_pred eeeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 321 RSKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 321 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
...+..+|+++++.+||+.+.+++..||+|+++
T Consensus 294 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 294 LNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred ccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 445678999999999999999999999999864
No 65
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=1e-35 Score=273.32 Aligned_cols=305 Identities=18% Similarity=0.184 Sum_probs=243.1
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||++++..++ ....+++.++ |.++++||+|||.++++|+.|++...|.... ..+..+| ++++|+|
T Consensus 1 mka~~~~~~~-------~~~~~~~~~~----p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~--~~~~~~g--~e~~G~V 65 (338)
T PRK09422 1 MKAAVVNKDH-------TGDVVVEKTL----RPLKHGEALVKMEYCGVCHTDLHVANGDFGD--KTGRILG--HEGIGIV 65 (338)
T ss_pred CeEEEecCCC-------CCceEEEecC----CCCCCCeEEEEEEEEeechhHHHHHcCCCCC--CCCccCC--cccceEE
Confidence 5778877542 1222777755 7799999999999999999999988765321 1233444 5899999
Q ss_pred EEeccCCCCCCCCCEEEec------------------------------cCCeeeEEeecCCcccccCCCCCCCCccccc
Q 042784 93 RVIRSKDSKYSDGDIVLRA------------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYL 142 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~------------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~a 142 (356)
+.+|++++.|++||+|++. .|++++|+.++.+.++.. |+++++++ +
T Consensus 66 ~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~---p~~~~~~~-a 141 (338)
T PRK09422 66 KEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKV---PEGLDPAQ-A 141 (338)
T ss_pred EEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeC---CCCCCHHH-e
Confidence 9999999999999999831 489999999999877544 99999998 7
Q ss_pred cccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHH-CCCEEEEEeCChHHHHHHHHHhCCCceeecCChh
Q 042784 143 SSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKL-KGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEM 221 (356)
Q Consensus 143 a~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~-~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 221 (356)
++++..++|||+++ ..+++++|++|||+| +|++|++++++|+. .|++|+++++++++.+.++ ++|++.+++++...
T Consensus 142 a~l~~~~~ta~~~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~ 218 (338)
T PRK09422 142 SSITCAGVTTYKAI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAK-EVGADLTINSKRVE 218 (338)
T ss_pred ehhhcchhHHHHHH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHH-HcCCcEEecccccc
Confidence 99999999999998 578899999999999 59999999999998 4999999999999999997 89998888875324
Q ss_pred hHHHHHHHHCCCCce-EEEECCchhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccc
Q 042784 222 SFDAALTKYFPNGID-VYLDNVGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSH 300 (356)
Q Consensus 222 ~~~~~i~~~~~~~~d-~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (356)
++.+.+++.++ ++| +++++.+...+..++++++++|+++.+|..... ...+...+..+...+.+.....
T Consensus 219 ~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~- 288 (338)
T PRK09422 219 DVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPES--------MDLSIPRLVLDGIEVVGSLVGT- 288 (338)
T ss_pred cHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCC--------ceecHHHHhhcCcEEEEecCCC-
Confidence 56677777665 688 555666667899999999999999999865321 1123344455667776543321
Q ss_pred cchHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEEec
Q 042784 301 MDRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQVK 354 (356)
Q Consensus 301 ~~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 354 (356)
.+.+++++++++++.+.+.++ .++++++++|++.+.++...||+|+.+.
T Consensus 289 ----~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 289 ----RQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred ----HHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 356788999999999877655 6899999999999999999999998764
No 66
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=1.4e-35 Score=270.74 Aligned_cols=311 Identities=21% Similarity=0.293 Sum_probs=243.8
Q ss_pred eeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEE
Q 042784 14 KEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIAR 93 (356)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~ 93 (356)
||++++.. ++++.++++++|+ |.+.++||+||+.++++|++|.+...|.+... .+++...+++++|+|+
T Consensus 1 ~a~~~~~~-----~~~~~~~~~~~~~----p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~V~ 69 (323)
T TIGR02823 1 KALVVEKE-----DGKVSAQVETLDL----SDLPEGDVLIKVAYSSLNYKDALAITGKGGVV--RSYPMIPGIDAAGTVV 69 (323)
T ss_pred CeEEEccC-----CCCcceeEeecCC----CCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCC--CCCCccceeeeEEEEE
Confidence 45666643 4567889999866 77999999999999999999999888754221 2223344458999998
Q ss_pred EeccCCCCCCCCCEEEec--------cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHh--CCCC
Q 042784 94 VIRSKDSKYSDGDIVLRA--------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVL--GQPK 163 (356)
Q Consensus 94 ~vg~~v~~~~~Gd~V~~~--------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~--~~~~ 163 (356)
. +++..|++||+|+.. .|++++|+.++.+.++.+ |+++++++ ++.++..+.+|+.++... +.+.
T Consensus 70 ~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~i---P~~~~~~~-aa~~~~~~~ta~~~~~~~~~~~~~ 143 (323)
T TIGR02823 70 S--SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPL---PEGLSLRE-AMALGTAGFTAALSVMALERNGLT 143 (323)
T ss_pred e--cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhheEEC---CCCCCHHH-hhhhhhhHHHHHHHHHHhhhcCCC
Confidence 8 567789999999932 489999999999887554 99999998 789999999999887543 3378
Q ss_pred CCC-EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECC
Q 042784 164 SGS-NVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNV 242 (356)
Q Consensus 164 ~g~-~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~ 242 (356)
+|+ +|+|+|++|.+|.+++++|+.+|++|++++.++++.+.++ ++|++.+++..+ .+. .++.+.++++|.++||+
T Consensus 144 ~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~--~~~~~~~~~~d~vld~~ 219 (323)
T TIGR02823 144 PEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLK-ELGASEVIDRED-LSP--PGKPLEKERWAGAVDTV 219 (323)
T ss_pred CCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-hcCCcEEEcccc-HHH--HHHHhcCCCceEEEECc
Confidence 898 9999999999999999999999999998888888889997 899988887654 222 45555555699999999
Q ss_pred chhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccccc-chHHHHHHHHHHHHHcCCee
Q 042784 243 GGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM-DRFADFTVEMESYIKEGKIR 321 (356)
Q Consensus 243 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~g~i~ 321 (356)
|+..+..++++++++|+++.+|...... ...+...++.+++++.+....... ....+.++++.+++..+.+.
T Consensus 220 g~~~~~~~~~~l~~~G~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (323)
T TIGR02823 220 GGHTLANVLAQLKYGGAVAACGLAGGPD-------LPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLE 292 (323)
T ss_pred cHHHHHHHHHHhCCCCEEEEEcccCCCC-------ccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCc
Confidence 9988999999999999999998763210 111223455788888886543221 22335567777888888876
Q ss_pred eeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 322 SKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 322 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
+. ...|+++++++|++.+.+++..+|+|+++
T Consensus 293 ~~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 293 SI-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred Cc-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 64 45899999999999999999999999864
No 67
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1.2e-35 Score=273.61 Aligned_cols=310 Identities=19% Similarity=0.191 Sum_probs=250.4
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|++..++ ..+++++.+. |.+.+++|+||+.++++|+.|+....|.... . .++...+++++|+|
T Consensus 1 m~a~~~~~~~-------~~~~~~~~~~----~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~--~~~~~~g~e~~G~V 66 (345)
T cd08260 1 MRAAVYEEFG-------EPLEIREVPD----PEPPPDGVVVEVEACGVCRSDWHGWQGHDPD-V--TLPHVPGHEFAGVV 66 (345)
T ss_pred CeeEEEecCC-------CCcEEEEccC----CCCCCCeEEEEEEEeeccHHHHHHhcCCCCC-C--CCCeeeccceeEEE
Confidence 6888887553 3478887755 6789999999999999999999988875332 1 22334445899999
Q ss_pred EEeccCCCCCCCCCEEEe-----------------------------ccCCeeeEEeecCC--cccccCCCCCCCCcccc
Q 042784 93 RVIRSKDSKYSDGDIVLR-----------------------------AFLPVAEYSLLPCD--LLTRKLDPASGIPFPDY 141 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~-----------------------------~~g~~a~~~~v~~~--~~~~~i~~P~~~s~~~~ 141 (356)
+.+|+++..+++||+|+. ..|+|++|+.++.. .++.+ |++++.++
T Consensus 67 ~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~i---P~~~~~~~- 142 (345)
T cd08260 67 VEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRL---PDDVDFVT- 142 (345)
T ss_pred EEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEEC---CCCCCHHH-
Confidence 999999999999999983 15899999999974 56444 99999988
Q ss_pred ccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChh
Q 042784 142 LSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEM 221 (356)
Q Consensus 142 aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 221 (356)
++.++..++|||+++...+++.++++|+|+| +|++|++++++|+..|++|++++.++++.+.++ ++|+++++++++..
T Consensus 143 aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~ 220 (345)
T cd08260 143 AAGLGCRFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELAR-ELGAVATVNASEVE 220 (345)
T ss_pred hhhhccchHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HhCCCEEEccccch
Confidence 7899999999999997788899999999999 699999999999999999999999999999998 79999899887424
Q ss_pred hHHHHHHHHCCCCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccc
Q 042784 222 SFDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSH 300 (356)
Q Consensus 222 ~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (356)
++.+.+.++.++++|++|||+|+ ..+..++++++++|+++.+|...... .....++..++.+++++.+.....
T Consensus 221 ~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~- 294 (345)
T cd08260 221 DVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEE-----AGVALPMDRVVARELEIVGSHGMP- 294 (345)
T ss_pred hHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCC-----CccccCHHHHhhcccEEEeCCcCC-
Confidence 66777777765589999999985 68889999999999999998754311 001123334457778877765422
Q ss_pred cchHHHHHHHHHHHHHcCCeeee--eeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 301 MDRFADFTVEMESYIKEGKIRSK--HVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 301 ~~~~~~~l~~~~~~~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
.+.++++++++.++.+.+. +...++++++++|++.+.+++..||+|++
T Consensus 295 ----~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 295 ----AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred ----HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 3567889999999988763 56789999999999999999999998864
No 68
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.1e-35 Score=277.44 Aligned_cols=306 Identities=16% Similarity=0.124 Sum_probs=244.8
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCC-CCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSI-PDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
|+++++.. ++.+++++.+. |.| ++++|+||+.++++|++|...+.|.+.. .. ++...++|++|+
T Consensus 1 m~a~~~~~--------~~~~~~~~~~~----p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~--~p~~~G~e~~G~ 65 (386)
T cd08283 1 MKALVWHG--------KGDVRVEEVPD----PKIEDPTDAIVRVTATAICGSDLHLYHGYIPG-MK--KGDILGHEFMGV 65 (386)
T ss_pred CeeEEEec--------CCCceEEeCCC----CCCCCCCeEEEEEEEEecchhhhhhhcCCCCC-CC--CCccccccceEE
Confidence 56777652 36788888755 666 5999999999999999999999875433 12 334445599999
Q ss_pred EEEeccCCCCCCCCCEEEec-------------------------------------------------cCCeeeEEeec
Q 042784 92 ARVIRSKDSKYSDGDIVLRA-------------------------------------------------FLPVAEYSLLP 122 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~-------------------------------------------------~g~~a~~~~v~ 122 (356)
|+++|+++.++++||+|+.. .|+|++|++++
T Consensus 66 V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~ 145 (386)
T cd08283 66 VEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVP 145 (386)
T ss_pred EEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcc
Confidence 99999999999999999831 37899999999
Q ss_pred CC--cccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCh
Q 042784 123 CD--LLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSD 199 (356)
Q Consensus 123 ~~--~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~ 199 (356)
.+ .++. + |+++++++ +++++..++|||+++ ..+++.+|++|+|+|+ |++|.+++++|+..|+ +|++++.++
T Consensus 146 ~~~~~~~~-l--p~~~~~~~-aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~~~~~ 219 (386)
T cd08283 146 FADVGPFK-I--PDDLSDEK-ALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAIDRVP 219 (386)
T ss_pred cccCeEEE-C--CCCCCHHH-HhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCH
Confidence 87 5544 4 99999998 788999999999999 6788999999999974 9999999999999998 699999999
Q ss_pred HHHHHHHHHhCCCceeecCChhhHHHHHHHHCC-CCceEEEECCchh----------------------hHHHHHHhccc
Q 042784 200 DNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFP-NGIDVYLDNVGGK----------------------MLEAVLNHVNV 256 (356)
Q Consensus 200 ~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~-~~~d~vld~~g~~----------------------~~~~~~~~l~~ 256 (356)
++.++++ +++...++++....++.+.++++++ +++|++|||+|++ .+..+++++++
T Consensus 220 ~~~~~~~-~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 298 (386)
T cd08283 220 ERLEMAR-SHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRK 298 (386)
T ss_pred HHHHHHH-HcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhcc
Confidence 9999999 6744457777652248888888774 4899999999742 67889999999
Q ss_pred CCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHH
Q 042784 257 HARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFL 334 (356)
Q Consensus 257 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~ 334 (356)
+|+++.+|..... ....+....+.+++++.+.... ..+.++++++++.++++.+ .++..|+++++.
T Consensus 299 ~G~iv~~g~~~~~-------~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~ 366 (386)
T cd08283 299 GGTVSIIGVYGGT-------VNKFPIGAAMNKGLTLRMGQTH-----VQRYLPRLLELIESGELDPSFIITHRLPLEDAP 366 (386)
T ss_pred CCEEEEEcCCCCC-------cCccCHHHHHhCCcEEEeccCC-----chHHHHHHHHHHHcCCCChhHceEEEecHHHHH
Confidence 9999999875431 1112333457788888876432 2356888999999999986 356789999999
Q ss_pred HHHHHHHcCC-CcceEEEE
Q 042784 335 ESLGSLFSSS-NIGKVVIQ 352 (356)
Q Consensus 335 ~a~~~~~~~~-~~gkvvi~ 352 (356)
+|++.+.++. ..+|+|++
T Consensus 367 ~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 367 EAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred HHHHHHHhCCCCeEEEEec
Confidence 9999998776 56799986
No 69
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.5e-35 Score=269.89 Aligned_cols=310 Identities=21% Similarity=0.242 Sum_probs=246.3
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||++.+.+. +.++.+++.+.+. |.++++||+||+.++++|+.|.....|.... ...|..+| ++++|+|
T Consensus 1 ~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g--~e~~G~v 68 (320)
T cd08243 1 MKAIVIEQP-----GGPEVLKLREIPI----PEPKPGWVLIRVKAFGLNRSEIFTRQGHSPS-VKFPRVLG--IEAVGEV 68 (320)
T ss_pred CeEEEEcCC-----CCccceEEeecCC----CCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCcccc--ceeEEEE
Confidence 456666532 3345677776644 5689999999999999999999988764321 12233444 5899999
Q ss_pred EEeccCCCCCCCCCEEEecc---------CCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCC
Q 042784 93 RVIRSKDSKYSDGDIVLRAF---------LPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPK 163 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~~---------g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~ 163 (356)
+.+|. ..+++||+|+ ++ |+|++|+.++.+.++++ |+++++++ ++++++++.|||+++.+..+++
T Consensus 69 ~~vG~--~~~~~Gd~V~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i---p~~~~~~~-aa~~~~~~~ta~~~l~~~~~~~ 141 (320)
T cd08243 69 EEAPG--GTFTPGQRVA-TAMGGMGRTFDGSYAEYTLVPNEQVYAI---DSDLSWAE-LAALPETYYTAWGSLFRSLGLQ 141 (320)
T ss_pred EEecC--CCCCCCCEEE-EecCCCCCCCCcccceEEEcCHHHcEeC---CCCCCHHH-HHhcchHHHHHHHHHHHhcCCC
Confidence 99995 5799999999 43 89999999999887555 99999988 7999999999999998888899
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
+|++|+|+|++|++|.+++++|+..|++|++++.++++.+.++ ++|++++++. . .++.+.++++ ++++|+++||+|
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~-~-~~~~~~i~~~-~~~~d~vl~~~~ 217 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVID-D-GAIAEQLRAA-PGGFDKVLELVG 217 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEec-C-ccHHHHHHHh-CCCceEEEECCC
Confidence 9999999999999999999999999999999999999999997 8999877754 3 5677778777 778999999999
Q ss_pred hhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeeee
Q 042784 244 GKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRSK 323 (356)
Q Consensus 244 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~ 323 (356)
+..+..++++++++|+++.+|........ ..... .....+.+++++.++..... ..+.+++++++++++.+++.
T Consensus 218 ~~~~~~~~~~l~~~g~~v~~g~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 291 (320)
T cd08243 218 TATLKDSLRHLRPGGIVCMTGLLGGQWTL--EDFNP-MDDIPSGVNLTLTGSSSGDV---PQTPLQELFDFVAAGHLDIP 291 (320)
T ss_pred hHHHHHHHHHhccCCEEEEEccCCCCccc--CCcch-hhhhhhccceEEEecchhhh---hHHHHHHHHHHHHCCceecc
Confidence 98899999999999999999875431100 00000 11112356777776654332 13567889999999999887
Q ss_pred eeEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 324 HVIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 324 ~~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
+...|+++++++|++.+.+++..+|+|+
T Consensus 292 ~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 292 PSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred cccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 7778999999999999998888889886
No 70
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=6.4e-36 Score=274.58 Aligned_cols=306 Identities=19% Similarity=0.166 Sum_probs=244.2
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
|++++++.. + ++.+++++.+. |+++++||+||+.++++|++|+....+.. ....+..+ +++++|+|
T Consensus 1 m~a~~~~~~-----~-~~~~~~~~~~~----p~~~~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~--g~e~~G~v 66 (339)
T cd08249 1 QKAAVLTGP-----G-GGLLVVVDVPV----PKPGPDEVLVKVKAVALNPVDWKHQDYGF--IPSYPAIL--GCDFAGTV 66 (339)
T ss_pred CceEEeccC-----C-CCcccccCCCC----CCCCCCEEEEEEEEEEcCchheeeeeccc--ccCCCcee--eeeeeEEE
Confidence 567777643 2 57788888755 78999999999999999999998875432 11123334 45899999
Q ss_pred EEeccCCCCCCCCCEEEec----------cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCC
Q 042784 93 RVIRSKDSKYSDGDIVLRA----------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQP 162 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~----------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~ 162 (356)
+.+|++++.+++||+|+.. .|+|++|+.++.+.++.+ |+++++++ ++.+++.+.|||+++.+..++
T Consensus 67 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i---p~~~~~~~-~~~~~~~~~ta~~~l~~~~~~ 142 (339)
T cd08249 67 VEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKI---PDNISFEE-AATLPVGLVTAALALFQKLGL 142 (339)
T ss_pred EEeCCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhheEEC---CCCCCHHH-ceecchHHHHHHHHHhccccC
Confidence 9999999999999999932 289999999999887554 99999998 789999999999998766554
Q ss_pred ----------CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCC
Q 042784 163 ----------KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFP 232 (356)
Q Consensus 163 ----------~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~ 232 (356)
.++++|+|+|++|++|++++++|+..|++|++++ ++++.+.++ ++|+++++++.+ .++.+.++++++
T Consensus 143 ~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~-~~g~~~v~~~~~-~~~~~~l~~~~~ 219 (339)
T cd08249 143 PLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVK-SLGADAVFDYHD-PDVVEDIRAATG 219 (339)
T ss_pred CCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHH-hcCCCEEEECCC-chHHHHHHHhcC
Confidence 7899999999999999999999999999999888 668889997 899998999876 678888888777
Q ss_pred CCceEEEECCch-hhHHHHHHhccc--CCEEEEEecccccccccccccchhhhhhhhccceEEEE---Eecc----cccc
Q 042784 233 NGIDVYLDNVGG-KMLEAVLNHVNV--HARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEG---FMIG----SHMD 302 (356)
Q Consensus 233 ~~~d~vld~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~ 302 (356)
+++|++||++|. ..+..+++++++ +|+++.+|...... .+..+.++.. ..+. ....
T Consensus 220 ~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (339)
T cd08249 220 GKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET--------------EPRKGVKVKFVLGYTVFGEIPEDRE 285 (339)
T ss_pred CCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc--------------cCCCCceEEEEEeeeeccccccccc
Confidence 789999999998 789999999999 99999998754311 0111122222 2211 1112
Q ss_pred hHHHHHHHHHHHHHcCCeeeeeeEEeC--hhhHHHHHHHHHcCC-CcceEEEEe
Q 042784 303 RFADFTVEMESYIKEGKIRSKHVIYYG--VESFLESLGSLFSSS-NIGKVVIQV 353 (356)
Q Consensus 303 ~~~~~l~~~~~~~~~g~i~~~~~~~~~--~~~~~~a~~~~~~~~-~~gkvvi~~ 353 (356)
.....++++++++.++.+.+.+...++ ++++++|++.+.+++ ..+|+|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 286 FGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred chHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 234567889999999999887666788 999999999999988 889999874
No 71
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=3.2e-35 Score=272.93 Aligned_cols=311 Identities=16% Similarity=0.155 Sum_probs=240.6
Q ss_pred eeeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 12 ESKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
++|+.++... ++.+++++.|. |++.++||+|||.++++|++|.+...|... ...|..+| +|++|+
T Consensus 7 ~~~a~~~~~~-------~~~~~l~~~p~----p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~--~~~p~v~G--~e~~G~ 71 (373)
T cd08299 7 KCKAAVLWEP-------KKPFSIEEIEV----APPKAHEVRIKIVATGICRSDDHVVSGKLV--TPFPVILG--HEAAGI 71 (373)
T ss_pred eeEEEEEecC-------CCCcEEEEeec----CCCCCCEEEEEEEEEEcCcccHHHhcCCCC--CCCCcccc--ccceEE
Confidence 3666655532 24588888765 778999999999999999999999887531 12334444 599999
Q ss_pred EEEeccCCCCCCCCCEEEec--------------------------------------------------cCCeeeEEee
Q 042784 92 ARVIRSKDSKYSDGDIVLRA--------------------------------------------------FLPVAEYSLL 121 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~--------------------------------------------------~g~~a~~~~v 121 (356)
|+++|++++.+++||+|+.. .|+|+||+++
T Consensus 72 V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v 151 (373)
T cd08299 72 VESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVV 151 (373)
T ss_pred EEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEe
Confidence 99999999999999999832 3789999999
Q ss_pred cCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChH
Q 042784 122 PCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDD 200 (356)
Q Consensus 122 ~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~ 200 (356)
+.+.++++ |+++++++ ++.+.+++.+||+++...+++++|++|+|+|+ |++|++++++|+..|+ +|++++++++
T Consensus 152 ~~~~~~~l---P~~l~~~~-aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~ 226 (373)
T cd08299 152 DEIAVAKI---DAAAPLEK-VCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVDINKD 226 (373)
T ss_pred cccceeeC---CCCCChHH-hheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHH
Confidence 99888554 99999998 78899999999999877889999999999975 9999999999999999 8999999999
Q ss_pred HHHHHHHHhCCCceeecCCh-hhHHHHHHHHCCCCceEEEECCch-hhHHHHHHhc-ccCCEEEEEeccccccccccccc
Q 042784 201 NVKLLKEEFGYDDAFNYNSE-MSFDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHV-NVHARIILCGMISQYNKVWTERD 277 (356)
Q Consensus 201 ~~~~~~~~~g~~~v~~~~~~-~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~ 277 (356)
+++.++ ++|+++++++.+. .++.+.+.+++++++|+++||+|. ..+..++..+ +++|+++.+|...... .
T Consensus 227 ~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~-----~- 299 (373)
T cd08299 227 KFAKAK-ELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQ-----N- 299 (373)
T ss_pred HHHHHH-HcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCc-----e-
Confidence 999998 8999988887641 236677777776789999999996 5677767655 6799999998754310 0
Q ss_pred chhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCe--eeeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 278 GVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKI--RSKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
...... .+.++.++.++..+.+.+ .+.+.++++++.++.+ ++.++++|+++++.+|++.+.+++. .|+++++
T Consensus 300 ~~~~~~-~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 300 LSINPM-LLLTGRTWKGAVFGGWKS--KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred eecCHH-HHhcCCeEEEEEecCCcc--HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 111111 234677888877665432 2344556666666644 4457789999999999999887664 5887753
No 72
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=3e-35 Score=270.09 Aligned_cols=303 Identities=19% Similarity=0.175 Sum_probs=245.2
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|++..+ +.+++.+.++ |.+.++||+|||.++++|+.|+....|..... +++...+++++|+|
T Consensus 1 ~~a~~~~~~--------~~~~~~~~~~----~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~---~~~~~~g~e~~G~V 65 (337)
T cd08261 1 MKALVCEKP--------GRLEVVDIPE----PVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA---SYPRILGHELSGEV 65 (337)
T ss_pred CeEEEEeCC--------CceEEEECCC----CCCCCCeEEEEEEEEeEcccChHHHcCCCCcC---CCCcccccccEEEE
Confidence 577777642 4678888755 77899999999999999999999887643221 22334455899999
Q ss_pred EEeccCCCCCCCCCEEEe-----------------------------ccCCeeeEEeecCCcccccCCCCCCCCcccccc
Q 042784 93 RVIRSKDSKYSDGDIVLR-----------------------------AFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLS 143 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~-----------------------------~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa 143 (356)
+.+|++++.+++||+|+. ..|+|++|+.++++ ++++ |+++++++ ++
T Consensus 66 ~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~---p~~~~~~~-aa 140 (337)
T cd08261 66 VEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLV---PEGLSLDQ-AA 140 (337)
T ss_pred EEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEEC---CCCCCHHH-hh
Confidence 999999999999999983 15899999999998 7554 99999998 56
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhH
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 223 (356)
.+ ..+.++++++ ...++.+|++|||+| +|.+|.+++++|+.+|++|+++.+++++.+.++ ++|+++++++.+ .++
T Consensus 141 ~~-~~~~~a~~~~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~-~~g~~~v~~~~~-~~~ 215 (337)
T cd08261 141 LV-EPLAIGAHAV-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFAR-ELGADDTINVGD-EDV 215 (337)
T ss_pred hh-chHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHH-HhCCCEEecCcc-cCH
Confidence 55 6788899888 678999999999997 599999999999999999999988999999997 899999999886 568
Q ss_pred HHHHHHHCC-CCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccccc
Q 042784 224 DAALTKYFP-NGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM 301 (356)
Q Consensus 224 ~~~i~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (356)
.+.+.++++ .++|+++||+|+ ..+..++++++++|+++.+|..... ...+...+..+++++.+..
T Consensus 216 ~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~--------~~~~~~~~~~~~~~~~~~~----- 282 (337)
T cd08261 216 AARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGP--------VTFPDPEFHKKELTILGSR----- 282 (337)
T ss_pred HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCC--------CccCHHHHHhCCCEEEEec-----
Confidence 888888764 579999999976 5788999999999999998865421 1112234455667766542
Q ss_pred chHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcC-CCcceEEEEe
Q 042784 302 DRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSS-SNIGKVVIQV 353 (356)
Q Consensus 302 ~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~-~~~gkvvi~~ 353 (356)
....+.++++++++.++.+++ .+..++++++++++++.+.++ ...+|+|+++
T Consensus 283 ~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 283 NATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred cCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 123467888999999999987 677789999999999999988 4778999875
No 73
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=2.1e-35 Score=271.49 Aligned_cols=308 Identities=18% Similarity=0.147 Sum_probs=240.2
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|+.+..+ +.+++.+.+. |.|+++||+||+.++++|++|.+++.|........++++..+++++|+|
T Consensus 1 ~~~~~~~~~~-------~~~~~~~~~~----p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V 69 (341)
T PRK05396 1 MKALVKLKAE-------PGLWLTDVPV----PEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEV 69 (341)
T ss_pred CceEEEecCC-------CceEEEECCC----CCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEE
Confidence 4677776432 6789988866 7899999999999999999999987653211111223334455999999
Q ss_pred EEeccCCCCCCCCCEEEe-----------------------------ccCCeeeEEeecCCcccccCCCCCCCCcccccc
Q 042784 93 RVIRSKDSKYSDGDIVLR-----------------------------AFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLS 143 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~-----------------------------~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa 143 (356)
+++|++++.+++||+|+. ..|+|++|+.++.+.++.+ |+++++++ ++
T Consensus 70 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i---P~~l~~~~-~~ 145 (341)
T PRK05396 70 VEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKI---PDDIPDDL-AA 145 (341)
T ss_pred EEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEEC---cCCCCHHH-hH
Confidence 999999999999999993 1489999999999887554 99999987 44
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeecCChhh
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMS 222 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~ 222 (356)
+...+.++++++.. ...+|++|+|+|+ |++|++++++|+..|+ +|++++.++++.++++ ++|++.++++++ .+
T Consensus 146 -~~~~~~~~~~~~~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~lg~~~~~~~~~-~~ 219 (341)
T PRK05396 146 -IFDPFGNAVHTALS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITDVNEYRLELAR-KMGATRAVNVAK-ED 219 (341)
T ss_pred -hhhHHHHHHHHHHc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCcEEecCcc-cc
Confidence 45666677666542 3468999999875 9999999999999999 7888888889998888 899999998876 67
Q ss_pred HHHHHHHHC-CCCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccc
Q 042784 223 FDAALTKYF-PNGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSH 300 (356)
Q Consensus 223 ~~~~i~~~~-~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (356)
+.+.+++++ ++++|++|||.|. ..+..++++++++|+++.+|...... ......+..+++++.++.....
T Consensus 220 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--------~~~~~~~~~~~~~l~~~~~~~~ 291 (341)
T PRK05396 220 LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDM--------AIDWNKVIFKGLTIKGIYGREM 291 (341)
T ss_pred HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCC--------cccHHHHhhcceEEEEEEccCc
Confidence 888888877 4589999999886 47889999999999999998754311 1123455667777777642221
Q ss_pred cchHHHHHHHHHHHHHcC-CeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEEec
Q 042784 301 MDRFADFTVEMESYIKEG-KIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQVK 354 (356)
Q Consensus 301 ~~~~~~~l~~~~~~~~~g-~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 354 (356)
.+.+..+++++.++ ++.+.+..+++++++++|++.+.+++ .||+|++++
T Consensus 292 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 292 ----FETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred ----cchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 23456678888888 56566778899999999999998877 799999864
No 74
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=3.2e-35 Score=270.12 Aligned_cols=304 Identities=17% Similarity=0.127 Sum_probs=238.6
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||++++.. ++.+++++++. |.|+++||+||+.++++|++|.+...|.... .+++...++|++|+|
T Consensus 1 m~a~~~~~--------~~~~~~~~~~~----p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~---~~~p~i~G~e~~G~V 65 (339)
T PRK10083 1 MKSIVIEK--------PNSLAIEERPI----PQPAAGEVRVKVKLAGICGSDSHIYRGHNPF---AKYPRVIGHEFFGVI 65 (339)
T ss_pred CeEEEEec--------CCeeEEEeccC----CCCCCCeEEEEEEEEEEcccchHHHcCCCCc---CCCCcccccceEEEE
Confidence 46777764 25688888865 7789999999999999999999988764321 123444455999999
Q ss_pred EEeccCCCCCCCCCEEEe--------------------------c---cCCeeeEEeecCCcccccCCCCCCCCcccccc
Q 042784 93 RVIRSKDSKYSDGDIVLR--------------------------A---FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLS 143 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~--------------------------~---~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa 143 (356)
+.+|+++..+++||+|++ + .|+|++|+.++.+.++++ |++++.+. +
T Consensus 66 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i---p~~~~~~~-a- 140 (339)
T PRK10083 66 DAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRI---PDAIADQY-A- 140 (339)
T ss_pred EEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEEC---cCCCCHHH-H-
Confidence 999999999999999972 1 489999999999888555 99999987 4
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHH-CCC-EEEEEeCChHHHHHHHHHhCCCceeecCChh
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKL-KGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEM 221 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~-~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 221 (356)
++...+.++++++ ..+++++|++|+|+| +|++|++++|+|+. +|+ .|+++++++++.++++ ++|+++++++++ .
T Consensus 141 ~~~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~-~ 216 (339)
T PRK10083 141 VMVEPFTIAANVT-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAK-ESGADWVINNAQ-E 216 (339)
T ss_pred hhhchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHH-HhCCcEEecCcc-c
Confidence 4667888888655 578899999999999 59999999999996 699 5777888899999998 899999998875 5
Q ss_pred hHHHHHHHHCCCCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccc
Q 042784 222 SFDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSH 300 (356)
Q Consensus 222 ~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (356)
++.+.+.. .+.++|++||++|. ..+..++++++++|+++.+|..... .. .+...+..+++++.+...
T Consensus 217 ~~~~~~~~-~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~---~~~~~~~~~~~~~~~~~~--- 284 (339)
T PRK10083 217 PLGEALEE-KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEP-----SE---IVQQGITGKELSIFSSRL--- 284 (339)
T ss_pred cHHHHHhc-CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-----ce---ecHHHHhhcceEEEEEec---
Confidence 56666543 23357899999995 5889999999999999999875421 11 122233356777665432
Q ss_pred cchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcC-CCcceEEEEecC
Q 042784 301 MDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSS-SNIGKVVIQVKA 355 (356)
Q Consensus 301 ~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~-~~~gkvvi~~~~ 355 (356)
..+.++++++++.++.+.+ .++++|+++++++|++.+.++ ...+|+|+++.+
T Consensus 285 ---~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 285 ---NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred ---ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 1256788999999999987 477899999999999999865 456899998764
No 75
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.2e-35 Score=269.60 Aligned_cols=304 Identities=20% Similarity=0.237 Sum_probs=245.5
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
|+++++.+++ +.+++++.+. |.+.++||+||+.++++|++|++...|.... .+++...+++++|+|
T Consensus 1 m~a~~~~~~~-------~~~~~~~~~~----~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v 66 (334)
T PRK13771 1 MKAVILPGFK-------QGYRIEEVPD----PKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR---MKYPVILGHEVVGTV 66 (334)
T ss_pred CeeEEEcCCC-------CCcEEEeCCC----CCCCCCeEEEEEEEEeechhhHHHhcCCCCC---CCCCeeccccceEEE
Confidence 5677776543 3588888755 7899999999999999999999888764321 122333445899999
Q ss_pred EEeccCCCCCCCCCEEEec-----------------------------cCCeeeEEeecCCcccccCCCCCCCCcccccc
Q 042784 93 RVIRSKDSKYSDGDIVLRA-----------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLS 143 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~-----------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa 143 (356)
+.+|+++..+++||+|+.. .|+|++|+.++.+.++.+ |+++++.+ ++
T Consensus 67 ~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l---p~~~~~~~-~a 142 (334)
T PRK13771 67 EEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKV---PPNVSDEG-AV 142 (334)
T ss_pred EEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEEC---CCCCCHHH-hh
Confidence 9999999889999999932 478999999999887555 99999988 78
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhH
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 223 (356)
.+.+.+.+||+++... +++++++|+|+|++|.+|++++++|+..|++|+++++++++.+.++ ++ ++.++++. ++
T Consensus 143 ~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~-~~-~~~~~~~~---~~ 216 (334)
T PRK13771 143 IVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KY-ADYVIVGS---KF 216 (334)
T ss_pred cccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HH-HHHhcCch---hH
Confidence 9999999999999765 8999999999999999999999999999999999999999999997 77 76666654 45
Q ss_pred HHHHHHHCCCCceEEEECCchhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccch
Q 042784 224 DAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDR 303 (356)
Q Consensus 224 ~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (356)
.+.++++ +++|+++||+|+.....++++++++|+++.+|...... .........+.+++++.+... .
T Consensus 217 ~~~v~~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~-----~ 283 (334)
T PRK13771 217 SEEVKKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSP------TYSLRLGYIILKDIEIIGHIS-----A 283 (334)
T ss_pred HHHHHhc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCC------CcccCHHHHHhcccEEEEecC-----C
Confidence 5566654 36999999999988899999999999999999754311 000112223567777776532 1
Q ss_pred HHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 304 FADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 304 ~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
..+.++++++++.++.+++.++..|+++++++|++.+.++...||+|++.
T Consensus 284 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 284 TKRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred CHHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 24668889999999999888888999999999999999888889999865
No 76
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=4.9e-35 Score=271.15 Aligned_cols=308 Identities=17% Similarity=0.203 Sum_probs=248.1
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|++...+ +.++++++++ |.+++++|+||+.++++|+.|+....|... .+++...+++++|+|
T Consensus 1 m~a~~~~~~~-------~~~~~~~~~~----p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V 65 (363)
T cd08279 1 MRAAVLHEVG-------KPLEIEEVEL----DDPGPGEVLVRIAAAGLCHSDLHVVTGDLP----APLPAVLGHEGAGVV 65 (363)
T ss_pred CeEEEEecCC-------CCceEEEeeC----CCCCCCeEEEEEEEeecCcHHHHHhcCCCC----CCCCccccccceEEE
Confidence 5788888653 4578888866 778999999999999999999998876432 223333445899999
Q ss_pred EEeccCCCCCCCCCEEEe-------------------------------------------------ccCCeeeEEeecC
Q 042784 93 RVIRSKDSKYSDGDIVLR-------------------------------------------------AFLPVAEYSLLPC 123 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~-------------------------------------------------~~g~~a~~~~v~~ 123 (356)
+.+|++++.+++||+|+. ..|+|++|+.++.
T Consensus 66 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 145 (363)
T cd08279 66 EEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPE 145 (363)
T ss_pred EEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEecc
Confidence 999999999999999983 1488999999999
Q ss_pred CcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCChHHH
Q 042784 124 DLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCK-VVGSTGSDDNV 202 (356)
Q Consensus 124 ~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~-V~~~~~s~~~~ 202 (356)
+.++.+ |+++++++ ++.+++++++||.++.+.+++.++++|+|+| +|++|.+++++|+..|++ |++++.++++.
T Consensus 146 ~~~~~l---p~~~~~~~-aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~ 220 (363)
T cd08279 146 ASVVKI---DDDIPLDR-AALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKL 220 (363)
T ss_pred ccEEEC---CCCCChHH-eehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHH
Confidence 888555 99999998 7889999999999988888999999999996 499999999999999995 99999899999
Q ss_pred HHHHHHhCCCceeecCChhhHHHHHHHHC-CCCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchh
Q 042784 203 KLLKEEFGYDDAFNYNSEMSFDAALTKYF-PNGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVR 280 (356)
Q Consensus 203 ~~~~~~~g~~~v~~~~~~~~~~~~i~~~~-~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 280 (356)
+.++ ++|++++++++. .++...+++++ ++++|++||++++ ..+..++++++++|+++.+|...... ....
T Consensus 221 ~~~~-~~g~~~vv~~~~-~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~ 292 (363)
T cd08279 221 ELAR-RFGATHTVNASE-DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGE------TVSL 292 (363)
T ss_pred HHHH-HhCCeEEeCCCC-ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCc------cccc
Confidence 9987 899988888876 57777888776 4689999999995 58899999999999999998654210 1112
Q ss_pred hhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCCCcceEE
Q 042784 281 NLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSSNIGKVV 350 (356)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv 350 (356)
+...+..++..+.+...... ...+.+++++++++++.+.+ .+..+|+++++.+|++.+.+++..+.++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 293 PALELFLSEKRLQGSLYGSA--NPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred CHHHHhhcCcEEEEEEecCc--CcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 33344456666666544322 22467889999999999876 3667899999999999998887665544
No 77
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=4e-35 Score=271.80 Aligned_cols=297 Identities=14% Similarity=0.166 Sum_probs=239.9
Q ss_pred CCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEEEeccCCCCCCCCCEEE
Q 042784 30 DHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVL 109 (356)
Q Consensus 30 ~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~ 109 (356)
+.+++++.++ |.+++++|+||+.++++|+.|++.+.|... ...+...++|++|+|+++|++++.+++||+|+
T Consensus 11 ~~~~~~~~~~----p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~----~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv 82 (365)
T cd05279 11 KPLSIEEIEV----APPKAGEVRIKVVATGVCHTDLHVIDGKLP----TPLPVILGHEGAGIVESIGPGVTTLKPGDKVI 82 (365)
T ss_pred CCcEEEEeec----CCCCCCeEEEEEEEeeecchhHHHhcCCCC----CCCCcccccceeEEEEEeCCCcccCCCCCEEE
Confidence 5688988866 778999999999999999999998886432 12233444589999999999999999999998
Q ss_pred ec--------------------------------------------------cCCeeeEEeecCCcccccCCCCCCCCcc
Q 042784 110 RA--------------------------------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFP 139 (356)
Q Consensus 110 ~~--------------------------------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~ 139 (356)
.. .|+|++|+.++.+.++++ |++++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l---P~~~~~~ 159 (365)
T cd05279 83 PLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKI---DPDAPLE 159 (365)
T ss_pred EcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEEC---CCCCCHH
Confidence 31 268999999999888665 9999999
Q ss_pred ccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeecC
Q 042784 140 DYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYN 218 (356)
Q Consensus 140 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~ 218 (356)
+ ++.+.+++.+||+++.+.+++++|++|||+| +|++|++++++|+.+|+ .|+++++++++.+.++ ++|+++++++.
T Consensus 160 ~-a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~ 236 (365)
T cd05279 160 K-VCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAK-QLGATECINPR 236 (365)
T ss_pred H-hhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCCeecccc
Confidence 8 7889999999999988888999999999997 59999999999999999 5778887999999997 89999888876
Q ss_pred Chh--hHHHHHHHHCCCCceEEEECCch-hhHHHHHHhcc-cCCEEEEEecccccccccccccchhhhhhhhccceEEEE
Q 042784 219 SEM--SFDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVN-VHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEG 294 (356)
Q Consensus 219 ~~~--~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (356)
+ . ++.+.+++++++++|++||++|. ..+..++++++ ++|+++.+|...... ....+...+ .++.++.+
T Consensus 237 ~-~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~------~~~~~~~~~-~~~~~l~g 308 (365)
T cd05279 237 D-QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGT------EATLDPNDL-LTGRTIKG 308 (365)
T ss_pred c-ccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCC------ceeeCHHHH-hcCCeEEE
Confidence 5 4 67777888777789999999986 68889999999 999999998753110 111223333 56677777
Q ss_pred EecccccchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 295 FMIGSHMDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 295 ~~~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
....++. ..+.+.++++++.++.+.+ .+.++|+++++.+|++.+.+++. .|+++
T Consensus 309 ~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~~~~~ 364 (365)
T cd05279 309 TVFGGWK--SKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGES-IRTIL 364 (365)
T ss_pred EeccCCc--hHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCc-eeeee
Confidence 6554432 2356788999999998875 47778999999999999887664 36654
No 78
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=4.4e-35 Score=270.28 Aligned_cols=305 Identities=18% Similarity=0.158 Sum_probs=240.1
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCC--C----ccCCCccCcee
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDG--L----YFPQFNLNQVI 86 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~--~----~~~~~~~g~~~ 86 (356)
||++++.. ++.+++++.+. |++.+++|+||+.++++|++|+..+.|.... . ...+++...++
T Consensus 1 mka~~~~~--------~~~~~~~~~~~----p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~ 68 (350)
T cd08256 1 MRAVVCHG--------PQDYRLEEVPV----PRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGH 68 (350)
T ss_pred CeeEEEec--------CCceEEEECCC----CCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCc
Confidence 46777753 24688888755 7799999999999999999999988764210 0 00123333455
Q ss_pred eeeEEEEEeccCCC--CCCCCCEEEe-------------------------------ccCCeeeEEeecCCcccccCCCC
Q 042784 87 LAFGIARVIRSKDS--KYSDGDIVLR-------------------------------AFLPVAEYSLLPCDLLTRKLDPA 133 (356)
Q Consensus 87 ~~~G~v~~vg~~v~--~~~~Gd~V~~-------------------------------~~g~~a~~~~v~~~~~~~~i~~P 133 (356)
|++|+|+.+|++++ ++++||+|+. ..|+|++|+.++++..+.++ |
T Consensus 69 e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~l--P 146 (350)
T cd08256 69 EFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKV--P 146 (350)
T ss_pred ceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEEC--C
Confidence 99999999999999 8999999983 24899999999988544455 9
Q ss_pred CCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC
Q 042784 134 SGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYD 212 (356)
Q Consensus 134 ~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~ 212 (356)
+++++++ ++.+ .++.|+|+++ +.+++++|++|+|.| +|++|++++++|+.+|+ .|+++++++++...++ ++|++
T Consensus 147 ~~~~~~~-aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~ 221 (350)
T cd08256 147 DDIPPED-AILI-EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALAR-KFGAD 221 (350)
T ss_pred CCCCHHH-Hhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHH-HcCCc
Confidence 9999988 6666 8999999998 678999999999955 59999999999999998 5778888888888887 89998
Q ss_pred ceeecCChhhHHHHHHHHCC-CCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhh-hccc
Q 042784 213 DAFNYNSEMSFDAALTKYFP-NGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNM-IGKE 289 (356)
Q Consensus 213 ~v~~~~~~~~~~~~i~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~ 289 (356)
.++++.. .++.+.+.++++ .++|++||++|. ..+..++++++++|+++.+|...... ......+ ..++
T Consensus 222 ~v~~~~~-~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--------~~~~~~~~~~~~ 292 (350)
T cd08256 222 VVLNPPE-VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPV--------TVDWSIIGDRKE 292 (350)
T ss_pred EEecCCC-cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCC--------ccChhHhhcccc
Confidence 8888775 677778888764 489999999995 57888999999999999998643211 0111111 3566
Q ss_pred eEEEEEecccccchHHHHHHHHHHHHHcCCeeee--eeEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 290 VKMEGFMIGSHMDRFADFTVEMESYIKEGKIRSK--HVIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
+++.++.... ..++++++++.++.+++. +..+|+++++++|++.+.+++..+|+|+
T Consensus 293 ~~i~~~~~~~------~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 293 LDVLGSHLGP------YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred cEEEEeccCc------hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 7777665432 347788999999999873 6778999999999999999888889874
No 79
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=4.9e-35 Score=272.19 Aligned_cols=311 Identities=17% Similarity=0.125 Sum_probs=241.7
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCC-CCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSI-PDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
||+|++.. ++.++++++++ |.+ .++||+|||.++++|++|++...|... .+++...+++++|+
T Consensus 1 m~~~~~~~--------~~~~~~~~~~~----p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~----~~~p~~~g~e~~G~ 64 (375)
T cd08282 1 MKAVVYGG--------PGNVAVEDVPD----PKIEHPTDAIVRITTTAICGSDLHMYRGRTG----AEPGLVLGHEAMGE 64 (375)
T ss_pred CceEEEec--------CCceeEEeCCC----CCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC----CCCCceeccccEEE
Confidence 46676642 35788888766 564 799999999999999999999887543 22233444599999
Q ss_pred EEEeccCCCCCCCCCEEEec---------------------------------------cCCeeeEEeecCC--cccccC
Q 042784 92 ARVIRSKDSKYSDGDIVLRA---------------------------------------FLPVAEYSLLPCD--LLTRKL 130 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~---------------------------------------~g~~a~~~~v~~~--~~~~~i 130 (356)
|+++|+++..+++||+|+.. +|+|++|+.++.+ .++.+
T Consensus 65 V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~l- 143 (375)
T cd08282 65 VEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKL- 143 (375)
T ss_pred EEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEEC-
Confidence 99999999999999999830 2789999999975 56444
Q ss_pred CCCCCCCccc--cccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHH
Q 042784 131 DPASGIPFPD--YLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKE 207 (356)
Q Consensus 131 ~~P~~~s~~~--~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~ 207 (356)
|+++++++ .+++++.++.|||+++ ..+++++|++|+|.|+ |++|++++++|+..|+ +|++++.++++.++++
T Consensus 144 --P~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~- 218 (375)
T cd08282 144 --PDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVDHVPERLDLAE- 218 (375)
T ss_pred --CCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-
Confidence 99999983 1688899999999999 6788999999999775 9999999999999998 8999988999999998
Q ss_pred HhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchh------------hHHHHHHhcccCCEEEEEeccccccccccc
Q 042784 208 EFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGK------------MLEAVLNHVNVHARIILCGMISQYNKVWTE 275 (356)
Q Consensus 208 ~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 275 (356)
++|+. .+++++ .++.+.+.+++++++|+++||+|.. .+..++++++++|+++.+|...........
T Consensus 219 ~~g~~-~v~~~~-~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~ 296 (375)
T cd08282 219 SIGAI-PIDFSD-GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGD 296 (375)
T ss_pred HcCCe-EeccCc-ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCccccccc
Confidence 89984 667765 6677788887767899999999876 388999999999999988865421100000
Q ss_pred -----ccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCCCcce
Q 042784 276 -----RDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSSNIGK 348 (356)
Q Consensus 276 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gk 348 (356)
.....+...++.++..+.+... ..++.+.++++++.++.+.+ .++++|+++++++|++.+.+++ .+|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k 370 (375)
T cd08282 297 AAAKQGELSFDFGLLWAKGLSFGTGQA-----PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETK 370 (375)
T ss_pred ccccCccccccHHHHHhcCcEEEEecC-----CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceE
Confidence 0011233444556665554322 12356788899999999986 3778999999999999999888 889
Q ss_pred EEEEe
Q 042784 349 VVIQV 353 (356)
Q Consensus 349 vvi~~ 353 (356)
+|+++
T Consensus 371 vvv~~ 375 (375)
T cd08282 371 VVIKP 375 (375)
T ss_pred EEeCC
Confidence 99863
No 80
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=2.8e-35 Score=270.21 Aligned_cols=290 Identities=17% Similarity=0.152 Sum_probs=240.1
Q ss_pred CCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEEEeccCCCCCCCCCEEE
Q 042784 30 DHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVL 109 (356)
Q Consensus 30 ~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~ 109 (356)
..+++.+.++ |++.++||+||+.++++|++|++...|... ..+++...+++++|+|+.+|++++++++||+|+
T Consensus 10 ~~~~~~~~~~----p~~~~~evlirv~a~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 82 (337)
T cd05283 10 GKLEPFTFER----RPLGPDDVDIKITYCGVCHSDLHTLRNEWG---PTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVG 82 (337)
T ss_pred CCceEEeccC----CCCCCCeEEEEEEEecccchHHHHhcCCcC---CCCCCcccCcceeeEEEEECCCCcccCCCCEEE
Confidence 7889998866 789999999999999999999999887542 122333344599999999999999999999997
Q ss_pred e-------------------------------------ccCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhH
Q 042784 110 R-------------------------------------AFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAA 152 (356)
Q Consensus 110 ~-------------------------------------~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta 152 (356)
+ ..|+|++|+.++.+.++++ |+++++++ ++.+++.+.||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l---p~~~~~~~-aa~l~~~~~ta 158 (337)
T cd05283 83 VGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKI---PEGLDSAA-AAPLLCAGITV 158 (337)
T ss_pred EecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEEC---CCCCCHHH-hhhhhhHHHHH
Confidence 2 1488999999999888555 99999998 78999999999
Q ss_pred HHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCC
Q 042784 153 WVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFP 232 (356)
Q Consensus 153 ~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~ 232 (356)
|+++... .+++|++++|.| .|++|++++++|+..|++|+++++++++.+.++ ++|++.+++..+ .++... .+
T Consensus 159 ~~~~~~~-~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~-~~~~~~----~~ 230 (337)
T cd05283 159 YSPLKRN-GVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDAL-KLGADEFIATKD-PEAMKK----AA 230 (337)
T ss_pred HHHHHhc-CCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEecCcc-hhhhhh----cc
Confidence 9999754 589999999977 599999999999999999999999999999997 899988888765 333221 24
Q ss_pred CCceEEEECCchh-hHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHH
Q 042784 233 NGIDVYLDNVGGK-MLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEM 311 (356)
Q Consensus 233 ~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (356)
+++|+++||+|.. .+..++++++++|+++.+|..... ...+...++.+++++.+..... .+.++.+
T Consensus 231 ~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--------~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~ 297 (337)
T cd05283 231 GSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP--------LPVPPFPLIFGRKSVAGSLIGG-----RKETQEM 297 (337)
T ss_pred CCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC--------CccCHHHHhcCceEEEEecccC-----HHHHHHH
Confidence 6799999999987 589999999999999999875431 1223445567899998876653 3567888
Q ss_pred HHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 312 ESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 312 ~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
++++.++++.+.+ ..|+++++++||+.+.+++..||+|++
T Consensus 298 ~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 298 LDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 9999999998765 589999999999999999999999874
No 81
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=6.6e-35 Score=268.57 Aligned_cols=302 Identities=18% Similarity=0.147 Sum_probs=242.5
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCC-CCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSI-PDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
|++|+++.. +.+++++.++ |.| +++||+||+.++++|+.|.....|.+.. ..+..+| ++++|+
T Consensus 1 ~~a~~~~~~--------~~~~~~~~~~----p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g--~e~~G~ 64 (344)
T cd08284 1 MKAVVFKGP--------GDVRVEEVPI----PQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS--TPGFVLG--HEFVGE 64 (344)
T ss_pred CeeEEEecC--------CCceEEeccC----CCCCCCCeEEEEEEEeeccccchhhhcCCCCC--CCCcccc--cceEEE
Confidence 567877632 5688888866 666 4999999999999999999888764431 2234444 489999
Q ss_pred EEEeccCCCCCCCCCEEEec---------------------------------cCCeeeEEeecCC--cccccCCCCCCC
Q 042784 92 ARVIRSKDSKYSDGDIVLRA---------------------------------FLPVAEYSLLPCD--LLTRKLDPASGI 136 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~---------------------------------~g~~a~~~~v~~~--~~~~~i~~P~~~ 136 (356)
|+.+|++++.+++||+|+.. .|+|++|+.++.+ .++++ |+++
T Consensus 65 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~---p~~l 141 (344)
T cd08284 65 VVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKL---PDGL 141 (344)
T ss_pred EEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEEC---CCCC
Confidence 99999999999999999931 3889999999974 66444 9999
Q ss_pred CccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCcee
Q 042784 137 PFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAF 215 (356)
Q Consensus 137 s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~ 215 (356)
++++ +++++.+++|||+++. ..++.+|++|+|+| +|++|++++++|+.+|+ +|++++.++++.++++ ++|+. .+
T Consensus 142 ~~~~-a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~-~~ 216 (344)
T cd08284 142 SDEA-ALLLGDILPTGYFGAK-RAQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAA-ALGAE-PI 216 (344)
T ss_pred CHHH-hhhhcCchHHHHhhhH-hcCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HhCCe-EE
Confidence 9998 7899999999999996 47889999999997 59999999999999997 8999988888888888 89975 56
Q ss_pred ecCChhhHHHHHHHHCC-CCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEE
Q 042784 216 NYNSEMSFDAALTKYFP-NGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKME 293 (356)
Q Consensus 216 ~~~~~~~~~~~i~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (356)
+++. .++...+.++++ +++|++|||+|+ ..+..++++++++|+++.+|...... ........+.+++++.
T Consensus 217 ~~~~-~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~ 288 (344)
T cd08284 217 NFED-AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEE-------FPFPGLDAYNKNLTLR 288 (344)
T ss_pred ecCC-cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCC-------ccccHHHHhhcCcEEE
Confidence 6665 567777887764 589999999996 58889999999999999999765311 1123344567777776
Q ss_pred EEecccccchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 294 GFMIGSHMDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 294 ~~~~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
... ....+.++++++++.++.+.+ .+..++++++++++++.+.+++. +|+|++
T Consensus 289 ~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 289 FGR-----CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred Eec-----CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 431 123467888999999999876 36678999999999999988877 999985
No 82
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=5.2e-35 Score=269.14 Aligned_cols=308 Identities=19% Similarity=0.210 Sum_probs=244.9
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|++... +.+.+++.++ |+++++||+||+.++++|+.|+..+.|.. ....+..+| .+++|+|
T Consensus 1 ~~a~~~~~~--------~~l~~~~~~~----~~l~~~~v~v~v~~~~~n~~d~~~~~~~~--~~~~~~~~g--~~~~G~V 64 (343)
T cd08236 1 MKALVLTGP--------GDLRYEDIPK----PEPGPGEVLVKVKACGICGSDIPRYLGTG--AYHPPLVLG--HEFSGTV 64 (343)
T ss_pred CeeEEEecC--------CceeEEecCC----CCCCCCeEEEEEEEEEECccchHhhcCCC--CCCCCcccC--cceEEEE
Confidence 578888754 3578887765 67999999999999999999999887643 112334444 4899999
Q ss_pred EEeccCCCCCCCCCEEEe-----------------------------ccCCeeeEEeecCCcccccCCCCCCCCcccccc
Q 042784 93 RVIRSKDSKYSDGDIVLR-----------------------------AFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLS 143 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~-----------------------------~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa 143 (356)
+.+|+++..+++||+|+. ..|+|++|+.++.+.++.+ |+++++++ +|
T Consensus 65 ~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l---P~~~~~~~-aa 140 (343)
T cd08236 65 EEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKI---PDHVDYEE-AA 140 (343)
T ss_pred EEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEEC---cCCCCHHH-HH
Confidence 999999999999999993 1489999999999888555 99999988 56
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHhCCCceeecCChhh
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCK-VVGSTGSDDNVKLLKEEFGYDDAFNYNSEMS 222 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~-V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~ 222 (356)
.+ ..+++||+++. ..+++++++|+|+| +|.+|.+++++|+.+|++ |+++++++++.+.++ ++|+..++++++ ..
T Consensus 141 ~~-~~~~ta~~~l~-~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~-~~g~~~~~~~~~-~~ 215 (343)
T cd08236 141 MI-EPAAVALHAVR-LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINPKE-ED 215 (343)
T ss_pred hc-chHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEecCcc-cc
Confidence 66 67899999996 78899999999997 599999999999999996 999998999999987 899988898876 44
Q ss_pred HHHHHHHHCC-CCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccc
Q 042784 223 FDAALTKYFP-NGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSH 300 (356)
Q Consensus 223 ~~~~i~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (356)
.+.+.+..+ .++|++|||+|. ..+..++++++++|+++.+|..... .......+..++.+++++.++.....
T Consensus 216 -~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (343)
T cd08236 216 -VEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD-----VTLSEEAFEKILRKELTIQGSWNSYS 289 (343)
T ss_pred -HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC-----cccccCCHHHHHhcCcEEEEEeeccc
Confidence 666766664 479999999976 5788999999999999999865431 11111233445677888888765433
Q ss_pred cchHHHHHHHHHHHHHcCCee--eeeeEEeChhhHHHHHHHHHc-CCCcceEEE
Q 042784 301 MDRFADFTVEMESYIKEGKIR--SKHVIYYGVESFLESLGSLFS-SSNIGKVVI 351 (356)
Q Consensus 301 ~~~~~~~l~~~~~~~~~g~i~--~~~~~~~~~~~~~~a~~~~~~-~~~~gkvvi 351 (356)
.....+.++++++++.++.+. +.+...+++++++++++.+.+ +...||+|+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 290 APFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred cccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 223346678889999999875 445678999999999999998 666778874
No 83
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.3e-34 Score=265.61 Aligned_cols=312 Identities=26% Similarity=0.338 Sum_probs=257.2
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|+++.+ +..+.+++++.+. |.+.++|++||+.++++|++|+....|........|..+| +++.|+|
T Consensus 1 ~~a~~~~~~-----~~~~~~~~~~~~~----~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g--~e~~G~v 69 (336)
T cd08276 1 MKAWRLSGG-----GGLDNLKLVEEPV----PEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPL--SDGAGEV 69 (336)
T ss_pred CeEEEEecc-----CCCcceEEEeccC----CCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccc--cceeEEE
Confidence 678888754 3446788877654 5689999999999999999999988765433222233444 5888999
Q ss_pred EEeccCCCCCCCCCEEEec-----------------------cCCeeeEEeecCCcccccCCCCCCCCccccccccCchh
Q 042784 93 RVIRSKDSKYSDGDIVLRA-----------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPG 149 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~-----------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~ 149 (356)
+.+|++++++++||+|+.. .|+|++|+.++.+.++.+ |+++++.+ ++.+...+
T Consensus 70 ~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l---p~~~~~~~-a~~~~~~~ 145 (336)
T cd08276 70 VAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRA---PDHLSFEE-AATLPCAG 145 (336)
T ss_pred EEeCCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEEC---CCCCCHHH-hhhhhHHH
Confidence 9999999999999999932 478999999999887554 99999988 78899999
Q ss_pred hhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHH
Q 042784 150 FAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTK 229 (356)
Q Consensus 150 ~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~ 229 (356)
++||+++...+++++|++|+|+| +|++|++++++++..|++|++++.++++.+.++ ++|.+.++++....++.+.+++
T Consensus 146 ~~a~~~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~ 223 (336)
T cd08276 146 LTAWNALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAK-ALGADHVINYRTTPDWGEEVLK 223 (336)
T ss_pred HHHHHHHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEcCCcccCHHHHHHH
Confidence 99999998788899999999996 699999999999999999999999999999998 7898888887642457777888
Q ss_pred HCC-CCceEEEECCchhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHH
Q 042784 230 YFP-NGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFT 308 (356)
Q Consensus 230 ~~~-~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 308 (356)
.++ +++|.++|+++......++++++++|+++.+|...... ........+.+++++.+..... .+.+
T Consensus 224 ~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 291 (336)
T cd08276 224 LTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGFE-------APVLLLPLLTKGATLRGIAVGS-----RAQF 291 (336)
T ss_pred HcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCCc-------cCcCHHHHhhcceEEEEEecCc-----HHHH
Confidence 775 58999999999888899999999999999998765421 1123455678899998877653 3567
Q ss_pred HHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 309 VEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 309 ~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
+++++++.++.+.+.+...+++++++++++.+.+++..+|+|+++
T Consensus 292 ~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 292 EAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred HHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 888899999988877777899999999999999888889999863
No 84
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=8.6e-35 Score=267.91 Aligned_cols=305 Identities=18% Similarity=0.167 Sum_probs=243.7
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCC-CCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSI-PDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
||++++.+. +.+++++.++ |+| .++||+|||.++++|++|+....|..... .++..+| +|++|+
T Consensus 1 m~a~~~~~~--------~~~~~~~~~~----p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~-~~~~~~g--~e~~G~ 65 (345)
T cd08286 1 MKALVYHGP--------GKISWEDRPK----PTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV-TPGRILG--HEGVGV 65 (345)
T ss_pred CceEEEecC--------CceeEEecCC----CCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC-CCCceec--ccceEE
Confidence 567777643 3588888755 565 79999999999999999999988754321 2233444 589999
Q ss_pred EEEeccCCCCCCCCCEEEec------------------------------cCCeeeEEeecCC--cccccCCCCCCCCcc
Q 042784 92 ARVIRSKDSKYSDGDIVLRA------------------------------FLPVAEYSLLPCD--LLTRKLDPASGIPFP 139 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~------------------------------~g~~a~~~~v~~~--~~~~~i~~P~~~s~~ 139 (356)
|+.+|++++++++||+|+.. .|+|++|+.++.+ .++. + |++++.+
T Consensus 66 V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~-l--p~~~~~~ 142 (345)
T cd08286 66 VEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYK-L--PEGVDEE 142 (345)
T ss_pred EEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEE-C--CCCCCHH
Confidence 99999999999999999831 1789999999987 5644 4 9999998
Q ss_pred ccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHhCCCceeecC
Q 042784 140 DYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKG-CKVVGSTGSDDNVKLLKEEFGYDDAFNYN 218 (356)
Q Consensus 140 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G-~~V~~~~~s~~~~~~~~~~~g~~~v~~~~ 218 (356)
+ ++.++..++|||.++...+++.+|++|+|+|+ |++|.+++|+|+..| .+|++++.++++...++ ++|++.++++.
T Consensus 143 ~-aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~ 219 (345)
T cd08286 143 A-AVMLSDILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAK-KLGATHTVNSA 219 (345)
T ss_pred H-hhhccchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCceeccc
Confidence 8 78999999999998777788999999999885 999999999999999 69999888888888888 89999899887
Q ss_pred ChhhHHHHHHHHCC-CCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEe
Q 042784 219 SEMSFDAALTKYFP-NGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFM 296 (356)
Q Consensus 219 ~~~~~~~~i~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (356)
. .++.+.+.++++ +++|++|||+|. ..+..++++++++|+++.+|..... ...+...++.+++++.+..
T Consensus 220 ~-~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~--------~~~~~~~~~~~~~~~~~~~ 290 (345)
T cd08286 220 K-GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKP--------VDLHLEKLWIKNITITTGL 290 (345)
T ss_pred c-ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCC--------CCcCHHHHhhcCcEEEeec
Confidence 6 567777777764 589999999986 4788899999999999999864321 1224445577888887643
Q ss_pred cccccchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCC--CcceEEEEe
Q 042784 297 IGSHMDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSS--NIGKVVIQV 353 (356)
Q Consensus 297 ~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~--~~gkvvi~~ 353 (356)
.. .+.+++++++++++.+.+ .++++|+++++++|++.+.... ...|+||++
T Consensus 291 ~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 291 VD------TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred Cc------hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 22 145778889999998875 3567899999999999998764 344999864
No 85
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=7.6e-35 Score=267.40 Aligned_cols=308 Identities=22% Similarity=0.267 Sum_probs=247.9
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||++++.++. .+. +.+.+.+ .|.+.+++|+||+.++++|+.|.....|...... +++...+.+++|+|
T Consensus 1 ~~~~~~~~~~-----~~~-~~~~~~~----~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~--~~~~~~g~~~~G~v 68 (338)
T cd08254 1 MKAWRFHKGS-----KGL-LVLEEVP----VPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLT--KLPLTLGHEIAGTV 68 (338)
T ss_pred CeeEEEecCC-----CCc-eEEeccC----CCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccC--CCCEeccccccEEE
Confidence 5777777653 223 5666553 3788999999999999999999998887543222 22333445899999
Q ss_pred EEeccCCCCCCCCCEEEe-------------------c----------cCCeeeEEeecCCcccccCCCCCCCCcccccc
Q 042784 93 RVIRSKDSKYSDGDIVLR-------------------A----------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLS 143 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~-------------------~----------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa 143 (356)
+.+|++++.+++||+|+. + .|+|++|+.++.+.++.+ |++++.++ ++
T Consensus 69 ~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l---p~~~~~~~-a~ 144 (338)
T cd08254 69 VEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPV---PDGVPFAQ-AA 144 (338)
T ss_pred EEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEEC---CCCCCHHH-hh
Confidence 999999999999999982 0 489999999999887555 99999998 78
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhH
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 223 (356)
+++.++.|||+++....+++++++|||.| +|++|++++++|+..|++|++++.++++.+.++ ++|.+.++++.+ ..+
T Consensus 145 ~~~~~~~ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~-~~g~~~~~~~~~-~~~ 221 (338)
T cd08254 145 VATDAVLTPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-ELGADEVLNSLD-DSP 221 (338)
T ss_pred hhcchHHHHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcCCC-cCH
Confidence 99999999999998888899999999986 599999999999999999999999999999997 899988888765 455
Q ss_pred HHHHHHHCCCCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccc
Q 042784 224 DAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMD 302 (356)
Q Consensus 224 ~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (356)
.+.++...++++|+++||+|. ..+..++++++++|+++.+|..... ...+...++.++.++.+....
T Consensus 222 ~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~---- 289 (338)
T cd08254 222 KDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDK--------LTVDLSDLIARELRIIGSFGG---- 289 (338)
T ss_pred HHHHHHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCC--------CccCHHHHhhCccEEEEeccC----
Confidence 555633335689999999985 5888999999999999999875431 112334556777777765432
Q ss_pred hHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 303 RFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 303 ~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
..+.++.++++++++.+.+. ...++++++.++++.+.+++..||+|+++
T Consensus 290 -~~~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 290 -TPEDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred -CHHHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 23678889999999999876 56899999999999999999999999864
No 86
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=8.1e-35 Score=267.86 Aligned_cols=304 Identities=19% Similarity=0.161 Sum_probs=242.2
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|+++.. +.+.+++.++ |.+.+++|+|||.++++|+.|+....|... ....+..+| ++++|+|
T Consensus 1 ~~~~~~~~~--------~~~~~~~~~~----~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g--~~~~G~V 65 (343)
T cd08235 1 MKAAVLHGP--------NDVRLEEVPV----PEPGPGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILG--HEIAGEI 65 (343)
T ss_pred CeEEEEecC--------CceEEEEccC----CCCCCCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccc--cceEEEE
Confidence 478888753 3578887755 668999999999999999999998876432 112233344 5899999
Q ss_pred EEeccCCCCCCCCCEEEec-----------------------------cCCeeeEEeecCCc-----ccccCCCCCCCCc
Q 042784 93 RVIRSKDSKYSDGDIVLRA-----------------------------FLPVAEYSLLPCDL-----LTRKLDPASGIPF 138 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~-----------------------------~g~~a~~~~v~~~~-----~~~~i~~P~~~s~ 138 (356)
+.+|++++.+++||+|+.. .|+|++|+.++.+. ++++ |+++++
T Consensus 66 ~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~l---P~~~~~ 142 (343)
T cd08235 66 VEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKL---PDNVSF 142 (343)
T ss_pred EeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEEC---CCCCCH
Confidence 9999999999999999931 38999999999987 7554 999999
Q ss_pred cccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHhCCCceeec
Q 042784 139 PDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCK-VVGSTGSDDNVKLLKEEFGYDDAFNY 217 (356)
Q Consensus 139 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~-V~~~~~s~~~~~~~~~~~g~~~v~~~ 217 (356)
++ ++.+ ..+.+||+++. ..++++|++|+|+| +|++|.+++++|+..|++ |++++.++++.+.++ ++|.++++++
T Consensus 143 ~~-aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~-~~g~~~~~~~ 217 (343)
T cd08235 143 EE-AALV-EPLACCINAQR-KAGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK-KLGADYTIDA 217 (343)
T ss_pred HH-HHhh-hHHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEecC
Confidence 98 5554 78899999996 45899999999997 599999999999999998 999988999999997 8999888888
Q ss_pred CChhhHHHHHHHHCC-CCceEEEECCchh-hHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEE
Q 042784 218 NSEMSFDAALTKYFP-NGIDVYLDNVGGK-MLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGF 295 (356)
Q Consensus 218 ~~~~~~~~~i~~~~~-~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (356)
++ .++.+.++++++ +++|+++||+++. .+..++++++++|+++.+|...... ....+......+++.+.+.
T Consensus 218 ~~-~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~------~~~~~~~~~~~~~~~l~~~ 290 (343)
T cd08235 218 AE-EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGS------TVNIDPNLIHYREITITGS 290 (343)
T ss_pred Cc-cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCC------CcccCHHHHhhCceEEEEE
Confidence 87 678778887764 5799999999964 8889999999999999988644311 1111223445566666654
Q ss_pred ecccccchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 296 MIGSHMDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 296 ~~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
... ..+.+++++++++++.+.+ .+..+|+++++.++++.+.+++ .+|+|+.
T Consensus 291 ~~~-----~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 291 YAA-----SPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred ecC-----ChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 432 2356788899999999863 4566899999999999999988 8899873
No 87
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=7e-35 Score=268.23 Aligned_cols=295 Identities=16% Similarity=0.166 Sum_probs=233.7
Q ss_pred CCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEEEeccCCCCCCCCCEEE
Q 042784 30 DHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVL 109 (356)
Q Consensus 30 ~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~ 109 (356)
..+++++.+. |.+.++||+|||.++++|+.|.+...+...+.....++...+++++|+|+.+|+++.++++||+|+
T Consensus 8 ~~~~~~~~~~----~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 83 (343)
T cd05285 8 GDLRLEERPI----PEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVA 83 (343)
T ss_pred CceeEEECCC----CCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEE
Confidence 6788888755 678999999999999999999987643222222222333344589999999999999999999998
Q ss_pred e------------------------------ccCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHh
Q 042784 110 R------------------------------AFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVL 159 (356)
Q Consensus 110 ~------------------------------~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~ 159 (356)
. ..|+|++|++++++.++++ |+++++++ ++.+ .++.+|++++ ..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l---P~~~~~~~-aa~~-~~~~~a~~~~-~~ 157 (343)
T cd05285 84 IEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKL---PDNVSLEE-GALV-EPLSVGVHAC-RR 157 (343)
T ss_pred EccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEEC---cCCCCHHH-hhhh-hHHHHHHHHH-Hh
Confidence 3 1489999999999887555 99999998 5555 6888999997 68
Q ss_pred CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHhCCCceeecCChhh---HHHHHHHHCC-CC
Q 042784 160 GQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCK-VVGSTGSDDNVKLLKEEFGYDDAFNYNSEMS---FDAALTKYFP-NG 234 (356)
Q Consensus 160 ~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~-V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~---~~~~i~~~~~-~~ 234 (356)
+++++|++|+|+|+ |++|++++++|+.+|++ |+++++++++.+.++ ++|++.++++++ .+ +.+.+.+.++ ++
T Consensus 158 ~~~~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~ 234 (343)
T cd05285 158 AGVRPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAK-ELGATHTVNVRT-EDTPESAEKIAELLGGKG 234 (343)
T ss_pred cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEecccc-ccchhHHHHHHHHhCCCC
Confidence 99999999999875 99999999999999996 999988899999998 899999998875 34 3677777664 57
Q ss_pred ceEEEECCchh-hHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHH
Q 042784 235 IDVYLDNVGGK-MLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMES 313 (356)
Q Consensus 235 ~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 313 (356)
+|++|||+|.. .+...+++++++|+++.+|..... ...+......+++.+.+..... +.++++++
T Consensus 235 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 300 (343)
T cd05285 235 PDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE--------VTLPLSAASLREIDIRGVFRYA------NTYPTAIE 300 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC--------CccCHHHHhhCCcEEEEeccCh------HHHHHHHH
Confidence 99999999986 889999999999999999864331 1112224455666666553221 56788899
Q ss_pred HHHcCCee--eeeeEEeChhhHHHHHHHHHcCC-CcceEEE
Q 042784 314 YIKEGKIR--SKHVIYYGVESFLESLGSLFSSS-NIGKVVI 351 (356)
Q Consensus 314 ~~~~g~i~--~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvi 351 (356)
++.++.+. +.+..+|+++++.+|++.+.+++ ..+|++|
T Consensus 301 ~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 301 LLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred HHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 99999865 44667899999999999998774 5689988
No 88
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.7e-34 Score=264.38 Aligned_cols=303 Identities=23% Similarity=0.221 Sum_probs=244.6
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
|+++++.+. ++.+.+++.+. |.+.+++|+|+++++++|+.|++...|.... ...+..+| ++++|+|
T Consensus 1 m~a~~~~~~-------~~~~~~~~~~~----p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g--~e~~G~v 66 (332)
T cd08259 1 MKAAILHKP-------NKPLQIEEVPD----PEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR-GKYPLILG--HEIVGTV 66 (332)
T ss_pred CeEEEEecC-------CCceEEEEccC----CCCCCCeEEEEEEEEecchhhhHHhcCCCCC-CCCCeecc--ccceEEE
Confidence 567777742 26788887754 7789999999999999999999988864332 12233444 5899999
Q ss_pred EEeccCCCCCCCCCEEEec-----------------------------cCCeeeEEeecCCcccccCCCCCCCCcccccc
Q 042784 93 RVIRSKDSKYSDGDIVLRA-----------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLS 143 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~-----------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa 143 (356)
+.+|++++.+++||+|+.. .|+|++|+.++.+.++.+ |+++++++ ++
T Consensus 67 ~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i---p~~~~~~~-~~ 142 (332)
T cd08259 67 EEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKL---PDNVSDES-AA 142 (332)
T ss_pred EEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEEC---CCCCCHHH-Hh
Confidence 9999999999999999932 478999999999887554 99999998 78
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhH
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 223 (356)
.+++++.+||+++.. +++.++++++|+|++|++|++++++++..|++|+++++++++.+.++ ++|...+++.. . +
T Consensus 143 ~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~--~-~ 217 (332)
T cd08259 143 LAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-ELGADYVIDGS--K-F 217 (332)
T ss_pred hhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCcEEEecH--H-H
Confidence 999999999999986 88999999999999999999999999999999999998888988887 78887777654 2 6
Q ss_pred HHHHHHHCCCCceEEEECCchhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccch
Q 042784 224 DAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDR 303 (356)
Q Consensus 224 ~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (356)
.+.+.+.. ++|++++|+|......++++++++|+++.+|...... . .........++..+.+... .
T Consensus 218 ~~~~~~~~--~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~------~-~~~~~~~~~~~~~~~~~~~-----~ 283 (332)
T cd08259 218 SEDVKKLG--GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDP------A-PLRPGLLILKEIRIIGSIS-----A 283 (332)
T ss_pred HHHHHhcc--CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCC------c-CCCHHHHHhCCcEEEEecC-----C
Confidence 66666553 6999999999988899999999999999998754311 0 0111122245666655431 1
Q ss_pred HHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 304 FADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 304 ~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
....++++++++.++.+++.++.+|+++++++|++.+.+++..||+|++
T Consensus 284 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 284 TKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred CHHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 2466788999999999988888899999999999999999888999874
No 89
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=1.8e-34 Score=267.47 Aligned_cols=297 Identities=18% Similarity=0.186 Sum_probs=230.1
Q ss_pred CCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEEEeccCCCCCCCCCEEE
Q 042784 30 DHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVL 109 (356)
Q Consensus 30 ~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~ 109 (356)
+.+++++.+. |.+.++||+||+.++++|++|.+...|...+.+...++...++|++|+|+++|+++.+|++||+|+
T Consensus 27 ~~l~~~~~~~----p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 102 (364)
T PLN02702 27 NTLKIQPFKL----PPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVA 102 (364)
T ss_pred CceEEEeccC----CCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEE
Confidence 5678877654 678999999999999999999998876332322222333444599999999999999999999998
Q ss_pred ec------------------------------cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHh
Q 042784 110 RA------------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVL 159 (356)
Q Consensus 110 ~~------------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~ 159 (356)
.. .|+|++|+.++.+.++++ |+++++++ ++ +..++.++++++ ..
T Consensus 103 ~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~---P~~l~~~~-aa-~~~~~~~a~~~~-~~ 176 (364)
T PLN02702 103 LEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL---PENVSLEE-GA-MCEPLSVGVHAC-RR 176 (364)
T ss_pred EcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEEC---CCCCCHHH-Hh-hhhHHHHHHHHH-Hh
Confidence 31 489999999999887554 99999988 44 334555688887 57
Q ss_pred CCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeecCC-hhhHHHHHHHH---CCCC
Q 042784 160 GQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNS-EMSFDAALTKY---FPNG 234 (356)
Q Consensus 160 ~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~~i~~~---~~~~ 234 (356)
.++.+|++|+|+| +|++|++++++|+..|+ .|++++.++++.+.++ ++|++.++++.. ..++.+.+.++ ++++
T Consensus 177 ~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (364)
T PLN02702 177 ANIGPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAK-QLGADEIVLVSTNIEDVESEVEEIQKAMGGG 254 (364)
T ss_pred cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEecCcccccHHHHHHHHhhhcCCC
Confidence 8899999999997 59999999999999999 5788888888888888 899988877642 14566666554 3457
Q ss_pred ceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHH
Q 042784 235 IDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMES 313 (356)
Q Consensus 235 ~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 313 (356)
+|++|||+|. ..+..++++++++|+++.+|..... ..........+++++.++.... ..++.+++
T Consensus 255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--------~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~ 320 (364)
T PLN02702 255 IDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNE--------MTVPLTPAAAREVDVVGVFRYR------NTWPLCLE 320 (364)
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC--------CcccHHHHHhCccEEEEeccCh------HHHHHHHH
Confidence 9999999994 6889999999999999999865321 1112334566778887765321 35678899
Q ss_pred HHHcCCee--eeeeEEeCh--hhHHHHHHHHHcCCCcceEEEE
Q 042784 314 YIKEGKIR--SKHVIYYGV--ESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 314 ~~~~g~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
+++++.+. +.++++|++ +++++|++.+.+++..+|+|++
T Consensus 321 ~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 321 FLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred HHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 99999875 446667555 8999999999988888999985
No 90
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=2.8e-34 Score=261.28 Aligned_cols=315 Identities=23% Similarity=0.302 Sum_probs=254.0
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||++++... +.++.+++.+.+. |.+.+++|+||+.++++|+.|+....|........|..+| ++++|+|
T Consensus 1 ~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g--~e~~G~v 69 (323)
T cd05276 1 MKAIVIKEP-----GGPEVLELGEVPK----PAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILG--LEVAGVV 69 (323)
T ss_pred CeEEEEecC-----CCcccceEEecCC----CCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCccc--ceeEEEE
Confidence 577777653 3456788877654 5688999999999999999999888764332222233444 5899999
Q ss_pred EEeccCCCCCCCCCEEEec--cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEE
Q 042784 93 RVIRSKDSKYSDGDIVLRA--FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFV 170 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~--~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV 170 (356)
+.+|+++..+++||+|+.. .|+|++|+.++.+.++.. |+++++++ +++++..+.++++++.+.+++.++++|+|
T Consensus 70 ~~vg~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~---p~~~~~~~-~~~l~~~~~~a~~~~~~~~~~~~~~~vlv 145 (323)
T cd05276 70 VAVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPV---PEGLSLVE-AAALPEVFFTAWQNLFQLGGLKAGETVLI 145 (323)
T ss_pred EeeCCCCCCCCCCCEEEEecCCCceeEEEEcCHHHhccC---CCCCCHHH-HhhchhHHHHHHHHHHHhcCCCCCCEEEE
Confidence 9999999999999999931 289999999999887554 99999988 78999999999999988888999999999
Q ss_pred EcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHC-CCCceEEEECCchhhHHH
Q 042784 171 SAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYF-PNGIDVYLDNVGGKMLEA 249 (356)
Q Consensus 171 ~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~-~~~~d~vld~~g~~~~~~ 249 (356)
+|++|++|++++++++..|++|+++++++++.+.++ .+|++.++++.. .++.+.+.+.. ++++|+++|++|+..+..
T Consensus 146 ~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~ 223 (323)
T cd05276 146 HGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-ALGADVAINYRT-EDFAEEVKEATGGRGVDVILDMVGGDYLAR 223 (323)
T ss_pred EcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCc-hhHHHHHHHHhCCCCeEEEEECCchHHHHH
Confidence 999999999999999999999999998989999997 899888888766 56777777765 458999999999988888
Q ss_pred HHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccccc-----chHHHHHHHHHHHHHcCCeeeee
Q 042784 250 VLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM-----DRFADFTVEMESYIKEGKIRSKH 324 (356)
Q Consensus 250 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~g~i~~~~ 324 (356)
++++++++|+++.+|...... .......++.+++++.+....... ......+.++++++.++.+.+..
T Consensus 224 ~~~~~~~~g~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (323)
T cd05276 224 NLRALAPDGRLVLIGLLGGAK-------AELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVI 296 (323)
T ss_pred HHHhhccCCEEEEEecCCCCC-------CCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCc
Confidence 999999999999998754311 112333345688888887655431 12235577888999999998777
Q ss_pred eEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 325 VIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 325 ~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
+..|++++++++++.+.++...||+|+
T Consensus 297 ~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 297 DKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred ceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 789999999999999998888888874
No 91
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=3.3e-34 Score=261.17 Aligned_cols=316 Identities=22% Similarity=0.312 Sum_probs=255.3
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||++.+... +.++.+.+.+.+. |.+.+++|+|++.++++|+.|.....|........|..+| ++++|+|
T Consensus 1 ~~~~~~~~~-----~~~~~~~~~~~~~----~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g--~e~~G~v 69 (325)
T cd08253 1 MRAIRYHEF-----GAPDVLRLGDLPV----PTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPG--SDGAGVV 69 (325)
T ss_pred CceEEEccc-----CCcccceeeecCC----CCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecc--cceEEEE
Confidence 456666643 2345688877744 7789999999999999999999888764433223344445 4889999
Q ss_pred EEeccCCCCCCCCCEEEec-------cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCC
Q 042784 93 RVIRSKDSKYSDGDIVLRA-------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSG 165 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~-------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g 165 (356)
+.+|+++.++++||+|+.. .|++++|+.++.+.++.. |+++++++ ++.+++++.+||+++...+++.+|
T Consensus 70 ~~~g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~i---p~~~~~~~-aa~~~~~~~~a~~~l~~~~~~~~g 145 (325)
T cd08253 70 EAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPL---PDGVSFEQ-GAALGIPALTAYRALFHRAGAKAG 145 (325)
T ss_pred EeeCCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHHcEeC---CCCCCHHH-HhhhhhHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999932 589999999999877554 99999998 789999999999999887899999
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHC-CCCceEEEECCch
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYF-PNGIDVYLDNVGG 244 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~-~~~~d~vld~~g~ 244 (356)
++|+|+|++|++|++++++++..|++|+++++++++.+.++ ++|++.++++.. .++.+.+.+.+ ++++|+++||+|.
T Consensus 146 ~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~~~ 223 (325)
T cd08253 146 ETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGADAVFNYRA-EDLADRILAATAGQGVDVIIEVLAN 223 (325)
T ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCC-cCHHHHHHHHcCCCceEEEEECCch
Confidence 99999999999999999999999999999999999999997 799988888766 56777777766 4589999999999
Q ss_pred hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccccc-chHHHHHHHHHHHHHcCCeeee
Q 042784 245 KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM-DRFADFTVEMESYIKEGKIRSK 323 (356)
Q Consensus 245 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~g~i~~~ 323 (356)
......+++++++|+++.+|..... .......++.++.++.+....... ....+.++.+.+++.++.+++.
T Consensus 224 ~~~~~~~~~l~~~g~~v~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 295 (325)
T cd08253 224 VNLAKDLDVLAPGGRIVVYGSGGLR--------GTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPV 295 (325)
T ss_pred HHHHHHHHhhCCCCEEEEEeecCCc--------CCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCc
Confidence 8888899999999999999875310 111223345677777766544322 2344667888889999999887
Q ss_pred eeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 324 HVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 324 ~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
++.+|++++++++++.+.++...||+++++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 296 IAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred cccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 778999999999999999988899999863
No 92
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=4.5e-34 Score=260.81 Aligned_cols=312 Identities=19% Similarity=0.241 Sum_probs=245.3
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|++..+ ++++.+++++.+. |.++++||+||+.++++|+.|.....|........+..+| ++++|+|
T Consensus 1 ~~a~~~~~~-----~~~~~~~~~~~~~----p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g--~e~~G~V 69 (324)
T cd08288 1 FKALVLEKD-----DGGTSAELRELDE----SDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPG--IDLAGTV 69 (324)
T ss_pred CeeEEEecc-----CCCcceEEEECCC----CCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccc--cceEEEE
Confidence 578888854 3346889998866 7789999999999999999999888764321112234444 4888999
Q ss_pred EEeccCCCCCCCCCEEEec--------cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHH---HhCC
Q 042784 93 RVIRSKDSKYSDGDIVLRA--------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIE---VLGQ 161 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~--------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~---~~~~ 161 (356)
+. ++++.+++||+|+.. .|+|++|+.++.+.++.+ |+++++++ ++.++..+++|+.++. ....
T Consensus 70 ~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~l---p~~~~~~~-~~~~~~~~~ta~~~~~~~~~~~~ 143 (324)
T cd08288 70 VE--SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPL---PEGLSARQ-AMAIGTAGFTAMLCVMALEDHGV 143 (324)
T ss_pred Ee--CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHHeeeC---CCCCCHHH-HhhhhhHHHHHHHHHHHHhhcCc
Confidence 88 777889999999931 589999999999887554 99999998 7899999999987764 2333
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEEC
Q 042784 162 PKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDN 241 (356)
Q Consensus 162 ~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~ 241 (356)
.+++++|+|+|++|++|.+++++|+.+|++|++++.++++.+.++ ++|+++++++++ +...++.++++++|.++|+
T Consensus 144 ~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~d~ 219 (324)
T cd08288 144 TPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLR-SLGASEIIDRAE---LSEPGRPLQKERWAGAVDT 219 (324)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCEEEEcch---hhHhhhhhccCcccEEEEC
Confidence 336789999999999999999999999999999998999999997 899998898864 3335566665579999999
Q ss_pred CchhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccccc-chHHHHHHHHHHHHHcCCe
Q 042784 242 VGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM-DRFADFTVEMESYIKEGKI 320 (356)
Q Consensus 242 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~g~i 320 (356)
+++..+..++..++.+|+++.+|...... ...+...++.+++++.+....... ....+.++.+.+++.++.+
T Consensus 220 ~~~~~~~~~~~~~~~~g~~~~~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (324)
T cd08288 220 VGGHTLANVLAQTRYGGAVAACGLAGGAD-------LPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALL 292 (324)
T ss_pred CcHHHHHHHHHHhcCCCEEEEEEecCCCC-------CCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCc
Confidence 99877778888999999999998753210 112333445788888887543221 2345678888889999988
Q ss_pred eeeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 321 RSKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 321 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
.+ +...++++++++|++.+.+++..+|+|+++
T Consensus 293 ~~-i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 293 EA-LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred cc-cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 76 467899999999999999999999999864
No 93
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=9.4e-34 Score=260.20 Aligned_cols=312 Identities=21% Similarity=0.263 Sum_probs=252.8
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||++++... +.++.+++.+.+. |.+.+++|+||+.++++|+.|++...|........+..+|+ |++|+|
T Consensus 1 ~~a~~~~~~-----~~~~~~~~~~~~~----~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~--e~~G~v 69 (342)
T cd08266 1 MKAVVIRGH-----GGPEVLEYGDLPE----PEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGS--DGAGVV 69 (342)
T ss_pred CeEEEEecC-----CCccceeEeecCC----CCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeeccc--ceEEEE
Confidence 467766632 3456788877755 56889999999999999999999887643222222344554 899999
Q ss_pred EEeccCCCCCCCCCEEEec-----------------------------cCCeeeEEeecCCcccccCCCCCCCCcccccc
Q 042784 93 RVIRSKDSKYSDGDIVLRA-----------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLS 143 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~-----------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa 143 (356)
+.+|+++..+++||+|+.. .|++++|+.++.+.++.+ |+++++++ ++
T Consensus 70 ~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~---p~~~~~~~-a~ 145 (342)
T cd08266 70 EAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPI---PDNLSFEE-AA 145 (342)
T ss_pred EEeCCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeC---CCCCCHHH-HH
Confidence 9999999999999999932 378999999999887554 99999988 78
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhH
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 223 (356)
.++.++.+|++++.+..++.++++++|+|+++++|++++++++..|++|+++++++++.+.++ .++...+++..+ .++
T Consensus 146 ~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~ 223 (342)
T cd08266 146 AAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGADYVIDYRK-EDF 223 (342)
T ss_pred hhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCeEEecCC-hHH
Confidence 889999999999887888999999999999899999999999999999999999999999887 788877777665 566
Q ss_pred HHHHHHHC-CCCceEEEECCchhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccc
Q 042784 224 DAALTKYF-PNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMD 302 (356)
Q Consensus 224 ~~~i~~~~-~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (356)
.+.+.+.+ ++++|++++++|...+..++++++++|+++.+|...... ........+.+++++.+.....
T Consensus 224 ~~~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~--- 293 (342)
T cd08266 224 VREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYE-------APIDLRHVFWRQLSILGSTMGT--- 293 (342)
T ss_pred HHHHHHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCC-------CCcCHHHHhhcceEEEEEecCC---
Confidence 66676665 458999999999988999999999999999998654311 1122334467788887765543
Q ss_pred hHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 303 RFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 303 ~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
...+.++++++.++.+.+.++..|+++++++|++.+.++...+|+|+++
T Consensus 294 --~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 294 --KAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred --HHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 2467888999999999888888999999999999999888889999863
No 94
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=4.9e-34 Score=262.45 Aligned_cols=296 Identities=17% Similarity=0.141 Sum_probs=230.6
Q ss_pred CeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCC--------CCccCCCccCceeeeeEEEEEeccCCCC-
Q 042784 31 HLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTND--------GLYFPQFNLNQVILAFGIARVIRSKDSK- 101 (356)
Q Consensus 31 ~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~--------~~~~~~~~~g~~~~~~G~v~~vg~~v~~- 101 (356)
.+++++.+. |+++++||+|||.++++|+.|++...|... ......++...+++++|+|+++|++++.
T Consensus 10 ~~~~~~~~~----p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 85 (341)
T cd08262 10 PLVVRDVPD----PEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGTERK 85 (341)
T ss_pred ceEEEecCC----CCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCCCCcCC
Confidence 688887755 789999999999999999999998876211 0111223334456999999999999987
Q ss_pred CCCCCEEEe-------------------ccCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCC
Q 042784 102 YSDGDIVLR-------------------AFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQP 162 (356)
Q Consensus 102 ~~~Gd~V~~-------------------~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~ 162 (356)
+++||+|+. ..|+|++|+.++.+.+..+ |+++++++ + +++.++++||+++ ..+++
T Consensus 86 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l---P~~~s~~~-a-~~~~~~~~a~~~~-~~~~~ 159 (341)
T cd08262 86 LKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRV---PDGLSMED-A-ALTEPLAVGLHAV-RRARL 159 (341)
T ss_pred CCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEEC---CCCCCHHH-h-hhhhhHHHHHHHH-HhcCC
Confidence 999999993 2489999999999887555 99999987 4 4778899999996 67899
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHhCCCceeecCChh---hHHHHHHHHC-CCCceE
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCK-VVGSTGSDDNVKLLKEEFGYDDAFNYNSEM---SFDAALTKYF-PNGIDV 237 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~-V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~---~~~~~i~~~~-~~~~d~ 237 (356)
++|++|+|+|+ |++|.+++|+|+.+|++ +++++.++++.+.++ ++|++++++++... .+. .+.+.. ++++|+
T Consensus 160 ~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~ 236 (341)
T cd08262 160 TPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALAL-AMGADIVVDPAADSPFAAWA-AELARAGGPKPAV 236 (341)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCE
Confidence 99999999975 99999999999999995 777777888999888 89998888876521 222 344444 458999
Q ss_pred EEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHH
Q 042784 238 YLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIK 316 (356)
Q Consensus 238 vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 316 (356)
+||++|+ ..+..++++++++|+++.+|...... . ... ...+.+++++...... ..+.++++++++.
T Consensus 237 vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~-----~--~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~ 303 (341)
T cd08262 237 IFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESD-----N--IEP-ALAIRKELTLQFSLGY-----TPEEFADALDALA 303 (341)
T ss_pred EEECCCCHHHHHHHHHHhccCCEEEEECCCCCCC-----c--cCH-HHHhhcceEEEEEecc-----cHHHHHHHHHHHH
Confidence 9999998 47888999999999999998763311 0 111 1123466666543321 2346788999999
Q ss_pred cCCeee--eeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 317 EGKIRS--KHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 317 ~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
++.+.+ .+.+++++++++++++.+.+++..||+|++
T Consensus 304 ~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 304 EGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred cCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 999875 346789999999999999999999999974
No 95
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=1.4e-33 Score=256.38 Aligned_cols=306 Identities=22% Similarity=0.258 Sum_probs=249.3
Q ss_pred CCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEEEeccCCCCCCCCC
Q 042784 27 PTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGD 106 (356)
Q Consensus 27 ~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd 106 (356)
+.+..+.+.+.+. |.+.++||+|||.++++|+.|.....|.... ..+..+|+ ++.|+|+.+|+++.++++||
T Consensus 9 ~~~~~~~~~~~~~----~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~--~~~~~~g~--e~~G~v~~~g~~~~~~~~G~ 80 (320)
T cd05286 9 GGPEVLEYEDVPV----PEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL--PLPFVLGV--EGAGVVEAVGPGVTGFKVGD 80 (320)
T ss_pred CCccceEEeecCC----CCCCCCEEEEEEEEeecCHHHHHHhcCCCCC--CCCccCCc--ceeEEEEEECCCCCCCCCCC
Confidence 3445677777644 5688999999999999999999888764322 22334554 88899999999999999999
Q ss_pred EEEec--cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHH
Q 042784 107 IVLRA--FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQL 184 (356)
Q Consensus 107 ~V~~~--~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~l 184 (356)
+|+.. .|++++|+.++.+.+++. |+++++++ +++++..++++++++...+++.+|++|+|+|++|++|++++++
T Consensus 81 ~V~~~~~~g~~~~~~~~~~~~~~~~---p~~~~~~~-~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~ 156 (320)
T cd05286 81 RVAYAGPPGAYAEYRVVPASRLVKL---PDGISDET-AAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQW 156 (320)
T ss_pred EEEEecCCCceeEEEEecHHHceeC---CCCCCHHH-HhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHH
Confidence 99932 589999999999887555 99999988 7889999999999998888999999999999999999999999
Q ss_pred HHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHC-CCCceEEEECCchhhHHHHHHhcccCCEEEEE
Q 042784 185 AKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYF-PNGIDVYLDNVGGKMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 185 a~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~-~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~ 263 (356)
++.+|++|++++.++++.+.++ ++|++.+++..+ .++.+.+.+.+ ++++|.+++|+++.....++++++++|+++.+
T Consensus 157 a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~ 234 (320)
T cd05286 157 AKALGATVIGTVSSEEKAELAR-AAGADHVINYRD-EDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSF 234 (320)
T ss_pred HHHcCCEEEEEcCCHHHHHHHH-HCCCCEEEeCCc-hhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEE
Confidence 9999999999999999999997 899988887765 67777788776 45899999999988889999999999999999
Q ss_pred ecccccccccccccchhhhhhhhccceEEEEEeccccc---chHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHH
Q 042784 264 GMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM---DRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSL 340 (356)
Q Consensus 264 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~ 340 (356)
|...... ...+...+..+++++.......+. ....+.++++++++.++.+.+.++..|++++++++++.+
T Consensus 235 g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~ 307 (320)
T cd05286 235 GNASGPV-------PPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDL 307 (320)
T ss_pred ecCCCCC-------CccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHH
Confidence 8754310 111223333778888765543322 233456778899999999887777789999999999999
Q ss_pred HcCCCcceEEEEe
Q 042784 341 FSSSNIGKVVIQV 353 (356)
Q Consensus 341 ~~~~~~gkvvi~~ 353 (356)
.++...+|+|+++
T Consensus 308 ~~~~~~~~vv~~~ 320 (320)
T cd05286 308 ESRKTTGKLLLIP 320 (320)
T ss_pred HcCCCCceEEEeC
Confidence 9988889999863
No 96
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=8.2e-34 Score=260.42 Aligned_cols=314 Identities=19% Similarity=0.191 Sum_probs=245.4
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
|+++++++.+ +...++.+.+++++. |.+.+++|+||+.++++|++|+....|... ....+..+| +++.|+|
T Consensus 1 ~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~g--~e~~G~v 71 (336)
T cd08252 1 MKAIGFTQPL--PITDPDSLIDIELPK----PVPGGRDLLVRVEAVSVNPVDTKVRAGGAP-VPGQPKILG--WDASGVV 71 (336)
T ss_pred CceEEecCCC--CCCcccceeEccCCC----CCCCCCEEEEEEEEEEcCHHHHHHHcCCCC-CCCCCcccc--cceEEEE
Confidence 4567777542 101122466666644 678999999999999999999988776432 112333445 4889999
Q ss_pred EEeccCCCCCCCCCEEEec-----cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCC---
Q 042784 93 RVIRSKDSKYSDGDIVLRA-----FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKS--- 164 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~-----~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~--- 164 (356)
+.+|+++..+++||+|+.. .|+|++|+.++.+.+... |+++++++ ++.+++.+.+||+++.+.+++.+
T Consensus 72 ~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~i---p~~~~~~~-~~~~~~~~~ta~~~l~~~~~~~~~~~ 147 (336)
T cd08252 72 EAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHK---PKSLSFAE-AAALPLTSLTAWEALFDRLGISEDAE 147 (336)
T ss_pred EEcCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHHeeeC---CCCCCHHH-hhhhhhHHHHHHHHHHHhcCCCCCcC
Confidence 9999999999999999932 289999999999887554 99999998 78999999999999877788887
Q ss_pred --CCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEEC
Q 042784 165 --GSNVFVSAAAGGVGMFAGQLAKLKG-CKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDN 241 (356)
Q Consensus 165 --g~~VlV~g~~g~vG~~~i~la~~~G-~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~ 241 (356)
|++|+|+|++|++|++++++|+.+| ++|++++.++++.+.++ ++|++.++++.. ++.+.++...++++|++|||
T Consensus 148 ~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~i~~~~~~~~d~vl~~ 224 (336)
T cd08252 148 NEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVK-ELGADHVINHHQ--DLAEQLEALGIEPVDYIFCL 224 (336)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCcEEEeCCc--cHHHHHHhhCCCCCCEEEEc
Confidence 9999999999999999999999999 89999998999999997 899988888763 56666665545689999999
Q ss_pred Cch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccc---c----chHHHHHHHHHH
Q 042784 242 VGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSH---M----DRFADFTVEMES 313 (356)
Q Consensus 242 ~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~l~~~~~ 313 (356)
+|+ ..+..++++++++|+++.+|.... ..+...++.+++++.+...... . ......++++++
T Consensus 225 ~~~~~~~~~~~~~l~~~g~~v~~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (336)
T cd08252 225 TDTDQHWDAMAELIAPQGHICLIVDPQE----------PLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVAD 294 (336)
T ss_pred cCcHHHHHHHHHHhcCCCEEEEecCCCC----------cccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHH
Confidence 995 688999999999999999986421 1122233467777776544321 1 123466888999
Q ss_pred HHHcCCeeeeeeE---EeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 314 YIKEGKIRSKHVI---YYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 314 ~~~~g~i~~~~~~---~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
++.++.+.+.+.. .++++++++|++.+.++...+|+|++
T Consensus 295 ~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 295 LLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred HHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 9999999876443 47999999999999999888999863
No 97
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=9.1e-34 Score=259.92 Aligned_cols=300 Identities=21% Similarity=0.222 Sum_probs=237.9
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||++++.+. +.+++.+.++ |.++++||+||+.++++|+.|+....|..... +|...+.+++|+|
T Consensus 1 ~~a~~~~~~--------~~~~~~~~~~----~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~----~p~~~g~~~~G~v 64 (334)
T cd08234 1 MKALVYEGP--------GELEVEEVPV----PEPGPDEVLIKVAACGICGTDLHIYEGEFGAA----PPLVPGHEFAGVV 64 (334)
T ss_pred CeeEEecCC--------CceEEEeccC----CCCCCCeEEEEEEEEeEchhhhHHhcCCCCCC----CCcccccceEEEE
Confidence 567777643 3678887755 77999999999999999999999888654321 3334445899999
Q ss_pred EEeccCCCCCCCCCEEEe-----------------------------ccCCeeeEEeecCCcccccCCCCCCCCcccccc
Q 042784 93 RVIRSKDSKYSDGDIVLR-----------------------------AFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLS 143 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~-----------------------------~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa 143 (356)
+.+|++++.+++||+|+. ..|+|++|+.++.+.++.+ |+++++.+ ++
T Consensus 65 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l---P~~~~~~~-aa 140 (334)
T cd08234 65 VAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKI---PDNLSFEE-AA 140 (334)
T ss_pred EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEEC---cCCCCHHH-Hh
Confidence 999999999999999983 1488999999999888665 99999988 55
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHhCCCceeecCChhh
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCK-VVGSTGSDDNVKLLKEEFGYDDAFNYNSEMS 222 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~-V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~ 222 (356)
.+ ..+.++++++ +.+++++|++|+|+|+ |.+|.+++++|+..|++ |+++++++++.+.++ ++|++.++++.+ .+
T Consensus 141 ~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~ 215 (334)
T cd08234 141 LA-EPLSCAVHGL-DLLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK-KLGATETVDPSR-ED 215 (334)
T ss_pred hh-hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCeEEecCCC-CC
Confidence 54 7888999998 6789999999999975 99999999999999996 888988999999997 899988888765 34
Q ss_pred HHHHHHHHCCCCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccccc
Q 042784 223 FDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM 301 (356)
Q Consensus 223 ~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (356)
+... +...++++|++|||+|. ..+..++++++++|+++.+|...... . .......++.+++++.+....
T Consensus 216 ~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~--- 285 (334)
T cd08234 216 PEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDA-----R-VSISPFEIFQKELTIIGSFIN--- 285 (334)
T ss_pred HHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCC-----C-cccCHHHHHhCCcEEEEeccC---
Confidence 4444 33445689999999975 57889999999999999998754311 0 111223344567777765432
Q ss_pred chHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 302 DRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 302 ~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
.+.++++++++.++.+.+ .++.++++++++++++.+.+ ...||+|+
T Consensus 286 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 286 ---PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred ---HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 346788999999999875 35678999999999999998 77889886
No 98
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=7e-34 Score=261.22 Aligned_cols=294 Identities=17% Similarity=0.195 Sum_probs=231.5
Q ss_pred CCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhc-CCCCCCccCCCccCceeeeeEEEEEeccCCCCCCCCC
Q 042784 28 TSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMT-GTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGD 106 (356)
Q Consensus 28 ~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~-g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd 106 (356)
+.+.+++++.++ |.++++||+|||.++++|++|..... |.. +.....++...+++++|+|+.+|+++..+++||
T Consensus 5 ~~~~~~~~~~~~----p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~-~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 79 (339)
T cd08232 5 AAGDLRVEERPA----PEPGPGEVRVRVAAGGICGSDLHYYQHGGF-GTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQ 79 (339)
T ss_pred cCCceEEEEcCC----CCCCCCEEEEEEEEEEECcccHHHHcCCCC-CcccccCCeecCccceEEEEeeCCCCCcCCCCC
Confidence 347899999866 77999999999999999999988763 321 111222333445599999999999999999999
Q ss_pred EEEe----------------------------------ccCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhH
Q 042784 107 IVLR----------------------------------AFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAA 152 (356)
Q Consensus 107 ~V~~----------------------------------~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta 152 (356)
+|+. ..|+|++|+.++.+.++++ |+++++++ ++ +..++++|
T Consensus 80 ~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~i---P~~~~~~~-aa-~~~~~~~a 154 (339)
T cd08232 80 RVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPL---PDGLSLRR-AA-LAEPLAVA 154 (339)
T ss_pred EEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEEC---cCCCCHHH-hh-hcchHHHH
Confidence 9983 1488999999999888565 99999988 44 46888999
Q ss_pred HHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHC
Q 042784 153 WVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYF 231 (356)
Q Consensus 153 ~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~ 231 (356)
|+++.....+ ++++|||+| +|++|.+++++|+.+|+ +|++++.++++.++++ ++|+++++++++ .++ .++.
T Consensus 155 ~~~l~~~~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~-~~g~~~vi~~~~-~~~----~~~~ 226 (339)
T cd08232 155 LHAVNRAGDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVAR-AMGADETVNLAR-DPL----AAYA 226 (339)
T ss_pred HHHHHhcCCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCCEEEcCCc-hhh----hhhh
Confidence 9999766666 899999987 59999999999999999 8999998888888887 899988898865 332 2222
Q ss_pred --CCCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHH
Q 042784 232 --PNGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFT 308 (356)
Q Consensus 232 --~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 308 (356)
.+++|+++||+|. ..+...+++|+++|+++.+|..... ...+...++.+++++.+... ..+.+
T Consensus 227 ~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~------~~~~~ 292 (339)
T cd08232 227 ADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGP--------VPLPLNALVAKELDLRGSFR------FDDEF 292 (339)
T ss_pred ccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC--------ccCcHHHHhhcceEEEEEec------CHHHH
Confidence 2469999999995 5788999999999999999864310 11123334567777766542 23467
Q ss_pred HHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 309 VEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 309 ~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
+++++++.++.+++ .+..+|+++++++|++.+.++...||+|+++
T Consensus 293 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 293 AEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 88999999998864 3667899999999999999888889999874
No 99
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.9e-34 Score=259.29 Aligned_cols=317 Identities=21% Similarity=0.213 Sum_probs=242.5
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
+|+|.+... +.++.+++++.++ |.|.++||+|++.++++|+.|..+..|...... +++...+++++|+|
T Consensus 1 ~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~--~~~~~~g~e~~G~v 69 (331)
T cd08273 1 NREVVVTRR-----GGPEVLKVVEADL----PEPAAGEVVVKVEASGVSFADVQMRRGLYPDQP--PLPFTPGYDLVGRV 69 (331)
T ss_pred CeeEEEccC-----CCcccEEEeccCC----CCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCC--CCCcccccceEEEE
Confidence 366777754 4567899998876 678899999999999999999998876432221 23333445889999
Q ss_pred EEeccCCCCCCCCCEEEec--cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEE
Q 042784 93 RVIRSKDSKYSDGDIVLRA--FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFV 170 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~--~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV 170 (356)
+.+|+++..+++||+|+.. .|+|++|+.++.+.++.. |+++++++ ++.+++++.+||+++.+.+++.+|++|+|
T Consensus 70 ~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~---p~~~~~~~-a~~~~~~~~ta~~~l~~~~~~~~g~~vlI 145 (331)
T cd08273 70 DALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPV---PEGVDAAE-AVCLVLNYVTAYQMLHRAAKVLTGQRVLI 145 (331)
T ss_pred EEeCCCCccCCCCCEEEEeCCCcceeeEEEechHHeEEC---CCCCCHHH-HHhhhhHHHHHHHHHHHhcCCCCCCEEEE
Confidence 9999999999999999932 289999999999887555 99999998 78999999999999987788999999999
Q ss_pred EcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchhhHHHH
Q 042784 171 SAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAV 250 (356)
Q Consensus 171 ~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~ 250 (356)
+|++|++|++++++|+..|++|++++. +++.+.++ ++|+. .+++.. .++... +..++++|.++||+|+.....+
T Consensus 146 ~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~g~~-~~~~~~-~~~~~~--~~~~~~~d~vl~~~~~~~~~~~ 219 (331)
T cd08273 146 HGASGGVGQALLELALLAGAEVYGTAS-ERNHAALR-ELGAT-PIDYRT-KDWLPA--MLTPGGVDVVFDGVGGESYEES 219 (331)
T ss_pred ECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHH-HcCCe-EEcCCC-cchhhh--hccCCCceEEEECCchHHHHHH
Confidence 999999999999999999999999996 88888887 78975 455543 344333 3344689999999999888999
Q ss_pred HHhcccCCEEEEEecccccccccccccchh---------hhhhhhccceEEEEEeccc--ccchHHHHHHHHHHHHHcCC
Q 042784 251 LNHVNVHARIILCGMISQYNKVWTERDGVR---------NLLNMIGKEVKMEGFMIGS--HMDRFADFTVEMESYIKEGK 319 (356)
Q Consensus 251 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~g~ 319 (356)
+++++++|+++.+|........ .....+. .....+.+++++....... ......+.++++++++.++.
T Consensus 220 ~~~l~~~g~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 298 (331)
T cd08273 220 YAALAPGGTLVCYGGNSSLLQG-RRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGK 298 (331)
T ss_pred HHHhcCCCEEEEEccCCCCCCc-cccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999999876542100 0000000 0011122333333322211 11234577889999999999
Q ss_pred eeeeeeEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 320 IRSKHVIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 320 i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
+.+.+..++++++++++++.+.+++..||+|+
T Consensus 299 l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 299 IRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred ccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 98877789999999999999998888889886
No 100
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.3e-33 Score=260.10 Aligned_cols=303 Identities=16% Similarity=0.157 Sum_probs=238.2
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCC-CCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSI-PDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
||+|++.+ ++.+++++.++ |.| +++||+||+.++++|++|+....|.... ..+..+ ++|++|+
T Consensus 1 m~~~~~~~--------~~~~~~~~~~~----p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~--g~e~~G~ 64 (345)
T cd08287 1 MRATVIHG--------PGDIRVEEVPD----PVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT--RAPAPI--GHEFVGV 64 (345)
T ss_pred CceeEEec--------CCceeEEeCCC----CCCCCCCeEEEEEeeeeecccchhhhcCCCCC--CCCccc--ccceEEE
Confidence 56777764 24688888866 665 8999999999999999999888764321 223444 4599999
Q ss_pred EEEeccCCCCCCCCCEEEecc-----------------------------CCeeeEEeecCC--cccccCCCCCCCCccc
Q 042784 92 ARVIRSKDSKYSDGDIVLRAF-----------------------------LPVAEYSLLPCD--LLTRKLDPASGIPFPD 140 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~~-----------------------------g~~a~~~~v~~~--~~~~~i~~P~~~s~~~ 140 (356)
|+++|+++..+++||+|+..+ |+|++|+.++.+ .++++ |++++++.
T Consensus 65 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~l---P~~l~~~~ 141 (345)
T cd08287 65 VEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKV---PGSPSDDE 141 (345)
T ss_pred EEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEEC---CCCCChhh
Confidence 999999999999999998311 889999999974 56444 99998722
Q ss_pred c-c---cccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCcee
Q 042784 141 Y-L---SSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAF 215 (356)
Q Consensus 141 ~-a---a~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~ 215 (356)
. + +++...+.+|++++. .+++++|++|+|.| +|++|++++++|+..|+ .++++++++++.+.++ ++|++.++
T Consensus 142 ~~~~~~~~l~~~~~~a~~~~~-~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~ga~~v~ 218 (345)
T cd08287 142 DLLPSLLALSDVMGTGHHAAV-SAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAR-EFGATDIV 218 (345)
T ss_pred hhhhhhHhhhcHHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCceEe
Confidence 0 1 134467899999985 68899999999977 69999999999999999 5888887888888888 89999999
Q ss_pred ecCChhhHHHHHHHHCC-CCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEE
Q 042784 216 NYNSEMSFDAALTKYFP-NGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKME 293 (356)
Q Consensus 216 ~~~~~~~~~~~i~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (356)
+++. .++.+.+.++++ +++|+++||+|+ ..+..++++++++|+++.+|..... ...+....+.+++++.
T Consensus 219 ~~~~-~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~--------~~~~~~~~~~~~~~~~ 289 (345)
T cd08287 219 AERG-EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGG--------VELDVRELFFRNVGLA 289 (345)
T ss_pred cCCc-ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCC--------CccCHHHHHhcceEEE
Confidence 9876 567788888764 589999999986 5889999999999999998865421 1122334567888887
Q ss_pred EEecccccchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 294 GFMIGSHMDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 294 ~~~~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
+.... ..+.++++++++.++.+++ .++..++++++++|++.+.+++. .|++|+
T Consensus 290 ~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~ 344 (345)
T cd08287 290 GGPAP-----VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRA-IKVLLR 344 (345)
T ss_pred EecCC-----cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCc-eEEEeC
Confidence 64322 2357888999999999886 45678999999999999887665 499985
No 101
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.2e-33 Score=259.88 Aligned_cols=307 Identities=20% Similarity=0.137 Sum_probs=237.1
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|++...+ ..+++.+.+. |.+.++|++|||.++++|+.|..++.+.........++...+++++|+|
T Consensus 1 ~~~~~~~~~~-------~~~~~~~~~~----~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V 69 (341)
T cd05281 1 MKAIVKTKAG-------PGAELVEVPV----PKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEV 69 (341)
T ss_pred CcceEEecCC-------CceEEEeCCC----CCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEE
Confidence 5778888543 3688887754 7789999999999999999998876542211111122333445899999
Q ss_pred EEeccCCCCCCCCCEEEe-----------------------------ccCCeeeEEeecCCcccccCCCCCCCCcccccc
Q 042784 93 RVIRSKDSKYSDGDIVLR-----------------------------AFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLS 143 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~-----------------------------~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa 143 (356)
+.+|++++.+++||+|+. ..|+|++|++++.+.++.+ |++++.+. +
T Consensus 70 ~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~l---P~~~~~~~--a 144 (341)
T cd05281 70 VEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKN---DKDIPPEI--A 144 (341)
T ss_pred EEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEEC---cCCCCHHH--h
Confidence 999999999999999983 1488999999999887554 99999854 6
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeecCChhh
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMS 222 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~ 222 (356)
+++..+.++++++. ...++|++|+|+|+ |++|++++++|+..|+ +|++++.++++...++ ++|++++++++. .+
T Consensus 145 ~~~~~~~~a~~~~~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~ 219 (341)
T cd05281 145 SIQEPLGNAVHTVL--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAK-KMGADVVINPRE-ED 219 (341)
T ss_pred hhhhHHHHHHHHHH--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCcceeeCccc-cc
Confidence 78888899998875 34578999999875 9999999999999999 7999988888888888 899988888765 56
Q ss_pred HHHHHHHHCC-CCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccc
Q 042784 223 FDAALTKYFP-NGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSH 300 (356)
Q Consensus 223 ~~~~i~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (356)
+. .++++++ +++|++|||+|. .....++++|+++|+++.+|..... ... ........+++.+.+.....
T Consensus 220 ~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~--~~~~~~~~~~~~~~~~~~~~- 290 (341)
T cd05281 220 VV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGP-----VDI--DLNNLVIFKGLTVQGITGRK- 290 (341)
T ss_pred HH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC-----ccc--ccchhhhccceEEEEEecCC-
Confidence 76 7777764 589999999986 4788999999999999998865431 010 11112455666666654221
Q ss_pred cchHHHHHHHHHHHHHcCCee--eeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 301 MDRFADFTVEMESYIKEGKIR--SKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 301 ~~~~~~~l~~~~~~~~~g~i~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
..+.++++++++.++.+. +.+...++++++++||+.+.+++ .||+|+++
T Consensus 291 ---~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 291 ---MFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred ---cchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 224567889999999876 44666899999999999999988 89999863
No 102
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.3e-33 Score=254.86 Aligned_cols=311 Identities=21% Similarity=0.293 Sum_probs=249.4
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|++... +.++.+++++.+. |.+.+++|+|++.++++|++|+....|........+..+|+ +++|+|
T Consensus 1 ~~a~~~~~~-----~~~~~~~~~~~~~----~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~--e~~G~v 69 (326)
T cd08272 1 MKALVLESF-----GGPEVFELREVPR----PQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGC--DVAGVV 69 (326)
T ss_pred CeEEEEccC-----CCchheEEeecCC----CCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCccccc--ceeEEE
Confidence 577877654 3445688887755 56889999999999999999999887643211112334454 889999
Q ss_pred EEeccCCCCCCCCCEEEec-------cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCC
Q 042784 93 RVIRSKDSKYSDGDIVLRA-------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSG 165 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~-------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g 165 (356)
+.+|+++.++++||+|+.. .|+|++|+.++.+.++.. |+++++.+ ++.++..+.+||+++.+..++++|
T Consensus 70 ~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~---p~~~~~~~-~~~~~~~~~~a~~~l~~~~~~~~~ 145 (326)
T cd08272 70 EAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALK---PANLSMRE-AAALPLVGITAWEGLVDRAAVQAG 145 (326)
T ss_pred EEeCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHHcccC---CCCCCHHH-HHHhHHHHHHHHHHHHHhcCCCCC
Confidence 9999999999999999932 478999999998877554 99999988 788899999999998878999999
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCC-CCceEEEECCch
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFP-NGIDVYLDNVGG 244 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~-~~~d~vld~~g~ 244 (356)
++++|+|++|++|++++++++..|++|++++++ ++.+.++ ++|.+.+++... . +...+.+.++ .++|.++||+|+
T Consensus 146 ~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~-~-~~~~~~~~~~~~~~d~v~~~~~~ 221 (326)
T cd08272 146 QTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-SLGADPIIYYRE-T-VVEYVAEHTGGRGFDVVFDTVGG 221 (326)
T ss_pred CEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHH-HcCCCEEEecch-h-HHHHHHHhcCCCCCcEEEECCCh
Confidence 999999999999999999999999999999977 8888887 899988888765 4 7777887774 589999999999
Q ss_pred hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccc--c----cchHHHHHHHHHHHHHcC
Q 042784 245 KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGS--H----MDRFADFTVEMESYIKEG 318 (356)
Q Consensus 245 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~l~~~~~~~~~g 318 (356)
.....++++++++|+++.+|.... . .......+++++.+..... . .....+.+.++++++.++
T Consensus 222 ~~~~~~~~~l~~~g~~v~~~~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 290 (326)
T cd08272 222 ETLDASFEAVALYGRVVSILGGAT-H----------DLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERG 290 (326)
T ss_pred HHHHHHHHHhccCCEEEEEecCCc-c----------chhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCC
Confidence 888889999999999999876531 0 1111225666666655322 1 122346788899999999
Q ss_pred Ceeeeee-EEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 319 KIRSKHV-IYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 319 ~i~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
.+.+.++ ..|+++++.++++.+.+++..+|+|+++
T Consensus 291 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 291 QLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred CcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 9987765 8899999999999999888889999864
No 103
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=3.4e-34 Score=264.40 Aligned_cols=323 Identities=25% Similarity=0.330 Sum_probs=236.9
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCC-CCCcEEEEEEEEEeChhhhhhhcCCCCCC------------ccCC
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSI-PDHHVAVETLWISIDPYLRATMTGTNDGL------------YFPQ 79 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~------------~~~~ 79 (356)
||++.+.+++ ...+.+++++.++ |.| +++||+|||.++++|++|.....|...+. ....
T Consensus 1 ~~a~~~~~~~----~~~~~~~~~~~~~----p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~ 72 (350)
T cd08248 1 MKAWQIHSYG----GIDSLLLLENARI----PVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIE 72 (350)
T ss_pred CceEEecccC----CCcceeeecccCC----CCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCC
Confidence 5777777653 1112478887655 778 49999999999999999999887631100 0112
Q ss_pred CccCceeeeeEEEEEeccCCCCCCCCCEEEec-----cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHH
Q 042784 80 FNLNQVILAFGIARVIRSKDSKYSDGDIVLRA-----FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWV 154 (356)
Q Consensus 80 ~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~~~-----~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~ 154 (356)
+|...|+|++|+|..+|+++..+++||+|+.. .|+|++|+.++.+.++.. |+++++++ ++.+++.+.|||+
T Consensus 73 ~p~~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~l---p~~~~~~~-aa~~~~~~~ta~~ 148 (350)
T cd08248 73 FPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKK---PKNLSHEE-AASLPYAGLTAWS 148 (350)
T ss_pred CCeeecceeEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecC---CCCCCHHH-HhhchhHHHHHHH
Confidence 23344458999999999999999999999931 589999999999888554 99999988 7899999999999
Q ss_pred HHHHhCCCCC----CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHH
Q 042784 155 GIEVLGQPKS----GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKY 230 (356)
Q Consensus 155 ~l~~~~~~~~----g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~ 230 (356)
++...+++.+ |++|+|+|++|++|++++++|+.+|++|+++.++ ++.+.++ ++|.+.+++..+ .++.+.+..
T Consensus 149 ~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~-~~~~~~l~~- 224 (350)
T cd08248 149 ALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVK-SLGADDVIDYNN-EDFEEELTE- 224 (350)
T ss_pred HHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHH-HhCCceEEECCC-hhHHHHHHh-
Confidence 9987777754 9999999999999999999999999999988854 6777777 899988888765 455555543
Q ss_pred CCCCceEEEECCchhhHHHHHHhcccCCEEEEEeccccccccc-ccc-cchhhhhhhhccceE-E-EEEec-ccccchHH
Q 042784 231 FPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMISQYNKVW-TER-DGVRNLLNMIGKEVK-M-EGFMI-GSHMDRFA 305 (356)
Q Consensus 231 ~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~-~~~~~~~~~~~~~~~-~-~~~~~-~~~~~~~~ 305 (356)
.+++|++|||+|......++++++++|+++.+|......... ... ........+...... + ..... ........
T Consensus 225 -~~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (350)
T cd08248 225 -RGKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSG 303 (350)
T ss_pred -cCCCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCH
Confidence 257999999999988999999999999999998643211000 000 000000011111100 0 00000 00011234
Q ss_pred HHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 306 DFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 306 ~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
..+.++++++.++.+.+.++..|++++++++++.+.++...+|++++
T Consensus 304 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 304 SALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 67889999999999988888899999999999999988878888863
No 104
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1.5e-33 Score=256.90 Aligned_cols=285 Identities=19% Similarity=0.151 Sum_probs=226.4
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|++... ++++++++++ |+++++||+||+.++++|+.|.....|.+ . ++...+++++|+|
T Consensus 1 ~~a~~~~~~--------~~~~~~~~~~----p~~~~~~vlV~v~a~~i~~~d~~~~~g~~----~--~~~~~G~e~~G~V 62 (319)
T cd08242 1 MKALVLDGG--------LDLRVEDLPK----PEPPPGEALVRVLLAGICNTDLEIYKGYY----P--FPGVPGHEFVGIV 62 (319)
T ss_pred CeeEEEeCC--------CcEEEEECCC----CCCCCCeEEEEEEEEEEccccHHHHcCCC----C--CCCccCceEEEEE
Confidence 467887642 4688988866 78999999999999999999999887643 2 3334445999999
Q ss_pred EEeccCCCCCCCCCEEEe--------------------------c----cCCeeeEEeecCCcccccCCCCCCCCccccc
Q 042784 93 RVIRSKDSKYSDGDIVLR--------------------------A----FLPVAEYSLLPCDLLTRKLDPASGIPFPDYL 142 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~--------------------------~----~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~a 142 (356)
+++|++ +++||||.. + .|+|++|+.++.+.+++. |++++.++ +
T Consensus 63 v~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l---P~~~~~~~-a 135 (319)
T cd08242 63 EEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVV---PDLVPDEQ-A 135 (319)
T ss_pred EEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEEC---cCCCCHHH-h
Confidence 999998 679999951 1 478999999999887555 99999987 4
Q ss_pred cccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhh
Q 042784 143 SSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMS 222 (356)
Q Consensus 143 a~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~ 222 (356)
+.+ ....++|.++ +..++++|++|+|+| +|++|++++|+|+.+|++|++++.++++.+.++ ++|++.++++.. .
T Consensus 136 a~~-~~~~~~~~~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~-~- 209 (319)
T cd08242 136 VFA-EPLAAALEIL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR-RLGVETVLPDEA-E- 209 (319)
T ss_pred hhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEeCccc-c-
Confidence 443 5556677666 578899999999997 599999999999999999999999999999999 799987777643 1
Q ss_pred HHHHHHHHCCCCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccccc
Q 042784 223 FDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM 301 (356)
Q Consensus 223 ~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (356)
..++++|+++||+|. ..+..++++++++|+++..+..... ...+...++.++.++.+.....
T Consensus 210 -------~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~--------~~~~~~~~~~~~~~i~~~~~~~-- 272 (319)
T cd08242 210 -------SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGP--------ASFDLTKAVVNEITLVGSRCGP-- 272 (319)
T ss_pred -------ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCC--------CccCHHHheecceEEEEEeccc--
Confidence 234579999999987 4788999999999999986654321 1223445667788887764432
Q ss_pred chHHHHHHHHHHHHHcCCe--eeeeeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 302 DRFADFTVEMESYIKEGKI--RSKHVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 302 ~~~~~~l~~~~~~~~~g~i--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
++++++++.++.+ .+.+++.|+++++.+||+.+.++. .+|+|++
T Consensus 273 ------~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~ 318 (319)
T cd08242 273 ------FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLR 318 (319)
T ss_pred ------HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 5778899999998 556778999999999999998665 5899986
No 105
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.7e-33 Score=253.44 Aligned_cols=316 Identities=18% Similarity=0.244 Sum_probs=254.3
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|.+..- +.++.+.+++.+. |.+++++|+|+|.++++|+.|.....|........+..+|+ +++|+|
T Consensus 1 ~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~--e~~G~v 69 (328)
T cd08268 1 MRAVRFHQF-----GGPEVLRIEELPV----PAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGY--EAAGVV 69 (328)
T ss_pred CeEEEEecc-----CCcceeEEeecCC----CCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCc--ceEEEE
Confidence 456666532 3346778877655 56889999999999999999998877654333222344454 889999
Q ss_pred EEeccCCCCCCCCCEEEecc--------CCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCC
Q 042784 93 RVIRSKDSKYSDGDIVLRAF--------LPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKS 164 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~~--------g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~ 164 (356)
+.+|+++.++++||+|+ ++ |++++|+.++.+.++.. |+++++++ ++++++.+.+||+++...+++.+
T Consensus 70 ~~~G~~~~~~~~Gd~V~-~~~~~~~~~~g~~~~~~~~~~~~~~~~---p~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~ 144 (328)
T cd08268 70 EAVGAGVTGFAVGDRVS-VIPAADLGQYGTYAEYALVPAAAVVKL---PDGLSFVE-AAALWMQYLTAYGALVELAGLRP 144 (328)
T ss_pred EeeCCCCCcCCCCCEEE-eccccccCCCccceEEEEechHhcEeC---CCCCCHHH-HHHhhhHHHHHHHHHHHhcCCCC
Confidence 99999999999999999 43 88999999999887555 99999988 78999999999999987888999
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCC-CCceEEEECCc
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFP-NGIDVYLDNVG 243 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~-~~~d~vld~~g 243 (356)
+++++|+|++|++|++++++++..|+++++++.++++.+.++ ++|.+.++++.. .++.+.+.+.+. .++|++++++|
T Consensus 145 ~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~~ 222 (328)
T cd08268 145 GDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-ALGAAHVIVTDE-EDLVAEVLRITGGKGVDVVFDPVG 222 (328)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEecCC-ccHHHHHHHHhCCCCceEEEECCc
Confidence 999999999999999999999999999999999999999997 889887887765 567677777664 47999999999
Q ss_pred hhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccccc---chHHHHHHHHHHHHHcCCe
Q 042784 244 GKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM---DRFADFTVEMESYIKEGKI 320 (356)
Q Consensus 244 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~g~i 320 (356)
+.....++++++++|+++.+|...... ...+....+.+++++.+..+.... ......++.+.+++.++.+
T Consensus 223 ~~~~~~~~~~l~~~g~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (328)
T cd08268 223 GPQFAKLADALAPGGTLVVYGALSGEP-------TPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGAL 295 (328)
T ss_pred hHhHHHHHHhhccCCEEEEEEeCCCCC-------CCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCC
Confidence 988899999999999999998654310 112223347788888887654321 2334567777788888888
Q ss_pred eeeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 321 RSKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 321 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
.+..+..|+++++.++++.+.+++..+|+|+++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 296 KPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred cCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 877777899999999999999888888999863
No 106
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=2.6e-33 Score=255.99 Aligned_cols=296 Identities=20% Similarity=0.264 Sum_probs=232.3
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|+++.. + ++.+++++.+. |+++++||+||+.++++|++|++...+.. ....+..+| ++++|+|
T Consensus 1 ~~~~~~~~~-----~-~~~~~~~~~~~----~~~~~~ev~v~v~~~~i~~~d~~~~~~~~--~~~~~~~~g--~e~~G~v 66 (325)
T cd08264 1 MKALVFEKS-----G-IENLKVEDVKD----PKPGPGEVLIRVKMAGVNPVDYNVINAVK--VKPMPHIPG--AEFAGVV 66 (325)
T ss_pred CeeEEeccC-----C-CCceEEEeccC----CCCCCCeEEEEEEEEEechHHHHHHhCCC--CCCCCeecc--cceeEEE
Confidence 467776532 2 46788877654 57899999999999999999998876411 111233445 4899999
Q ss_pred EEeccCCCCCCCCCEEEec-----------------------------cCCeeeEEeecCCcccccCCCCCCCCcccccc
Q 042784 93 RVIRSKDSKYSDGDIVLRA-----------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLS 143 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~-----------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa 143 (356)
+.+|++++.+++||+|+.. .|+|++|+.++.+.++++ |+++++++ ++
T Consensus 67 ~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~---p~~~~~~~-~~ 142 (325)
T cd08264 67 EEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKI---PDSISDEL-AA 142 (325)
T ss_pred EEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeC---CCCCCHHH-hh
Confidence 9999999999999999831 489999999999887554 99999998 78
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhH
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 223 (356)
.+++++.+||+++.. +++++|++|+|+|++|++|++++++|+..|++|++++ +.+.++ ++|+++++++++ .
T Consensus 143 ~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~----~~~~~~-~~g~~~~~~~~~---~ 213 (325)
T cd08264 143 SLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVS----RKDWLK-EFGADEVVDYDE---V 213 (325)
T ss_pred hhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEe----HHHHHH-HhCCCeeecchH---H
Confidence 999999999999964 8899999999999999999999999999999998886 236666 799988887653 3
Q ss_pred HHHHHHHCCCCceEEEECCchhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccch
Q 042784 224 DAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDR 303 (356)
Q Consensus 224 ~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (356)
.+.+++++ +++|+++|++|...+..++++++++|+++.+|..... ....+...++.++.++.+...+.
T Consensus 214 ~~~l~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~---- 281 (325)
T cd08264 214 EEKVKEIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGG-------EVKLDLSDLYSKQISIIGSTGGT---- 281 (325)
T ss_pred HHHHHHHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC-------CCccCHHHHhhcCcEEEEccCCC----
Confidence 55566666 7899999999998999999999999999999874221 12234445556677776654332
Q ss_pred HHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEE
Q 042784 304 FADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVV 350 (356)
Q Consensus 304 ~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv 350 (356)
++.++++++++.... ..+..+|+++++++|++.+.++...+|++
T Consensus 282 -~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv~ 325 (325)
T cd08264 282 -RKELLELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRIL 325 (325)
T ss_pred -HHHHHHHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCccccC
Confidence 356778888886444 45667899999999999999887777753
No 107
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=2.7e-33 Score=257.42 Aligned_cols=298 Identities=20% Similarity=0.170 Sum_probs=232.7
Q ss_pred CCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEEEeccCCCCCCCCCEEE
Q 042784 30 DHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVL 109 (356)
Q Consensus 30 ~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~ 109 (356)
+.+++++.+. |.+.++||+||+.++++|+.|+.++.+........+++...+++++|+|+++|++++++++||+|+
T Consensus 9 ~~~~l~~~~~----p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 9 YGAELTEVPV----PEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred CCcEEEECCC----CCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 5578887755 678999999999999999999988765311111112232334589999999999999999999998
Q ss_pred e-----------------------------ccCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhC
Q 042784 110 R-----------------------------AFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLG 160 (356)
Q Consensus 110 ~-----------------------------~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~ 160 (356)
. ..|+|++|++++++.++.. |++++.+. ++++..+.+|++++. .
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l---p~~~~~~~--a~~~~~~~~a~~~~~--~ 157 (340)
T TIGR00692 85 VETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKN---PKSIPPEY--ATIQEPLGNAVHTVL--A 157 (340)
T ss_pred ECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEEC---cCCCChHh--hhhcchHHHHHHHHH--c
Confidence 3 2489999999999887554 99999865 568888999998873 5
Q ss_pred CCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCC-CCceEE
Q 042784 161 QPKSGSNVFVSAAAGGVGMFAGQLAKLKGCK-VVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFP-NGIDVY 238 (356)
Q Consensus 161 ~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~-V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~-~~~d~v 238 (356)
...+|++|+|.| +|++|.+++++|+.+|++ |++++.++++.+.++ ++|++.++++.. .++.+.+.++++ +++|++
T Consensus 158 ~~~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~-~~~~~~l~~~~~~~~~d~v 234 (340)
T TIGR00692 158 GPISGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAK-KMGATYVVNPFK-EDVVKEVADLTDGEGVDVF 234 (340)
T ss_pred cCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEEcccc-cCHHHHHHHhcCCCCCCEE
Confidence 578999999977 599999999999999996 888877888888888 899988888866 678888888764 589999
Q ss_pred EECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHc
Q 042784 239 LDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKE 317 (356)
Q Consensus 239 ld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 317 (356)
|||+|+ ..+...+++++++|+++.+|..... .+ ......++.+++.+.+... ....+.+.++++++++
T Consensus 235 ld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~ 303 (340)
T TIGR00692 235 LEMSGAPKALEQGLQAVTPGGRVSLLGLPPGK-----VT--IDFTNKVIFKGLTIYGITG----RHMFETWYTVSRLIQS 303 (340)
T ss_pred EECCCCHHHHHHHHHhhcCCCEEEEEccCCCC-----cc--cchhhhhhhcceEEEEEec----CCchhhHHHHHHHHHc
Confidence 999885 5788899999999999999875321 01 1112244556677665442 1223557889999999
Q ss_pred CCee--eeeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 318 GKIR--SKHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 318 g~i~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
+.++ +.+...++++++.++++.+.+++ .||+|+++
T Consensus 304 ~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~gkvvv~~ 340 (340)
T TIGR00692 304 GKLDLDPIITHKFKFDKFEKGFELMRSGQ-TGKVILSL 340 (340)
T ss_pred CCCChHHheeeeeeHHHHHHHHHHHhcCC-CceEEEeC
Confidence 9986 45677899999999999998877 49999874
No 108
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=6e-33 Score=251.99 Aligned_cols=299 Identities=16% Similarity=0.107 Sum_probs=235.0
Q ss_pred CCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhh-cCCCCCCccCCCccCceeeeeEEEEEeccCCCCCCCCCE
Q 042784 29 SDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATM-TGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDI 107 (356)
Q Consensus 29 ~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~-~g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~ 107 (356)
++.++++++++ |.+.++||+||+.++++|+.|...+ .|..... .+..+...+++++|+|+.+|++++.+++||+
T Consensus 4 ~~~~~~~~~~~----~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~-~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 78 (312)
T cd08269 4 PGRFEVEEHPR----PTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFV-YPAEPGGPGHEGWGRVVALGPGVRGLAVGDR 78 (312)
T ss_pred CCeeEEEECCC----CCCCCCeEEEEEEEeeecccchHHHccCCCCcc-cCCCCcccceeeEEEEEEECCCCcCCCCCCE
Confidence 46788888765 7799999999999999999998887 5532111 1112333445899999999999999999999
Q ss_pred EEe-ccCCeeeEEeecCCcccccCCCCCCCCccccccccC-chhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHH
Q 042784 108 VLR-AFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLG-IPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLA 185 (356)
Q Consensus 108 V~~-~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~-~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la 185 (356)
|+. ..|+|++|+.++.+.+++. |+++ .. ++++ .++.++++++. .++++++++|+|+| +|++|.+++++|
T Consensus 79 V~~~~~g~~~~~~~v~~~~~~~l---P~~~--~~--~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la 149 (312)
T cd08269 79 VAGLSGGAFAEYDLADADHAVPL---PSLL--DG--QAFPGEPLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLA 149 (312)
T ss_pred EEEecCCcceeeEEEchhheEEC---CCch--hh--hHHhhhhHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHH
Confidence 993 2589999999999888555 8888 23 3444 78899999986 78899999999997 599999999999
Q ss_pred HHCCCE-EEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCC-CCceEEEECCch-hhHHHHHHhcccCCEEEE
Q 042784 186 KLKGCK-VVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFP-NGIDVYLDNVGG-KMLEAVLNHVNVHARIIL 262 (356)
Q Consensus 186 ~~~G~~-V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~ 262 (356)
+..|++ |+++++++++.++++ ++|++.+++++. .++.+.+.++++ .++|+++||+|. ..+..++++++++|+++.
T Consensus 150 ~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~ 227 (312)
T cd08269 150 AAAGARRVIAIDRRPARLALAR-ELGATEVVTDDS-EAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVI 227 (312)
T ss_pred HHcCCcEEEEECCCHHHHHHHH-HhCCceEecCCC-cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEE
Confidence 999997 999998888999887 899988887665 678888888774 589999999986 478899999999999999
Q ss_pred EecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeee--eeeEEeChhhHHHHHHHH
Q 042784 263 CGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRS--KHVIYYGVESFLESLGSL 340 (356)
Q Consensus 263 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~--~~~~~~~~~~~~~a~~~~ 340 (356)
+|...... ...+......+++.+.++...+. ....+.+++++++++++.+.+ .+..+|+++++++|++.+
T Consensus 228 ~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~ 299 (312)
T cd08269 228 FGYHQDGP-------RPVPFQTWNWKGIDLINAVERDP-RIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAA 299 (312)
T ss_pred EccCCCCC-------cccCHHHHhhcCCEEEEecccCc-cchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHH
Confidence 98653210 11122344566666666543322 223467899999999999986 356789999999999999
Q ss_pred HcCCC-cceEEE
Q 042784 341 FSSSN-IGKVVI 351 (356)
Q Consensus 341 ~~~~~-~gkvvi 351 (356)
.+++. .+|+++
T Consensus 300 ~~~~~~~~~~~~ 311 (312)
T cd08269 300 RRRPDGFIKGVI 311 (312)
T ss_pred HhCCCCceEEEe
Confidence 98865 578876
No 109
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=5.5e-33 Score=254.23 Aligned_cols=298 Identities=18% Similarity=0.126 Sum_probs=234.8
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
|++|++.+.+ .+.++++++.+.+. |.+.++||+||+.++++|++|.+...|.... ..++...++|++|+|
T Consensus 1 ~~~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V 70 (329)
T cd08298 1 MKAMVLEKPG---PIEENPLRLTEVPV----PEPGPGEVLIKVEACGVCRTDLHIVEGDLPP---PKLPLIPGHEIVGRV 70 (329)
T ss_pred CeEEEEecCC---CCCCCCceEEeccC----CCCCCCEEEEEEEEEeccHHHHHHHhCCCCC---CCCCccccccccEEE
Confidence 5677776542 11235788877755 5689999999999999999999988764321 223334445999999
Q ss_pred EEeccCCCCCCCCCEEEe------------------------------ccCCeeeEEeecCCcccccCCCCCCCCccccc
Q 042784 93 RVIRSKDSKYSDGDIVLR------------------------------AFLPVAEYSLLPCDLLTRKLDPASGIPFPDYL 142 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~------------------------------~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~a 142 (356)
+.+|+++.++++||+|++ ..|+|++|+.++.+.++.+ |+++++.+ +
T Consensus 71 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l---p~~~~~~~-~ 146 (329)
T cd08298 71 EAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPI---PEDYDDEE-A 146 (329)
T ss_pred EEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEEC---CCCCCHHH-h
Confidence 999999999999999973 1489999999999887554 99999998 7
Q ss_pred cccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhh
Q 042784 143 SSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMS 222 (356)
Q Consensus 143 a~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~ 222 (356)
+++++++.|||+++ +.++++++++|+|+| +|++|++++++++..|++|+++++++++.+.++ ++|++.++++.. .
T Consensus 147 ~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~- 221 (329)
T cd08298 147 APLLCAGIIGYRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELAR-ELGADWAGDSDD-L- 221 (329)
T ss_pred hHhhhhhHHHHHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHH-HhCCcEEeccCc-c-
Confidence 89999999999999 789999999999997 599999999999999999999999999999997 899987777653 1
Q ss_pred HHHHHHHHCCCCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEeccccc
Q 042784 223 FDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHM 301 (356)
Q Consensus 223 ~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (356)
.++++|+++++.+. ..++.++++++++|+++.+|.... .....+... +.++..+.+....
T Consensus 222 --------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~-~~~~~~i~~~~~~--- 282 (329)
T cd08298 222 --------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMS-------DIPAFDYEL-LWGEKTIRSVANL--- 282 (329)
T ss_pred --------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-------CCCccchhh-hhCceEEEEecCC---
Confidence 23579999998654 588999999999999998875321 001112222 3345555544322
Q ss_pred chHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 302 DRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 302 ~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
..+.++.++++++++.+++. .++|+++++++|++.+.+++..||+|+
T Consensus 283 --~~~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 283 --TRQDGEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred --CHHHHHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 23457889999999998874 578999999999999999999999874
No 110
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=4.2e-33 Score=251.57 Aligned_cols=292 Identities=22% Similarity=0.347 Sum_probs=236.3
Q ss_pred CCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEEEeccCCCCCCCCCEEEec----cCCeeeEE
Q 042784 44 DSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVLRA----FLPVAEYS 119 (356)
Q Consensus 44 p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~~~----~g~~a~~~ 119 (356)
|.+.+++|+||+.++++|+.|+..+.|.+... +.++...+++++|+|+++|++++++++||+|+.. .|+|++|+
T Consensus 3 p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~ 80 (303)
T cd08251 3 APPGPGEVRIQVRAFSLNFGDLLCVRGLYPTM--PPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLV 80 (303)
T ss_pred CCCCCCEEEEEEEEeecChHHHHHHCCCCCCC--CCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEE
Confidence 67899999999999999999999887654322 2233344558999999999999999999999932 28999999
Q ss_pred eecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCh
Q 042784 120 LLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSD 199 (356)
Q Consensus 120 ~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~ 199 (356)
.++.+.++.. |++++.++ +++++..+++||+++. ..++++|++|+|+|++|++|++++++++.+|++|+++++++
T Consensus 81 ~~~~~~~~~~---p~~~~~~~-aa~~~~~~~ta~~~l~-~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~ 155 (303)
T cd08251 81 TVPEDQVVRK---PASLSFEE-ACALPVVFLTVIDAFA-RAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSD 155 (303)
T ss_pred EccHHHeEEC---CCCCCHHH-HHHhHHHHHHHHHHHH-hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCH
Confidence 9999887555 99999998 7899999999999995 78899999999999999999999999999999999999899
Q ss_pred HHHHHHHHHhCCCceeecCChhhHHHHHHHHCC-CCceEEEECCchhhHHHHHHhcccCCEEEEEecccccccccccccc
Q 042784 200 DNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFP-NGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDG 278 (356)
Q Consensus 200 ~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~-~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 278 (356)
++.+.++ ++|++.++++.. .++.+.+.++++ +++|+++|++++.....++++++++|+++.+|...... . .
T Consensus 156 ~~~~~~~-~~g~~~~~~~~~-~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~-----~-~ 227 (303)
T cd08251 156 DKLEYLK-QLGVPHVINYVE-EDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKS-----A-P 227 (303)
T ss_pred HHHHHHH-HcCCCEEEeCCC-ccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCc-----c-C
Confidence 9999997 899998888876 577777887774 58999999999888889999999999999988754211 0 0
Q ss_pred hhhhhhhhccceEEEEEecccc----cchHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 279 VRNLLNMIGKEVKMEGFMIGSH----MDRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
.... ..+.+++.+....+... .....+.+.++++++.++.+++.....|++++++++++.+.+++..+|+++
T Consensus 228 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 228 SVDL-SVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred ccCh-hHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 0111 12334444444333221 123346688899999999998877789999999999999999888888874
No 111
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=6.5e-33 Score=258.66 Aligned_cols=297 Identities=19% Similarity=0.213 Sum_probs=231.0
Q ss_pred CeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCC--c--cCCCccCceeeeeEEEEEeccCCCCCCCCC
Q 042784 31 HLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGL--Y--FPQFNLNQVILAFGIARVIRSKDSKYSDGD 106 (356)
Q Consensus 31 ~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~--~--~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd 106 (356)
.+++++.+. |+++++||+||+.++++|++|.+...+...+. + ...++...+++++|+|+++|++++.+++||
T Consensus 38 ~~~~~~~~~----p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 113 (384)
T cd08265 38 ELRVEDVPV----PNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGD 113 (384)
T ss_pred CEEEEECCC----CCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCC
Confidence 588888865 78999999999999999999998876422111 0 122233444599999999999999999999
Q ss_pred EEEe----------------------------c-cCCeeeEEeecCCcccccCCCCCC-------CCccccccccCchhh
Q 042784 107 IVLR----------------------------A-FLPVAEYSLLPCDLLTRKLDPASG-------IPFPDYLSSLGIPGF 150 (356)
Q Consensus 107 ~V~~----------------------------~-~g~~a~~~~v~~~~~~~~i~~P~~-------~s~~~~aa~l~~~~~ 150 (356)
+|+. . .|+|++|+.++.+.++.. |++ ++.+ +|+++.+++
T Consensus 114 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~l---P~~~~~~~~~~~~~--~a~~~~~~~ 188 (384)
T cd08265 114 PVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEI---NELREIYSEDKAFE--AGALVEPTS 188 (384)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEEC---CccccccccCCCHH--HhhhhhHHH
Confidence 9983 1 589999999999887554 765 3444 467888999
Q ss_pred hHHHHHHHh-CCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeecCCh--hhHHHH
Q 042784 151 AAWVGIEVL-GQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSE--MSFDAA 226 (356)
Q Consensus 151 ta~~~l~~~-~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~--~~~~~~ 226 (356)
+||+++... +++++|++|+|+| +|++|++++++|+..|+ +|++++.++++.++++ ++|+++++++++. .++.+.
T Consensus 189 ta~~al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~~~~ 266 (384)
T cd08265 189 VAYNGLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAK-EMGADYVFNPTKMRDCLSGEK 266 (384)
T ss_pred HHHHHHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEEcccccccccHHHH
Confidence 999999655 6899999999996 59999999999999999 8999998888888888 8999888887641 267778
Q ss_pred HHHHCC-CCceEEEECCch--hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccch
Q 042784 227 LTKYFP-NGIDVYLDNVGG--KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDR 303 (356)
Q Consensus 227 i~~~~~-~~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (356)
++++++ .++|+|+||+|. ..+..++++++++|+++.+|..... .......+..+..++.+.....
T Consensus 267 v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~--------~~~~~~~~~~~~~~l~~~~~~~---- 334 (384)
T cd08265 267 VMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATT--------VPLHLEVLQVRRAQIVGAQGHS---- 334 (384)
T ss_pred HHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCC--------CcccHHHHhhCceEEEEeeccC----
Confidence 888774 589999999996 3788999999999999999865331 1112233445566666654321
Q ss_pred HHHHHHHHHHHHHcCCeeee--eeEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 304 FADFTVEMESYIKEGKIRSK--HVIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 304 ~~~~l~~~~~~~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
....++++++++.++.+.+. ++++|+++++++|++.+.++ ..+|+|+
T Consensus 335 ~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 335 GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 12457889999999999763 66789999999999997654 5788885
No 112
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=1.5e-32 Score=250.42 Aligned_cols=317 Identities=21% Similarity=0.263 Sum_probs=253.0
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
|+++.+.. .+.+..+++++.+. |.+++++++|||.++++|+.|.....|........|..+| ++++|+|
T Consensus 1 ~~~~~~~~-----~~~~~~~~~~~~~~----~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g--~e~~G~v 69 (325)
T TIGR02824 1 MKAIEITE-----PGGPEVLVLVEVPL----PVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILG--LEVAGEV 69 (325)
T ss_pred CceEEEcc-----CCCcccceEEeCCC----CCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCcc--ceeEEEE
Confidence 34555543 23446677777644 4689999999999999999998887754332211223444 5899999
Q ss_pred EEeccCCCCCCCCCEEEec--cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEE
Q 042784 93 RVIRSKDSKYSDGDIVLRA--FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFV 170 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~--~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV 170 (356)
+.+|+++.++++||+|+.. +|++++|+.++.+.++.. |++++... +++++.+++++|+++.+..++.++++++|
T Consensus 70 ~~vg~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~i---p~~~~~~~-~~~~~~~~~ta~~~~~~~~~~~~~~~vlv 145 (325)
T TIGR02824 70 VAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPV---PEGLSLVE-AAALPETFFTVWSNLFQRGGLKAGETVLI 145 (325)
T ss_pred EEeCCCCCCCCCCCEEEEccCCCcceeEEEecHHHcEeC---CCCCCHHH-HHhhhHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 9999999999999999932 289999999998877554 99999888 78999999999999888889999999999
Q ss_pred EcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCC-CCceEEEECCchhhHHH
Q 042784 171 SAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFP-NGIDVYLDNVGGKMLEA 249 (356)
Q Consensus 171 ~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~-~~~d~vld~~g~~~~~~ 249 (356)
+|++|++|.+++++++..|++|+++++++++.+.++ ++|.+.+++... .++.+.+++..+ +++|++++|+|...+..
T Consensus 146 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 223 (325)
T TIGR02824 146 HGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACE-ALGADIAINYRE-EDFVEVVKAETGGKGVDVILDIVGGSYLNR 223 (325)
T ss_pred EcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCc-hhHHHHHHHHcCCCCeEEEEECCchHHHHH
Confidence 999999999999999999999999999999998886 899887777765 567777877764 58999999999888889
Q ss_pred HHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccc-cc----hHHHHHHHHHHHHHcCCeeeee
Q 042784 250 VLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSH-MD----RFADFTVEMESYIKEGKIRSKH 324 (356)
Q Consensus 250 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~l~~~~~~~~~g~i~~~~ 324 (356)
++++++++|+++.+|...... . ..+...++.+++++.+...... .. .....+.++++++.++.+.+.+
T Consensus 224 ~~~~l~~~g~~v~~g~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 296 (325)
T TIGR02824 224 NIKALALDGRIVQIGFQGGRK------A-ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVI 296 (325)
T ss_pred HHHhhccCcEEEEEecCCCCc------C-CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCcc
Confidence 999999999999998754311 1 1233344578999988876542 11 1234567788999999988777
Q ss_pred eEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 325 VIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 325 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
+..+++++++++++.+.++...+|+|+++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 297 DKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred ccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 78899999999999999888889999864
No 113
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.4e-32 Score=249.30 Aligned_cols=316 Identities=19% Similarity=0.249 Sum_probs=246.3
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||++.+..+. ..+++++++.+. |.+.+++|+||+.++++|++|+....|.... ..++..+|+ +++|+|
T Consensus 1 ~~a~~~~~~~-----~~~~~~~~~~~~----~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~--e~~G~v 68 (325)
T cd08271 1 MKAWVLPKPG-----AALQLTLEEIEI----PGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA-WSYPHVPGV--DGAGVV 68 (325)
T ss_pred CeeEEEccCC-----CcceeEEeccCC----CCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCccccc--ceEEEE
Confidence 5777777542 124788988865 7789999999999999999999887764322 122344554 888999
Q ss_pred EEeccCCCCCCCCCEEEec-----cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCE
Q 042784 93 RVIRSKDSKYSDGDIVLRA-----FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSN 167 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~-----~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 167 (356)
+.+|++++.+++||+|+.. .|+|++|+.++.+.++.. |++++..+ ++.+.+.+.+|++++.+.+++++|++
T Consensus 69 ~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~i---p~~~~~~~-~a~~~~~~~~a~~~~~~~~~~~~g~~ 144 (325)
T cd08271 69 VAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPL---PDSLSFEE-AAALPCAGLTAYQALFKKLRIEAGRT 144 (325)
T ss_pred EEeCCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHHeEEC---CCCCCHHH-HHhhhhhHHHHHHHHHHhcCCCCCCE
Confidence 9999999999999999932 489999999999888555 99999988 78899999999999988889999999
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHC-CCCceEEEECCchhh
Q 042784 168 VFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYF-PNGIDVYLDNVGGKM 246 (356)
Q Consensus 168 VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~-~~~~d~vld~~g~~~ 246 (356)
|+|+|++|++|++++++++..|++|+++. ++++.+.++ .+|++.+++... .++.+.+.+.. ++++|.+++|+++..
T Consensus 145 vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~~~~~ 221 (325)
T cd08271 145 ILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK-SLGADHVIDYND-EDVCERIKEITGGRGVDAVLDTVGGET 221 (325)
T ss_pred EEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHH-HcCCcEEecCCC-ccHHHHHHHHcCCCCCcEEEECCCcHh
Confidence 99999989999999999999999998887 778888887 899988887765 56777787776 458999999999887
Q ss_pred HHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccc---cchHHHHHHHHHHHHHcCCeeee
Q 042784 247 LEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSH---MDRFADFTVEMESYIKEGKIRSK 323 (356)
Q Consensus 247 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~g~i~~~ 323 (356)
....+++++++|+++.++..... ............+++.+........ .....+.+.++++++.++.+.+.
T Consensus 222 ~~~~~~~l~~~G~~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 295 (325)
T cd08271 222 AAALAPTLAFNGHLVCIQGRPDA------SPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL 295 (325)
T ss_pred HHHHHHhhccCCEEEEEcCCCCC------cchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeec
Confidence 77899999999999988654321 0000001111222333332221111 12344667889999999999887
Q ss_pred eeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 324 HVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 324 ~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
....|+++++.++++.+.++...+|+|+++
T Consensus 296 ~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 296 VIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred cceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 677899999999999999888889999864
No 114
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=1.5e-32 Score=253.68 Aligned_cols=313 Identities=20% Similarity=0.228 Sum_probs=225.1
Q ss_pred CeEEEEeeccccCCC-CCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEEEeccCCC-CCCCCCEE
Q 042784 31 HLKLRSASVSLAIDS-IPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKDS-KYSDGDIV 108 (356)
Q Consensus 31 ~~~~~~~~~~~p~p~-~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~-~~~~Gd~V 108 (356)
.+++++.+++ .|. +.+++|+||+.++++|++|.....+........+..+| +|++|+|+++|++++ +|++||+|
T Consensus 12 ~~~~~~~~~~--~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g--~e~~G~V~~vG~~v~~~~~~Gd~V 87 (352)
T cd08247 12 PLTITTIKLP--LPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLG--RDYSGVIVKVGSNVASEWKVGDEV 87 (352)
T ss_pred cceeeccCCC--CCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccC--ceeEEEEEEeCcccccCCCCCCEE
Confidence 4566666663 343 59999999999999999998877542111101133344 589999999999998 89999999
Q ss_pred Eec-------cCCeeeEEeecCC----cccccCCCCCCCCccccccccCchhhhHHHHHHHhC-CCCCCCEEEEEcCCCh
Q 042784 109 LRA-------FLPVAEYSLLPCD----LLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLG-QPKSGSNVFVSAAAGG 176 (356)
Q Consensus 109 ~~~-------~g~~a~~~~v~~~----~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~VlV~g~~g~ 176 (356)
+.. .|+|++|+.++.. .++. + |+++++++ ++.++.++.|||+++...+ ++++|++|+|+|++|+
T Consensus 88 ~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~-l--P~~l~~~~-aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~ 163 (352)
T cd08247 88 CGIYPHPYGGQGTLSQYLLVDPKKDKKSITR-K--PENISLEE-AAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTS 163 (352)
T ss_pred EEeecCCCCCCceeeEEEEEccccccceeEE-C--CCCCCHHH-HHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCch
Confidence 932 4899999999987 4434 4 99999998 7899999999999998777 7999999999999999
Q ss_pred HHHHHHHHHHHC-CC-EEEEEeCChHHHHHHHHHhCCCceeecCChh---hHHHHHHHHC-CCCceEEEECCch-hhHHH
Q 042784 177 VGMFAGQLAKLK-GC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEM---SFDAALTKYF-PNGIDVYLDNVGG-KMLEA 249 (356)
Q Consensus 177 vG~~~i~la~~~-G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~---~~~~~i~~~~-~~~~d~vld~~g~-~~~~~ 249 (356)
+|.+++++|+.. |. +|+++. ++++.+.++ ++|+++++++++.. .+.+.++..+ ++++|++|||+|+ .....
T Consensus 164 vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~ 241 (352)
T cd08247 164 VGRFAIQLAKNHYNIGTVVGTC-SSRSAELNK-KLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPH 241 (352)
T ss_pred HHHHHHHHHHhcCCcceEEEEe-ChhHHHHHH-HhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHH
Confidence 999999999988 55 677776 566667776 89998888876522 2344444455 5689999999998 57788
Q ss_pred HHHhcc---cCCEEEEEeccccccccccc-cc--chhhhhhhhccceEEEEEecccc-cchHHHHHHHHHHHHHcCCeee
Q 042784 250 VLNHVN---VHARIILCGMISQYNKVWTE-RD--GVRNLLNMIGKEVKMEGFMIGSH-MDRFADFTVEMESYIKEGKIRS 322 (356)
Q Consensus 250 ~~~~l~---~~G~~v~~g~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~g~i~~ 322 (356)
++++++ ++|+++.++........... .. ........+.++.++........ .....+.++++++++.++.+++
T Consensus 242 ~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 321 (352)
T cd08247 242 INSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVKP 321 (352)
T ss_pred HHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeEe
Confidence 899999 99999987522210000000 00 00000011222222221111100 0011356788999999999998
Q ss_pred eeeEEeChhhHHHHHHHHHcCCCcceEEEEe
Q 042784 323 KHVIYYGVESFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 323 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
.+.++++++++++|++.+.+++..||+|+++
T Consensus 322 ~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 322 PIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred eeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 8778999999999999999998899999864
No 115
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=4.7e-32 Score=245.31 Aligned_cols=304 Identities=25% Similarity=0.360 Sum_probs=239.4
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
|+++++... +..+.+.+++.+. |.++++||+||+.++++|+.|+....|.........++...++++.|+|
T Consensus 1 ~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v 71 (309)
T cd05289 1 MKAVRIHEY-----GGPEVLELADVPT----PEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVV 71 (309)
T ss_pred CceEEEccc-----CCccceeecccCC----CCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEE
Confidence 467776643 2334566766644 5789999999999999999999988764321111222333445889999
Q ss_pred EEeccCCCCCCCCCEEEec-----cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCE
Q 042784 93 RVIRSKDSKYSDGDIVLRA-----FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSN 167 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~-----~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 167 (356)
+.+|+++..+++||+|+.. .|+|++|+.++...++.. |+++++.. ++.+++.+.+|++++....++.+|++
T Consensus 72 ~~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~---p~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~ 147 (309)
T cd05289 72 VAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALK---PANLSFEE-AAALPLAGLTAWQALFELGGLKAGQT 147 (309)
T ss_pred EeeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHHhccC---CCCCCHHH-HHhhhHHHHHHHHHHHhhcCCCCCCE
Confidence 9999999999999999932 589999999999877554 99999988 78889999999999987788999999
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchhhH
Q 042784 168 VFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKML 247 (356)
Q Consensus 168 VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~ 247 (356)
|+|+|++|++|++++++++..|++|++++.++ +.+.++ .+|...+++... .++.+ ...++++|.++||+|+...
T Consensus 148 vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~-~~g~~~~~~~~~-~~~~~---~~~~~~~d~v~~~~~~~~~ 221 (309)
T cd05289 148 VLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLR-SLGADEVIDYTK-GDFER---AAAPGGVDAVLDTVGGETL 221 (309)
T ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHH-HcCCCEEEeCCC-Cchhh---ccCCCCceEEEECCchHHH
Confidence 99999999999999999999999999988777 888887 899877887664 33433 2234579999999999988
Q ss_pred HHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcCCeeeeeeEE
Q 042784 248 EAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRSKHVIY 327 (356)
Q Consensus 248 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~~~~~ 327 (356)
..++++++++|+++.+|...... . ..+.+++.+........ .+.+.+++++++++.+.+.+++.
T Consensus 222 ~~~~~~l~~~g~~v~~g~~~~~~----------~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 285 (309)
T cd05289 222 ARSLALVKPGGRLVSIAGPPPAE----------Q--AAKRRGVRAGFVFVEPD----GEQLAELAELVEAGKLRPVVDRV 285 (309)
T ss_pred HHHHHHHhcCcEEEEEcCCCcch----------h--hhhhccceEEEEEeccc----HHHHHHHHHHHHCCCEEEeeccE
Confidence 99999999999999998754310 0 22445566655543221 46788899999999998887789
Q ss_pred eChhhHHHHHHHHHcCCCcceEEE
Q 042784 328 YGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 328 ~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
|+++++.++++.+.+++..+|+|+
T Consensus 286 ~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 286 FPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred EcHHHHHHHHHHHHhCCCCCcEeC
Confidence 999999999999998887888874
No 116
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=4.6e-32 Score=248.21 Aligned_cols=299 Identities=20% Similarity=0.209 Sum_probs=237.9
Q ss_pred eeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEE
Q 042784 14 KEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIAR 93 (356)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~ 93 (356)
|+++++..+ +.+++++.+. |.+.+++|+||+.++++|+.|.....|.... ..+|...++|++|+|+
T Consensus 1 ~~~~~~~~~-------~~~~~~~~~~----~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~ 66 (330)
T cd08245 1 KAAVVHAAG-------GPLEPEEVPV----PEPGPGEVLIKIEACGVCHTDLHAAEGDWGG---SKYPLVPGHEIVGEVV 66 (330)
T ss_pred CeEEEecCC-------CCceEEeccC----CCCCCCeEEEEEEEEeccHHHHHHHcCCCCC---CCCCcccCccceEEEE
Confidence 456666443 4788888866 6689999999999999999999988865422 1223334458999999
Q ss_pred EeccCCCCCCCCCEEEe------------------------------ccCCeeeEEeecCCcccccCCCCCCCCcccccc
Q 042784 94 VIRSKDSKYSDGDIVLR------------------------------AFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLS 143 (356)
Q Consensus 94 ~vg~~v~~~~~Gd~V~~------------------------------~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa 143 (356)
.+|++++++++||+|++ ..|+|++|+.++.+.+..+ |+++++++ ++
T Consensus 67 ~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~---p~~~~~~~-~~ 142 (330)
T cd08245 67 EVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLL---PDGLPLAQ-AA 142 (330)
T ss_pred EECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEEC---CCCCCHHH-hh
Confidence 99999999999999973 1478999999999887555 99999998 78
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhH
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 223 (356)
.+.+.+++||+++.. .++.++++|+|+|+ |++|++++++|+..|++|+++++++++.+.++ ++|++.++++.. .+.
T Consensus 143 ~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~ 218 (330)
T cd08245 143 PLLCAGITVYSALRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVDSGA-ELD 218 (330)
T ss_pred hhhhhHHHHHHHHHh-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCcEEeccCC-cch
Confidence 899999999999965 78999999999975 88999999999999999999999999999997 899888887654 222
Q ss_pred HHHHHHHCCCCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccc
Q 042784 224 DAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMD 302 (356)
Q Consensus 224 ~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (356)
... ..+++|+++||++. .....++++++++|+++.++...... .......++.++.++.++....
T Consensus 219 ~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~--- 284 (330)
T cd08245 219 EQA----AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPP-------FSPDIFPLIMKRQSIAGSTHGG--- 284 (330)
T ss_pred HHh----ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCc-------cccchHHHHhCCCEEEEeccCC---
Confidence 222 22479999999775 67889999999999999998653311 1112233566777777765532
Q ss_pred hHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 303 RFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 303 ~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
...++++++++.++.+.+ ....+++++++++++.+.+++..||+|+
T Consensus 285 --~~~~~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 285 --RADLQEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred --HHHHHHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 356788899999999876 4468999999999999999998899875
No 117
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=1.3e-31 Score=243.80 Aligned_cols=314 Identities=22% Similarity=0.280 Sum_probs=250.3
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCC-CCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIP-DHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGI 91 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~-~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~ 91 (356)
|++++++.. +.+..+++.+.+ |.+. +++++||+.++++|+.|.....|.......++..+|+ +++|+
T Consensus 1 ~~~~~~~~~-----~~~~~~~~~~~~-----~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~--e~~G~ 68 (323)
T cd08241 1 MKAVVCKEL-----GGPEDLVLEEVP-----PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGS--EVAGV 68 (323)
T ss_pred CeEEEEecC-----CCcceeEEecCC-----CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccc--eeEEE
Confidence 456676643 234567776652 3344 6999999999999999998877643222223344555 88899
Q ss_pred EEEeccCCCCCCCCCEEEec---cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEE
Q 042784 92 ARVIRSKDSKYSDGDIVLRA---FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNV 168 (356)
Q Consensus 92 v~~vg~~v~~~~~Gd~V~~~---~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~V 168 (356)
|+.+|+++..+++||+|+ + .|++++|+.++.+.++.. |++++..+ ++++...+.+|++++....++.++++|
T Consensus 69 v~~~g~~~~~~~~G~~V~-~~~~~~~~~~~~~~~~~~~~~i---p~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~v 143 (323)
T cd08241 69 VEAVGEGVTGFKVGDRVV-ALTGQGGFAEEVVVPAAAVFPL---PDGLSFEE-AAALPVTYGTAYHALVRRARLQPGETV 143 (323)
T ss_pred EEEeCCCCCCCCCCCEEE-EecCCceeEEEEEcCHHHceeC---CCCCCHHH-HhhhhhHHHHHHHHHHHhcCCCCCCEE
Confidence 999999999999999999 5 579999999998877554 89999888 688999999999999877889999999
Q ss_pred EEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCC-CCceEEEECCchhhH
Q 042784 169 FVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFP-NGIDVYLDNVGGKML 247 (356)
Q Consensus 169 lV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~-~~~d~vld~~g~~~~ 247 (356)
+|+|++|++|++++++|+..|++|++++.++++.+.++ .+|+..+++... .++.+.+.+.++ +++|.++||+|...+
T Consensus 144 li~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~i~~~~~~~~~d~v~~~~g~~~~ 221 (323)
T cd08241 144 LVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGADHVIDYRD-PDLRERVKALTGGRGVDVVYDPVGGDVF 221 (323)
T ss_pred EEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-HcCCceeeecCC-ccHHHHHHHHcCCCCcEEEEECccHHHH
Confidence 99999999999999999999999999999999999998 789887787765 567778888764 589999999999888
Q ss_pred HHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccch----HHHHHHHHHHHHHcCCeeee
Q 042784 248 EAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDR----FADFTVEMESYIKEGKIRSK 323 (356)
Q Consensus 248 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~g~i~~~ 323 (356)
..++++++++|+++.+|...... ........+.+++++.+.....+... ..+.++++++++.++.+.+.
T Consensus 222 ~~~~~~~~~~g~~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (323)
T cd08241 222 EASLRSLAWGGRLLVIGFASGEI-------PQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPH 294 (323)
T ss_pred HHHHHhhccCCEEEEEccCCCCc-------CcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccc
Confidence 89999999999999998743311 00112234567888888765543322 23667889999999999887
Q ss_pred eeEEeChhhHHHHHHHHHcCCCcceEEEE
Q 042784 324 HVIYYGVESFLESLGSLFSSSNIGKVVIQ 352 (356)
Q Consensus 324 ~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 352 (356)
++..|+++++.++++.+.++...+|++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 295 VSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred cceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 77899999999999999888888888863
No 118
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.5e-31 Score=245.29 Aligned_cols=312 Identities=24% Similarity=0.342 Sum_probs=244.3
Q ss_pred CCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEEEeccCCCCCCCCCE
Q 042784 28 TSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDI 107 (356)
Q Consensus 28 ~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~ 107 (356)
.++.+.+.+.+. |.+.+++|+||+.++++|+.|.....|........+..+| ++++|+|+.+|+++.++++||+
T Consensus 10 ~~~~~~~~~~~~----~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g--~e~~G~v~~~g~~~~~~~~G~~ 83 (337)
T cd08275 10 GLDKLKVEKEAL----PEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPG--FECAGTVEAVGEGVKDFKVGDR 83 (337)
T ss_pred CccceEEEecCC----CCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCc--ceeEEEEEEECCCCcCCCCCCE
Confidence 345788877654 5688999999999999999999988764322212233444 4889999999999999999999
Q ss_pred EEecc---CCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHH
Q 042784 108 VLRAF---LPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQL 184 (356)
Q Consensus 108 V~~~~---g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~l 184 (356)
|+ ++ |+|++|+.++.+.+.+. |++++.++ ++.+.+.+.+||+++...+++++|++|+|+|++|++|++++++
T Consensus 84 V~-~~~~~~~~~~~~~~~~~~~~~i---p~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~ 158 (337)
T cd08275 84 VM-GLTRFGGYAEVVNVPADQVFPL---PDGMSFEE-AAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQL 158 (337)
T ss_pred EE-EecCCCeeeeEEEecHHHeEEC---CCCCCHHH-HhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHH
Confidence 99 53 89999999998887554 99999988 7889999999999998888999999999999999999999999
Q ss_pred HHHC-CCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchhhHHHHHHhcccCCEEEEE
Q 042784 185 AKLK-GCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 185 a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~ 263 (356)
|+.. +..++... .+++.+.++ .+|.+.++++.. .++.+.++..+++++|+++||+|+.....++++++++|+++.+
T Consensus 159 a~~~~~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~ 235 (337)
T cd08275 159 CKTVPNVTVVGTA-SASKHEALK-ENGVTHVIDYRT-QDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVY 235 (337)
T ss_pred HHHccCcEEEEeC-CHHHHHHHH-HcCCcEEeeCCC-CcHHHHHHHHhCCCceEEEECCcHHHHHHHHHhhccCcEEEEE
Confidence 9998 44444332 455778887 799988888776 6777788877767899999999998888999999999999999
Q ss_pred eccccccccccc---------ccchhhhhhhhccceEEEEEecccccc---hHHHHHHHHHHHHHcCCeeeeeeEEeChh
Q 042784 264 GMISQYNKVWTE---------RDGVRNLLNMIGKEVKMEGFMIGSHMD---RFADFTVEMESYIKEGKIRSKHVIYYGVE 331 (356)
Q Consensus 264 g~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~g~i~~~~~~~~~~~ 331 (356)
|........... .........++.+++++.++....... .....+.++++++.++.+.+..+..|+++
T Consensus 236 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (337)
T cd08275 236 GAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFE 315 (337)
T ss_pred eecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCceeeEEcHH
Confidence 875432100000 000112234577888888876543221 22345788899999999988777889999
Q ss_pred hHHHHHHHHHcCCCcceEEEEe
Q 042784 332 SFLESLGSLFSSSNIGKVVIQV 353 (356)
Q Consensus 332 ~~~~a~~~~~~~~~~gkvvi~~ 353 (356)
+++++++.+.++...+|+++++
T Consensus 316 ~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 316 EVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHHHHcCCCcceEEEeC
Confidence 9999999999888889999864
No 119
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=2.7e-31 Score=240.41 Aligned_cols=272 Identities=20% Similarity=0.216 Sum_probs=216.7
Q ss_pred eeeEEEecccCCCCCCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEE
Q 042784 13 SKEWYISAYASDGVPTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIA 92 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v 92 (356)
||+|+... +.++.+++++++. |.+.+++|+|||.++++|+.|.....|.... ...|..+| .+++|+|
T Consensus 1 ~~~~~~~~------~~~~~~~~~~~~~----p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~-~~~p~~~G--~e~~G~V 67 (306)
T cd08258 1 MKALVKTG------PGPGNVELREVPE----PEPGPGEVLIKVAAAGICGSDLHIYKGDYDP-VETPVVLG--HEFSGTI 67 (306)
T ss_pred CeeEEEec------CCCCceEEeecCC----CCCCCCeEEEEEEEEEechhhHHHHcCCCCc-CCCCeeec--cceEEEE
Confidence 45676553 2346789988865 7789999999999999999999888764321 12233444 4889999
Q ss_pred EEeccCCCCCCCCCEEEec------------------------------cCCeeeEEeecCCcccccCCCCCCCCccccc
Q 042784 93 RVIRSKDSKYSDGDIVLRA------------------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYL 142 (356)
Q Consensus 93 ~~vg~~v~~~~~Gd~V~~~------------------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~a 142 (356)
+.+|++++.+++||+|+.- .|+|++|+.++.+.++++ |+++++++ +
T Consensus 68 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l---p~~~~~~~-a 143 (306)
T cd08258 68 VEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHEL---PENLSLEA-A 143 (306)
T ss_pred EEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEEC---cCCCCHHH-H
Confidence 9999999999999999831 389999999999888555 99999988 4
Q ss_pred cccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe--CChHHHHHHHHHhCCCceeecCCh
Q 042784 143 SSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGST--GSDDNVKLLKEEFGYDDAFNYNSE 220 (356)
Q Consensus 143 a~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~--~s~~~~~~~~~~~g~~~v~~~~~~ 220 (356)
+ ++..+.+||+++...++++++++|+|.| +|++|.+++++|+..|++|++++ .++++.++++ ++|++++ ++..
T Consensus 144 a-~~~~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~-~~g~~~~-~~~~- 218 (306)
T cd08258 144 A-LTEPLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAK-ELGADAV-NGGE- 218 (306)
T ss_pred H-hhchHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH-HhCCccc-CCCc-
Confidence 4 8888999999998888999999999977 69999999999999999988763 3455777777 8999877 7765
Q ss_pred hhHHHHHHHHCC-CCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecc
Q 042784 221 MSFDAALTKYFP-NGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIG 298 (356)
Q Consensus 221 ~~~~~~i~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (356)
.++.+.+.+.++ +++|++|||+|. ..+...+++++++|+++.+|..... ....+...++.+++++.++..+
T Consensus 219 ~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-------~~~~~~~~~~~~~~~i~g~~~~ 291 (306)
T cd08258 219 EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPL-------AASIDVERIIQKELSVIGSRSS 291 (306)
T ss_pred CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCC-------CcccCHHHHhhcCcEEEEEecC
Confidence 678888887764 589999999975 5888999999999999999986521 0122445567799999998876
Q ss_pred cccchHHHHHHHHHHHHHcC
Q 042784 299 SHMDRFADFTVEMESYIKEG 318 (356)
Q Consensus 299 ~~~~~~~~~l~~~~~~~~~g 318 (356)
+. ++++++++++++|
T Consensus 292 ~~-----~~~~~~~~~~~~~ 306 (306)
T cd08258 292 TP-----ASWETALRLLASG 306 (306)
T ss_pred ch-----HhHHHHHHHHhcC
Confidence 53 4578888888765
No 120
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=100.00 E-value=1.8e-31 Score=239.08 Aligned_cols=284 Identities=21% Similarity=0.298 Sum_probs=232.2
Q ss_pred CcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEEEeccCCCCCCCCCEEEecc--CCeeeEEeecCCcc
Q 042784 49 HHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVLRAF--LPVAEYSLLPCDLL 126 (356)
Q Consensus 49 ~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~~~~--g~~a~~~~v~~~~~ 126 (356)
+||+||+.++++|++|++...|.. ...+..+| ++++|+|+++|+++.++++||+|+ ++ |+|++|+.++.+.+
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~---~~~~~~~g--~e~~G~v~~~g~~~~~~~~Gd~V~-~~~~g~~~~~~~~~~~~~ 74 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL---PGDETPLG--LECSGIVTRVGSGVTGLKVGDRVM-GLAPGAFATHVRVDARLV 74 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC---CCCCCccc--eeeeEEEEeecCCccCCCCCCEEE-EEecCcccceEEechhhe
Confidence 589999999999999999887643 12233444 589999999999999999999999 54 89999999999887
Q ss_pred cccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 042784 127 TRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLK 206 (356)
Q Consensus 127 ~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~ 206 (356)
+.. |+++++.+ ++.+++++.++|+++.+..++++|++|+|+|++|++|++++++++..|++|++++.++++.+.++
T Consensus 75 ~~~---p~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 150 (293)
T cd05195 75 VKI---PDSLSFEE-AATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR 150 (293)
T ss_pred EeC---CCCCCHHH-HhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 555 89999988 78888999999999988889999999999999999999999999999999999998889999998
Q ss_pred HHhC--CCceeecCChhhHHHHHHHHC-CCCceEEEECCchhhHHHHHHhcccCCEEEEEecccccccccccccchhhhh
Q 042784 207 EEFG--YDDAFNYNSEMSFDAALTKYF-PNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLL 283 (356)
Q Consensus 207 ~~~g--~~~v~~~~~~~~~~~~i~~~~-~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 283 (356)
.+| ++.++++.. .++.+.+++.+ ++++|.++||+|+..+..++++++++|+++.+|...... ..... .
T Consensus 151 -~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~------~~~~~-~ 221 (293)
T cd05195 151 -ELGGPVDHIFSSRD-LSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILS------NSKLG-M 221 (293)
T ss_pred -HhCCCcceEeecCc-hhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeecccccc------CCccc-h
Confidence 677 677788765 57778888876 458999999999999999999999999999998754311 00011 1
Q ss_pred hhhccceEEEEEeccccc----chHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 284 NMIGKEVKMEGFMIGSHM----DRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
..+.+++.+....+.... ....+.+.++++++.++.+.+..+..+++++++++++.+..++..+|+|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 222 RPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred hhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 224456666665544321 12345678899999999998888888999999999999998888888874
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.9e-31 Score=239.96 Aligned_cols=299 Identities=24% Similarity=0.279 Sum_probs=225.8
Q ss_pred CCCCe--EEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCc--cCCCccCceeeeeEEEEEeccCCCCCC
Q 042784 28 TSDHL--KLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLY--FPQFNLNQVILAFGIARVIRSKDSKYS 103 (356)
Q Consensus 28 ~~~~~--~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~--~~~~~~g~~~~~~G~v~~vg~~v~~~~ 103 (356)
++.++ ++++.++ |.+.++||+|++.++++|+.|.+...|...... ..+..+| +|+.|+|+++|+++..++
T Consensus 8 ~~~~~~~~~~~~~~----~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g--~e~~G~v~~~G~~v~~~~ 81 (319)
T cd08267 8 SPEVLLLLEVEVPI----PTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPG--MDFAGEVVAVGSGVTRFK 81 (319)
T ss_pred ChhhhhhccccCCC----CCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCccc--ceeeEEEEEeCCCCCCCC
Confidence 33444 6776654 678999999999999999999998876432110 1223344 488999999999999999
Q ss_pred CCCEEEec-----cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHH
Q 042784 104 DGDIVLRA-----FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVG 178 (356)
Q Consensus 104 ~Gd~V~~~-----~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG 178 (356)
+||+|+.. .|+|++|+.++.+.++.. |++++.++ ++.+++.+.+||+++....++++|++|+|+|++|++|
T Consensus 82 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~i---p~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g 157 (319)
T cd08267 82 VGDEVFGRLPPKGGGALAEYVVAPESGLAKK---PEGVSFEE-AAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVG 157 (319)
T ss_pred CCCEEEEeccCCCCceeeEEEEechhheEEC---CCCCCHHH-HHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHH
Confidence 99999932 289999999999887554 99999988 7899999999999998888899999999999999999
Q ss_pred HHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHC-CCCceEEEECCchh--hHHHHHHhcc
Q 042784 179 MFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYF-PNGIDVYLDNVGGK--MLEAVLNHVN 255 (356)
Q Consensus 179 ~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~-~~~~d~vld~~g~~--~~~~~~~~l~ 255 (356)
++++++|+..|++|++++.+ ++.+.++ ++|.+.++++.. .++. ...+ ++++|++++|+|+. .....+..++
T Consensus 158 ~~~~~la~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~-~~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~ 231 (319)
T cd08267 158 TFAVQIAKALGAHVTGVCST-RNAELVR-SLGADEVIDYTT-EDFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALK 231 (319)
T ss_pred HHHHHHHHHcCCEEEEEeCH-HHHHHHH-HcCCCEeecCCC-CCcc---hhccCCCCCcEEEECCCchHHHHHHhhhccC
Confidence 99999999999999998854 8888887 899988887664 3333 3333 45899999999853 3344444599
Q ss_pred cCCEEEEEecccccccccccccchhhhhh-hhccceEEEEEecccccchHHHHHHHHHHHHHcCCeeeeeeEEeChhhHH
Q 042784 256 VHARIILCGMISQYNKVWTERDGVRNLLN-MIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEGKIRSKHVIYYGVESFL 334 (356)
Q Consensus 256 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~ 334 (356)
++|+++.+|........ ......... ...+.+.. .... .. .+.+.++++++.++.+.+.++++|++++++
T Consensus 232 ~~g~~i~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~---~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~ 302 (319)
T cd08267 232 PGGRYVSVGGGPSGLLL---VLLLLPLTLGGGGRRLKF--FLAK---PN-AEDLEQLAELVEEGKLKPVIDSVYPLEDAP 302 (319)
T ss_pred CCCEEEEeccccccccc---cccccchhhccccceEEE--EEec---CC-HHHHHHHHHHHHCCCeeeeeeeEEcHHHHH
Confidence 99999999875432100 000000111 11122222 1111 11 567888999999999998888899999999
Q ss_pred HHHHHHHcCCCcceEEE
Q 042784 335 ESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 335 ~a~~~~~~~~~~gkvvi 351 (356)
+|++.+.+++..+|+++
T Consensus 303 ~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 303 EAYRRLKSGRARGKVVI 319 (319)
T ss_pred HHHHHHhcCCCCCcEeC
Confidence 99999998888888874
No 122
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=100.00 E-value=3.3e-30 Score=230.62 Aligned_cols=280 Identities=22% Similarity=0.317 Sum_probs=227.0
Q ss_pred EEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEEEeccCCCCCCCCCEEEec-cCCeeeEEeecCCcccccCC
Q 042784 53 VETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVLRA-FLPVAEYSLLPCDLLTRKLD 131 (356)
Q Consensus 53 Vkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~~~-~g~~a~~~~v~~~~~~~~i~ 131 (356)
||+.++++|+.|.+...|.+ ..+..+|+ +++|+|+.+|+++..+++||+|+.. .|+|++|+.++.+.++..
T Consensus 2 i~v~~~~i~~~d~~~~~g~~----~~~~~~g~--e~~G~v~~~G~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~~~~~-- 73 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLL----PGEAVLGG--ECAGVVTRVGPGVTGLAVGDRVMGLAPGSFATYVRTDARLVVPI-- 73 (288)
T ss_pred eeEEEEecCHHHHHHhcCCC----CCCCCCCc--eeEEEEEeeCCCCcCCCCCCEEEEEcCCceeeEEEccHHHeEEC--
Confidence 79999999999999887642 22345554 8899999999999999999999932 589999999999887555
Q ss_pred CCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC
Q 042784 132 PASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGY 211 (356)
Q Consensus 132 ~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~ 211 (356)
|+++++++ ++++.+.+.++|+++.+...+.+|++|+|+|++|++|++++++++..|++|+++++++++.+.++ ++|+
T Consensus 74 -p~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~ 150 (288)
T smart00829 74 -PDGLSFEE-AATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR-ELGI 150 (288)
T ss_pred -CCCCCHHH-HHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCC
Confidence 99999998 78999999999999977888999999999999999999999999999999999999999999997 8998
Q ss_pred --CceeecCChhhHHHHHHHHCC-CCceEEEECCchhhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhcc
Q 042784 212 --DDAFNYNSEMSFDAALTKYFP-NGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGK 288 (356)
Q Consensus 212 --~~v~~~~~~~~~~~~i~~~~~-~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 288 (356)
+.++++.. .++.+.+.+..+ +++|.++|++|+..+..++++++++|+++.+|...... . ...+... +.+
T Consensus 151 ~~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~-----~-~~~~~~~-~~~ 222 (288)
T smart00829 151 PDDHIFSSRD-LSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRD-----N-SQLGMAP-FRR 222 (288)
T ss_pred ChhheeeCCC-ccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCcc-----c-cccchhh-hcC
Confidence 77888776 567777877664 48999999999888889999999999999998753211 0 0111222 456
Q ss_pred ceEEEEEeccccc---chHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 289 EVKMEGFMIGSHM---DRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 289 ~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
++++....+.... ....+.+.++++++.++.+.+...+.|+++++.++++.+..++..+|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 223 NVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred CceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 6776666543211 12335577888999999888766678999999999999998887788774
No 123
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.97 E-value=7.6e-30 Score=227.92 Aligned_cols=228 Identities=17% Similarity=0.164 Sum_probs=183.4
Q ss_pred eeeeeEEEEEeccCCC------CCCCCCEEEec------------------------------------cCCeeeEEeec
Q 042784 85 VILAFGIARVIRSKDS------KYSDGDIVLRA------------------------------------FLPVAEYSLLP 122 (356)
Q Consensus 85 ~~~~~G~v~~vg~~v~------~~~~Gd~V~~~------------------------------------~g~~a~~~~v~ 122 (356)
|+|++|+|+++|++|+ .+++||||++. .|+|+||++++
T Consensus 3 GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~v~ 82 (280)
T TIGR03366 3 GHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCHLP 82 (280)
T ss_pred CcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEEec
Confidence 3489999999999999 89999999730 27899999999
Q ss_pred CC-cccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCChH
Q 042784 123 CD-LLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCK-VVGSTGSDD 200 (356)
Q Consensus 123 ~~-~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~-V~~~~~s~~ 200 (356)
++ .++++ |+++++++ ++.+.+.+.|||+++.. ....+|++|+|+|+ |++|++++|+||.+|++ |++++.+++
T Consensus 83 ~~~~~~~l---P~~~~~~~-aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~ 156 (280)
T TIGR03366 83 AGTAIVPV---PDDLPDAV-AAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPD 156 (280)
T ss_pred CCCcEEEC---CCCCCHHH-hhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence 87 46444 99999998 78889999999999964 45569999999986 99999999999999995 999988999
Q ss_pred HHHHHHHHhCCCceeecCChhhHHHHHHHHC-CCCceEEEECCchh-hHHHHHHhcccCCEEEEEecccccccccccccc
Q 042784 201 NVKLLKEEFGYDDAFNYNSEMSFDAALTKYF-PNGIDVYLDNVGGK-MLEAVLNHVNVHARIILCGMISQYNKVWTERDG 278 (356)
Q Consensus 201 ~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~-~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 278 (356)
|.++++ ++|++.++++.+ ..+.+++++ +.++|++||++|.. .++.++++++++|+++.+|...... ..
T Consensus 157 r~~~a~-~~Ga~~~i~~~~---~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~------~~ 226 (280)
T TIGR03366 157 RRELAL-SFGATALAEPEV---LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGG------PV 226 (280)
T ss_pred HHHHHH-HcCCcEecCchh---hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCC------ce
Confidence 999998 899998888653 345566666 45899999999875 7899999999999999999753211 11
Q ss_pred hhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHHcC--Ce--eeeeeEEeChhhH
Q 042784 279 VRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIKEG--KI--RSKHVIYYGVESF 333 (356)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g--~i--~~~~~~~~~~~~~ 333 (356)
..+...++.|++++.++...+ .+.++++++++.++ ++ ++.++++|+++|+
T Consensus 227 ~i~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 227 ALDPEQVVRRWLTIRGVHNYE-----PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred eeCHHHHHhCCcEEEecCCCC-----HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 234556788999998875432 24578888999874 33 3567888999873
No 124
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.97 E-value=2.4e-28 Score=216.99 Aligned_cols=234 Identities=26% Similarity=0.303 Sum_probs=191.7
Q ss_pred cEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEEEeccCCCCCCCCCEEEec------------------
Q 042784 50 HVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVLRA------------------ 111 (356)
Q Consensus 50 eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~~~------------------ 111 (356)
||+|||.++++|+.|.....|........+..+| ++++|+|+++|++++.+++||+|+..
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G--~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~ 78 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILG--HEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGG 78 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccc--cccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCC
Confidence 6899999999999999998875431112234445 48999999999999999999999931
Q ss_pred -------cCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHH
Q 042784 112 -------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQL 184 (356)
Q Consensus 112 -------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~l 184 (356)
.|++++|+.++.+.++.+ |+++++++ ++.++.++.+||+++.....+.++++|+|+|+++ +|++++++
T Consensus 79 ~~~~~~~~g~~~~~~~v~~~~~~~i---p~~~~~~~-a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~ 153 (271)
T cd05188 79 GILGEGLDGGFAEYVVVPADNLVPL---PDGLSLEE-AALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQL 153 (271)
T ss_pred CEeccccCCcceEEEEechHHeEEC---CCCCCHHH-hhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHH
Confidence 478999999999888555 99999998 7888899999999998877779999999999855 99999999
Q ss_pred HHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCch-hhHHHHHHhcccCCEEEEE
Q 042784 185 AKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGG-KMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 185 a~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~ 263 (356)
++..|.+|+++++++++.+.++ .+|++.++++.+ .++.+.+....++++|+++++++. ..+..++++++++|+++.+
T Consensus 154 a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~ 231 (271)
T cd05188 154 AKAAGARVIVTDRSDEKLELAK-ELGADHVIDYKE-EDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVV 231 (271)
T ss_pred HHHcCCeEEEEcCCHHHHHHHH-HhCCceeccCCc-CCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEE
Confidence 9999999999999999999998 889888888765 455555552234689999999998 7889999999999999999
Q ss_pred ecccccccccccccchhhhhhhhccceEEEEEeccc
Q 042784 264 GMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGS 299 (356)
Q Consensus 264 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (356)
|...... ........+.+++++.++....
T Consensus 232 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 260 (271)
T cd05188 232 GGTSGGP-------PLDDLRRLLFKELTIIGSTGGT 260 (271)
T ss_pred ccCCCCC-------CcccHHHHHhcceEEEEeecCC
Confidence 8765421 1112345577889998887654
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.97 E-value=6.3e-29 Score=239.72 Aligned_cols=303 Identities=20% Similarity=0.262 Sum_probs=247.4
Q ss_pred CCCCCeEEEEeeccccCCCCCCCcEEEEEEEEEeChhhhhhhcCCCCCCccC------CCccCceeeeeEEEEEeccCCC
Q 042784 27 PTSDHLKLRSASVSLAIDSIPDHHVAVETLWISIDPYLRATMTGTNDGLYFP------QFNLNQVILAFGIARVIRSKDS 100 (356)
Q Consensus 27 ~~~~~~~~~~~~~~~p~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~------~~~~g~~~~~~G~v~~vg~~v~ 100 (356)
+.-..++|.+.+.... .+..++.=+--|.|+.||..|+....|.......| ...+|. |++|+
T Consensus 1424 GDlsSlrWies~~~~a-~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGm--EFsGR--------- 1491 (2376)
T KOG1202|consen 1424 GDLSSLRWIESPLRHA-QPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGM--EFSGR--------- 1491 (2376)
T ss_pred ccccceeeeecchhhc-CCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheece--eeccc---------
Confidence 3456778888765421 24467777889999999999999998865333211 123333 55554
Q ss_pred CCCCCCEEEecc---CCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChH
Q 042784 101 KYSDGDIVLRAF---LPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGV 177 (356)
Q Consensus 101 ~~~~Gd~V~~~~---g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~v 177 (356)
.+-|.||+ +. -++++.+.++.+.+..+ |.+.++++ |++.|+-|.|||+||...+..++|+++|||+++|++
T Consensus 1492 -d~~GrRvM-~mvpAksLATt~l~~rd~lWev---P~~WTlee-AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGV 1565 (2376)
T KOG1202|consen 1492 -DASGRRVM-GMVPAKSLATTVLASRDFLWEV---PSKWTLEE-ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGV 1565 (2376)
T ss_pred -cCCCcEEE-EeeehhhhhhhhhcchhhhhhC---Ccccchhh-cccCceEeeeehhhhhhhccccCCcEEEEecCCCch
Confidence 56799999 54 67899999998888665 99999999 899999999999999989999999999999999999
Q ss_pred HHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC---CCceeecCChhhHHHHHHHHC-CCCceEEEECCchhhHHHHHHh
Q 042784 178 GMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFG---YDDAFNYNSEMSFDAALTKYF-PNGIDVYLDNVGGKMLEAVLNH 253 (356)
Q Consensus 178 G~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g---~~~v~~~~~~~~~~~~i~~~~-~~~~d~vld~~g~~~~~~~~~~ 253 (356)
|+++|.+|.+.|++|+.++.|.++++++.+.|. ...+-|.++ .+|+..+...| |+|+|+|++....+.++.+++|
T Consensus 1566 GQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRd-tsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRC 1644 (2376)
T KOG1202|consen 1566 GQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRD-TSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRC 1644 (2376)
T ss_pred hHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhccccccc-ccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHH
Confidence 999999999999999999999999999987554 345556666 78998888877 6699999999999999999999
Q ss_pred cccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHH----cCCeeeeeeEEeC
Q 042784 254 VNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIK----EGKIRSKHVIYYG 329 (356)
Q Consensus 254 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~g~i~~~~~~~~~ 329 (356)
|+.+|++..+|...-++ +.......|.+|.+++|.-+.+..+.-.+...++..+++ +|.++|+.+.+|+
T Consensus 1645 La~~GRFLEIGKfDLSq-------NspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~ 1717 (2376)
T KOG1202|consen 1645 LALHGRFLEIGKFDLSQ-------NSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFH 1717 (2376)
T ss_pred HHhcCeeeeecceeccc-------CCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceecccccccc
Confidence 99999999999755422 223566789999999999888777655555555555554 5678999999999
Q ss_pred hhhHHHHHHHHHcCCCcceEEEEecC
Q 042784 330 VESFLESLGSLFSSSNIGKVVIQVKA 355 (356)
Q Consensus 330 ~~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (356)
-+++++||++|.+++..||||+++..
T Consensus 1718 ~~qvE~AFRfMasGKHIGKVvikvr~ 1743 (2376)
T KOG1202|consen 1718 GQQVEDAFRFMASGKHIGKVVIKVRA 1743 (2376)
T ss_pred HHHHHHHHHHHhccCccceEEEEEcc
Confidence 99999999999999999999999853
No 126
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=3.3e-27 Score=210.80 Aligned_cols=253 Identities=23% Similarity=0.242 Sum_probs=196.3
Q ss_pred CCccCCCccCceeeeeEEEEEeccCCCCCCCCCEEEeccCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHH
Q 042784 74 GLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVLRAFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAW 153 (356)
Q Consensus 74 ~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~~~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~ 153 (356)
+..+-++|...++|++|+|+++|++++++++||+|+ ++++|++|+.++.+.++.+ |+++++++ ++.+ +.+++||
T Consensus 14 ~~~~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~-~~~~~~~~~~v~~~~~~~i---p~~l~~~~-aa~~-~~~~ta~ 87 (277)
T cd08255 14 GTEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVF-CFGPHAERVVVPANLLVPL---PDGLPPER-AALT-ALAATAL 87 (277)
T ss_pred cCccCcCCcccCcceeEEEEEeCCCCCCCCCCCEEE-ecCCcceEEEcCHHHeeEC---cCCCCHHH-hHHH-HHHHHHH
Confidence 333445555666699999999999999999999999 8889999999999887555 99999988 5666 8899999
Q ss_pred HHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHhC-CCceeecCChhhHHHHHHHHC
Q 042784 154 VGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCK-VVGSTGSDDNVKLLKEEFG-YDDAFNYNSEMSFDAALTKYF 231 (356)
Q Consensus 154 ~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~-V~~~~~s~~~~~~~~~~~g-~~~v~~~~~~~~~~~~i~~~~ 231 (356)
+++. .+++++|++++|+|+ |++|++++++|+.+|++ |+++++++++.++++ ++| ++.++++.. . ...
T Consensus 88 ~~~~-~~~~~~g~~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~--~------~~~ 156 (277)
T cd08255 88 NGVR-DAEPRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAARRELAE-ALGPADPVAADTA--D------EIG 156 (277)
T ss_pred HHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHH-HcCCCccccccch--h------hhc
Confidence 9985 788999999999974 99999999999999997 999999999999888 888 454444321 1 123
Q ss_pred CCCceEEEECCch-hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccc-------h
Q 042784 232 PNGIDVYLDNVGG-KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMD-------R 303 (356)
Q Consensus 232 ~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 303 (356)
++++|++|||++. .....++++++++|+++.+|..... . . .....+..+.+++.+........ .
T Consensus 157 ~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~------~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (277)
T cd08255 157 GRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK------P-L-LLGEEFHFKRLPIRSSQVYGIGRYDRPRRWT 228 (277)
T ss_pred CCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC------c-c-ccHHHHHhccCeEEeeccccccccccccccc
Confidence 4589999999875 5788999999999999999875431 0 0 11122344555666655433211 1
Q ss_pred HHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcC-CCcceEEE
Q 042784 304 FADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSS-SNIGKVVI 351 (356)
Q Consensus 304 ~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvi 351 (356)
..+.++++++++.++.+++.+.++|+++++++|++.+.++ ....|+++
T Consensus 229 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 229 EARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred ccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 2356888999999999988877889999999999999876 33456653
No 127
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.74 E-value=5.5e-17 Score=127.77 Aligned_cols=127 Identities=31% Similarity=0.478 Sum_probs=110.2
Q ss_pred hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCC-CceEEEECCc-hhhHHHHHHh
Q 042784 176 GVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPN-GIDVYLDNVG-GKMLEAVLNH 253 (356)
Q Consensus 176 ~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vld~~g-~~~~~~~~~~ 253 (356)
++|++++|+||..|++|++++++++++++++ ++|+++++++++ .++.+.+++++++ ++|+||||+| ...++.++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~-~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~ 78 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHVIDYSD-DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKL 78 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEEEETTT-SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhcccccccccc-cccccccccccccccceEEEEecCcHHHHHHHHHH
Confidence 6899999999999999999999999999999 999999999987 7799999999975 9999999999 6799999999
Q ss_pred cccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHHHHHHHHHHHH
Q 042784 254 VNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFADFTVEMESYIK 316 (356)
Q Consensus 254 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 316 (356)
++++|+++.+|.... .....+...++.+++++.++..++ ++.++++++++.
T Consensus 79 l~~~G~~v~vg~~~~-------~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la 129 (130)
T PF00107_consen 79 LRPGGRIVVVGVYGG-------DPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLA 129 (130)
T ss_dssp EEEEEEEEEESSTST-------SEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH
T ss_pred hccCCEEEEEEccCC-------CCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhc
Confidence 999999999999762 124457788899999999998776 244566666554
No 128
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.60 E-value=2.1e-15 Score=118.17 Aligned_cols=122 Identities=25% Similarity=0.301 Sum_probs=80.8
Q ss_pred hCCCceeecCChhhHHHHHHHHCCCCceEEEECCc--hhhH-HHHHHhcccCCEEEEEecccccccccccccchhhhhhh
Q 042784 209 FGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG--GKML-EAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNM 285 (356)
Q Consensus 209 ~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 285 (356)
||+++++||++ .++ ..++++|+||||+| .+.+ ..++++| ++|+++.++. .. .....
T Consensus 1 LGAd~vidy~~-~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-~~------------~~~~~ 59 (127)
T PF13602_consen 1 LGADEVIDYRD-TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-DL------------PSFAR 59 (127)
T ss_dssp CT-SEEEETTC-SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-HH------------HHHHH
T ss_pred CCcCEEecCCC-ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-cc------------cchhh
Confidence 69999999996 666 33468999999999 6544 6777888 9999998874 10 11111
Q ss_pred hccceEEEEEeccccc--chHHHHHHHHHHHHHcCCeeeeeeEEeChhhHHHHHHHHHcCCCcceEEE
Q 042784 286 IGKEVKMEGFMIGSHM--DRFADFTVEMESYIKEGKIRSKHVIYYGVESFLESLGSLFSSSNIGKVVI 351 (356)
Q Consensus 286 ~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 351 (356)
..+...+....+.... ....+.++++.+++.+|++++.+..+|||+++++|++.+++++..||+|+
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 60 RLKGRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HHHCHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred hhcccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 1111112222222111 22457799999999999999999999999999999999999999999996
No 129
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.57 E-value=8.6e-15 Score=111.36 Aligned_cols=78 Identities=18% Similarity=0.078 Sum_probs=61.8
Q ss_pred CCcEEEEEEEEEeChhhhhhhcCCCCCCccCCCccCceeeeeEEEEEeccCCCCCCCCCEEEec----------------
Q 042784 48 DHHVAVETLWISIDPYLRATMTGTNDGLYFPQFNLNQVILAFGIARVIRSKDSKYSDGDIVLRA---------------- 111 (356)
Q Consensus 48 ~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~~~~~~g~~~~~~G~v~~vg~~v~~~~~Gd~V~~~---------------- 111 (356)
|+||||||++++||++|++++.|........|+.+|+ |++|+|+++|+++++|++||||+..
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~Gh--E~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~ 78 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGH--EGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP 78 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-S--EEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCccccc--ceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence 6899999999999999999999742233344455555 9999999999999999999999951
Q ss_pred -------------cCCeeeEEeecCCccc
Q 042784 112 -------------FLPVAEYSLLPCDLLT 127 (356)
Q Consensus 112 -------------~g~~a~~~~v~~~~~~ 127 (356)
.|+|+||+++++++++
T Consensus 79 ~~c~~~~~~g~~~~G~~aey~~v~~~~~~ 107 (109)
T PF08240_consen 79 NLCPNPEVLGLGLDGGFAEYVVVPARNLV 107 (109)
T ss_dssp GGTTTBEETTTSSTCSSBSEEEEEGGGEE
T ss_pred ccCCCCCEeEcCCCCcccCeEEEehHHEE
Confidence 2889999999988773
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.34 E-value=3.1e-11 Score=111.47 Aligned_cols=178 Identities=13% Similarity=0.102 Sum_probs=130.3
Q ss_pred hhhHHHHHHHhCC-CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHH
Q 042784 149 GFAAWVGIEVLGQ-PKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAAL 227 (356)
Q Consensus 149 ~~ta~~~l~~~~~-~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 227 (356)
+...+.++.+..+ .-+|++|+|.|+ |.+|+.+++.++.+|++|++++.++.+.+.++ .+|+. +.+ ..+.+
T Consensus 185 g~s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~-~~~------~~e~v 255 (413)
T cd00401 185 RESLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYE-VMT------MEEAV 255 (413)
T ss_pred chhhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCE-Ecc------HHHHH
Confidence 3445566655433 368999999997 99999999999999999999999999999998 88884 221 12222
Q ss_pred HHHCCCCceEEEECCchh-hHHHH-HHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHH
Q 042784 228 TKYFPNGIDVYLDNVGGK-MLEAV-LNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFA 305 (356)
Q Consensus 228 ~~~~~~~~d~vld~~g~~-~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (356)
.++|+||+|+|.. .+... ++.++++|+++.+|... ...+...+..+++++.+.......
T Consensus 256 -----~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~~----------~eId~~~L~~~el~i~g~~~~~~~---- 316 (413)
T cd00401 256 -----KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHFD----------VEIDVKGLKENAVEVVNIKPQVDR---- 316 (413)
T ss_pred -----cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCCC----------CccCHHHHHhhccEEEEccCCcce----
Confidence 3589999999986 56655 89999999999998541 224555567778888776543211
Q ss_pred HHHH--HHHHHHHcCCe---eeeeeEE-----eChh-hHHHHHHHHHcCCCc-ceEEEEec
Q 042784 306 DFTV--EMESYIKEGKI---RSKHVIY-----YGVE-SFLESLGSLFSSSNI-GKVVIQVK 354 (356)
Q Consensus 306 ~~l~--~~~~~~~~g~i---~~~~~~~-----~~~~-~~~~a~~~~~~~~~~-gkvvi~~~ 354 (356)
..+. +.+.++.+|++ .+.+++. ++|+ |+.++++.+.++... .|+++.+.
T Consensus 317 ~~~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 317 YELPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred EEcCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 0123 57889999988 4455555 8899 999999999876543 47776653
No 131
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.28 E-value=1.2e-10 Score=110.36 Aligned_cols=148 Identities=12% Similarity=0.070 Sum_probs=104.8
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCce-eecCCh------------hhHHHHHH
Q 042784 162 PKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDA-FNYNSE------------MSFDAALT 228 (356)
Q Consensus 162 ~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v-~~~~~~------------~~~~~~i~ 228 (356)
..++++|+|.|+ |.+|+++++.|+.+|++|++++.++++++.++ ++|++.+ +|..+. .++.+..+
T Consensus 162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 357999999997 99999999999999999999999999999999 8999843 444221 13333333
Q ss_pred HH-CC--CCceEEEECCchh------h-HHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhc-cceEEEEEec
Q 042784 229 KY-FP--NGIDVYLDNVGGK------M-LEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIG-KEVKMEGFMI 297 (356)
Q Consensus 229 ~~-~~--~~~d~vld~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 297 (356)
+. .. +++|+||+|+|.+ . .++.++.++++|+++.+|...+.+- + ...+...++. +++++.++..
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~----e-~t~~~~~v~~~~gVti~Gv~n 314 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNC----E-LTVPGEVVVTDNGVTIIGYTD 314 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCc----c-cccCccceEeECCEEEEEeCC
Confidence 33 22 4799999999863 4 4899999999999999998543210 0 1112234454 7888888653
Q ss_pred ccccchHHHHHHHHHHHHHcCCee
Q 042784 298 GSHMDRFADFTVEMESYIKEGKIR 321 (356)
Q Consensus 298 ~~~~~~~~~~l~~~~~~~~~g~i~ 321 (356)
.. . ++-.+..+++.++.+.
T Consensus 315 ~P--~---~~p~~As~lla~~~i~ 333 (509)
T PRK09424 315 LP--S---RLPTQSSQLYGTNLVN 333 (509)
T ss_pred Cc--h---hHHHHHHHHHHhCCcc
Confidence 21 1 2333467777777654
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.55 E-value=6.5e-07 Score=79.59 Aligned_cols=172 Identities=16% Similarity=0.222 Sum_probs=102.1
Q ss_pred hCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHH---hCCCceeecCChhhHHHHHHHHCCC
Q 042784 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC--KVVGSTGSDDNVKLLKEE---FGYDDAFNYNSEMSFDAALTKYFPN 233 (356)
Q Consensus 159 ~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~--~V~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~~ 233 (356)
.+.+++|++||..|. |+ |..++++++..|. +|++++.+++..+.+++. +|...+ .... .++.+ + .+..+
T Consensus 72 ~~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~-~d~~~-l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRL-GEIEA-L-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEE-cchhh-C-CCCCC
Confidence 356889999999995 66 8888888888775 799999999998888732 333222 1111 22211 1 12235
Q ss_pred CceEEEECCc-----h--hhHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEecccccchHHH
Q 042784 234 GIDVYLDNVG-----G--KMLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFMIGSHMDRFAD 306 (356)
Q Consensus 234 ~~d~vld~~g-----~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (356)
.||+|+.... . ..+..+.+.|+|+|+++..+...... .... +.+...+.........
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~-------~~~~----~~~~~~~~~~~~~~~~----- 209 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGE-------LPEE----IRNDAELYAGCVAGAL----- 209 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCC-------CCHH----HHHhHHHHhccccCCC-----
Confidence 7999986532 1 37899999999999999876643311 0001 1111111111111111
Q ss_pred HHHHHHHHHHcCCee---eeeeEEeChhhHHHHHHHH--HcCCCcceEEEE
Q 042784 307 FTVEMESYIKEGKIR---SKHVIYYGVESFLESLGSL--FSSSNIGKVVIQ 352 (356)
Q Consensus 307 ~l~~~~~~~~~g~i~---~~~~~~~~~~~~~~a~~~~--~~~~~~gkvvi~ 352 (356)
..+++.+++.+..+. ......++++++.++++.+ .+++..++.+..
T Consensus 210 ~~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 260 (272)
T PRK11873 210 QEEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIVS 260 (272)
T ss_pred CHHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEEE
Confidence 123455566653333 3333468889999999988 565555555543
No 133
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.52 E-value=9.4e-06 Score=71.98 Aligned_cols=169 Identities=21% Similarity=0.273 Sum_probs=110.3
Q ss_pred eeEEEEEeccCCCCCCCCCEEEeccCCeeeEEeecCCccc----------------------ccCCCCC-CCCccccccc
Q 042784 88 AFGIARVIRSKDSKYSDGDIVLRAFLPVAEYSLLPCDLLT----------------------RKLDPAS-GIPFPDYLSS 144 (356)
Q Consensus 88 ~~G~v~~vg~~v~~~~~Gd~V~~~~g~~a~~~~v~~~~~~----------------------~~i~~P~-~~s~~~~aa~ 144 (356)
.-|..+++.|+++++.+|.||+ ++-+.++|+.+....+- +.-.+|. +-+.++ .-+
T Consensus 35 vWGfA~VveS~~~~i~vGerly-Gy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~~~e~-~~~ 112 (314)
T PF11017_consen 35 VWGFATVVESRHPGIAVGERLY-GYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDPERED-WQM 112 (314)
T ss_pred cceEEEEEeeCCCCccCccEEE-eeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCcchhH-HHH
Confidence 4488888999999999999999 88777777766654321 0000111 011222 223
Q ss_pred cCchh-hhHHHHHHHhC---CCCCCCEEEEEcCCChHHHHHHHHHH-HCCC-EEEEEeCChHHHHHHHHHhCC-Cceeec
Q 042784 145 LGIPG-FAAWVGIEVLG---QPKSGSNVFVSAAAGGVGMFAGQLAK-LKGC-KVVGSTGSDDNVKLLKEEFGY-DDAFNY 217 (356)
Q Consensus 145 l~~~~-~ta~~~l~~~~---~~~~g~~VlV~g~~g~vG~~~i~la~-~~G~-~V~~~~~s~~~~~~~~~~~g~-~~v~~~ 217 (356)
|.-++ .|.| ++.+.. +.-..+.|+|.+||+-+++.+...++ ..+. +++.++ |..+..+.+ .+|+ +.|+.|
T Consensus 113 LlrPLf~Tsf-ll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve-~lg~Yd~V~~Y 189 (314)
T PF11017_consen 113 LLRPLFITSF-LLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVE-SLGCYDEVLTY 189 (314)
T ss_pred HHHHHHHHHH-HHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhh-ccCCceEEeeh
Confidence 33333 3333 332221 12345789999999999999988888 5554 999998 888999998 9998 778888
Q ss_pred CChhhHHHHHHHHCCCCceEEEECCchh-hHHHHHHhcccC-CEEEEEecccc
Q 042784 218 NSEMSFDAALTKYFPNGIDVYLDNVGGK-MLEAVLNHVNVH-ARIILCGMISQ 268 (356)
Q Consensus 218 ~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~ 268 (356)
.+ |.++....--+++|..|+. ....+...++.. -..+.+|....
T Consensus 190 d~-------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~ 235 (314)
T PF11017_consen 190 DD-------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHW 235 (314)
T ss_pred hh-------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence 64 5555445567899999986 444555555544 35677776544
No 134
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.47 E-value=1.7e-06 Score=82.10 Aligned_cols=106 Identities=18% Similarity=0.220 Sum_probs=80.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCce-eecCC------------hhhHHHHHHH
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDA-FNYNS------------EMSFDAALTK 229 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v-~~~~~------------~~~~~~~i~~ 229 (356)
.++++|+|.|+ |.+|++++++++.+|++|++++.++++.+.++ ++|+..+ ++..+ ..++.+...+
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence 35789999997 99999999999999999999999999999998 7998642 22210 0233333333
Q ss_pred HC---CCCceEEEECC---chh----hHHHHHHhcccCCEEEEEecccccc
Q 042784 230 YF---PNGIDVYLDNV---GGK----MLEAVLNHVNVHARIILCGMISQYN 270 (356)
Q Consensus 230 ~~---~~~~d~vld~~---g~~----~~~~~~~~l~~~G~~v~~g~~~~~~ 270 (356)
+. .+++|++|+|+ |.+ ..++.++.+++++.++.++...+.+
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn 290 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGN 290 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCC
Confidence 22 24799999999 642 4567789999999999998766543
No 135
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.35 E-value=1.9e-05 Score=73.05 Aligned_cols=99 Identities=20% Similarity=0.243 Sum_probs=73.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECC--
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNV-- 242 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~-- 242 (356)
+.+|+|.|+ |.+|+.+++.++.+|++|+++++++++.+.+...++......+.+...+.+.+ ..+|++|+|+
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l-----~~aDvVI~a~~~ 240 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAV-----KRADLLIGAVLI 240 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHH-----ccCCEEEEcccc
Confidence 456999997 99999999999999999999999988888876566654222333323344433 3589999998
Q ss_pred -ch--h--hHHHHHHhcccCCEEEEEeccccc
Q 042784 243 -GG--K--MLEAVLNHVNVHARIILCGMISQY 269 (356)
Q Consensus 243 -g~--~--~~~~~~~~l~~~G~~v~~g~~~~~ 269 (356)
+. + .....++.+++++.++.++...+.
T Consensus 241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG 272 (370)
T TIGR00518 241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGG 272 (370)
T ss_pred CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCC
Confidence 33 2 236777889999999999876553
No 136
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.34 E-value=3.3e-06 Score=71.48 Aligned_cols=80 Identities=23% Similarity=0.395 Sum_probs=66.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC----CceeecCChhhHHHHHHHHCC--CCceE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGY----DDAFNYNSEMSFDAALTKYFP--NGIDV 237 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~----~~v~~~~~~~~~~~~i~~~~~--~~~d~ 237 (356)
.++.++|+||++|+|.++++.+...|++|+.+.|+.++++.+.++++. ...+|-.+..+..+.+..+.. +.+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 357899999999999999999999999999999999999999989993 344566664565555655442 46999
Q ss_pred EEECCc
Q 042784 238 YLDNVG 243 (356)
Q Consensus 238 vld~~g 243 (356)
++++.|
T Consensus 85 LvNNAG 90 (246)
T COG4221 85 LVNNAG 90 (246)
T ss_pred EEecCC
Confidence 999988
No 137
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.26 E-value=1.3e-05 Score=74.67 Aligned_cols=106 Identities=18% Similarity=0.193 Sum_probs=79.8
Q ss_pred hhhHHHHHHHhCCCC-CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHH
Q 042784 149 GFAAWVGIEVLGQPK-SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAAL 227 (356)
Q Consensus 149 ~~ta~~~l~~~~~~~-~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 227 (356)
...+|.++.+..++. .|++|+|.|. |.+|..+++.++.+|++|++++.++.+...+. ..|.. +. ++.+.+
T Consensus 195 ~~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~-v~------~l~eal 265 (425)
T PRK05476 195 GESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFR-VM------TMEEAA 265 (425)
T ss_pred HhhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCE-ec------CHHHHH
Confidence 344566665543444 8999999997 99999999999999999999998887776665 55654 22 122222
Q ss_pred HHHCCCCceEEEECCchh-hHH-HHHHhcccCCEEEEEecccc
Q 042784 228 TKYFPNGIDVYLDNVGGK-MLE-AVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 228 ~~~~~~~~d~vld~~g~~-~~~-~~~~~l~~~G~~v~~g~~~~ 268 (356)
.++|+|++|+|.. .+. ..+..+++++.++.+|....
T Consensus 266 -----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~ 303 (425)
T PRK05476 266 -----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN 303 (425)
T ss_pred -----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence 2589999999986 454 67889999999999987653
No 138
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.22 E-value=2.8e-05 Score=69.67 Aligned_cols=94 Identities=22% Similarity=0.315 Sum_probs=74.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
.+.+|+|.|. |.+|..+++.++.+|++|++.+++.++.+.++ ++|+. .+.+ .++.+.+ .++|+||+|++
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~-~~~~---~~l~~~l-----~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLS-PFHL---SELAEEV-----GKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCe-eecH---HHHHHHh-----CCCCEEEECCC
Confidence 5899999997 99999999999999999999999988888887 78865 2222 2333333 25999999998
Q ss_pred hhh-HHHHHHhcccCCEEEEEecccc
Q 042784 244 GKM-LEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 244 ~~~-~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
... ....++.+++++.++.++...+
T Consensus 220 ~~~i~~~~l~~~~~g~vIIDla~~pg 245 (296)
T PRK08306 220 ALVLTKEVLSKMPPEALIIDLASKPG 245 (296)
T ss_pred hhhhhHHHHHcCCCCcEEEEEccCCC
Confidence 653 3566778999999998887654
No 139
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.21 E-value=2.3e-05 Score=72.63 Aligned_cols=104 Identities=16% Similarity=0.157 Sum_probs=78.0
Q ss_pred hhHHHHHHHhCC-CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHH
Q 042784 150 FAAWVGIEVLGQ-PKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALT 228 (356)
Q Consensus 150 ~ta~~~l~~~~~-~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~ 228 (356)
..++.++.+..+ ...|++|+|.|. |.+|..+++.++.+|++|++++.++.+...++ ..|+. +.+ ..+.+
T Consensus 179 ~s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~~-v~~------leeal- 248 (406)
T TIGR00936 179 QSTIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGFR-VMT------MEEAA- 248 (406)
T ss_pred hhHHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCCE-eCC------HHHHH-
Confidence 345555554433 368999999997 99999999999999999999988887766666 55653 221 22223
Q ss_pred HHCCCCceEEEECCchh-hHH-HHHHhcccCCEEEEEeccc
Q 042784 229 KYFPNGIDVYLDNVGGK-MLE-AVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 229 ~~~~~~~d~vld~~g~~-~~~-~~~~~l~~~G~~v~~g~~~ 267 (356)
.+.|++|+++|.. .+. ..+..+++++.++.+|...
T Consensus 249 ----~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 249 ----KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred ----hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 2479999999986 454 4888999999999988754
No 140
>PLN02494 adenosylhomocysteinase
Probab=98.15 E-value=2.6e-05 Score=72.98 Aligned_cols=104 Identities=14% Similarity=0.185 Sum_probs=79.7
Q ss_pred hhHHHHHHHhCCC-CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHH
Q 042784 150 FAAWVGIEVLGQP-KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALT 228 (356)
Q Consensus 150 ~ta~~~l~~~~~~-~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~ 228 (356)
...+.++.+..++ -.|++|+|.|. |.+|..+++.++.+|++|++++.++.+...+. ..|.. +. ++.+.+.
T Consensus 238 qS~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~-vv------~leEal~ 308 (477)
T PLN02494 238 HSLPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQ-VL------TLEDVVS 308 (477)
T ss_pred ccHHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCe-ec------cHHHHHh
Confidence 3446666555443 67999999997 99999999999999999999998877766665 56664 22 1233332
Q ss_pred HHCCCCceEEEECCchhh--HHHHHHhcccCCEEEEEeccc
Q 042784 229 KYFPNGIDVYLDNVGGKM--LEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 229 ~~~~~~~d~vld~~g~~~--~~~~~~~l~~~G~~v~~g~~~ 267 (356)
.+|+++++.|... ....++.+++++.++.+|...
T Consensus 309 -----~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 309 -----EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred -----hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 3799999999863 478999999999999998853
No 141
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.10 E-value=2.3e-05 Score=68.19 Aligned_cols=82 Identities=16% Similarity=0.276 Sum_probs=62.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCc-----e--eecCChhhHHHHHHHHCC--C
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD-----A--FNYNSEMSFDAALTKYFP--N 233 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~-----v--~~~~~~~~~~~~i~~~~~--~ 233 (356)
..+.+++|+|||+|+|...+..+...|.+++.+.|++++++.+.+++.-.. + .|..+.++......++.. .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 457899999999999999999999999999999999999988876655322 2 355553444443333432 4
Q ss_pred CceEEEECCch
Q 042784 234 GIDVYLDNVGG 244 (356)
Q Consensus 234 ~~d~vld~~g~ 244 (356)
.+|+.++++|.
T Consensus 84 ~IdvLVNNAG~ 94 (265)
T COG0300 84 PIDVLVNNAGF 94 (265)
T ss_pred cccEEEECCCc
Confidence 79999999984
No 142
>PRK08324 short chain dehydrogenase; Validated
Probab=98.03 E-value=6.9e-05 Score=75.35 Aligned_cols=141 Identities=18% Similarity=0.206 Sum_probs=90.3
Q ss_pred CCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEE
Q 042784 113 LPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKV 192 (356)
Q Consensus 113 g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V 192 (356)
.++++|..+++..++. -+.+++++ + .+... ...+..+|+++||+|++|++|.++++.+...|++|
T Consensus 385 ~~~~~~~~l~~~~~f~----i~~~~~e~-a-~l~~~---------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~V 449 (681)
T PRK08324 385 EAVGRYEPLSEQEAFD----IEYWSLEQ-A-KLQRM---------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACV 449 (681)
T ss_pred hhcCCccCCChhhhcc----eeeehhhh-h-hhhcC---------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEE
Confidence 4567787777665522 13466666 2 21100 01223468999999999999999999999999999
Q ss_pred EEEeCChHHHHHHHHHhCC-----CceeecCChhhHHHHHHHHC--CCCceEEEECCch---------------------
Q 042784 193 VGSTGSDDNVKLLKEEFGY-----DDAFNYNSEMSFDAALTKYF--PNGIDVYLDNVGG--------------------- 244 (356)
Q Consensus 193 ~~~~~s~~~~~~~~~~~g~-----~~v~~~~~~~~~~~~i~~~~--~~~~d~vld~~g~--------------------- 244 (356)
++++++.++.+.+.+.++. ....|..+...+.+.+.+.. .+++|++|++.|.
T Consensus 450 vl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N 529 (681)
T PRK08324 450 VLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVN 529 (681)
T ss_pred EEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHH
Confidence 9999998887766645554 11234444344444344332 2479999999982
Q ss_pred -----hhHHHHHHhccc---CCEEEEEecccc
Q 042784 245 -----KMLEAVLNHVNV---HARIILCGMISQ 268 (356)
Q Consensus 245 -----~~~~~~~~~l~~---~G~~v~~g~~~~ 268 (356)
..++.+++.++. +|+++.++....
T Consensus 530 ~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~ 561 (681)
T PRK08324 530 ATGHFLVAREAVRIMKAQGLGGSIVFIASKNA 561 (681)
T ss_pred hHHHHHHHHHHHHHHHhcCCCcEEEEECCccc
Confidence 023344555555 588998887543
No 143
>PRK12742 oxidoreductase; Provisional
Probab=97.99 E-value=0.00012 Score=63.38 Aligned_cols=103 Identities=19% Similarity=0.220 Sum_probs=67.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHhCCCce-eecCChhhHHHHHHHHCCCCceEEEEC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTG-SDDNVKLLKEEFGYDDA-FNYNSEMSFDAALTKYFPNGIDVYLDN 241 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~-s~~~~~~~~~~~g~~~v-~~~~~~~~~~~~i~~~~~~~~d~vld~ 241 (356)
.++++||+|++|++|.++++.+...|++|+.+.+ ++++.+.+.++++...+ .|..+...+.+.+.+. +++|++|++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence 3789999999999999999999999999887754 45555555435665422 3444423344444332 469999999
Q ss_pred Cchh-----------h---------------HHHHHHhcccCCEEEEEecccc
Q 042784 242 VGGK-----------M---------------LEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 242 ~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
.|.. . ...+...++..|+++.++....
T Consensus 83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 135 (237)
T PRK12742 83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG 135 (237)
T ss_pred CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 8741 0 1233344566789998876543
No 144
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.98 E-value=0.0001 Score=63.94 Aligned_cols=105 Identities=22% Similarity=0.289 Sum_probs=71.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC---CCcee--ecCChhhHHHHHHHHC--CCCce
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFG---YDDAF--NYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g---~~~v~--~~~~~~~~~~~i~~~~--~~~~d 236 (356)
.+++|+|+|++|++|..+++.+...|++|+.+++++++.+.+.+.+. ..+.+ |..+...+.+.+.+.. -+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 36899999999999999999999999999999999887766632332 21222 3333333443333322 14689
Q ss_pred EEEECCchh------------------------hHHHHHHhcccCCEEEEEecccc
Q 042784 237 VYLDNVGGK------------------------MLEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 237 ~vld~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
.++.+.|.. .++..+.+++.+|+++.++....
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~ 139 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSG 139 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence 999988731 13445556677889998876543
No 145
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.96 E-value=9.9e-05 Score=66.80 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=73.3
Q ss_pred CCCCCccccccccCchhhhHHHHHHHhCCC---CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHH
Q 042784 133 ASGIPFPDYLSSLGIPGFAAWVGIEVLGQP---KSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEE 208 (356)
Q Consensus 133 P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~---~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~ 208 (356)
|+.++.+. +....+...++.++...... .++.+|+|.|+ |.+|..+++.++..|+ +|+++++++++...+.++
T Consensus 145 ~k~vr~et--~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~ 221 (311)
T cd05213 145 GKRVRTET--GISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKE 221 (311)
T ss_pred HHHHhhhc--CCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence 77787776 44445666777776532221 46899999997 9999999999998886 899999988876555448
Q ss_pred hCCCceeecCChhhHHHHHHHHCCCCceEEEECCchhhH
Q 042784 209 FGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKML 247 (356)
Q Consensus 209 ~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~ 247 (356)
+|+. ++++ .++.+.+. .+|+||.|++.+..
T Consensus 222 ~g~~-~~~~---~~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 222 LGGN-AVPL---DELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred cCCe-EEeH---HHHHHHHh-----cCCEEEECCCCCch
Confidence 8873 4433 23444333 38999999998643
No 146
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.94 E-value=0.00021 Score=63.52 Aligned_cols=77 Identities=19% Similarity=0.378 Sum_probs=57.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCce-eecCChhhHHHHHHHHC--CCCceEEEECC
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDA-FNYNSEMSFDAALTKYF--PNGIDVYLDNV 242 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v-~~~~~~~~~~~~i~~~~--~~~~d~vld~~ 242 (356)
+++||+||+|++|...++.+...|++|++++++.++.+.+. ..+...+ .|..+..++.+.+.++. .+++|+++++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 47999999999999999999889999999999888777766 4454322 46655444444444432 24699999998
Q ss_pred c
Q 042784 243 G 243 (356)
Q Consensus 243 g 243 (356)
|
T Consensus 81 g 81 (274)
T PRK05693 81 G 81 (274)
T ss_pred C
Confidence 8
No 147
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.93 E-value=6e-05 Score=59.34 Aligned_cols=95 Identities=21% Similarity=0.290 Sum_probs=64.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC--ceeecCChhhHHHHHHHHCCCCceEEEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYD--DAFNYNSEMSFDAALTKYFPNGIDVYLD 240 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~i~~~~~~~~d~vld 240 (356)
.+.+++|.|+ |++|.+++..+...|+ +|+++.|+.++.+.+.+.++.. ..+.+. ++.+.+. .+|+||.
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~---~~~~~~~-----~~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE---DLEEALQ-----EADIVIN 81 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG---GHCHHHH-----TESEEEE
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH---HHHHHHh-----hCCeEEE
Confidence 4899999997 9999999999999999 6999999999988887787443 234443 3443443 4899999
Q ss_pred CCchhh---HHHHHHhccc-CCEEEEEeccc
Q 042784 241 NVGGKM---LEAVLNHVNV-HARIILCGMIS 267 (356)
Q Consensus 241 ~~g~~~---~~~~~~~l~~-~G~~v~~g~~~ 267 (356)
|++... -...+..... .+.++.++.+.
T Consensus 82 aT~~~~~~i~~~~~~~~~~~~~~v~Dla~Pr 112 (135)
T PF01488_consen 82 ATPSGMPIITEEMLKKASKKLRLVIDLAVPR 112 (135)
T ss_dssp -SSTTSTSSTHHHHTTTCHHCSEEEES-SS-
T ss_pred ecCCCCcccCHHHHHHHHhhhhceeccccCC
Confidence 998752 1222222222 25677776543
No 148
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.91 E-value=6.8e-05 Score=61.60 Aligned_cols=79 Identities=18% Similarity=0.325 Sum_probs=59.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC--CceeecCCh---hhHHHHHHHHCCCCceEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGY--DDAFNYNSE---MSFDAALTKYFPNGIDVY 238 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~--~~v~~~~~~---~~~~~~i~~~~~~~~d~v 238 (356)
.|.+|||+||++|+|++..+-...+|-+|++..+++++++.++++... ..+.|..+. ..+.+.+.+-.+ ..+++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNvl 82 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNVL 82 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhee
Confidence 478999999999999999998899999999999999999999865443 233444332 234444444332 48999
Q ss_pred EECCc
Q 042784 239 LDNVG 243 (356)
Q Consensus 239 ld~~g 243 (356)
++|.|
T Consensus 83 iNNAG 87 (245)
T COG3967 83 INNAG 87 (245)
T ss_pred eeccc
Confidence 99888
No 149
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.85 E-value=0.00067 Score=56.23 Aligned_cols=92 Identities=18% Similarity=0.198 Sum_probs=64.2
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCc-eeecCChhhHHHHHHHHCCCCceEEEECCch--
Q 042784 168 VFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD-AFNYNSEMSFDAALTKYFPNGIDVYLDNVGG-- 244 (356)
Q Consensus 168 VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~-- 244 (356)
|+|+||+|.+|...++.+...|.+|+++++++++.+. ..+... ..|..+...+.+.+ .++|+||+++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al-----~~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAAL-----KGADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHH-----TTSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhh-----hhcchhhhhhhhhc
Confidence 7999999999999999999999999999999987775 223321 12333323333333 369999999983
Q ss_pred ---hhHHHHHHhcccCC--EEEEEeccc
Q 042784 245 ---KMLEAVLNHVNVHA--RIILCGMIS 267 (356)
Q Consensus 245 ---~~~~~~~~~l~~~G--~~v~~g~~~ 267 (356)
.......+.++..| +++.++...
T Consensus 73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccccceeeeccc
Confidence 34555566554444 777776544
No 150
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.85 E-value=0.00025 Score=62.15 Aligned_cols=143 Identities=18% Similarity=0.222 Sum_probs=88.9
Q ss_pred CCCCCCCCEEEeccCCeeeEEeecCCcccccCCCCCCCCccccccccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHH
Q 042784 99 DSKYSDGDIVLRAFLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVG 178 (356)
Q Consensus 99 v~~~~~Gd~V~~~~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG 178 (356)
.+.+++||+++ -.-+|.+|.. +...++. + ++++++.. +..+.+.. ....+.. .+.++++||-.|. |. |
T Consensus 64 ~~p~~~g~~~~-i~p~~~~~~~-~~~~~i~-i--~p~~afgt--g~h~tt~~-~l~~l~~--~~~~~~~VLDiGc-Gs-G 131 (250)
T PRK00517 64 FHPIRIGDRLW-IVPSWEDPPD-PDEINIE-L--DPGMAFGT--GTHPTTRL-CLEALEK--LVLPGKTVLDVGC-GS-G 131 (250)
T ss_pred CCCEEEcCCEE-EECCCcCCCC-CCeEEEE-E--CCCCccCC--CCCHHHHH-HHHHHHh--hcCCCCEEEEeCC-cH-H
Confidence 34477899887 4456666643 4444433 3 66677654 22222211 2222321 2568999999995 65 8
Q ss_pred HHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCce---eecCChhhHHHHHHHHCCC-CceEEEECCchh----hHHH
Q 042784 179 MFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDA---FNYNSEMSFDAALTKYFPN-GIDVYLDNVGGK----MLEA 249 (356)
Q Consensus 179 ~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v---~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~----~~~~ 249 (356)
..++.+++ .|+ +|++++.++...+.+++.+....+ +... .+. .||+|+.+.... .+..
T Consensus 132 ~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~------------~~~~~fD~Vvani~~~~~~~l~~~ 198 (250)
T PRK00517 132 ILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLP------------QGDLKADVIVANILANPLLELAPD 198 (250)
T ss_pred HHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEc------------cCCCCcCEEEEcCcHHHHHHHHHH
Confidence 88776555 577 699999999988887743221111 1110 011 599999876653 5678
Q ss_pred HHHhcccCCEEEEEecc
Q 042784 250 VLNHVNVHARIILCGMI 266 (356)
Q Consensus 250 ~~~~l~~~G~~v~~g~~ 266 (356)
+.+.|+++|.++..|..
T Consensus 199 ~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 199 LARLLKPGGRLILSGIL 215 (250)
T ss_pred HHHhcCCCcEEEEEECc
Confidence 88999999999987654
No 151
>PRK06182 short chain dehydrogenase; Validated
Probab=97.84 E-value=0.0003 Score=62.48 Aligned_cols=80 Identities=24% Similarity=0.356 Sum_probs=59.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-ceeecCChhhHHHHHHHHC--CCCceEEEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-DAFNYNSEMSFDAALTKYF--PNGIDVYLD 240 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~--~~~~d~vld 240 (356)
.+.+++|+|++|++|..+++.+...|++|+++++++++.+.+. ..+.. ...|..+..++.+.+.++. .+++|+++.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3679999999999999999988889999999999888876665 44443 2245555445555454432 347999999
Q ss_pred CCch
Q 042784 241 NVGG 244 (356)
Q Consensus 241 ~~g~ 244 (356)
+.|.
T Consensus 81 ~ag~ 84 (273)
T PRK06182 81 NAGY 84 (273)
T ss_pred CCCc
Confidence 9873
No 152
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.83 E-value=2.6e-05 Score=76.66 Aligned_cols=98 Identities=14% Similarity=0.173 Sum_probs=64.4
Q ss_pred CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC---------------------hHHHHHHHHHhCCCceeecCC
Q 042784 161 QPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGS---------------------DDNVKLLKEEFGYDDAFNYNS 219 (356)
Q Consensus 161 ~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s---------------------~~~~~~~~~~~g~~~v~~~~~ 219 (356)
..++|++|+|.|+ |+.|+++++.++..|++|++++.. +.+.+.++ ++|++..++...
T Consensus 133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~-~~Gv~~~~~~~~ 210 (564)
T PRK12771 133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRIL-DLGVEVRLGVRV 210 (564)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHH-HCCCEEEeCCEE
Confidence 3678999999997 999999999999999999988742 34566777 789865554321
Q ss_pred hhhH-HHHHHHHCCCCceEEEECCchh-hHHHHHHhcccCCEEEEEe
Q 042784 220 EMSF-DAALTKYFPNGIDVYLDNVGGK-MLEAVLNHVNVHARIILCG 264 (356)
Q Consensus 220 ~~~~-~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g 264 (356)
..+. .+.+ ..++|+||+++|.. .....+......|.+..++
T Consensus 211 ~~~~~~~~~----~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~ 253 (564)
T PRK12771 211 GEDITLEQL----EGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVD 253 (564)
T ss_pred CCcCCHHHH----HhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHH
Confidence 0111 1112 13599999999974 2222333344455544433
No 153
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.79 E-value=0.00046 Score=60.86 Aligned_cols=80 Identities=15% Similarity=0.189 Sum_probs=57.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-c--eeecCChhhHHHHHHHHC--CCCceEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-D--AFNYNSEMSFDAALTKYF--PNGIDVY 238 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d~v 238 (356)
.+.+++|+|++|++|..+++.+...|++|++++++.++.+.+.++++.. . ..|..+..++.+.+.+.. -+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4689999999999999999998889999999999887766665465532 1 234444344444443322 2469999
Q ss_pred EECCc
Q 042784 239 LDNVG 243 (356)
Q Consensus 239 ld~~g 243 (356)
+.+.|
T Consensus 85 v~~ag 89 (261)
T PRK08265 85 VNLAC 89 (261)
T ss_pred EECCC
Confidence 99887
No 154
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.77 E-value=0.00026 Score=63.05 Aligned_cols=79 Identities=15% Similarity=0.373 Sum_probs=58.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCc-eeecCChhhHHHHHHH---HCCCCceEEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD-AFNYNSEMSFDAALTK---YFPNGIDVYL 239 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~---~~~~~~d~vl 239 (356)
.+.+++|+||+|++|.++++.+...|++|+++++++++.+.+. ..+... ..|..+..++...+.+ ..++.+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4678999999999999999988889999999999988887776 445432 2355553444333333 3345799999
Q ss_pred ECCc
Q 042784 240 DNVG 243 (356)
Q Consensus 240 d~~g 243 (356)
.+.|
T Consensus 82 ~~Ag 85 (277)
T PRK05993 82 NNGA 85 (277)
T ss_pred ECCC
Confidence 9876
No 155
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.76 E-value=0.00035 Score=67.37 Aligned_cols=104 Identities=17% Similarity=0.204 Sum_probs=68.3
Q ss_pred hCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--------CCC-----c--eeecCChhhH
Q 042784 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF--------GYD-----D--AFNYNSEMSF 223 (356)
Q Consensus 159 ~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~--------g~~-----~--v~~~~~~~~~ 223 (356)
..+.+.|.+|||+||+|++|..+++.+...|++|++++++.++.+.+.+.+ |.. . ..|..+..++
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI 153 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQI 153 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHH
Confidence 455678999999999999999999999889999999999888776543221 211 1 1244432233
Q ss_pred HHHHHHHCCCCceEEEECCchh----------------hHHHHHHhccc--CCEEEEEeccc
Q 042784 224 DAALTKYFPNGIDVYLDNVGGK----------------MLEAVLNHVNV--HARIILCGMIS 267 (356)
Q Consensus 224 ~~~i~~~~~~~~d~vld~~g~~----------------~~~~~~~~l~~--~G~~v~~g~~~ 267 (356)
.+. + +++|+||.|+|.. ....+++.+.. .++||.++...
T Consensus 154 ~~a---L--ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 154 GPA---L--GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred HHH---h--cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 222 2 4699999998742 11223333332 36899887654
No 156
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.76 E-value=0.00027 Score=63.63 Aligned_cols=81 Identities=26% Similarity=0.315 Sum_probs=59.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-ce----eecCChhhHHHHHHHHC--CCCce
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-DA----FNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~v----~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
.|+++||+|++|++|.++++.+...|++|+++++++++.+.+.++++.. .+ .|..+..++.+.+.++. -+.+|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999999999999999999999999999999988877766566531 11 35554344444443332 24699
Q ss_pred EEEECCch
Q 042784 237 VYLDNVGG 244 (356)
Q Consensus 237 ~vld~~g~ 244 (356)
++|++.|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999883
No 157
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.68 E-value=0.00092 Score=59.66 Aligned_cols=94 Identities=24% Similarity=0.336 Sum_probs=70.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
.|++++|.|. |.+|.+++..++.+|++|++..+++++.+.+. ++|.. .+.+ .++.+.+ ..+|+|+.++.
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~-~~~~---~~l~~~l-----~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLI-PFPL---NKLEEKV-----AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-eecH---HHHHHHh-----ccCCEEEECCC
Confidence 4789999997 99999999999999999999999988877776 66653 2222 2333333 35899999997
Q ss_pred hhhH-HHHHHhcccCCEEEEEecccc
Q 042784 244 GKML-EAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 244 ~~~~-~~~~~~l~~~G~~v~~g~~~~ 268 (356)
...+ ...++.++++..++.++...+
T Consensus 219 ~~ii~~~~l~~~k~~aliIDlas~Pg 244 (287)
T TIGR02853 219 ALVLTADVLSKLPKHAVIIDLASKPG 244 (287)
T ss_pred hHHhCHHHHhcCCCCeEEEEeCcCCC
Confidence 6533 346677888888888877554
No 158
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.68 E-value=0.00042 Score=65.22 Aligned_cols=92 Identities=18% Similarity=0.229 Sum_probs=71.3
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEEC
Q 042784 162 PKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDN 241 (356)
Q Consensus 162 ~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~ 241 (356)
.-.|++|+|.|. |.+|..+++.++.+|++|++++.++.+...+. ..|+. +. ++.+.+ ..+|+|+.+
T Consensus 251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~-~~------~leell-----~~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQ-VV------TLEDVV-----ETADIFVTA 316 (476)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCce-ec------cHHHHH-----hcCCEEEEC
Confidence 457999999997 99999999999999999999987766665555 44653 22 233333 248999999
Q ss_pred Cchh-hH-HHHHHhcccCCEEEEEeccc
Q 042784 242 VGGK-ML-EAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 242 ~g~~-~~-~~~~~~l~~~G~~v~~g~~~ 267 (356)
+|.. .+ ...+..|++++.++.+|...
T Consensus 317 tGt~~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 317 TGNKDIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred CCcccccCHHHHhccCCCcEEEEcCCCc
Confidence 9875 44 47899999999999998763
No 159
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00073 Score=59.49 Aligned_cols=83 Identities=18% Similarity=0.243 Sum_probs=57.7
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC----ceeecCChhhHHHHHHHHC--CCCc
Q 042784 162 PKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD----DAFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 162 ~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~----~v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.-++.++||+|++|++|..+++.+...|++|++++++++..+.+.+.+... ...|..+..++.+.+.+.. -+++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 356799999999999999999999999999999998877766665333322 2234444333333333321 1369
Q ss_pred eEEEECCch
Q 042784 236 DVYLDNVGG 244 (356)
Q Consensus 236 d~vld~~g~ 244 (356)
|+||.+.|.
T Consensus 88 d~vi~~ag~ 96 (264)
T PRK12829 88 DVLVNNAGI 96 (264)
T ss_pred CEEEECCCC
Confidence 999998874
No 160
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.67 E-value=0.00028 Score=53.39 Aligned_cols=94 Identities=20% Similarity=0.285 Sum_probs=65.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHh---CCCceeecCChhhHHHHHHHHCCCCceEEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAK-LKGCKVVGSTGSDDNVKLLKEEF---GYDDAFNYNSEMSFDAALTKYFPNGIDVYL 239 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~-~~G~~V~~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~i~~~~~~~~d~vl 239 (356)
|+.+||-.| .|.|..++.+++ ..+++|++++.+++..+.+++.+ +...-+.... .++ .... -....+|+|+
T Consensus 1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~-~d~-~~~~-~~~~~~D~v~ 75 (112)
T PF12847_consen 1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQ-GDA-EFDP-DFLEPFDLVI 75 (112)
T ss_dssp TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE-SCC-HGGT-TTSSCEEEEE
T ss_pred CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE-Ccc-ccCc-ccCCCCCEEE
Confidence 688999998 456888889998 47889999999999998888655 3322222221 233 1111 1134699999
Q ss_pred ECC-ch----h------hHHHHHHhcccCCEEEE
Q 042784 240 DNV-GG----K------MLEAVLNHVNVHARIIL 262 (356)
Q Consensus 240 d~~-g~----~------~~~~~~~~l~~~G~~v~ 262 (356)
... .. . .++.+.+.|+|+|+++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi 109 (112)
T PF12847_consen 76 CSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI 109 (112)
T ss_dssp ECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 877 22 1 37888899999999875
No 161
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.001 Score=60.97 Aligned_cols=81 Identities=20% Similarity=0.233 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---HhCCCc---eeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKE---EFGYDD---AFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+ +.|... ..|..+..++.+.+.++. -+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 46799999999999999999998899999999998877665443 234431 235555344444333321 1469
Q ss_pred eEEEECCch
Q 042784 236 DVYLDNVGG 244 (356)
Q Consensus 236 d~vld~~g~ 244 (356)
|++|++.|.
T Consensus 87 D~lInnAg~ 95 (334)
T PRK07109 87 DTWVNNAMV 95 (334)
T ss_pred CEEEECCCc
Confidence 999999873
No 162
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.63 E-value=0.0019 Score=54.39 Aligned_cols=99 Identities=16% Similarity=0.235 Sum_probs=69.5
Q ss_pred hCCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHH---HhC-CCceeecCChhhHHHHHHHHCC
Q 042784 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLKG--CKVVGSTGSDDNVKLLKE---EFG-YDDAFNYNSEMSFDAALTKYFP 232 (356)
Q Consensus 159 ~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G--~~V~~~~~s~~~~~~~~~---~~g-~~~v~~~~~~~~~~~~i~~~~~ 232 (356)
...+.++++|+-.|+ |. |.+++++++..+ .+|++++.+++..+.+++ .+| .+.+.... .+..+.+.+. .
T Consensus 35 ~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~--~d~~~~l~~~-~ 109 (198)
T PRK00377 35 KLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK--GEAPEILFTI-N 109 (198)
T ss_pred HcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE--echhhhHhhc-C
Confidence 467889999999996 66 999999998764 499999999988877653 356 23222221 2232223222 2
Q ss_pred CCceEEEECCch----hhHHHHHHhcccCCEEEE
Q 042784 233 NGIDVYLDNVGG----KMLEAVLNHVNVHARIIL 262 (356)
Q Consensus 233 ~~~d~vld~~g~----~~~~~~~~~l~~~G~~v~ 262 (356)
+.+|.|+...+. ..+..+.+.|+++|+++.
T Consensus 110 ~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 110 EKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred CCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 469999986553 367888899999999885
No 163
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.00062 Score=62.26 Aligned_cols=80 Identities=21% Similarity=0.375 Sum_probs=57.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---HhCCCc---eeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKE---EFGYDD---AFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.++++||+|++|++|.++++.+...|++|+.+++++++.+.+.+ +.|... ..|..+..++.+.+.+.. .+++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 46899999999999999999999999999999999888765543 345432 235554333333333221 2569
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|++|++.|
T Consensus 86 D~lVnnAG 93 (330)
T PRK06139 86 DVWVNNVG 93 (330)
T ss_pred CEEEECCC
Confidence 99999988
No 164
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.61 E-value=0.00082 Score=59.06 Aligned_cols=105 Identities=19% Similarity=0.284 Sum_probs=70.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---HhCCCc-ee----ecCChhhHHHHHHHHC--CC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKE---EFGYDD-AF----NYNSEMSFDAALTKYF--PN 233 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~---~~g~~~-v~----~~~~~~~~~~~i~~~~--~~ 233 (356)
.|+.|+|+|||+|+|.+++.-.-..|++++.+.+..++++.+.+ +.+..+ ++ |-.+.++....+.++- -+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 47899999999999999888888899988888878777666521 344443 32 3333344444433221 36
Q ss_pred CceEEEECCchh--------------------------hHHHHHHhcccC--CEEEEEecccc
Q 042784 234 GIDVYLDNVGGK--------------------------MLEAVLNHVNVH--ARIILCGMISQ 268 (356)
Q Consensus 234 ~~d~vld~~g~~--------------------------~~~~~~~~l~~~--G~~v~~g~~~~ 268 (356)
++|+.+++.|-. .-..++..|+.. |+++.+++..+
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG 153 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG 153 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence 799999988831 113455555443 99999988766
No 165
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.60 E-value=0.00056 Score=60.34 Aligned_cols=80 Identities=18% Similarity=0.255 Sum_probs=58.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-c--eeecCChhhHHHHHHHHC--CCCceEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-D--AFNYNSEMSFDAALTKYF--PNGIDVY 238 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d~v 238 (356)
.+.+++|+|++|++|..+++.+...|++|+.+++++++.+.+.++++.. . ..|..+..++.+.+.+.. -+.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4789999999999999999988889999999999888877776555432 1 124444334444444332 2469999
Q ss_pred EECCc
Q 042784 239 LDNVG 243 (356)
Q Consensus 239 ld~~g 243 (356)
+.+.|
T Consensus 85 i~~ag 89 (263)
T PRK06200 85 VGNAG 89 (263)
T ss_pred EECCC
Confidence 99887
No 166
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.58 E-value=0.00036 Score=65.99 Aligned_cols=138 Identities=20% Similarity=0.125 Sum_probs=86.8
Q ss_pred eeeeeEEEEEeccCCCCCCCCCEEEecc-----------C--------CeeeEEeecCCcccccCCCCCCCCcccccccc
Q 042784 85 VILAFGIARVIRSKDSKYSDGDIVLRAF-----------L--------PVAEYSLLPCDLLTRKLDPASGIPFPDYLSSL 145 (356)
Q Consensus 85 ~~~~~G~v~~vg~~v~~~~~Gd~V~~~~-----------g--------~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l 145 (356)
|.+..+.+-+|+++.+..-+|+.-+++. | .|++.+.+ |+.+..+. +..
T Consensus 93 g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a~~~-----------~k~v~~~t--~i~ 159 (423)
T PRK00045 93 GEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKAFSV-----------AKRVRTET--GIG 159 (423)
T ss_pred CHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH-----------HhhHhhhc--CCC
Confidence 3467777777888777655565443221 2 22332222 33333332 233
Q ss_pred CchhhhHHHHHHHhCC---CCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeecCChh
Q 042784 146 GIPGFAAWVGIEVLGQ---PKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEM 221 (356)
Q Consensus 146 ~~~~~ta~~~l~~~~~---~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 221 (356)
..+...++.++..... -.++.+|+|.|+ |.+|.++++.++..|+ +|+++.++.++...+.+.+|.. ++++ .
T Consensus 160 ~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~---~ 234 (423)
T PRK00045 160 AGAVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL---D 234 (423)
T ss_pred CCCcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH---H
Confidence 3345556666643221 256899999997 9999999999999998 8999999988876554478764 4433 2
Q ss_pred hHHHHHHHHCCCCceEEEECCchh
Q 042784 222 SFDAALTKYFPNGIDVYLDNVGGK 245 (356)
Q Consensus 222 ~~~~~i~~~~~~~~d~vld~~g~~ 245 (356)
++.+.+ .++|+||+|+|.+
T Consensus 235 ~~~~~l-----~~aDvVI~aT~s~ 253 (423)
T PRK00045 235 ELPEAL-----AEADIVISSTGAP 253 (423)
T ss_pred HHHHHh-----ccCCEEEECCCCC
Confidence 333333 3589999999874
No 167
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.58 E-value=0.00069 Score=59.45 Aligned_cols=81 Identities=17% Similarity=0.229 Sum_probs=58.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-ceeecCChhhHHHHHHHHC--CCCceEEEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-DAFNYNSEMSFDAALTKYF--PNGIDVYLD 240 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~--~~~~d~vld 240 (356)
.|++|+|+||+|++|.++++.+...|++|+++++++.+.+...++++.. ...|..+..++...+.+.. .+++|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4789999999999999999999899999999998887766655455542 2235555344444343322 246899999
Q ss_pred CCch
Q 042784 241 NVGG 244 (356)
Q Consensus 241 ~~g~ 244 (356)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 8863
No 168
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.00083 Score=58.42 Aligned_cols=79 Identities=23% Similarity=0.377 Sum_probs=57.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCc-eeecCChhhHHHHHHHHCCCCceEEEECC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD-AFNYNSEMSFDAALTKYFPNGIDVYLDNV 242 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vld~~ 242 (356)
.+.+++|+|++|++|..+++.+...|++|++++++.++.+.+.+.++... ..|..+..++.+.+.+ .+++|++|++.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~~~~d~vi~~a 85 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--AGAFDGLVNCA 85 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH--hCCCCEEEECC
Confidence 46899999999999999999999999999999988887766654555432 2344442333333322 24699999988
Q ss_pred ch
Q 042784 243 GG 244 (356)
Q Consensus 243 g~ 244 (356)
|.
T Consensus 86 g~ 87 (245)
T PRK07060 86 GI 87 (245)
T ss_pred CC
Confidence 73
No 169
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.57 E-value=0.0016 Score=62.36 Aligned_cols=80 Identities=19% Similarity=0.277 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCh--HHHHHHHHHhCCC-ceeecCChhhHHHHHHHHC--CCCceEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSD--DNVKLLKEEFGYD-DAFNYNSEMSFDAALTKYF--PNGIDVY 238 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~--~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~--~~~~d~v 238 (356)
++.++||+|++|++|..+++.+...|++|++++++. ++.+.+.++++.. ...|..+.......+.++. .+++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 578999999999999999999999999999988642 3333343355543 2245555333333333332 2369999
Q ss_pred EECCc
Q 042784 239 LDNVG 243 (356)
Q Consensus 239 ld~~g 243 (356)
|++.|
T Consensus 289 i~~AG 293 (450)
T PRK08261 289 VHNAG 293 (450)
T ss_pred EECCC
Confidence 99988
No 170
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.0013 Score=56.80 Aligned_cols=81 Identities=17% Similarity=0.266 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC---Cce--eecCChhhHHHHHHHHC--CCCce
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGY---DDA--FNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~---~~v--~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
.+.+++|+||+|++|..+++.+...|++|+++++++++...+.+++.. .+. .|..+..++.+.+.++. .+++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999888878899999999888776665545432 112 24444344444444332 24699
Q ss_pred EEEECCch
Q 042784 237 VYLDNVGG 244 (356)
Q Consensus 237 ~vld~~g~ 244 (356)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99998763
No 171
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.00067 Score=60.20 Aligned_cols=79 Identities=24% Similarity=0.296 Sum_probs=57.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCce--eecCChhhHHHHHHHHC--CCCceEEEE
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDA--FNYNSEMSFDAALTKYF--PNGIDVYLD 240 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~--~~~~d~vld 240 (356)
+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+.++...+ .|..+..++.+.+.++. -+++|+++.
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN 84 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 67999999999999999988888899999999988887766545552212 35555444444444332 146999999
Q ss_pred CCc
Q 042784 241 NVG 243 (356)
Q Consensus 241 ~~g 243 (356)
+.|
T Consensus 85 ~ag 87 (273)
T PRK07825 85 NAG 87 (273)
T ss_pred CCC
Confidence 987
No 172
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.0089 Score=52.47 Aligned_cols=81 Identities=11% Similarity=0.128 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHH---HhCCC---ceeecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCK-VVGSTGSDDNVKLLKE---EFGYD---DAFNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~-V~~~~~s~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~i~~~~--~~~ 234 (356)
.+.+++|+|++|++|..+++.+...|++ |++++++.++.+...+ ..+.. ...|..+..++.+.+.+.. -++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999997 9999987765543322 23432 1235554333444333321 136
Q ss_pred ceEEEECCch
Q 042784 235 IDVYLDNVGG 244 (356)
Q Consensus 235 ~d~vld~~g~ 244 (356)
+|.+|.+.|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999873
No 173
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.0014 Score=57.70 Aligned_cols=79 Identities=25% Similarity=0.431 Sum_probs=56.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC----ceeecCChhhHHHHHHHH---CCCCceEE
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD----DAFNYNSEMSFDAALTKY---FPNGIDVY 238 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~----~v~~~~~~~~~~~~i~~~---~~~~~d~v 238 (356)
+++||+||+|++|...++.+...|++|++++++.++.+.+.+.++.. ...|..+..++.+.+.+. ..+.+|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 57999999999999999988889999999999888877665444311 123444434444444432 13579999
Q ss_pred EECCch
Q 042784 239 LDNVGG 244 (356)
Q Consensus 239 ld~~g~ 244 (356)
+.|.|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 999874
No 174
>PRK08017 oxidoreductase; Provisional
Probab=97.53 E-value=0.00056 Score=59.94 Aligned_cols=78 Identities=18% Similarity=0.357 Sum_probs=57.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCc-eeecCChhhHH---HHHHHHCCCCceEEEEC
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD-AFNYNSEMSFD---AALTKYFPNGIDVYLDN 241 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~---~~i~~~~~~~~d~vld~ 241 (356)
++++|+|++|++|..+++.+...|++|++++++.++.+.++ ..+... ..|..+..++. +.+.+..++.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-SLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999999999999999999999999999999988888777 566542 23444433333 33333344578999988
Q ss_pred Cch
Q 042784 242 VGG 244 (356)
Q Consensus 242 ~g~ 244 (356)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 763
No 175
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.0024 Score=55.60 Aligned_cols=81 Identities=21% Similarity=0.258 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC-c--eeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD-D--AFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.+++|+|++|++|..++..+...|++|+++++++++.+.+.+.+ +.. . ..|..+..++.+.+.+.. -+++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999889999999998877665543232 322 1 124444333333333322 1469
Q ss_pred eEEEECCch
Q 042784 236 DVYLDNVGG 244 (356)
Q Consensus 236 d~vld~~g~ 244 (356)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999874
No 176
>PRK06484 short chain dehydrogenase; Validated
Probab=97.51 E-value=0.0015 Score=63.64 Aligned_cols=105 Identities=19% Similarity=0.223 Sum_probs=73.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCc---eeecCChhhHHHHHHHHC--CCCceEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD---AFNYNSEMSFDAALTKYF--PNGIDVY 238 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~i~~~~--~~~~d~v 238 (356)
.|+++||+|+++++|.++++.+...|++|+++++++++.+.+.++++... ..|..+..++.+.+.++. -+.+|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 57899999999999999999888999999999998888877775666432 234444344444443332 2469999
Q ss_pred EECCchh------------h---------------HHHHHHhcccCCEEEEEecccc
Q 042784 239 LDNVGGK------------M---------------LEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 239 ld~~g~~------------~---------------~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
|.+.|.. . .+.++..++.+|+++.++...+
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 404 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS 404 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 9988731 1 2233445566789998876544
No 177
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.51 E-value=0.0016 Score=53.89 Aligned_cols=89 Identities=21% Similarity=0.252 Sum_probs=64.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECC
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNV 242 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~ 242 (356)
-.|.+|.|+|. |.+|...+++++.+|++|++.+++.+...... ..+. .+ .++.+.+.+ .|+|+.+.
T Consensus 34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-~~~~----~~---~~l~ell~~-----aDiv~~~~ 99 (178)
T PF02826_consen 34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-EFGV----EY---VSLDELLAQ-----ADIVSLHL 99 (178)
T ss_dssp STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-HTTE----EE---SSHHHHHHH------SEEEE-S
T ss_pred cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcc-cccc----ee---eehhhhcch-----hhhhhhhh
Confidence 45899999996 99999999999999999999998887766444 4443 22 245555544 79999877
Q ss_pred ch-h-----hHHHHHHhcccCCEEEEEec
Q 042784 243 GG-K-----MLEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 243 g~-~-----~~~~~~~~l~~~G~~v~~g~ 265 (356)
.. + .-...+..++++..+|.++.
T Consensus 100 plt~~T~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 100 PLTPETRGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp SSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred ccccccceeeeeeeeeccccceEEEeccc
Confidence 63 1 23567788998888887655
No 178
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.00073 Score=59.69 Aligned_cols=80 Identities=20% Similarity=0.263 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC-c--eeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD-D--AFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
++.+++|+|++|++|..+++.+...|++|+++++++++.+...+++ +.. . ..|..+..++...+.+.. -+++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999988899999999998877654443232 221 1 234444344444444432 2469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|++|.+.|
T Consensus 88 D~vi~~ag 95 (264)
T PRK07576 88 DVLVSGAA 95 (264)
T ss_pred CEEEECCC
Confidence 99998875
No 179
>PRK06196 oxidoreductase; Provisional
Probab=97.50 E-value=0.00087 Score=60.91 Aligned_cols=80 Identities=18% Similarity=0.270 Sum_probs=57.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCc--eeecCChhhHHHHHHHHC--CCCceEEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD--AFNYNSEMSFDAALTKYF--PNGIDVYL 239 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~--~~~~d~vl 239 (356)
.+.+++|+||+|++|.+++..+...|++|++++++.++.+.+.+++.... ..|..+..++.+.+.++. .+++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 46899999999999999998888899999999998887665543432211 234444344444444432 24799999
Q ss_pred ECCc
Q 042784 240 DNVG 243 (356)
Q Consensus 240 d~~g 243 (356)
.+.|
T Consensus 105 ~nAg 108 (315)
T PRK06196 105 NNAG 108 (315)
T ss_pred ECCC
Confidence 9887
No 180
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0017 Score=56.65 Aligned_cols=103 Identities=18% Similarity=0.236 Sum_probs=64.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHH---hCCC---ceeecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDD-NVKLLKEE---FGYD---DAFNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~-~~~~~~~~---~g~~---~v~~~~~~~~~~~~i~~~~--~~~ 234 (356)
.+.+++|+|++|++|..++..+...|.+|+++.++.+ +.+.+.++ .+.. ...|..+..++...+.++. .++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 3689999999999999999988889999998887643 33333212 2322 1235555344444343322 136
Q ss_pred ceEEEECCchh--------------------hHHHHHHhcccCCEEEEEecc
Q 042784 235 IDVYLDNVGGK--------------------MLEAVLNHVNVHARIILCGMI 266 (356)
Q Consensus 235 ~d~vld~~g~~--------------------~~~~~~~~l~~~G~~v~~g~~ 266 (356)
+|+++.+.|.. .++.+...+...|+++.++..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~ 136 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH 136 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence 89999887531 233444445556888887653
No 181
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0012 Score=58.30 Aligned_cols=81 Identities=19% Similarity=0.338 Sum_probs=56.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCC---ceeecCChhhHHHHHHHHC-CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF----GYD---DAFNYNSEMSFDAALTKYF-PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~----g~~---~v~~~~~~~~~~~~i~~~~-~~~~ 235 (356)
.|+++||+|+++++|.++++.+...|++|+++++++++.+.+.+++ +.. ...|..+..+..+.+.+.. -+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 4789999999999999999999999999999998887766554333 322 1234444333433333332 2469
Q ss_pred eEEEECCch
Q 042784 236 DVYLDNVGG 244 (356)
Q Consensus 236 d~vld~~g~ 244 (356)
|+++.+.|.
T Consensus 87 D~lv~nag~ 95 (263)
T PRK08339 87 DIFFFSTGG 95 (263)
T ss_pred cEEEECCCC
Confidence 999998873
No 182
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.49 E-value=0.001 Score=58.61 Aligned_cols=80 Identities=21% Similarity=0.222 Sum_probs=56.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-c--eeecCChhhHHHHHHHHC--CCCceEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-D--AFNYNSEMSFDAALTKYF--PNGIDVY 238 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d~v 238 (356)
.+.+++|+||+|++|..+++.+...|++|++++++.++.+.+++..+.. . ..|..+..+..+.+.++. -+.+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4789999999999999999999899999999998888777766343422 1 124444333444343322 1468999
Q ss_pred EECCc
Q 042784 239 LDNVG 243 (356)
Q Consensus 239 ld~~g 243 (356)
+.+.|
T Consensus 84 i~~Ag 88 (262)
T TIGR03325 84 IPNAG 88 (262)
T ss_pred EECCC
Confidence 99876
No 183
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.46 E-value=0.0012 Score=60.21 Aligned_cols=80 Identities=16% Similarity=0.290 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC---C-c--eeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGY---D-D--AFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~---~-~--v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+++.. . . ..|..+..++.+.+.++. .+.+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 468899999999999999988888899999999988877665545432 1 1 134444333433333322 3469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|++|++.|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999887
No 184
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.0008 Score=57.84 Aligned_cols=78 Identities=17% Similarity=0.202 Sum_probs=55.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCce--eecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDA--FNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
.+++|+|++|++|...+..+...|++|+++++++++.+.++ +++...+ .|..+..++.+.+.++..+++|+++.+.|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-ALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 57999999999999988888888999999998887766665 4433222 34444344444444444457999999876
Q ss_pred h
Q 042784 244 G 244 (356)
Q Consensus 244 ~ 244 (356)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 3
No 185
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.0009 Score=58.87 Aligned_cols=80 Identities=19% Similarity=0.177 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC-----CC---ceeecCChhhHHHHHHHHC--CC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFG-----YD---DAFNYNSEMSFDAALTKYF--PN 233 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g-----~~---~v~~~~~~~~~~~~i~~~~--~~ 233 (356)
.+.+++|+|++|++|.++++.+...|++|+.+++++++.+.+.+++. .. ...|..+..++.+.+.++. -+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 47899999999999999999988999999999988877665543432 11 1124444334444444332 24
Q ss_pred CceEEEECCc
Q 042784 234 GIDVYLDNVG 243 (356)
Q Consensus 234 ~~d~vld~~g 243 (356)
.+|+++.+.|
T Consensus 86 ~id~li~~ag 95 (260)
T PRK07063 86 PLDVLVNNAG 95 (260)
T ss_pred CCcEEEECCC
Confidence 6999999987
No 186
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.0013 Score=57.37 Aligned_cols=80 Identities=14% Similarity=0.216 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCce---eecCChhhHHHHHHHHC--CCCceEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDA---FNYNSEMSFDAALTKYF--PNGIDVY 238 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v---~~~~~~~~~~~~i~~~~--~~~~d~v 238 (356)
++.+++|+||+|++|...++.+...|++|+++++++++.+.+.++++.... .|..+..+....+.++. .+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 468999999999999999999999999999999887776666556665321 23333233333222221 2469999
Q ss_pred EECCc
Q 042784 239 LDNVG 243 (356)
Q Consensus 239 ld~~g 243 (356)
+.+.|
T Consensus 85 i~~ag 89 (249)
T PRK06500 85 FINAG 89 (249)
T ss_pred EECCC
Confidence 99887
No 187
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.0015 Score=57.51 Aligned_cols=83 Identities=29% Similarity=0.366 Sum_probs=56.9
Q ss_pred CCCCCEEEEEcCCC-hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH----hCCCce----eecCChhhHHHHHHHHC-
Q 042784 162 PKSGSNVFVSAAAG-GVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEE----FGYDDA----FNYNSEMSFDAALTKYF- 231 (356)
Q Consensus 162 ~~~g~~VlV~g~~g-~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~----~g~~~v----~~~~~~~~~~~~i~~~~- 231 (356)
+..+++++|+|++| ++|.++++.+...|++|+++++++++.+...++ +|...+ .|..+..++...+.+..
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 34578999999986 899999999999999999999887766554322 443222 24444333443333321
Q ss_pred -CCCceEEEECCch
Q 042784 232 -PNGIDVYLDNVGG 244 (356)
Q Consensus 232 -~~~~d~vld~~g~ 244 (356)
.+.+|++|.+.|.
T Consensus 94 ~~g~id~li~~ag~ 107 (262)
T PRK07831 94 RLGRLDVLVNNAGL 107 (262)
T ss_pred HcCCCCEEEECCCC
Confidence 2469999999983
No 188
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.0039 Score=55.25 Aligned_cols=78 Identities=18% Similarity=0.234 Sum_probs=53.1
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH---hCCCc----eeecCChhhHHHHHHHHC--CCCceE
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEE---FGYDD----AFNYNSEMSFDAALTKYF--PNGIDV 237 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~---~g~~~----v~~~~~~~~~~~~i~~~~--~~~~d~ 237 (356)
+++|+||+|++|..+++.+...|++|+++++++++.+.+.++ .+... ..|..+..++.+.+.++. .+++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 699999999999999998888999999998887765444322 33321 245555333333333322 246999
Q ss_pred EEECCch
Q 042784 238 YLDNVGG 244 (356)
Q Consensus 238 vld~~g~ 244 (356)
++.+.|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9999873
No 189
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.0012 Score=58.37 Aligned_cols=80 Identities=16% Similarity=0.222 Sum_probs=56.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCCc----eeecCChhhHHHHHHHHC--CC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF----GYDD----AFNYNSEMSFDAALTKYF--PN 233 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~i~~~~--~~ 233 (356)
.+.+++|+|+++++|.+.++.+...|++|+.+++++++.+.+.+++ +... ..|..+..++.+.+.++. -+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999999999999887765544332 1111 234554344444333332 24
Q ss_pred CceEEEECCc
Q 042784 234 GIDVYLDNVG 243 (356)
Q Consensus 234 ~~d~vld~~g 243 (356)
.+|+++.+.|
T Consensus 87 ~id~li~~Ag 96 (265)
T PRK07062 87 GVDMLVNNAG 96 (265)
T ss_pred CCCEEEECCC
Confidence 6999999987
No 190
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.001 Score=59.84 Aligned_cols=81 Identities=22% Similarity=0.398 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC-ce--eecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD-DA--FNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.+++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +.. .. .|..+..++.+.+.++. -+++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999888888999999999987766554332 322 11 24444333434333321 2469
Q ss_pred eEEEECCch
Q 042784 236 DVYLDNVGG 244 (356)
Q Consensus 236 d~vld~~g~ 244 (356)
|+++.|.|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999873
No 191
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.0011 Score=58.06 Aligned_cols=81 Identities=26% Similarity=0.352 Sum_probs=56.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CC-Cce--eecCChhhHHHHHHHHC--CCC
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GY-DDA--FNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~-~~v--~~~~~~~~~~~~i~~~~--~~~ 234 (356)
-.+++++|+|++|++|..++..+...|++|+++++++++.+.+...+ +. ..+ .|..+..++.+.+.++. .+.
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 34789999999999999999999889999999999888766554332 11 112 24443344444443322 246
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|++|.+.|
T Consensus 87 ~d~li~~ag 95 (258)
T PRK06949 87 IDILVNNSG 95 (258)
T ss_pred CCEEEECCC
Confidence 999999988
No 192
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.0011 Score=58.16 Aligned_cols=80 Identities=20% Similarity=0.280 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC---ceeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD---DAFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.++||+|++|++|.++++.+...|++|++++++.++.+.+.+++ +.. ...|..+..++.+.+.++. -+++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999999999999999999899999999998887766655343 221 1234444344444343322 1469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|+++.+.|
T Consensus 88 d~lv~~ag 95 (253)
T PRK05867 88 DIAVCNAG 95 (253)
T ss_pred CEEEECCC
Confidence 99999887
No 193
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.0013 Score=59.77 Aligned_cols=80 Identities=19% Similarity=0.212 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----C-CC---ceeecCChhhHHHHHHHHC--CC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF----G-YD---DAFNYNSEMSFDAALTKYF--PN 233 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~----g-~~---~v~~~~~~~~~~~~i~~~~--~~ 233 (356)
.|.+++|+||++++|.++++.+...|++|+.++++.++.+.+.+++ + .. ...|..+..+..+.+.++. .+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 3689999999999999999888889999999999887765544332 1 11 1234444333333333322 24
Q ss_pred CceEEEECCc
Q 042784 234 GIDVYLDNVG 243 (356)
Q Consensus 234 ~~d~vld~~g 243 (356)
.+|++|.+.|
T Consensus 93 ~iD~li~nAG 102 (313)
T PRK05854 93 PIHLLINNAG 102 (313)
T ss_pred CccEEEECCc
Confidence 6999999887
No 194
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.38 E-value=0.0021 Score=59.82 Aligned_cols=112 Identities=23% Similarity=0.157 Sum_probs=77.8
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhH
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 223 (356)
+|..+....+..+.+..++++|++||-.|. |.|..+..+++..|++|++++.+++..+.+++.. ....++... .++
T Consensus 147 ~L~~Aq~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~-~~l~v~~~~-~D~ 222 (383)
T PRK11705 147 TLEEAQEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERC-AGLPVEIRL-QDY 222 (383)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-ccCeEEEEE-Cch
Confidence 344455556666666778899999999994 5788888999988999999999999999988433 221122111 222
Q ss_pred HHHHHHHCCCCceEEEEC-----Cch----hhHHHHHHhcccCCEEEEEe
Q 042784 224 DAALTKYFPNGIDVYLDN-----VGG----KMLEAVLNHVNVHARIILCG 264 (356)
Q Consensus 224 ~~~i~~~~~~~~d~vld~-----~g~----~~~~~~~~~l~~~G~~v~~g 264 (356)
. ++ .+.+|.|+.. +|. ..+..+.+.|+|+|.++...
T Consensus 223 ~----~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 223 R----DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred h----hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 1 12 2469998753 343 36788889999999988754
No 195
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.37 E-value=0.0049 Score=51.73 Aligned_cols=99 Identities=19% Similarity=0.167 Sum_probs=62.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC----CCc-eeecCChhhHHHHHHHHCCCCceEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFG----YDD-AFNYNSEMSFDAALTKYFPNGIDVY 238 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g----~~~-v~~~~~~~~~~~~i~~~~~~~~d~v 238 (356)
.+.+++|.|++|++|..++..+...|++|+.+.++.++.+.+.+.+. ... ..+..+..++.+.+ .++|+|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~diV 101 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAI-----KGADVV 101 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHH-----hcCCEE
Confidence 57899999999999999888888889999999998888776654442 221 12233223333333 348999
Q ss_pred EECCchhh--HHHHHHhcccCCEEEEEeccc
Q 042784 239 LDNVGGKM--LEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 239 ld~~g~~~--~~~~~~~l~~~G~~v~~g~~~ 267 (356)
|.++.... ........+++-.++.+....
T Consensus 102 i~at~~g~~~~~~~~~~~~~~~vv~D~~~~~ 132 (194)
T cd01078 102 FAAGAAGVELLEKLAWAPKPLAVAADVNAVP 132 (194)
T ss_pred EECCCCCceechhhhcccCceeEEEEccCCC
Confidence 99887653 222222333433455555443
No 196
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.37 E-value=0.0014 Score=57.20 Aligned_cols=81 Identities=20% Similarity=0.292 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--CC---ceeecCChhhHHHHHHHHC--CCCce
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFG--YD---DAFNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g--~~---~v~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
.+.++||+|++|++|..+++.+...|++|+++++++++.+.+...+. .. ...|..+..++...+.+.. .+.+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 36799999999999999998888889999999999887766543443 11 1224444344444443321 24699
Q ss_pred EEEECCch
Q 042784 237 VYLDNVGG 244 (356)
Q Consensus 237 ~vld~~g~ 244 (356)
++|.+.|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99998874
No 197
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.37 E-value=0.0017 Score=56.74 Aligned_cols=80 Identities=18% Similarity=0.255 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH---hCCC---ceeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEE---FGYD---DAFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
++.++||+|++|++|..+++.+...|++|+.+++++++.+.+.++ .+.. ...|..+...+.+.+.++. .+++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999988999999999887765544322 2332 1223333233433344332 1468
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|.+|.+.|
T Consensus 84 d~vi~~ag 91 (253)
T PRK08217 84 NGLINNAG 91 (253)
T ss_pred CEEEECCC
Confidence 99999887
No 198
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0015 Score=58.08 Aligned_cols=81 Identities=21% Similarity=0.204 Sum_probs=57.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC---ceeecCChhhHHHHHHHHC--CCCceEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD---DAFNYNSEMSFDAALTKYF--PNGIDVY 238 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d~v 238 (356)
.+.+++|+|++|++|.+.++.+...|++|+++++++++.+.+.+..+.. ...|..+...+.+.+.+.. -+++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3578999999999999999988889999999999888877666333321 1234444344444444322 1469999
Q ss_pred EECCch
Q 042784 239 LDNVGG 244 (356)
Q Consensus 239 ld~~g~ 244 (356)
+.+.|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999874
No 199
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.0017 Score=57.29 Aligned_cols=80 Identities=15% Similarity=0.212 Sum_probs=55.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC-ce--eecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD-DA--FNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.++||+|++|++|..+++.+...|++|+++++++++.+.+.+.+ +.. .+ .|..+...+.+.+.+.. -+++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999988889999999998887765544332 221 12 34554334433333321 1469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|++|++.|
T Consensus 89 d~vi~~Ag 96 (263)
T PRK07814 89 DIVVNNVG 96 (263)
T ss_pred CEEEECCC
Confidence 99999887
No 200
>PRK06194 hypothetical protein; Provisional
Probab=97.35 E-value=0.0015 Score=58.31 Aligned_cols=80 Identities=18% Similarity=0.265 Sum_probs=54.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCc---eeecCChhhHHHHHHHHC--CCCce
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYDD---AFNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
+.++||+||+|++|..+++.+...|++|++++++.++.+...+++ +... ..|..+..++.+.+.+.. .+++|
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id 85 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH 85 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 678999999999999999988889999999998876655443333 3221 124444334444333321 24689
Q ss_pred EEEECCch
Q 042784 237 VYLDNVGG 244 (356)
Q Consensus 237 ~vld~~g~ 244 (356)
+++.+.|.
T Consensus 86 ~vi~~Ag~ 93 (287)
T PRK06194 86 LLFNNAGV 93 (287)
T ss_pred EEEECCCC
Confidence 99999874
No 201
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0017 Score=57.73 Aligned_cols=80 Identities=19% Similarity=0.346 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCc---eeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYDD---AFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.+++|+|++|++|.+.++.+...|++|+++++++++.+.+.+++ |... ..|..+..++.+.+.+.. -+.+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999998889999999998877665543333 3221 124444334433333321 2469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|+++.+.|
T Consensus 85 d~li~nAg 92 (275)
T PRK05876 85 DVVFSNAG 92 (275)
T ss_pred CEEEECCC
Confidence 99999887
No 202
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0014 Score=57.42 Aligned_cols=80 Identities=19% Similarity=0.195 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC---ceeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD---DAFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.+++|+||+|++|..++..+...|++|+++++++++.+.+.+++ +.. ...|..+..++...+.+.. -+.+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 5789999999999999999988899999999998887765554343 221 2234444344444443332 1468
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|++|.+.|
T Consensus 84 d~vi~~ag 91 (258)
T PRK07890 84 DALVNNAF 91 (258)
T ss_pred cEEEECCc
Confidence 99999886
No 203
>PRK09186 flagellin modification protein A; Provisional
Probab=97.32 E-value=0.0019 Score=56.59 Aligned_cols=80 Identities=16% Similarity=0.187 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCCc----eeecCChhhHHHHHHHHC--CC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF----GYDD----AFNYNSEMSFDAALTKYF--PN 233 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~i~~~~--~~ 233 (356)
.+.+++|+|++|++|...+..+...|++|+++++++++.+.+.+++ +... ..|..+..++.+.+.++. -+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999899999999998887765554343 2211 235554344444444332 24
Q ss_pred CceEEEECCc
Q 042784 234 GIDVYLDNVG 243 (356)
Q Consensus 234 ~~d~vld~~g 243 (356)
++|+++.+.+
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 6999999875
No 204
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0016 Score=57.04 Aligned_cols=80 Identities=25% Similarity=0.352 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCc-e--eecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYDD-A--FNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.+++|+|++|++|..+++.+...|++|+.+++++++.+.+.+++ +... . .|..+..+..+.+.++. -+.+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 3679999999999999999988889999999999888766554333 3221 1 24444333333333322 1469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|+++.+.|
T Consensus 85 d~li~~ag 92 (254)
T PRK07478 85 DIAFNNAG 92 (254)
T ss_pred CEEEECCC
Confidence 99999887
No 205
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.32 E-value=0.002 Score=56.55 Aligned_cols=81 Identities=20% Similarity=0.340 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC-c--eeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD-D--AFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.++||+|++|++|.++++.+...|++|+.+++++++.+.+.+.+ |.. . ..|..+..++.+.+.+.. -+.+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4789999999999999999988888999999998877655443232 221 1 124444344444443322 2469
Q ss_pred eEEEECCch
Q 042784 236 DVYLDNVGG 244 (356)
Q Consensus 236 d~vld~~g~ 244 (356)
|++|.+.|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999873
No 206
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.0021 Score=55.20 Aligned_cols=76 Identities=16% Similarity=0.213 Sum_probs=55.0
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCc-eeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD-AFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
+++|+|++|++|.+.++.+...|++|+.+++++++.+.+.++++... ..|..+..++.+.+.++. +.+|+++.+.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence 58999999999999999888899999999988888776654555431 235555344544444432 35899998764
No 207
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.0023 Score=56.02 Aligned_cols=80 Identities=23% Similarity=0.310 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCc--e--eecCChhhHHHHHHHHC--CCCceE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD--A--FNYNSEMSFDAALTKYF--PNGIDV 237 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~--v--~~~~~~~~~~~~i~~~~--~~~~d~ 237 (356)
.+.++||+||+|++|..+++.+...|++|+.++++++..+... ++.... . .|..+..++.+.+.++. .+++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4689999999999999999888889999999998876555444 332221 1 24443333333333321 146999
Q ss_pred EEECCch
Q 042784 238 YLDNVGG 244 (356)
Q Consensus 238 vld~~g~ 244 (356)
++.+.|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999873
No 208
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.0021 Score=55.56 Aligned_cols=81 Identities=12% Similarity=0.123 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH---hCCCc-eeecCChhhHHHHHHHHC--CCCceE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEE---FGYDD-AFNYNSEMSFDAALTKYF--PNGIDV 237 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~---~g~~~-v~~~~~~~~~~~~i~~~~--~~~~d~ 237 (356)
++.++||+|++|++|..+++.+...|++|++++++.++.....++ .+... ..|..+..++.+.+.+.. -+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 378999999999999999998888899999999876553322212 22221 134444333433333322 147999
Q ss_pred EEECCch
Q 042784 238 YLDNVGG 244 (356)
Q Consensus 238 vld~~g~ 244 (356)
|+.+.|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9998773
No 209
>PRK05717 oxidoreductase; Validated
Probab=97.31 E-value=0.0022 Score=56.23 Aligned_cols=80 Identities=19% Similarity=0.246 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC---ceeecCChhhHHHHHHHHC--CCCceEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD---DAFNYNSEMSFDAALTKYF--PNGIDVY 238 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d~v 238 (356)
.|.+++|+|++|++|..++..+...|++|+.++++.++.+.+.++++.. ...|..+..++.+.+.++. -+.+|++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 88 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL 88 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4789999999999999999888888999999987776655544355532 1234444333333333322 1369999
Q ss_pred EECCc
Q 042784 239 LDNVG 243 (356)
Q Consensus 239 ld~~g 243 (356)
+.+.|
T Consensus 89 i~~ag 93 (255)
T PRK05717 89 VCNAA 93 (255)
T ss_pred EECCC
Confidence 99887
No 210
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0027 Score=55.80 Aligned_cols=79 Identities=18% Similarity=0.223 Sum_probs=55.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-----ceeecCChhhHHHHHHHHC--CCCceE
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-----DAFNYNSEMSFDAALTKYF--PNGIDV 237 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-----~v~~~~~~~~~~~~i~~~~--~~~~d~ 237 (356)
+.+++|+|++|++|...++.+...|++|++++++.++.+.+.+++... ...|..+..++.+.+.++. -+.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 468999999999999999888888999999998888776665343221 1134444344444444332 135899
Q ss_pred EEECCc
Q 042784 238 YLDNVG 243 (356)
Q Consensus 238 vld~~g 243 (356)
++.+.|
T Consensus 82 lv~~ag 87 (257)
T PRK07024 82 VIANAG 87 (257)
T ss_pred EEECCC
Confidence 999877
No 211
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0024 Score=54.72 Aligned_cols=78 Identities=17% Similarity=0.207 Sum_probs=56.2
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-ceeecCChhhHHHHHHHHCCCCceEEEECCch
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-DAFNYNSEMSFDAALTKYFPNGIDVYLDNVGG 244 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~ 244 (356)
++++|+|++|++|..+++.+...|++|+.++++.++.+.++ ..+.. ...|..+..++.+.+.++.+.++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 47999999999999999888788999999998888777766 44543 23344443444444444444579999998764
No 212
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.27 E-value=0.0025 Score=55.95 Aligned_cols=97 Identities=22% Similarity=0.260 Sum_probs=76.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECC---
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNV--- 242 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~--- 242 (356)
-+|.|.|+ |.+|.-+..+|..+|++|...+.+.+|+..+...|+...-.-|++...+.+.+.+ .|++|.++
T Consensus 169 ~kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~-----aDlvIgaVLIp 242 (371)
T COG0686 169 AKVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKK-----ADLVIGAVLIP 242 (371)
T ss_pred ccEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhh-----ccEEEEEEEec
Confidence 45778887 9999999999999999999999999999999977777633445554566666644 89998865
Q ss_pred chh----hHHHHHHhcccCCEEEEEecccc
Q 042784 243 GGK----MLEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 243 g~~----~~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
|.. ..++..+.|+|++.++.+....+
T Consensus 243 gakaPkLvt~e~vk~MkpGsVivDVAiDqG 272 (371)
T COG0686 243 GAKAPKLVTREMVKQMKPGSVIVDVAIDQG 272 (371)
T ss_pred CCCCceehhHHHHHhcCCCcEEEEEEEcCC
Confidence 221 56777899999999999887655
No 213
>PRK06128 oxidoreductase; Provisional
Probab=97.27 E-value=0.0061 Score=54.92 Aligned_cols=104 Identities=17% Similarity=0.293 Sum_probs=64.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChH--HHH----HHHHHhCCCc---eeecCChhhHHHHHHHHC--C
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDD--NVK----LLKEEFGYDD---AFNYNSEMSFDAALTKYF--P 232 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~--~~~----~~~~~~g~~~---v~~~~~~~~~~~~i~~~~--~ 232 (356)
.+.++||+|++|++|.+++..+...|++|+.+.++.+ +.+ .++ ..|... ..|..+..++.+.+.+.. -
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQ-AEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 4789999999999999999888889999988765432 222 222 334321 124444333333333322 2
Q ss_pred CCceEEEECCchh---------------------------hHHHHHHhcccCCEEEEEecccc
Q 042784 233 NGIDVYLDNVGGK---------------------------MLEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 233 ~~~d~vld~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
+++|++|.+.|.. ..+.++..++.+|+++.++....
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~ 195 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS 195 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc
Confidence 4699999988731 11233445566789888776543
No 214
>PLN02253 xanthoxin dehydrogenase
Probab=97.27 E-value=0.0026 Score=56.61 Aligned_cols=80 Identities=21% Similarity=0.216 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-----ceeecCChhhHHHHHHHHC--CCCce
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-----DAFNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-----~v~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
.+.+++|+|++|++|.++++.+...|++|++++++++..+.+.++++.. ...|..+...+.+.+.++. -+++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 3689999999999999999888888999999998776655554344321 1234444344444333322 14699
Q ss_pred EEEECCc
Q 042784 237 VYLDNVG 243 (356)
Q Consensus 237 ~vld~~g 243 (356)
+++.+.|
T Consensus 97 ~li~~Ag 103 (280)
T PLN02253 97 IMVNNAG 103 (280)
T ss_pred EEEECCC
Confidence 9999886
No 215
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.002 Score=56.34 Aligned_cols=79 Identities=14% Similarity=0.161 Sum_probs=54.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC-cee--ecCChhhHHHHHHHHC--CCCce
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD-DAF--NYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~~i~~~~--~~~~d 236 (356)
|.+++|+|++|++|...++.+...|++|+++++++++.+.+.+.+ +.. ..+ |..+..++.+.+.++. -+.+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 478999999999999999999899999999998887665554332 221 122 4444344444343332 24699
Q ss_pred EEEECCc
Q 042784 237 VYLDNVG 243 (356)
Q Consensus 237 ~vld~~g 243 (356)
+++.+.|
T Consensus 81 ~lI~~ag 87 (252)
T PRK07677 81 ALINNAA 87 (252)
T ss_pred EEEECCC
Confidence 9999887
No 216
>PRK06484 short chain dehydrogenase; Validated
Probab=97.26 E-value=0.0021 Score=62.70 Aligned_cols=81 Identities=26% Similarity=0.320 Sum_probs=60.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC---ceeecCChhhHHHHHHHHC--CCCceEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD---DAFNYNSEMSFDAALTKYF--PNGIDVY 238 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d~v 238 (356)
.+++++|+|+++++|.++++.+...|++|+.++++.++.+.+.++++.. ...|..+..++.+.+.++. .+++|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999999999999999999999999999999888877766566643 2245554444444444432 2469999
Q ss_pred EECCch
Q 042784 239 LDNVGG 244 (356)
Q Consensus 239 ld~~g~ 244 (356)
+.+.|.
T Consensus 84 i~nag~ 89 (520)
T PRK06484 84 VNNAGV 89 (520)
T ss_pred EECCCc
Confidence 998763
No 217
>PRK08643 acetoin reductase; Validated
Probab=97.23 E-value=0.0021 Score=56.29 Aligned_cols=80 Identities=16% Similarity=0.197 Sum_probs=55.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC---ceeecCChhhHHHHHHHHC--CCCce
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD---DAFNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
++++||+|++|++|..+++.+...|++|+.++++.++.+.+..++ +.. ...|..+...+.+.+.++. .+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999889999999998887665554332 221 1124444344444343332 24699
Q ss_pred EEEECCch
Q 042784 237 VYLDNVGG 244 (356)
Q Consensus 237 ~vld~~g~ 244 (356)
++|.+.|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99998863
No 218
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0033 Score=55.80 Aligned_cols=79 Identities=22% Similarity=0.313 Sum_probs=55.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCc---eeecCChhhHHHHHHHHC--CCCceEEEE
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD---AFNYNSEMSFDAALTKYF--PNGIDVYLD 240 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~i~~~~--~~~~d~vld 240 (356)
.++||+|++|++|...++.+...|.+|+++++++++.+.+++.++... ..|..+...+.+.+.+.. .+++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 579999999999999998888889999999999888777664443321 234444344444444321 246899999
Q ss_pred CCch
Q 042784 241 NVGG 244 (356)
Q Consensus 241 ~~g~ 244 (356)
+.|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 8873
No 219
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.21 E-value=0.0075 Score=53.03 Aligned_cols=80 Identities=14% Similarity=0.131 Sum_probs=52.7
Q ss_pred CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCC---hHHHHHHHHHhCCCc----eeecCChhhHHHHHHHHC--C
Q 042784 164 SGSNVFVSAAA--GGVGMFAGQLAKLKGCKVVGSTGS---DDNVKLLKEEFGYDD----AFNYNSEMSFDAALTKYF--P 232 (356)
Q Consensus 164 ~g~~VlV~g~~--g~vG~~~i~la~~~G~~V~~~~~s---~~~~~~~~~~~g~~~----v~~~~~~~~~~~~i~~~~--~ 232 (356)
.|++++|+|++ +++|.++++.+...|++|+.++++ +++.+.+.+++.... ..|..+..+..+.+.++. -
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 47899999996 799999998888899999988654 344454543442111 234444344444444432 1
Q ss_pred CCceEEEECCc
Q 042784 233 NGIDVYLDNVG 243 (356)
Q Consensus 233 ~~~d~vld~~g 243 (356)
+.+|+++.|.|
T Consensus 86 g~ld~lv~nag 96 (257)
T PRK08594 86 GVIHGVAHCIA 96 (257)
T ss_pred CCccEEEECcc
Confidence 56999998876
No 220
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.21 E-value=0.0031 Score=55.02 Aligned_cols=77 Identities=23% Similarity=0.359 Sum_probs=55.2
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCc---eeecCChhhHHHHHHHHC--CCCceEEEEC
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD---AFNYNSEMSFDAALTKYF--PNGIDVYLDN 241 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~i~~~~--~~~~d~vld~ 241 (356)
+++|+|++|++|.+.+..+...|++|+++++++++.+.+.+.++... ..|..+..++.+.+.++. .+++|.++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 68999999999999999998899999999999888777664555421 124444334444343332 2469999998
Q ss_pred Cc
Q 042784 242 VG 243 (356)
Q Consensus 242 ~g 243 (356)
.|
T Consensus 82 ag 83 (248)
T PRK10538 82 AG 83 (248)
T ss_pred CC
Confidence 76
No 221
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.20 E-value=0.0017 Score=54.26 Aligned_cols=97 Identities=22% Similarity=0.301 Sum_probs=69.0
Q ss_pred HhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHH----HHHHhCCCceeecCChhhHHHHHHHHCC-
Q 042784 158 VLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKL----LKEEFGYDDAFNYNSEMSFDAALTKYFP- 232 (356)
Q Consensus 158 ~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~----~~~~~g~~~v~~~~~~~~~~~~i~~~~~- 232 (356)
+...+++|++||=+| +|.|+.++-+++..| +|+.+.+.++=.+. ++ .+|...+..... |-. .-+..
T Consensus 66 ~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~-~lg~~nV~v~~g--DG~---~G~~~~ 136 (209)
T COG2518 66 QLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLE-TLGYENVTVRHG--DGS---KGWPEE 136 (209)
T ss_pred HHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHH-HcCCCceEEEEC--Ccc---cCCCCC
Confidence 567899999999999 678999999999998 99999977653333 44 677754432221 110 00111
Q ss_pred CCceEEEECCchh-hHHHHHHhcccCCEEEEE
Q 042784 233 NGIDVYLDNVGGK-MLEAVLNHVNVHARIILC 263 (356)
Q Consensus 233 ~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~ 263 (356)
..||.++-+.+.+ .-...++.|+++|+++..
T Consensus 137 aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 137 APYDRIIVTAAAPEVPEALLDQLKPGGRLVIP 168 (209)
T ss_pred CCcCEEEEeeccCCCCHHHHHhcccCCEEEEE
Confidence 4699999887765 446788999999998864
No 222
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.20 E-value=0.004 Score=58.80 Aligned_cols=140 Identities=15% Similarity=0.146 Sum_probs=86.3
Q ss_pred eeeeEEEEEeccCCCCCCCCCEEEec-------------------cCCeeeEEeecCCcccccCCCCCCCCccccccccC
Q 042784 86 ILAFGIARVIRSKDSKYSDGDIVLRA-------------------FLPVAEYSLLPCDLLTRKLDPASGIPFPDYLSSLG 146 (356)
Q Consensus 86 ~~~~G~v~~vg~~v~~~~~Gd~V~~~-------------------~g~~a~~~~v~~~~~~~~i~~P~~~s~~~~aa~l~ 146 (356)
.+..+.+..|+++.+..-+|+.-+++ .+.|++++.++. .+ +. --+++. ..++
T Consensus 92 ~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~v-r~---~t~i~~----~~vS 162 (417)
T TIGR01035 92 ESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RV-RT---ETDISA----GAVS 162 (417)
T ss_pred hHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hh-hh---hcCCCC----CCcC
Confidence 45667777788877765566654422 145788877765 33 21 011111 1111
Q ss_pred chhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeecCChhhHHH
Q 042784 147 IPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDA 225 (356)
Q Consensus 147 ~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~ 225 (356)
.+....-.+. +.....++++|+|.|+ |.+|..+++.++..|+ +|+++.++.++.+.+.+.+|.. .+++ .++.+
T Consensus 163 v~~~Av~la~-~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~---~~l~~ 236 (417)
T TIGR01035 163 ISSAAVELAE-RIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF---EDLEE 236 (417)
T ss_pred HHHHHHHHHH-HHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH---HHHHH
Confidence 1211111222 2233356899999997 9999999999999995 8999999988866444477764 3333 23333
Q ss_pred HHHHHCCCCceEEEECCchh
Q 042784 226 ALTKYFPNGIDVYLDNVGGK 245 (356)
Q Consensus 226 ~i~~~~~~~~d~vld~~g~~ 245 (356)
.+. ++|+||+|++.+
T Consensus 237 ~l~-----~aDvVi~aT~s~ 251 (417)
T TIGR01035 237 YLA-----EADIVISSTGAP 251 (417)
T ss_pred HHh-----hCCEEEECCCCC
Confidence 332 589999999874
No 223
>PRK08589 short chain dehydrogenase; Validated
Probab=97.19 E-value=0.0028 Score=56.19 Aligned_cols=79 Identities=15% Similarity=0.210 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC---ceeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD---DAFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.++||+|+++++|.++++.+...|++|++++++ ++.+.+.+++ +.. ...|..+..++.+.+.++. -+.+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 47899999999999999998888889999999988 4433322233 321 1234444334444333332 2469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|+++.+.|
T Consensus 84 d~li~~Ag 91 (272)
T PRK08589 84 DVLFNNAG 91 (272)
T ss_pred CEEEECCC
Confidence 99999886
No 224
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0026 Score=55.50 Aligned_cols=80 Identities=20% Similarity=0.241 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC---ceeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD---DAFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.+++|+|++|++|..+++.+...|++|+.+++++++.+.+.+.+ +.. ...|..+..++...+.+.. .+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4688999999999999999888888999999998876654443232 211 1234444333333333221 1369
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|++|.+.|
T Consensus 85 d~vi~~ag 92 (250)
T PRK07774 85 DYLVNNAA 92 (250)
T ss_pred CEEEECCC
Confidence 99999887
No 225
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.19 E-value=0.0033 Score=55.19 Aligned_cols=79 Identities=22% Similarity=0.302 Sum_probs=56.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-c--eeecCChhhHHHHHHHHC--CCCceEEE
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-D--AFNYNSEMSFDAALTKYF--PNGIDVYL 239 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d~vl 239 (356)
+.+++|+|++|++|..+++.+...|++|+.++++.++.+.+.++++.. . ..|..+..++.+.+.++. -+.+|+++
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 85 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILF 85 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 678999999999999999999889999999998888777666455432 1 123334334444343332 24699999
Q ss_pred ECCc
Q 042784 240 DNVG 243 (356)
Q Consensus 240 d~~g 243 (356)
.+.|
T Consensus 86 ~~ag 89 (257)
T PRK07067 86 NNAA 89 (257)
T ss_pred ECCC
Confidence 9876
No 226
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.18 E-value=0.0029 Score=57.67 Aligned_cols=80 Identities=18% Similarity=0.230 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCCc----eeecCC-hhhHHHHHHHHCCC-
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF----GYDD----AFNYNS-EMSFDAALTKYFPN- 233 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~----g~~~----v~~~~~-~~~~~~~i~~~~~~- 233 (356)
.|.+++|+||++++|.+.++.+...|++|+.+++++++.+.+.+++ +... ..|..+ ..+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 5899999999999999988888788999999999998876654332 2111 234432 12333344443332
Q ss_pred CceEEEECCc
Q 042784 234 GIDVYLDNVG 243 (356)
Q Consensus 234 ~~d~vld~~g 243 (356)
.+|+++++.|
T Consensus 132 didilVnnAG 141 (320)
T PLN02780 132 DVGVLINNVG 141 (320)
T ss_pred CccEEEEecC
Confidence 5779998876
No 227
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0026 Score=57.54 Aligned_cols=80 Identities=26% Similarity=0.253 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCCc----eeecCChhhHHHHHHHHC--CC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF----GYDD----AFNYNSEMSFDAALTKYF--PN 233 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~i~~~~--~~ 233 (356)
.+.+|+|+||+|++|..+++.+...|++|++++++.++.+.+.+++ +... ..|..+..++.+.+.++. -+
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 5789999999999999999888888999999998877655433222 1111 124444334443344332 24
Q ss_pred CceEEEECCc
Q 042784 234 GIDVYLDNVG 243 (356)
Q Consensus 234 ~~d~vld~~g 243 (356)
++|++|.+.|
T Consensus 95 ~iD~li~nAg 104 (306)
T PRK06197 95 RIDLLINNAG 104 (306)
T ss_pred CCCEEEECCc
Confidence 6999999887
No 228
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0042 Score=54.76 Aligned_cols=81 Identities=20% Similarity=0.305 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--CCC-ce--eecCChhhHHHHHHHHC-CCCceE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF--GYD-DA--FNYNSEMSFDAALTKYF-PNGIDV 237 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~--g~~-~v--~~~~~~~~~~~~i~~~~-~~~~d~ 237 (356)
++.+++|+||+|++|...+..+...|++|+++++++++.+.+..++ +.. .. .|..+..++.+.+.... -+.+|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999999999999999988889999999999888776665343 111 11 23333233332222221 256999
Q ss_pred EEECCch
Q 042784 238 YLDNVGG 244 (356)
Q Consensus 238 vld~~g~ 244 (356)
++.+.|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9998874
No 229
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.17 E-value=0.0031 Score=55.50 Aligned_cols=78 Identities=26% Similarity=0.369 Sum_probs=53.8
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCce--eecCChhhHHHHHHHHC--CCCceEEE
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYDDA--FNYNSEMSFDAALTKYF--PNGIDVYL 239 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~~v--~~~~~~~~~~~~i~~~~--~~~~d~vl 239 (356)
+++|+|+++++|.++++.+...|++|+.+++++++.+.+.+++ +.... .|..+..++.+.+.+.. -+++|+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6899999999999999888889999999998887765554333 22112 24444344444444332 24699999
Q ss_pred ECCch
Q 042784 240 DNVGG 244 (356)
Q Consensus 240 d~~g~ 244 (356)
.+.|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 98873
No 230
>PRK09242 tropinone reductase; Provisional
Probab=97.17 E-value=0.0031 Score=55.29 Aligned_cols=81 Identities=19% Similarity=0.284 Sum_probs=56.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCCc---eeecCChhhHHHHHHHHC--CC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF-----GYDD---AFNYNSEMSFDAALTKYF--PN 233 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~i~~~~--~~ 233 (356)
.+.+++|+|++|++|..+++.+...|++|++++++.++.+.+.+++ +... ..|..+..++.+.+.+.. -+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999998887765554332 2211 124444333333333321 24
Q ss_pred CceEEEECCch
Q 042784 234 GIDVYLDNVGG 244 (356)
Q Consensus 234 ~~d~vld~~g~ 244 (356)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 69999999874
No 231
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.0021 Score=55.49 Aligned_cols=80 Identities=15% Similarity=0.133 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH---hCCCc-e--eecCChhhHHHHHH---HHCCCC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEE---FGYDD-A--FNYNSEMSFDAALT---KYFPNG 234 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~i~---~~~~~~ 234 (356)
.|.+++|+|+++++|.+.+..+...|++|+.+.+++++.+.+.++ .+... . .|..+..++.+.+. +..++.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 478999999999999999988888999999999888876554322 34321 1 23334333333333 322337
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|+++.+.|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999986
No 232
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0027 Score=55.67 Aligned_cols=83 Identities=14% Similarity=0.145 Sum_probs=53.0
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCChHH-HHHHHHH---hCC-C-ce--eecCChhhHHHHHHHHC-
Q 042784 162 PKSGSNVFVSAAAGGVGMFAGQLAKLK-GCKVVGSTGSDDN-VKLLKEE---FGY-D-DA--FNYNSEMSFDAALTKYF- 231 (356)
Q Consensus 162 ~~~g~~VlV~g~~g~vG~~~i~la~~~-G~~V~~~~~s~~~-~~~~~~~---~g~-~-~v--~~~~~~~~~~~~i~~~~- 231 (356)
+..+.+|+|+||+|++|.+.++-+... |++|+++++++++ .+.+.++ .+. . ++ .|..+..++.+.+.+..
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 456789999999999999988776666 5899999988765 4333222 232 1 12 34444333333344332
Q ss_pred CCCceEEEECCch
Q 042784 232 PNGIDVYLDNVGG 244 (356)
Q Consensus 232 ~~~~d~vld~~g~ 244 (356)
.+++|+++.+.|.
T Consensus 85 ~g~id~li~~ag~ 97 (253)
T PRK07904 85 GGDVDVAIVAFGL 97 (253)
T ss_pred cCCCCEEEEeeec
Confidence 2579999987764
No 233
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.16 E-value=0.0043 Score=56.41 Aligned_cols=94 Identities=17% Similarity=0.238 Sum_probs=62.1
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCce-eecCChhhHHHHHHHHCCCCceEEEECCchh
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDA-FNYNSEMSFDAALTKYFPNGIDVYLDNVGGK 245 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v-~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~ 245 (356)
+|+|+||+|-+|...+..+...|.+|.+++++.++...+. ..+...+ .|..+..++.+.+ .++|+||++++..
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~al-----~g~d~Vi~~~~~~ 75 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLPETLPPSF-----KGVTAIIDASTSR 75 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCHHHHHHHH-----CCCCEEEECCCCC
Confidence 6999999999999999888888999999998877665554 4455322 1344323343333 3589999987531
Q ss_pred -------------hHHHHHHhcccCC--EEEEEecc
Q 042784 246 -------------MLEAVLNHVNVHA--RIILCGMI 266 (356)
Q Consensus 246 -------------~~~~~~~~l~~~G--~~v~~g~~ 266 (356)
.....++.++..| +++.++..
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 1123444444444 78877653
No 234
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.16 E-value=0.0043 Score=54.30 Aligned_cols=80 Identities=25% Similarity=0.372 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC---ceeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD---DAFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.++||+|++|++|...++.+...|.+|+++++++++.+.+..++ +.. ...|..+..++.+.+.++. .+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3679999999999999999888888999999998887765543232 322 1224444344433333322 2369
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|++|.+.|
T Consensus 83 d~vi~~a~ 90 (258)
T PRK12429 83 DILVNNAG 90 (258)
T ss_pred CEEEECCC
Confidence 99999887
No 235
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0041 Score=55.20 Aligned_cols=80 Identities=14% Similarity=0.093 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC-----CC-ce--eecCChhhHHHHHHHHC--CC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFG-----YD-DA--FNYNSEMSFDAALTKYF--PN 233 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g-----~~-~v--~~~~~~~~~~~~i~~~~--~~ 233 (356)
.+.++||+|++|++|..+++.+...|++|+.+++++++.+...+++. .. .+ .|..+..++...+.+.. .+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 36899999999999999999999999999999988776554432321 11 12 24444334444444332 24
Q ss_pred CceEEEECCc
Q 042784 234 GIDVYLDNVG 243 (356)
Q Consensus 234 ~~d~vld~~g 243 (356)
++|++|.+.|
T Consensus 86 ~~d~li~~ag 95 (276)
T PRK05875 86 RLHGVVHCAG 95 (276)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 236
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.16 E-value=0.0026 Score=55.78 Aligned_cols=113 Identities=19% Similarity=0.202 Sum_probs=78.6
Q ss_pred hhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---HhCCCceeecCChhhHH
Q 042784 148 PGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFD 224 (356)
Q Consensus 148 ~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~ 224 (356)
+=..+...+.+..++++|++||=+| -|-|.+++.+|+..|++|++++-|++..+.+++ +.|...-+...- .++
T Consensus 56 AQ~~k~~~~~~kl~L~~G~~lLDiG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l-~d~- 131 (283)
T COG2230 56 AQRAKLDLILEKLGLKPGMTLLDIG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRL-QDY- 131 (283)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEeC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEe-ccc-
Confidence 3456667777789999999999999 356888999999999999999999998877764 344431111100 111
Q ss_pred HHHHHHCCCCceEEEE-----CCch----hhHHHHHHhcccCCEEEEEecccc
Q 042784 225 AALTKYFPNGIDVYLD-----NVGG----KMLEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 225 ~~i~~~~~~~~d~vld-----~~g~----~~~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
+.+. +.||-|+- .+|. ..+..+.+.|+++|++++......
T Consensus 132 ---rd~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~ 180 (283)
T COG2230 132 ---RDFE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGP 180 (283)
T ss_pred ---cccc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCC
Confidence 1111 23777753 4454 267888899999999987766554
No 237
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0036 Score=55.73 Aligned_cols=79 Identities=16% Similarity=0.275 Sum_probs=54.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH---hCC--C-c--eeecCChhhHHHHHHHHC--CCC
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEE---FGY--D-D--AFNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~---~g~--~-~--v~~~~~~~~~~~~i~~~~--~~~ 234 (356)
+.++||+||+|++|...+..+...|++|+++++++++.+.+.+. .+. . . ..|..+..++.+ +.+.. -++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~ 81 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR 81 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence 57899999999999999988888899999999887766554322 221 1 1 224554344444 44432 246
Q ss_pred ceEEEECCch
Q 042784 235 IDVYLDNVGG 244 (356)
Q Consensus 235 ~d~vld~~g~ 244 (356)
+|+++.|.|.
T Consensus 82 id~vv~~ag~ 91 (280)
T PRK06914 82 IDLLVNNAGY 91 (280)
T ss_pred eeEEEECCcc
Confidence 8999999873
No 238
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.15 E-value=0.0036 Score=54.96 Aligned_cols=80 Identities=20% Similarity=0.334 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC---ceeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD---DAFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.++||+|++|++|...++.+...|++|++++++.++.+.+.+.+ +.. ...|..+..++...+.++. .+++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999999999999999888889999999998887766554332 221 1234444344433333322 1469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|.++.+.|
T Consensus 91 d~vi~~ag 98 (259)
T PRK08213 91 DILVNNAG 98 (259)
T ss_pred CEEEECCC
Confidence 99999987
No 239
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0037 Score=54.98 Aligned_cols=78 Identities=22% Similarity=0.435 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCC-ce--eecCChhhHHHHHHHHCCCCce
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF----GYD-DA--FNYNSEMSFDAALTKYFPNGID 236 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~i~~~~~~~~d 236 (356)
.+.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+++ +.. .. .|..+..++.+.+.+. +.+|
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id 83 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID 83 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence 3789999999999999999888889999999998887766544333 221 12 2334333444434332 4699
Q ss_pred EEEECCc
Q 042784 237 VYLDNVG 243 (356)
Q Consensus 237 ~vld~~g 243 (356)
+++.+.|
T Consensus 84 ~lv~~ag 90 (259)
T PRK06125 84 ILVNNAG 90 (259)
T ss_pred EEEECCC
Confidence 9999887
No 240
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0045 Score=53.68 Aligned_cols=80 Identities=19% Similarity=0.281 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC----ceeecCC--h---hhHHHHHHHHC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD----DAFNYNS--E---MSFDAALTKYF 231 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~----~v~~~~~--~---~~~~~~i~~~~ 231 (356)
.+.+++|+|++|++|...++.+...|++|+++++++++.+.+.+++ +.. ...|..+ . ..+.+.+.+..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 4679999999999999999888889999999999888766554332 211 1123321 1 22333344333
Q ss_pred CCCceEEEECCc
Q 042784 232 PNGIDVYLDNVG 243 (356)
Q Consensus 232 ~~~~d~vld~~g 243 (356)
++.+|.+|.+.|
T Consensus 85 ~~~id~vi~~ag 96 (239)
T PRK08703 85 QGKLDGIVHCAG 96 (239)
T ss_pred CCCCCEEEEecc
Confidence 356899999887
No 241
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.14 E-value=0.0043 Score=56.34 Aligned_cols=79 Identities=15% Similarity=0.246 Sum_probs=55.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHhCCC----c--eeecCChhhHHHHHHHHC--CCCc
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKG-CKVVGSTGSDDNVKLLKEEFGYD----D--AFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G-~~V~~~~~s~~~~~~~~~~~g~~----~--v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
+.+++|+|+++++|.++++.+...| ++|+.+++++++.+.+.++++.. . ..|..+..++.+.+.++. .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5689999999999999988888889 89999998888776655455421 1 134544334443343332 2469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|++|.+.|
T Consensus 83 D~lI~nAG 90 (314)
T TIGR01289 83 DALVCNAA 90 (314)
T ss_pred CEEEECCC
Confidence 99999876
No 242
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.12 E-value=0.0046 Score=58.08 Aligned_cols=74 Identities=14% Similarity=0.154 Sum_probs=56.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEEC
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDN 241 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~ 241 (356)
-.+.+|+|.|+ |++|.+++..+...|+ +|+++.++.++.+.+.++++...++.+ .++.+.+ ..+|+||.|
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~---~~l~~~l-----~~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL---SELPQLI-----KKADIIIAA 249 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH---HHHHHHh-----ccCCEEEEC
Confidence 45789999997 9999999999999997 899999998887777767763223333 2333333 348999999
Q ss_pred Cchh
Q 042784 242 VGGK 245 (356)
Q Consensus 242 ~g~~ 245 (356)
++.+
T Consensus 250 T~a~ 253 (414)
T PRK13940 250 VNVL 253 (414)
T ss_pred cCCC
Confidence 9986
No 243
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.12 E-value=0.0052 Score=53.98 Aligned_cols=79 Identities=28% Similarity=0.307 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC---ceeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD---DAFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.+++|+|++|++|.++++.+...|++|+++++++...+... ++ +.. ...|..+..+..+.+.++. -+++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAA-ELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHH-HHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999999999999988889999999987754333322 32 332 1235554334444444332 2469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|+++.+.|
T Consensus 86 d~lv~nAg 93 (260)
T PRK12823 86 DVLINNVG 93 (260)
T ss_pred eEEEECCc
Confidence 99999987
No 244
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.12 E-value=0.0039 Score=55.41 Aligned_cols=105 Identities=14% Similarity=0.174 Sum_probs=68.4
Q ss_pred CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCChH---HHHHHHHHhCCCc--eeecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAAA--GGVGMFAGQLAKLKGCKVVGSTGSDD---NVKLLKEEFGYDD--AFNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~~--g~vG~~~i~la~~~G~~V~~~~~s~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~--~~~ 234 (356)
.+++++|+||+ +++|.++++.+...|++|+.++++++ +.+.+.++++... ..|..+..++.+.+.++. -+.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 37899999996 79999999888889999999887742 3343433555432 235554344444444332 246
Q ss_pred ceEEEECCchh------------------------------hHHHHHHhcccCCEEEEEecccc
Q 042784 235 IDVYLDNVGGK------------------------------MLEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 235 ~d~vld~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
+|+++.+.|.. ..+.++..++.+|+++.++...+
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~ 147 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG 147 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC
Confidence 99999988730 11334455667799988876443
No 245
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0049 Score=54.75 Aligned_cols=80 Identities=21% Similarity=0.264 Sum_probs=56.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-c--eeecCChhhHHHHHHHHC--CCCceEEE
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-D--AFNYNSEMSFDAALTKYF--PNGIDVYL 239 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d~vl 239 (356)
+.+|||+|++|++|..+++.+...|++|++++++.++.+.+.+.++.. . ..|..+..++.+.+.++. -+++|+++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999999888888999999999888777665444322 1 134444344444333322 14689999
Q ss_pred ECCch
Q 042784 240 DNVGG 244 (356)
Q Consensus 240 d~~g~ 244 (356)
.|.|.
T Consensus 83 ~~ag~ 87 (275)
T PRK08263 83 NNAGY 87 (275)
T ss_pred ECCCC
Confidence 99873
No 246
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.12 E-value=0.0046 Score=54.90 Aligned_cols=80 Identities=16% Similarity=0.170 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEeCChHHH---HHHHHHhCCCce--eecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAAAG--GVGMFAGQLAKLKGCKVVGSTGSDDNV---KLLKEEFGYDDA--FNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~~g--~vG~~~i~la~~~G~~V~~~~~s~~~~---~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~--~~~ 234 (356)
.++++||+|+++ ++|.++++.+...|++|+.++++++.. +.+.+++|.... .|..+..++.+.+.++. -+.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 478999999986 999999998888999999988765322 233224453322 35554344444444432 247
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|+++++.|
T Consensus 86 iD~lVnnAG 94 (271)
T PRK06505 86 LDFVVHAIG 94 (271)
T ss_pred CCEEEECCc
Confidence 999999887
No 247
>PRK07985 oxidoreductase; Provisional
Probab=97.12 E-value=0.007 Score=54.41 Aligned_cols=105 Identities=17% Similarity=0.171 Sum_probs=65.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCh--HHHHHHHH---HhCCC---ceeecCChhhHHHHHHHHC--CC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSD--DNVKLLKE---EFGYD---DAFNYNSEMSFDAALTKYF--PN 233 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~--~~~~~~~~---~~g~~---~v~~~~~~~~~~~~i~~~~--~~ 233 (356)
.+.+++|+|++|++|.++++.+...|++|+++.++. ++.+.+.+ +.|.. ...|..+..++.+.+.+.. -+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 467999999999999999998888999998876432 23333321 22322 1234444344444444432 24
Q ss_pred CceEEEECCchh---------------------------hHHHHHHhcccCCEEEEEecccc
Q 042784 234 GIDVYLDNVGGK---------------------------MLEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 234 ~~d~vld~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
++|+++.+.|.. ..+.++..++.+|+++.++....
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~ 189 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA 189 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh
Confidence 699999887620 11233444556789988876543
No 248
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0026 Score=55.51 Aligned_cols=73 Identities=27% Similarity=0.391 Sum_probs=48.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHhCCCc--eeecCChhhHHHHHHHHCCCCceEEEEC
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSD-DNVKLLKEEFGYDD--AFNYNSEMSFDAALTKYFPNGIDVYLDN 241 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~-~~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~~~~~d~vld~ 241 (356)
+++++|+||+|++|.++++.+...|++|+++++++ ++.+... . +... ..|..+..++ .+.. +++|+++++
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~-~~~~~~~~D~~~~~~~----~~~~-~~iDilVnn 86 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-E-SPNEWIKWECGKEESL----DKQL-ASLDVLILN 86 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-c-CCCeEEEeeCCCHHHH----HHhc-CCCCEEEEC
Confidence 68999999999999999998889999999998775 2222211 1 2111 2344432222 2222 359999999
Q ss_pred Cch
Q 042784 242 VGG 244 (356)
Q Consensus 242 ~g~ 244 (356)
.|.
T Consensus 87 AG~ 89 (245)
T PRK12367 87 HGI 89 (245)
T ss_pred Ccc
Confidence 873
No 249
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0033 Score=54.89 Aligned_cols=81 Identities=21% Similarity=0.246 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--CCC-ce--eecCChhhHHHHHHHHC--CCCce
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF--GYD-DA--FNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~--g~~-~v--~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
.+.+++|+|++|++|..+++.+...|++|+.++++.++.+...+.+ +.. .. .|..+..++.+.+.++. -+++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3679999999999999999888788999999998877665544333 221 12 23444334444333332 14799
Q ss_pred EEEECCch
Q 042784 237 VYLDNVGG 244 (356)
Q Consensus 237 ~vld~~g~ 244 (356)
+++.+.|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999883
No 250
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0039 Score=54.30 Aligned_cols=79 Identities=20% Similarity=0.319 Sum_probs=54.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCC-c--eeecCChhhHHHHHHHHC--CCC
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF-----GYD-D--AFNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~i~~~~--~~~ 234 (356)
+.+++|+|++|++|...++.+...|++|+++++++++.+.+...+ +.. + ..|..+..++.+.+.++. -++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999988888788999999998887766554222 211 1 134554344444444432 246
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|+++.+.|
T Consensus 82 id~vi~~ag 90 (248)
T PRK08251 82 LDRVIVNAG 90 (248)
T ss_pred CCEEEECCC
Confidence 999999887
No 251
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.11 E-value=0.0035 Score=54.64 Aligned_cols=80 Identities=19% Similarity=0.241 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHhCCC-c--eeecCChhhHHHHHHHHC--CCCce
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDN--VKLLKEEFGYD-D--AFNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~--~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
.+.++||+|++|++|..++..+...|++|+.+++++.. .+.++ +++.. . ..|..+..++...+.+.. .+++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE-ALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47899999999999999998888899999999876521 22233 44432 1 134444344444444332 24699
Q ss_pred EEEECCch
Q 042784 237 VYLDNVGG 244 (356)
Q Consensus 237 ~vld~~g~ 244 (356)
+++.+.|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99998863
No 252
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.004 Score=54.44 Aligned_cols=81 Identities=20% Similarity=0.202 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---HhCCC-ce--eecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKE---EFGYD-DA--FNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.+++|+|++|++|..+++.+...|++|+.+++++++.+.+.+ +.+.. .. .|..+..++.+.+.+.. -+.+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 47899999999999999998888889999999998876544432 23322 11 24443333333333321 1468
Q ss_pred eEEEECCch
Q 042784 236 DVYLDNVGG 244 (356)
Q Consensus 236 d~vld~~g~ 244 (356)
|+++.+.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999998873
No 253
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0042 Score=54.29 Aligned_cols=79 Identities=20% Similarity=0.330 Sum_probs=54.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC-ce--eecCChhhHHHHHHHHC--CCCce
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD-DA--FNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
+.+++|+|++|++|.+.++.+...|++|+.++++.++.+.+.+++ +.. .. .|..+..++.+.+.+.. -+.+|
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 87 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLD 87 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999889999999998877665554332 221 11 24444333333333322 13589
Q ss_pred EEEECCc
Q 042784 237 VYLDNVG 243 (356)
Q Consensus 237 ~vld~~g 243 (356)
+++.+.|
T Consensus 88 ~li~~ag 94 (252)
T PRK07035 88 ILVNNAA 94 (252)
T ss_pred EEEECCC
Confidence 9999887
No 254
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.10 E-value=0.0035 Score=56.17 Aligned_cols=96 Identities=21% Similarity=0.213 Sum_probs=64.2
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHh---CCCc-eeecCChhhHHHHHHHHCCCCce
Q 042784 162 PKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEF---GYDD-AFNYNSEMSFDAALTKYFPNGID 236 (356)
Q Consensus 162 ~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~---g~~~-v~~~~~~~~~~~~i~~~~~~~~d 236 (356)
..++++||-.|. |. |..++.+++ .|+ +|++++.++...+.+++.+ +... +.... .+ +.....+.||
T Consensus 157 ~~~g~~VLDvGc-Gs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~--~~----~~~~~~~~fD 227 (288)
T TIGR00406 157 DLKDKNVIDVGC-GS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL--IY----LEQPIEGKAD 227 (288)
T ss_pred cCCCCEEEEeCC-Ch-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe--cc----cccccCCCce
Confidence 457899999995 55 888877776 566 9999999988877776422 2211 11111 11 1112235799
Q ss_pred EEEECCchh----hHHHHHHhcccCCEEEEEecc
Q 042784 237 VYLDNVGGK----MLEAVLNHVNVHARIILCGMI 266 (356)
Q Consensus 237 ~vld~~g~~----~~~~~~~~l~~~G~~v~~g~~ 266 (356)
+|+.+.... .+..+.+.|+++|.++..|..
T Consensus 228 lVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 228 VIVANILAEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred EEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 999866443 567778999999999987653
No 255
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.002 Score=56.95 Aligned_cols=77 Identities=21% Similarity=0.362 Sum_probs=54.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-ceeecCChhhHHHHHHHHC--CCCceEEEEC
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-DAFNYNSEMSFDAALTKYF--PNGIDVYLDN 241 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~--~~~~d~vld~ 241 (356)
+.+++|+|++|++|..+++.+...|++|++++++.++.+... +.. ...|..+..++.+.+.+.. -+.+|++|.+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP---GVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC---CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 568999999999999999888888999999998766543221 222 1235555445555444432 2469999999
Q ss_pred Cch
Q 042784 242 VGG 244 (356)
Q Consensus 242 ~g~ 244 (356)
.|.
T Consensus 81 ag~ 83 (270)
T PRK06179 81 AGV 83 (270)
T ss_pred CCC
Confidence 883
No 256
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.09 E-value=0.001 Score=58.79 Aligned_cols=106 Identities=22% Similarity=0.256 Sum_probs=64.8
Q ss_pred hHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHH
Q 042784 151 AAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAAL 227 (356)
Q Consensus 151 ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i 227 (356)
.-+..+.+.+++++|++||-.|. |-|-.++.+++..|++|++++.|++..+.+++ +.|....+.... .++
T Consensus 49 ~k~~~~~~~~~l~~G~~vLDiGc--GwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~-~D~---- 121 (273)
T PF02353_consen 49 RKLDLLCEKLGLKPGDRVLDIGC--GWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRL-QDY---- 121 (273)
T ss_dssp HHHHHHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE-S-G----
T ss_pred HHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE-eec----
Confidence 33445566788999999999994 47888899999999999999999998888764 334321111110 111
Q ss_pred HHHCCCCceEEEE-----CCchh----hHHHHHHhcccCCEEEEEe
Q 042784 228 TKYFPNGIDVYLD-----NVGGK----MLEAVLNHVNVHARIILCG 264 (356)
Q Consensus 228 ~~~~~~~~d~vld-----~~g~~----~~~~~~~~l~~~G~~v~~g 264 (356)
+++. ..||.|+. .+|.+ .+..+.+.|+|+|+++.-.
T Consensus 122 ~~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~ 166 (273)
T PF02353_consen 122 RDLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT 166 (273)
T ss_dssp GG----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred cccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence 1222 26898864 34432 5788889999999987543
No 257
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.09 E-value=0.0041 Score=53.86 Aligned_cols=80 Identities=23% Similarity=0.334 Sum_probs=54.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC---ceeecCChhhHHHHHHHHC--CCCce
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD---DAFNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
+.+++|+|++|++|..++..+...|++|+++++++++.+.+.+++ +.. ...|..+..++.+.+++.. -+++|
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID 86 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence 578999999999999999888889999999998877655433222 321 1123344344444444432 24699
Q ss_pred EEEECCch
Q 042784 237 VYLDNVGG 244 (356)
Q Consensus 237 ~vld~~g~ 244 (356)
++|.+.|.
T Consensus 87 ~vi~~ag~ 94 (239)
T PRK07666 87 ILINNAGI 94 (239)
T ss_pred EEEEcCcc
Confidence 99998863
No 258
>PRK06720 hypothetical protein; Provisional
Probab=97.09 E-value=0.0054 Score=50.23 Aligned_cols=80 Identities=19% Similarity=0.312 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC-c--eeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD-D--AFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.+++|+|+++++|...+..+...|++|+++++++++.+.+.+++ +.. . ..|..+..++.+.+.+.. -+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999888888999999998876654432232 332 1 123333233333332211 2468
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|+++.+.|
T Consensus 95 DilVnnAG 102 (169)
T PRK06720 95 DMLFQNAG 102 (169)
T ss_pred CEEEECCC
Confidence 99998877
No 259
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.08 E-value=0.0043 Score=54.36 Aligned_cols=79 Identities=20% Similarity=0.225 Sum_probs=52.1
Q ss_pred CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCc----eeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAA--GGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD----AFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~--g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~----v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.|++++|+||+ +++|.++++.+...|++|+.++++++..+.++ ++.... ..|..+..+..+.+.++. -+.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ-KLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH-hhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 47899999998 79999999888889999999887744334444 332211 124444333333333322 1469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|+++.+.|
T Consensus 85 D~lv~nAg 92 (252)
T PRK06079 85 DGIVHAIA 92 (252)
T ss_pred CEEEEccc
Confidence 99999876
No 260
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.08 E-value=0.00095 Score=63.87 Aligned_cols=94 Identities=16% Similarity=0.167 Sum_probs=60.9
Q ss_pred hCCCCCCCEEE----EEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-ceeecCChhhHHHHHHHHCCC
Q 042784 159 LGQPKSGSNVF----VSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-DAFNYNSEMSFDAALTKYFPN 233 (356)
Q Consensus 159 ~~~~~~g~~Vl----V~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~~ 233 (356)
..++++|+++| |+||+|++|.+++++++..|++|+++..++.+....+ ..+.. .++|.+. -...+.+...
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~-~~~~~~l~~~--- 102 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATG-ITDPADLKAL--- 102 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCC-CCCHHHHHHH---
Confidence 46678999998 9999999999999999999999999875555333322 22333 3455443 1222222221
Q ss_pred CceEEEECCchhhHHHHHHhcccCCEEEEEeccc
Q 042784 234 GIDVYLDNVGGKMLEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 234 ~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 267 (356)
...+..+++.|.++|+++.++...
T Consensus 103 ----------~~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 103 ----------YEFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred ----------HHHHHHHHHhccCCCEEEEEcccc
Confidence 024455667777777777776543
No 261
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0041 Score=54.76 Aligned_cols=80 Identities=19% Similarity=0.302 Sum_probs=54.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC---ceeecCChhhHHHHHHHHC--CCCce
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD---DAFNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
+.++||+|++|++|..+++.+...|++|+++++++++.+.+.+.+ +.. ...|..+...+.+.+.+.. -+++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357999999999999999988899999999998877655443222 322 1224444344444444332 13699
Q ss_pred EEEECCch
Q 042784 237 VYLDNVGG 244 (356)
Q Consensus 237 ~vld~~g~ 244 (356)
+++.|.|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999874
No 262
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.08 E-value=0.0044 Score=53.61 Aligned_cols=79 Identities=13% Similarity=0.193 Sum_probs=53.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHH-HHHHHHhCCCc-eeecCChhhHHHHHHHHC--CCCceEEEE
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNV-KLLKEEFGYDD-AFNYNSEMSFDAALTKYF--PNGIDVYLD 240 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~-~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~--~~~~d~vld 240 (356)
+.++||+|++|++|..+++.+...|++|+++++++++. +.++ ..|... ..|..+..++.+.+.++. -+++|+++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 46899999999999999998888999999999776543 3333 445321 234444334444444332 146999999
Q ss_pred CCch
Q 042784 241 NVGG 244 (356)
Q Consensus 241 ~~g~ 244 (356)
+.|.
T Consensus 81 ~ag~ 84 (236)
T PRK06483 81 NASD 84 (236)
T ss_pred CCcc
Confidence 8873
No 263
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0044 Score=54.31 Aligned_cols=75 Identities=19% Similarity=0.318 Sum_probs=52.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---HhCCC---ceeecCChhhHHHHHHHHCCCCceEE
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKE---EFGYD---DAFNYNSEMSFDAALTKYFPNGIDVY 238 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~i~~~~~~~~d~v 238 (356)
+.++||+|++|++|..+++.+...|++|+++++++++.+.+++ ..+.. ...|..+... +.+....++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~----~~~~~~~~id~v 77 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAID----RAQAAEWDVDVL 77 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHH----HHHHhcCCCCEE
Confidence 4689999999999999999999999999999988776655542 22322 1124443222 233223479999
Q ss_pred EECCc
Q 042784 239 LDNVG 243 (356)
Q Consensus 239 ld~~g 243 (356)
|.+.|
T Consensus 78 i~~ag 82 (257)
T PRK09291 78 LNNAG 82 (257)
T ss_pred EECCC
Confidence 99987
No 264
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=97.07 E-value=0.077 Score=48.38 Aligned_cols=75 Identities=11% Similarity=0.096 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHhCCCc--e--eecCChhhHHHHHHHHCCCCceE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKG--CKVVGSTGSDDNVKLLKEEFGYDD--A--FNYNSEMSFDAALTKYFPNGIDV 237 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G--~~V~~~~~s~~~~~~~~~~~g~~~--v--~~~~~~~~~~~~i~~~~~~~~d~ 237 (356)
.|.+|||+||+|.+|...++.+...| .+|++.+++..+...+.+.+.... + .|..+...+.+.+ +++|+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~-----~~iD~ 77 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRAL-----RGVDY 77 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHH-----hcCCE
Confidence 36799999999999999888777665 589888876655443332332211 1 2444423333333 24899
Q ss_pred EEECCc
Q 042784 238 YLDNVG 243 (356)
Q Consensus 238 vld~~g 243 (356)
||.+.|
T Consensus 78 Vih~Ag 83 (324)
T TIGR03589 78 VVHAAA 83 (324)
T ss_pred EEECcc
Confidence 999876
No 265
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.06 E-value=0.0046 Score=54.31 Aligned_cols=81 Identities=21% Similarity=0.278 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH---hCCCce---eecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEE---FGYDDA---FNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~---~g~~~v---~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.++||+|++|++|..+++.+...|++|+++++++++.+.+.++ .+.... .|..+...+.+.+.+.. -+.+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999999999999888665444323 343311 24444333333333221 1468
Q ss_pred eEEEECCch
Q 042784 236 DVYLDNVGG 244 (356)
Q Consensus 236 d~vld~~g~ 244 (356)
|+++.|.|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999998873
No 266
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0069 Score=53.10 Aligned_cols=80 Identities=23% Similarity=0.308 Sum_probs=54.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCc----eeecCChhhHHHHHHHHC--CCCceEE
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDD----AFNYNSEMSFDAALTKYF--PNGIDVY 238 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~----v~~~~~~~~~~~~i~~~~--~~~~d~v 238 (356)
+.+++|+|++|++|...+..+...|++|++++++.++.+.+.+.+.... ..|..+..++...+.+.. -+++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4689999999999999998888889999999988877665553442211 234444333433333321 1469999
Q ss_pred EECCch
Q 042784 239 LDNVGG 244 (356)
Q Consensus 239 ld~~g~ 244 (356)
+.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999873
No 267
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=97.05 E-value=0.0046 Score=53.18 Aligned_cols=105 Identities=23% Similarity=0.253 Sum_probs=74.8
Q ss_pred hCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCce--eecCChhhHHHHHHHHCCCCc
Q 042784 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDA--FNYNSEMSFDAALTKYFPNGI 235 (356)
Q Consensus 159 ~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~~~~~ 235 (356)
.....+|++||=.+ +|+|-.+..+++..|. +|++++.|++.++.+++...-... +.+-. .+ ++.+. +....|
T Consensus 46 ~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~-~d-Ae~LP-f~D~sF 120 (238)
T COG2226 46 LLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVV-GD-AENLP-FPDNSF 120 (238)
T ss_pred hhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEE-ec-hhhCC-CCCCcc
Confidence 34556899998776 7889999999999987 999999999999888864432110 21111 11 11121 224579
Q ss_pred eEEEECCch-------hhHHHHHHhcccCCEEEEEecccc
Q 042784 236 DVYLDNVGG-------KMLEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 236 d~vld~~g~-------~~~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
|+|..+.|- ..+.+..|.|+|+|+++.+.....
T Consensus 121 D~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p 160 (238)
T COG2226 121 DAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKP 160 (238)
T ss_pred CEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCC
Confidence 999888774 278899999999999988776554
No 268
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.04 E-value=0.0051 Score=54.68 Aligned_cols=80 Identities=15% Similarity=0.199 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC-c--eeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD-D--AFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.+++|+|++|++|.++++.+...|++|+++++++++.+.+.+++ +.. . ..|..+..++...+.++. -+++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999998899999999998877655443332 322 1 123443333333333322 1469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|++|.+.|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999887
No 269
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.04 E-value=0.0049 Score=53.96 Aligned_cols=80 Identities=23% Similarity=0.412 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC-ce--eecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD-DA--FNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.++||+||+|++|.++++.+...|++|+.+++++++.+.+.+++ +.. .. .|..+..++.+.+.++. -+++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4789999999999999999888889999999998877655443232 221 11 23344333333333321 2469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|+++.+.|
T Consensus 88 d~vi~~ag 95 (254)
T PRK08085 88 DVLINNAG 95 (254)
T ss_pred CEEEECCC
Confidence 99999987
No 270
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.04 E-value=0.0057 Score=56.36 Aligned_cols=95 Identities=14% Similarity=0.143 Sum_probs=69.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHhC---C-CceeecCChhhHHHHHHHHCCCCceEEEE
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKG-CKVVGSTGSDDNVKLLKEEFG---Y-DDAFNYNSEMSFDAALTKYFPNGIDVYLD 240 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G-~~V~~~~~s~~~~~~~~~~~g---~-~~v~~~~~~~~~~~~i~~~~~~~~d~vld 240 (356)
.+|||.|+ |++|..+++.+.+.| .+|++.+++.++...+. ... . ...+|-.+.+.+.+.|++ +|+||+
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~-~~~~~~v~~~~vD~~d~~al~~li~~-----~d~VIn 74 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA-ELIGGKVEALQVDAADVDALVALIKD-----FDLVIN 74 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hhccccceeEEecccChHHHHHHHhc-----CCEEEE
Confidence 47999997 999999999999888 59999999999998887 443 1 234555543455555543 599999
Q ss_pred CCchhhHHHHH-HhcccCCEEEEEeccc
Q 042784 241 NVGGKMLEAVL-NHVNVHARIILCGMIS 267 (356)
Q Consensus 241 ~~g~~~~~~~~-~~l~~~G~~v~~g~~~ 267 (356)
|.....-..++ .|++.+-.++......
T Consensus 75 ~~p~~~~~~i~ka~i~~gv~yvDts~~~ 102 (389)
T COG1748 75 AAPPFVDLTILKACIKTGVDYVDTSYYE 102 (389)
T ss_pred eCCchhhHHHHHHHHHhCCCEEEcccCC
Confidence 99876444555 5666666777765543
No 271
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0059 Score=52.97 Aligned_cols=82 Identities=17% Similarity=0.269 Sum_probs=55.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC---ceeecCChhhHHHHHHHHC--CCC
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD---DAFNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~ 234 (356)
..+.+++|+|++|++|..++..+...|.+|+++++++++.+.+.+.+ +.. ...|..+..++...+.++. -+.
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 34678999999999999999999889999999998887665554222 221 1124444344434343322 136
Q ss_pred ceEEEECCch
Q 042784 235 IDVYLDNVGG 244 (356)
Q Consensus 235 ~d~vld~~g~ 244 (356)
+|+++.+.|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 9999999873
No 272
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.03 E-value=0.0061 Score=48.90 Aligned_cols=102 Identities=18% Similarity=0.177 Sum_probs=66.0
Q ss_pred HHHHHHHh-CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHH
Q 042784 152 AWVGIEVL-GQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKY 230 (356)
Q Consensus 152 a~~~l~~~-~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~ 230 (356)
.+.++.+. ...-.|++++|.|= |-+|.-+++.++.+|++|++++..+-+.-.+. .-|.. +. .+.+.+
T Consensus 9 ~~d~i~r~t~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~-v~------~~~~a~--- 76 (162)
T PF00670_consen 9 LVDGIMRATNLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFE-VM------TLEEAL--- 76 (162)
T ss_dssp HHHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-E-EE-------HHHHT---
T ss_pred HHHHHHhcCceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcE-ec------CHHHHH---
Confidence 34444433 33467999999995 99999999999999999999998887766665 44543 22 233333
Q ss_pred CCCCceEEEECCchhh--HHHHHHhcccCCEEEEEeccc
Q 042784 231 FPNGIDVYLDNVGGKM--LEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 231 ~~~~~d~vld~~g~~~--~~~~~~~l~~~G~~v~~g~~~ 267 (356)
...|+++.++|... -.+.++.|+++..+..+|...
T Consensus 77 --~~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d 113 (162)
T PF00670_consen 77 --RDADIFVTATGNKDVITGEHFRQMKDGAILANAGHFD 113 (162)
T ss_dssp --TT-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSSST
T ss_pred --hhCCEEEECCCCccccCHHHHHHhcCCeEEeccCcCc
Confidence 24799999999863 467888999988888777543
No 273
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.00 E-value=0.0065 Score=53.16 Aligned_cols=79 Identities=15% Similarity=0.259 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHhCCC---ceeecCChhhHHHHHHHHC--CCCce
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDN--VKLLKEEFGYD---DAFNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~--~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
.+++++|+|+++++|.++++.+...|++|+++++++.. .+.++ +.+.. ...|..+..++.+.+.+.. -+++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47899999999999999999988999999988765422 22333 44432 1234444344444444332 24699
Q ss_pred EEEECCc
Q 042784 237 VYLDNVG 243 (356)
Q Consensus 237 ~vld~~g 243 (356)
+++.+.|
T Consensus 86 ~lv~~ag 92 (251)
T PRK12481 86 ILINNAG 92 (251)
T ss_pred EEEECCC
Confidence 9999887
No 274
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.99 E-value=0.012 Score=53.29 Aligned_cols=100 Identities=18% Similarity=0.164 Sum_probs=69.7
Q ss_pred HhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHHHHHCC
Q 042784 158 VLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC--KVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAALTKYFP 232 (356)
Q Consensus 158 ~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~--~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~ 232 (356)
+...++++++||..|+ | .|..++.+++..+. +|++++.+++..+.+++ .+|.+.+.... .+..+.+.. .
T Consensus 74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~--gD~~~~~~~--~ 147 (322)
T PRK13943 74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC--GDGYYGVPE--F 147 (322)
T ss_pred HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe--CChhhcccc--c
Confidence 3456789999999995 5 69999999998864 79999999887766653 35654333222 233222211 1
Q ss_pred CCceEEEECCchh-hHHHHHHhcccCCEEEEE
Q 042784 233 NGIDVYLDNVGGK-MLEAVLNHVNVHARIILC 263 (356)
Q Consensus 233 ~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~ 263 (356)
+.+|+|+.+.+.. .....++.|+++|+++..
T Consensus 148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 4699999988764 445678899999998763
No 275
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.98 E-value=0.0075 Score=52.23 Aligned_cols=81 Identities=22% Similarity=0.343 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH---hCCCc-e--eecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEE---FGYDD-A--FNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
++.++||+|++|++|...++.+...|.+|+++++++++.+.+... .+... . .|..+...+...+.++. -+.+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 357899999999999999988888899999999888775544322 33321 1 34444334444333321 1358
Q ss_pred eEEEECCch
Q 042784 236 DVYLDNVGG 244 (356)
Q Consensus 236 d~vld~~g~ 244 (356)
|.++.+.|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999998864
No 276
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.98 E-value=0.008 Score=52.87 Aligned_cols=80 Identities=15% Similarity=0.172 Sum_probs=52.7
Q ss_pred CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCChHH---HHHHHHHhCCCce--eecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAAA--GGVGMFAGQLAKLKGCKVVGSTGSDDN---VKLLKEEFGYDDA--FNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~~--g~vG~~~i~la~~~G~~V~~~~~s~~~---~~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~--~~~ 234 (356)
.|++++|+|++ +++|.++++.+...|++|+.++++++. .+.+.++++.... .|..+..++.+.+.++. -+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 47899999997 499999998888899999998877543 2333334443222 24444334443333332 146
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|+++.+.|
T Consensus 89 ld~lv~nAg 97 (258)
T PRK07533 89 LDFLLHSIA 97 (258)
T ss_pred CCEEEEcCc
Confidence 999999876
No 277
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.97 E-value=0.005 Score=54.05 Aligned_cols=79 Identities=16% Similarity=0.216 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---HhCCC---ceeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKE---EFGYD---DAFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.++||+||+|++|.+.++.+...|++|++++++ ++.+.+.+ +.+.. ...|..+..++...+.+.. .+.+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999998899999998876 33333221 23332 1234444333333333332 2469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|+++.+.|
T Consensus 93 d~li~~ag 100 (258)
T PRK06935 93 DILVNNAG 100 (258)
T ss_pred CEEEECCC
Confidence 99999887
No 278
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.96 E-value=0.0075 Score=53.14 Aligned_cols=80 Identities=21% Similarity=0.250 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEeCChH---HHHHHHHHhCCCce--eecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAAAG--GVGMFAGQLAKLKGCKVVGSTGSDD---NVKLLKEEFGYDDA--FNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~~g--~vG~~~i~la~~~G~~V~~~~~s~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~--~~~ 234 (356)
.|++++|+|+++ ++|.++++.+...|++|+..+++++ ..+.+.++.|.... .|..+..+..+.+.++. -+.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999986 8999998888888999998887642 22333323353322 35555344444443332 246
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|+++.+.|
T Consensus 87 iDilVnnag 95 (260)
T PRK06603 87 FDFLLHGMA 95 (260)
T ss_pred ccEEEEccc
Confidence 999999876
No 279
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.96 E-value=0.0062 Score=54.08 Aligned_cols=81 Identities=17% Similarity=0.208 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCCh---HHHHHHHHHhCCCc--eeecCChhhHHHHHHHHC--CC
Q 042784 163 KSGSNVFVSAAA--GGVGMFAGQLAKLKGCKVVGSTGSD---DNVKLLKEEFGYDD--AFNYNSEMSFDAALTKYF--PN 233 (356)
Q Consensus 163 ~~g~~VlV~g~~--g~vG~~~i~la~~~G~~V~~~~~s~---~~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~--~~ 233 (356)
-.++++||+|++ +++|.++++.+...|++|+.+.+++ ++.+.+.++++... ..|..+..+..+.+.++. -+
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 357899999996 7999999998888999998887654 33444443555321 234444344444333332 24
Q ss_pred CceEEEECCc
Q 042784 234 GIDVYLDNVG 243 (356)
Q Consensus 234 ~~d~vld~~g 243 (356)
.+|+++.+.|
T Consensus 88 ~iD~lv~nAG 97 (272)
T PRK08159 88 KLDFVVHAIG 97 (272)
T ss_pred CCcEEEECCc
Confidence 6999999876
No 280
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.95 E-value=0.0049 Score=50.00 Aligned_cols=91 Identities=19% Similarity=0.293 Sum_probs=62.2
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC--CceeecCChhhHHHHHHHHCCCCceEEEECCch
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGY--DDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGG 244 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~--~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~ 244 (356)
+|.|+||+|-+|...++=|+.+|-.|+++++++++....+ ..-. ..++|. ..+.+.+ .|+|+||++.|.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~-~~~i~q~Difd~---~~~a~~l-----~g~DaVIsA~~~ 72 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ-GVTILQKDIFDL---TSLASDL-----AGHDAVISAFGA 72 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccc-cceeecccccCh---hhhHhhh-----cCCceEEEeccC
Confidence 5889999999999999999999999999999998886542 1111 123333 2222222 479999998875
Q ss_pred h----------hHHHHHHhcccCC--EEEEEecc
Q 042784 245 K----------MLEAVLNHVNVHA--RIILCGMI 266 (356)
Q Consensus 245 ~----------~~~~~~~~l~~~G--~~v~~g~~ 266 (356)
. ..+.....|+.-| ++..+|-.
T Consensus 73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 2 2334555666533 67777753
No 281
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.008 Score=52.87 Aligned_cols=80 Identities=21% Similarity=0.265 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH--HhCCC---ceeecCChhhHHHHHHHHC--CCCce
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKE--EFGYD---DAFNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~--~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
.+.+++|+|++|++|...++.+...|++|+.++++++..+.+++ +.+.. ...|..+..++.+.+.++. -+.+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999888899999999987654333321 22322 1234444333333333321 24699
Q ss_pred EEEECCc
Q 042784 237 VYLDNVG 243 (356)
Q Consensus 237 ~vld~~g 243 (356)
++|.+.|
T Consensus 85 ~vi~~ag 91 (263)
T PRK08226 85 ILVNNAG 91 (263)
T ss_pred EEEECCC
Confidence 9999887
No 282
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.022 Score=49.33 Aligned_cols=80 Identities=19% Similarity=0.165 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHH---HhCCC-ce--eecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDD-NVKLLKE---EFGYD-DA--FNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~-~~~~~~~---~~g~~-~v--~~~~~~~~~~~~i~~~~--~~~ 234 (356)
++.+++|+|++|++|...++.+...|++|+.+.++.. +.+.+.+ +.+.. .. .|..+..++.+.+.+.. -++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999998887765432 2222221 23321 11 23344333444333321 246
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|++|.+.|
T Consensus 84 id~vi~~ag 92 (245)
T PRK12937 84 IDVLVNNAG 92 (245)
T ss_pred CCEEEECCC
Confidence 999999887
No 283
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.93 E-value=0.0038 Score=50.72 Aligned_cols=79 Identities=19% Similarity=0.300 Sum_probs=51.2
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCC--hHHHHHHHHH---hCCC-ce--eecCChhhHHHHHHHHC--CCC
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGS--DDNVKLLKEE---FGYD-DA--FNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s--~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~i~~~~--~~~ 234 (356)
++++|+||++++|...++.+...|. +|+.+.++ .++.+.+.++ .+.. .+ .|..+..++.+.+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999998877777777 88888887 4544444223 3421 11 23344344444444433 357
Q ss_pred ceEEEECCch
Q 042784 235 IDVYLDNVGG 244 (356)
Q Consensus 235 ~d~vld~~g~ 244 (356)
+|++|.|.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999998873
No 284
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.92 E-value=0.0041 Score=50.89 Aligned_cols=97 Identities=23% Similarity=0.264 Sum_probs=65.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceee-c-----------------CC--hhhHH
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFN-Y-----------------NS--EMSFD 224 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~-~-----------------~~--~~~~~ 224 (356)
.-+|+|+|+ |.+|+.|+.+++.+|++|+..+...++.+... ..++..+.. + .. ...+.
T Consensus 20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLE-SLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH-HTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh-cccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 478999997 99999999999999999999999988888887 666643322 1 00 12344
Q ss_pred HHHHHHCCCCceEEEECC---ch--h--hHHHHHHhcccCCEEEEEecccc
Q 042784 225 AALTKYFPNGIDVYLDNV---GG--K--MLEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 225 ~~i~~~~~~~~d~vld~~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
+.+.. +|++|-+. +. + .-.+.++.|+++..++.+....+
T Consensus 98 ~~i~~-----~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~g 143 (168)
T PF01262_consen 98 EFIAP-----ADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQG 143 (168)
T ss_dssp HHHHH------SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT
T ss_pred HHHhh-----CcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCC
Confidence 44433 79988643 11 1 33566778898888888876544
No 285
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.92 E-value=0.0075 Score=52.84 Aligned_cols=81 Identities=21% Similarity=0.297 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH---hCCC---ceeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEE---FGYD---DAFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.+++|+|++|++|..++..+...|++|+.+++++++.+.+.++ .+.. ...|..+..++...+.+.. -+.+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 488999999999999999988888899999999887765544322 3321 1224444334444333332 1468
Q ss_pred eEEEECCch
Q 042784 236 DVYLDNVGG 244 (356)
Q Consensus 236 d~vld~~g~ 244 (356)
|.++.+.|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999998873
No 286
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.92 E-value=0.01 Score=51.51 Aligned_cols=80 Identities=25% Similarity=0.338 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-ce--eecCChhhHHHHHHHHC--CCCceEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-DA--FNYNSEMSFDAALTKYF--PNGIDVY 238 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~i~~~~--~~~~d~v 238 (356)
.+.+++|+|++|++|..+++.+...|++|+...++.++.+.+...++.. .. .|..+..++.+.+.+.. -+++|.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3679999999999999999888889999988887777766554355432 11 23333233333333321 1469999
Q ss_pred EECCc
Q 042784 239 LDNVG 243 (356)
Q Consensus 239 ld~~g 243 (356)
+.+.|
T Consensus 85 i~~ag 89 (245)
T PRK12936 85 VNNAG 89 (245)
T ss_pred EECCC
Confidence 99987
No 287
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.92 E-value=0.0079 Score=52.71 Aligned_cols=80 Identities=21% Similarity=0.268 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC-c--eeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD-D--AFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.+++|+|++|++|..++..+...|++|+.+++++++.+.+.+++ +.. . ..|..+..++.+.+.++. -+++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3789999999999999999988889999999998877665543222 322 1 234444333433333322 2469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|+++.+.|
T Consensus 90 d~li~~ag 97 (255)
T PRK06113 90 DILVNNAG 97 (255)
T ss_pred CEEEECCC
Confidence 99999887
No 288
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.91 E-value=0.0063 Score=53.40 Aligned_cols=80 Identities=18% Similarity=0.240 Sum_probs=52.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHH----HHHHHHhCC--CceeecCChhhHHHHHHHHC--CCC
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNV----KLLKEEFGY--DDAFNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~----~~~~~~~g~--~~v~~~~~~~~~~~~i~~~~--~~~ 234 (356)
-.|+.|||+||++|+|.+.++=...+|++++..+.+++.. +.++ +.|- ..+.|.++.+++.....+.. -|.
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~-~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~ 114 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIR-KIGEAKAYTCDISDREEIYRLAKKVKKEVGD 114 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHH-hcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 3689999999999999887777777788888887665433 3344 3341 12334444344444333332 136
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|++++++|
T Consensus 115 V~ILVNNAG 123 (300)
T KOG1201|consen 115 VDILVNNAG 123 (300)
T ss_pred ceEEEeccc
Confidence 999999988
No 289
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.0051 Score=53.97 Aligned_cols=80 Identities=18% Similarity=0.167 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH--HhCCC---ceeecCChhhHHHHHHHHC--CCCce
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKE--EFGYD---DAFNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~--~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
.+.++||+||+|++|..+++.+...|++|+++++++++.+..++ +.+.. ...|..+..++...+.++. -+++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 36899999999999999998888899999989888776544331 22322 1223444333443343332 24799
Q ss_pred EEEECCc
Q 042784 237 VYLDNVG 243 (356)
Q Consensus 237 ~vld~~g 243 (356)
++|.+.|
T Consensus 86 ~vi~~ag 92 (258)
T PRK08628 86 GLVNNAG 92 (258)
T ss_pred EEEECCc
Confidence 9999988
No 290
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.013 Score=51.12 Aligned_cols=105 Identities=18% Similarity=0.208 Sum_probs=63.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHh---CCC-ce--eecCChhh---HHHHHHH----
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGST-GSDDNVKLLKEEF---GYD-DA--FNYNSEMS---FDAALTK---- 229 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~-~s~~~~~~~~~~~---g~~-~v--~~~~~~~~---~~~~i~~---- 229 (356)
.+.+++|+|++|++|.++++.+...|++|++.. +++++.+.+..++ +.. .. .|..+..+ +.+.+.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 468999999999999999999999999988764 4444443332222 321 11 23332222 2222322
Q ss_pred HCC-CCceEEEECCchh-----------hH---------------HHHHHhcccCCEEEEEecccc
Q 042784 230 YFP-NGIDVYLDNVGGK-----------ML---------------EAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 230 ~~~-~~~d~vld~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~ 268 (356)
..+ +++|+++.+.|.. .+ +.++..++..|+++.++....
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 112 3799999988731 11 234455666789998877554
No 291
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.91 E-value=0.0052 Score=54.38 Aligned_cols=82 Identities=23% Similarity=0.401 Sum_probs=57.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC---CC------ceeecCChhhHHHHHH---HH
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFG---YD------DAFNYNSEMSFDAALT---KY 230 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g---~~------~v~~~~~~~~~~~~i~---~~ 230 (356)
-.|..++|+|++.++|.+++..+...|++|+.+.+++++.+..+.++. .. .+.|..+..+..+.+. +.
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 358899999999999999999999999999999999988766654322 11 2223333233332222 22
Q ss_pred CCCCceEEEECCch
Q 042784 231 FPNGIDVYLDNVGG 244 (356)
Q Consensus 231 ~~~~~d~vld~~g~ 244 (356)
..+++|+++++.|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 24579999998873
No 292
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.89 E-value=0.0077 Score=52.43 Aligned_cols=81 Identities=21% Similarity=0.237 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH---hCCC-ce--eecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEE---FGYD-DA--FNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.++||+||+|++|...+..+...|++|++++++.++.....+. .+.. .. .|..+..++.+.+.+.. -+.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 467999999999999999988888899999999886654433222 2221 11 23444333444333322 1368
Q ss_pred eEEEECCch
Q 042784 236 DVYLDNVGG 244 (356)
Q Consensus 236 d~vld~~g~ 244 (356)
|.++.+.|.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999998753
No 293
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.88 E-value=0.0085 Score=56.14 Aligned_cols=75 Identities=23% Similarity=0.341 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-ce--eecCChhhHHHHHHHHCCCCceEEEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-DA--FNYNSEMSFDAALTKYFPNGIDVYLD 240 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~i~~~~~~~~d~vld 240 (356)
.+++++|+||+|++|.+.++.+...|++|+++++++++.+...+..+.. .. .|..+..++ .+.. +++|++|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v----~~~l-~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAAL----AELL-EKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHH----HHHh-CCCCEEEE
Confidence 4789999999999999999888889999999998776654322111111 11 244432222 2222 36999999
Q ss_pred CCc
Q 042784 241 NVG 243 (356)
Q Consensus 241 ~~g 243 (356)
+.|
T Consensus 252 nAG 254 (406)
T PRK07424 252 NHG 254 (406)
T ss_pred CCC
Confidence 876
No 294
>PRK06398 aldose dehydrogenase; Validated
Probab=96.88 E-value=0.0015 Score=57.57 Aligned_cols=75 Identities=13% Similarity=0.162 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHC--CCCceEEEEC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYF--PNGIDVYLDN 241 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~--~~~~d~vld~ 241 (356)
.|.++||+|++|++|.+++..+...|++|+++++++.+...+. ....|..+..++.+.+.++. -+.+|+++.+
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVD-----YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceE-----EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 3689999999999999999999999999999987754322110 11234444344444444332 2469999998
Q ss_pred Cc
Q 042784 242 VG 243 (356)
Q Consensus 242 ~g 243 (356)
.|
T Consensus 80 Ag 81 (258)
T PRK06398 80 AG 81 (258)
T ss_pred CC
Confidence 87
No 295
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.87 E-value=0.0084 Score=52.69 Aligned_cols=80 Identities=13% Similarity=0.236 Sum_probs=53.0
Q ss_pred CCCEEEEEcC--CChHHHHHHHHHHHCCCEEEEEeCCh--HHHHHHHHHhCCC---ceeecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAA--AGGVGMFAGQLAKLKGCKVVGSTGSD--DNVKLLKEEFGYD---DAFNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~--~g~vG~~~i~la~~~G~~V~~~~~s~--~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~--~~~ 234 (356)
.+++++|+|+ ++++|.++++.+...|++|+.++++. +..+.+.++++.. ...|..+..++.+.+.++. -++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999998 79999999988888999999987553 3344444345432 1234444333443333322 246
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|+++.+.|
T Consensus 86 iD~li~nAG 94 (256)
T PRK07889 86 LDGVVHSIG 94 (256)
T ss_pred CcEEEEccc
Confidence 999999876
No 296
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.87 E-value=0.0084 Score=52.84 Aligned_cols=81 Identities=23% Similarity=0.321 Sum_probs=59.2
Q ss_pred CCCCEEEEEcCCChHHHHH-HHHHHHCCCEEEEEeCChHHHHHHHHH----hCC---CceeecCChhhHHHHHHH-HCCC
Q 042784 163 KSGSNVFVSAAAGGVGMFA-GQLAKLKGCKVVGSTGSDDNVKLLKEE----FGY---DDAFNYNSEMSFDAALTK-YFPN 233 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~-i~la~~~G~~V~~~~~s~~~~~~~~~~----~g~---~~v~~~~~~~~~~~~i~~-~~~~ 233 (356)
+-|++.+|+||+.++|.+- -+||+ .|.+|+.+.|+++|++.++++ .++ ..++|+.+....-+.+++ +.+-
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~ 125 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGL 125 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence 4579999999999999875 46666 999999999999998877654 332 245677763323444555 4455
Q ss_pred CceEEEECCch
Q 042784 234 GIDVYLDNVGG 244 (356)
Q Consensus 234 ~~d~vld~~g~ 244 (356)
.+-+.++|+|-
T Consensus 126 ~VgILVNNvG~ 136 (312)
T KOG1014|consen 126 DVGILVNNVGM 136 (312)
T ss_pred ceEEEEecccc
Confidence 78889999883
No 297
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.87 E-value=0.012 Score=51.52 Aligned_cols=79 Identities=19% Similarity=0.183 Sum_probs=52.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH----hCCC--cee--ecCChhhHHHHHHHHC--CCC
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEE----FGYD--DAF--NYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~----~g~~--~v~--~~~~~~~~~~~i~~~~--~~~ 234 (356)
++++||+|++|++|..++..+...|++|+.++++..+.+.+.++ .+.. ..+ |..+..++...+.++. -++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 56899999999999999988888899999999887665444322 2311 112 3343333333333322 146
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|+++.+.|
T Consensus 82 id~vv~~ag 90 (259)
T PRK12384 82 VDLLVYNAG 90 (259)
T ss_pred CCEEEECCC
Confidence 999999887
No 298
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0072 Score=54.08 Aligned_cols=82 Identities=21% Similarity=0.240 Sum_probs=53.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCh---------HHHHHHHHHh---CCCc---eeecCChhhHHHHH
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSD---------DNVKLLKEEF---GYDD---AFNYNSEMSFDAAL 227 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~---------~~~~~~~~~~---g~~~---v~~~~~~~~~~~~i 227 (356)
-.+.+++|+|+++++|.++++.+...|++|++++++. ++.+.+.+++ |... ..|..+..++.+.+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 3578999999999999999988888999998887654 4433332232 3321 12444433444444
Q ss_pred HHHC--CCCceEEEECCch
Q 042784 228 TKYF--PNGIDVYLDNVGG 244 (356)
Q Consensus 228 ~~~~--~~~~d~vld~~g~ 244 (356)
.++. -+.+|+++.+.|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 3332 2469999998873
No 299
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.86 E-value=0.024 Score=43.33 Aligned_cols=100 Identities=20% Similarity=0.247 Sum_probs=66.2
Q ss_pred hCCCCCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHHHHHCCCC
Q 042784 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLKG-CKVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAALTKYFPNG 234 (356)
Q Consensus 159 ~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G-~~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~~~ 234 (356)
...+.++++|+-.|. |. |..+..+++..+ .+|++++.++...+.+++ .++...+.-.. .+....+.. ..+.
T Consensus 14 ~~~~~~~~~vldlG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~ 88 (124)
T TIGR02469 14 KLRLRPGDVLWDIGA-GS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVE--GDAPEALED-SLPE 88 (124)
T ss_pred HcCCCCCCEEEEeCC-CC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEe--ccccccChh-hcCC
Confidence 445677889999995 44 999999999875 599999999888777653 33433221111 111111111 1246
Q ss_pred ceEEEECCch----hhHHHHHHhcccCCEEEEE
Q 042784 235 IDVYLDNVGG----KMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 235 ~d~vld~~g~----~~~~~~~~~l~~~G~~v~~ 263 (356)
+|+|+...+. ..++.+.+.|+++|.++..
T Consensus 89 ~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 89 PDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred CCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 9999976543 2688899999999998864
No 300
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.85 E-value=0.019 Score=47.06 Aligned_cols=100 Identities=20% Similarity=0.293 Sum_probs=68.7
Q ss_pred hCCCCCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHHHHHCCCC
Q 042784 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLKG-CKVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAALTKYFPNG 234 (356)
Q Consensus 159 ~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G-~~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~~~ 234 (356)
...+++|+.++=.|+ +.|..++++++..- .+|++++++++..+..++ .||.+.+.... .+..+.+.++. .
T Consensus 29 ~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~--g~Ap~~L~~~~--~ 102 (187)
T COG2242 29 KLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVE--GDAPEALPDLP--S 102 (187)
T ss_pred hhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEe--ccchHhhcCCC--C
Confidence 355899998877775 34667788884443 399999999888777653 67865333222 23333444332 5
Q ss_pred ceEEEECCch---hhHHHHHHhcccCCEEEEEe
Q 042784 235 IDVYLDNVGG---KMLEAVLNHVNVHARIILCG 264 (356)
Q Consensus 235 ~d~vld~~g~---~~~~~~~~~l~~~G~~v~~g 264 (356)
+|.+|---|. ..++.++..|+++|++|.-.
T Consensus 103 ~daiFIGGg~~i~~ile~~~~~l~~ggrlV~na 135 (187)
T COG2242 103 PDAIFIGGGGNIEEILEAAWERLKPGGRLVANA 135 (187)
T ss_pred CCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence 8999865554 37899999999999998543
No 301
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.014 Score=50.67 Aligned_cols=77 Identities=18% Similarity=0.208 Sum_probs=52.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC--ceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD--DAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
.+++|+|++|++|...+..+...|++|+++++++++.+.+.+..... ...|..+..++.+.+.++. ...|.++.+.|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~d~~i~~ag 80 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLP-FIPELWIFNAG 80 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcc-cCCCEEEEcCc
Confidence 57999999999999988888888999999999888877665222111 1235555455555554432 23577666654
No 302
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.83 E-value=0.011 Score=51.80 Aligned_cols=80 Identities=19% Similarity=0.196 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHhCCC-ceeecCChhhHHHHHHHHC--CCCceEEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGS-DDNVKLLKEEFGYD-DAFNYNSEMSFDAALTKYF--PNGIDVYL 239 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s-~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~--~~~~d~vl 239 (356)
.+.+++|+|++|++|.++++.+...|++|+++.++ ++..+.++ ..+.. ...|..+..++.+.+.++. -+++|++|
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 36899999999999999999888899998877644 33444444 32332 1234444344444444332 24699999
Q ss_pred ECCch
Q 042784 240 DNVGG 244 (356)
Q Consensus 240 d~~g~ 244 (356)
.|.|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06463 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 98863
No 303
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.83 E-value=0.0096 Score=52.50 Aligned_cols=81 Identities=17% Similarity=0.243 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCc---eeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYDD---AFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.+++|+|+++++|..++..+...|++|+++++++++.+.+.+.+ |... ..|..+..++.+.+.+.. -+.+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5689999999999999988888888999999998877665443232 4321 234444333333333322 1469
Q ss_pred eEEEECCch
Q 042784 236 DVYLDNVGG 244 (356)
Q Consensus 236 d~vld~~g~ 244 (356)
|+++.+.|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999998873
No 304
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.0092 Score=52.26 Aligned_cols=81 Identities=19% Similarity=0.173 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHH---hCCC-ce--eecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDD-NVKLLKEE---FGYD-DA--FNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~-~~~~~~~~---~g~~-~v--~~~~~~~~~~~~i~~~~--~~~ 234 (356)
.+.+++|+|++|++|.++++.+...|++|++++++++ ..+.+.++ .+.. .. .|..+..++.+.+.+.. -+.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999899999999987643 22222212 2322 11 24444344444444332 246
Q ss_pred ceEEEECCch
Q 042784 235 IDVYLDNVGG 244 (356)
Q Consensus 235 ~d~vld~~g~ 244 (356)
+|++|.+.|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 9999999873
No 305
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.82 E-value=0.0083 Score=52.76 Aligned_cols=80 Identities=14% Similarity=0.240 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHH----hCCC---ceeecCChhhHHHHHHHHC--CC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTG-SDDNVKLLKEE----FGYD---DAFNYNSEMSFDAALTKYF--PN 233 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~-s~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~i~~~~--~~ 233 (356)
.+++++|+||++++|.+++..+...|++|+.+.+ ++++.+.+.++ .+.. ...|..+..++.+.+.++. -+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999999999988899999988764 34443332212 2322 1224444344444443332 24
Q ss_pred CceEEEECCc
Q 042784 234 GIDVYLDNVG 243 (356)
Q Consensus 234 ~~d~vld~~g 243 (356)
.+|+++.+.|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 6999999875
No 306
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.82 E-value=0.011 Score=51.43 Aligned_cols=82 Identities=16% Similarity=0.209 Sum_probs=53.5
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCc--e--eecC--ChhhHHHHHHHHC-
Q 042784 162 PKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYDD--A--FNYN--SEMSFDAALTKYF- 231 (356)
Q Consensus 162 ~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~~--v--~~~~--~~~~~~~~i~~~~- 231 (356)
..++.+++|+|++|++|...++.+...|++|++++++.++.+.+.+++ +... + .|.. +..++.+.+..+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 457889999999999999999888888999999998877654443232 3211 1 2222 2123333222222
Q ss_pred -CCCceEEEECCc
Q 042784 232 -PNGIDVYLDNVG 243 (356)
Q Consensus 232 -~~~~d~vld~~g 243 (356)
.+.+|.+|.+.|
T Consensus 89 ~~~~id~vi~~Ag 101 (247)
T PRK08945 89 QFGRLDGVLHNAG 101 (247)
T ss_pred HhCCCCEEEECCc
Confidence 136999999876
No 307
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.023 Score=50.48 Aligned_cols=101 Identities=19% Similarity=0.202 Sum_probs=62.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC---ceeecCChhhHHHHHHHHC-CCCceE
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD---DAFNYNSEMSFDAALTKYF-PNGIDV 237 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~-~~~~d~ 237 (356)
+++++|+|+ |++|.+++..+. .|++|+.+++++++.+.+.+++ |.. ...|..+..++...+.++. -+++|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 357899997 899999888775 7999999998877665443333 322 1234444334444443321 246999
Q ss_pred EEECCchh----h---------------HHHHHHhcccCCEEEEEeccc
Q 042784 238 YLDNVGGK----M---------------LEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 238 vld~~g~~----~---------------~~~~~~~l~~~G~~v~~g~~~ 267 (356)
++.+.|.. . ++.+...++.+|+++.++...
T Consensus 80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 99998731 1 233344455667777666543
No 308
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.81 E-value=0.01 Score=49.31 Aligned_cols=105 Identities=14% Similarity=0.262 Sum_probs=74.4
Q ss_pred CCCEEEEEcC-CChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-ceeecCChh---hHHHHHHHHCCCCceEE
Q 042784 164 SGSNVFVSAA-AGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-DAFNYNSEM---SFDAALTKYFPNGIDVY 238 (356)
Q Consensus 164 ~g~~VlV~g~-~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~---~~~~~i~~~~~~~~d~v 238 (356)
....|||+|+ +||+|.+...-....|+.|+++.++-++...+..++|.. .-+|.++++ .+..++++.+.+..|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 3467899976 788999888878888999999999988877666577853 224444433 35556666667789999
Q ss_pred EECCchh-----------hH--------------HHHHH--hcccCCEEEEEecccc
Q 042784 239 LDNVGGK-----------ML--------------EAVLN--HVNVHARIILCGMISQ 268 (356)
Q Consensus 239 ld~~g~~-----------~~--------------~~~~~--~l~~~G~~v~~g~~~~ 268 (356)
++..|-+ .. .+++. +.+..|++|.+|...+
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~ 142 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG 142 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE
Confidence 9977731 11 22222 3588899999998665
No 309
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.01 Score=52.55 Aligned_cols=78 Identities=19% Similarity=0.172 Sum_probs=52.0
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH---hCCCc-e--eecCChhhHHHHHHHHC--CCCceEE
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEE---FGYDD-A--FNYNSEMSFDAALTKYF--PNGIDVY 238 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~i~~~~--~~~~d~v 238 (356)
+++|+|++|++|...+..+...|++|+.++++.++.+.+.+. .+... . .|..+..++.+.+.++. .+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 799999999999999988888899999999887765544322 23221 1 23333233333333322 2469999
Q ss_pred EECCch
Q 042784 239 LDNVGG 244 (356)
Q Consensus 239 ld~~g~ 244 (356)
|.+.|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999873
No 310
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.80 E-value=0.0088 Score=52.70 Aligned_cols=80 Identities=10% Similarity=0.196 Sum_probs=51.0
Q ss_pred CCCEEEEEcC--CChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH---HHhCCCc--eeecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAA--AGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLK---EEFGYDD--AFNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~--~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~---~~~g~~~--v~~~~~~~~~~~~i~~~~--~~~ 234 (356)
.+.+++|+|| ++++|.+.++.+...|++|+.+.+.+...+.++ +++|... ..|..+..+..+.+.+.. -++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4789999996 579999999888889999988765543333332 2334322 234444344444443332 246
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|+++.+.|
T Consensus 85 iD~lVnnAG 93 (261)
T PRK08690 85 LDGLVHSIG 93 (261)
T ss_pred CcEEEECCc
Confidence 999999876
No 311
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.80 E-value=0.0081 Score=52.44 Aligned_cols=80 Identities=19% Similarity=0.245 Sum_probs=54.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC---ceeecCChhhHHHHHHHHC--CCCce
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD---DAFNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
+.++||+|++|++|...+..+...|.+|+++++++++.+.+.+.+ +.. ...|..+..++...+.++. -+++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 358999999999999999888888999999998887766655332 221 1124444344444333322 24589
Q ss_pred EEEECCch
Q 042784 237 VYLDNVGG 244 (356)
Q Consensus 237 ~vld~~g~ 244 (356)
++|.+.|.
T Consensus 81 ~vi~~a~~ 88 (255)
T TIGR01963 81 ILVNNAGI 88 (255)
T ss_pred EEEECCCC
Confidence 99988763
No 312
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.79 E-value=0.016 Score=47.24 Aligned_cols=97 Identities=16% Similarity=0.112 Sum_probs=65.4
Q ss_pred cccCchhhhHHHHHHHhCCCCCCCEEEEEcCCCh-HHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChh
Q 042784 143 SSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGG-VGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEM 221 (356)
Q Consensus 143 a~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~-vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 221 (356)
.-.|+...++...+.....--.|.+|+|.|+ |. +|..++..++..|++|+++.++.+
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~--------------------- 79 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTK--------------------- 79 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCch---------------------
Confidence 4556666666666665544457899999998 65 699899999999999888875421
Q ss_pred hHHHHHHHHCCCCceEEEECCchhhHHHHHHhcccCCEEEEEeccc
Q 042784 222 SFDAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 222 ~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 267 (356)
++.+.+. .+|+||-+++.+.+ -....++++-.++.++.+.
T Consensus 80 ~l~~~l~-----~aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr 119 (168)
T cd01080 80 NLKEHTK-----QADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred hHHHHHh-----hCCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence 2223333 38999999988642 2223466666666776643
No 313
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.0084 Score=52.43 Aligned_cols=75 Identities=20% Similarity=0.232 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC---ceeecCChhhHHHHHHHHC--CCCceEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD---DAFNYNSEMSFDAALTKYF--PNGIDVY 238 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d~v 238 (356)
.+++++|+|++|++|..+++.+...|++|+++++++++ . ..+.. ...|..+..++.+.+.++. -+.+|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----T-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----h-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 47899999999999999999888899999999987654 1 22221 1234444334444443332 2468999
Q ss_pred EECCc
Q 042784 239 LDNVG 243 (356)
Q Consensus 239 ld~~g 243 (356)
|.+.|
T Consensus 80 i~~ag 84 (252)
T PRK07856 80 VNNAG 84 (252)
T ss_pred EECCC
Confidence 99887
No 314
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.79 E-value=0.011 Score=51.41 Aligned_cols=80 Identities=20% Similarity=0.254 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH---hCCC-ce--eecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEE---FGYD-DA--FNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
++.++||+|++|++|..+++.+...|++|+.++++.++.+.+.+. .+.. .+ .|..+...+.+.+.++. -+++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 368999999999999999998888999999999887766554422 2221 12 23334333433333322 1468
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|++|.+.|
T Consensus 82 d~vi~~ag 89 (250)
T TIGR03206 82 DVLVNNAG 89 (250)
T ss_pred CEEEECCC
Confidence 99999987
No 315
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.79 E-value=0.0083 Score=52.91 Aligned_cols=85 Identities=18% Similarity=0.230 Sum_probs=62.1
Q ss_pred CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceee---cC-----ChhhHHHHHHHHC
Q 042784 160 GQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFN---YN-----SEMSFDAALTKYF 231 (356)
Q Consensus 160 ~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~---~~-----~~~~~~~~i~~~~ 231 (356)
.+.++.-+++|+|++.++|++.+.-++..|+.|..+.++.+++..+++.++....+. |. +-...+..++++-
T Consensus 28 ~~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~ 107 (331)
T KOG1210|consen 28 VKPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELR 107 (331)
T ss_pred cccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhh
Confidence 344666899999999999999999999999999999999999998887766422111 11 1123334444432
Q ss_pred --CCCceEEEECCch
Q 042784 232 --PNGIDVYLDNVGG 244 (356)
Q Consensus 232 --~~~~d~vld~~g~ 244 (356)
.+.+|.+|.|.|.
T Consensus 108 ~~~~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 108 DLEGPIDNLFCCAGV 122 (331)
T ss_pred hccCCcceEEEecCc
Confidence 2469999999984
No 316
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.015 Score=51.53 Aligned_cols=80 Identities=16% Similarity=0.182 Sum_probs=53.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---HhCCCc-e--eecCChhhHHHHHHHHC--CCCce
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKE---EFGYDD-A--FNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~---~~g~~~-v--~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
..+++|+||+|++|...++.+...|++|++++++.++.+.+.+ ..+... . .|..+..++.+.+.+.. -+++|
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 89 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE 89 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999998888889999999887766544332 223321 1 24444344444333321 14689
Q ss_pred EEEECCch
Q 042784 237 VYLDNVGG 244 (356)
Q Consensus 237 ~vld~~g~ 244 (356)
++|.+.|.
T Consensus 90 ~vi~~Ag~ 97 (274)
T PRK07775 90 VLVSGAGD 97 (274)
T ss_pred EEEECCCc
Confidence 99998874
No 317
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.78 E-value=0.011 Score=52.56 Aligned_cols=110 Identities=14% Similarity=0.127 Sum_probs=68.8
Q ss_pred hhhhHHHHHHHh-CCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeecCChhhHHH
Q 042784 148 PGFAAWVGIEVL-GQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDA 225 (356)
Q Consensus 148 ~~~ta~~~l~~~-~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~ 225 (356)
.+.....++.+. ..-..+.+++|+|+ |++|.+++..+...|+ +|+++.++.++.+.+.+.++....+... .+..+
T Consensus 105 D~~G~~~~l~~~~~~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~--~~~~~ 181 (278)
T PRK00258 105 DGIGFVRALEERLGVDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD--LELQE 181 (278)
T ss_pred cHHHHHHHHHhccCCCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec--ccchh
Confidence 333444455431 22245789999997 9999999999999995 9999999998887776555432101110 11111
Q ss_pred HHHHHCCCCceEEEECCchhhH------HHHHHhcccCCEEEEEec
Q 042784 226 ALTKYFPNGIDVYLDNVGGKML------EAVLNHVNVHARIILCGM 265 (356)
Q Consensus 226 ~i~~~~~~~~d~vld~~g~~~~------~~~~~~l~~~G~~v~~g~ 265 (356)
.+ ..+|+|++|+..... ......+++...++.+-.
T Consensus 182 ~~-----~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY 222 (278)
T PRK00258 182 EL-----ADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIY 222 (278)
T ss_pred cc-----ccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeec
Confidence 11 358999999864321 112356677777776644
No 318
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.78 E-value=0.02 Score=50.80 Aligned_cols=108 Identities=14% Similarity=0.124 Sum_probs=66.4
Q ss_pred hHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHH
Q 042784 151 AAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKY 230 (356)
Q Consensus 151 ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~ 230 (356)
....++.+......+.+++|.|+ |++|.+++..+...|++|++..+++++.+.+.+.++........ .+.+ .
T Consensus 103 G~~~~l~~~~~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~---~~~~----~ 174 (270)
T TIGR00507 103 GLVSDLERLIPLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF---SMDE----L 174 (270)
T ss_pred HHHHHHHhcCCCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe---chhh----h
Confidence 33344443233355789999997 99999999888888999999999888776665454321101111 1111 1
Q ss_pred CCCCceEEEECCchhh---H---HHHHHhcccCCEEEEEecc
Q 042784 231 FPNGIDVYLDNVGGKM---L---EAVLNHVNVHARIILCGMI 266 (356)
Q Consensus 231 ~~~~~d~vld~~g~~~---~---~~~~~~l~~~G~~v~~g~~ 266 (356)
.-..+|+||+|++... . ......++++..++.+...
T Consensus 175 ~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~ 216 (270)
T TIGR00507 175 PLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYN 216 (270)
T ss_pred cccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccC
Confidence 1135899999987531 1 1123456777777777553
No 319
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.0089 Score=54.04 Aligned_cols=80 Identities=16% Similarity=0.178 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCh----------HHHHHHHH---HhCCC---ceeecCChhhHHHHH
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSD----------DNVKLLKE---EFGYD---DAFNYNSEMSFDAAL 227 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~----------~~~~~~~~---~~g~~---~v~~~~~~~~~~~~i 227 (356)
.|.+++|+|+++++|.++++.+...|++|++++++. ++.+.+.+ ..|.. ...|..+..++.+.+
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 478999999999999999999988999999988762 23322221 33432 123444434444444
Q ss_pred HHHC--CCCceEEEECC-c
Q 042784 228 TKYF--PNGIDVYLDNV-G 243 (356)
Q Consensus 228 ~~~~--~~~~d~vld~~-g 243 (356)
.++. -+.+|+++.+. |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 3332 14699999988 5
No 320
>PRK04148 hypothetical protein; Provisional
Probab=96.77 E-value=0.01 Score=46.05 Aligned_cols=83 Identities=10% Similarity=0.086 Sum_probs=53.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECC
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNV 242 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~ 242 (356)
..+.++++.|. | .|...+..+...|.+|++++.+++..+.++ +.+...+.+.--..++. +. +++|+++.+-
T Consensus 15 ~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-~~~~~~v~dDlf~p~~~--~y----~~a~liysir 85 (134)
T PRK04148 15 GKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-KLGLNAFVDDLFNPNLE--IY----KNAKLIYSIR 85 (134)
T ss_pred ccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhCCeEEECcCCCCCHH--HH----hcCCEEEEeC
Confidence 45688999996 7 887666666688999999999999999888 66765333211001110 11 3577887776
Q ss_pred chh-hHHHHHHhc
Q 042784 243 GGK-MLEAVLNHV 254 (356)
Q Consensus 243 g~~-~~~~~~~~l 254 (356)
... .....++..
T Consensus 86 pp~el~~~~~~la 98 (134)
T PRK04148 86 PPRDLQPFILELA 98 (134)
T ss_pred CCHHHHHHHHHHH
Confidence 554 333333433
No 321
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.77 E-value=0.013 Score=51.68 Aligned_cols=80 Identities=19% Similarity=0.284 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEeCChH---HHHHHHHHhCCCce--eecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAAAG--GVGMFAGQLAKLKGCKVVGSTGSDD---NVKLLKEEFGYDDA--FNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~~g--~vG~~~i~la~~~G~~V~~~~~s~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~--~~~ 234 (356)
.|.+++|+||++ ++|.++++.+...|++|+..+++++ ..+.+..+.+.... .|..+..++.+.+.+.. -+.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 478999999975 8999998888889999998876632 22333322332212 34444344444444332 246
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|+++++.|
T Consensus 85 iD~linnAg 93 (262)
T PRK07984 85 FDGFVHSIG 93 (262)
T ss_pred CCEEEECCc
Confidence 999999987
No 322
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.73 E-value=0.021 Score=49.81 Aligned_cols=79 Identities=22% Similarity=0.282 Sum_probs=51.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHhCCC-ce--eecCChhhHHHHHHH---HCCCCceE
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTG-SDDNVKLLKEEFGYD-DA--FNYNSEMSFDAALTK---YFPNGIDV 237 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~-s~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~i~~---~~~~~~d~ 237 (356)
+.+++|+|++|++|..++..+...|++|+.+.+ ++++.+.+..+++.. .+ .|..+..++.+.+.+ ..+.++|+
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~ 84 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT 84 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence 578999999999999999988889999887654 455555554345432 11 244443333333333 33335999
Q ss_pred EEECCc
Q 042784 238 YLDNVG 243 (356)
Q Consensus 238 vld~~g 243 (356)
++.+.|
T Consensus 85 li~~ag 90 (253)
T PRK08642 85 VVNNAL 90 (253)
T ss_pred EEECCC
Confidence 999875
No 323
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.72 E-value=0.02 Score=50.73 Aligned_cols=96 Identities=19% Similarity=0.101 Sum_probs=68.3
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhH
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 223 (356)
-+||+....+..+....---.|.+|+|.|.+.-+|..+..++...|++|++..+.. .++
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t---------------------~~l 195 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS---------------------KDM 195 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc---------------------hhH
Confidence 45666556666665433234699999999966699999999999999998876321 223
Q ss_pred HHHHHHHCCCCceEEEECCchhh-HHHHHHhcccCCEEEEEeccc
Q 042784 224 DAALTKYFPNGIDVYLDNVGGKM-LEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 224 ~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~ 267 (356)
.+.++ .+|+||-++|.+. +.. +.++++..++.+|...
T Consensus 196 ~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 196 ASYLK-----DADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred HHHHh-----hCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 33343 3899999999873 333 4688988888888754
No 324
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.71 E-value=0.011 Score=51.61 Aligned_cols=80 Identities=18% Similarity=0.223 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHH---HhCCC-ce--eecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGS-TGSDDNVKLLKE---EFGYD-DA--FNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~-~~s~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~i~~~~--~~~ 234 (356)
++.+++|+||+|++|..++..+...|++|++. .++.++.+.+.+ +.+.. .. .|..+..++...+.+.. -++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46799999999999999999998899987764 555555433322 23332 11 24444344444343332 146
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|++|.+.|
T Consensus 83 id~vi~~ag 91 (250)
T PRK08063 83 LDVFVNNAA 91 (250)
T ss_pred CCEEEECCC
Confidence 999999887
No 325
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.019 Score=50.42 Aligned_cols=80 Identities=18% Similarity=0.170 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHh---CCC---ceeecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGS-DDNVKLLKEEF---GYD---DAFNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s-~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~ 234 (356)
.+.++||+|++|++|..+++.+...|++|+++++. .++.+.+.+++ +.. ...|..+..++.+.+.+.. -++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999999998888899988877653 34443332222 332 1224444344444443322 246
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|++|.+.|
T Consensus 88 iD~vi~~ag 96 (258)
T PRK09134 88 ITLLVNNAS 96 (258)
T ss_pred CCEEEECCc
Confidence 999999987
No 326
>PLN02476 O-methyltransferase
Probab=96.69 E-value=0.031 Score=49.39 Aligned_cols=102 Identities=15% Similarity=0.091 Sum_probs=70.9
Q ss_pred hCCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHHHHHC--
Q 042784 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLKG--CKVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAALTKYF-- 231 (356)
Q Consensus 159 ~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G--~~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~-- 231 (356)
..+....++||=.| +++|..++.+|+.++ .+|+.++.+++..+.+++ +.|..+.+.... .+..+.+.++.
T Consensus 113 L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~-GdA~e~L~~l~~~ 189 (278)
T PLN02476 113 LVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH-GLAAESLKSMIQN 189 (278)
T ss_pred HHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE-cCHHHHHHHHHhc
Confidence 45567789999998 678888889998774 389999999988777764 346543343332 34444454431
Q ss_pred --CCCceEEEECCch----hhHHHHHHhcccCCEEEEE
Q 042784 232 --PNGIDVYLDNVGG----KMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 232 --~~~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~ 263 (356)
.+.||.||--... ..++.+++.|+++|.++.=
T Consensus 190 ~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D 227 (278)
T PLN02476 190 GEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD 227 (278)
T ss_pred ccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 2479998744433 3688899999999998753
No 327
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.69 E-value=0.01 Score=59.69 Aligned_cols=81 Identities=22% Similarity=0.336 Sum_probs=56.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCCc----eeecCChhhHHHHHHHHC--CC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF----GYDD----AFNYNSEMSFDAALTKYF--PN 233 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~i~~~~--~~ 233 (356)
.++++||+|++|++|.++++.+...|++|++++++.++.+.+.+.+ +... ..|..+..++.+.+.+.. -+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999999999988889999999998877665544332 3211 234444344444444332 24
Q ss_pred CceEEEECCch
Q 042784 234 GIDVYLDNVGG 244 (356)
Q Consensus 234 ~~d~vld~~g~ 244 (356)
++|+++.+.|.
T Consensus 493 ~iDilV~nAG~ 503 (676)
T TIGR02632 493 GVDIVVNNAGI 503 (676)
T ss_pred CCcEEEECCCC
Confidence 79999999873
No 328
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.69 E-value=0.011 Score=51.98 Aligned_cols=80 Identities=18% Similarity=0.297 Sum_probs=52.0
Q ss_pred CCCEEEEEcC--CChHHHHHHHHHHHCCCEEEEEeCC---hHHHHHHHHHhCCCc--eeecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAA--AGGVGMFAGQLAKLKGCKVVGSTGS---DDNVKLLKEEFGYDD--AFNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~--~g~vG~~~i~la~~~G~~V~~~~~s---~~~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~--~~~ 234 (356)
.+++++|+|| ++++|.++++.+...|++|+.+.+. +++.+.+.++++... ..|..+..++.+.+.++. -+.
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 4789999996 5799999998888899999887543 334443433455322 234444344444444432 257
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|+++.+.|
T Consensus 85 iD~lvnnAG 93 (260)
T PRK06997 85 LDGLVHSIG 93 (260)
T ss_pred CcEEEEccc
Confidence 999999876
No 329
>PRK12743 oxidoreductase; Provisional
Probab=96.69 E-value=0.017 Score=50.68 Aligned_cols=79 Identities=22% Similarity=0.279 Sum_probs=50.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHH---HhCCC-ce--eecCChhhHHHHHHHHC--CCCc
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTG-SDDNVKLLKE---EFGYD-DA--FNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~-s~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
+++++|+|++|++|..+++.+...|++|+.+.+ +.++.+.+.+ ..|.. .. .|..+..++...+.++. -+.+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 568999999999999999999999999988754 3343333321 33432 12 34444333333333321 1469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|++|.+.|
T Consensus 82 d~li~~ag 89 (256)
T PRK12743 82 DVLVNNAG 89 (256)
T ss_pred CEEEECCC
Confidence 99999887
No 330
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.69 E-value=0.014 Score=50.97 Aligned_cols=79 Identities=19% Similarity=0.220 Sum_probs=52.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC-c--eeecCChhhHHHHHHHHC--CCCceE
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD-D--AFNYNSEMSFDAALTKYF--PNGIDV 237 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d~ 237 (356)
.+++|+|++|++|...++.+...|++|+.+.+++++.+.+.+++ +.. . ..|..+..++.+.+.++. .+.+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 37999999999999999888899999999998876654443222 321 1 124444333433333332 136899
Q ss_pred EEECCch
Q 042784 238 YLDNVGG 244 (356)
Q Consensus 238 vld~~g~ 244 (356)
+|.+.|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9998873
No 331
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.68 E-value=0.0074 Score=51.10 Aligned_cols=100 Identities=19% Similarity=0.201 Sum_probs=64.2
Q ss_pred HHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHH---HhCCCce-eecCChhhHHHHHHHH
Q 042784 157 EVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC--KVVGSTGSDDNVKLLKE---EFGYDDA-FNYNSEMSFDAALTKY 230 (356)
Q Consensus 157 ~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~--~V~~~~~s~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~i~~~ 230 (356)
.+..++++|++||-.| +|.|+.+.-+++..|. +|+.++..++-.+.+++ .+|...+ +...+ ...-..+
T Consensus 65 l~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd---g~~g~~~- 138 (209)
T PF01135_consen 65 LEALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD---GSEGWPE- 138 (209)
T ss_dssp HHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES----GGGTTGG-
T ss_pred HHHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc---hhhcccc-
Confidence 3467799999999999 6778889999988875 79999977765544443 4455422 22211 1111111
Q ss_pred CCCCceEEEECCchh-hHHHHHHhcccCCEEEEE
Q 042784 231 FPNGIDVYLDNVGGK-MLEAVLNHVNVHARIILC 263 (356)
Q Consensus 231 ~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~ 263 (356)
...||.++-+.+-+ .-...++.|+++|++|..
T Consensus 139 -~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 139 -EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp -G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred -CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 24699999888765 445677899999999863
No 332
>PRK09135 pteridine reductase; Provisional
Probab=96.68 E-value=0.015 Score=50.50 Aligned_cols=80 Identities=11% Similarity=0.106 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHh----CCC---ceeecCChhhHHHHHHHHC--CC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGS-DDNVKLLKEEF----GYD---DAFNYNSEMSFDAALTKYF--PN 233 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s-~~~~~~~~~~~----g~~---~v~~~~~~~~~~~~i~~~~--~~ 233 (356)
.+.++||+|++|++|..+++.+...|++|++++++ +++.+.+...+ +.. ...|..+...+...+.+.. -+
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45789999999999999998888889999999875 33333332121 111 1224444333433333321 24
Q ss_pred CceEEEECCc
Q 042784 234 GIDVYLDNVG 243 (356)
Q Consensus 234 ~~d~vld~~g 243 (356)
++|+||.+.|
T Consensus 85 ~~d~vi~~ag 94 (249)
T PRK09135 85 RLDALVNNAS 94 (249)
T ss_pred CCCEEEECCC
Confidence 6899999987
No 333
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.68 E-value=0.015 Score=50.95 Aligned_cols=79 Identities=19% Similarity=0.275 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChH--HHHHHHHHhCCC-c--eeecCChhhHHHHHHHHC--CCCce
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDD--NVKLLKEEFGYD-D--AFNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~--~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
.|.+++|+|++|++|.++++.+...|++|+.++++.. ..+.++ +.+.. . ..|..+..++.+.+.+.. .+.+|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3789999999999999999999889999988765432 223333 33422 1 123333333333333322 24699
Q ss_pred EEEECCc
Q 042784 237 VYLDNVG 243 (356)
Q Consensus 237 ~vld~~g 243 (356)
+++.+.|
T Consensus 88 ~li~~Ag 94 (253)
T PRK08993 88 ILVNNAG 94 (253)
T ss_pred EEEECCC
Confidence 9999887
No 334
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=96.68 E-value=0.013 Score=50.67 Aligned_cols=78 Identities=27% Similarity=0.353 Sum_probs=49.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHh---CCC---ceeecCChhhHHHHHHHHC--CCCce
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTG-SDDNVKLLKEEF---GYD---DAFNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~-s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
+++||+|++|++|...++.+...|++|+++.+ ++++.+...+++ +.. ...|..+..++.+.+.++. .+.+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 47899999999999999999889999988886 444433322122 211 1224444333433333322 24699
Q ss_pred EEEECCc
Q 042784 237 VYLDNVG 243 (356)
Q Consensus 237 ~vld~~g 243 (356)
+||.+.|
T Consensus 81 ~vi~~ag 87 (242)
T TIGR01829 81 VLVNNAG 87 (242)
T ss_pred EEEECCC
Confidence 9999987
No 335
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.67 E-value=0.035 Score=47.07 Aligned_cols=106 Identities=15% Similarity=0.169 Sum_probs=75.5
Q ss_pred HhCCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHHHHHCC
Q 042784 158 VLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKG--CKVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAALTKYFP 232 (356)
Q Consensus 158 ~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G--~~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~ 232 (356)
..++.....+||=.| +.+|..++.+|..+. .+++.++.++++.+.+++ +.|....+......+..+.+.+...
T Consensus 53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~ 130 (219)
T COG4122 53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLD 130 (219)
T ss_pred HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccC
Confidence 345667888999998 788999999999886 389999999998888775 3455543222110245555555334
Q ss_pred CCceEEE-ECCch---hhHHHHHHhcccCCEEEEEec
Q 042784 233 NGIDVYL-DNVGG---KMLEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 233 ~~~d~vl-d~~g~---~~~~~~~~~l~~~G~~v~~g~ 265 (356)
+.||.|| |+--. ..++.+++.|+++|.++.=..
T Consensus 131 ~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DNv 167 (219)
T COG4122 131 GSFDLVFIDADKADYPEYLERALPLLRPGGLIVADNV 167 (219)
T ss_pred CCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEeec
Confidence 6799997 55443 388999999999998885443
No 336
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.67 E-value=0.01 Score=51.99 Aligned_cols=101 Identities=18% Similarity=0.137 Sum_probs=61.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-CCC-ceeecCChhhHHHHHHHHCCCCceEEEEC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF-GYD-DAFNYNSEMSFDAALTKYFPNGIDVYLDN 241 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~-g~~-~v~~~~~~~~~~~~i~~~~~~~~d~vld~ 241 (356)
.+.+|||+||+|.+|..+++.+...|.+|+++.+++++........ +.. ...|..+. .+.+.+..+.++|+||.+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~l~~~~~~~~d~vi~~ 92 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG---SDKLVEAIGDDSDAVICA 92 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC---HHHHHHHhhcCCCEEEEC
Confidence 3679999999999999999888888999999998877654332111 121 11244321 112222222369999998
Q ss_pred Cchh--------------hHHHHHHhcccC--CEEEEEeccc
Q 042784 242 VGGK--------------MLEAVLNHVNVH--ARIILCGMIS 267 (356)
Q Consensus 242 ~g~~--------------~~~~~~~~l~~~--G~~v~~g~~~ 267 (356)
.|.. ....+++.++.. ++++.++...
T Consensus 93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~ 134 (251)
T PLN00141 93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL 134 (251)
T ss_pred CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence 7641 123344444332 6788876643
No 337
>PRK07069 short chain dehydrogenase; Validated
Probab=96.67 E-value=0.013 Score=50.98 Aligned_cols=77 Identities=22% Similarity=0.333 Sum_probs=51.8
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHhC----CCc----eeecCChhhHHHHHHHHC--CCCc
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGS-DDNVKLLKEEFG----YDD----AFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s-~~~~~~~~~~~g----~~~----v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
+++|+|++|++|...++.+...|++|++++++ .++.+.+.+.+. ... ..|..+..++.+.+.+.. -+++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 38999999999999998888889999999977 555544432332 211 225555444444444332 2469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|+++.+.|
T Consensus 81 d~vi~~ag 88 (251)
T PRK07069 81 SVLVNNAG 88 (251)
T ss_pred cEEEECCC
Confidence 99999987
No 338
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.66 E-value=0.027 Score=48.38 Aligned_cols=102 Identities=19% Similarity=0.242 Sum_probs=73.8
Q ss_pred HhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHH---hCCCceeecCChhhHHHHHHHHCC
Q 042784 158 VLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC--KVVGSTGSDDNVKLLKEE---FGYDDAFNYNSEMSFDAALTKYFP 232 (356)
Q Consensus 158 ~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~--~V~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~ 232 (356)
...++.+|++|+=.| .|.|.+++.||+..|. +|+.....++..+.+++. +|....+.... .|..+.+. +
T Consensus 88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~-~Dv~~~~~---~ 161 (256)
T COG2519 88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL-GDVREGID---E 161 (256)
T ss_pred HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe-cccccccc---c
Confidence 357899999998877 5679999999998876 999999999988887653 34433232222 23322221 2
Q ss_pred CCceEEEECCchh--hHHHHHHhcccCCEEEEEec
Q 042784 233 NGIDVYLDNVGGK--MLEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 233 ~~~d~vld~~g~~--~~~~~~~~l~~~G~~v~~g~ 265 (356)
..+|.++==...+ .++.+.+.|+++|.++.+..
T Consensus 162 ~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P 196 (256)
T COG2519 162 EDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP 196 (256)
T ss_pred cccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence 3689887656554 88999999999999988744
No 339
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.66 E-value=0.052 Score=47.26 Aligned_cols=103 Identities=15% Similarity=0.175 Sum_probs=63.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-hHHH----HHHHHHhCCC-ce--eecCChhhHHHHHHHHC--CCC
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGS-DDNV----KLLKEEFGYD-DA--FNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s-~~~~----~~~~~~~g~~-~v--~~~~~~~~~~~~i~~~~--~~~ 234 (356)
+.++||+|++|++|...++-+...|++|+.+.++ .++. ..++ +.+.. .. .|..+..++...+.++. -++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK-ENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-HcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 6799999999999999998888899988776643 2222 2222 33332 11 24444333333333322 146
Q ss_pred ceEEEECCchh--------------------------hHHHHHHhcccCCEEEEEecccc
Q 042784 235 IDVYLDNVGGK--------------------------MLEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 235 ~d~vld~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
+|++|.+.|.. ..+.+...++..|+++.++....
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 99999998730 12234445567789998877544
No 340
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.65 E-value=0.014 Score=52.66 Aligned_cols=80 Identities=25% Similarity=0.385 Sum_probs=57.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC----Cc----eeecCChhh---HHHHHHHHC
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGY----DD----AFNYNSEMS---FDAALTKYF 231 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~----~~----v~~~~~~~~---~~~~i~~~~ 231 (356)
-.|.+++|+|+++|+|..++.-+...|++|+..+++.++.+.+++++.. .. ..|..+..+ +.+.+.+.
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~- 111 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK- 111 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc-
Confidence 4568999999999999999999999999999999998877777655442 21 123333223 33333321
Q ss_pred CCCceEEEECCc
Q 042784 232 PNGIDVYLDNVG 243 (356)
Q Consensus 232 ~~~~d~vld~~g 243 (356)
....|+.|.++|
T Consensus 112 ~~~ldvLInNAG 123 (314)
T KOG1208|consen 112 EGPLDVLINNAG 123 (314)
T ss_pred CCCccEEEeCcc
Confidence 246899999877
No 341
>PRK08264 short chain dehydrogenase; Validated
Probab=96.65 E-value=0.011 Score=51.18 Aligned_cols=75 Identities=21% Similarity=0.283 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC-c--eeecCChhhHHHHHHHHCCCCceEEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYD-D--AFNYNSEMSFDAALTKYFPNGIDVYL 239 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~~~~~d~vl 239 (356)
.+.+++|+||+|++|..+++.+...|+ +|++++++.++.+. .+.. . ..|..+..++.+.+.+. +.+|++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEE
Confidence 467899999999999999999999999 99999987765442 2221 1 13444434444433332 3589999
Q ss_pred ECCch
Q 042784 240 DNVGG 244 (356)
Q Consensus 240 d~~g~ 244 (356)
.+.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 98875
No 342
>PRK08309 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.23 Score=40.97 Aligned_cols=90 Identities=12% Similarity=0.094 Sum_probs=55.8
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC---ce--eecCChhhHHHHHHHHC--CCCceEEE
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD---DA--FNYNSEMSFDAALTKYF--PNGIDVYL 239 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~---~v--~~~~~~~~~~~~i~~~~--~~~~d~vl 239 (356)
+++|+||+ ++|..+++.+...|++|++.++++++.+.+...++.. .. .|..+..++...+.+.. .+++|.++
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv 80 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV 80 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 58999997 5555566666678999999998887766655334321 11 36666555555555432 35789999
Q ss_pred ECCchhhHHHHHHhcccC
Q 042784 240 DNVGGKMLEAVLNHVNVH 257 (356)
Q Consensus 240 d~~g~~~~~~~~~~l~~~ 257 (356)
+.+-...-.......+..
T Consensus 81 ~~vh~~~~~~~~~~~~~~ 98 (177)
T PRK08309 81 AWIHSSAKDALSVVCREL 98 (177)
T ss_pred EeccccchhhHHHHHHHH
Confidence 887665333333333333
No 343
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.017 Score=50.46 Aligned_cols=80 Identities=19% Similarity=0.174 Sum_probs=52.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHh---CCC-ce--eecCChhhHHHHHHHHC------
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGS-TGSDDNVKLLKEEF---GYD-DA--FNYNSEMSFDAALTKYF------ 231 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~-~~s~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~i~~~~------ 231 (356)
+.+++|+|++|++|..+++.+...|++|++. .++.++.+.+.+.+ +.. .+ .|..+..++.+.+.+..
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~ 85 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIR 85 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccc
Confidence 5799999999999999998888889988764 56665554333232 221 11 24444444444444321
Q ss_pred --CCCceEEEECCch
Q 042784 232 --PNGIDVYLDNVGG 244 (356)
Q Consensus 232 --~~~~d~vld~~g~ 244 (356)
.+++|++|.+.|.
T Consensus 86 ~~~~~id~vi~~ag~ 100 (254)
T PRK12746 86 VGTSEIDILVNNAGI 100 (254)
T ss_pred cCCCCccEEEECCCC
Confidence 1369999998873
No 344
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.63 E-value=0.037 Score=48.24 Aligned_cols=75 Identities=23% Similarity=0.332 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC---ceeecCChhhHHHHHHHHC--CCCceEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD---DAFNYNSEMSFDAALTKYF--PNGIDVY 238 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d~v 238 (356)
.+.++||+|++|++|...++.+...|++|++++++. .. ..+.. ...|..+...+.+.+.+.. .+.+|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LT-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hh-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999999999999999998888999999998765 22 22321 1124444344444444332 2469999
Q ss_pred EECCch
Q 042784 239 LDNVGG 244 (356)
Q Consensus 239 ld~~g~ 244 (356)
|.+.|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 998874
No 345
>PRK07577 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.0095 Score=51.33 Aligned_cols=75 Identities=23% Similarity=0.234 Sum_probs=51.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHC-CCCceEEEECCc
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYF-PNGIDVYLDNVG 243 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~-~~~~d~vld~~g 243 (356)
+.+++|+|++|++|...++.+...|.+|+++.++.++ ... ......|..+..++.+.+.++. ..++|++|.+.|
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-~~~----~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag 77 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-DFP----GELFACDLADIEQTAATLAQINEIHPVDAIVNNVG 77 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-ccC----ceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 5789999999999999999988999999999877654 110 1112245554344444444433 236899999887
Q ss_pred h
Q 042784 244 G 244 (356)
Q Consensus 244 ~ 244 (356)
.
T Consensus 78 ~ 78 (234)
T PRK07577 78 I 78 (234)
T ss_pred C
Confidence 3
No 346
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.019 Score=49.09 Aligned_cols=77 Identities=16% Similarity=0.249 Sum_probs=51.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcee--ecCChhhHHHHHHHHCCCCceEEEECC
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAF--NYNSEMSFDAALTKYFPNGIDVYLDNV 242 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~--~~~~~~~~~~~i~~~~~~~~d~vld~~ 242 (356)
..++||+|++|.+|...+..+... .+|++++++.++.+.+.+.+...+++ |..+..++.+.+.+. +++|.+|.+.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~a 79 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNA 79 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECC
Confidence 358999999999999988766666 99999998887766555333222222 333323333333322 2699999988
Q ss_pred ch
Q 042784 243 GG 244 (356)
Q Consensus 243 g~ 244 (356)
|.
T Consensus 80 g~ 81 (227)
T PRK08219 80 GV 81 (227)
T ss_pred Cc
Confidence 73
No 347
>PLN00015 protochlorophyllide reductase
Probab=96.62 E-value=0.014 Score=52.80 Aligned_cols=75 Identities=16% Similarity=0.188 Sum_probs=52.3
Q ss_pred EEEcCCChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHhCCC--c----eeecCChhhHHHHHHHHC--CCCceEEE
Q 042784 169 FVSAAAGGVGMFAGQLAKLKG-CKVVGSTGSDDNVKLLKEEFGYD--D----AFNYNSEMSFDAALTKYF--PNGIDVYL 239 (356)
Q Consensus 169 lV~g~~g~vG~~~i~la~~~G-~~V~~~~~s~~~~~~~~~~~g~~--~----v~~~~~~~~~~~~i~~~~--~~~~d~vl 239 (356)
+|+|+++++|.++++.+...| ++|+.+++++++.+.+.++++.. . ..|..+..++.+.+.++. .+++|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 589999999999888888889 89999998888776555455321 1 235555344444444332 24699999
Q ss_pred ECCc
Q 042784 240 DNVG 243 (356)
Q Consensus 240 d~~g 243 (356)
.+.|
T Consensus 81 nnAG 84 (308)
T PLN00015 81 CNAA 84 (308)
T ss_pred ECCC
Confidence 9886
No 348
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.0071 Score=53.11 Aligned_cols=76 Identities=20% Similarity=0.293 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-ceeecCChhhHHHHHHHHC--CCCceEEEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-DAFNYNSEMSFDAALTKYF--PNGIDVYLD 240 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~--~~~~d~vld 240 (356)
.|.++||+|++|++|...++.+...|++|++++++.++. .. -... ...|..+..++.+.+.++. -+++|++++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 83 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LP--EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH 83 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cC--CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 478999999999999999998888999999999775431 11 0111 1224444333333333221 246999999
Q ss_pred CCc
Q 042784 241 NVG 243 (356)
Q Consensus 241 ~~g 243 (356)
+.|
T Consensus 84 ~ag 86 (260)
T PRK06523 84 VLG 86 (260)
T ss_pred CCc
Confidence 887
No 349
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.62 E-value=0.011 Score=54.41 Aligned_cols=77 Identities=14% Similarity=0.124 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC--C---ceeecCChhhHHHHHHHHCCCCceEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGY--D---DAFNYNSEMSFDAALTKYFPNGIDVY 238 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~--~---~v~~~~~~~~~~~~i~~~~~~~~d~v 238 (356)
.|.+|||+||+|.+|..+++.+...|.+|+++++++.........++. . ...|..+..++.+.+.+ .++|+|
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~~d~v 79 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAE---FKPEIV 79 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhh---cCCCEE
Confidence 468999999999999999999999999999988766543322112221 1 11233332334343332 258999
Q ss_pred EECCc
Q 042784 239 LDNVG 243 (356)
Q Consensus 239 ld~~g 243 (356)
|.+.+
T Consensus 80 ih~A~ 84 (349)
T TIGR02622 80 FHLAA 84 (349)
T ss_pred EECCc
Confidence 99887
No 350
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.62 E-value=0.02 Score=50.78 Aligned_cols=107 Identities=14% Similarity=0.120 Sum_probs=67.6
Q ss_pred hhHHHHHHHhC--CCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCce-eecCChhhHHH
Q 042784 150 FAAWVGIEVLG--QPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDA-FNYNSEMSFDA 225 (356)
Q Consensus 150 ~ta~~~l~~~~--~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v-~~~~~~~~~~~ 225 (356)
.--+.+|.+.. ...+|++++|.|+ ||.+.+++.-++..|+ +|+++.|+.+|.+.+.+.++.... +....
T Consensus 109 ~G~~~~L~~~~~~~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~------ 181 (283)
T COG0169 109 IGFLRALKEFGLPVDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA------ 181 (283)
T ss_pred HHHHHHHHhcCCCcccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc------
Confidence 33344554322 2345899999997 9999999999999997 899999999998888766664321 00000
Q ss_pred HHHHHCCC-CceEEEECCchhh-------HHHHHHhcccCCEEEEEec
Q 042784 226 ALTKYFPN-GIDVYLDNVGGKM-------LEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 226 ~i~~~~~~-~~d~vld~~g~~~-------~~~~~~~l~~~G~~v~~g~ 265 (356)
...+... .+|++|+|+.-.. .-. ..++.+.-.+..+-.
T Consensus 182 -~~~~~~~~~~dliINaTp~Gm~~~~~~~~~~-~~~l~~~~~v~D~vY 227 (283)
T COG0169 182 -LADLEGLEEADLLINATPVGMAGPEGDSPVP-AELLPKGAIVYDVVY 227 (283)
T ss_pred -ccccccccccCEEEECCCCCCCCCCCCCCCc-HHhcCcCCEEEEecc
Confidence 0001111 4899999986421 111 455666666655544
No 351
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.62 E-value=0.054 Score=45.12 Aligned_cols=97 Identities=12% Similarity=0.127 Sum_probs=60.7
Q ss_pred hCCCCCCCEEEEEcCCChHHHHHHHHHHHC-C-CEEEEEeCChHHHHHHHHHhCCCcee--ecCChhhHHHHHHHHC-CC
Q 042784 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLK-G-CKVVGSTGSDDNVKLLKEEFGYDDAF--NYNSEMSFDAALTKYF-PN 233 (356)
Q Consensus 159 ~~~~~~g~~VlV~g~~g~vG~~~i~la~~~-G-~~V~~~~~s~~~~~~~~~~~g~~~v~--~~~~~~~~~~~i~~~~-~~ 233 (356)
...+++|++||..|+ |.-++ +..+++.. + .+|++++.++.. . ..+.. ++ |..+ ....+.+.+.. ++
T Consensus 27 ~~~i~~g~~VLDiG~-GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~-~~~i~-~~~~d~~~-~~~~~~l~~~~~~~ 97 (188)
T TIGR00438 27 FKLIKPGDTVLDLGA-APGGW-SQVAVEQVGGKGRVIAVDLQPMK----P-IENVD-FIRGDFTD-EEVLNKIRERVGDD 97 (188)
T ss_pred hcccCCCCEEEEecC-CCCHH-HHHHHHHhCCCceEEEEeccccc----c-CCCce-EEEeeCCC-hhHHHHHHHHhCCC
Confidence 456789999999995 54444 44455444 3 389999988754 1 22332 22 3332 23334455444 45
Q ss_pred CceEEEEC-----Cc-------------hhhHHHHHHhcccCCEEEEEe
Q 042784 234 GIDVYLDN-----VG-------------GKMLEAVLNHVNVHARIILCG 264 (356)
Q Consensus 234 ~~d~vld~-----~g-------------~~~~~~~~~~l~~~G~~v~~g 264 (356)
++|+|+.. .| ...+..+.++|+++|+++...
T Consensus 98 ~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 98 KVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred CccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 79999952 22 135677889999999998754
No 352
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.62 E-value=0.026 Score=50.39 Aligned_cols=94 Identities=16% Similarity=0.034 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCC----CceeecCChhhHHHHHHHHCCCCceE
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGY----DDAFNYNSEMSFDAALTKYFPNGIDV 237 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~----~~v~~~~~~~~~~~~i~~~~~~~~d~ 237 (356)
..+.+|+|.|+ |++|.+++..+...|+ +|++++++.++.+.+.+.++. ..+... .++.+.+ ..+|+
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~---~~~~~~~-----~~aDi 195 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG---SDLAAAL-----AAADG 195 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec---cchHhhh-----CCCCE
Confidence 35689999997 9999999999999999 899999998888777645432 112211 1222222 34899
Q ss_pred EEECCchh-----hHHHHHHhcccCCEEEEEec
Q 042784 238 YLDNVGGK-----MLEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 238 vld~~g~~-----~~~~~~~~l~~~G~~v~~g~ 265 (356)
||+|+... ........+++...++.+-.
T Consensus 196 VInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY 228 (284)
T PRK12549 196 LVHATPTGMAKHPGLPLPAELLRPGLWVADIVY 228 (284)
T ss_pred EEECCcCCCCCCCCCCCCHHHcCCCcEEEEeee
Confidence 99996421 10111234566555555543
No 353
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.61 E-value=0.015 Score=52.98 Aligned_cols=95 Identities=13% Similarity=0.133 Sum_probs=66.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHH-HHCCC-EEEEEeCChHHHHHHHHHh----CCCceeecCChhhHHHHHHHHCCCCce
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLA-KLKGC-KVVGSTGSDDNVKLLKEEF----GYDDAFNYNSEMSFDAALTKYFPNGID 236 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la-~~~G~-~V~~~~~s~~~~~~~~~~~----g~~~v~~~~~~~~~~~~i~~~~~~~~d 236 (356)
+...+++|.|+ |+.|.+.+..+ ...++ +|.+..+++++.+.+.+++ +.. +..+. ++.+.++ .+|
T Consensus 125 ~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~---~~~~~~~-----~aD 194 (325)
T PRK08618 125 EDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN---SADEAIE-----EAD 194 (325)
T ss_pred CCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC---CHHHHHh-----cCC
Confidence 45678999996 99998776544 46687 8889999988877665443 332 22332 3444442 489
Q ss_pred EEEECCchhhHHHHHHhcccCCEEEEEecccc
Q 042784 237 VYLDNVGGKMLEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 237 ~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
+|+.|++....... +.++++-++..+|....
T Consensus 195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~p 225 (325)
T PRK08618 195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSFMP 225 (325)
T ss_pred EEEEccCCCCcchH-HhcCCCcEEEecCCCCc
Confidence 99999987633334 88999999999988654
No 354
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.61 E-value=0.014 Score=50.72 Aligned_cols=80 Identities=29% Similarity=0.397 Sum_probs=52.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHh---CCCc-e--eecCChhhHHHHHHHHC--CCCc
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGS-TGSDDNVKLLKEEF---GYDD-A--FNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~-~~s~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
+.++||+|++|++|...+..+...|++|+++ .++.++.+.+.+.+ +... + .|..+..++.+.+.+.. -+++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999988887889999888 87776655443232 2211 1 24444333333333221 1369
Q ss_pred eEEEECCch
Q 042784 236 DVYLDNVGG 244 (356)
Q Consensus 236 d~vld~~g~ 244 (356)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (247)
T PRK05565 85 DILVNNAGI 93 (247)
T ss_pred CEEEECCCc
Confidence 999998863
No 355
>PRK05599 hypothetical protein; Provisional
Probab=96.60 E-value=0.013 Score=51.13 Aligned_cols=77 Identities=12% Similarity=0.136 Sum_probs=50.8
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCC--ce--eecCChhhHHHHHHHHC--CCCceE
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYD--DA--FNYNSEMSFDAALTKYF--PNGIDV 237 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~--~v--~~~~~~~~~~~~i~~~~--~~~~d~ 237 (356)
+++|+|+++++|.+.+..+. .|.+|+.+++++++.+.+.+++ |.. .. .|..+..++.+.+.++. -+++|+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 80 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL 80 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence 68999999999999877665 4999999999888776654333 322 12 24444333333333322 246999
Q ss_pred EEECCch
Q 042784 238 YLDNVGG 244 (356)
Q Consensus 238 vld~~g~ 244 (356)
++.+.|.
T Consensus 81 lv~nag~ 87 (246)
T PRK05599 81 AVVAFGI 87 (246)
T ss_pred EEEecCc
Confidence 9988773
No 356
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.59 E-value=0.044 Score=50.97 Aligned_cols=94 Identities=19% Similarity=0.235 Sum_probs=66.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEEC
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDN 241 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~ 241 (356)
-.+.++||.|+ |-+|..++..+...|. +|++..++.++.+.+.+++|+. +..+ .++.+.+. .+|+||-+
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l---~el~~~l~-----~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVAL---EELLEALA-----EADVVISS 245 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecH---HHHHHhhh-----hCCEEEEe
Confidence 35889999998 9999999999999997 8999999999988777799954 4433 33444443 38999999
Q ss_pred Cchh----hHHHHHHhcccCC--EEEEEecc
Q 042784 242 VGGK----MLEAVLNHVNVHA--RIILCGMI 266 (356)
Q Consensus 242 ~g~~----~~~~~~~~l~~~G--~~v~~g~~ 266 (356)
+|.+ ......+.++..- -++.++.+
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 9875 2233444444433 34555554
No 357
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=96.59 E-value=0.51 Score=42.29 Aligned_cols=56 Identities=21% Similarity=0.372 Sum_probs=48.0
Q ss_pred hCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC---ChHHHHHHHHHhCCCcee
Q 042784 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTG---SDDNVKLLKEEFGYDDAF 215 (356)
Q Consensus 159 ~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~---s~~~~~~~~~~~g~~~v~ 215 (356)
.+.+.||.++||-.-+|.+|.....++...|.+++++-. +.+|...++ .||+..+.
T Consensus 97 ~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~-a~Gaeii~ 155 (362)
T KOG1252|consen 97 KGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLR-ALGAEIIL 155 (362)
T ss_pred cCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHH-HcCCEEEe
Confidence 477899999999999999999999999999999888864 457778888 89987443
No 358
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.58 E-value=0.013 Score=51.01 Aligned_cols=81 Identities=31% Similarity=0.355 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-ChHHH-HHHHH--HhCCCce---eecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTG-SDDNV-KLLKE--EFGYDDA---FNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~-s~~~~-~~~~~--~~g~~~v---~~~~~~~~~~~~i~~~~--~~~ 234 (356)
.+.+++|+|++|++|..+++.+...|++|++... +..+. +.+.+ ..+.... .|..+..++.+.+.+.. .++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3678999999999999999999999998877543 23222 22220 2343322 34444334444333322 247
Q ss_pred ceEEEECCch
Q 042784 235 IDVYLDNVGG 244 (356)
Q Consensus 235 ~d~vld~~g~ 244 (356)
+|+++.+.|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 359
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.57 E-value=0.026 Score=50.52 Aligned_cols=46 Identities=20% Similarity=0.236 Sum_probs=35.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCh---HHHHHHHHHh
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSD---DNVKLLKEEF 209 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~---~~~~~~~~~~ 209 (356)
..+.+++|+|+ ||+|.+++..+...|+ +|+++.++. ++.+.+.+++
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l 173 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKI 173 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHH
Confidence 35789999998 9999999888888999 599999885 4544443344
No 360
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=96.57 E-value=0.036 Score=48.00 Aligned_cols=104 Identities=15% Similarity=0.082 Sum_probs=69.7
Q ss_pred HhCCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHHHHHC-
Q 042784 158 VLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKG--CKVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAALTKYF- 231 (356)
Q Consensus 158 ~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G--~~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~- 231 (356)
...+..++++||=.| .+.|..++.+++..+ .+|+.++.+++..+.+++ +.|....+.... .+..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~-gda~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ-SDALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE-ccHHHHHHHHHh
Confidence 345567788999998 567777777787763 499999999988777764 335433233222 34444454442
Q ss_pred ---CCCceEEEECCch----hhHHHHHHhcccCCEEEEEe
Q 042784 232 ---PNGIDVYLDNVGG----KMLEAVLNHVNVHARIILCG 264 (356)
Q Consensus 232 ---~~~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~g 264 (356)
.+.||+||--... ..+..+++.++++|.++.-.
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~dn 178 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDN 178 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 2479999854432 36788899999999877543
No 361
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.56 E-value=0.015 Score=49.59 Aligned_cols=100 Identities=18% Similarity=0.184 Sum_probs=66.3
Q ss_pred HhCCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHH---hCCCceeecCChhhHHHHHHHHCC
Q 042784 158 VLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKG--CKVVGSTGSDDNVKLLKEE---FGYDDAFNYNSEMSFDAALTKYFP 232 (356)
Q Consensus 158 ~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G--~~V~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~ 232 (356)
+..+++++++||-.| .|.|..+..+++..+ .+|++++.+++-.+.+++. +|...+ .... .+..+.. ...
T Consensus 70 ~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v-~~~~-gd~~~~~--~~~ 143 (212)
T PRK13942 70 ELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNV-EVIV-GDGTLGY--EEN 143 (212)
T ss_pred HHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEE-CCcccCC--CcC
Confidence 456789999999999 567888888888876 4999999998887777643 333211 1111 1111100 012
Q ss_pred CCceEEEECCch-hhHHHHHHhcccCCEEEEE
Q 042784 233 NGIDVYLDNVGG-KMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 233 ~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~ 263 (356)
+.||+|+-.... ......++.|+++|+++..
T Consensus 144 ~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 144 APYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred CCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 469999765443 4556778899999998764
No 362
>PRK00811 spermidine synthase; Provisional
Probab=96.56 E-value=0.025 Score=50.50 Aligned_cols=97 Identities=12% Similarity=0.074 Sum_probs=64.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCC-------CceeecCChhhHHHHHHHHCCCC
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGY-------DDAFNYNSEMSFDAALTKYFPNG 234 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~-------~~v~~~~~~~~~~~~i~~~~~~~ 234 (356)
...++||+.| +|.|..+..+++..+. +|.+++.+++-.+.+++-+.. +.-+.... .+..+.+.. ..+.
T Consensus 75 ~~p~~VL~iG--~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~-~Da~~~l~~-~~~~ 150 (283)
T PRK00811 75 PNPKRVLIIG--GGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI-GDGIKFVAE-TENS 150 (283)
T ss_pred CCCCEEEEEe--cCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE-CchHHHHhh-CCCc
Confidence 4568999999 4557778888887676 999999999888888754421 11111111 333333433 3457
Q ss_pred ceEEEECCc-----------hhhHHHHHHhcccCCEEEEE
Q 042784 235 IDVYLDNVG-----------GKMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 235 ~d~vld~~g-----------~~~~~~~~~~l~~~G~~v~~ 263 (356)
+|+|+--.. .+.+..+.+.|+++|.++.-
T Consensus 151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 999985331 12467788999999998864
No 363
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.55 E-value=0.033 Score=46.37 Aligned_cols=96 Identities=18% Similarity=0.217 Sum_probs=63.3
Q ss_pred CCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHHHHHCCCCce
Q 042784 161 QPKSGSNVFVSAAAGGVGMFAGQLAKLK-GCKVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAALTKYFPNGID 236 (356)
Q Consensus 161 ~~~~g~~VlV~g~~g~vG~~~i~la~~~-G~~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~~~~d 236 (356)
.++++.+||-.|+ |.|..++.+++.. +++|++++.+++..+.+++ +.+... +.... .+..+ +.. .+.+|
T Consensus 42 ~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~-~d~~~-~~~--~~~fD 114 (187)
T PRK00107 42 YLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVH-GRAEE-FGQ--EEKFD 114 (187)
T ss_pred hcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEe-ccHhh-CCC--CCCcc
Confidence 3566899999984 4566677777655 5699999999887766653 344433 22211 22222 211 34799
Q ss_pred EEEECCch---hhHHHHHHhcccCCEEEEE
Q 042784 237 VYLDNVGG---KMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 237 ~vld~~g~---~~~~~~~~~l~~~G~~v~~ 263 (356)
+|+..... ..+..+.+.|+++|+++.+
T Consensus 115 lV~~~~~~~~~~~l~~~~~~LkpGG~lv~~ 144 (187)
T PRK00107 115 VVTSRAVASLSDLVELCLPLLKPGGRFLAL 144 (187)
T ss_pred EEEEccccCHHHHHHHHHHhcCCCeEEEEE
Confidence 99975432 3677889999999999876
No 364
>PLN02366 spermidine synthase
Probab=96.55 E-value=0.026 Score=50.81 Aligned_cols=99 Identities=13% Similarity=0.052 Sum_probs=64.3
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCC------CceeecCChhhHHHHHHHHCCCC
Q 042784 162 PKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGY------DDAFNYNSEMSFDAALTKYFPNG 234 (356)
Q Consensus 162 ~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~------~~v~~~~~~~~~~~~i~~~~~~~ 234 (356)
....++||+.|+ |-|..+..+++..+. +|.+++.+++-.+.+++-|.. +.-+.... .|..+.+++..++.
T Consensus 89 ~~~pkrVLiIGg--G~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~-~Da~~~l~~~~~~~ 165 (308)
T PLN02366 89 IPNPKKVLVVGG--GDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI-GDGVEFLKNAPEGT 165 (308)
T ss_pred CCCCCeEEEEcC--CccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE-ChHHHHHhhccCCC
Confidence 355789999995 347777888888775 899999888777777743432 10111111 33434444433457
Q ss_pred ceEEEECCch-----------hhHHHHHHhcccCCEEEEE
Q 042784 235 IDVYLDNVGG-----------KMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 235 ~d~vld~~g~-----------~~~~~~~~~l~~~G~~v~~ 263 (356)
+|+||--... +.+..+.++|+++|.++.-
T Consensus 166 yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q 205 (308)
T PLN02366 166 YDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ 205 (308)
T ss_pred CCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence 9999853221 2577888999999998754
No 365
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.55 E-value=0.033 Score=47.43 Aligned_cols=94 Identities=19% Similarity=0.243 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC--ceeecCChhhHHHHHHHHCCCCceEEEE
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD--DAFNYNSEMSFDAALTKYFPNGIDVYLD 240 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~i~~~~~~~~d~vld 240 (356)
-+|.+||=.|+.|| +++ +-+...|++|++++.+++..+.++ ..... --+||.. ...+.+... ++.||+|++
T Consensus 58 l~g~~vLDvGCGgG--~Ls-e~mAr~Ga~VtgiD~se~~I~~Ak-~ha~e~gv~i~y~~--~~~edl~~~-~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGGG--ILS-EPLARLGASVTGIDASEKPIEVAK-LHALESGVNIDYRQ--ATVEDLASA-GGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCcc--Hhh-HHHHHCCCeeEEecCChHHHHHHH-Hhhhhccccccchh--hhHHHHHhc-CCCccEEEE
Confidence 47889999997554 433 444556899999999999999887 22221 1255653 333333322 257999986
Q ss_pred C-----Cch--hhHHHHHHhcccCCEEEEE
Q 042784 241 N-----VGG--KMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 241 ~-----~g~--~~~~~~~~~l~~~G~~v~~ 263 (356)
- +.. ..+..+.++++|+|+++..
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 3 233 2677899999999998753
No 366
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.53 E-value=0.025 Score=48.97 Aligned_cols=81 Identities=23% Similarity=0.323 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHH---hCCC-cee--ecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDN-VKLLKEE---FGYD-DAF--NYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~-~~~~~~~---~g~~-~v~--~~~~~~~~~~~i~~~~--~~~ 234 (356)
.+.+++|+|++|++|...+..+...|++|+++.++..+ .+...+. .+.. ..+ |..+..++.+.+.++. -++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999998899998777665442 2222212 2322 122 4444344444344332 136
Q ss_pred ceEEEECCch
Q 042784 235 IDVYLDNVGG 244 (356)
Q Consensus 235 ~d~vld~~g~ 244 (356)
+|.++.+.|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 367
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.015 Score=51.52 Aligned_cols=81 Identities=23% Similarity=0.358 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHH-------HHHHHH---HhCCCc---eeecCChhhHHHHHHHH
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDN-------VKLLKE---EFGYDD---AFNYNSEMSFDAALTKY 230 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~-------~~~~~~---~~g~~~---v~~~~~~~~~~~~i~~~ 230 (356)
.+.+++|+||+|++|..+++.+...|++|++++++.+. .+.+.+ ..+... ..|..+...+.+.+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 46799999999999999999888899999999876542 111111 233321 13444434444333332
Q ss_pred C--CCCceEEEECCch
Q 042784 231 F--PNGIDVYLDNVGG 244 (356)
Q Consensus 231 ~--~~~~d~vld~~g~ 244 (356)
. -+.+|++|.+.|.
T Consensus 85 ~~~~g~id~li~~ag~ 100 (273)
T PRK08278 85 VERFGGIDICVNNASA 100 (273)
T ss_pred HHHhCCCCEEEECCCC
Confidence 1 1369999998873
No 368
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=96.52 E-value=0.016 Score=50.90 Aligned_cols=105 Identities=10% Similarity=0.093 Sum_probs=64.2
Q ss_pred CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCC------hHHHHHHHHHhCCC--ceeecCChhhHHHHHHHHC--
Q 042784 164 SGSNVFVSAAA--GGVGMFAGQLAKLKGCKVVGSTGS------DDNVKLLKEEFGYD--DAFNYNSEMSFDAALTKYF-- 231 (356)
Q Consensus 164 ~g~~VlV~g~~--g~vG~~~i~la~~~G~~V~~~~~s------~~~~~~~~~~~g~~--~v~~~~~~~~~~~~i~~~~-- 231 (356)
.|++++|+|++ +++|.++++.+...|++|+.+.++ ++..+.++++.+.. ...|..+..+..+.+.++.
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 47899999985 799999998888899999877533 22233333222211 1234444344444333332
Q ss_pred CCCceEEEECCchh---------------h---------------HHHHHHhcccCCEEEEEecccc
Q 042784 232 PNGIDVYLDNVGGK---------------M---------------LEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 232 ~~~~d~vld~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
.+.+|+++.+.|.. . .+.++..++.+|+++.++...+
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~ 151 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG 151 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence 24699999988721 0 1334556667799988876443
No 369
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.50 E-value=0.026 Score=50.33 Aligned_cols=75 Identities=15% Similarity=0.022 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCc-eeecCChhhHHHHHHHHCCCCceEEEEC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDD-AFNYNSEMSFDAALTKYFPNGIDVYLDN 241 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vld~ 241 (356)
.+.+++|.|+ |+.+.+++..+...|+ +|+++.|+.++.+.+.+.++... +.... .+ +.+.+.. ..+|+||+|
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~---~~-~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE---GD-SGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc---ch-hhhhhcc-cCCCEEEEC
Confidence 5789999997 9999999999999998 89999999988877765665321 11111 01 1111111 358999999
Q ss_pred Cch
Q 042784 242 VGG 244 (356)
Q Consensus 242 ~g~ 244 (356)
+..
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 875
No 370
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.018 Score=49.99 Aligned_cols=77 Identities=13% Similarity=0.167 Sum_probs=51.2
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCC-ce--eecCChhhHHHHHHHHCCCCceEE
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF----GYD-DA--FNYNSEMSFDAALTKYFPNGIDVY 238 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~i~~~~~~~~d~v 238 (356)
.+++|+||+|++|...++.+...|++|+++++++++.+.+.+.+ +.. .+ .|..+..++.+.+.+.. ..+|++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~v 80 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDIV 80 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCEE
Confidence 57999999999999999888888999999998887665443222 111 11 23333233444343332 247999
Q ss_pred EECCc
Q 042784 239 LDNVG 243 (356)
Q Consensus 239 ld~~g 243 (356)
+.+.|
T Consensus 81 v~~ag 85 (243)
T PRK07102 81 LIAVG 85 (243)
T ss_pred EECCc
Confidence 98776
No 371
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.48 E-value=0.025 Score=49.73 Aligned_cols=81 Identities=20% Similarity=0.185 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHH---HhCCC---ceeecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSD-DNVKLLKE---EFGYD---DAFNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~-~~~~~~~~---~~g~~---~v~~~~~~~~~~~~i~~~~--~~~ 234 (356)
.+.+++|+||+|++|..+++.+...|++|+.+.++. +..+.+.+ ..+.. ...|..+..++.+.+.++. .++
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999888877643 33332221 22332 1224444333333333321 246
Q ss_pred ceEEEECCch
Q 042784 235 IDVYLDNVGG 244 (356)
Q Consensus 235 ~d~vld~~g~ 244 (356)
+|+++.+.|.
T Consensus 86 id~lv~~ag~ 95 (261)
T PRK08936 86 LDVMINNAGI 95 (261)
T ss_pred CCEEEECCCC
Confidence 9999998873
No 372
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.47 E-value=0.03 Score=47.44 Aligned_cols=101 Identities=15% Similarity=0.149 Sum_probs=65.8
Q ss_pred HhCCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHH---hCCCceeecCChhhHHHHHHHHCC
Q 042784 158 VLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKG--CKVVGSTGSDDNVKLLKEE---FGYDDAFNYNSEMSFDAALTKYFP 232 (356)
Q Consensus 158 ~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G--~~V~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~ 232 (356)
+...++++++||=.| .|.|..+..+++..+ .+|++++.+++-.+.+++. ++....+.... .+..+.+.. .
T Consensus 66 ~~l~~~~~~~VLDiG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~-~d~~~~~~~--~ 140 (205)
T PRK13944 66 ELIEPRPGMKILEVG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYH-GDGKRGLEK--H 140 (205)
T ss_pred HhcCCCCCCEEEEEC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEE-CCcccCCcc--C
Confidence 456678999999998 466888888888774 4999999998877666543 34321111110 122111111 2
Q ss_pred CCceEEEECCchh-hHHHHHHhcccCCEEEEE
Q 042784 233 NGIDVYLDNVGGK-MLEAVLNHVNVHARIILC 263 (356)
Q Consensus 233 ~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~ 263 (356)
+.||+|+-+.... ......+.|+++|+++..
T Consensus 141 ~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 141 APFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred CCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 4699998766543 456778899999998753
No 373
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=96.47 E-value=0.016 Score=51.96 Aligned_cols=74 Identities=26% Similarity=0.416 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHH---HHHHHHhCC-Cc---ee--ecCChhhHHHHHHHHCCCC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNV---KLLKEEFGY-DD---AF--NYNSEMSFDAALTKYFPNG 234 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~---~~~~~~~g~-~~---v~--~~~~~~~~~~~i~~~~~~~ 234 (356)
.+.+|+|+||+|=+|.+.+..+...|.+|.+++|++++. +.++ +|.. .+ ++ |..+...+.+.+ .|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~-~l~~a~~~l~l~~aDL~d~~sf~~ai-----~g 78 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLR-KLEGAKERLKLFKADLLDEGSFDKAI-----DG 78 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHH-hcccCcccceEEeccccccchHHHHH-----hC
Confidence 578999999999999999999999999999999988763 3455 5442 21 11 222224455555 46
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|.||.++.
T Consensus 79 cdgVfH~As 87 (327)
T KOG1502|consen 79 CDGVFHTAS 87 (327)
T ss_pred CCEEEEeCc
Confidence 999998765
No 374
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.47 E-value=0.034 Score=49.22 Aligned_cols=78 Identities=17% Similarity=0.130 Sum_probs=54.9
Q ss_pred hHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHH
Q 042784 151 AAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTK 229 (356)
Q Consensus 151 ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~ 229 (356)
-...++.+ .....+.+++|.|+ ||.+.+++..++..|+ +|+++.+++++.+.+.+.++.. + ...+
T Consensus 109 Gf~~~L~~-~~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~------~~~~-- 174 (272)
T PRK12550 109 AIAKLLAS-YQVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----W------RPDL-- 174 (272)
T ss_pred HHHHHHHh-cCCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----c------hhhc--
Confidence 33445543 23445679999997 9999999999999998 7999999998888776555421 1 0111
Q ss_pred HCCCCceEEEECCc
Q 042784 230 YFPNGIDVYLDNVG 243 (356)
Q Consensus 230 ~~~~~~d~vld~~g 243 (356)
....+|+|++|+.
T Consensus 175 -~~~~~dlvINaTp 187 (272)
T PRK12550 175 -GGIEADILVNVTP 187 (272)
T ss_pred -ccccCCEEEECCc
Confidence 1134899999975
No 375
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.47 E-value=0.031 Score=44.85 Aligned_cols=95 Identities=19% Similarity=0.174 Sum_probs=63.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHhCCCc-eeecCChhhHHHHHHHHCCCCceEEEE
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKG-CKVVGSTGSDDNVKLLKEEFGYDD-AFNYNSEMSFDAALTKYFPNGIDVYLD 240 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G-~~V~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vld 240 (356)
..+.+++|.|+ |++|...++.+...| .+|++.+++.++.+.+.++++... ..+.. +..+.+ .++|+|+.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL---DLEELL-----AEADLIIN 87 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec---chhhcc-----ccCCEEEe
Confidence 45789999997 999999998888886 589999988888776654666431 11121 222222 45999999
Q ss_pred CCchhhH-----HHHHHhcccCCEEEEEecc
Q 042784 241 NVGGKML-----EAVLNHVNVHARIILCGMI 266 (356)
Q Consensus 241 ~~g~~~~-----~~~~~~l~~~G~~v~~g~~ 266 (356)
|++.... ......++++..++.++..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 88 TTPVGMKPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred CcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 9886432 1122446777777777553
No 376
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.46 E-value=0.023 Score=47.89 Aligned_cols=92 Identities=12% Similarity=0.041 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDD-NVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNV 242 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~-~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~ 242 (356)
.|.+|||.|+ |.+|...+..+...|++|+++.+... ....+. .-+.- .+... .+.+. .+ .++|+||-|+
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~-~~~~i-~~~~~---~~~~~--~l--~~adlViaaT 78 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLV-EEGKI-RWKQK---EFEPS--DI--VDAFLVIAAT 78 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH-hCCCE-EEEec---CCChh--hc--CCceEEEEcC
Confidence 4789999998 99999999888889999988864321 222222 11211 11111 11110 01 3689999999
Q ss_pred chhhHHHHHHhcccCCEEEEEec
Q 042784 243 GGKMLEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 243 g~~~~~~~~~~l~~~G~~v~~g~ 265 (356)
+++.++..+......+.++.+.+
T Consensus 79 ~d~elN~~i~~~a~~~~lvn~~d 101 (202)
T PRK06718 79 NDPRVNEQVKEDLPENALFNVIT 101 (202)
T ss_pred CCHHHHHHHHHHHHhCCcEEECC
Confidence 99866665554444466665544
No 377
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.46 E-value=0.014 Score=56.51 Aligned_cols=73 Identities=15% Similarity=0.124 Sum_probs=53.9
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEEC
Q 042784 162 PKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDN 241 (356)
Q Consensus 162 ~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~ 241 (356)
+.+|++|+|.|. |..|++++++++..|++|++.+..+.+.+.++ ++|.. ++... ...+.+ ..+|+|+.+
T Consensus 9 ~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~-~~g~~-~~~~~---~~~~~l-----~~~D~VV~S 77 (488)
T PRK03369 9 LLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHA-ERGVA-TVSTS---DAVQQI-----ADYALVVTS 77 (488)
T ss_pred ccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-hCCCE-EEcCc---chHhHh-----hcCCEEEEC
Confidence 567899999997 99999999999999999999997766666666 66764 33221 112223 247999998
Q ss_pred Cchh
Q 042784 242 VGGK 245 (356)
Q Consensus 242 ~g~~ 245 (356)
-|-+
T Consensus 78 pGi~ 81 (488)
T PRK03369 78 PGFR 81 (488)
T ss_pred CCCC
Confidence 8853
No 378
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.019 Score=57.71 Aligned_cols=79 Identities=18% Similarity=0.309 Sum_probs=55.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCc---eeecCChhhHHHHHHHHC--CCCce
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYDD---AFNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
+.+++|+||+|++|..++..+...|++|+++++++++.+.+.+++ +... ..|..+..++.+.+.++. -+++|
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 450 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD 450 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 678999999999999999888888999999999888766554332 3221 124444344444444332 24699
Q ss_pred EEEECCc
Q 042784 237 VYLDNVG 243 (356)
Q Consensus 237 ~vld~~g 243 (356)
+++.+.|
T Consensus 451 ~li~~Ag 457 (657)
T PRK07201 451 YLVNNAG 457 (657)
T ss_pred EEEECCC
Confidence 9999987
No 379
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.45 E-value=0.043 Score=46.39 Aligned_cols=92 Identities=17% Similarity=0.176 Sum_probs=60.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDD-NVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNV 242 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~-~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~ 242 (356)
.|.+|||.|+ |.+|..-++.+...|++|++++.... ....+. +.|.- .+...+ +... .+ .++|+|+-++
T Consensus 8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~i-~~~~~~---~~~~--dl--~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGGI-TWLARC---FDAD--IL--EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCCE-EEEeCC---CCHH--Hh--CCcEEEEECC
Confidence 3789999998 99999999999999999998875432 333333 33421 121111 1111 11 4699999999
Q ss_pred chh-hHHHHHHhcccCCEEEEEec
Q 042784 243 GGK-MLEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 243 g~~-~~~~~~~~l~~~G~~v~~g~ 265 (356)
+.+ .........+..|..+.+..
T Consensus 78 ~d~~ln~~i~~~a~~~~ilvn~~d 101 (205)
T TIGR01470 78 DDEELNRRVAHAARARGVPVNVVD 101 (205)
T ss_pred CCHHHHHHHHHHHHHcCCEEEECC
Confidence 987 44456666677787776544
No 380
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.44 E-value=0.074 Score=42.90 Aligned_cols=88 Identities=11% Similarity=0.143 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
.|.+|+|.|| |.+|..-++.+...|++|++++ ++..+.++ +++.. .++.. .+.+. .+ .++|+|+-+++
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~-~l~~i-~~~~~---~~~~~--dl--~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMK-ELPYI-TWKQK---TFSND--DI--KDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHH-hccCc-EEEec---ccChh--cC--CCceEEEECCC
Confidence 4789999998 9999998888888999998874 44444555 44422 12211 11111 01 36899999999
Q ss_pred hhhHHHHHHhcccCCEEEEE
Q 042784 244 GKMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 244 ~~~~~~~~~~l~~~G~~v~~ 263 (356)
++..+......+..+.++.+
T Consensus 80 d~e~N~~i~~~a~~~~~vn~ 99 (157)
T PRK06719 80 QHAVNMMVKQAAHDFQWVNV 99 (157)
T ss_pred CHHHHHHHHHHHHHCCcEEE
Confidence 87666555544433444443
No 381
>PRK05855 short chain dehydrogenase; Validated
Probab=96.44 E-value=0.017 Score=57.10 Aligned_cols=81 Identities=21% Similarity=0.177 Sum_probs=55.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH---hCCC-c--eeecCChhhHHHHHHHHC--CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEE---FGYD-D--AFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
.+.++||+||+|++|...++.+...|++|+.++++.++.+.+.+. .|.. . ..|..+.....+.+.++. .+.+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 467899999999999999988888999999999988776654422 2332 1 134444333433333332 2469
Q ss_pred eEEEECCch
Q 042784 236 DVYLDNVGG 244 (356)
Q Consensus 236 d~vld~~g~ 244 (356)
|+++.+.|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999874
No 382
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.43 E-value=0.11 Score=40.09 Aligned_cols=93 Identities=14% Similarity=0.178 Sum_probs=57.6
Q ss_pred EEEEcCCChHHHHHHHHHHHCC--CEEEEEeCC--hHHHHHHHHHhCCCceeecCChhhHHHHHH---------------
Q 042784 168 VFVSAAAGGVGMFAGQLAKLKG--CKVVGSTGS--DDNVKLLKEEFGYDDAFNYNSEMSFDAALT--------------- 228 (356)
Q Consensus 168 VlV~g~~g~vG~~~i~la~~~G--~~V~~~~~s--~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~--------------- 228 (356)
|.|.|++|++|..++.+.+... ++|++.... -+.+....++|....+.-.+. ...+.++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~--~~~~~l~~~~~~~~~~~~v~~G 78 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADE--EAYEELKKALPSKGPGIEVLSG 78 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSH--HHHHHHHHHHHHTTSSSEEEES
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH--HHHHHHHHHhhhcCCCCEEEeC
Confidence 6799999999999999999987 588877632 233332223787766555442 2222221
Q ss_pred -----HHC-CCCceEEEECC-chhhHHHHHHhcccCCEEEE
Q 042784 229 -----KYF-PNGIDVYLDNV-GGKMLEAVLNHVNVHARIIL 262 (356)
Q Consensus 229 -----~~~-~~~~d~vld~~-g~~~~~~~~~~l~~~G~~v~ 262 (356)
++. ...+|+|+.++ |...+...+..++.+-++.+
T Consensus 79 ~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 79 PEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp HHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred hHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 221 14678888875 55677888888887766654
No 383
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.43 E-value=0.026 Score=48.71 Aligned_cols=70 Identities=21% Similarity=0.289 Sum_probs=50.6
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCEEEEEeCChH--HHHHHHHHhCCCce-eecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 168 VFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDD--NVKLLKEEFGYDDA-FNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 168 VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~--~~~~~~~~~g~~~v-~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
|+|+||+|.+|...++.+...+.+|.+.+++.. ....++ ..|+..+ .|+.+.+.+.+.+ .|+|.||.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~~~~~~l~~al-----~g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADYDDPESLVAAL-----KGVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-TT-HHHHHHHH-----TTCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh-cccceEeecccCCHHHHHHHH-----cCCceEEeecC
Confidence 799999999999999999888889999998753 345566 6787532 2344333343333 46999999888
No 384
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=96.42 E-value=0.06 Score=49.59 Aligned_cols=96 Identities=16% Similarity=0.160 Sum_probs=65.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHHC--CCEEEEEe--CChHHHHHHHHHhCCCceeecCChhhHHHHHHH------------
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLK--GCKVVGST--GSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTK------------ 229 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~--G~~V~~~~--~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~------------ 229 (356)
++|.|.|++|++|..++...+.. .++|++++ .+.++.....++|+...+...+. ...+.+++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~--~~~~~l~~~l~~~~~~v~~G 79 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADE--EAAKELKEALAAAGIEVLAG 79 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH--HHHHHHHHhhccCCceEEEC
Confidence 57999999999999999988765 56888876 34445555555888875554432 22222222
Q ss_pred ------HC-CCCceEEEECCch-hhHHHHHHhcccCCEEEEE
Q 042784 230 ------YF-PNGIDVYLDNVGG-KMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 230 ------~~-~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~ 263 (356)
+. ...+|+|+.++++ ..+...+.+++.+.++.+.
T Consensus 80 ~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA 121 (385)
T PRK05447 80 EEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA 121 (385)
T ss_pred hhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence 11 1358999999876 4777888899888877763
No 385
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.41 E-value=0.057 Score=48.10 Aligned_cols=46 Identities=20% Similarity=0.176 Sum_probs=39.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHh
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEF 209 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~ 209 (356)
..+.+++|.|+ ||.+.+++..+...|+ +|+++.++.+|.+.+.+.+
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~ 171 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence 34789999997 9999999988888998 8999999988877776454
No 386
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.40 E-value=0.033 Score=49.28 Aligned_cols=97 Identities=20% Similarity=0.203 Sum_probs=68.9
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhH
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 223 (356)
-+||+....+..+....---.|.+|+|.|.++-+|.-...++...|++|+..... . .++
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~--------------------t-~~l 195 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK--------------------T-RDL 195 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC--------------------C-CCH
Confidence 3455555555555433323469999999998888999999999999999874311 1 334
Q ss_pred HHHHHHHCCCCceEEEECCchhhHHHHHHhcccCCEEEEEeccc
Q 042784 224 DAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 224 ~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 267 (356)
.+.+++ +|+|+-++|.+.+-. -+.++++..++.+|...
T Consensus 196 ~~~~~~-----ADIVV~avG~~~~i~-~~~ik~gavVIDVGin~ 233 (285)
T PRK14189 196 AAHTRQ-----ADIVVAAVGKRNVLT-ADMVKPGATVIDVGMNR 233 (285)
T ss_pred HHHhhh-----CCEEEEcCCCcCccC-HHHcCCCCEEEEccccc
Confidence 444443 899999999874422 27899999999998754
No 387
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.40 E-value=0.034 Score=50.27 Aligned_cols=89 Identities=13% Similarity=0.061 Sum_probs=62.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
.|.+|.|.|. |.+|...++.++.+|++|++.+++.++.. +...+... .++.+.+. ..|+|+.+..
T Consensus 135 ~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~~~---~~l~e~l~-----~aDvvv~~lP 199 (312)
T PRK15469 135 EDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFAGR---EELSAFLS-----QTRVLINLLP 199 (312)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeeccc---ccHHHHHh-----cCCEEEECCC
Confidence 5789999996 99999999999999999999886543321 11111111 34444443 3799999887
Q ss_pred hh-----h-HHHHHHhcccCCEEEEEeccc
Q 042784 244 GK-----M-LEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 244 ~~-----~-~~~~~~~l~~~G~~v~~g~~~ 267 (356)
.. . -...++.|+++..+|.+|...
T Consensus 200 lt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 229 (312)
T PRK15469 200 NTPETVGIINQQLLEQLPDGAYLLNLARGV 229 (312)
T ss_pred CCHHHHHHhHHHHHhcCCCCcEEEECCCcc
Confidence 42 2 245788899999998887643
No 388
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=96.40 E-value=0.0091 Score=52.66 Aligned_cols=76 Identities=17% Similarity=0.255 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-ceeecCChhhHHHHHHHHC--CCCceEEEE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-DAFNYNSEMSFDAALTKYF--PNGIDVYLD 240 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~--~~~~d~vld 240 (356)
.+.+++|+|++|++|.++++.+...|++|+.+++++++.+. .... ...|..+..++.+.+.++. -+.+|+++.
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 83 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN 83 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 36899999999999999999999999999998876554321 1111 1234444344444444332 246999999
Q ss_pred CCc
Q 042784 241 NVG 243 (356)
Q Consensus 241 ~~g 243 (356)
+.|
T Consensus 84 ~Ag 86 (266)
T PRK06171 84 NAG 86 (266)
T ss_pred CCc
Confidence 887
No 389
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.39 E-value=0.035 Score=52.05 Aligned_cols=107 Identities=18% Similarity=0.215 Sum_probs=65.9
Q ss_pred CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHH------HHHHHh-CCC-ceeecCChhhHHHHHHHHC
Q 042784 160 GQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVK------LLKEEF-GYD-DAFNYNSEMSFDAALTKYF 231 (356)
Q Consensus 160 ~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~------~~~~~~-g~~-~v~~~~~~~~~~~~i~~~~ 231 (356)
.+-..+.+|||+||+|.+|..+++.+...|.+|++++++.++.. ...... +.. ...|..+...+.+.+.+.
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~- 133 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE- 133 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-
Confidence 34456789999999999999999988889999999998765421 111112 222 123555434444444432
Q ss_pred CCCceEEEECCchh-------------hHHHHHHhcccC--CEEEEEeccc
Q 042784 232 PNGIDVYLDNVGGK-------------MLEAVLNHVNVH--ARIILCGMIS 267 (356)
Q Consensus 232 ~~~~d~vld~~g~~-------------~~~~~~~~l~~~--G~~v~~g~~~ 267 (356)
+.++|+||+|.+.. ....+++.++.. +++|.++...
T Consensus 134 ~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~ 184 (390)
T PLN02657 134 GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAIC 184 (390)
T ss_pred CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecc
Confidence 12699999988631 112334444333 4788777543
No 390
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.03 Score=50.20 Aligned_cols=80 Identities=14% Similarity=0.200 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHH---HhCCCc---eeecCChhhHHHHHHHHC--CCC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDD-NVKLLKE---EFGYDD---AFNYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~-~~~~~~~---~~g~~~---v~~~~~~~~~~~~i~~~~--~~~ 234 (356)
.+.++||+|++|++|..++..+...|++|+.+.++.+ ..+.+.+ ..|... ..|..+...+.+.+.++. -++
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~ 124 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR 124 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999888888999998887643 2222221 223321 123333333333333321 146
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|++|.+.|
T Consensus 125 iD~lI~~Ag 133 (290)
T PRK06701 125 LDILVNNAA 133 (290)
T ss_pred CCEEEECCc
Confidence 899998876
No 391
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=96.34 E-value=0.028 Score=46.17 Aligned_cols=79 Identities=18% Similarity=0.233 Sum_probs=54.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC---Ccee--ecCChhhHHHHHHHHC--CCCceE
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGY---DDAF--NYNSEMSFDAALTKYF--PNGIDV 237 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~---~~v~--~~~~~~~~~~~i~~~~--~~~~d~ 237 (356)
...++|+|+++++|.+..+++...|++|.+.+...+..+.....+|. +..| |-++..+....+++.. -+.+++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 45678999999999999999999999999998776666555546665 2222 2233233322233221 137999
Q ss_pred EEECCc
Q 042784 238 YLDNVG 243 (356)
Q Consensus 238 vld~~g 243 (356)
+++|.|
T Consensus 94 lVncAG 99 (256)
T KOG1200|consen 94 LVNCAG 99 (256)
T ss_pred EEEcCc
Confidence 999999
No 392
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=96.32 E-value=0.017 Score=50.05 Aligned_cols=107 Identities=16% Similarity=0.190 Sum_probs=68.3
Q ss_pred HHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHH---hCCCceeecCChhhHH-HHHHH
Q 042784 156 IEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC--KVVGSTGSDDNVKLLKEE---FGYDDAFNYNSEMSFD-AALTK 229 (356)
Q Consensus 156 l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~--~V~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~-~~i~~ 229 (356)
+....++.||++|+=-| .|.|.++..+++..|- +|+..+.++++.+.+++. +|....+.... .|+. +...+
T Consensus 32 I~~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~-~Dv~~~g~~~ 108 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHH-RDVCEEGFDE 108 (247)
T ss_dssp HHHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEE-S-GGCG--ST
T ss_pred HHHHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEe-cceecccccc
Confidence 33468899999998877 5678888999998875 999999999998877653 45543332211 2221 11111
Q ss_pred HCCCCceEEEECCch--hhHHHHHHhc-ccCCEEEEEec
Q 042784 230 YFPNGIDVYLDNVGG--KMLEAVLNHV-NVHARIILCGM 265 (356)
Q Consensus 230 ~~~~~~d~vld~~g~--~~~~~~~~~l-~~~G~~v~~g~ 265 (356)
-....+|.||==... ..+..+.+.| +++|+++.+..
T Consensus 109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP 147 (247)
T PF08704_consen 109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP 147 (247)
T ss_dssp T-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred cccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence 012468988754444 4899999999 89999998754
No 393
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.28 E-value=0.12 Score=37.73 Aligned_cols=86 Identities=20% Similarity=0.191 Sum_probs=58.6
Q ss_pred EEEEEcCCChHHHHHHHHHHHCC---CEEEEE-eCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECC
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLKG---CKVVGS-TGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNV 242 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~G---~~V~~~-~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~ 242 (356)
+|.|.|+ |.+|.+.+.-+...| .+|+.+ .+++++.+.++++++..... .+..+.+++ .|+||-|+
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-----advvilav 69 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA-----DDNEEAAQE-----ADVVILAV 69 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES-----EEHHHHHHH-----TSEEEE-S
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc-----CChHHhhcc-----CCEEEEEE
Confidence 5778886 999999999988888 688855 89999998887677754222 123334443 79999999
Q ss_pred chhhHHHHHHh---cccCCEEEEE
Q 042784 243 GGKMLEAVLNH---VNVHARIILC 263 (356)
Q Consensus 243 g~~~~~~~~~~---l~~~G~~v~~ 263 (356)
-...+...++. ..++..++.+
T Consensus 70 ~p~~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 70 KPQQLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHHHhhccCCCEEEEe
Confidence 88655554443 4555555544
No 394
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.28 E-value=0.061 Score=47.55 Aligned_cols=97 Identities=15% Similarity=0.043 Sum_probs=68.3
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhH
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 223 (356)
-+||+....+..+....---.|.+|+|.|.+..+|.-...++...|++|++..... +++
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t---------------------~~l 194 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT---------------------KDL 194 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc---------------------HHH
Confidence 35666655665565332223699999999977999999999999999987653111 233
Q ss_pred HHHHHHHCCCCceEEEECCchhhHHHHHHhcccCCEEEEEeccc
Q 042784 224 DAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 224 ~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 267 (356)
.+.+++ +|+|+-++|.+.+-. -+.++++..++.+|...
T Consensus 195 ~~~~~~-----ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~~ 232 (285)
T PRK14191 195 SFYTQN-----ADIVCVGVGKPDLIK-ASMVKKGAVVVDIGINR 232 (285)
T ss_pred HHHHHh-----CCEEEEecCCCCcCC-HHHcCCCcEEEEeeccc
Confidence 344443 899999999875422 44679999999998743
No 395
>PRK01581 speE spermidine synthase; Validated
Probab=96.27 E-value=0.078 Score=48.49 Aligned_cols=97 Identities=11% Similarity=0.138 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhC--------C--CceeecCChhhHHHHHHHHC
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFG--------Y--DDAFNYNSEMSFDAALTKYF 231 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g--------~--~~v~~~~~~~~~~~~i~~~~ 231 (356)
....+|||.| ||.|.++..+++..+. +|++++.+++-.+.++ .+. + +.-+...- .|..+.+.. .
T Consensus 149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi-~Da~~fL~~-~ 223 (374)
T PRK01581 149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHV-CDAKEFLSS-P 223 (374)
T ss_pred CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCceEEEE-CcHHHHHHh-c
Confidence 4457999999 5677778888887665 9999999998888888 421 0 11111111 333444443 3
Q ss_pred CCCceEEEECCch------------hhHHHHHHhcccCCEEEEEe
Q 042784 232 PNGIDVYLDNVGG------------KMLEAVLNHVNVHARIILCG 264 (356)
Q Consensus 232 ~~~~d~vld~~g~------------~~~~~~~~~l~~~G~~v~~g 264 (356)
.+.+|+||--... +.+..+.+.|+++|.++.-.
T Consensus 224 ~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs 268 (374)
T PRK01581 224 SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS 268 (374)
T ss_pred CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 4579999743211 25678889999999987653
No 396
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=96.27 E-value=0.03 Score=49.41 Aligned_cols=78 Identities=18% Similarity=0.213 Sum_probs=48.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHhC----CC---ceeecCChhhH----HHHHHHHC--
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGS-DDNVKLLKEEFG----YD---DAFNYNSEMSF----DAALTKYF-- 231 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s-~~~~~~~~~~~g----~~---~v~~~~~~~~~----~~~i~~~~-- 231 (356)
.+++|+||++++|...++.+...|++|+++++. +++.+.+.+++. .. ...|..+...+ .+.+.+..
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 478999999999999999998999999987643 444443332332 11 11244432222 22222221
Q ss_pred CCCceEEEECCc
Q 042784 232 PNGIDVYLDNVG 243 (356)
Q Consensus 232 ~~~~d~vld~~g 243 (356)
-+++|+++.+.|
T Consensus 82 ~g~iD~lv~nAG 93 (267)
T TIGR02685 82 FGRCDVLVNNAS 93 (267)
T ss_pred cCCceEEEECCc
Confidence 246999999987
No 397
>PLN03139 formate dehydrogenase; Provisional
Probab=96.26 E-value=0.062 Score=49.92 Aligned_cols=91 Identities=23% Similarity=0.182 Sum_probs=64.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
.|.+|.|.|. |.+|...++.++.+|.+|++.+++....+..+ +.|+.. . .++.+.+.+ .|+|+-+..
T Consensus 198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~-~~g~~~----~--~~l~ell~~-----sDvV~l~lP 264 (386)
T PLN03139 198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK-ETGAKF----E--EDLDAMLPK-----CDVVVINTP 264 (386)
T ss_pred CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHh-hcCcee----c--CCHHHHHhh-----CCEEEEeCC
Confidence 5789999996 99999999999999999999887654444444 555431 1 234444433 799998776
Q ss_pred hh-----hH-HHHHHhcccCCEEEEEeccc
Q 042784 244 GK-----ML-EAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 244 ~~-----~~-~~~~~~l~~~G~~v~~g~~~ 267 (356)
.. .+ ...+..|+++..+|.++...
T Consensus 265 lt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 294 (386)
T PLN03139 265 LTEKTRGMFNKERIAKMKKGVLIVNNARGA 294 (386)
T ss_pred CCHHHHHHhCHHHHhhCCCCeEEEECCCCc
Confidence 31 22 35778899999888876543
No 398
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.26 E-value=0.21 Score=41.88 Aligned_cols=105 Identities=16% Similarity=0.193 Sum_probs=64.3
Q ss_pred HHhCCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHHHHHCC
Q 042784 157 EVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLK-GCKVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAALTKYFP 232 (356)
Q Consensus 157 ~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~-G~~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~ 232 (356)
....+++++++||=.| .|.|..++.+++.. +.+|++++.+++..+.+++ .++...+-... .+..+.+..+..
T Consensus 33 ~~~l~~~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~--~d~~~~~~~~~~ 108 (196)
T PRK07402 33 ISQLRLEPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE--GSAPECLAQLAP 108 (196)
T ss_pred HHhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE--CchHHHHhhCCC
Confidence 3455678889987777 45566777777665 4699999999988877764 34543221111 223222322222
Q ss_pred CCceEEEECCch--hhHHHHHHhcccCCEEEEEec
Q 042784 233 NGIDVYLDNVGG--KMLEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 233 ~~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g~ 265 (356)
..-+++++.... ..+..+.+.|+++|+++....
T Consensus 109 ~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 143 (196)
T PRK07402 109 APDRVCIEGGRPIKEILQAVWQYLKPGGRLVATAS 143 (196)
T ss_pred CCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence 222344543322 477888999999999887643
No 399
>PRK06123 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.052 Score=47.12 Aligned_cols=80 Identities=18% Similarity=0.201 Sum_probs=50.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe-CChHHHHHHHH---HhCCCc---eeecCChhhHHHHHHHHC--CCCc
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGST-GSDDNVKLLKE---EFGYDD---AFNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~-~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
+.++||+|++|++|...++.+...|++|+... +++++.+.+.+ ..+... ..|..+...+.+.+.++. .+.+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999888888899877665 34444333321 234321 124444344444444332 2468
Q ss_pred eEEEECCch
Q 042784 236 DVYLDNVGG 244 (356)
Q Consensus 236 d~vld~~g~ 244 (356)
|+++.+.|.
T Consensus 82 d~li~~ag~ 90 (248)
T PRK06123 82 DALVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998873
No 400
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.24 E-value=0.049 Score=46.50 Aligned_cols=100 Identities=19% Similarity=0.179 Sum_probs=65.2
Q ss_pred HhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHHHHHCC
Q 042784 158 VLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC--KVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAALTKYFP 232 (356)
Q Consensus 158 ~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~--~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~ 232 (356)
+...++++++||=.| .|.|..++.+++..+. +|++++.+++..+.+++ ++|.+.+.-.. .+..+... ..
T Consensus 71 ~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~--~d~~~~~~--~~ 144 (215)
T TIGR00080 71 ELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIV--GDGTQGWE--PL 144 (215)
T ss_pred HHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEE--CCcccCCc--cc
Confidence 456789999999998 5678888888888764 79999999887776654 33432211111 12211111 12
Q ss_pred CCceEEEECCch-hhHHHHHHhcccCCEEEEE
Q 042784 233 NGIDVYLDNVGG-KMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 233 ~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~ 263 (356)
..||+|+-.... .......+.|+++|+++..
T Consensus 145 ~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 145 APYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred CCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 469998855433 3556678899999998754
No 401
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=96.24 E-value=0.064 Score=47.32 Aligned_cols=107 Identities=13% Similarity=0.148 Sum_probs=69.4
Q ss_pred HHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCC
Q 042784 154 VGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPN 233 (356)
Q Consensus 154 ~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~ 233 (356)
..+....++.++.+||=.|+ | .|..+..+++..+++|++++.++...+.+++.+.....+.... .++.+ ..+..+
T Consensus 42 ~~~l~~l~l~~~~~VLDiGc-G-~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~-~D~~~--~~~~~~ 116 (263)
T PTZ00098 42 TKILSDIELNENSKVLDIGS-G-LGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEA-NDILK--KDFPEN 116 (263)
T ss_pred HHHHHhCCCCCCCEEEEEcC-C-CChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEE-CCccc--CCCCCC
Confidence 33444567899999999885 3 4666777787778899999999988888874433211111111 12110 011124
Q ss_pred CceEEEECC-----c--h--hhHHHHHHhcccCCEEEEEec
Q 042784 234 GIDVYLDNV-----G--G--KMLEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 234 ~~d~vld~~-----g--~--~~~~~~~~~l~~~G~~v~~g~ 265 (356)
.||+|+..- . . ..+..+.+.|+|+|.++....
T Consensus 117 ~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 117 TFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred CeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 699998621 2 1 267888899999999987654
No 402
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.22 E-value=0.029 Score=50.71 Aligned_cols=81 Identities=20% Similarity=0.211 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHH---HhCCCce---eecCChhhHHHHHHHHC-CCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSD-DNVKLLKE---EFGYDDA---FNYNSEMSFDAALTKYF-PNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~-~~~~~~~~---~~g~~~v---~~~~~~~~~~~~i~~~~-~~~~ 235 (356)
.|.+++|+|++|++|...++.+...|++|++.+++. ++.+.+.+ ..|.... .|..+.....+.+.+.. -+++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 478999999999999999988888899999887643 33322221 2243211 13333222322222211 2579
Q ss_pred eEEEECCch
Q 042784 236 DVYLDNVGG 244 (356)
Q Consensus 236 d~vld~~g~ 244 (356)
|++|.+.|.
T Consensus 91 D~li~nAG~ 99 (306)
T PRK07792 91 DIVVNNAGI 99 (306)
T ss_pred CEEEECCCC
Confidence 999998873
No 403
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.22 E-value=0.028 Score=47.27 Aligned_cols=98 Identities=11% Similarity=0.065 Sum_probs=62.5
Q ss_pred hCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH---hCCCceeecCChhhHHHHHHHHC-CCC
Q 042784 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEE---FGYDDAFNYNSEMSFDAALTKYF-PNG 234 (356)
Q Consensus 159 ~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~-~~~ 234 (356)
..+..++.+||-.|+ |.|..+..+++. |.+|++++.+++-.+.+++. .+... ++... .++ .+.. ++.
T Consensus 25 ~l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~-~d~----~~~~~~~~ 95 (197)
T PRK11207 25 AVKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAV-VDL----NNLTFDGE 95 (197)
T ss_pred hcccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEe-cCh----hhCCcCCC
Confidence 344566789999984 457788888875 88999999998877666532 22221 11111 122 1111 346
Q ss_pred ceEEEECCc-----h----hhHHHHHHhcccCCEEEEEec
Q 042784 235 IDVYLDNVG-----G----KMLEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 235 ~d~vld~~g-----~----~~~~~~~~~l~~~G~~v~~g~ 265 (356)
||+|+.+.. . ..+....+.|+|+|.++.+..
T Consensus 96 fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~~ 135 (197)
T PRK11207 96 YDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 135 (197)
T ss_pred cCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence 999997543 1 257788889999999765543
No 404
>PRK04457 spermidine synthase; Provisional
Probab=96.22 E-value=0.15 Score=44.99 Aligned_cols=96 Identities=10% Similarity=0.140 Sum_probs=65.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHhCCC---ceeecCChhhHHHHHHHHCCCCceEE
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKG-CKVVGSTGSDDNVKLLKEEFGYD---DAFNYNSEMSFDAALTKYFPNGIDVY 238 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G-~~V~~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~~~~~d~v 238 (356)
..+.+||+.|+ |.|..+..+++... .+|++++.+++-.+.+++.|+.. .-+.... .|..+.+.+. .+.+|+|
T Consensus 65 ~~~~~vL~IG~--G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~-~Da~~~l~~~-~~~yD~I 140 (262)
T PRK04457 65 PRPQHILQIGL--GGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE-ADGAEYIAVH-RHSTDVI 140 (262)
T ss_pred CCCCEEEEECC--CHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE-CCHHHHHHhC-CCCCCEE
Confidence 45688999994 45888888888774 59999999999999988655532 1111111 3444444432 3469999
Q ss_pred E-ECCc----------hhhHHHHHHhcccCCEEEE
Q 042784 239 L-DNVG----------GKMLEAVLNHVNVHARIIL 262 (356)
Q Consensus 239 l-d~~g----------~~~~~~~~~~l~~~G~~v~ 262 (356)
+ |... .+.+..+.+.|+++|.++.
T Consensus 141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi 175 (262)
T PRK04457 141 LVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV 175 (262)
T ss_pred EEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence 7 3321 2467888999999999886
No 405
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.20 E-value=0.031 Score=44.83 Aligned_cols=82 Identities=22% Similarity=0.220 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecC---ChhhHHHHHHHHCC--CCceE
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYN---SEMSFDAALTKYFP--NGIDV 237 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~---~~~~~~~~i~~~~~--~~~d~ 237 (356)
.+|-.-||+|+++++|.++...+...|+.|+..+-..++-+...+++|..-+|... ++++....+.+..+ +..|+
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 44667799999999999999999999999999887777666655599987666443 23566665555443 46999
Q ss_pred EEECCch
Q 042784 238 YLDNVGG 244 (356)
Q Consensus 238 vld~~g~ 244 (356)
.++|.|.
T Consensus 87 ~vncagi 93 (260)
T KOG1199|consen 87 LVNCAGI 93 (260)
T ss_pred eeeccce
Confidence 9999984
No 406
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=96.19 E-value=0.037 Score=48.00 Aligned_cols=79 Identities=15% Similarity=0.140 Sum_probs=51.2
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHH---HhCCC---ceeecCChhhHHHHHHHHC--CCCce
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGS-TGSDDNVKLLKE---EFGYD---DAFNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~-~~s~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
.+++|+|++|++|...+..+...|++|+++ .+++++.+.... ..+.. ...|..+..++.+.+.++. .+++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 479999999999999999888899998764 455554433321 22321 1234444344444444432 35799
Q ss_pred EEEECCch
Q 042784 237 VYLDNVGG 244 (356)
Q Consensus 237 ~vld~~g~ 244 (356)
+++.+.|.
T Consensus 82 ~vi~~ag~ 89 (247)
T PRK09730 82 ALVNNAGI 89 (247)
T ss_pred EEEECCCC
Confidence 99999874
No 407
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.19 E-value=0.046 Score=47.74 Aligned_cols=79 Identities=18% Similarity=0.235 Sum_probs=50.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHH---hCCC-c--eeecCChhhHHHHHHHHC--CCCce
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDD-NVKLLKEE---FGYD-D--AFNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~-~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
.+++|+|++|++|..++..+...|++|++++++.. ..+...+. .+.. . ..|..+..++.+.+.++. -+.+|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 57999999999999999988889999999886532 22222112 2321 1 234444344433333332 13699
Q ss_pred EEEECCch
Q 042784 237 VYLDNVGG 244 (356)
Q Consensus 237 ~vld~~g~ 244 (356)
+++.+.|.
T Consensus 83 ~vi~~ag~ 90 (256)
T PRK12745 83 CLVNNAGV 90 (256)
T ss_pred EEEECCcc
Confidence 99998863
No 408
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.19 E-value=0.041 Score=51.56 Aligned_cols=90 Identities=19% Similarity=0.200 Sum_probs=57.4
Q ss_pred EEEEcCCChHHHHHHHHHHHCC-C-EEEEEeCChHHHHHHHHHhC-CC---ceeecCChhhHHHHHHHHCCCCceEEEEC
Q 042784 168 VFVSAAAGGVGMFAGQLAKLKG-C-KVVGSTGSDDNVKLLKEEFG-YD---DAFNYNSEMSFDAALTKYFPNGIDVYLDN 241 (356)
Q Consensus 168 VlV~g~~g~vG~~~i~la~~~G-~-~V~~~~~s~~~~~~~~~~~g-~~---~v~~~~~~~~~~~~i~~~~~~~~d~vld~ 241 (356)
|+|+|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+++. .. ..+|..+..++.+.+ .+.|+||+|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~-----~~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELL-----RGCDVVINC 74 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHH-----TTSSEEEE-
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHH-----hcCCEEEEC
Confidence 789999 999999998888776 4 89999999999887764422 21 223444323333333 236999999
Q ss_pred Cchh-hHHHHHHhcccCCEEEEE
Q 042784 242 VGGK-MLEAVLNHVNVHARIILC 263 (356)
Q Consensus 242 ~g~~-~~~~~~~~l~~~G~~v~~ 263 (356)
+|.. ...-+..|++.+-+++..
T Consensus 75 ~gp~~~~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAGVHYVDT 97 (386)
T ss_dssp SSGGGHHHHHHHHHHHT-EEEES
T ss_pred CccchhHHHHHHHHHhCCCeecc
Confidence 9975 444445567778888874
No 409
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=96.18 E-value=0.032 Score=49.76 Aligned_cols=95 Identities=9% Similarity=0.112 Sum_probs=62.5
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-ceeecCChhhHHHHHHHHCC-CC-ceEEEECCc
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-DAFNYNSEMSFDAALTKYFP-NG-IDVYLDNVG 243 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~-~~-~d~vld~~g 243 (356)
+|+|+||+|.+|..+++.+...|.+|.+.++++++.. ..+.. ...|+.+...+.+.++.... .+ +|.++.+.+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~ 76 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP 76 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence 4899999999999999998889999999998876542 22332 23566664555555543221 35 999998776
Q ss_pred h-----hhHHHHHHhcccCC--EEEEEec
Q 042784 244 G-----KMLEAVLNHVNVHA--RIILCGM 265 (356)
Q Consensus 244 ~-----~~~~~~~~~l~~~G--~~v~~g~ 265 (356)
. ......++.++..| ++|.++.
T Consensus 77 ~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 77 PIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 3 12334445554444 6777654
No 410
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=96.18 E-value=0.024 Score=51.63 Aligned_cols=76 Identities=20% Similarity=0.316 Sum_probs=49.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CC---Ccee--ecCChhhHHHHHHHHCCCC
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GY---DDAF--NYNSEMSFDAALTKYFPNG 234 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~---~~v~--~~~~~~~~~~~i~~~~~~~ 234 (356)
..+.+|||+||+|.+|..++..+...|.+|++++++.++.+.....+ +. ...+ |..+..++.+.+ .+
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-----~~ 77 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAI-----DG 77 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHH-----cC
Confidence 34789999999999999999999889999988876655433222111 11 1112 333323333333 24
Q ss_pred ceEEEECCc
Q 042784 235 IDVYLDNVG 243 (356)
Q Consensus 235 ~d~vld~~g 243 (356)
+|+|+.++|
T Consensus 78 ~d~vih~A~ 86 (325)
T PLN02989 78 CETVFHTAS 86 (325)
T ss_pred CCEEEEeCC
Confidence 899999887
No 411
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=96.17 E-value=0.61 Score=40.72 Aligned_cols=95 Identities=13% Similarity=0.152 Sum_probs=62.1
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEEC
Q 042784 162 PKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDN 241 (356)
Q Consensus 162 ~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~ 241 (356)
..++.+||-.|+ |. |..+..+++ .|.+|++++.+++..+.+++.......+. .++.+ + .+..+.||+|+..
T Consensus 40 ~~~~~~vLDiGc-G~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~----~d~~~-~-~~~~~~fD~V~s~ 110 (251)
T PRK10258 40 QRKFTHVLDAGC-GP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLA----GDIES-L-PLATATFDLAWSN 110 (251)
T ss_pred ccCCCeEEEeeC-CC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEE----cCccc-C-cCCCCcEEEEEEC
Confidence 346788999985 43 666655554 58899999999999998884332222221 11111 1 1123469999975
Q ss_pred Cch-------hhHHHHHHhcccCCEEEEEec
Q 042784 242 VGG-------KMLEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 242 ~g~-------~~~~~~~~~l~~~G~~v~~g~ 265 (356)
..- ..+.++.+.|+++|.++....
T Consensus 111 ~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~ 141 (251)
T PRK10258 111 LAVQWCGNLSTALRELYRVVRPGGVVAFTTL 141 (251)
T ss_pred chhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 432 267888999999999886543
No 412
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=96.16 E-value=0.092 Score=45.68 Aligned_cols=101 Identities=13% Similarity=0.030 Sum_probs=70.4
Q ss_pred hCCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHHHHHC--
Q 042784 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLK--GCKVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAALTKYF-- 231 (356)
Q Consensus 159 ~~~~~~g~~VlV~g~~g~vG~~~i~la~~~--G~~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~-- 231 (356)
..+....++||=.| ..+|+.++.+|+.+ +.+|+.++..++..+.+++ ..|...-++... .+..+.+.++.
T Consensus 74 l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~-G~a~e~L~~l~~~ 150 (247)
T PLN02589 74 LLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE-GPALPVLDQMIED 150 (247)
T ss_pred HHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe-ccHHHHHHHHHhc
Confidence 34555678999999 68899999999887 4599999998887777654 345444444433 44555555543
Q ss_pred ---CCCceEEEE-CCch---hhHHHHHHhcccCCEEEE
Q 042784 232 ---PNGIDVYLD-NVGG---KMLEAVLNHVNVHARIIL 262 (356)
Q Consensus 232 ---~~~~d~vld-~~g~---~~~~~~~~~l~~~G~~v~ 262 (356)
.+.||.||- +--. ..++.++++|+++|.++.
T Consensus 151 ~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 151 GKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred cccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 147999974 4332 367888999999998774
No 413
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=96.16 E-value=0.017 Score=48.80 Aligned_cols=104 Identities=17% Similarity=0.093 Sum_probs=70.6
Q ss_pred hCCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHHHHHC--
Q 042784 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLK--GCKVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAALTKYF-- 231 (356)
Q Consensus 159 ~~~~~~g~~VlV~g~~g~vG~~~i~la~~~--G~~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~-- 231 (356)
..+.....+||-.| +.+|+.++.+|+.+ +.+|+.++.++++.+.+++ ..|....+.... .+..+.+.++.
T Consensus 40 l~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~-gda~~~l~~l~~~ 116 (205)
T PF01596_consen 40 LVRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIE-GDALEVLPELAND 116 (205)
T ss_dssp HHHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE-S-HHHHHHHHHHT
T ss_pred HHHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE-eccHhhHHHHHhc
Confidence 34445668999999 67899999999887 4699999999988877764 345433333332 34444444442
Q ss_pred --CCCceEEE-ECCch---hhHHHHHHhcccCCEEEEEec
Q 042784 232 --PNGIDVYL-DNVGG---KMLEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 232 --~~~~d~vl-d~~g~---~~~~~~~~~l~~~G~~v~~g~ 265 (356)
.+.||.|| |+--. ..+..++++|+++|.++.=..
T Consensus 117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN~ 156 (205)
T PF01596_consen 117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADNV 156 (205)
T ss_dssp TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEETT
T ss_pred cCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEccc
Confidence 24699996 55443 367889999999998885443
No 414
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=96.16 E-value=0.047 Score=47.40 Aligned_cols=80 Identities=21% Similarity=0.231 Sum_probs=50.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHH---HhCCC-ce--eecCChhhHHHHHHHHC--CCCc
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTG-SDDNVKLLKE---EFGYD-DA--FNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~-s~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
+.+++|+|++|++|...+..+...|++|+++.+ ++++.+.+.+ ..+.. .. .|..+...+.+.+.+.. -+.+
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKV 85 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999888888998877653 3444333321 22322 11 23333333444333332 1358
Q ss_pred eEEEECCch
Q 042784 236 DVYLDNVGG 244 (356)
Q Consensus 236 d~vld~~g~ 244 (356)
|+++.+.|.
T Consensus 86 d~vi~~ag~ 94 (247)
T PRK12935 86 DILVNNAGI 94 (247)
T ss_pred CEEEECCCC
Confidence 999998874
No 415
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=96.15 E-value=0.02 Score=48.19 Aligned_cols=103 Identities=21% Similarity=0.295 Sum_probs=70.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC----cee----ecCChhhHHHHHHHHC--CCC
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD----DAF----NYNSEMSFDAALTKYF--PNG 234 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~----~v~----~~~~~~~~~~~i~~~~--~~~ 234 (356)
|++++++|++||+|+.....+...|+++.++..+.|+.+... +|.+. .++ |-.+..++....++.. -+.
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 899999999999999999999999999999998998877766 66542 121 1122244555555432 257
Q ss_pred ceEEEECCch---hhH---------------HHHHHh-----cccCCEEEEEecccc
Q 042784 235 IDVYLDNVGG---KML---------------EAVLNH-----VNVHARIILCGMISQ 268 (356)
Q Consensus 235 ~d~vld~~g~---~~~---------------~~~~~~-----l~~~G~~v~~g~~~~ 268 (356)
+|++|+..|- ..+ ..++.. -.++|.+|.+++..+
T Consensus 84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~G 140 (261)
T KOG4169|consen 84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAG 140 (261)
T ss_pred eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccc
Confidence 9999998873 111 112222 247789999887655
No 416
>PRK07574 formate dehydrogenase; Provisional
Probab=96.15 E-value=0.08 Score=49.23 Aligned_cols=91 Identities=18% Similarity=0.141 Sum_probs=64.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
.|.+|.|.|. |.+|...++.++.+|.+|++.+++....+..+ .+|... + .++.+.+. ..|+|+-+..
T Consensus 191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~-~~g~~~---~---~~l~ell~-----~aDvV~l~lP 257 (385)
T PRK07574 191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ-ELGLTY---H---VSFDSLVS-----VCDVVTIHCP 257 (385)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHh-hcCcee---c---CCHHHHhh-----cCCEEEEcCC
Confidence 4679999996 99999999999999999999997754334333 455321 1 23444443 3899998876
Q ss_pred hh-----hH-HHHHHhcccCCEEEEEeccc
Q 042784 244 GK-----ML-EAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 244 ~~-----~~-~~~~~~l~~~G~~v~~g~~~ 267 (356)
.. .+ ...+..|+++..+|.++...
T Consensus 258 lt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 287 (385)
T PRK07574 258 LHPETEHLFDADVLSRMKRGSYLVNTARGK 287 (385)
T ss_pred CCHHHHHHhCHHHHhcCCCCcEEEECCCCc
Confidence 41 22 35678899999888876543
No 417
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.12 E-value=0.011 Score=43.95 Aligned_cols=88 Identities=17% Similarity=0.199 Sum_probs=57.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
.|.+|||.|+ |.+|..-++.+...|++|++++... +..+ +.-... . ..+.+. + .++|+|+.+++
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~i~~~-~---~~~~~~---l--~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE---GLIQLI-R---REFEED---L--DGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TSCEEE-E---SS-GGG---C--TTESEEEE-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh---hHHHHH-h---hhHHHH---H--hhheEEEecCC
Confidence 4789999998 9999999999999999999998665 2222 221111 1 223111 1 46999999999
Q ss_pred hhhHH-HHHHhcccCCEEEEEeccc
Q 042784 244 GKMLE-AVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 244 ~~~~~-~~~~~l~~~G~~v~~g~~~ 267 (356)
.+.++ ...+..+..|..+.+.+..
T Consensus 70 d~~~n~~i~~~a~~~~i~vn~~D~p 94 (103)
T PF13241_consen 70 DPELNEAIYADARARGILVNVVDDP 94 (103)
T ss_dssp -HHHHHHHHHHHHHTTSEEEETT-C
T ss_pred CHHHHHHHHHHHhhCCEEEEECCCc
Confidence 87554 4455567789888876543
No 418
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.11 E-value=0.03 Score=50.94 Aligned_cols=75 Identities=23% Similarity=0.304 Sum_probs=48.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CC--C-ce--eecCChhhHHHHHHHHCCCCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GY--D-DA--FNYNSEMSFDAALTKYFPNGI 235 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~--~-~v--~~~~~~~~~~~~i~~~~~~~~ 235 (356)
.|.+|||+||+|.+|..++..+...|.+|+++.++.++.+.+.+.+ +. . .. .|..+...+.+.+ .++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~~ 78 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAI-----EGC 78 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHH-----hCC
Confidence 4789999999999999999888888999998887765433322111 11 1 11 1233222333333 248
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|+||.+.+
T Consensus 79 d~vih~A~ 86 (322)
T PLN02986 79 DAVFHTAS 86 (322)
T ss_pred CEEEEeCC
Confidence 99999876
No 419
>PLN03075 nicotianamine synthase; Provisional
Probab=96.10 E-value=0.059 Score=47.96 Aligned_cols=96 Identities=13% Similarity=0.073 Sum_probs=65.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHhCC----CceeecCChhhHHHHHHHHCCCCceE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLK--GCKVVGSTGSDDNVKLLKEEFGY----DDAFNYNSEMSFDAALTKYFPNGIDV 237 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~--G~~V~~~~~s~~~~~~~~~~~g~----~~v~~~~~~~~~~~~i~~~~~~~~d~ 237 (356)
++++|+-.| +|+.++.++-+++.. +.+++.++.+++..+.+++.+.. ..-+.+.. .+..+.... .++||+
T Consensus 123 ~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~-~Da~~~~~~--l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT-ADVMDVTES--LKEYDV 198 (296)
T ss_pred CCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE-Cchhhcccc--cCCcCE
Confidence 779999999 499999888888655 34899999999998888854422 12222221 222221101 246999
Q ss_pred EEECC------ch--hhHHHHHHhcccCCEEEEE
Q 042784 238 YLDNV------GG--KMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 238 vld~~------g~--~~~~~~~~~l~~~G~~v~~ 263 (356)
|+..+ .. ..+....+.|+|+|.++.-
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr 232 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLR 232 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCCcEEEEe
Confidence 98764 22 2788999999999998843
No 420
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.10 E-value=0.079 Score=48.46 Aligned_cols=89 Identities=19% Similarity=0.187 Sum_probs=63.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
.|++|.|.|. |.+|...++.++..|.+|++.+++.+.. ... .+|.. + .++.+.+.+ .|+|+-++.
T Consensus 149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~----~---~~l~ell~~-----aDiV~l~lP 213 (333)
T PRK13243 149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE-AEK-ELGAE----Y---RPLEELLRE-----SDFVSLHVP 213 (333)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hHH-HcCCE----e---cCHHHHHhh-----CCEEEEeCC
Confidence 5789999997 9999999999999999999998765433 222 44432 1 234444433 799998876
Q ss_pred hh-----hH-HHHHHhcccCCEEEEEeccc
Q 042784 244 GK-----ML-EAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 244 ~~-----~~-~~~~~~l~~~G~~v~~g~~~ 267 (356)
.. .+ ...+..++++..++.++...
T Consensus 214 ~t~~T~~~i~~~~~~~mk~ga~lIN~aRg~ 243 (333)
T PRK13243 214 LTKETYHMINEERLKLMKPTAILVNTARGK 243 (333)
T ss_pred CChHHhhccCHHHHhcCCCCeEEEECcCch
Confidence 42 22 46778899999888886543
No 421
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.10 E-value=0.096 Score=44.64 Aligned_cols=102 Identities=17% Similarity=0.209 Sum_probs=57.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChH-----HHHH--HHHHhCCCce---------------eecCCh
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDD-----NVKL--LKEEFGYDDA---------------FNYNSE 220 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~-----~~~~--~~~~~g~~~v---------------~~~~~~ 220 (356)
+.++|+|.|. ||||-+++..+-..|+ ++..++..+- +++. +....|-..+ ++..+.
T Consensus 29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~ 107 (263)
T COG1179 29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND 107 (263)
T ss_pred hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence 3578999997 9999999999999999 8877764321 1111 1001111100 111110
Q ss_pred hhHHHHHHHHCCCCceEEEECCchh--hHHHHHHhcccCCEEEEEecc
Q 042784 221 MSFDAALTKYFPNGIDVYLDNVGGK--MLEAVLNHVNVHARIILCGMI 266 (356)
Q Consensus 221 ~~~~~~i~~~~~~~~d~vld~~g~~--~~~~~~~~l~~~G~~v~~g~~ 266 (356)
---.+.+.++..+++|+|+||...- -...+..|.+..=.++..+..
T Consensus 108 f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Ga 155 (263)
T COG1179 108 FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGA 155 (263)
T ss_pred hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccc
Confidence 1112234455567899999999873 222333345555555555443
No 422
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.10 E-value=0.064 Score=48.51 Aligned_cols=89 Identities=20% Similarity=0.237 Sum_probs=61.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGC--KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~--~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
.+|.|.|+ |.+|.+.+..++..|. +|++.++++++.+.++ +.|...... .+..+.+ ..+|+||.|+.
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~----~~~~~~~-----~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVT----TSAAEAV-----KGADLVILCVP 75 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceec----CCHHHHh-----cCCCEEEECCC
Confidence 67999996 9999999888888885 8999999998888887 677531111 1222222 34899999998
Q ss_pred hhh----HHHHHHhcccCCEEEEEec
Q 042784 244 GKM----LEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 244 ~~~----~~~~~~~l~~~G~~v~~g~ 265 (356)
... +......++++..++.+|.
T Consensus 76 ~~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 653 3333345667776666654
No 423
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.042 Score=48.14 Aligned_cols=81 Identities=14% Similarity=0.176 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCh----HHHHHHHH---HhCCCc---eeecCChhhHHHHHHHHC--
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSD----DNVKLLKE---EFGYDD---AFNYNSEMSFDAALTKYF-- 231 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~----~~~~~~~~---~~g~~~---v~~~~~~~~~~~~i~~~~-- 231 (356)
.+.+++|+|++|++|.++++.+...|++|++++++. ++.+.+.+ ..+... ..|..+..++.+.+.+..
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 367999999999999999998888999876665332 22222221 234321 234444344443333322
Q ss_pred CCCceEEEECCch
Q 042784 232 PNGIDVYLDNVGG 244 (356)
Q Consensus 232 ~~~~d~vld~~g~ 244 (356)
.+++|++|.+.|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 2469999998873
No 424
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.08 E-value=0.068 Score=42.09 Aligned_cols=97 Identities=16% Similarity=0.116 Sum_probs=67.5
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhH
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 223 (356)
.+++.....+..+....---.|.+|+|+|.+..+|.-++.++...|++|+...... .++
T Consensus 7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t---------------------~~l 65 (140)
T cd05212 7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT---------------------IQL 65 (140)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC---------------------cCH
Confidence 34555555555555433335699999999999999999999999999998876321 123
Q ss_pred HHHHHHHCCCCceEEEECCchhhHHHHHHhcccCCEEEEEeccc
Q 042784 224 DAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 224 ~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 267 (356)
.+.+++ +|+|+-++|...+ ---+.++++..++.+|...
T Consensus 66 ~~~v~~-----ADIVvsAtg~~~~-i~~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 66 QSKVHD-----ADVVVVGSPKPEK-VPTEWIKPGATVINCSPTK 103 (140)
T ss_pred HHHHhh-----CCEEEEecCCCCc-cCHHHcCCCCEEEEcCCCc
Confidence 333433 8999999998632 2245689999988777643
No 425
>PRK07041 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.04 Score=47.29 Aligned_cols=74 Identities=16% Similarity=0.265 Sum_probs=51.5
Q ss_pred EEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--CCC-ce--eecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 169 FVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF--GYD-DA--FNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 169 lV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~--g~~-~v--~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
+|+|++|++|...++.+...|++|+++++++++.+.+.+.+ +.. ++ .|..+..++.+.+.+. +.+|.++.+.|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence 58999999999999888889999999998877665554333 221 12 2444434444444433 46899999887
Q ss_pred h
Q 042784 244 G 244 (356)
Q Consensus 244 ~ 244 (356)
.
T Consensus 79 ~ 79 (230)
T PRK07041 79 D 79 (230)
T ss_pred C
Confidence 3
No 426
>PRK07578 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.085 Score=44.20 Aligned_cols=63 Identities=19% Similarity=0.261 Sum_probs=43.2
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
+++|+|++|++|.+.+..+... .+|+.++++.. ....|..+..++.+.+.++ +++|+++.+.|
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~id~lv~~ag 64 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKV--GKVDAVVSAAG 64 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhc--CCCCEEEECCC
Confidence 6899999999999887766666 89999886543 1124544433444444333 46899998887
No 427
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=96.05 E-value=0.66 Score=41.01 Aligned_cols=156 Identities=13% Similarity=0.155 Sum_probs=85.0
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchh-
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGK- 245 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~- 245 (356)
++||+|++|.+|....+.+. -+.+|+++++.+ +|..+...+.+.+++. ..|+||+|..-.
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~---~PDvVIn~AAyt~ 62 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEFEVIATDRAE---------------LDITDPDAVLEVIRET---RPDVVINAAAYTA 62 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------ccccChHHHHHHHHhh---CCCEEEECccccc
Confidence 38999999999998888887 556999987553 2333323455555543 478998877621
Q ss_pred ------------------hHHHHHHhcccCCEEEEEec---ccccccccccccchhhhhhh---------------hccc
Q 042784 246 ------------------MLEAVLNHVNVHARIILCGM---ISQYNKVWTERDGVRNLLNM---------------IGKE 289 (356)
Q Consensus 246 ------------------~~~~~~~~l~~~G~~v~~g~---~~~~~~~~~~~~~~~~~~~~---------------~~~~ 289 (356)
..+-+..+-+-+..+|.++. ..+.....+.+.....+... ..+.
T Consensus 63 vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~~~~ 142 (281)
T COG1091 63 VDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRH 142 (281)
T ss_pred cccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhCCCE
Confidence 11112223344566776652 22322221222222222211 1344
Q ss_pred eEEEEEecccccchHHHHHHHHHHHHHcCC-eeeeeeEE---eChhhHHHHHHHHHcC
Q 042784 290 VKMEGFMIGSHMDRFADFTVEMESYIKEGK-IRSKHVIY---YGVESFLESLGSLFSS 343 (356)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~-i~~~~~~~---~~~~~~~~a~~~~~~~ 343 (356)
+.++.+++..... ......++++..+|. ++..-+.. ..-.++.++...+...
T Consensus 143 ~I~Rtswv~g~~g--~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~ 198 (281)
T COG1091 143 LILRTSWVYGEYG--NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEK 198 (281)
T ss_pred EEEEeeeeecCCC--CCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhc
Confidence 5556665544322 245667778888873 44333332 3467777777764433
No 428
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.04 E-value=0.075 Score=47.25 Aligned_cols=79 Identities=13% Similarity=0.133 Sum_probs=56.8
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEEC
Q 042784 162 PKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDN 241 (356)
Q Consensus 162 ~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~ 241 (356)
--.|.+|+|.|.+|-+|...+.++...|++|++..+. . .++.+.+ ..+|+|+.+
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~---t------------------~~L~~~~-----~~aDIvI~A 209 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR---T------------------QNLPELV-----KQADIIVGA 209 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC---c------------------hhHHHHh-----ccCCEEEEc
Confidence 3578999999984459999999999999977766531 1 2222223 348999999
Q ss_pred CchhhHHHHHHhcccCCEEEEEeccc
Q 042784 242 VGGKMLEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 242 ~g~~~~~~~~~~l~~~G~~v~~g~~~ 267 (356)
+|.+.+ --...++++..++.+|...
T Consensus 210 tG~~~~-v~~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 210 VGKPEL-IKKDWIKQGAVVVDAGFHP 234 (283)
T ss_pred cCCCCc-CCHHHcCCCCEEEEEEEee
Confidence 987532 2235689999999998754
No 429
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.04 E-value=0.081 Score=45.04 Aligned_cols=99 Identities=24% Similarity=0.236 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCce--------------eecCChhhHHHHHH
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDA--------------FNYNSEMSFDAALT 228 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v--------------~~~~~~~~~~~~i~ 228 (356)
.++.+||+.|. |.|.-++-+|. .|.+|++++.|+.-.+.+.++.+.... ++... .|+.+ +.
T Consensus 33 ~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~D~~~-~~ 107 (213)
T TIGR03840 33 PAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFC-GDFFA-LT 107 (213)
T ss_pred CCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEE-ccCCC-CC
Confidence 57789999994 56787888875 699999999999988876434443210 00000 11111 00
Q ss_pred HHCCCCceEEEECCch---------hhHHHHHHhcccCCEEEEEecc
Q 042784 229 KYFPNGIDVYLDNVGG---------KMLEAVLNHVNVHARIILCGMI 266 (356)
Q Consensus 229 ~~~~~~~d~vld~~g~---------~~~~~~~~~l~~~G~~v~~g~~ 266 (356)
....+.||.|+|+.-- ..+....++|+|+|+++.++..
T Consensus 108 ~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~ 154 (213)
T TIGR03840 108 AADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD 154 (213)
T ss_pred cccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence 0001358999996531 2677888999999987766553
No 430
>PLN00203 glutamyl-tRNA reductase
Probab=96.03 E-value=0.12 Score=49.92 Aligned_cols=74 Identities=27% Similarity=0.351 Sum_probs=53.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
+.+|+|.|+ |.+|.+++..+...|+ +|+++.++.++.+.+.++++... +.+....+..+.+ ..+|+||.|++
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~-i~~~~~~dl~~al-----~~aDVVIsAT~ 338 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVE-IIYKPLDEMLACA-----AEADVVFTSTS 338 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCc-eEeecHhhHHHHH-----hcCCEEEEccC
Confidence 789999997 9999999999999998 89999999998887775664221 1111112233333 35899999987
Q ss_pred hh
Q 042784 244 GK 245 (356)
Q Consensus 244 ~~ 245 (356)
..
T Consensus 339 s~ 340 (519)
T PLN00203 339 SE 340 (519)
T ss_pred CC
Confidence 64
No 431
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.03 E-value=0.05 Score=50.13 Aligned_cols=81 Identities=15% Similarity=0.137 Sum_probs=49.8
Q ss_pred CCCCEEEEEcCCChHHHH--HHHHHHHCCCEEEEEeCCh--HH--------------HHHHHHHhCCC-cee--ecCChh
Q 042784 163 KSGSNVFVSAAAGGVGMF--AGQLAKLKGCKVVGSTGSD--DN--------------VKLLKEEFGYD-DAF--NYNSEM 221 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~--~i~la~~~G~~V~~~~~s~--~~--------------~~~~~~~~g~~-~v~--~~~~~~ 221 (356)
..++++||+|+++++|++ +++.+ ..|++|+++.... .+ .+.++ +.|.. ..+ |..+..
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCCceEEEEcCCCCHH
Confidence 456899999999999999 45555 8899888776321 11 22333 55653 222 333323
Q ss_pred hHHHHHHHHC--CCCceEEEECCchh
Q 042784 222 SFDAALTKYF--PNGIDVYLDNVGGK 245 (356)
Q Consensus 222 ~~~~~i~~~~--~~~~d~vld~~g~~ 245 (356)
...+.+.++. -+++|+++.+++..
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 3333333322 24699999998864
No 432
>PRK12827 short chain dehydrogenase; Provisional
Probab=96.02 E-value=0.052 Score=47.08 Aligned_cols=80 Identities=18% Similarity=0.209 Sum_probs=49.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC----ChHHHHHHHHH---hCCC-ce--eecCChhhHHHHHHHHC--C
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTG----SDDNVKLLKEE---FGYD-DA--FNYNSEMSFDAALTKYF--P 232 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~----s~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~i~~~~--~ 232 (356)
+.+++|+|++|++|...+..+...|++|+.+++ +.++.+.+.++ .+.. .+ .|..+...+...+.++. .
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEF 85 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 578999999999999999888889999888654 23333333222 2322 11 23343333433333322 2
Q ss_pred CCceEEEECCch
Q 042784 233 NGIDVYLDNVGG 244 (356)
Q Consensus 233 ~~~d~vld~~g~ 244 (356)
+++|.+|.+.|.
T Consensus 86 ~~~d~vi~~ag~ 97 (249)
T PRK12827 86 GRLDILVNNAGI 97 (249)
T ss_pred CCCCEEEECCCC
Confidence 469999998873
No 433
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.02 E-value=0.051 Score=47.20 Aligned_cols=78 Identities=18% Similarity=0.169 Sum_probs=48.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEe-CChHHHHHHHH---HhCCC-ce--eecCChhhHHHHHHHHC--CCCce
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGST-GSDDNVKLLKE---EFGYD-DA--FNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~-~s~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
.+++|+|++|++|..+++.+...|++|+.+. +++++.+.+.+ ..+.. .. .|..+..++.+.+.++. -+.+|
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD 82 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 5799999999999999988888899887664 44444333321 22322 11 23333334444333322 24699
Q ss_pred EEEECCc
Q 042784 237 VYLDNVG 243 (356)
Q Consensus 237 ~vld~~g 243 (356)
++|.+.|
T Consensus 83 ~li~~ag 89 (248)
T PRK06947 83 ALVNNAG 89 (248)
T ss_pred EEEECCc
Confidence 9999887
No 434
>PRK07023 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.05 Score=47.16 Aligned_cols=75 Identities=17% Similarity=0.224 Sum_probs=48.5
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC---ceeecCChhhHHHHHHH-----HC-CCCceE
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD---DAFNYNSEMSFDAALTK-----YF-PNGIDV 237 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~-----~~-~~~~d~ 237 (356)
++||+|++|++|..+++.+...|++|++++++.++. ... ..+.. ...|..+..++.+.+.+ +. .+..|.
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~-~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS-LAA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh-hhh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 799999999999999988888899999998775542 222 33432 12344443334332222 11 236888
Q ss_pred EEECCc
Q 042784 238 YLDNVG 243 (356)
Q Consensus 238 vld~~g 243 (356)
++.+.|
T Consensus 81 ~v~~ag 86 (243)
T PRK07023 81 LINNAG 86 (243)
T ss_pred EEEcCc
Confidence 988876
No 435
>PLN02928 oxidoreductase family protein
Probab=95.95 E-value=0.11 Score=47.76 Aligned_cols=95 Identities=14% Similarity=0.086 Sum_probs=62.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC-----Cceee-cCChhhHHHHHHHHCCCCceE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGY-----DDAFN-YNSEMSFDAALTKYFPNGIDV 237 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~-----~~v~~-~~~~~~~~~~i~~~~~~~~d~ 237 (356)
.|.++.|.|. |.+|..+++.++.+|++|++.+++..+.... .++. ....+ .....++.+.+.+ .|+
T Consensus 158 ~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~ell~~-----aDi 229 (347)
T PLN02928 158 FGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPED--GLLIPNGDVDDLVDEKGGHEDIYEFAGE-----ADI 229 (347)
T ss_pred CCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhh--hhccccccccccccccCcccCHHHHHhh-----CCE
Confidence 4789999996 9999999999999999999998763321111 1110 00010 0011345555543 799
Q ss_pred EEECCchh------hHHHHHHhcccCCEEEEEecc
Q 042784 238 YLDNVGGK------MLEAVLNHVNVHARIILCGMI 266 (356)
Q Consensus 238 vld~~g~~------~~~~~~~~l~~~G~~v~~g~~ 266 (356)
|+-++... .-...+..|+++..+|.++..
T Consensus 230 Vvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG 264 (347)
T PLN02928 230 VVLCCTLTKETAGIVNDEFLSSMKKGALLVNIARG 264 (347)
T ss_pred EEECCCCChHhhcccCHHHHhcCCCCeEEEECCCc
Confidence 99887631 225678899999999988754
No 436
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=95.95 E-value=0.079 Score=45.82 Aligned_cols=78 Identities=21% Similarity=0.276 Sum_probs=49.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHhC---CC-c--eeecCChhhHHHHHHHHC--CCCce
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDD-NVKLLKEEFG---YD-D--AFNYNSEMSFDAALTKYF--PNGID 236 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~-~~~~~~~~~g---~~-~--v~~~~~~~~~~~~i~~~~--~~~~d 236 (356)
.+++|+|++|++|..+++.+...|++|++++++.. ........++ .. . ..|..+..++.+.+.++. -+.+|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999999888888999999987743 1111211222 11 1 124444334444343322 24699
Q ss_pred EEEECCc
Q 042784 237 VYLDNVG 243 (356)
Q Consensus 237 ~vld~~g 243 (356)
+++.+.|
T Consensus 83 ~vi~~ag 89 (245)
T PRK12824 83 ILVNNAG 89 (245)
T ss_pred EEEECCC
Confidence 9999887
No 437
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=95.94 E-value=0.085 Score=47.15 Aligned_cols=77 Identities=13% Similarity=0.197 Sum_probs=47.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCCh---HHHHHHHHHhCCC--ceeecCChhhHHHHHHHHCCCCceE
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSD---DNVKLLKEEFGYD--DAFNYNSEMSFDAALTKYFPNGIDV 237 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~---~~~~~~~~~~g~~--~v~~~~~~~~~~~~i~~~~~~~~d~ 237 (356)
.+.+++|.|+ ||.+.+++..+...|+ +|+++.|++ ++.+.+.+.++.. ..+......+ .+.+.+. -..+|+
T Consensus 123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~-~~~l~~~-~~~aDi 199 (288)
T PRK12749 123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD-QQAFAEA-LASADI 199 (288)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhh-hhhhhhh-cccCCE
Confidence 5689999997 9999987777777898 899999884 3555554455431 0111111011 1112111 135899
Q ss_pred EEECCc
Q 042784 238 YLDNVG 243 (356)
Q Consensus 238 vld~~g 243 (356)
|++|+.
T Consensus 200 vINaTp 205 (288)
T PRK12749 200 LTNGTK 205 (288)
T ss_pred EEECCC
Confidence 999875
No 438
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.94 E-value=0.14 Score=44.96 Aligned_cols=97 Identities=19% Similarity=0.225 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCceeecCChhhHHHHHHHHCCCCceEEE
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF---GYDDAFNYNSEMSFDAALTKYFPNGIDVYL 239 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~i~~~~~~~~d~vl 239 (356)
.++.+||=.| +|.|..+..+++. |.+|++++.+++..+.+++.. |...-+.... .+..+ +.....+.||+|+
T Consensus 43 ~~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~-~d~~~-l~~~~~~~fD~V~ 117 (255)
T PRK11036 43 PRPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH-CAAQD-IAQHLETPVDLIL 117 (255)
T ss_pred CCCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEE-cCHHH-HhhhcCCCCCEEE
Confidence 4567888888 5678888888875 889999999999888877432 2211111110 12221 2222235799998
Q ss_pred ECCc-----h--hhHHHHHHhcccCCEEEEEe
Q 042784 240 DNVG-----G--KMLEAVLNHVNVHARIILCG 264 (356)
Q Consensus 240 d~~g-----~--~~~~~~~~~l~~~G~~v~~g 264 (356)
.... . ..+..+.+.|+|+|.++.+-
T Consensus 118 ~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (255)
T PRK11036 118 FHAVLEWVADPKSVLQTLWSVLRPGGALSLMF 149 (255)
T ss_pred ehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 6432 2 26788999999999998653
No 439
>PRK08317 hypothetical protein; Provisional
Probab=95.92 E-value=0.084 Score=45.47 Aligned_cols=103 Identities=21% Similarity=0.262 Sum_probs=67.8
Q ss_pred HhCCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHh-CCCceeecCChhhHHHHHHHHCCCC
Q 042784 158 VLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKG--CKVVGSTGSDDNVKLLKEEF-GYDDAFNYNSEMSFDAALTKYFPNG 234 (356)
Q Consensus 158 ~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G--~~V~~~~~s~~~~~~~~~~~-g~~~v~~~~~~~~~~~~i~~~~~~~ 234 (356)
+...+.++++||-.|+ |. |..+..+++..+ .++++++.+++..+.+++.. .....+.+.. .+... . .+..+.
T Consensus 13 ~~~~~~~~~~vLdiG~-G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~-~d~~~-~-~~~~~~ 87 (241)
T PRK08317 13 ELLAVQPGDRVLDVGC-GP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVR-GDADG-L-PFPDGS 87 (241)
T ss_pred HHcCCCCCCEEEEeCC-CC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEe-ccccc-C-CCCCCC
Confidence 4567889999999996 44 888889998874 59999999998888887331 1111111111 11110 0 122356
Q ss_pred ceEEEECCc-----h--hhHHHHHHhcccCCEEEEEec
Q 042784 235 IDVYLDNVG-----G--KMLEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 235 ~d~vld~~g-----~--~~~~~~~~~l~~~G~~v~~g~ 265 (356)
+|+|+.... . ..+..+.++|+++|.++....
T Consensus 88 ~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 125 (241)
T PRK08317 88 FDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLDT 125 (241)
T ss_pred ceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence 999886432 2 277889999999999987653
No 440
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=95.90 E-value=0.047 Score=49.24 Aligned_cols=40 Identities=13% Similarity=0.254 Sum_probs=33.0
Q ss_pred CCCEEEEEcC--CChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 042784 164 SGSNVFVSAA--AGGVGMFAGQLAKLKGCKVVGSTGSDDNVKL 204 (356)
Q Consensus 164 ~g~~VlV~g~--~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~ 204 (356)
.|+++||+|+ ++|+|.++++.+...|++|++ .+...+++.
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~ 49 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNI 49 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhH
Confidence 4899999999 799999999999999999988 445444433
No 441
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.89 E-value=0.054 Score=46.85 Aligned_cols=79 Identities=27% Similarity=0.349 Sum_probs=50.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHH---HhCCC-ce--eecCChhhHHHHHHHHC--CCCc
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDD-NVKLLKE---EFGYD-DA--FNYNSEMSFDAALTKYF--PNGI 235 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~-~~~~~~~---~~g~~-~v--~~~~~~~~~~~~i~~~~--~~~~ 235 (356)
..+|||+|++|.+|..++..+...|.+|+++.++.. ..+.+.+ ..+.. .. .|..+..++.+.+.+.. -+++
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 85 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRI 85 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCC
Confidence 568999999999999999999899998877665543 3332221 22221 11 24444344444443332 1469
Q ss_pred eEEEECCc
Q 042784 236 DVYLDNVG 243 (356)
Q Consensus 236 d~vld~~g 243 (356)
|.+|.+.|
T Consensus 86 d~vi~~ag 93 (249)
T PRK12825 86 DILVNNAG 93 (249)
T ss_pred CEEEECCc
Confidence 99999887
No 442
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.89 E-value=0.71 Score=41.93 Aligned_cols=89 Identities=16% Similarity=0.164 Sum_probs=56.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH----------hCCC-----ceeecCChhhHHHHHHHH
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEE----------FGYD-----DAFNYNSEMSFDAALTKY 230 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~----------~g~~-----~v~~~~~~~~~~~~i~~~ 230 (356)
.+|.|.|+ |.+|...++.+...|.+|.+.+.+++..+.+++. .|.. .-+.+. .++.+.+
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~--~~l~~av--- 81 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFV--ATIEACV--- 81 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceec--CCHHHHh---
Confidence 58999997 9999988888888899999999988765544321 1110 001111 1222222
Q ss_pred CCCCceEEEECCchh------hHHHHHHhcccCCEEEEE
Q 042784 231 FPNGIDVYLDNVGGK------MLEAVLNHVNVHARIILC 263 (356)
Q Consensus 231 ~~~~~d~vld~~g~~------~~~~~~~~l~~~G~~v~~ 263 (356)
.++|+|++|+... .+..+.+.++++. ++..
T Consensus 82 --~~aDlViEavpE~l~vK~~lf~~l~~~~~~~a-IlaS 117 (321)
T PRK07066 82 --ADADFIQESAPEREALKLELHERISRAAKPDA-IIAS 117 (321)
T ss_pred --cCCCEEEECCcCCHHHHHHHHHHHHHhCCCCe-EEEE
Confidence 4689999998753 4555555666654 4433
No 443
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.89 E-value=0.19 Score=38.03 Aligned_cols=91 Identities=19% Similarity=0.162 Sum_probs=61.1
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchh--
Q 042784 168 VFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGK-- 245 (356)
Q Consensus 168 VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~-- 245 (356)
|+|.|. |.+|...++.++..+.+|++++.++++.+.++ +.|.. ++..+ ..-.+.+++..-..++.++-+++++
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-~~~~~-~i~gd--~~~~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR-EEGVE-VIYGD--ATDPEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTSE-EEES---TTSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-hcccc-ccccc--chhhhHHhhcCccccCEEEEccCCHHH
Confidence 678897 99999999999997779999999999999998 66744 44322 1222234443324689999888775
Q ss_pred --hHHHHHHhcccCCEEEEE
Q 042784 246 --MLEAVLNHVNVHARIILC 263 (356)
Q Consensus 246 --~~~~~~~~l~~~G~~v~~ 263 (356)
......+.+.+..+++..
T Consensus 76 n~~~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 76 NLLIALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEE
Confidence 222344445566666644
No 444
>PLN00016 RNA-binding protein; Provisional
Probab=95.89 E-value=0.062 Score=50.16 Aligned_cols=96 Identities=17% Similarity=0.231 Sum_probs=60.4
Q ss_pred CCEEEEE----cCCChHHHHHHHHHHHCCCEEEEEeCChHHHHH-----------HHHHhCCCceeecCChhhHHHHHHH
Q 042784 165 GSNVFVS----AAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKL-----------LKEEFGYDDAFNYNSEMSFDAALTK 229 (356)
Q Consensus 165 g~~VlV~----g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~-----------~~~~~g~~~v~~~~~~~~~~~~i~~ 229 (356)
..+|||+ ||+|-+|..++..+...|.+|+++++++..... +. ..|... +.. +..++.+.+
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~~-v~~-D~~d~~~~~-- 126 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVKT-VWG-DPADVKSKV-- 126 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-hcCceE-EEe-cHHHHHhhh--
Confidence 4689999 999999999998888889999999987654221 11 223332 211 112222222
Q ss_pred HCCCCceEEEECCchh--hHHHHHHhcccC--CEEEEEecc
Q 042784 230 YFPNGIDVYLDNVGGK--MLEAVLNHVNVH--ARIILCGMI 266 (356)
Q Consensus 230 ~~~~~~d~vld~~g~~--~~~~~~~~l~~~--G~~v~~g~~ 266 (356)
...++|+|+++.+.. .....++.++.. .+++.++..
T Consensus 127 -~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~ 166 (378)
T PLN00016 127 -AGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA 166 (378)
T ss_pred -ccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 234799999998753 334455555433 378876653
No 445
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=95.89 E-value=0.035 Score=49.23 Aligned_cols=73 Identities=16% Similarity=0.167 Sum_probs=46.0
Q ss_pred EEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhC----CCce--------eecCChhhHHHHHHHHCC-C
Q 042784 168 VFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFG----YDDA--------FNYNSEMSFDAALTKYFP-N 233 (356)
Q Consensus 168 VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g----~~~v--------~~~~~~~~~~~~i~~~~~-~ 233 (356)
|||+||+|++|...++-+...+. +++.+++++.++-.++.++. ...+ -|.++ .+.+.++.. .
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd----~~~l~~~~~~~ 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRD----KERLNRIFEEY 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCH----HHHHHHHTT--
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccC----HHHHHHHHhhc
Confidence 79999999999998888877787 89999999988877776662 2111 13332 223444432 3
Q ss_pred CceEEEECCch
Q 042784 234 GIDVYLDNVGG 244 (356)
Q Consensus 234 ~~d~vld~~g~ 244 (356)
++|+||.++.-
T Consensus 77 ~pdiVfHaAA~ 87 (293)
T PF02719_consen 77 KPDIVFHAAAL 87 (293)
T ss_dssp T-SEEEE----
T ss_pred CCCEEEEChhc
Confidence 79999998874
No 446
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.88 E-value=0.086 Score=46.63 Aligned_cols=96 Identities=19% Similarity=0.109 Sum_probs=69.2
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhH
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 223 (356)
-.||+....+..+....---.|++|+|.|-+.-+|.-...+++..|++|++..... +++
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T---------------------~~l 196 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT---------------------KNL 196 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC---------------------CCH
Confidence 35666666666665433223599999999988899999999999999988765221 234
Q ss_pred HHHHHHHCCCCceEEEECCchhhHHHHHHhcccCCEEEEEecc
Q 042784 224 DAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMI 266 (356)
Q Consensus 224 ~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~ 266 (356)
.+.+++ +|+++.++|.+.+-. -..++++..++.+|..
T Consensus 197 ~~~~~~-----ADIvi~avG~p~~v~-~~~vk~gavVIDvGin 233 (285)
T PRK10792 197 RHHVRN-----ADLLVVAVGKPGFIP-GEWIKPGAIVIDVGIN 233 (285)
T ss_pred HHHHhh-----CCEEEEcCCCccccc-HHHcCCCcEEEEcccc
Confidence 444433 899999999875422 3788999999999864
No 447
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.86 E-value=0.1 Score=44.89 Aligned_cols=99 Identities=14% Similarity=0.287 Sum_probs=61.9
Q ss_pred HHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC---EEEEEeCC----hHH--------HHHHHHHhCCCceeecC
Q 042784 154 VGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC---KVVGSTGS----DDN--------VKLLKEEFGYDDAFNYN 218 (356)
Q Consensus 154 ~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~---~V~~~~~s----~~~--------~~~~~~~~g~~~v~~~~ 218 (356)
.++.....--.+.+++|.|+ |+.|..++..+...|+ +|+.++++ .++ .++++ .++... .+
T Consensus 14 ~al~~~g~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~-~~~~~~-~~-- 88 (226)
T cd05311 14 NALKLVGKKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAK-ETNPEK-TG-- 88 (226)
T ss_pred HHHHHhCCCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHH-HhccCc-cc--
Confidence 34443332245789999997 9999999988888897 48888877 343 23333 443221 11
Q ss_pred ChhhHHHHHHHHCCCCceEEEECCchhhH-HHHHHhcccCCEEEEEe
Q 042784 219 SEMSFDAALTKYFPNGIDVYLDNVGGKML-EAVLNHVNVHARIILCG 264 (356)
Q Consensus 219 ~~~~~~~~i~~~~~~~~d~vld~~g~~~~-~~~~~~l~~~G~~v~~g 264 (356)
.++.+.++ ++|++|.+++...+ ...++.+++...++.+.
T Consensus 89 --~~l~~~l~-----~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 89 --GTLKEALK-----GADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred --CCHHHHHh-----cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 13434442 38999999974333 35566666766665444
No 448
>PRK08655 prephenate dehydrogenase; Provisional
Probab=95.86 E-value=0.096 Score=49.82 Aligned_cols=88 Identities=18% Similarity=0.237 Sum_probs=57.7
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchhh
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGKM 246 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~ 246 (356)
+|.|.||.|.+|.+.+..++..|.+|++.++++++......++|.. . . .+..+.+ ..+|+|+-|+....
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~-~---~--~~~~e~~-----~~aDvVIlavp~~~ 70 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVE-Y---A--NDNIDAA-----KDADIVIISVPINV 70 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCe-e---c--cCHHHHh-----ccCCEEEEecCHHH
Confidence 6899997799999999999999999999998877753333366652 1 1 1222222 23688887777543
Q ss_pred ----HHHHHHhcccCCEEEEEec
Q 042784 247 ----LEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 247 ----~~~~~~~l~~~G~~v~~g~ 265 (356)
+......++++..++.++.
T Consensus 71 ~~~vl~~l~~~l~~~~iViDvsS 93 (437)
T PRK08655 71 TEDVIKEVAPHVKEGSLLMDVTS 93 (437)
T ss_pred HHHHHHHHHhhCCCCCEEEEccc
Confidence 3333344556666666654
No 449
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=95.85 E-value=0.058 Score=49.79 Aligned_cols=77 Identities=22% Similarity=0.294 Sum_probs=50.8
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--CCC-cee--ecCChhhHHHHHHHHCCCCce
Q 042784 162 PKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEF--GYD-DAF--NYNSEMSFDAALTKYFPNGID 236 (356)
Q Consensus 162 ~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~--g~~-~v~--~~~~~~~~~~~i~~~~~~~~d 236 (356)
-..+.+|||+|++|.+|..+++.+...|.+|++++++.++...+...+ +.. .++ |..+...+.+.+ .++|
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~~d 81 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAV-----KGCD 81 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHH-----cCCC
Confidence 356789999999999999999988889999999887766554433232 111 122 333322232222 2489
Q ss_pred EEEECCc
Q 042784 237 VYLDNVG 243 (356)
Q Consensus 237 ~vld~~g 243 (356)
+||.+.+
T Consensus 82 ~Vih~A~ 88 (353)
T PLN02896 82 GVFHVAA 88 (353)
T ss_pred EEEECCc
Confidence 9999876
No 450
>PRK14982 acyl-ACP reductase; Provisional
Probab=95.83 E-value=0.071 Score=48.54 Aligned_cols=95 Identities=18% Similarity=0.181 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHH-HCCC-EEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEE
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAK-LKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLD 240 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~-~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld 240 (356)
-.+.+|+|+||+|.+|..+++.+. ..|. +++.+.+++++...+.++++...+ .++.+.+ ..+|+|+.
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i------~~l~~~l-----~~aDiVv~ 221 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI------LSLEEAL-----PEADIVVW 221 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH------HhHHHHH-----ccCCEEEE
Confidence 467899999999999999887775 4576 899999888888777655542211 2233333 24899999
Q ss_pred CCchh-hHHHHHHhcccCCEEEEEecccc
Q 042784 241 NVGGK-MLEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 241 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
+++.. .+..-...+++.-.++.++.+-.
T Consensus 222 ~ts~~~~~~I~~~~l~~~~~viDiAvPRD 250 (340)
T PRK14982 222 VASMPKGVEIDPETLKKPCLMIDGGYPKN 250 (340)
T ss_pred CCcCCcCCcCCHHHhCCCeEEEEecCCCC
Confidence 98863 22111234566667777777544
No 451
>PLN02686 cinnamoyl-CoA reductase
Probab=95.83 E-value=0.062 Score=49.97 Aligned_cols=44 Identities=14% Similarity=0.117 Sum_probs=36.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLK 206 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~ 206 (356)
..+++|||+||+|.+|..++..+...|++|+++.++.++.+.++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 55789999999999999999999999999988877766554443
No 452
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=95.82 E-value=0.14 Score=46.51 Aligned_cols=89 Identities=19% Similarity=0.155 Sum_probs=63.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
.|.++.|.|. |.+|.+..+.++..|.+|+..+++.. .+..+ .+++. |. ++.+.+.+ .|++.-...
T Consensus 145 ~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~-~~~~~----y~---~l~ell~~-----sDii~l~~P 209 (324)
T COG1052 145 RGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPN-PEAEK-ELGAR----YV---DLDELLAE-----SDIISLHCP 209 (324)
T ss_pred CCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCC-hHHHh-hcCce----ec---cHHHHHHh-----CCEEEEeCC
Confidence 4899999996 99999999999999999999987765 33333 44433 22 24444543 788876654
Q ss_pred h--h----hHHHHHHhcccCCEEEEEeccc
Q 042784 244 G--K----MLEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 244 ~--~----~~~~~~~~l~~~G~~v~~g~~~ 267 (356)
. + .-...+..|++++.+|.++...
T Consensus 210 lt~~T~hLin~~~l~~mk~ga~lVNtaRG~ 239 (324)
T COG1052 210 LTPETRHLINAEELAKMKPGAILVNTARGG 239 (324)
T ss_pred CChHHhhhcCHHHHHhCCCCeEEEECCCcc
Confidence 3 2 2246788999999999887644
No 453
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=95.79 E-value=0.049 Score=46.78 Aligned_cols=74 Identities=16% Similarity=0.188 Sum_probs=52.9
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-ceeecCChhhHHHHHHHHCCCCceEEEECCch
Q 042784 168 VFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-DAFNYNSEMSFDAALTKYFPNGIDVYLDNVGG 244 (356)
Q Consensus 168 VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~ 244 (356)
|||+||+|-+|..++..+...|..|+++.++.........+.... ...|..+...+.+.+... .+|.||.+.+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA---NIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH---TESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc---CceEEEEeecc
Confidence 799999999999999999999999988887777665554233221 223555534555555543 68999998774
No 454
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=95.78 E-value=0.052 Score=50.06 Aligned_cols=49 Identities=12% Similarity=0.032 Sum_probs=39.7
Q ss_pred hHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChH
Q 042784 151 AAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDD 200 (356)
Q Consensus 151 ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~ 200 (356)
|||.-++....++ +.+|||+||+|-+|..++..+...|.+|+++++...
T Consensus 2 ~~~~~~~~~~~~~-~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~ 50 (348)
T PRK15181 2 TAYEELRTKLVLA-PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFST 50 (348)
T ss_pred chhhhhhhccccc-CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 6777776555444 579999999999999999999989999999987543
No 455
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.78 E-value=0.093 Score=46.80 Aligned_cols=96 Identities=17% Similarity=0.105 Sum_probs=67.5
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhH
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 223 (356)
-+||+....+..+....---.|++|.|.|.++.+|.-...++...|++|++..+... +.
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~---------------------~l 196 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST---------------------DA 196 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC---------------------CH
Confidence 456666666666654433346999999999789999999999999999988753321 12
Q ss_pred HHHHHHHCCCCceEEEECCchh-hHHHHHHhcccCCEEEEEeccc
Q 042784 224 DAALTKYFPNGIDVYLDNVGGK-MLEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 224 ~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~ 267 (356)
.+.++ .+|+|+-++|.+ .+... .++++..++.+|...
T Consensus 197 ~e~~~-----~ADIVIsavg~~~~v~~~--~ik~GaiVIDvgin~ 234 (301)
T PRK14194 197 KALCR-----QADIVVAAVGRPRLIDAD--WLKPGAVVIDVGINR 234 (301)
T ss_pred HHHHh-----cCCEEEEecCChhcccHh--hccCCcEEEEecccc
Confidence 22232 379999999986 33333 389999999998643
No 456
>PRK14967 putative methyltransferase; Provisional
Probab=95.76 E-value=0.25 Score=42.42 Aligned_cols=95 Identities=19% Similarity=0.147 Sum_probs=62.8
Q ss_pred CCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHHHHHCCCCc
Q 042784 160 GQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAALTKYFPNGI 235 (356)
Q Consensus 160 ~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~~~~ 235 (356)
..++++++||-.|+ |. |..++.+++. ++ +|++++.+++..+.+++ ..+....+.. .++.+.+ ..+.|
T Consensus 32 ~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~---~d~~~~~---~~~~f 102 (223)
T PRK14967 32 EGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR---GDWARAV---EFRPF 102 (223)
T ss_pred cccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE---Cchhhhc---cCCCe
Confidence 45788999999995 55 8888888875 66 99999999987776653 2333211211 2332222 23579
Q ss_pred eEEEECCch----------------------------hhHHHHHHhcccCCEEEEE
Q 042784 236 DVYLDNVGG----------------------------KMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 236 d~vld~~g~----------------------------~~~~~~~~~l~~~G~~v~~ 263 (356)
|+|+..... ..+..+.+.|+++|+++.+
T Consensus 103 D~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 103 DVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred eEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 999975210 1345678899999998865
No 457
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.74 E-value=0.071 Score=42.98 Aligned_cols=99 Identities=19% Similarity=0.133 Sum_probs=60.9
Q ss_pred cccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhh
Q 042784 143 SSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMS 222 (356)
Q Consensus 143 a~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~ 222 (356)
.-+|++....+..+....---.|++|+|.|.+..+|.-...+++..|+.|....... ++
T Consensus 14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T---------------------~~ 72 (160)
T PF02882_consen 14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT---------------------KN 72 (160)
T ss_dssp SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS---------------------SS
T ss_pred CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC---------------------Cc
Confidence 455666666666665433335799999999999999999999999999998764221 22
Q ss_pred HHHHHHHHCCCCceEEEECCchhhHHHHHHhcccCCEEEEEecccc
Q 042784 223 FDAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 223 ~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
+.+.++ .+|+|+-++|.+.+- --..++++..++.+|....
T Consensus 73 l~~~~~-----~ADIVVsa~G~~~~i-~~~~ik~gavVIDvG~~~~ 112 (160)
T PF02882_consen 73 LQEITR-----RADIVVSAVGKPNLI-KADWIKPGAVVIDVGINYV 112 (160)
T ss_dssp HHHHHT-----TSSEEEE-SSSTT-B--GGGS-TTEEEEE--CEEE
T ss_pred ccceee-----eccEEeeeecccccc-ccccccCCcEEEecCCccc
Confidence 333332 389999999986442 2346899888888887543
No 458
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.74 E-value=0.079 Score=46.36 Aligned_cols=80 Identities=18% Similarity=0.232 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEeCC-----------hHHHHHHHH---HhCCC-c--eeecCChhhHH
Q 042784 164 SGSNVFVSAAAG--GVGMFAGQLAKLKGCKVVGSTGS-----------DDNVKLLKE---EFGYD-D--AFNYNSEMSFD 224 (356)
Q Consensus 164 ~g~~VlV~g~~g--~vG~~~i~la~~~G~~V~~~~~s-----------~~~~~~~~~---~~g~~-~--v~~~~~~~~~~ 224 (356)
.+.++||+|++| ++|.+.+..+...|++|++++++ ..+...+.+ ..+.. + ..|..+..++.
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 83 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPN 83 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 357899999984 89999888888889999999876 222111221 22322 1 12444433444
Q ss_pred HHHHHHC--CCCceEEEECCc
Q 042784 225 AALTKYF--PNGIDVYLDNVG 243 (356)
Q Consensus 225 ~~i~~~~--~~~~d~vld~~g 243 (356)
..+.++. -+.+|+++.+.|
T Consensus 84 ~~~~~~~~~~g~id~vi~~ag 104 (256)
T PRK12748 84 RVFYAVSERLGDPSILINNAA 104 (256)
T ss_pred HHHHHHHHhCCCCCEEEECCC
Confidence 4344332 146999999886
No 459
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=95.73 E-value=0.074 Score=46.58 Aligned_cols=43 Identities=33% Similarity=0.393 Sum_probs=33.4
Q ss_pred EEEEEcCCChHHHHHHHH-HHH---CCCEEEEEeCChHHHHHHHHHh
Q 042784 167 NVFVSAAAGGVGMFAGQL-AKL---KGCKVVGSTGSDDNVKLLKEEF 209 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~l-a~~---~G~~V~~~~~s~~~~~~~~~~~ 209 (356)
.++|+|+++++|.+++.. ++. .|++|+.+.+++++.+.+.+++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l 48 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI 48 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHH
Confidence 589999999999987654 442 6999999999888776655443
No 460
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=95.71 E-value=0.23 Score=43.87 Aligned_cols=128 Identities=18% Similarity=0.139 Sum_probs=84.1
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcee--e------cCC--hhhHHHHHHHHC
Q 042784 162 PKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAF--N------YNS--EMSFDAALTKYF 231 (356)
Q Consensus 162 ~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~--~------~~~--~~~~~~~i~~~~ 231 (356)
--++.++++.|+ |..|+.++..++..|+-|...+....+.+..+ ++|+...- + |-. ..+|.++-.++.
T Consensus 161 tv~pA~vlv~G~-Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~-s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~ 238 (356)
T COG3288 161 TVSPAKVLVIGA-GVAGLAAIATAVRLGAIVTARDLRMFKKEQVE-SLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELV 238 (356)
T ss_pred cccchhhhhhhH-HHHHHHHHHHHhhcceEEehhhhhhHHhhhhh-hcccccccccccccCCCccccCCHHHHHHHHHHH
Confidence 356678899997 99999999999999999999988888888887 78874221 1 110 023333222222
Q ss_pred ---CCCceEEEECC---chh----hHHHHHHhcccCCEEEEEecccccccccccccchhhhhhhhccceEEEEEe
Q 042784 232 ---PNGIDVYLDNV---GGK----MLEAVLNHVNVHARIILCGMISQYNKVWTERDGVRNLLNMIGKEVKMEGFM 296 (356)
Q Consensus 232 ---~~~~d~vld~~---g~~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (356)
-+++|+||-+. |.+ .-......++|+..+|.+....+.+-..+. +..-....++++.|+.
T Consensus 239 a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~-----pg~~v~~~gV~iig~~ 308 (356)
T COG3288 239 AEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTE-----PGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCccccc-----CCeEEEeCCeEEEeec
Confidence 24799999876 332 345667889999999988776554311111 1122344567887764
No 461
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.71 E-value=0.1 Score=46.51 Aligned_cols=95 Identities=17% Similarity=0.133 Sum_probs=66.7
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHhCCCceeecCChhh
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGST-GSDDNVKLLKEEFGYDDAFNYNSEMS 222 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~-~s~~~~~~~~~~~g~~~v~~~~~~~~ 222 (356)
-+||+....+..|....---.|++|+|+|-++.+|.-.+.++...|+.|++.. ++. +
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~----------------------~ 194 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR----------------------D 194 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC----------------------C
Confidence 45666555565555433235699999999989999999999999999998874 222 1
Q ss_pred HHHHHHHHCCCCceEEEECCchhh-HHHHHHhcccCCEEEEEeccc
Q 042784 223 FDAALTKYFPNGIDVYLDNVGGKM-LEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 223 ~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~ 267 (356)
+.+.++ .+|+|+-++|.+. +... .++++..++.+|...
T Consensus 195 l~e~~~-----~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin~ 233 (296)
T PRK14188 195 LPAVCR-----RADILVAAVGRPEMVKGD--WIKPGATVIDVGINR 233 (296)
T ss_pred HHHHHh-----cCCEEEEecCChhhcchh--eecCCCEEEEcCCcc
Confidence 222222 3799999999863 3333 389999999998754
No 462
>PLN02244 tocopherol O-methyltransferase
Probab=95.71 E-value=0.089 Score=48.33 Aligned_cols=98 Identities=18% Similarity=0.186 Sum_probs=64.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHHHHHCCCCceEEE
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAALTKYFPNGIDVYL 239 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vl 239 (356)
+++++||=.| .|.|..+..+++..|++|++++.++...+.+++ ..|...-+.... .+..+ + .+..+.||+|+
T Consensus 117 ~~~~~VLDiG--CG~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~-~D~~~-~-~~~~~~FD~V~ 191 (340)
T PLN02244 117 KRPKRIVDVG--CGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQV-ADALN-Q-PFEDGQFDLVW 191 (340)
T ss_pred CCCCeEEEec--CCCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE-cCccc-C-CCCCCCccEEE
Confidence 6789998888 456778888898889999999999987776653 223321111111 11111 0 11235799998
Q ss_pred ECCch-------hhHHHHHHhcccCCEEEEEec
Q 042784 240 DNVGG-------KMLEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 240 d~~g~-------~~~~~~~~~l~~~G~~v~~g~ 265 (356)
..... ..+.++.+.|+|+|+++....
T Consensus 192 s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 192 SMESGEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred ECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 64332 267888999999999987654
No 463
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.71 E-value=0.37 Score=42.86 Aligned_cols=55 Identities=27% Similarity=0.420 Sum_probs=44.9
Q ss_pred hCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC---ChHHHHHHHHHhCCCcee
Q 042784 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTG---SDDNVKLLKEEFGYDDAF 215 (356)
Q Consensus 159 ~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~---s~~~~~~~~~~~g~~~v~ 215 (356)
.+.+++|. .+|-+.+|.+|.+...+|+.+|.+++.+.+ |.++.++++ .+|+.-+.
T Consensus 56 ~G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~-a~GAevi~ 113 (300)
T COG0031 56 RGLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLR-ALGAEVIL 113 (300)
T ss_pred cCCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHH-HcCCEEEE
Confidence 57799999 557788899999999999999997776653 678888888 89986444
No 464
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=95.67 E-value=0.99 Score=37.27 Aligned_cols=39 Identities=23% Similarity=0.181 Sum_probs=32.3
Q ss_pred EEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLK 206 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~ 206 (356)
+|.|.|+ |.+|...+.++...|.+|...+.+++..+..+
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~ 39 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERAR 39 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhh
Confidence 5889997 99999988888888999999999988776654
No 465
>KOG3201 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.67 E-value=0.069 Score=42.46 Aligned_cols=121 Identities=14% Similarity=0.088 Sum_probs=74.3
Q ss_pred cccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCceeecCCh-
Q 042784 143 SSLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKEEFGYDDAFNYNSE- 220 (356)
Q Consensus 143 a~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~- 220 (356)
+.+|..-..||..+.+ .+.-.|.+|+=.|| |-.|++.+.+|...-. .|..++.+++..+-+++-.......-++..
T Consensus 9 ciwpseeala~~~l~~-~n~~rg~~ilelgg-gft~laglmia~~a~~~~v~ltdgne~svrnv~ki~~~n~~s~~tsc~ 86 (201)
T KOG3201|consen 9 CIWPSEEALAWTILRD-PNKIRGRRILELGG-GFTGLAGLMIACKAPDSSVWLTDGNEESVRNVEKIRNSNMASSLTSCC 86 (201)
T ss_pred EecccHHHHHHHHHhc-hhHHhHHHHHHhcC-chhhhhhhheeeecCCceEEEecCCHHHHHHHHHHHhcccccccceeh
Confidence 4555555677888864 44445789999998 9999999999987765 999999888776666532111111111110
Q ss_pred ---hhHHHHHHHHCCCCceEEE--ECCchh-----hHHHHHHhcccCCEEEEEec
Q 042784 221 ---MSFDAALTKYFPNGIDVYL--DNVGGK-----MLEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 221 ---~~~~~~i~~~~~~~~d~vl--d~~g~~-----~~~~~~~~l~~~G~~v~~g~ 265 (356)
..+.....+..+..||+|+ ||+=.+ ........|+|.|+-..++.
T Consensus 87 vlrw~~~~aqsq~eq~tFDiIlaADClFfdE~h~sLvdtIk~lL~p~g~Al~fsP 141 (201)
T KOG3201|consen 87 VLRWLIWGAQSQQEQHTFDIILAADCLFFDEHHESLVDTIKSLLRPSGRALLFSP 141 (201)
T ss_pred hhHHHHhhhHHHHhhCcccEEEeccchhHHHHHHHHHHHHHHHhCcccceeEecC
Confidence 1111111112234699998 566543 44556678999999665533
No 466
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=95.65 E-value=0.29 Score=37.17 Aligned_cols=89 Identities=15% Similarity=0.182 Sum_probs=60.2
Q ss_pred EEEEEcCCChHHHHHHHHHHHC--CCEEEEE-eCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 167 NVFVSAAAGGVGMFAGQLAKLK--GCKVVGS-TGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 167 ~VlV~g~~g~vG~~~i~la~~~--G~~V~~~-~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
+|.|.|+ |..|......++.. +.+++++ ++++++.+.+.+.+|.. . | .++.+.+.+ ..+|+|+-++.
T Consensus 2 ~v~iiG~-G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~--~---~~~~~ll~~---~~~D~V~I~tp 71 (120)
T PF01408_consen 2 RVGIIGA-GSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-V--Y---TDLEELLAD---EDVDAVIIATP 71 (120)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-E--E---SSHHHHHHH---TTESEEEEESS
T ss_pred EEEEECC-cHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-c--h---hHHHHHHHh---hcCCEEEEecC
Confidence 6889997 99998877666555 4577644 55666777666588877 3 3 334444443 36999999998
Q ss_pred hh-hHHHHHHhcccCCEEEEEecc
Q 042784 244 GK-MLEAVLNHVNVHARIILCGMI 266 (356)
Q Consensus 244 ~~-~~~~~~~~l~~~G~~v~~g~~ 266 (356)
.. +...+..+++.+- -+++..+
T Consensus 72 ~~~h~~~~~~~l~~g~-~v~~EKP 94 (120)
T PF01408_consen 72 PSSHAEIAKKALEAGK-HVLVEKP 94 (120)
T ss_dssp GGGHHHHHHHHHHTTS-EEEEESS
T ss_pred CcchHHHHHHHHHcCC-EEEEEcC
Confidence 86 6667777777666 4545443
No 467
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=95.62 E-value=0.043 Score=50.33 Aligned_cols=77 Identities=13% Similarity=0.097 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHH-----HHHHHHH---hCCC---ceeecCChhhHHHHHHHHCC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDN-----VKLLKEE---FGYD---DAFNYNSEMSFDAALTKYFP 232 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~-----~~~~~~~---~g~~---~v~~~~~~~~~~~~i~~~~~ 232 (356)
++.+|||+||+|.+|..+++.+...|.+|+++++..++ .+.+.+. .+.. ...|..+...+.+.+.+
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 81 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD--- 81 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH---
Confidence 36789999999999999999999999999998865432 2222100 0111 11344443344444443
Q ss_pred CCceEEEECCc
Q 042784 233 NGIDVYLDNVG 243 (356)
Q Consensus 233 ~~~d~vld~~g 243 (356)
.++|+|+.+.+
T Consensus 82 ~~~d~Vih~A~ 92 (340)
T PLN02653 82 IKPDEVYNLAA 92 (340)
T ss_pred cCCCEEEECCc
Confidence 24899999876
No 468
>PLN02427 UDP-apiose/xylose synthase
Probab=95.62 E-value=0.06 Score=50.38 Aligned_cols=77 Identities=16% Similarity=0.151 Sum_probs=49.8
Q ss_pred CCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCC------Cce--eecCChhhHHHHHHHHC
Q 042784 161 QPKSGSNVFVSAAAGGVGMFAGQLAKLK-GCKVVGSTGSDDNVKLLKEEFGY------DDA--FNYNSEMSFDAALTKYF 231 (356)
Q Consensus 161 ~~~~g~~VlV~g~~g~vG~~~i~la~~~-G~~V~~~~~s~~~~~~~~~~~g~------~~v--~~~~~~~~~~~~i~~~~ 231 (356)
+..+..+|||+||+|-+|..+++.+... |.+|++++++.++...+. ..+. .+. .|..+...+.+.+
T Consensus 10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~-~~~~~~~~~~~~~~~~Dl~d~~~l~~~~---- 84 (386)
T PLN02427 10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLL-EPDTVPWSGRIQFHRINIKHDSRLEGLI---- 84 (386)
T ss_pred CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhh-ccccccCCCCeEEEEcCCCChHHHHHHh----
Confidence 3344568999999999999998888777 589999987766555443 2221 111 1333323333322
Q ss_pred CCCceEEEECCc
Q 042784 232 PNGIDVYLDNVG 243 (356)
Q Consensus 232 ~~~~d~vld~~g 243 (356)
.++|+||.+++
T Consensus 85 -~~~d~ViHlAa 95 (386)
T PLN02427 85 -KMADLTINLAA 95 (386)
T ss_pred -hcCCEEEEccc
Confidence 24899999886
No 469
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.58 E-value=0.11 Score=46.83 Aligned_cols=94 Identities=5% Similarity=-0.002 Sum_probs=66.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHH-CCC-EEEEEeCChHHHHHHHHHhCCCc-eeecCChhhHHHHHHHHCCCCceEEE
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKL-KGC-KVVGSTGSDDNVKLLKEEFGYDD-AFNYNSEMSFDAALTKYFPNGIDVYL 239 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~-~G~-~V~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vl 239 (356)
....+++|.|+ |..|.+.++.+.. .+. +|.+..+++++.+.+.++++... .+.. .++.+.++ ++|+|+
T Consensus 123 ~~~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~---~~~~~av~-----~aDiVi 193 (304)
T PRK07340 123 APPGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEP---LDGEAIPE-----AVDLVV 193 (304)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEE---CCHHHHhh-----cCCEEE
Confidence 45679999996 9999998887754 676 89999999888777665664321 1112 23444443 489999
Q ss_pred ECCchh--hHHHHHHhcccCCEEEEEecccc
Q 042784 240 DNVGGK--MLEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 240 d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
.|+... .+.. .++++-++..+|....
T Consensus 194 taT~s~~Pl~~~---~~~~g~hi~~iGs~~p 221 (304)
T PRK07340 194 TATTSRTPVYPE---AARAGRLVVAVGAFTP 221 (304)
T ss_pred EccCCCCceeCc---cCCCCCEEEecCCCCC
Confidence 998874 4432 2789999999997654
No 470
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.56 E-value=0.17 Score=43.19 Aligned_cols=92 Identities=13% Similarity=0.146 Sum_probs=57.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECC
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSD-DNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNV 242 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~-~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~ 242 (356)
.+.+|||.|| |.++.-=+..+...|++|+++...- +....+. ..|.-..+. ..+... .+ .++++||-|+
T Consensus 24 ~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~-~~~~i~~~~----r~~~~~--dl--~g~~LViaAT 93 (223)
T PRK05562 24 NKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLK-KYGNLKLIK----GNYDKE--FI--KDKHLIVIAT 93 (223)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHH-hCCCEEEEe----CCCChH--Hh--CCCcEEEECC
Confidence 4779999998 9999888888888999988886432 1222222 223321221 111111 11 4689999999
Q ss_pred chhhHHHHHHhc-ccCCEEEEEec
Q 042784 243 GGKMLEAVLNHV-NVHARIILCGM 265 (356)
Q Consensus 243 g~~~~~~~~~~l-~~~G~~v~~g~ 265 (356)
+++.++..+... +..+.++.+..
T Consensus 94 dD~~vN~~I~~~a~~~~~lvn~vd 117 (223)
T PRK05562 94 DDEKLNNKIRKHCDRLYKLYIDCS 117 (223)
T ss_pred CCHHHHHHHHHHHHHcCCeEEEcC
Confidence 998666555544 45577776544
No 471
>PRK00536 speE spermidine synthase; Provisional
Probab=95.56 E-value=0.05 Score=47.62 Aligned_cols=98 Identities=13% Similarity=0.037 Sum_probs=63.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC-ceeecCChhhHHHHHHHHCCCCceEEE-E
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYD-DAFNYNSEMSFDAALTKYFPNGIDVYL-D 240 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d~vl-d 240 (356)
...++|||.| ||=|.++-+++|+-. +|..++..++=.+.+++-|..- ..++... -.+...+.+...+.+|+|| |
T Consensus 71 ~~pk~VLIiG--GGDGg~~REvLkh~~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR-v~l~~~~~~~~~~~fDVIIvD 146 (262)
T PRK00536 71 KELKEVLIVD--GFDLELAHQLFKYDT-HVDFVQADEKILDSFISFFPHFHEVKNNKN-FTHAKQLLDLDIKKYDLIICL 146 (262)
T ss_pred CCCCeEEEEc--CCchHHHHHHHCcCC-eeEEEECCHHHHHHHHHHCHHHHHhhcCCC-EEEeehhhhccCCcCCEEEEc
Confidence 4458999999 667788889999875 9999998888777777322210 0121111 1111123333335799986 5
Q ss_pred CCch-hhHHHHHHhcccCCEEEEEe
Q 042784 241 NVGG-KMLEAVLNHVNVHARIILCG 264 (356)
Q Consensus 241 ~~g~-~~~~~~~~~l~~~G~~v~~g 264 (356)
++-. +.+..+.++|+++|.++.-+
T Consensus 147 s~~~~~fy~~~~~~L~~~Gi~v~Qs 171 (262)
T PRK00536 147 QEPDIHKIDGLKRMLKEDGVFISVA 171 (262)
T ss_pred CCCChHHHHHHHHhcCCCcEEEECC
Confidence 4443 47788999999999988643
No 472
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=95.53 E-value=0.23 Score=42.44 Aligned_cols=98 Identities=21% Similarity=0.178 Sum_probs=61.5
Q ss_pred CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCce--------------eecCChhhHHHH
Q 042784 161 QPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDA--------------FNYNSEMSFDAA 226 (356)
Q Consensus 161 ~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v--------------~~~~~~~~~~~~ 226 (356)
.+.++.+||+.| -|.|.-++.||. .|++|++++.++.-.+.+.++.+.... ++... .++.+.
T Consensus 34 ~~~~~~rvL~~g--CG~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~-~D~~~l 109 (218)
T PRK13255 34 ALPAGSRVLVPL--CGKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYC-GDFFAL 109 (218)
T ss_pred CCCCCCeEEEeC--CCChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEE-CcccCC
Confidence 345678999999 467777887875 799999999999988876434443210 00000 111110
Q ss_pred HHHHCCCCceEEEECCch---------hhHHHHHHhcccCCEEEEE
Q 042784 227 LTKYFPNGIDVYLDNVGG---------KMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 227 i~~~~~~~~d~vld~~g~---------~~~~~~~~~l~~~G~~v~~ 263 (356)
.....+.||.|+|..-- ..+....++|+|+|++.++
T Consensus 110 -~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 110 -TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred -CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 00011358999996531 2578888999999975543
No 473
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=95.53 E-value=0.35 Score=40.17 Aligned_cols=98 Identities=18% Similarity=0.216 Sum_probs=63.7
Q ss_pred HhCCCCCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHHHHHCCC
Q 042784 158 VLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKG-CKVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAALTKYFPN 233 (356)
Q Consensus 158 ~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G-~~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~~ 233 (356)
....+.++++||=.|+ |.|..++.+++... .+|++++.+++..+.+++ .++...+--.. .+.... ..+
T Consensus 25 ~~l~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~--~d~~~~----~~~ 96 (187)
T PRK08287 25 SKLELHRAKHLIDVGA--GTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIP--GEAPIE----LPG 96 (187)
T ss_pred HhcCCCCCCEEEEECC--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEe--cCchhh----cCc
Confidence 3455778899988884 45788888887764 599999999987777653 23432221111 121111 124
Q ss_pred CceEEEECCch----hhHHHHHHhcccCCEEEEE
Q 042784 234 GIDVYLDNVGG----KMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 234 ~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~ 263 (356)
.+|+|+..... ..+..+.+.|+++|+++..
T Consensus 97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 97 KADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred CCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 69999864321 3677888999999998764
No 474
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.52 E-value=0.15 Score=44.99 Aligned_cols=97 Identities=14% Similarity=0.128 Sum_probs=69.3
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhH
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 223 (356)
-+||+....+..+....---.|++|+|.|-|.-+|.-...++...|++|+... +. + .++
T Consensus 135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtich-s~-------------------T-~~l 193 (282)
T PRK14169 135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAH-SK-------------------T-RNL 193 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEC-CC-------------------C-CCH
Confidence 35566555555565433234699999999999999999999999999888653 11 1 233
Q ss_pred HHHHHHHCCCCceEEEECCchhhHHHHHHhcccCCEEEEEeccc
Q 042784 224 DAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 224 ~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 267 (356)
.+.+++ +|+|+-++|.+.+ ---+.++++..++.+|...
T Consensus 194 ~~~~~~-----ADIvI~AvG~p~~-i~~~~vk~GavVIDvGin~ 231 (282)
T PRK14169 194 KQLTKE-----ADILVVAVGVPHF-IGADAVKPGAVVIDVGISR 231 (282)
T ss_pred HHHHhh-----CCEEEEccCCcCc-cCHHHcCCCcEEEEeeccc
Confidence 334433 7999999998754 2345889999999998754
No 475
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.52 E-value=0.39 Score=41.40 Aligned_cols=33 Identities=27% Similarity=0.318 Sum_probs=28.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCC
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGS 198 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s 198 (356)
..+|+|.|. |++|..++..+-..|. +++.++..
T Consensus 11 ~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 11 NAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 467999997 9999999999999999 88888743
No 476
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.52 E-value=0.14 Score=45.44 Aligned_cols=96 Identities=19% Similarity=0.132 Sum_probs=68.6
Q ss_pred cCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHH
Q 042784 145 LGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFD 224 (356)
Q Consensus 145 l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~ 224 (356)
+||+....+..+....---.|.+|+|.|.|..+|.-...++...|++|+..... + .++.
T Consensus 135 ~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~--------------------T-~~l~ 193 (287)
T PRK14173 135 EPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSK--------------------T-QDLP 193 (287)
T ss_pred CCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCC--------------------C-CCHH
Confidence 455555555555433322469999999999999999999999999988865311 1 2344
Q ss_pred HHHHHHCCCCceEEEECCchhhHHHHHHhcccCCEEEEEeccc
Q 042784 225 AALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 225 ~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 267 (356)
+.+++ +|+|+-++|.+.+- --+.++++..++.+|...
T Consensus 194 ~~~~~-----ADIvIsAvGkp~~i-~~~~vk~GavVIDVGin~ 230 (287)
T PRK14173 194 AVTRR-----ADVLVVAVGRPHLI-TPEMVRPGAVVVDVGINR 230 (287)
T ss_pred HHHhh-----CCEEEEecCCcCcc-CHHHcCCCCEEEEccCcc
Confidence 44443 89999999987443 356789999999998754
No 477
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=95.51 E-value=0.088 Score=47.04 Aligned_cols=97 Identities=22% Similarity=0.278 Sum_probs=61.5
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHHHHHCCCCceE
Q 042784 162 PKSGSNVFVSAAAGGVGMFAGQLAKLKGC-KVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAALTKYFPNGIDV 237 (356)
Q Consensus 162 ~~~g~~VlV~g~~g~vG~~~i~la~~~G~-~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~ 237 (356)
..+|++||=.| .|.|.+++..+| +|+ +|++++..+...+.+++ ..|...-+......+ ...+.||+
T Consensus 159 ~~~g~~vLDvG--~GSGILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~-------~~~~~~dl 228 (295)
T PF06325_consen 159 VKPGKRVLDVG--CGSGILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSED-------LVEGKFDL 228 (295)
T ss_dssp SSTTSEEEEES---TTSHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSC-------TCCS-EEE
T ss_pred ccCCCEEEEeC--CcHHHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecc-------cccccCCE
Confidence 57889998888 456777776666 488 89999988766555542 233322221111011 11257999
Q ss_pred EEECCchh----hHHHHHHhcccCCEEEEEecccc
Q 042784 238 YLDNVGGK----MLEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 238 vld~~g~~----~~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
|+-+.-.+ ......+.++++|.+++.|....
T Consensus 229 vvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~ 263 (295)
T PF06325_consen 229 VVANILADVLLELAPDIASLLKPGGYLILSGILEE 263 (295)
T ss_dssp EEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGG
T ss_pred EEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHH
Confidence 99887764 45566678999999999888654
No 478
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=95.50 E-value=0.052 Score=41.96 Aligned_cols=81 Identities=17% Similarity=0.175 Sum_probs=51.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGST-GSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~-~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
.-+|-|+|+ |-+|......++..|.+|..+. ++.++.+.+.+.++...+.+..+ .+ ..+|++|-++.
T Consensus 10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~------~~-----~~aDlv~iavp 77 (127)
T PF10727_consen 10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE------IL-----RDADLVFIAVP 77 (127)
T ss_dssp --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG------GG-----CC-SEEEE-S-
T ss_pred ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc------cc-----ccCCEEEEEec
Confidence 457999997 9999999999999999988775 45556666664555543333321 11 35899999999
Q ss_pred hhhHHHHHHhcccC
Q 042784 244 GKMLEAVLNHVNVH 257 (356)
Q Consensus 244 ~~~~~~~~~~l~~~ 257 (356)
++.+......|...
T Consensus 78 DdaI~~va~~La~~ 91 (127)
T PF10727_consen 78 DDAIAEVAEQLAQY 91 (127)
T ss_dssp CCHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHh
Confidence 98777777776554
No 479
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.50 E-value=0.28 Score=43.02 Aligned_cols=96 Identities=9% Similarity=0.073 Sum_probs=66.0
Q ss_pred hCCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceE
Q 042784 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLK-GCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDV 237 (356)
Q Consensus 159 ~~~~~~g~~VlV~g~~g~vG~~~i~la~~~-G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~ 237 (356)
...+.++++||=.|+ |.|..+..+++.. +.+|++++.+++..+.+++.+....++. .+..+ + .....+|+
T Consensus 26 ~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~----~d~~~-~--~~~~~fD~ 96 (258)
T PRK01683 26 RVPLENPRYVVDLGC--GPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE----ADIAS-W--QPPQALDL 96 (258)
T ss_pred hCCCcCCCEEEEEcc--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE----Cchhc-c--CCCCCccE
Confidence 445678899999984 4677788888876 4699999999998888874432222222 12211 1 11247999
Q ss_pred EEECCch-------hhHHHHHHhcccCCEEEEE
Q 042784 238 YLDNVGG-------KMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 238 vld~~g~-------~~~~~~~~~l~~~G~~v~~ 263 (356)
|+....- ..+..+.+.|+++|.++..
T Consensus 97 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 97 IFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred EEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 9865442 2688889999999998875
No 480
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=95.50 E-value=0.072 Score=46.02 Aligned_cols=102 Identities=20% Similarity=0.280 Sum_probs=62.9
Q ss_pred hCCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHh---CCCce--eecCChhhHHHHHHHHC
Q 042784 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLKG--CKVVGSTGSDDNVKLLKEEF---GYDDA--FNYNSEMSFDAALTKYF 231 (356)
Q Consensus 159 ~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G--~~V~~~~~s~~~~~~~~~~~---g~~~v--~~~~~~~~~~~~i~~~~ 231 (356)
....++|++||=.+ .|.|..+..+++..+ .+|++++.|++-++.+++.. +...+ +..+. .++. +.
T Consensus 42 ~~~~~~g~~vLDv~--~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da-~~lp-----~~ 113 (233)
T PF01209_consen 42 LLGLRPGDRVLDVA--CGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDA-EDLP-----FP 113 (233)
T ss_dssp HHT--S--EEEEET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BT-TB-------S-
T ss_pred ccCCCCCCEEEEeC--CChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCH-HHhc-----CC
Confidence 34578899998887 567888889999876 49999999999888887532 22211 11110 1110 11
Q ss_pred CCCceEEEECCch-------hhHHHHHHhcccCCEEEEEecccc
Q 042784 232 PNGIDVYLDNVGG-------KMLEAVLNHVNVHARIILCGMISQ 268 (356)
Q Consensus 232 ~~~~d~vld~~g~-------~~~~~~~~~l~~~G~~v~~g~~~~ 268 (356)
.+.||+|..+.|- ..+.+..+.|+|+|+++.+....+
T Consensus 114 d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~p 157 (233)
T PF01209_consen 114 DNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSKP 157 (233)
T ss_dssp TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB-
T ss_pred CCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccCC
Confidence 2469999987774 278899999999999988776543
No 481
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=95.48 E-value=0.086 Score=48.44 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=31.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChH
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDD 200 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~ 200 (356)
++|||+||+|.+|..+++.+...|.+|++++++.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence 47999999999999999999999999999987653
No 482
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=95.48 E-value=0.067 Score=48.55 Aligned_cols=38 Identities=21% Similarity=0.322 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHH
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDN 201 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~ 201 (356)
.+.+|||+||+|-+|..++..+...|.+|++++++.++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 36789999999999999999998899999988876554
No 483
>PRK06924 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.11 Score=45.30 Aligned_cols=41 Identities=17% Similarity=0.298 Sum_probs=33.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHH
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSD-DNVKLLK 206 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~-~~~~~~~ 206 (356)
++++|+|++|++|...++.+...|++|+++++++ ++.+.+.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~ 43 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA 43 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH
Confidence 4799999999999999988888899999999876 4444443
No 484
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.47 E-value=0.12 Score=45.30 Aligned_cols=79 Identities=13% Similarity=0.112 Sum_probs=49.2
Q ss_pred CCCEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEeCC-----------hHHH----HHHHHHhCCCc---eeecCChhhH
Q 042784 164 SGSNVFVSAAA--GGVGMFAGQLAKLKGCKVVGSTGS-----------DDNV----KLLKEEFGYDD---AFNYNSEMSF 223 (356)
Q Consensus 164 ~g~~VlV~g~~--g~vG~~~i~la~~~G~~V~~~~~s-----------~~~~----~~~~~~~g~~~---v~~~~~~~~~ 223 (356)
.|.+++|+|++ +++|..++..+...|++|++++++ .++. +.++ +.|... ..|..+..++
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELL-KNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHHH
Confidence 47899999997 489999999888999999887532 1111 1222 334421 1244443444
Q ss_pred HHHHHHHC--CCCceEEEECCc
Q 042784 224 DAALTKYF--PNGIDVYLDNVG 243 (356)
Q Consensus 224 ~~~i~~~~--~~~~d~vld~~g 243 (356)
.+.+.++. -+.+|++|.+.|
T Consensus 84 ~~~~~~~~~~~g~id~li~~ag 105 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNAA 105 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECCC
Confidence 44443332 135899999876
No 485
>PLN02214 cinnamoyl-CoA reductase
Probab=95.47 E-value=0.092 Score=48.28 Aligned_cols=76 Identities=21% Similarity=0.306 Sum_probs=50.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHH--HHHHHhC-C-C--cee--ecCChhhHHHHHHHHCCCC
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVK--LLKEEFG-Y-D--DAF--NYNSEMSFDAALTKYFPNG 234 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~--~~~~~~g-~-~--~v~--~~~~~~~~~~~i~~~~~~~ 234 (356)
..+.+|||+||+|.+|...+..+...|.+|++++++.++.. .+. .+. . . ..+ |..+..++.+.+ .+
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~-----~~ 81 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLR-ELEGGKERLILCKADLQDYEALKAAI-----DG 81 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHH-HhhCCCCcEEEEecCcCChHHHHHHH-----hc
Confidence 35779999999999999999999889999999988765422 122 221 1 1 112 333323333333 25
Q ss_pred ceEEEECCch
Q 042784 235 IDVYLDNVGG 244 (356)
Q Consensus 235 ~d~vld~~g~ 244 (356)
+|+||.+.+.
T Consensus 82 ~d~Vih~A~~ 91 (342)
T PLN02214 82 CDGVFHTASP 91 (342)
T ss_pred CCEEEEecCC
Confidence 8999998863
No 486
>PRK06436 glycerate dehydrogenase; Provisional
Probab=95.47 E-value=0.16 Score=45.77 Aligned_cols=86 Identities=23% Similarity=0.187 Sum_probs=60.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
.|.+|.|.|- |.+|...+++++.+|++|++.+++... .+.... + .++.+.+.+ .|+|+.+..
T Consensus 121 ~gktvgIiG~-G~IG~~vA~~l~afG~~V~~~~r~~~~-------~~~~~~--~---~~l~ell~~-----aDiv~~~lp 182 (303)
T PRK06436 121 YNKSLGILGY-GGIGRRVALLAKAFGMNIYAYTRSYVN-------DGISSI--Y---MEPEDIMKK-----SDFVLISLP 182 (303)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcc-------cCcccc--c---CCHHHHHhh-----CCEEEECCC
Confidence 5899999996 999999999999999999999875321 122211 1 234444433 799998876
Q ss_pred hh-----h-HHHHHHhcccCCEEEEEeccc
Q 042784 244 GK-----M-LEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 244 ~~-----~-~~~~~~~l~~~G~~v~~g~~~ 267 (356)
.. . -...+..++++..++.++...
T Consensus 183 ~t~~T~~li~~~~l~~mk~ga~lIN~sRG~ 212 (303)
T PRK06436 183 LTDETRGMINSKMLSLFRKGLAIINVARAD 212 (303)
T ss_pred CCchhhcCcCHHHHhcCCCCeEEEECCCcc
Confidence 42 1 246778899999888876643
No 487
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=95.46 E-value=0.11 Score=47.36 Aligned_cols=93 Identities=14% Similarity=0.138 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHH-HCCC-EEEEEeCChHHHHHHHHHh----CCCceeecCChhhHHHHHHHHCCCCce
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAK-LKGC-KVVGSTGSDDNVKLLKEEF----GYDDAFNYNSEMSFDAALTKYFPNGID 236 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~-~~G~-~V~~~~~s~~~~~~~~~~~----g~~~v~~~~~~~~~~~~i~~~~~~~~d 236 (356)
+...+++|.|+ |+.+.+.+..+. ..++ +|.+..++.++.+.+.+++ |.. +..+ .++.+.++ ++|
T Consensus 127 ~~~~~v~iiGa-G~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~---~~~~~av~-----~aD 196 (326)
T TIGR02992 127 EDSSVVAIFGA-GMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA---TDPRAAMS-----GAD 196 (326)
T ss_pred CCCcEEEEECC-CHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe---CCHHHHhc-----cCC
Confidence 44578999996 999988777665 5786 8999999988877665444 432 2222 23444443 489
Q ss_pred EEEECCchh--hHHHHHHhcccCCEEEEEeccc
Q 042784 237 VYLDNVGGK--MLEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 237 ~vld~~g~~--~~~~~~~~l~~~G~~v~~g~~~ 267 (356)
+|+.|++.. .+. ...++++-++..+|...
T Consensus 197 iVvtaT~s~~p~i~--~~~l~~g~~i~~vg~~~ 227 (326)
T TIGR02992 197 IIVTTTPSETPILH--AEWLEPGQHVTAMGSDA 227 (326)
T ss_pred EEEEecCCCCcEec--HHHcCCCcEEEeeCCCC
Confidence 999998864 332 23578888888787654
No 488
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.46 E-value=0.13 Score=45.43 Aligned_cols=96 Identities=16% Similarity=0.084 Sum_probs=68.3
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhH
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 223 (356)
-+||+....+..+....---.|.+|+|.|.+.-+|.-...++...|++|++..... .++
T Consensus 143 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T---------------------~~l 201 (287)
T PRK14176 143 LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFT---------------------DDL 201 (287)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccC---------------------CCH
Confidence 45666555665565332224799999999988899999999999999987765110 233
Q ss_pred HHHHHHHCCCCceEEEECCchhhHHHHHHhcccCCEEEEEecc
Q 042784 224 DAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMI 266 (356)
Q Consensus 224 ~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~ 266 (356)
.+.++ .+|+++-++|.+.+- --..++++..++.+|..
T Consensus 202 ~~~~~-----~ADIvv~AvG~p~~i-~~~~vk~gavVIDvGin 238 (287)
T PRK14176 202 KKYTL-----DADILVVATGVKHLI-KADMVKEGAVIFDVGIT 238 (287)
T ss_pred HHHHh-----hCCEEEEccCCcccc-CHHHcCCCcEEEEeccc
Confidence 33343 389999999987432 34588999999999874
No 489
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.46 E-value=0.34 Score=42.45 Aligned_cols=95 Identities=18% Similarity=0.125 Sum_probs=66.2
Q ss_pred HhCCCCCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCce
Q 042784 158 VLGQPKSGSNVFVSAAAGGVGMFAGQLAKLK-GCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGID 236 (356)
Q Consensus 158 ~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~-G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d 236 (356)
......++++||=.|+ |.|..+..+++.. +.+|++++.++...+.++ +.+.. ++. .+..+ +. ..+.||
T Consensus 23 ~~l~~~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~-~~~~~-~~~----~d~~~-~~--~~~~fD 91 (255)
T PRK14103 23 ARVGAERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAAR-ERGVD-ART----GDVRD-WK--PKPDTD 91 (255)
T ss_pred HhCCCCCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-hcCCc-EEE----cChhh-CC--CCCCce
Confidence 3455678899999984 4477788888775 679999999999888887 54443 222 12211 11 124799
Q ss_pred EEEECCch-------hhHHHHHHhcccCCEEEEE
Q 042784 237 VYLDNVGG-------KMLEAVLNHVNVHARIILC 263 (356)
Q Consensus 237 ~vld~~g~-------~~~~~~~~~l~~~G~~v~~ 263 (356)
+|+....- ..+..+.+.|+|+|.++..
T Consensus 92 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 92 VVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred EEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 99975531 2677888999999998864
No 490
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.45 E-value=0.12 Score=45.46 Aligned_cols=96 Identities=20% Similarity=0.123 Sum_probs=68.8
Q ss_pred cCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHH
Q 042784 145 LGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFD 224 (356)
Q Consensus 145 l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~ 224 (356)
+||+....+..+....---.|++|+|.|-+.-+|.-...++...|++|+..... + .++.
T Consensus 138 ~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~--------------------T-~~l~ 196 (278)
T PRK14172 138 LPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSK--------------------T-KNLK 196 (278)
T ss_pred cCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC--------------------C-CCHH
Confidence 456555555556543323469999999999999999999999999988765411 1 2333
Q ss_pred HHHHHHCCCCceEEEECCchhhHHHHHHhcccCCEEEEEeccc
Q 042784 225 AALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 225 ~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 267 (356)
+.+++ +|+|+-++|.+.+ ---..++++..++.+|...
T Consensus 197 ~~~~~-----ADIvIsAvGkp~~-i~~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 197 EVCKK-----ADILVVAIGRPKF-IDEEYVKEGAIVIDVGTSS 233 (278)
T ss_pred HHHhh-----CCEEEEcCCCcCc-cCHHHcCCCcEEEEeeccc
Confidence 33433 8999999998754 2345699999999998754
No 491
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=95.42 E-value=0.43 Score=42.43 Aligned_cols=106 Identities=16% Similarity=0.207 Sum_probs=71.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC----CceeecCChhh---HHHHHHHHC-CCC
Q 042784 163 KSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGY----DDAFNYNSEMS---FDAALTKYF-PNG 234 (356)
Q Consensus 163 ~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~----~~v~~~~~~~~---~~~~i~~~~-~~~ 234 (356)
-++..|+|+|.-+|.|...+.-+-..|++|++.+..++..+.++.+... ....|-.++++ ..+.+++.. .++
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 4567799999999999998888889999999999888777776644311 12344444333 333444544 347
Q ss_pred ceEEEECCchh------------hH---------------HHHHHhc-ccCCEEEEEecccc
Q 042784 235 IDVYLDNVGGK------------ML---------------EAVLNHV-NVHARIILCGMISQ 268 (356)
Q Consensus 235 ~d~vld~~g~~------------~~---------------~~~~~~l-~~~G~~v~~g~~~~ 268 (356)
.=.+++++|-. .+ +..+-++ +..|++|.++...+
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G 168 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG 168 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc
Confidence 88888988810 11 1222334 45699999988776
No 492
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=95.41 E-value=0.091 Score=46.31 Aligned_cols=101 Identities=17% Similarity=0.138 Sum_probs=66.4
Q ss_pred hCCCCCCCEEEEEcCCChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHhCC-----CceeecCChhhHHHHHHHHC
Q 042784 159 LGQPKSGSNVFVSAAAGGVGMFAGQLAKLKG--CKVVGSTGSDDNVKLLKEEFGY-----DDAFNYNSEMSFDAALTKYF 231 (356)
Q Consensus 159 ~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G--~~V~~~~~s~~~~~~~~~~~g~-----~~v~~~~~~~~~~~~i~~~~ 231 (356)
...++++++||=.|+ |.|..+..+++..| .+|++++.+++..+.+++.... ..-+.... .+ +.++.
T Consensus 68 ~~~~~~~~~VLDlGc--GtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~-~d----~~~lp 140 (261)
T PLN02233 68 WSGAKMGDRVLDLCC--GSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIE-GD----ATDLP 140 (261)
T ss_pred HhCCCCCCEEEEECC--cCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEE-cc----cccCC
Confidence 456788999999985 44667778888765 4999999999988888643220 00111110 11 11221
Q ss_pred --CCCceEEEECCch-------hhHHHHHHhcccCCEEEEEecc
Q 042784 232 --PNGIDVYLDNVGG-------KMLEAVLNHVNVHARIILCGMI 266 (356)
Q Consensus 232 --~~~~d~vld~~g~-------~~~~~~~~~l~~~G~~v~~g~~ 266 (356)
.+.||.|+-+.+- ..+.++.+.|+|+|+++.+...
T Consensus 141 ~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~ 184 (261)
T PLN02233 141 FDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN 184 (261)
T ss_pred CCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence 2469999865431 2688999999999999877554
No 493
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.40 E-value=0.14 Score=41.51 Aligned_cols=89 Identities=22% Similarity=0.156 Sum_probs=58.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCchh
Q 042784 166 SNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVGGK 245 (356)
Q Consensus 166 ~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~ 245 (356)
.+|.+.|. |.+|...+.-+...|.+|++.++++++.+.+. +.|+. .. .+..+.+.+ +|+||-|+.+.
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~-~~g~~-~~-----~s~~e~~~~-----~dvvi~~v~~~ 68 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALA-EAGAE-VA-----DSPAEAAEQ-----ADVVILCVPDD 68 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH-HTTEE-EE-----SSHHHHHHH-----BSEEEE-SSSH
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhH-Hhhhh-hh-----hhhhhHhhc-----ccceEeecccc
Confidence 36889996 99999988888889999999999999999888 55643 22 223333433 69999988763
Q ss_pred -hHHH------HHHhcccCCEEEEEeccc
Q 042784 246 -MLEA------VLNHVNVHARIILCGMIS 267 (356)
Q Consensus 246 -~~~~------~~~~l~~~G~~v~~g~~~ 267 (356)
.... .+..++++..++.++...
T Consensus 69 ~~v~~v~~~~~i~~~l~~g~iiid~sT~~ 97 (163)
T PF03446_consen 69 DAVEAVLFGENILAGLRPGKIIIDMSTIS 97 (163)
T ss_dssp HHHHHHHHCTTHGGGS-TTEEEEE-SS--
T ss_pred hhhhhhhhhhHHhhccccceEEEecCCcc
Confidence 3333 344566667777766544
No 494
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=95.38 E-value=0.51 Score=43.13 Aligned_cols=86 Identities=15% Similarity=0.164 Sum_probs=60.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
.|.+|.|.|. |.+|...++.++..|.+|++.+++++...... .+. .++.+.+. ..|+|+-++.
T Consensus 145 ~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~---------~~~--~~l~ell~-----~aDiVil~lP 207 (330)
T PRK12480 145 KNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFL---------TYK--DSVKEAIK-----DADIISLHVP 207 (330)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhh---------hcc--CCHHHHHh-----cCCEEEEeCC
Confidence 5779999996 99999999999999999999997765422111 011 23444343 3799998876
Q ss_pred hh------hHHHHHHhcccCCEEEEEecc
Q 042784 244 GK------MLEAVLNHVNVHARIILCGMI 266 (356)
Q Consensus 244 ~~------~~~~~~~~l~~~G~~v~~g~~ 266 (356)
.. .....+..++++..+|.++..
T Consensus 208 ~t~~t~~li~~~~l~~mk~gavlIN~aRG 236 (330)
T PRK12480 208 ANKESYHLFDKAMFDHVKKGAILVNAARG 236 (330)
T ss_pred CcHHHHHHHhHHHHhcCCCCcEEEEcCCc
Confidence 42 234566788998888877653
No 495
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.37 E-value=0.18 Score=44.67 Aligned_cols=97 Identities=21% Similarity=0.154 Sum_probs=69.2
Q ss_pred ccCchhhhHHHHHHHhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCceeecCChhhH
Q 042784 144 SLGIPGFAAWVGIEVLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKEEFGYDDAFNYNSEMSF 223 (356)
Q Consensus 144 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 223 (356)
-+||+....+..+....---.|.+|+|.|.|.-+|.-...++...|++|+... +. + .++
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~ch-s~-------------------t-~~l 195 (284)
T PRK14190 137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCH-SK-------------------T-KNL 195 (284)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEe-CC-------------------c-hhH
Confidence 35666555555565433225799999999999999999999999999988653 21 1 234
Q ss_pred HHHHHHHCCCCceEEEECCchhhHHHHHHhcccCCEEEEEeccc
Q 042784 224 DAALTKYFPNGIDVYLDNVGGKMLEAVLNHVNVHARIILCGMIS 267 (356)
Q Consensus 224 ~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 267 (356)
.+.+++ +|+|+-++|.+.+ ---+.++++..++.+|...
T Consensus 196 ~~~~~~-----ADIvI~AvG~p~~-i~~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 196 AELTKQ-----ADILIVAVGKPKL-ITADMVKEGAVVIDVGVNR 233 (284)
T ss_pred HHHHHh-----CCEEEEecCCCCc-CCHHHcCCCCEEEEeeccc
Confidence 444443 8999999998754 2245679999999998754
No 496
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=95.37 E-value=0.11 Score=44.77 Aligned_cols=77 Identities=19% Similarity=0.276 Sum_probs=48.5
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHH---HhCCC---ceeecCChhhHHHHHHHHC--CCCceEE
Q 042784 168 VFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSD-DNVKLLKE---EFGYD---DAFNYNSEMSFDAALTKYF--PNGIDVY 238 (356)
Q Consensus 168 VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~-~~~~~~~~---~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d~v 238 (356)
+||+|++|++|..+++.+...|++|++++++. ++.+...+ ..|.. ...|..+...+.+.+.++. -+++|.|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999988888899999988764 33222211 33432 1234444333333333321 1468999
Q ss_pred EECCch
Q 042784 239 LDNVGG 244 (356)
Q Consensus 239 ld~~g~ 244 (356)
+.+.|.
T Consensus 81 i~~ag~ 86 (239)
T TIGR01830 81 VNNAGI 86 (239)
T ss_pred EECCCC
Confidence 998874
No 497
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.35 E-value=0.087 Score=44.21 Aligned_cols=99 Identities=9% Similarity=0.102 Sum_probs=60.9
Q ss_pred HhCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---HhCCCceeecCChhhHHHHHHHHCCCC
Q 042784 158 VLGQPKSGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDNVKLLKE---EFGYDDAFNYNSEMSFDAALTKYFPNG 234 (356)
Q Consensus 158 ~~~~~~~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~~~ 234 (356)
......++.+||-.|+ |.|..+..+++ .|.+|++++.++.-.+.+++ ..+.. +.... .+... ..+ .+.
T Consensus 24 ~~~~~~~~~~vLDiGc--G~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~-~d~~~--~~~-~~~ 94 (195)
T TIGR00477 24 EAVKTVAPCKTLDLGC--GQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDA-YDINA--AAL-NED 94 (195)
T ss_pred HHhccCCCCcEEEeCC--CCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEe-ccchh--ccc-cCC
Confidence 3344455678999884 66777888877 48899999999887766542 22322 11110 11110 011 246
Q ss_pred ceEEEECC-----ch----hhHHHHHHhcccCCEEEEEec
Q 042784 235 IDVYLDNV-----GG----KMLEAVLNHVNVHARIILCGM 265 (356)
Q Consensus 235 ~d~vld~~-----g~----~~~~~~~~~l~~~G~~v~~g~ 265 (356)
+|+|+.+. .. ..+..+.+.|+|+|.++.+..
T Consensus 95 fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~~ 134 (195)
T TIGR00477 95 YDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVAA 134 (195)
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence 99998642 21 267788889999999665543
No 498
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=95.34 E-value=0.16 Score=44.20 Aligned_cols=81 Identities=22% Similarity=0.283 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHhC----CCce---eecCC-hhhHHHHHHHHC--
Q 042784 164 SGSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSDDN--VKLLKEEFG----YDDA---FNYNS-EMSFDAALTKYF-- 231 (356)
Q Consensus 164 ~g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~~~--~~~~~~~~g----~~~v---~~~~~-~~~~~~~i~~~~-- 231 (356)
.+.++||+|+++++|.+++..+...|++|+++.+..+. .+.+.+... .... .|..+ ..+....+.++.
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~ 83 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE 83 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999888887999998777766543 333332222 1111 34443 333333333322
Q ss_pred CCCceEEEECCch
Q 042784 232 PNGIDVYLDNVGG 244 (356)
Q Consensus 232 ~~~~d~vld~~g~ 244 (356)
-+++|+++.+.|.
T Consensus 84 ~g~id~lvnnAg~ 96 (251)
T COG1028 84 FGRIDILVNNAGI 96 (251)
T ss_pred cCCCCEEEECCCC
Confidence 2459999998873
No 499
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=95.34 E-value=0.11 Score=44.89 Aligned_cols=76 Identities=16% Similarity=0.173 Sum_probs=47.5
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHH---hCCC---ceeecCChhhHHHHHHHHC--CCCceEE
Q 042784 168 VFVSAAAGGVGMFAGQLAKLKGCKVVGSTGSD-DNVKLLKEE---FGYD---DAFNYNSEMSFDAALTKYF--PNGIDVY 238 (356)
Q Consensus 168 VlV~g~~g~vG~~~i~la~~~G~~V~~~~~s~-~~~~~~~~~---~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d~v 238 (356)
++|+|++|++|..+++.+...|++|++++++. ++.+.+.++ .+.. ...|..+..++.+.+.+.. .+.+|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 58999999999999999989999998887553 333332222 2322 1234444334433333321 2468999
Q ss_pred EECCc
Q 042784 239 LDNVG 243 (356)
Q Consensus 239 ld~~g 243 (356)
+.+.|
T Consensus 81 i~~ag 85 (239)
T TIGR01831 81 VLNAG 85 (239)
T ss_pred EECCC
Confidence 88876
No 500
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=95.34 E-value=0.19 Score=45.66 Aligned_cols=87 Identities=21% Similarity=0.133 Sum_probs=58.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHhCCCceeecCChhhHHHHHHHHCCCCceEEEECCc
Q 042784 165 GSNVFVSAAAGGVGMFAGQLAKLKGCKVVGSTG-SDDNVKLLKEEFGYDDAFNYNSEMSFDAALTKYFPNGIDVYLDNVG 243 (356)
Q Consensus 165 g~~VlV~g~~g~vG~~~i~la~~~G~~V~~~~~-s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vld~~g 243 (356)
|+||-|+|. |.+|...++.++.+|.+|++.++ +.+.... ..+.. -. .++.+-+.+ .|++.-.+.
T Consensus 142 gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~---~~~~~---~~---~~Ld~lL~~-----sDiv~lh~P 206 (324)
T COG0111 142 GKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAG---VDGVV---GV---DSLDELLAE-----ADILTLHLP 206 (324)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhc---cccce---ec---ccHHHHHhh-----CCEEEEcCC
Confidence 789999997 99999999999999999999997 2222221 11221 11 335555544 788877655
Q ss_pred h--h----hHHHHHHhcccCCEEEEEecc
Q 042784 244 G--K----MLEAVLNHVNVHARIILCGMI 266 (356)
Q Consensus 244 ~--~----~~~~~~~~l~~~G~~v~~g~~ 266 (356)
- + .-...+..|+++..++.++..
T Consensus 207 lT~eT~g~i~~~~~a~MK~gailIN~aRG 235 (324)
T COG0111 207 LTPETRGLINAEELAKMKPGAILINAARG 235 (324)
T ss_pred CCcchhcccCHHHHhhCCCCeEEEECCCc
Confidence 3 1 224667788888877776553
Done!