Your job contains 1 sequence.
>042785
VVAQKLKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKIKKLMP
MDAESRVYDALQKKYLKTLLFCVCEAVEGPMIEEYAFSFSYSDSDSQEISMNINRTGNKK
KGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVDY
EPPFFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKVKSVLDPCEDENDDMQDDEVS
LGADSVQRDESSDSDSEVSQPQEDQYIVAPIVEVTMVILADKQQPEEDNGMVDEDNTQDP
EEDEQQLVRVKDWINCRHLHSVELTDVLSNFPDISVLVKEGLLSKGGKDTYTINKQEKFN
YEFALVKEEMDGVTLCDKSPQLDDQIYMKALYYALSMNYVTIAKLQKKLDKEANQSTVRK
LIDKMIREGYVEAKGSRRLGKRVIHSTLTKKKLMEAKKALDIDFMEIETNEPLNKSDHQE
FRKIGSKHMDTSTCGLLHSVGSDVTRTKGRSDIHQSGSFRSEQAISKAKVGNTPTSRAGP
VASRESFAPGNEKIRTNGSTNNCDEVDDIMCSRSTQDKRLRKTSTVKEPILQQVKRQKSL
AMCV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042785
(604 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2019569 - symbol:ASY1 "AT1G67370" species:3702... 1738 5.0e-179 1
UNIPROTKB|Q76CY8 - symbol:OsASY1 "Essential protein for m... 1447 3.4e-148 1
TAIR|locus:2116510 - symbol:ASY2 "AT4G32200" species:3702... 341 5.5e-52 3
UNIPROTKB|H9L0N5 - symbol:HORMAD1 "Uncharacterized protei... 230 2.0e-16 1
UNIPROTKB|Q5M7C8 - symbol:hormad1 "HORMA domain-containin... 216 1.5e-15 2
RGD|1564960 - symbol:Hormad1 "HORMA domain containing 1" ... 224 2.0e-15 2
ZFIN|ZDB-GENE-040718-49 - symbol:hormad1 "HORMA domain co... 216 4.9e-15 1
MGI|MGI:1915231 - symbol:Hormad1 "HORMA domain containing... 212 5.1e-15 2
UNIPROTKB|E1C2C4 - symbol:HORMAD2 "Uncharacterized protei... 200 4.6e-14 1
UNIPROTKB|Q86X24 - symbol:HORMAD1 "HORMA domain-containin... 207 8.3e-14 1
UNIPROTKB|E2IUK4 - symbol:HORMAD1 "HORMA domain-containin... 206 1.1e-13 1
UNIPROTKB|F1SS82 - symbol:HORMAD1 "HORMA domain-containin... 206 1.1e-13 1
UNIPROTKB|Q4R8B9 - symbol:HORMAD1 "HORMA domain-containin... 209 1.3e-13 2
ZFIN|ZDB-GENE-060312-39 - symbol:zte38 "zebrafish testis-... 199 1.9e-13 1
UNIPROTKB|E2RSQ2 - symbol:HORMAD1 "HORMA domain-containin... 205 2.5e-13 2
UNIPROTKB|Q2KIY6 - symbol:HORMAD1 "HORMA domain-containin... 196 1.4e-12 1
UNIPROTKB|E2QXH7 - symbol:HORMAD2 "HORMA domain-containin... 191 1.8e-12 1
MGI|MGI:1923078 - symbol:Hormad2 "HORMA domain containing... 189 3.2e-12 1
UNIPROTKB|F1RFE9 - symbol:HORMAD2 "Uncharacterized protei... 183 7.7e-12 1
UNIPROTKB|A6QQY4 - symbol:HORMAD2 "HORMA domain-containin... 181 2.8e-11 1
UNIPROTKB|F1MS88 - symbol:HORMAD2 "HORMA domain-containin... 177 8.4e-11 1
UNIPROTKB|Q8N7B1 - symbol:HORMAD2 "HORMA domain-containin... 173 2.5e-10 1
CGD|CAL0004050 - symbol:orf19.3306 species:5476 "Candida ... 164 2.3e-08 2
ASPGD|ASPL0000031244 - symbol:AN5516 species:162425 "Emer... 111 1.4e-05 3
SGD|S000001334 - symbol:HOP1 "Meiosis-specific protein re... 133 2.9e-05 1
RGD|1565447 - symbol:Hormad2 "HORMA domain containing 2" ... 121 4.2e-05 1
>TAIR|locus:2019569 [details] [associations]
symbol:ASY1 "AT1G67370" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0007129 "synapsis"
evidence=RCA;IDA;IMP] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0051026 "chiasma assembly" evidence=IMP]
[GO:0000785 "chromatin" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005694 "chromosome" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=RCA] [GO:0007062 "sister
chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0010212 "response to ionizing radiation"
evidence=RCA] [GO:0010332 "response to gamma radiation"
evidence=RCA] [GO:0032204 "regulation of telomere maintenance"
evidence=RCA] [GO:0032504 "multicellular organism reproduction"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] InterPro:IPR007526
PROSITE:PS50934 InterPro:IPR003511 Pfam:PF02301 EMBL:CP002684
GO:GO:0005654 GO:GO:0003677 GO:GO:0000785 GO:GO:0000794
GO:GO:0009556 GO:GO:0051026 GO:GO:0009554 GO:GO:0000237
PROSITE:PS50815 Gene3D:3.30.900.10 SUPFAM:SSF56019 GO:GO:0000238
IPI:IPI00531496 RefSeq:NP_564896.1 UniGene:At.14755
UniGene:At.68620 ProteinModelPortal:F4HRV8 PRIDE:F4HRV8
EnsemblPlants:AT1G67370.1 GeneID:843058 KEGG:ath:AT1G67370
OMA:SEQTISK Uniprot:F4HRV8
Length = 596
Score = 1738 (616.9 bits), Expect = 5.0e-179, P = 5.0e-179
Identities = 376/623 (60%), Positives = 444/623 (71%)
Query: 1 VVAQKLKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKIKKLMP 60
V+AQKLKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPE YFNDKSVPAL+MKIKKLMP
Sbjct: 2 VMAQKLKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALDMKIKKLMP 61
Query: 61 MDAESR---------VYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISM 111
MDAESR VYDALQ+KYLKTL+F +CE V+GPMI Q++ M
Sbjct: 62 MDAESRRLIDWMEKGVYDALQRKYLKTLMFSICETVDGPMIEEYSFSFSYSDSDSQDVMM 121
Query: 112 NINRTGNKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFY 171
NINRTGNKK GG F N+T +IT QMRSSACKMVRTLVQLMRTLD+MP+ERTI+MKL Y
Sbjct: 122 NINRTGNKKNGGIF--NSTADITPNQMRSSACKMVRTLVQLMRTLDKMPDERTIVMKLLY 179
Query: 172 YDDVTPVDYEPPFFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKVKSVLDPCEDEN 231
YDDVTP DYEPPFFR C+E+EA WTKNPL+ME+GNVNSKH VL LKVKSVLDPCEDEN
Sbjct: 180 YDDVTPPDYEPPFFRGCTEDEAQYVWTKNPLRMEIGNVNSKHLVLTLKVKSVLDPCEDEN 239
Query: 232 DDMQDDEVSLGAXXXXXXXXXXXXXXXXXXXXXXYIVAPIVEVTMVILADKQQPEEDNGM 291
DDMQDD S+G +IVAP+ +KQ ++D+G
Sbjct: 240 DDMQDDGKSIGPDSVHDDQPSDSDSEISQTQENQFIVAPV---------EKQ--DDDDGE 288
Query: 292 VDED-NTQDPEEDEQQLVRVKDWINCRHLHSVELTDVLSNFPDISV---------LVKEG 341
VDED NTQDP E+EQQL RVKDWIN RHL ++ELTD+L+NFPDIS+ LV EG
Sbjct: 289 VDEDDNTQDPAENEQQLARVKDWINSRHLDTLELTDILANFPDISIVLSEEIMDQLVTEG 348
Query: 342 LLSKGGKDTYTINKQEKF-NYEFALVKEEMDGVTLCDKSPQLDDQIYMKALYYALSMNYV 400
+LSK GKD Y I K++K EF VKEE DG KS +D +YMKALY++L M YV
Sbjct: 349 VLSKTGKDMY-IKKRDKTPESEFTFVKEEADGQISPGKSVAPEDYLYMKALYHSLPMKYV 407
Query: 401 TIAKLQKKLDKEANQSTVRKLIDKMIREGYVEAKGSRRLGKRVIHSTLTKKKLMEAKKAL 460
TI KL LD EANQ+ VRKL+D+M +EGYVEA +RRLGKRVIHS+LT+KKL E +K L
Sbjct: 408 TITKLHNMLDGEANQTAVRKLMDRMTQEGYVEASSNRRLGKRVIHSSLTEKKLNEVRKVL 467
Query: 461 DIDFMEIETNEPLNKSDHQEFRKIGSKHMDTSTCGLLHSVGSDVTRTKGRSD-IHQSGSF 519
D M+++ E +NK++ + K+ + D STCG +HS+GSD TRTKGRS + Q+GS
Sbjct: 468 ATDDMDVDVTETINKTNGPD-AKVTA---DVSTCGGIHSIGSDFTRTKGRSGGMQQNGSV 523
Query: 520 RSEQAISKAKVGNTPTS-RAGPVASRESFAPGNEKIRTNGSTNNCDEVDDIMCSRSTQDK 578
SEQ ISKA GNTP S +A P ASRESFA ++ E + + CS+++QD+
Sbjct: 524 LSEQTISKA--GNTPISNKAQPAASRESFAVHGGAVK---------EAETVNCSQASQDR 572
Query: 579 RLRKTSTVKEPILQQVKRQKSLA 601
R RKTS V+EPILQ KRQKS A
Sbjct: 573 RGRKTSMVREPILQYSKRQKSQA 595
>UNIPROTKB|Q76CY8 [details] [associations]
symbol:OsASY1 "Essential protein for meiotic synapsis"
species:39947 "Oryza sativa Japonica Group" [GO:0000228 "nuclear
chromosome" evidence=IDA] [GO:0000237 "leptotene" evidence=IDA]
[GO:0000238 "zygotene" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0007129 "synapsis" evidence=IDA] [GO:0009554
"megasporogenesis" evidence=IDA] [GO:0009556 "microsporogenesis"
evidence=IDA] InterPro:IPR003511 Pfam:PF02301 GO:GO:0000794
GO:GO:0000228 GO:GO:0009556 GO:GO:0051026 GO:GO:0007129
GO:GO:0009554 GO:GO:0000237 PROSITE:PS50815 Gene3D:3.30.900.10
SUPFAM:SSF56019 GO:GO:0000238 OMA:SEQTISK EMBL:AB109238
ProteinModelPortal:Q76CY8 STRING:Q76CY8 KEGG:dosa:Os09t0506800-01
Gramene:Q76CY8 HOGENOM:HOG000083661 Uniprot:Q76CY8
Length = 610
Score = 1447 (514.4 bits), Expect = 3.4e-148, P = 3.4e-148
Identities = 333/627 (53%), Positives = 407/627 (64%)
Query: 1 VVAQKLKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKIKKLMP 60
V+AQK KEAEITEQDSLLLTRNLLRIAI+NISYIRGLFPE YFNDKSVPALEMKIKKLMP
Sbjct: 2 VMAQKTKEAEITEQDSLLLTRNLLRIAIYNISYIRGLFPEKYFNDKSVPALEMKIKKLMP 61
Query: 61 MDAESR---------VYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISM 111
MD ESR VYDALQKKYLKTLLFC+CE EGPMI E++M
Sbjct: 62 MDTESRRLIDWMEKGVYDALQKKYLKTLLFCICEKEEGPMIEEYAFSFSYPNTSGDEVAM 121
Query: 112 NINRTGNKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFY 171
N++RTG+KK TFK N E+T QMRSSACKM+RTLV LMRTLD+MPEERTILMKL Y
Sbjct: 122 NLSRTGSKKNSATFKSNAA-EVTPDQMRSSACKMIRTLVSLMRTLDQMPEERTILMKLLY 180
Query: 172 YDDVTPVDYEPPFFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKVKSVLDPCEDEN 231
YDDVTP DYEPPFF+CC++ EA N W KNPLKMEVGNVNSKH VLALKVKSVLDPC+D N
Sbjct: 181 YDDVTPEDYEPPFFKCCADNEAINIWNKNPLKMEVGNVNSKHLVLALKVKSVLDPCDDNN 240
Query: 232 DDMQDDEVSLGAXXXXXXXXXXXXXXXXXXXXXXYIVAPIVEVTMVILADKQQPEEDNGM 291
+ +DD +SL YIVAP + T K Q NG
Sbjct: 241 VNSEDDNMSLD--NESDQDNDFSDTEVRPSEAERYIVAPN-DGTC-----KGQ----NGT 288
Query: 292 VDEDNTQDPEEDEQQLVRVKDWINCRHLHSVELTDVLSNFPDISV---------LVKEGL 342
+ ED+TQDP +E+ +V++WI R S+E++DVL NFPDIS+ L+K+GL
Sbjct: 289 ISEDDTQDPVHEEELTAQVREWICSRDTESLEVSDVLVNFPDISMEMVEDIMERLLKDGL 348
Query: 343 LSKGGKDTYTINKQEKFNYEFALVKEE--MDGVTLCDKSPQLD-DQIYMKALYYALSMNY 399
LS+ KD+Y++NK +K+E M V+ + + + D +YMKALY+AL M+Y
Sbjct: 349 LSRAKKDSYSVNKIADPTTPH--IKKEVIMQNVSPTEGTKNSNGDLMYMKALYHALPMDY 406
Query: 400 VTIAKLQKKLDKEANQSTVRKLIDKMIREGYVEAKGSRRLGKRVIHSTLTKKKLMEAKKA 459
V++ KL KLD EA+Q+ VRKLI+KM+++GYV+ +RRLGK VIHS +T +KL+E KK
Sbjct: 407 VSVGKLHGKLDGEASQNMVRKLIEKMVQDGYVKNSANRRLGKAVIHSEVTNRKLLEIKKI 466
Query: 460 LDIDFME---IETNEPLNKSDHQEFRKIGSKHMDTSTCGLLHSVGSDVTRTKGRSDIHQS 516
L++D E I+TN + + ++ G + D ST G L SVGSD+TRT+ + Q+
Sbjct: 467 LEVDIAEQMAIDTNAEPGEPERKDHLS-GHEMRDGSTMGCLQSVGSDLTRTRELPEPQQN 525
Query: 517 GSFRSEQAISKAKV--GNTPTS--RAGPVASRESFAPGNEKIRTNGSTNNCDEVDDIMCS 572
S +S Q S TPTS V S ES G +K+R + CS
Sbjct: 526 VSMQSGQEASTVDKDPSRTPTSVREQASVCSLESGVLG-QKVR-----KSLAGAGGTQCS 579
Query: 573 RSTQDKRLRKTSTVKEPILQQVKRQKS 599
QDKR RK STVKEPILQ VKRQKS
Sbjct: 580 ---QDKRFRKASTVKEPILQYVKRQKS 603
>TAIR|locus:2116510 [details] [associations]
symbol:ASY2 "AT4G32200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0007130 "synaptonemal complex assembly"
evidence=TAS] InterPro:IPR003511 Pfam:PF02301 EMBL:CP002687
GO:GO:0003677 GO:GO:0007130 PROSITE:PS50815 SUPFAM:SSF56019
IPI:IPI00531453 RefSeq:NP_194947.2 UniGene:At.54575
ProteinModelPortal:F4JTJ9 PRIDE:F4JTJ9 EnsemblPlants:AT4G32200.1
GeneID:829353 KEGG:ath:AT4G32200 Uniprot:F4JTJ9
Length = 1399
Score = 341 (125.1 bits), Expect = 5.5e-52, Sum P(3) = 5.5e-52
Identities = 75/140 (53%), Positives = 89/140 (63%)
Query: 13 EQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKIKKLMPMDAESR------ 66
EQ SL+LT LLR AIFNISYIRGLFP YF D SVPAL++K+KKLMPMDAESR
Sbjct: 9 EQQSLILTTELLRTAIFNISYIRGLFPVRYFKDMSVPALDLKMKKLMPMDAESRRLIGWM 68
Query: 67 ---VYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNKKKGG 123
VYDAL KK+LK L+F +CE V+GP+I Q++ MNIN TG GG
Sbjct: 69 EKGVYDALHKKHLKKLIFYICETVDGPLIEEYIFSFSYSDSDSQDVRMNINITGINTYGG 128
Query: 124 TFKC---NTTTEITTTQMRS 140
T N+T ++T QM S
Sbjct: 129 TLNSTADNSTADMTLNQMSS 148
Score = 287 (106.1 bits), Expect = 5.5e-52, Sum P(3) = 5.5e-52
Identities = 59/85 (69%), Positives = 67/85 (78%)
Query: 162 ERTILMKLFYYDDVTPVDYEPPFFRCCSEEE-AHNPWTKNPLKMEVGNVNSKHFVLALKV 220
+RTILMKL YY+ V P DY+PPFFR CSEEE A W K PL+ME+GNVNS+H VL +KV
Sbjct: 190 QRTILMKLLYYEYVPP-DYQPPFFRGCSEEEEAQYVWPKIPLRMEIGNVNSQHHVLTVKV 248
Query: 221 KSVLDP---CEDENDDMQDDEVSLG 242
KSVLDP CEDEND+MQDDE S G
Sbjct: 249 KSVLDPYDPCEDENDNMQDDERSKG 273
Score = 38 (18.4 bits), Expect = 5.5e-52, Sum P(3) = 5.5e-52
Identities = 17/71 (23%), Positives = 30/71 (42%)
Query: 413 ANQSTVRKLIDKMIREGYVEAKGSRRLGKRVIHSTLTKKKLMEAKKALDID--FMEIETN 470
+N+ + L+D+ REG + G + + L++ + A + + E E N
Sbjct: 631 SNRIEIPTLLDEPDREG---SGGHLAAPEDPVDFLAQFDPLIDLEDAYNTQPQYTEAEVN 687
Query: 471 EPLNKSDHQEF 481
L DH EF
Sbjct: 688 ARLLHEDHVEF 698
Score = 37 (18.1 bits), Expect = 7.0e-52, Sum P(3) = 7.0e-52
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 564 DEVDDIMCSRSTQDKRLRKTSTVKEPILQ 592
D+V+ + +D + R S V+ PILQ
Sbjct: 326 DQVEHQLAK--VKDTKGRPASIVQNPILQ 352
>UNIPROTKB|H9L0N5 [details] [associations]
symbol:HORMAD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051177
"meiotic sister chromatid cohesion" evidence=IEA] [GO:0051598
"meiotic recombination checkpoint" evidence=IEA] [GO:0060629
"regulation of homologous chromosome segregation" evidence=IEA]
InterPro:IPR003511 Pfam:PF02301 PROSITE:PS50815
GeneTree:ENSGT00390000018130 Gene3D:3.30.900.10 SUPFAM:SSF56019
EMBL:AADN02015897 Ensembl:ENSGALT00000023614 OMA:KEGECEG
Uniprot:H9L0N5
Length = 394
Score = 230 (86.0 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 70/232 (30%), Positives = 112/232 (48%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPEN-----YFNDKSVPALEMKIKKLMPMDAES- 65
TEQ SL L + LL +A+ I+Y+RG+FPE+ YF+D SV L + K P +
Sbjct: 22 TEQQSLTLVKRLLAVAVSCITYLRGIFPESAYGTRYFDDLSVKIL--REDKNCPGSTQLV 79
Query: 66 ----RVYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNKKK 121
YDALQKKYL+ ++ V + P + +N + + NK+
Sbjct: 80 KWMLGCYDALQKKYLRMVVLAVYTHPDDPQTITECYHFKFKYAPNGPV-LNFS-SKNKQS 137
Query: 122 GGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVDYE 181
C T + ++ ++R + LM+ L +P + MKLFYYD+VTP DY+
Sbjct: 138 DSPISCADT--------KKASILLIRKIYVLMQNLGPLPNNVCLTMKLFYYDEVTPPDYQ 189
Query: 182 PPFFRCCSEEEAHNP-WTKNPLKMEVGNVNSKHFVLALKV---KSVLDPCED 229
PP F+ E E + P+ + +G V + +L +KV K ++ C++
Sbjct: 190 PPGFK---EGECEGMIFEGEPMYLNMGEVPTPFHMLKVKVTTDKQRIESCDE 238
>UNIPROTKB|Q5M7C8 [details] [associations]
symbol:hormad1 "HORMA domain-containing protein 1"
species:8355 "Xenopus laevis" [GO:0001824 "blastocyst development"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005694
"chromosome" evidence=ISS] [GO:0007126 "meiosis" evidence=ISS]
[GO:0007130 "synaptonemal complex assembly" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0042138 "meiotic
DNA double-strand break formation" evidence=ISS] [GO:0048477
"oogenesis" evidence=ISS] [GO:0051177 "meiotic sister chromatid
cohesion" evidence=ISS] [GO:0051598 "meiotic recombination
checkpoint" evidence=ISS] [GO:0060629 "regulation of homologous
chromosome segregation" evidence=ISS] InterPro:IPR003511
Pfam:PF02301 GO:GO:0005634 GO:GO:0005694 GO:GO:0030154
GO:GO:0048477 GO:GO:0007283 GO:GO:0007130 GO:GO:0001824
GO:GO:0051598 GO:GO:0042138 PROSITE:PS50815 SUPFAM:SSF56019
CTD:84072 HOVERGEN:HBG074209 GO:GO:0051177 GO:GO:0060629
EMBL:BC088705 RefSeq:NP_001088894.1 UniGene:Xl.50044
ProteinModelPortal:Q5M7C8 GeneID:496240 KEGG:xla:496240
Xenbase:XB-GENE-986781 Uniprot:Q5M7C8
Length = 386
Score = 216 (81.1 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 65/227 (28%), Positives = 109/227 (48%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKI---KKLMPMDAES--- 65
TE SL+L + LL +++ I+Y+RGLFPE + + + + +KI K P +
Sbjct: 22 TETQSLILVKRLLAVSVSCITYLRGLFPEYAYGTRYLDDICVKILREDKSCPGSTQLVKW 81
Query: 66 --RVYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNKKKGG 123
YDALQKKYL+ ++ + E P + +G
Sbjct: 82 MLGCYDALQKKYLRMVMLAIYTDPEDPQ----------TVTECYQFKFKYTASGPVMD-- 129
Query: 124 TFKCNTTTEITT-TQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVDYEP 182
F N + ++T + + ++ ++R L LM+ L +P + + MKLFYYD+VTP DY+P
Sbjct: 130 -FVSNNSNSVSTCSDAKKTSILLIRKLYILMQNLGPLPNDVCLTMKLFYYDEVTPADYQP 188
Query: 183 PFFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKVKSVLDPCED 229
P F+ + E + P+ + VG V + VL +KV + + E+
Sbjct: 189 PGFKEGTCEGLM--FEGEPMYLNVGEVATPFHVLKVKVTTEKERMEN 233
Score = 47 (21.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 11/48 (22%), Positives = 28/48 (58%)
Query: 281 DKQQPEED-NGMVDEDNTQDPEEDEQQLVRVKDW-INCRHLHSVELTD 326
D+++P+ N + +DN D + D+ + ++V+D + C+ +++ D
Sbjct: 250 DEEKPDLSINDDLAQDNNGDRKRDDIETLKVEDLNLTCQEDGNLQSDD 297
>RGD|1564960 [details] [associations]
symbol:Hormad1 "HORMA domain containing 1" species:10116 "Rattus
norvegicus" [GO:0001824 "blastocyst development" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005694 "chromosome"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0007126
"meiosis" evidence=ISS] [GO:0007130 "synaptonemal complex assembly"
evidence=ISO;ISS] [GO:0007283 "spermatogenesis" evidence=ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042138
"meiotic DNA double-strand break formation" evidence=ISO;ISS]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA;ISO]
[GO:0048477 "oogenesis" evidence=ISO;ISS] [GO:0051177 "meiotic
sister chromatid cohesion" evidence=ISO;ISS] [GO:0051598 "meiotic
recombination checkpoint" evidence=ISO;ISS] [GO:0060629 "regulation
of homologous chromosome segregation" evidence=ISO;ISS]
InterPro:IPR003511 RGD:1564960 Pfam:PF02301 GO:GO:0005634
GO:GO:0005694 GO:GO:0030154 GO:GO:0048477 GO:GO:0007283
GO:GO:0045111 GO:GO:0007130 GO:GO:0001824 GO:GO:0051598
GO:GO:0042138 PROSITE:PS50815 GeneTree:ENSGT00390000018130
Gene3D:3.30.900.10 SUPFAM:SSF56019 CTD:84072 GO:GO:0051177
GO:GO:0060629 OrthoDB:EOG4RXZ0B EMBL:CH474015 IPI:IPI00948876
RefSeq:NP_001102419.1 UniGene:Rn.218539 Ensembl:ENSRNOT00000066821
GeneID:365868 KEGG:rno:365868 NextBio:688223 Uniprot:D3ZWE7
Length = 392
Score = 224 (83.9 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 67/226 (29%), Positives = 109/226 (48%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKI-KKLMPMDAESRV--- 67
TEQ SL+ + LL +++ I+Y+RG+FPE + + + L +KI K+ S++
Sbjct: 23 TEQQSLMFVKRLLAVSVSCITYLRGIFPERAYGTRYLDDLCVKILKEDKNCPGSSQLVKW 82
Query: 68 ----YDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNKKKGG 123
YDALQKKYL+ ++ V E P I I++ N K
Sbjct: 83 MLGCYDALQKKYLRMIILAVYTNPEDPQTISECYQFKFKYTKNGPIMDFISKNQNNK--- 139
Query: 124 TFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVDYEPP 183
++TT T + ++ ++R + LM+ L +P + + MKLFYYD+VTP DY+PP
Sbjct: 140 ----SSTTSADT---KKASILLIRKIYVLMQNLGPLPNDVCLTMKLFYYDEVTPPDYQPP 192
Query: 184 FFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKVKSVLDPCED 229
F+ E + +P + VG V + LKV + + E+
Sbjct: 193 GFKDGDCEGVI--FDGDPTYLNVGEVPTPFHTFRLKVTTEKERMEN 236
Score = 37 (18.1 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 278 ILADKQQPEEDNGMVDEDNTQDPEEDEQQ-LVRVKDW-INCRHLHSVELTDVLSNFPDIS 335
IL DK E++N + T+ E++E +K+ ++C+ ++ S+ IS
Sbjct: 254 ILMDKDDVEDENHNNFDIKTKMNEQNENSGTSEIKEPNLDCKEEEIMQFKKNQSS--SIS 311
Query: 336 VLVKEGLLSK 345
E L+SK
Sbjct: 312 QCQVEQLISK 321
>ZFIN|ZDB-GENE-040718-49 [details] [associations]
symbol:hormad1 "HORMA domain containing 1"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007283 "spermatogenesis" evidence=IEA;ISS]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=ISS] [GO:0001824 "blastocyst development" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0005694 "chromosome"
evidence=IEA;ISS] [GO:0007130 "synaptonemal complex assembly"
evidence=ISS] [GO:0060629 "regulation of homologous chromosome
segregation" evidence=ISS] [GO:0048477 "oogenesis"
evidence=IEA;ISS] [GO:0051177 "meiotic sister chromatid cohesion"
evidence=ISS] [GO:0051598 "meiotic recombination checkpoint"
evidence=ISS] [GO:0007126 "meiosis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] InterPro:IPR003511 Pfam:PF02301
ZFIN:ZDB-GENE-040718-49 GO:GO:0005634 GO:GO:0005694 GO:GO:0030154
GO:GO:0048477 GO:GO:0007283 GO:GO:0007130 GO:GO:0001824
GO:GO:0051598 GO:GO:0042138 PROSITE:PS50815 eggNOG:NOG279197
GeneTree:ENSGT00390000018130 Gene3D:3.30.900.10 SUPFAM:SSF56019
CTD:84072 HOGENOM:HOG000293366 HOVERGEN:HBG074209 GO:GO:0051177
GO:GO:0060629 EMBL:BX248517 EMBL:BC075898 IPI:IPI00498935
RefSeq:NP_001002357.1 UniGene:Dr.85188 Ensembl:ENSDART00000058888
GeneID:436630 KEGG:dre:436630 InParanoid:A2BF66 OMA:QDYQPPG
OrthoDB:EOG4RXZ0B NextBio:20831075 Bgee:A2BF66 Uniprot:A2BF66
Length = 356
Score = 216 (81.1 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 63/238 (26%), Positives = 114/238 (47%)
Query: 4 QKLKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKIKKLMPMDA 63
Q L + EQ SL+L + LL IAI +I+Y+RGLF E + K V L++ I +
Sbjct: 14 QMLPDVVSNEQQSLVLVKKLLAIAISSITYLRGLFSEKAYGRKYVGELKVYILREDSCPG 73
Query: 64 ESRV-------YDALQKKYLKTLLFCV-CEAVEGPMIXXXXXXXXXXXXXXQEISMNINR 115
++ +DALQ++YL+ +L + C+ + ++
Sbjct: 74 AQQIVHWLQGCFDALQRRYLRMVLLSIYCDPDNPQKVTECYQFKIKYTEKGPQMDF---- 129
Query: 116 TGNKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDV 175
+ K G + T++ + S+ +VR L LM+ L +P++ + MKL YYD+V
Sbjct: 130 ---ESKNG----QSLTKMACDNTQKSSMLLVRKLYMLMQNLGPLPDDVCLNMKLLYYDEV 182
Query: 176 TPVDYEPPFFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKV---KSVLDPCEDE 230
TP +Y+PP F+ ++ + + P+ + +G V + + + V K ++P ED+
Sbjct: 183 TPQEYQPPGFK--EDDNGTLMFEREPVNLTMGEVVTPFHSIKMNVTTEKKRIEPFEDD 238
>MGI|MGI:1915231 [details] [associations]
symbol:Hormad1 "HORMA domain containing 1" species:10090
"Mus musculus" [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005694 "chromosome" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0007130 "synaptonemal complex assembly" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0051177 "meiotic sister chromatid
cohesion" evidence=IMP] [GO:0051598 "meiotic recombination
checkpoint" evidence=IMP] [GO:0060629 "regulation of homologous
chromosome segregation" evidence=IMP] InterPro:IPR003511
MGI:MGI:1915231 Pfam:PF02301 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0030154 GO:GO:0048477 GO:GO:0007283
GO:GO:0045111 GO:GO:0007130 GO:GO:0001824 GO:GO:0051598
GO:GO:0042138 PROSITE:PS50815 eggNOG:NOG279197
GeneTree:ENSGT00390000018130 Gene3D:3.30.900.10 SUPFAM:SSF56019
CTD:84072 HOGENOM:HOG000293366 HOVERGEN:HBG074209 OMA:EIMRSKE
GO:GO:0051177 GO:GO:0060629 EMBL:AY626343 EMBL:AY634284
EMBL:AK014945 EMBL:AK016324 EMBL:AK016743 EMBL:AK163995
EMBL:BC051129 IPI:IPI00108437 IPI:IPI00620509 RefSeq:NP_080765.1
UniGene:Mm.179050 ProteinModelPortal:Q9D5T7 IntAct:Q9D5T7
STRING:Q9D5T7 PhosphoSite:Q9D5T7 PRIDE:Q9D5T7
Ensembl:ENSMUST00000029754 Ensembl:ENSMUST00000090797
Ensembl:ENSMUST00000107154 Ensembl:ENSMUST00000171191 GeneID:67981
KEGG:mmu:67981 UCSC:uc008qkb.1 UCSC:uc008qkd.1 InParanoid:Q9D5T7
NextBio:326130 Bgee:Q9D5T7 CleanEx:MM_HORMAD1 Genevestigator:Q9D5T7
Uniprot:Q9D5T7
Length = 392
Score = 212 (79.7 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 65/226 (28%), Positives = 107/226 (47%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKI-KKLMPMDAESRV--- 67
TE SL+ + LL +++ I+Y+RG+FPE + + + L +KI K+ S++
Sbjct: 23 TEHQSLMFVKRLLAVSVSCITYLRGIFPERAYGTRYLDDLCVKILKEDKNCPGSSQLVKW 82
Query: 68 ----YDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNKKKGG 123
YDALQKKYL+ ++ V P I I++ N K
Sbjct: 83 MLGCYDALQKKYLRMIILAVYTNPGDPQTISECYQFKFKYTKNGPIMDFISKNQNNK--- 139
Query: 124 TFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVDYEPP 183
++TT T + ++ ++R + LM+ L +P + + MKLFYYD+VTP DY+PP
Sbjct: 140 ----SSTTSADT---KKASILLIRKIYVLMQNLGPLPNDVCLTMKLFYYDEVTPPDYQPP 192
Query: 184 FFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKVKSVLDPCED 229
F+ E + +P + VG V + LKV + + E+
Sbjct: 193 GFKDGDCEGVI--FDGDPTYLNVGEVPTPFHTFRLKVTTEKERMEN 236
Score = 47 (21.6 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 278 ILADKQQPEEDNGMVDEDNTQDPEEDEQQ-LVRVKDW-INCRHLHSVELTDVLSNFPDIS 335
IL DK E++N + T+ E++E +K+ ++C+ +++ S P IS
Sbjct: 254 ILMDKDDVEDENHNNFDIKTKMNEQNENSGASEIKEPNLDCKEEETMQFKK--SQSPSIS 311
Query: 336 VLVKEGLLSK 345
E L+SK
Sbjct: 312 HCQVEQLVSK 321
>UNIPROTKB|E1C2C4 [details] [associations]
symbol:HORMAD2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0051177 "meiotic sister chromatid
cohesion" evidence=IEA] InterPro:IPR003511 Pfam:PF02301
GO:GO:0005634 GO:GO:0007126 GO:GO:0005694 PROSITE:PS50815
GeneTree:ENSGT00390000018130 Gene3D:3.30.900.10 SUPFAM:SSF56019
EMBL:AADN02050490 IPI:IPI00595277 Ensembl:ENSGALT00000013040
OMA:YLEDLCI Uniprot:E1C2C4
Length = 283
Score = 200 (75.5 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 61/220 (27%), Positives = 109/220 (49%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKIKK-----LMPMDAESR 66
T+Q S++L + LL I++ I+Y+RGLFPE+ + + + L +KI + L
Sbjct: 28 TKQQSVVLVKRLLAISVSCITYLRGLFPESSYGTRYLDDLCLKILREDKSCLGSFQIVKW 87
Query: 67 V---YDALQKKYLKTLLFCVCEAVEGP-MIXXXXXXXXXXXXXXQEISMNINRTGNKKKG 122
+ +DAL+K+YL + + E P + E+ + NRT
Sbjct: 88 IQGCFDALEKQYLHVAVLAMYTNPEEPETVTELYQFKFKYKKEVPEMDIISNRT------ 141
Query: 123 GTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDD--VTPVDY 180
N+ + + M+ ++ ++R L LM+ L +P + T+ MKL YY+D VTP DY
Sbjct: 142 -----NSVNGVYSEDMKQASSLLIRKLYLLMQNLGPLPNDITLTMKLLYYNDGVVTPDDY 196
Query: 181 EPPFFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKV 220
+PP F+ + + +P+ ++VG+V++ L +KV
Sbjct: 197 QPPGFKK-DDNPGDLLFDGDPVNLKVGSVSTGFHTLKVKV 235
>UNIPROTKB|Q86X24 [details] [associations]
symbol:HORMAD1 "HORMA domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0007126 "meiosis" evidence=ISS] [GO:0001824 "blastocyst
development" evidence=ISS] [GO:0005694 "chromosome" evidence=ISS]
[GO:0051598 "meiotic recombination checkpoint" evidence=ISS]
[GO:0051177 "meiotic sister chromatid cohesion" evidence=ISS]
[GO:0048477 "oogenesis" evidence=ISS] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=ISS] [GO:0007130
"synaptonemal complex assembly" evidence=ISS] [GO:0060629
"regulation of homologous chromosome segregation" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR003511
Pfam:PF02301 GO:GO:0005634 GO:GO:0005694 GO:GO:0030154
GO:GO:0048477 GO:GO:0007283 GO:GO:0045111 EMBL:CH471121
GO:GO:0007130 GO:GO:0001824 GO:GO:0051598 GO:GO:0042138
EMBL:AL356292 PROSITE:PS50815 eggNOG:NOG279197 Gene3D:3.30.900.10
SUPFAM:SSF56019 CTD:84072 HOVERGEN:HBG074209 OMA:EIMRSKE
GO:GO:0051177 GO:GO:0060629 EMBL:AY626344 EMBL:AL136755
EMBL:CR533505 EMBL:AK097390 EMBL:BC033014 EMBL:BC047406
IPI:IPI00329515 IPI:IPI00640365 IPI:IPI00643187 IPI:IPI00643705
IPI:IPI00646171 RefSeq:NP_001186758.1 RefSeq:NP_115508.2
UniGene:Hs.298312 ProteinModelPortal:Q86X24 STRING:Q86X24
PhosphoSite:Q86X24 DMDM:74750516 PRIDE:Q86X24 DNASU:84072
Ensembl:ENST00000322343 Ensembl:ENST00000361824
Ensembl:ENST00000368987 Ensembl:ENST00000368995
Ensembl:ENST00000442853 GeneID:84072 KEGG:hsa:84072 UCSC:uc001evk.2
UCSC:uc001evl.2 UCSC:uc001evm.2 GeneCards:GC01M150670
HGNC:HGNC:25245 HPA:HPA037850 MIM:609824 neXtProt:NX_Q86X24
PharmGKB:PA134930374 PhylomeDB:Q86X24 GenomeRNAi:84072
NextBio:73271 ArrayExpress:Q86X24 Bgee:Q86X24 CleanEx:HS_HORMAD1
Genevestigator:Q86X24 Uniprot:Q86X24
Length = 394
Score = 207 (77.9 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 63/226 (27%), Positives = 109/226 (48%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKI---KKLMPMDAES--- 65
TE SL+L + LL +++ I+Y+RG+FPE + + + L +KI K P +
Sbjct: 22 TEHQSLVLVKRLLAVSVSCITYLRGIFPECAYGTRYLDDLCVKILREDKNCPGSTQLVKW 81
Query: 66 --RVYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNKKKGG 123
YDALQKKYL+ ++ V E P + I++
Sbjct: 82 MLGCYDALQKKYLRMVVLAVYTNPEDPQTISECYQFKFKYTNNGPLMDFISKN------- 134
Query: 124 TFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVDYEPP 183
+ N ++ ++T ++S ++R + LM+ L +P + + MKLFYYD+VTP DY+PP
Sbjct: 135 --QSNESSMLSTDTKKASIL-LIRKIYILMQNLGPLPNDVCLTMKLFYYDEVTPPDYQPP 191
Query: 184 FFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKVKSVLDPCED 229
F+ E + P+ + VG V++ + +KV + + E+
Sbjct: 192 GFKDGDCEGVI--FEGEPMYLNVGEVSTPFHIFKVKVTTERERMEN 235
>UNIPROTKB|E2IUK4 [details] [associations]
symbol:HORMAD1 "HORMA domain-containing protein 1"
species:9823 "Sus scrofa" [GO:0060629 "regulation of homologous
chromosome segregation" evidence=ISS] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=ISS] [GO:0048477
"oogenesis" evidence=ISS] [GO:0051177 "meiotic sister chromatid
cohesion" evidence=ISS] [GO:0051598 "meiotic recombination
checkpoint" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005694 "chromosome" evidence=ISS] [GO:0001824 "blastocyst
development" evidence=ISS] [GO:0007126 "meiosis" evidence=ISS]
[GO:0007130 "synaptonemal complex assembly" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0030154 "cell
differentiation" evidence=IEA] InterPro:IPR003511 Pfam:PF02301
GO:GO:0005634 GO:GO:0005694 GO:GO:0030154 GO:GO:0048477
GO:GO:0007283 GO:GO:0007130 GO:GO:0001824 GO:GO:0051598
GO:GO:0042138 PROSITE:PS50815 Gene3D:3.30.900.10 SUPFAM:SSF56019
CTD:84072 GO:GO:0051177 GO:GO:0060629 EMBL:HM627267
RefSeq:NP_001181910.1 UniGene:Ssc.27038 GeneID:100499502
KEGG:ssc:100499502 Uniprot:E2IUK4
Length = 394
Score = 206 (77.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 63/226 (27%), Positives = 109/226 (48%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKI---KKLMPMDAES--- 65
TEQ SL+L + LL +++ I+Y+RG+FPE + + + L +KI K P +
Sbjct: 22 TEQQSLVLVKRLLAVSVSCITYLRGIFPECAYGTRYLDDLCVKILREDKNCPGSTQLVKW 81
Query: 66 --RVYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNKKKGG 123
YDALQKKYL+ ++ V E P I I++ N+
Sbjct: 82 MLGCYDALQKKYLRMVVLAVYTNPEDPQTISECYQFKFKYTSNGPIMDFISK--NQ---- 135
Query: 124 TFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVDYEPP 183
++ + +++ + ++ ++R + LM+ L +P + + MKLFYYD+VTP DY+PP
Sbjct: 136 ----SSESSMSSADTKKASILLIRKIYILMQNLGPLPNDVCLTMKLFYYDEVTPPDYQPP 191
Query: 184 FFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKVKSVLDPCED 229
F+ E + P+ + VG V + +KV + + E+
Sbjct: 192 GFKDGDCEGVI--FEGEPMYLNVGEVPTPFHTFKVKVTTEKERMEN 235
>UNIPROTKB|F1SS82 [details] [associations]
symbol:HORMAD1 "HORMA domain-containing protein 1"
species:9823 "Sus scrofa" [GO:0060629 "regulation of homologous
chromosome segregation" evidence=IEA] [GO:0051598 "meiotic
recombination checkpoint" evidence=IEA] [GO:0051177 "meiotic sister
chromatid cohesion" evidence=IEA] [GO:0048477 "oogenesis"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] InterPro:IPR003511 Pfam:PF02301 GO:GO:0005634
GO:GO:0005694 GO:GO:0048477 GO:GO:0007283 GO:GO:0045111
GO:GO:0007130 GO:GO:0001824 GO:GO:0051598 GO:GO:0042138
PROSITE:PS50815 GeneTree:ENSGT00390000018130 Gene3D:3.30.900.10
SUPFAM:SSF56019 OMA:EIMRSKE GO:GO:0051177 GO:GO:0060629
EMBL:CU655899 EMBL:CU463875 Ensembl:ENSSSCT00000007285
Uniprot:F1SS82
Length = 394
Score = 206 (77.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 63/226 (27%), Positives = 109/226 (48%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKI---KKLMPMDAES--- 65
TEQ SL+L + LL +++ I+Y+RG+FPE + + + L +KI K P +
Sbjct: 22 TEQQSLVLVKRLLAVSVSCITYLRGIFPECAYGTRYLDDLCVKILREDKNCPGSTQLVKW 81
Query: 66 --RVYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNKKKGG 123
YDALQKKYL+ ++ V E P I I++ N+
Sbjct: 82 MLGCYDALQKKYLRMVVLAVYTNPEDPQTISECYQFKFKYTSNGPIMDFISK--NQ---- 135
Query: 124 TFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVDYEPP 183
++ + +++ + ++ ++R + LM+ L +P + + MKLFYYD+VTP DY+PP
Sbjct: 136 ----SSESSMSSADTKKASILLIRKIYILMQNLGPLPNDVCLTMKLFYYDEVTPPDYQPP 191
Query: 184 FFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKVKSVLDPCED 229
F+ E + P+ + VG V + +KV + + E+
Sbjct: 192 GFKDGDCEGVI--FEGEPMYLNVGEVPTPFHTFKVKVTTEKERMEN 235
>UNIPROTKB|Q4R8B9 [details] [associations]
symbol:HORMAD1 "HORMA domain-containing protein 1"
species:9541 "Macaca fascicularis" [GO:0001824 "blastocyst
development" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005694 "chromosome" evidence=ISS] [GO:0007126 "meiosis"
evidence=ISS] [GO:0007130 "synaptonemal complex assembly"
evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=ISS] [GO:0048477 "oogenesis" evidence=ISS] [GO:0051177
"meiotic sister chromatid cohesion" evidence=ISS] [GO:0051598
"meiotic recombination checkpoint" evidence=ISS] [GO:0060629
"regulation of homologous chromosome segregation" evidence=ISS]
InterPro:IPR003511 Pfam:PF02301 GO:GO:0005634 GO:GO:0005694
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0007130
GO:GO:0001824 GO:GO:0051598 GO:GO:0042138 PROSITE:PS50815
Gene3D:3.30.900.10 SUPFAM:SSF56019 HOVERGEN:HBG074209 GO:GO:0051177
GO:GO:0060629 EMBL:AB168538 EMBL:AB070034 EMBL:AB070188
Uniprot:Q4R8B9
Length = 394
Score = 209 (78.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 64/228 (28%), Positives = 108/228 (47%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKI---KKLMPMDAES--- 65
TE SL+L + LL +++ I+Y+RG+FPE + + + L +KI K P +
Sbjct: 22 TEHQSLVLVKRLLAVSVSCITYLRGIFPECAYGTRYLDDLCVKILREDKNCPGSTQLVKW 81
Query: 66 --RVYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNKKKGG 123
YDALQKKYL+ ++ V E P + T N
Sbjct: 82 MLGCYDALQKKYLRMVVLAVYTNPEDPQ------------TISECYQFKFKYTNNGPLMD 129
Query: 124 TFKCNTTTE--ITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVDYE 181
N + E +++T + ++ ++R + LM+ L +P + + MKLFYYD+VTP DY+
Sbjct: 130 FISKNQSNESSMSSTDTKKASILLIRKIYILMQNLGPLPNDVCLTMKLFYYDEVTPPDYQ 189
Query: 182 PPFFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKVKSVLDPCED 229
PP F+ E + P+ + VG V++ + +KV + + E+
Sbjct: 190 PPGFKDGDCEGVI--FEGEPMYLNVGEVSTPFHIFKVKVTTERERMEN 235
Score = 37 (18.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 278 ILADKQQPEEDNGMVDEDNTQDPEEDEQQ 306
IL DK +E +D + + +EQ+
Sbjct: 253 ILRDKDVEDEQEHYTSDDLDMETKMEEQE 281
>ZFIN|ZDB-GENE-060312-39 [details] [associations]
symbol:zte38 "zebrafish testis-expressed 38"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003511 Pfam:PF02301 ZFIN:ZDB-GENE-060312-39
EMBL:AL954171 PROSITE:PS50815 eggNOG:NOG279197
GeneTree:ENSGT00390000018130 Gene3D:3.30.900.10 SUPFAM:SSF56019
HOGENOM:HOG000293366 HOVERGEN:HBG074209 OrthoDB:EOG4RXZ0B
OMA:YLEDLCI EMBL:BC114280 IPI:IPI00495287 RefSeq:NP_001034898.1
UniGene:Dr.89574 Ensembl:ENSDART00000053867 GeneID:556133
KEGG:dre:556133 CTD:556133 InParanoid:Q29RB8 NextBio:20881334
Uniprot:Q29RB8
Length = 305
Score = 199 (75.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 65/250 (26%), Positives = 118/250 (47%)
Query: 4 QKLKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKIKK--LMPM 61
Q L EA TE SL+ + ++ IA+ +I+Y+RG+FPE+ + + + L +K+ K
Sbjct: 13 QVLAEALDTEAQSLVFVKRMVVIAVSSITYLRGIFPEDSYRSRYLEDLCIKVLKQDCSSP 72
Query: 62 DAESRV------YDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINR 115
A + +DAL+K+YL+ L+ V + P E ++
Sbjct: 73 GAHKLIKWLMGCFDALEKRYLQMLVIGVHTS---PHDSNHVIESYQFKFRYSEHGPQMDI 129
Query: 116 TGNKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDV 175
N N +T + ++ ++R L LM+ L+ +P + MKL+Y DDV
Sbjct: 130 LSN--------VNGDIRVTLEDTKKASTLLIRKLFLLMQNLEALPTAVHLTMKLYYNDDV 181
Query: 176 TPVDYEPPFFRCCSEEEAHNPWTKNP-LKMEVGNVNSKHFVLALKV---KSVLDPCEDEN 231
TP +YEPP F+ + E W + + VG++ S++ + L+V +S L +D
Sbjct: 182 TPPEYEPPGFKAGANESL---WFEGTAVHFRVGDLQSRYHTMKLRVTAAQSRLGKLQD-G 237
Query: 232 DDMQDDEVSL 241
+ ++E+ +
Sbjct: 238 GQLSENEMEM 247
>UNIPROTKB|E2RSQ2 [details] [associations]
symbol:HORMAD1 "HORMA domain-containing protein 1"
species:9615 "Canis lupus familiaris" [GO:0042138 "meiotic DNA
double-strand break formation" evidence=ISS] [GO:0048477
"oogenesis" evidence=ISS] [GO:0051177 "meiotic sister chromatid
cohesion" evidence=ISS] [GO:0051598 "meiotic recombination
checkpoint" evidence=ISS] [GO:0060629 "regulation of homologous
chromosome segregation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005694 "chromosome" evidence=ISS] [GO:0001824
"blastocyst development" evidence=ISS] [GO:0007126 "meiosis"
evidence=ISS] [GO:0007130 "synaptonemal complex assembly"
evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR003511
Pfam:PF02301 GO:GO:0005634 GO:GO:0005694 GO:GO:0030154
GO:GO:0048477 GO:GO:0007283 GO:GO:0045111 GO:GO:0007130
GO:GO:0001824 GO:GO:0051598 GO:GO:0042138 PROSITE:PS50815
Gene3D:3.30.900.10 SUPFAM:SSF56019 GO:GO:0051177 GO:GO:0060629
Uniprot:E2RSQ2
Length = 395
Score = 205 (77.2 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 62/226 (27%), Positives = 109/226 (48%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKI---KKLMPMDAES--- 65
TEQ SL+L + LL +++ I+Y+RG+FPE + + + L +KI K P +
Sbjct: 22 TEQQSLVLVKRLLAVSVSCITYLRGIFPECAYGTRYLDDLCVKILREDKNCPGSTQLVKW 81
Query: 66 --RVYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNKKKGG 123
YDALQKKYL+ ++ V E P + I++ N+
Sbjct: 82 MLGCYDALQKKYLRMVVLAVYTNPEDPQTISECYQFKFKYASNGPVMDFISK--NQ---- 135
Query: 124 TFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVDYEPP 183
++ + +++ + ++ ++R + LM+ L +P + + MKLFYYD+VTP DY+PP
Sbjct: 136 ----SSESSMSSADTKKASILLIRKIYILMQNLGPLPNDVCLTMKLFYYDEVTPPDYQPP 191
Query: 184 FFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKVKSVLDPCED 229
F+ E + P+ + VG V + +KV + + E+
Sbjct: 192 GFKDGDCEGVI--FEGEPMYLNVGEVPTPFHTFKVKVTTEKERMEN 235
Score = 39 (18.8 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 9/42 (21%), Positives = 23/42 (54%)
Query: 435 GSRRLGKRVIHSTLTKKKLMEAKKALDIDFMEIETNEPLNKS 476
GS LG+ + + ++M +K++LD+ + + ++K+
Sbjct: 286 GSSELGEPSL--VCEEDEIMRSKESLDLSISHSQVEQLVSKT 325
>UNIPROTKB|Q2KIY6 [details] [associations]
symbol:HORMAD1 "HORMA domain-containing protein 1"
species:9913 "Bos taurus" [GO:0042138 "meiotic DNA double-strand
break formation" evidence=ISS] [GO:0048477 "oogenesis"
evidence=ISS] [GO:0051177 "meiotic sister chromatid cohesion"
evidence=ISS] [GO:0051598 "meiotic recombination checkpoint"
evidence=ISS] [GO:0001824 "blastocyst development" evidence=ISS]
[GO:0007126 "meiosis" evidence=ISS] [GO:0060629 "regulation of
homologous chromosome segregation" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005694 "chromosome" evidence=ISS]
[GO:0007130 "synaptonemal complex assembly" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003511
Pfam:PF02301 GO:GO:0005634 GO:GO:0005694 GO:GO:0030154
GO:GO:0048477 GO:GO:0007283 GO:GO:0045111 GO:GO:0007130
GO:GO:0001824 GO:GO:0051598 GO:GO:0042138 PROSITE:PS50815
eggNOG:NOG279197 GeneTree:ENSGT00390000018130 Gene3D:3.30.900.10
SUPFAM:SSF56019 EMBL:AAFC03030055 EMBL:BC112460 IPI:IPI00697553
RefSeq:NP_001039770.2 UniGene:Bt.108680 Ensembl:ENSBTAT00000003529
GeneID:529615 KEGG:bta:529615 CTD:84072 HOGENOM:HOG000293366
HOVERGEN:HBG074209 OMA:EIMRSKE NextBio:20875065 GO:GO:0051177
GO:GO:0060629 Uniprot:Q2KIY6
Length = 393
Score = 196 (74.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 61/226 (26%), Positives = 106/226 (46%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKI---KKLMPMDAES--- 65
TEQ SL+L + LL +++ I+Y+RG+FPE + + + L +KI K P +
Sbjct: 22 TEQQSLVLVKRLLAVSVSCITYLRGIFPECAYGTRYLDDLCVKILREDKNCPGSTQLVKW 81
Query: 66 --RVYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNKKKGG 123
YDAL KKYL+ ++ V E P + M+ +K +
Sbjct: 82 MLGCYDALHKKYLRMVVLAVYTNPEDPQTISECYQFKFKYTSNGPV-MDFT---SKNQ-- 135
Query: 124 TFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVDYEPP 183
+ +++ + ++ ++R + LM+ L +P + + MKLFYYD+VTP DY+PP
Sbjct: 136 ----SNEPNMSSADTKKASILLIRKIYILMQNLGPLPNDVCLTMKLFYYDEVTPPDYQPP 191
Query: 184 FFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKVKSVLDPCED 229
F+ E + P+ + VG V + +KV + + E+
Sbjct: 192 GFKDGDCEGVI--FEGEPMYLNVGEVPTPFHTFKVKVTTERERMEN 235
>UNIPROTKB|E2QXH7 [details] [associations]
symbol:HORMAD2 "HORMA domain-containing protein 2"
species:9615 "Canis lupus familiaris" [GO:0051177 "meiotic sister
chromatid cohesion" evidence=ISS] [GO:0007126 "meiosis"
evidence=ISS] [GO:0005694 "chromosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] InterPro:IPR003511 Pfam:PF02301
GO:GO:0005634 GO:GO:0005694 PROSITE:PS50815
GeneTree:ENSGT00390000018130 Gene3D:3.30.900.10 SUPFAM:SSF56019
GO:GO:0051177 Ensembl:ENSCAFT00000035264 Uniprot:E2QXH7
Length = 306
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 62/243 (25%), Positives = 118/243 (48%)
Query: 9 AEIT-EQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKI---KKLMPMDAE 64
++IT E +SL++ + L +I I+Y+RGLFPE+ + ++ + L +KI K P
Sbjct: 23 SQITNEHESLIMVKKLFATSISCITYLRGLFPESSYGERHLDDLSLKILREDKKCPGSLH 82
Query: 65 -----SRVYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNK 119
+DAL+KKYL + + + P + +M+ + +
Sbjct: 83 IIKWIQGCFDALEKKYLHMAVLTLYTNPKEPE-KVTEIYQFKFKYTKEGATMDFD---SY 138
Query: 120 KKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVD 179
+F+ T +E ++ ++ ++R L LM+ L +P + + MKL YY+ VTP D
Sbjct: 139 SSSASFESGTNSE----DIKKASILLIRKLYILMQNLGPLPNDVILTMKLHYYNAVTPHD 194
Query: 180 YEPPFFRCCSEEEAHNP-WTKNPLKMEVGNVNSKHFVLALKVKSVLDPCED-ENDDMQDD 237
Y+PP F+ +H + P+ ++VG V++ + +KV + + D EN+ Q++
Sbjct: 195 YQPPGFK--EGVNSHLLLFEGEPVNLQVGLVSTGFHSMKVKVTTEVTRVSDLENNLFQEN 252
Query: 238 EVS 240
+
Sbjct: 253 STT 255
>MGI|MGI:1923078 [details] [associations]
symbol:Hormad2 "HORMA domain containing 2" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
evidence=IDA] [GO:0007126 "meiosis" evidence=IEA] [GO:0051177
"meiotic sister chromatid cohesion" evidence=IMP]
InterPro:IPR003511 MGI:MGI:1923078 Pfam:PF02301 GO:GO:0005634
GO:GO:0005694 PROSITE:PS50815 eggNOG:NOG279197
GeneTree:ENSGT00390000018130 Gene3D:3.30.900.10 SUPFAM:SSF56019
HOGENOM:HOG000293366 HOVERGEN:HBG074209 GO:GO:0051177 CTD:150280
OrthoDB:EOG4MPHQN OMA:LHIIRWI EMBL:AK015939 EMBL:AL731658
EMBL:AL645910 EMBL:BC120781 EMBL:BC120783 EMBL:BC144842
IPI:IPI00137593 IPI:IPI00622214 RefSeq:NP_083734.1
UniGene:Mm.159592 ProteinModelPortal:Q5SQP1 PhosphoSite:Q5SQP1
PaxDb:Q5SQP1 PRIDE:Q5SQP1 Ensembl:ENSMUST00000109948
Ensembl:ENSMUST00000109949 GeneID:75828 KEGG:mmu:75828
UCSC:uc007huv.1 UCSC:uc011xqw.1 InParanoid:Q5SQP1 NextBio:344060
Bgee:Q5SQP1 CleanEx:MM_HORMAD2 Genevestigator:Q5SQP1 Uniprot:Q5SQP1
Length = 306
Score = 189 (71.6 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 63/240 (26%), Positives = 113/240 (47%)
Query: 9 AEIT-EQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKI---KKLMPMDAE 64
+++T E +SL++ + L I I+Y+RGLFPE+ + D+ + L +KI K P
Sbjct: 23 SQVTNEHESLVVVKKLFATCISCITYLRGLFPESSYRDRRLDDLSLKILREDKKCPGSLH 82
Query: 65 -----SRVYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNK 119
+DAL+K+YL + + + P + +M+ + +
Sbjct: 83 IIKWIQGCFDALEKRYLHMAVLTLYTNPKEPE-KVTEIYQFRFKYTKKGTTMDFDSSST- 140
Query: 120 KKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVD 179
+F+ T +E ++ + ++R L LM+ L +P + + MKL YY+ VTP D
Sbjct: 141 ----SFESGTDSE----DIKKACSLLIRQLYILMQNLGPLPNDVILTMKLHYYNSVTPHD 192
Query: 180 YEPPFFRCCSEEEAHNP-WTKNPLKMEVGNVNSKHFVLALKVKSVLDPCED-ENDDMQDD 237
Y+PP F+ +H + P+ + +G+V+S + +KV + D EN QDD
Sbjct: 193 YQPPGFK--EAVNSHFLLFEGEPVSLRMGSVSSGFHSMKVKVTTEATRMLDGENSVSQDD 250
>UNIPROTKB|F1RFE9 [details] [associations]
symbol:HORMAD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051177 "meiotic sister chromatid cohesion"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR003511 Pfam:PF02301
GO:GO:0005634 GO:GO:0007126 GO:GO:0005694 PROSITE:PS50815
GeneTree:ENSGT00390000018130 Gene3D:3.30.900.10 SUPFAM:SSF56019
OMA:LHIIRWI EMBL:CT943654 Ensembl:ENSSSCT00000010952 Uniprot:F1RFE9
Length = 276
Score = 183 (69.5 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 59/242 (24%), Positives = 115/242 (47%)
Query: 9 AEIT-EQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKI---KKLMPMDAE 64
++IT E +SL++ + L +I I+Y+RGLFPE+ + ++ + L +KI K P
Sbjct: 23 SQITNEHESLIMVKKLFATSISCITYLRGLFPESSYGERHLDDLSLKILREDKKCPGSLH 82
Query: 65 -----SRVYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNK 119
+DAL+K+YL + + + P + +M+ + +
Sbjct: 83 IIKWIQGCFDALEKRYLHMAVLTLYTNPKEPE-KVTEIYQFKFKYTKEGATMDFDSYSSS 141
Query: 120 KKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVD 179
+F+ T +E ++ ++ ++R L LM+ L +P + + MKL YY+ VTP D
Sbjct: 142 T---SFESGTNSE----DIKKASVLLIRKLYILMQNLGPLPNDVILTMKLHYYNAVTPHD 194
Query: 180 YEPPFFRCCSEEEAHNP-WTKNPLKMEVGNVNSKHFVLALKVKSVLDPCEDENDDMQDDE 238
Y+PP F+ +H + P+ ++VG V++ + +KV + D ++ Q+
Sbjct: 195 YQPPGFK--EGVNSHVLLFEGEPVNLQVGLVSTGFHSMKVKVTTEATRVSDLENNFQESS 252
Query: 239 VS 240
+
Sbjct: 253 AT 254
>UNIPROTKB|A6QQY4 [details] [associations]
symbol:HORMAD2 "HORMA domain-containing protein 2"
species:9913 "Bos taurus" [GO:0051177 "meiotic sister chromatid
cohesion" evidence=ISS] [GO:0007126 "meiosis" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005694 "chromosome"
evidence=ISS] InterPro:IPR003511 Pfam:PF02301 GO:GO:0005634
GO:GO:0005694 PROSITE:PS50815 eggNOG:NOG279197 Gene3D:3.30.900.10
SUPFAM:SSF56019 HOGENOM:HOG000293366 HOVERGEN:HBG074209
GO:GO:0051177 EMBL:BC120469 EMBL:BC150041 IPI:IPI00703315
IPI:IPI01020651 RefSeq:NP_001071611.1 UniGene:Bt.54223
ProteinModelPortal:A6QQY4 GeneID:777596 KEGG:bta:777596 CTD:150280
InParanoid:Q0VBW9 OrthoDB:EOG4MPHQN NextBio:20924215 Uniprot:A6QQY4
Length = 306
Score = 181 (68.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 57/222 (25%), Positives = 108/222 (48%)
Query: 9 AEIT-EQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKI---KKLMPMDAE 64
++IT E +SL++ + L +I I+Y+RGLFPE+ + ++ + L +KI K P
Sbjct: 23 SQITNEHESLIMVKKLFATSISCITYLRGLFPESSYGERHLDDLSLKILREDKKCPGSLH 82
Query: 65 -----SRVYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNK 119
+DAL+K+YL+ + + + P + +M+ + +
Sbjct: 83 IIKWIQGCFDALEKRYLRMAVLTLYTNPKEPE-KVTEIYQFKFKYTKEGATMDFDSSNT- 140
Query: 120 KKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVD 179
+FK T +E ++ ++ ++R L LM+ L +P + + M L YY+ VTP D
Sbjct: 141 ----SFKSGTNSE----DIKKASVLLIRKLYMLMQNLGPLPNDVILTMTLHYYNAVTPND 192
Query: 180 YEPPFFRCCSEEEAHNP-WTKNPLKMEVGNVNSKHFVLALKV 220
Y+PP F+ +H + P+ ++VG V++ + +KV
Sbjct: 193 YQPPGFK--EGVSSHLLLFEGEPVNLQVGMVSTGFHSMKVKV 232
>UNIPROTKB|F1MS88 [details] [associations]
symbol:HORMAD2 "HORMA domain-containing protein 2"
species:9913 "Bos taurus" [GO:0051177 "meiotic sister chromatid
cohesion" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003511 Pfam:PF02301
GO:GO:0005634 GO:GO:0007126 GO:GO:0005694 PROSITE:PS50815
GeneTree:ENSGT00390000018130 Gene3D:3.30.900.10 SUPFAM:SSF56019
IPI:IPI00703315 OMA:LHIIRWI EMBL:DAAA02045614
Ensembl:ENSBTAT00000029451 Uniprot:F1MS88
Length = 306
Score = 177 (67.4 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 56/222 (25%), Positives = 108/222 (48%)
Query: 9 AEIT-EQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKI---KKLMPMDAE 64
++IT E +SL++ + L +I I+Y+RGLFPE+ + ++ + L +KI K P
Sbjct: 23 SQITNEHESLIMVKKLFATSISCITYLRGLFPESSYGERHLDDLSLKILREDKKCPGSLH 82
Query: 65 -----SRVYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNK 119
+DAL+K+YL+ + + + P + +M+ + +
Sbjct: 83 IIKWIQGCFDALEKRYLRMAVLTLYTNPKEPE-KVTEIYQFKFKYTKEGATMDFDSSNT- 140
Query: 120 KKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVD 179
+F+ T +E ++ ++ ++R L LM+ L +P + + M L YY+ VTP D
Sbjct: 141 ----SFESGTNSE----DIKKASVLLIRKLYMLMQNLGPLPNDVILTMTLHYYNAVTPND 192
Query: 180 YEPPFFRCCSEEEAHNP-WTKNPLKMEVGNVNSKHFVLALKV 220
Y+PP F+ +H + P+ ++VG V++ + +KV
Sbjct: 193 YQPPGFK--EGVSSHLLLFEGEPVNLQVGMVSTGFHSMKVKV 232
>UNIPROTKB|Q8N7B1 [details] [associations]
symbol:HORMAD2 "HORMA domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005694 "chromosome" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0007126 "meiosis"
evidence=ISS] [GO:0051177 "meiotic sister chromatid cohesion"
evidence=ISS] InterPro:IPR003511 Pfam:PF02301 GO:GO:0005634
GO:GO:0005694 EMBL:CH471095 PROSITE:PS50815 eggNOG:NOG279197
Gene3D:3.30.900.10 SUPFAM:SSF56019 HOGENOM:HOG000293366
HOVERGEN:HBG074209 GO:GO:0051177 CTD:150280 OrthoDB:EOG4MPHQN
EMBL:CR456341 EMBL:AK098703 EMBL:AC002378 EMBL:AC003071
EMBL:BC030013 IPI:IPI00297680 RefSeq:NP_689723.1 UniGene:Hs.120391
ProteinModelPortal:Q8N7B1 STRING:Q8N7B1 PhosphoSite:Q8N7B1
DMDM:145558934 PRIDE:Q8N7B1 DNASU:150280 Ensembl:ENST00000336726
Ensembl:ENST00000403975 GeneID:150280 KEGG:hsa:150280
UCSC:uc003agy.3 GeneCards:GC22P030479 HGNC:HGNC:28383 HPA:HPA003074
neXtProt:NX_Q8N7B1 PharmGKB:PA134889862 InParanoid:Q8N7B1
OMA:LHIIRWI GenomeRNAi:150280 NextBio:86389 ArrayExpress:Q8N7B1
Bgee:Q8N7B1 CleanEx:HS_HORMAD2 Genevestigator:Q8N7B1 Uniprot:Q8N7B1
Length = 307
Score = 173 (66.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 61/243 (25%), Positives = 113/243 (46%)
Query: 9 AEIT-EQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKI---KKLMPMDAE 64
++IT E +SL + + L +I I+Y+RGLFPE+ + ++ + L +KI K P
Sbjct: 23 SQITNEHESLKMVKKLFATSISCITYLRGLFPESSYGERHLDDLSLKILREDKKCPGSLH 82
Query: 65 -----SRVYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNK 119
+DAL+K+YL+ V PM + ++ +
Sbjct: 83 IIRWIQGCFDALEKRYLR---MAVLTLYTDPMGSEKVTEMYQFKFKYTKEGATMDFDSHS 139
Query: 120 KKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVD 179
+F+ T E ++ ++ ++R L LM+ L+ +P + MKL YY+ VTP D
Sbjct: 140 SST-SFESGTNNE----DIKKASVLLIRKLYILMQDLEPLPNNVVLTMKLHYYNAVTPHD 194
Query: 180 YEPPFFRCCSEEEAHNP-WTKNPLKMEVGNVNSKHFVLALKVKSVLDPCED-ENDDMQDD 237
Y+P F+ +H + K P+ ++VG V++ + +KV + D EN+ +++
Sbjct: 195 YQPLGFK--EGVNSHFLLFDKEPINVQVGFVSTGFHSMKVKVMTEATKVIDLENNLFREN 252
Query: 238 EVS 240
+
Sbjct: 253 STT 255
>CGD|CAL0004050 [details] [associations]
symbol:orf19.3306 species:5476 "Candida albicans" [GO:0000800
"lateral element" evidence=IEA] [GO:0007130 "synaptonemal complex
assembly" evidence=IEA] [GO:0051598 "meiotic recombination
checkpoint" evidence=IEA] [GO:0000400 "four-way junction DNA
binding" evidence=IEA] InterPro:IPR017956 SMART:SM00384
InterPro:IPR003511 CGD:CAL0004050 Pfam:PF02301 GO:GO:0003677
EMBL:AACQ01000045 EMBL:AACQ01000042 PROSITE:PS50815
eggNOG:NOG279197 KO:K12778 Gene3D:3.30.900.10 InterPro:IPR016573
PIRSF:PIRSF010751 SUPFAM:SSF56019 RefSeq:XP_718129.1
RefSeq:XP_718398.1 ProteinModelPortal:Q5A928 GeneID:3639924
GeneID:3640206 KEGG:cal:CaO19.10816 KEGG:cal:CaO19.3306
Uniprot:Q5A928
Length = 607
Score = 164 (62.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 62/244 (25%), Positives = 123/244 (50%)
Query: 8 EAEITEQDSLLLTRNLLRIAIFNISYIRGLFPENYFND-----KSVPALEMKI---KKLM 59
+AE+T + + + L+ ++++ ISY+R LFPEN+++D + P + KKL
Sbjct: 5 QAELTRESHKSI-QELIAVSLYCISYLRDLFPENHYSDYKYYDTTEPTSDSNFILTKKLQ 63
Query: 60 PMD-AESRVY---------DALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEI 109
D AE ++ DA++ +YLK + F + + E P + QE+
Sbjct: 64 GNDNAEINMFINYIEKGINDAIKLEYLKGVSFEIFLSKEHPQLICESYLFTINYSR-QEV 122
Query: 110 SMNINRTGNKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKL 169
S+N + T +F+ TT I + Q +V+ L+ L +T DR+P+E+ ++L
Sbjct: 123 SIN-DET-------SFRATKTTIIQSIQ------GIVKRLILLTQTFDRLPDEKYFAIRL 168
Query: 170 FYYDDVTPVDYEPPFFRCCSEEEAHNPWTKNP--LKMEVGNVNSKHFVLALKVKSVLDPC 227
+ ++ PV Y+PP+F+ + + + T N + +E+ +N+ + +K+ +++ C
Sbjct: 169 LF-NESCPVRYQPPYFQDATYAKPSSI-TVNQGYIGLEISQMNA--YNNCVKMNILVETC 224
Query: 228 EDEN 231
+ EN
Sbjct: 225 KLEN 228
Score = 43 (20.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 366 VKEEMDGVTLCDKSPQ-----LDDQIYMKALYYALSMNYVTIAKLQKKLDKE 412
+KEE T+ + S Q LDD + ++L Y + + I K +++ +E
Sbjct: 534 LKEESSPTTVVECSTQNISETLDDLSFEESLQYLSQSSELQIVKCKQQQQQE 585
>ASPGD|ASPL0000031244 [details] [associations]
symbol:AN5516 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0007067 "mitosis"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003511 Pfam:PF02301 EMBL:BN001305 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50815 SUPFAM:SSF56019 EnsemblFungi:CADANIAT00003569
HOGENOM:HOG000216647 OMA:LFYLREF Uniprot:C8VG99
Length = 747
Score = 111 (44.1 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 43/178 (24%), Positives = 75/178 (42%)
Query: 64 ESRVYDALQKKYLKTLLFCVCEAVEGPM-IXXXXXXXXXXXXXXQEISMNINRTGNKKKG 122
E ++DAL K L+ + + E P + ++S + + G
Sbjct: 154 EMGIFDALSKSVLEAIQLTIIADKEAPENVLESYTFSFRYSEKLGDLSKRLESLSIQPCG 213
Query: 123 GTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVDYEP 182
+ N + T R+ +VR L+ L L +P +R + + LFY DD P DYEP
Sbjct: 214 --YVANMKSAYTA---RAGLESIVRRLITLSSFLPTLPNKRALGVHLFYTDDCPP-DYEP 267
Query: 183 PFFRCCSEEEAHNPWTKNPLK--MEVGNVNSKHFV--LALKVKSV--LDPCEDENDDM 234
P F ++ P T++ +K G + S + LKV S+ + P +E++ +
Sbjct: 268 PGFSGAKDDIIKYPLTEHWIKESQACGRMESGWHTRSVGLKVTSLKWIGPEPEESESI 325
Score = 60 (26.2 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 287 EDNGMVDEDNTQDPEEDEQQLVR--VKDWINCRHLHSVELT-DVLSNFPDI-SVLVKEGL 342
ED G+ DE+N + E + +D + L S+ + +V S+ D+ S + L
Sbjct: 342 EDIGIEDEENKLPSSQSEVGTSQEATQDVVERERLQSMMPSQEVQSSNMDLTSTQPVKPL 401
Query: 343 LSKGGKDTYTINKQEKF 359
L+ G DT TI EKF
Sbjct: 402 LTTGNGDTETIGSIEKF 418
Score = 56 (24.8 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 13 EQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKIK 56
+Q SL + + +L ++I + Y+R P F+D+ + + + K
Sbjct: 59 QQQSLEMVKIMLHVSIGTLFYLREFLPLQCFDDRDLKTAQRQQK 102
>SGD|S000001334 [details] [associations]
symbol:HOP1 "Meiosis-specific protein required for chromosome
synapsis" species:4932 "Saccharomyces cerevisiae" [GO:0005694
"chromosome" evidence=IEA] [GO:0051598 "meiotic recombination
checkpoint" evidence=IGI] [GO:0000800 "lateral element"
evidence=IPI] [GO:0007130 "synaptonemal complex assembly"
evidence=IMP] [GO:0007129 "synapsis" evidence=IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000400 "four-way junction DNA binding"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] InterPro:IPR003511 SGD:S000001334 Pfam:PF02301
GO:GO:0046872 EMBL:BK006942 EMBL:Z37997 EMBL:Z38060 GO:GO:0007130
GO:GO:0000800 GO:GO:0051598 GO:GO:0000400 OrthoDB:EOG4XKZGS
PROSITE:PS50815 EMBL:J04877 PIR:A34691 RefSeq:NP_012193.3
RefSeq:NP_012198.3 ProteinModelPortal:P20050 SMR:P20050
DIP:DIP-2371N STRING:P20050 PeptideAtlas:P20050
EnsemblFungi:YIL072W GeneID:854738 GeneID:854744 KEGG:sce:YIL066C
KEGG:sce:YIL072W CYGD:YIL072w eggNOG:NOG279197
GeneTree:ENSGT00390000018130 HOGENOM:HOG000112928 KO:K10807
KO:K12778 OMA:RRFIIIT NextBio:977446 Genevestigator:P20050
GermOnline:YIL072W Gene3D:3.30.900.10 InterPro:IPR016573
PIRSF:PIRSF010751 SUPFAM:SSF56019 Uniprot:P20050
Length = 605
Score = 133 (51.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 55/234 (23%), Positives = 108/234 (46%)
Query: 3 AQKLKEAEITEQ-DSLLLTRNLLRIAIF-NISYIRGLFPENYFNDKSVPALEMKIKKLMP 60
+QKL + +T L R L IF + ++ +NY + +KIK L+
Sbjct: 22 SQKLLQTMLTMSFGCLAFLRGLFPDDIFVDQRFVPEKVEKNYNKQNTSQNNSIKIKTLIR 81
Query: 61 -MDAESRVY-DALQKKYLKTL-LFCVCEA-----VEGPMIXXXXXXXXXXXXXXQEISMN 112
A++ + D L+K K++ L C+ +E P +++N
Sbjct: 82 GKSAQADLLLDWLEKGVFKSIRLKCLKALSLGIFLEDPTDLLENYIFSFDYDEENNVNIN 141
Query: 113 INRTGNKKKGGTFKCNTTTE-ITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFY 171
+N +GNKK G+ + E I+ R +++R + + ++L+ +P+++ + M+L +
Sbjct: 142 VNLSGNKK--GSKNADPENETISLLDSRRMVQQLMRRFIIITQSLEPLPQKKFLTMRLMF 199
Query: 172 YDDVTPVDYEPPFFRCCSEEEAHN---PWTKNPLKMEVGNVNSKHFVLALKVKS 222
D+V DY+P F+ + ++ P + ++VG +N+KH +AL V S
Sbjct: 200 NDNVDE-DYQPELFKDATFDKRATLKVPTNLDNDAIDVGTLNTKHHKVALSVLS 252
>RGD|1565447 [details] [associations]
symbol:Hormad2 "HORMA domain containing 2" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005694
"chromosome" evidence=IEA;ISO] [GO:0051177 "meiotic sister
chromatid cohesion" evidence=IEA;ISO] InterPro:IPR003511
RGD:1565447 Pfam:PF02301 GO:GO:0005634 GO:GO:0007126 GO:GO:0005694
PROSITE:PS50815 eggNOG:NOG279197 GeneTree:ENSGT00390000018130
Gene3D:3.30.900.10 SUPFAM:SSF56019 HOVERGEN:HBG074209 CTD:150280
OrthoDB:EOG4MPHQN EMBL:BC079253 IPI:IPI00464647
RefSeq:NP_001017501.1 UniGene:Rn.138964 Ensembl:ENSRNOT00000057529
GeneID:498400 KEGG:rno:498400 UCSC:RGD:1565447 HOGENOM:HOG000207370
NextBio:699673 Genevestigator:Q6AXZ7 Uniprot:Q6AXZ7
Length = 196
Score = 121 (47.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 42/174 (24%), Positives = 79/174 (45%)
Query: 9 AEIT-EQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKI---KKLMPMDAE 64
++IT E++SL++ + L +I I+Y+RGLFPE+ + D+ + L +KI K P
Sbjct: 23 SQITNERESLVMVKKLFATSISCITYLRGLFPESSYRDRYLDDLSLKILREDKKCPGSLH 82
Query: 65 -----SRVYDALQKKYLKTLLFCVCEAVEGPMIXXXXXXXXXXXXXXQEISMNINRTGNK 119
+DAL+K+YL + + + P + SM+ + +
Sbjct: 83 IIKWIQGCFDALEKRYLHMAVLTLYTNPKEPE-KVTEIYQFKFKYTKKGTSMDFDSSSTS 141
Query: 120 KKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYD 173
+ G + ++ + ++R L LM+ L +P + + MKL YY+
Sbjct: 142 FESGAH---------SKDVKKACSLLIRQLYVLMQNLGPLPNDVILTMKLHYYN 186
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 604 568 0.00079 120 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 611 (65 KB)
Total size of DFA: 299 KB (2155 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 54.46u 0.08s 54.54t Elapsed: 00:00:03
Total cpu time: 54.46u 0.09s 54.55t Elapsed: 00:00:03
Start: Sat May 11 00:52:39 2013 End: Sat May 11 00:52:42 2013