BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042785
(604 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5M7C8|HORM1_XENLA HORMA domain-containing protein 1 OS=Xenopus laevis GN=hormad1 PE=2
SV=1
Length = 386
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 111/226 (49%), Gaps = 40/226 (17%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFN--------------DKSVPALEMKIKK 57
TE SL+L + LL +++ I+Y+RGLFPE + DKS P +K
Sbjct: 22 TETQSLILVKRLLAVSVSCITYLRGLFPEYAYGTRYLDDICVKILREDKSCPGSTQLVKW 81
Query: 58 LMPMDAESRVYDALQKKYLKTLLFCVCEAVEGP--MIEEYAFSFSYSDSDSQEISMNINR 115
++ YDALQKKYL+ ++ + E P + E Y F F Y+ S M+
Sbjct: 82 ML------GCYDALQKKYLRMVMLAIYTDPEDPQTVTECYQFKFKYTASGP---VMD--- 129
Query: 116 TGNKKKGGTFKCNTTTEITT-TQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDD 174
F N + ++T + + ++ ++R L LM+ L +P + + MKLFYYD+
Sbjct: 130 ---------FVSNNSNSVSTCSDAKKTSILLIRKLYILMQNLGPLPNDVCLTMKLFYYDE 180
Query: 175 VTPVDYEPPFFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKV 220
VTP DY+PP F+ + E + P+ + VG V + VL +KV
Sbjct: 181 VTPADYQPPGFKEGTCEGLM--FEGEPMYLNVGEVATPFHVLKVKV 224
>sp|D3ZWE7|HORM1_RAT HORMA domain-containing protein 1 OS=Rattus norvegicus GN=Hormad1
PE=3 SV=1
Length = 392
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 36/225 (16%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFN--------------DKSVPALEMKIKK 57
TEQ SL+ + LL +++ I+Y+RG+FPE + DK+ P +K
Sbjct: 23 TEQQSLMFVKRLLAVSVSCITYLRGIFPERAYGTRYLDDLCVKILKEDKNCPGSSQLVKW 82
Query: 58 LMPMDAESRVYDALQKKYLKTLLFCVCEAVEGP--MIEEYAFSFSYSDSDSQEISMNINR 115
++ YDALQKKYL+ ++ V E P + E Y F F Y+ + I I++
Sbjct: 83 ML------GCYDALQKKYLRMIILAVYTNPEDPQTISECYQFKFKYTKNGP--IMDFISK 134
Query: 116 TGNKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDV 175
N K + T+ + ++ ++R + LM+ L +P + + MKLFYYD+V
Sbjct: 135 NQNNK----------SSTTSADTKKASILLIRKIYVLMQNLGPLPNDVCLTMKLFYYDEV 184
Query: 176 TPVDYEPPFFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKV 220
TP DY+PP F+ E + +P + VG V + LKV
Sbjct: 185 TPPDYQPPGFKDGDCEGVI--FDGDPTYLNVGEVPTPFHTFRLKV 227
>sp|Q4R8B9|HORM1_MACFA HORMA domain-containing protein 1 OS=Macaca fascicularis GN=HORMAD1
PE=2 SV=1
Length = 394
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 36/225 (16%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFN--------------DKSVPALEMKIKK 57
TE SL+L + LL +++ I+Y+RG+FPE + DK+ P +K
Sbjct: 22 TEHQSLVLVKRLLAVSVSCITYLRGIFPECAYGTRYLDDLCVKILREDKNCPGSTQLVKW 81
Query: 58 LMPMDAESRVYDALQKKYLKTLLFCVCEAVEGP--MIEEYAFSFSYSDSDSQEISMNINR 115
++ YDALQKKYL+ ++ V E P + E Y F F Y+++ ++ N+
Sbjct: 82 ML------GCYDALQKKYLRMVVLAVYTNPEDPQTISECYQFKFKYTNNGPLMDFISKNQ 135
Query: 116 TGNKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDV 175
+ + +++T + ++ ++R + LM+ L +P + + MKLFYYD+V
Sbjct: 136 SNE------------SSMSSTDTKKASILLIRKIYILMQNLGPLPNDVCLTMKLFYYDEV 183
Query: 176 TPVDYEPPFFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKV 220
TP DY+PP F+ E + P+ + VG V++ + +KV
Sbjct: 184 TPPDYQPPGFKDGDCEGVI--FEGEPMYLNVGEVSTPFHIFKVKV 226
>sp|Q86X24|HORM1_HUMAN HORMA domain-containing protein 1 OS=Homo sapiens GN=HORMAD1 PE=2
SV=1
Length = 394
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 111/225 (49%), Gaps = 36/225 (16%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFN--------------DKSVPALEMKIKK 57
TE SL+L + LL +++ I+Y+RG+FPE + DK+ P +K
Sbjct: 22 TEHQSLVLVKRLLAVSVSCITYLRGIFPECAYGTRYLDDLCVKILREDKNCPGSTQLVKW 81
Query: 58 LMPMDAESRVYDALQKKYLKTLLFCVCEAVEGP--MIEEYAFSFSYSDSDSQEISMNINR 115
++ YDALQKKYL+ ++ V E P + E Y F F Y+++ ++ N+
Sbjct: 82 ML------GCYDALQKKYLRMVVLAVYTNPEDPQTISECYQFKFKYTNNGPLMDFISKNQ 135
Query: 116 TGNKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDV 175
+ + + +T + ++ ++R + LM+ L +P + + MKLFYYD+V
Sbjct: 136 SNE------------SSMLSTDTKKASILLIRKIYILMQNLGPLPNDVCLTMKLFYYDEV 183
Query: 176 TPVDYEPPFFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKV 220
TP DY+PP F+ E + P+ + VG V++ + +KV
Sbjct: 184 TPPDYQPPGFKDGDCEGVI--FEGEPMYLNVGEVSTPFHIFKVKV 226
>sp|Q9D5T7|HORM1_MOUSE HORMA domain-containing protein 1 OS=Mus musculus GN=Hormad1 PE=1
SV=1
Length = 392
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 36/225 (16%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFN--------------DKSVPALEMKIKK 57
TE SL+ + LL +++ I+Y+RG+FPE + DK+ P +K
Sbjct: 23 TEHQSLMFVKRLLAVSVSCITYLRGIFPERAYGTRYLDDLCVKILKEDKNCPGSSQLVKW 82
Query: 58 LMPMDAESRVYDALQKKYLKTLLFCVCEAVEGP--MIEEYAFSFSYSDSDSQEISMNINR 115
++ YDALQKKYL+ ++ V P + E Y F F Y+ + I I++
Sbjct: 83 ML------GCYDALQKKYLRMIILAVYTNPGDPQTISECYQFKFKYTKNGP--IMDFISK 134
Query: 116 TGNKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDV 175
N K + T+ + ++ ++R + LM+ L +P + + MKLFYYD+V
Sbjct: 135 NQNNK----------SSTTSADTKKASILLIRKIYVLMQNLGPLPNDVCLTMKLFYYDEV 184
Query: 176 TPVDYEPPFFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKV 220
TP DY+PP F+ E + +P + VG V + LKV
Sbjct: 185 TPPDYQPPGFKDGDCEGVI--FDGDPTYLNVGEVPTPFHTFRLKV 227
>sp|A2BF66|HORM1_DANRE HORMA domain-containing protein 1 OS=Danio rerio GN=hormad1 PE=2
SV=1
Length = 356
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 120/240 (50%), Gaps = 26/240 (10%)
Query: 3 AQKLKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKIKKLMPMD 62
Q L + EQ SL+L + LL IAI +I+Y+RGLF E + K V L++ I +
Sbjct: 13 CQMLPDVVSNEQQSLVLVKKLLAIAISSITYLRGLFSEKAYGRKYVGELKVYILREDSCP 72
Query: 63 AESRV-------YDALQKKYLKTLLFCVCEAVEGP--MIEEYAFSFSYSDSDSQEISMNI 113
++ +DALQ++YL+ +L + + P + E Y F Y++ Q M+
Sbjct: 73 GAQQIVHWLQGCFDALQRRYLRMVLLSIYCDPDNPQKVTECYQFKIKYTEKGPQ---MDF 129
Query: 114 NRTGNKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYD 173
+ N + C+ T + S+ +VR L LM+ L +P++ + MKL YYD
Sbjct: 130 E-SKNGQSLTKMACDNT--------QKSSMLLVRKLYMLMQNLGPLPDDVCLNMKLLYYD 180
Query: 174 DVTPVDYEPPFFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKV---KSVLDPCEDE 230
+VTP +Y+PP F+ ++ + + P+ + +G V + + + V K ++P ED+
Sbjct: 181 EVTPQEYQPPGFK--EDDNGTLMFEREPVNLTMGEVVTPFHSIKMNVTTEKKRIEPFEDD 238
>sp|Q2KIY6|HORM1_BOVIN HORMA domain-containing protein 1 OS=Bos taurus GN=HORMAD1 PE=2
SV=2
Length = 393
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 36/225 (16%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFN--------------DKSVPALEMKIKK 57
TEQ SL+L + LL +++ I+Y+RG+FPE + DK+ P +K
Sbjct: 22 TEQQSLVLVKRLLAVSVSCITYLRGIFPECAYGTRYLDDLCVKILREDKNCPGSTQLVKW 81
Query: 58 LMPMDAESRVYDALQKKYLKTLLFCVCEAVEGP--MIEEYAFSFSYSDSDSQEISMNINR 115
++ YDAL KKYL+ ++ V E P + E Y F F Y+ S+ +
Sbjct: 82 ML------GCYDALHKKYLRMVVLAVYTNPEDPQTISECYQFKFKYT-SNGPVMDFTSKN 134
Query: 116 TGNKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDV 175
N+ +++ + ++ ++R + LM+ L +P + + MKLFYYD+V
Sbjct: 135 QSNEPN-----------MSSADTKKASILLIRKIYILMQNLGPLPNDVCLTMKLFYYDEV 183
Query: 176 TPVDYEPPFFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKV 220
TP DY+PP F+ E + P+ + VG V + +KV
Sbjct: 184 TPPDYQPPGFKDGDCEGVI--FEGEPMYLNVGEVPTPFHTFKVKV 226
>sp|E2RSQ2|HORM1_CANFA HORMA domain-containing protein 1 OS=Canis familiaris GN=HORMAD1
PE=3 SV=1
Length = 395
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 40/227 (17%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFN--------------DKSVPALEMKIKK 57
TEQ SL+L + LL +++ I+Y+RG+FPE + DK+ P +K
Sbjct: 22 TEQQSLVLVKRLLAVSVSCITYLRGIFPECAYGTRYLDDLCVKILREDKNCPGSTQLVKW 81
Query: 58 LMPMDAESRVYDALQKKYLKTLLFCVCEAVEGP--MIEEYAFSFSYSDSDS--QEISMNI 113
++ YDALQKKYL+ ++ V E P + E Y F F Y+ + IS N
Sbjct: 82 ML------GCYDALQKKYLRMVVLAVYTNPEDPQTISECYQFKFKYASNGPVMDFISKNQ 135
Query: 114 NRTGNKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYD 173
+ + T + ++ ++R + LM+ L +P + + MKLFYYD
Sbjct: 136 SSESSMSSADT--------------KKASILLIRKIYILMQNLGPLPNDVCLTMKLFYYD 181
Query: 174 DVTPVDYEPPFFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKV 220
+VTP DY+PP F+ E + P+ + VG V + +KV
Sbjct: 182 EVTPPDYQPPGFKDGDCEGVI--FEGEPMYLNVGEVPTPFHTFKVKV 226
>sp|E2IUK4|HORM1_PIG HORMA domain-containing protein 1 OS=Sus scrofa GN=HORMAD1 PE=2
SV=1
Length = 394
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 40/227 (17%)
Query: 12 TEQDSLLLTRNLLRIAIFNISYIRGLFPENYFN--------------DKSVPALEMKIKK 57
TEQ SL+L + LL +++ I+Y+RG+FPE + DK+ P +K
Sbjct: 22 TEQQSLVLVKRLLAVSVSCITYLRGIFPECAYGTRYLDDLCVKILREDKNCPGSTQLVKW 81
Query: 58 LMPMDAESRVYDALQKKYLKTLLFCVCEAVEGP--MIEEYAFSFSYSDSDS--QEISMNI 113
++ YDALQKKYL+ ++ V E P + E Y F F Y+ + IS N
Sbjct: 82 ML------GCYDALQKKYLRMVVLAVYTNPEDPQTISECYQFKFKYTSNGPIMDFISKNQ 135
Query: 114 NRTGNKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYD 173
+ + T + ++ ++R + LM+ L +P + + MKLFYYD
Sbjct: 136 SSESSMSSADT--------------KKASILLIRKIYILMQNLGPLPNDVCLTMKLFYYD 181
Query: 174 DVTPVDYEPPFFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKV 220
+VTP DY+PP F+ E + P+ + VG V + +KV
Sbjct: 182 EVTPPDYQPPGFKDGDCEGVI--FEGEPMYLNVGEVPTPFHTFKVKV 226
>sp|Q5SQP1|HORM2_MOUSE HORMA domain-containing protein 2 OS=Mus musculus GN=Hormad2 PE=1
SV=1
Length = 306
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 118/243 (48%), Gaps = 38/243 (15%)
Query: 13 EQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKIKK--------LMPMDAE 64
E +SL++ + L I I+Y+RGLFPE+ + D+ + L +KI + L +
Sbjct: 28 EHESLVVVKKLFATCISCITYLRGLFPESSYRDRRLDDLSLKILREDKKCPGSLHIIKWI 87
Query: 65 SRVYDALQKKYLKTLLFCVCEAVEGP--MIEEYAFSFSYSDSDSQEISMNINRTGNKKKG 122
+DAL+K+YL + + + P + E Y F F Y+ + +M+ + + +
Sbjct: 88 QGCFDALEKRYLHMAVLTLYTNPKEPEKVTEIYQFRFKYTKKGT---TMDFDSSSTSFES 144
Query: 123 GTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVDYEP 182
GT + ++ + ++R L LM+ L +P + + MKL YY+ VTP DY+P
Sbjct: 145 GT---------DSEDIKKACSLLIRQLYILMQNLGPLPNDVILTMKLHYYNSVTPHDYQP 195
Query: 183 PFFRCCSEEEAHNP----WTKNPLKMEVGNVNSKHFVLALKVKS----VLDPCEDENDDM 234
P F+ EA N + P+ + +G+V+S + +KV + +LD EN
Sbjct: 196 PGFK-----EAVNSHFLLFEGEPVSLRMGSVSSGFHSMKVKVTTEATRMLD---GENSVS 247
Query: 235 QDD 237
QDD
Sbjct: 248 QDD 250
>sp|A6QQY4|HORM2_BOVIN HORMA domain-containing protein 2 OS=Bos taurus GN=HORMAD2 PE=2
SV=1
Length = 306
Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 114/223 (51%), Gaps = 24/223 (10%)
Query: 9 AEIT-EQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKIKK--------LM 59
++IT E +SL++ + L +I I+Y+RGLFPE+ + ++ + L +KI + L
Sbjct: 23 SQITNEHESLIMVKKLFATSISCITYLRGLFPESSYGERHLDDLSLKILREDKKCPGSLH 82
Query: 60 PMDAESRVYDALQKKYLKTLLFCVCEAVEGP--MIEEYAFSFSYSDSDSQEISMNINRTG 117
+ +DAL+K+YL+ + + + P + E Y F F Y+ + +M+ + +
Sbjct: 83 IIKWIQGCFDALEKRYLRMAVLTLYTNPKEPEKVTEIYQFKFKYTKEGA---TMDFDSSN 139
Query: 118 NKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTP 177
+FK T +E ++ ++ ++R L LM+ L +P + + M L YY+ VTP
Sbjct: 140 T-----SFKSGTNSE----DIKKASVLLIRKLYMLMQNLGPLPNDVILTMTLHYYNAVTP 190
Query: 178 VDYEPPFFRCCSEEEAHNPWTKNPLKMEVGNVNSKHFVLALKV 220
DY+PP F+ + P+ ++VG V++ + +KV
Sbjct: 191 NDYQPPGFKEGVSSHLL-LFEGEPVNLQVGMVSTGFHSMKVKV 232
>sp|E2QXH7|HORM2_CANFA HORMA domain-containing protein 2 OS=Canis familiaris GN=HORMAD2
PE=3 SV=1
Length = 306
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 30/243 (12%)
Query: 13 EQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKIKK--------LMPMDAE 64
E +SL++ + L +I I+Y+RGLFPE+ + ++ + L +KI + L +
Sbjct: 28 EHESLIMVKKLFATSISCITYLRGLFPESSYGERHLDDLSLKILREDKKCPGSLHIIKWI 87
Query: 65 SRVYDALQKKYLKTLLFCVCEAVEGP--MIEEYAFSFSYSDSDSQEISMNINRTGNKKKG 122
+DAL+KKYL + + + P + E Y F F Y+ + + + + +
Sbjct: 88 QGCFDALEKKYLHMAVLTLYTNPKEPEKVTEIYQFKFKYT-KEGATMDFDSYSSSASFES 146
Query: 123 GTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTPVDYEP 182
GT + ++ ++ ++R L LM+ L +P + + MKL YY+ VTP DY+P
Sbjct: 147 GT---------NSEDIKKASILLIRKLYILMQNLGPLPNDVILTMKLHYYNAVTPHDYQP 197
Query: 183 PFFRCCSEEEAHNP----WTKNPLKMEVGNVNSKHFVLALKVKSVLDPCED-ENDDMQDD 237
P F+ E N + P+ ++VG V++ + +KV + + D EN+ Q++
Sbjct: 198 PGFK-----EGVNSHLLLFEGEPVNLQVGLVSTGFHSMKVKVTTEVTRVSDLENNLFQEN 252
Query: 238 EVS 240
+
Sbjct: 253 STT 255
>sp|Q8N7B1|HORM2_HUMAN HORMA domain-containing protein 2 OS=Homo sapiens GN=HORMAD2 PE=1
SV=2
Length = 307
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 111/227 (48%), Gaps = 30/227 (13%)
Query: 9 AEIT-EQDSLLLTRNLLRIAIFNISYIRGLFPENYFNDKSVPALEMKIKK--------LM 59
++IT E +SL + + L +I I+Y+RGLFPE+ + ++ + L +KI + L
Sbjct: 23 SQITNEHESLKMVKKLFATSISCITYLRGLFPESSYGERHLDDLSLKILREDKKCPGSLH 82
Query: 60 PMDAESRVYDALQKKYLKTLLFCVCEAVEGP--MIEEYAFSFSYSDSDSQEISMNINRTG 117
+ +DAL+K+YL+ + + G + E Y F F Y+ + + + + +
Sbjct: 83 IIRWIQGCFDALEKRYLRMAVLTLYTDPMGSEKVTEMYQFKFKYT-KEGATMDFDSHSSS 141
Query: 118 NKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYYDDVTP 177
+ GT ++ ++ ++R L LM+ L+ +P + MKL YY+ VTP
Sbjct: 142 TSFESGT---------NNEDIKKASVLLIRKLYILMQDLEPLPNNVVLTMKLHYYNAVTP 192
Query: 178 VDYEPPFFRCCSEEEAHNP----WTKNPLKMEVGNVNSKHFVLALKV 220
DY+P F+ E N + K P+ ++VG V++ + +KV
Sbjct: 193 HDYQPLGFK-----EGVNSHFLLFDKEPINVQVGFVSTGFHSMKVKV 234
>sp|P20050|HOP1_YEAST Meiosis-specific protein HOP1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HOP1 PE=1 SV=2
Length = 605
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 116/233 (49%), Gaps = 34/233 (14%)
Query: 19 LTRNLLRIAIFNISYIRGLFPENYFND-KSVPAL--------------EMKIKKLMPMDA 63
L + +L ++ ++++RGLFP++ F D + VP +KIK L+ +
Sbjct: 25 LLQTMLTMSFGCLAFLRGLFPDDIFVDQRFVPEKVEKNYNKQNTSQNNSIKIKTLIRGKS 84
Query: 64 ----------ESRVYDALQKKYLKTLLFCVCEAVEGPMIEEYAFSFSYSDSDSQEISMNI 113
E V+ +++ K LK L + ++E Y FSF Y + ++ I++N+
Sbjct: 85 AQADLLLDWLEKGVFKSIRLKCLKALSLGIFLEDPTDLLENYIFSFDYDEENNVNINVNL 144
Query: 114 NRTGNKKKGGTFKCNTTTE-ITTTQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLFYY 172
+GNKK G+ + E I+ R +++R + + ++L+ +P+++ + M+L +
Sbjct: 145 --SGNKK--GSKNADPENETISLLDSRRMVQQLMRRFIIITQSLEPLPQKKFLTMRLMFN 200
Query: 173 DDVTPVDYEPPFFRCCSEEEAHN---PWTKNPLKMEVGNVNSKHFVLALKVKS 222
D+V DY+P F+ + ++ P + ++VG +N+KH +AL V S
Sbjct: 201 DNVDE-DYQPELFKDATFDKRATLKVPTNLDNDAIDVGTLNTKHHKVALSVLS 252
>sp|Q48BY8|HSLO_PSE14 33 kDa chaperonin OS=Pseudomonas syringae pv. phaseolicola (strain
1448A / Race 6) GN=hslO PE=3 SV=1
Length = 300
Score = 36.6 bits (83), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 117 GNKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMP-EERTILMKLFYYDDV 175
G++ +G + +IT + R ++ + V TL + + + + +TIL +L++ D V
Sbjct: 164 GHRARGLLLQQLPAAQITDPEERDASWEHVITLASTLTAEEMLGLDNQTILHRLYHEDPV 223
Query: 176 TPVDYEPPFFRC-CSEEEAHN 195
D +P FRC CS E + N
Sbjct: 224 RLFDAQPICFRCSCSRERSAN 244
>sp|Q88AZ5|HSLO_PSESM 33 kDa chaperonin OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=hslO PE=3 SV=1
Length = 300
Score = 36.6 bits (83), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 55 IKKLMPMDAESRVYDALQKKYLKTLLFCVCEAVEGPMIEEYAFSFSYSDSDSQEISMNIN 114
++ LMP + + D Q K + ++ A++G + E + S + S+ +
Sbjct: 108 LQDLMPDGSLALTVDPRQGKRYQGIV-----ALDGVDLSE-SLSNYFVMSEQLGTRFWLK 161
Query: 115 RTGNKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMP-EERTILMKLFYYD 173
G++ +G + +IT + R ++ + V TL + + + + +T+L +L++ D
Sbjct: 162 ADGHRARGLLLQQLPAAQITDPEERDASWEHVVTLASTLTAEEMLSLDNQTVLHRLYHED 221
Query: 174 DVTPVDYEPPFFRC-CSEEEAHN 195
V D +P FRC CS E + N
Sbjct: 222 PVRLFDVQPICFRCSCSRERSAN 244
>sp|Q500D0|HSLO_PSEU2 33 kDa chaperonin OS=Pseudomonas syringae pv. syringae (strain
B728a) GN=hslO PE=3 SV=1
Length = 300
Score = 35.8 bits (81), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 117 GNKKKGGTFKCNTTTEITTTQMRSSACKMVRTLVQLMRTLDRMP-EERTILMKLFYYDDV 175
G++ +G + +IT + R ++ + V TL + + + + +TIL +L++ D V
Sbjct: 164 GHRARGLLLQQLPIAQITDPEERDASWEHVITLANTLTAEEMLGLDNQTILHRLYHEDPV 223
Query: 176 TPVDYEPPFFRC-CSEEEAHN 195
D +P FRC CS E + N
Sbjct: 224 RLFDEQPICFRCSCSRERSAN 244
>sp|Q03VY3|HIS8_LEUMM Histidinol-phosphate aminotransferase OS=Leuconostoc mesenteroides
subsp. mesenteroides (strain ATCC 8293 / NCDO 523)
GN=hisC PE=3 SV=1
Length = 357
Score = 33.1 bits (74), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 7/141 (4%)
Query: 41 NYFNDKSVPALEMKIKKLMPMDAESRVYDALQKKYLKTLLFCVCEA-----VEGPMIEEY 95
Y+ D L + KL +D + V+ A + ++ L V E + P EY
Sbjct: 58 GYYPDGQATELREAVAKLNHVDPQHLVFGAGADELIELLTRVVLEPGSNIIIPNPTFGEY 117
Query: 96 AFSFSYSDSDSQEISMNINRTGNKKKGGTF-KCNTTTEITTTQMRSSACKMVRTLVQLMR 154
A S +++I +N++ GN + T + ++ + T + R
Sbjct: 118 AMHAQIEQSTTKKIPVNVDN-GNVDFDAILDAIDDKTAMVWIANPNNPTGVFETTSSIKR 176
Query: 155 TLDRMPEERTILMKLFYYDDV 175
LD++P T+++ YYD V
Sbjct: 177 FLDKLPANITLVVDEAYYDFV 197
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 215,515,030
Number of Sequences: 539616
Number of extensions: 9215987
Number of successful extensions: 31528
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 30335
Number of HSP's gapped (non-prelim): 897
length of query: 604
length of database: 191,569,459
effective HSP length: 123
effective length of query: 481
effective length of database: 125,196,691
effective search space: 60219608371
effective search space used: 60219608371
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)