BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042795
(122 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G V++ ++AL RD KYWTEPE+F+P+RF + + D + + Y PFG+G R C G+ FA
Sbjct: 370 GVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFAL 428
Query: 67 AIMKLSLVVLLYHFDW 82
MKL+L+ +L +F +
Sbjct: 429 MNMKLALIRVLQNFSF 444
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G V++ ++AL RD KYWTEPE+F+P+RF + + D + + Y PFG+G R C G+ FA
Sbjct: 371 GVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFAL 429
Query: 67 AIMKLSLVVLLYHFDW 82
MKL+L+ +L +F +
Sbjct: 430 MNMKLALIRVLQNFSF 445
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G V++ ++AL RD KYWTEPE+F+P+RF + + D + + Y PFG+G R C G+ FA
Sbjct: 369 GVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFAL 427
Query: 67 AIMKLSLVVLLYHFDW 82
MKL+L+ +L +F +
Sbjct: 428 MNMKLALIRVLQNFSF 443
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLE-CSIDYKGNNFEYIPFGAGRRICPGISFA 65
G VI+N WAL + K W +P++F+P+RFL + Y+PFGAG R C G A
Sbjct: 371 GTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILA 430
Query: 66 DAIMKLSLVVLLYHFDWTLPNEMKHEDLD-------MTETFSVGIRTK 106
+ L + LL FD +P++ + L+ + ++F V I+ +
Sbjct: 431 RQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLIDSFKVKIKVR 478
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G VI N +++ D KYW +PE F P+RFL+ S Y +PF GRR C G A
Sbjct: 371 GTTVITNLYSVHFDEKYWRDPEVFHPERFLDSS-GYFAKKEALVPFSLGRRHCLGEHLAR 429
Query: 67 AIMKLSLVVLLYHFDWTLPNEM 88
M L LL F P+E+
Sbjct: 430 MEMFLFFTALLQRFHLHFPHEL 451
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G VI N +++ D KYW +PE F P+RFL+ S Y +PF GRR C G A
Sbjct: 371 GTTVITNLYSVHFDEKYWRDPEVFHPERFLDSS-GYFAKKEALVPFSLGRRHCLGEHLAR 429
Query: 67 AIMKLSLVVLLYHFDWTLPNEM 88
M L LL F P+E+
Sbjct: 430 MEMFLFFTALLQRFHLHFPHEL 451
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFL--ECSIDYKGNNFEYIPFGAGRRICPGISF 64
G+ V VN W + D K W P F+P+RFL + +ID K + + I FG G+R C G +
Sbjct: 377 GRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAID-KVLSEKVIIFGMGKRKCIGETI 435
Query: 65 ADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSVGIR 104
A + L L +LL ++++P +K +DMT + + ++
Sbjct: 436 ARWEVFLFLAILLQRVEFSVPLGVK---VDMTPIYGLTMK 472
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 20 DSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLLYH 79
D + +PE+F P+RF F ++PFG G R C G FA MKL L+
Sbjct: 352 DPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQ 411
Query: 80 FDWTLPNEMKHEDLDMTETFSVGIRTKDDMYI 111
FDWTL + ++L++ T S R KD++ +
Sbjct: 412 FDWTL---LPGQNLELVVTPSP--RPKDNLRV 438
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 6 PGKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFA 65
PG V V+ R W E F PDR+L+ + G F Y+PFGAGR C G +FA
Sbjct: 349 PGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDN-PASGEKFAYVPFGAGRHRCIGENFA 407
Query: 66 DAIMKL--SLVVLLYHFD 81
+K S ++ LY FD
Sbjct: 408 YVQIKTIWSTMLRLYEFD 425
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFE---YIPFGAGRRICPGIS 63
G +I N ++ +D W +P RF P+ FL D +G+ + ++PF AGRR C G
Sbjct: 370 GTTLITNLSSVLKDEAVWEKPFRFHPEHFL----DAQGHFVKPEAFLPFSAGRRACLGEP 425
Query: 64 FADAIMKLSLVVLLYHFDWTLP 85
A + L LL HF +++P
Sbjct: 426 LARMELFLFFTSLLQHFSFSVP 447
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGR----RICPGI 62
G V+++ + D + W P+ F P+RF E + N F+ IP G G CPG
Sbjct: 311 GTSVLLDLYGTNHDPRLWDHPDEFRPERFAE----REENLFDMIPQGGGHAEKGHRCPGE 366
Query: 63 SFADAIMKLSLVVLLYHFDWTLPNEMKHEDL 93
+MK SL L++ ++ +P + H L
Sbjct: 367 GITIEVMKASLDFLVHQIEYDVPEQSLHYSL 397
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFE---YIPFGAGRRICPGIS 63
G +I N ++ +D W +P RF P+ FL D +G+ + ++PF AGRR C G
Sbjct: 370 GTTLITNLSSVLKDEAVWEKPFRFHPEHFL----DAQGHFVKPEAFLPFSAGRRACLGEP 425
Query: 64 FADAIMKLSLVVLLYHFDWTLP 85
A + L LL HF +++P
Sbjct: 426 LARMELFLFFTSLLQHFSFSVP 447
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G ++ + ++ D+K + PE F P FL+ ++K +N+ ++PF AG+RIC G A
Sbjct: 367 GTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNY-FMPFSAGKRICVGEGLAR 425
Query: 67 AIMKLSLVVLLYHFDWTLPNEMKHEDLDMT 96
+ L L +L +F+ L + + +DLD T
Sbjct: 426 MELFLFLTFILQNFN--LKSLIDPKDLDTT 453
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G +I + ++ D K + P+ F P FL+ S ++K +++ ++PF AG+R+C G A
Sbjct: 363 GTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKRMCVGEGLAR 421
Query: 67 AIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFS--VGIRTKDDMYIIPTLYH 117
+ L L +L +F L + ++ +DLD+T + V + + IP +H
Sbjct: 422 MELFLFLTSILQNFK--LQSLVEPKDLDITAVVNGFVSVPPSYQLCFIPIHHH 472
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 20 DSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLLYH 79
D Y+ +P+ F PD FL+ + K +IPF G+RIC G A A + L +L +
Sbjct: 379 DPHYFEKPDAFNPDHFLDANGALKKTE-AFIPFSLGKRICLGEGIARAELFLFFTTILQN 437
Query: 80 FDWTLPNEMKHEDLDMT 96
F P + ED+D+T
Sbjct: 438 FSMASP--VAPEDIDLT 452
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 10 VIVNAWALGRDSKYWTEPERFIPDRFL--ECSIDYKGNNFEYIPFGAGRRICPGISFADA 67
V VN W + D + W +P F P+RFL + + K + + + FG G+R C G A
Sbjct: 383 VFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKW 442
Query: 68 IMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSVGIR 104
+ L L +LL ++++P +K +D+T + + ++
Sbjct: 443 EIFLFLAILLQQLEFSVPPGVK---VDLTPIYGLTMK 476
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G ++++ ++ D+K + PE F P FL+ ++K + + ++PF AG+RIC G + A
Sbjct: 367 GTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICVGEALAG 425
Query: 67 AIMKLSLVVLLYHFDWTLPNEMKHEDLDMT 96
+ L L +L +F+ L + + ++LD T
Sbjct: 426 MELFLFLTSILQNFN--LKSLVDPKNLDTT 453
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 6 PGK-PVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISF 64
PG P++ + + +GR Y+ +P F PDRF + + F Y PF G R C G F
Sbjct: 338 PGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPR---FTYFPFSLGHRSCIGQQF 394
Query: 65 ADAIMKLSLVVLLYHFDWTL 84
A +K+ + LL ++ L
Sbjct: 395 AQMEVKVVMAKLLQRLEFRL 414
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 45.8 bits (107), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPG 61
G V V ++LGR++ + PER+ P R+L+ I G NF ++PFG G R C G
Sbjct: 374 GTLVQVFLYSLGRNAALFPRPERYNPQRWLD--IRGSGRNFHHVPFGFGMRQCLG 426
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R CP
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACP 402
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 403 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 459
Query: 118 PSP 120
PSP
Sbjct: 460 PSP 462
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G ++++ ++ D+K + PE F P FL+ ++K + + ++PF AG+RIC G + A
Sbjct: 365 GTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICVGEALAG 423
Query: 67 AIMKLSLVVLLYHFDWTLPNEMKHEDLDMT 96
+ L L +L +F+ L + + ++LD T
Sbjct: 424 MELFLFLTSILQNFN--LKSLVDPKNLDTT 451
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 1 MDSTYPGKPVI-VNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRIC 59
D P K ++ V +A+GRD +++ P++F P R+L S D +F + FG G R C
Sbjct: 366 QDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWL--SKDKDLIHFRNLGFGWGVRQC 423
Query: 60 PGISFADAIMKLSLVVLLYHFDWTLPNEMKH 90
G A+ M L L+ +L +F EM+H
Sbjct: 424 VGRRIAELEMTLFLIHILENFK----VEMQH 450
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRI----CPGI 62
G+ V+++ + D+ W +P+ F P+RF + ++F +IP G G CPG
Sbjct: 301 GRQVVLDLYGSNHDAATWADPQEFRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGE 356
Query: 63 SFADAIMKLSLVVLLYHFDWTLPNE 87
AIMK++ +L+ + +P++
Sbjct: 357 WIVLAIMKVAAHLLVNAMRYDVPDQ 381
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRI----CPGI 62
G+ V+++ + D+ W +P+ F P+RF + ++F +IP G G CPG
Sbjct: 301 GRQVVLDLYGSNHDAATWADPQEFRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGE 356
Query: 63 SFADAIMKLSLVVLLYHFDWTLPNE 87
AIMK++ +L+ + +P++
Sbjct: 357 WIVLAIMKVAAHLLVNAMRYDVPDQ 381
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRI----CPGI 62
G+ V+++ + D+ W +P+ F P+RF + ++F +IP G G CPG
Sbjct: 301 GRQVVLDLYGSNHDAATWADPQEFRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGE 356
Query: 63 SFADAIMKLSLVVLLYHFDWTLPNE 87
AIMK++ +L+ + +P++
Sbjct: 357 WIVLAIMKVAAHLLVNAMRYDVPDQ 381
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRI----CPGI 62
G+ V+++ + D+ W +P+ F P+RF + ++F +IP G G CPG
Sbjct: 309 GRQVVLDLYGSNHDAATWADPQEFRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGE 364
Query: 63 SFADAIMKLSLVVLLYHFDWTLPNE 87
AIMK++ +L+ + +P++
Sbjct: 365 WIVLAIMKVAAHLLVNAMRYDVPDQ 389
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRI----CPGI 62
G+ V+++ + D+ W +P+ F P+RF + ++F +IP G G CPG
Sbjct: 309 GRQVVLDLYGSNHDAATWADPQEFRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGE 364
Query: 63 SFADAIMKLSLVVLLYHFDWTLPNE 87
AIMK++ +L+ + +P++
Sbjct: 365 WIVLAIMKVAAHLLVNAMRYDVPDQ 389
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRI----CPGI 62
G+ V+++ + D+ W +P+ F P+RF + ++F +IP G G CPG
Sbjct: 309 GRQVVLDLYGSNHDAATWADPQEFRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGE 364
Query: 63 SFADAIMKLSLVVLLYHFDWTLPNE 87
AIMK++ +L+ + +P++
Sbjct: 365 WIVLAIMKVAAHLLVNAMRYDVPDQ 389
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G VI N D W +P F PDRFLE G N + FG G R+C G S A
Sbjct: 380 GMVVIPNLQGAHLDETVWEQPHEFRPDRFLE-----PGANPSALAFGCGARVCLGESLAR 434
Query: 67 AIMKLSLVVLLYHFDWTLP 85
+ + L LL F P
Sbjct: 435 LELFVVLARLLQAFTLLPP 453
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G + +N LG + + +F P+R+L+ + K N F ++PFG G+R+C G A+
Sbjct: 380 GTVLTLNTQVLGSSEDNFEDSHKFRPERWLQ--KEKKINPFAHLPFGIGKRMCIGRRLAE 437
Query: 67 AIMKLSLVVLLYHFDWTL----PNEMKH 90
+ L+L ++ +D P EM H
Sbjct: 438 LQLHLALCWIIQKYDIVATDNEPVEMLH 465
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 20 DSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLLYH 79
D K + P F P FL+ + ++K +++ ++PF AG+RIC G A + L L +L +
Sbjct: 379 DDKEFPNPNIFDPGHFLDKNGNFKKSDY-FMPFSAGKRICAGEGLARMELFLFLTTILQN 437
Query: 80 FDWTLPNEMKHEDLDMTETFSVGIRTKDDMYIIPTLYH 117
F+ +++K+ + V + + IP +H
Sbjct: 438 FNLKSVDDLKNLNTTAVTKGIVSLPPSYQICFIPVHHH 475
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 43.1 bits (100), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 26 EPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLL--YHFDWT 83
+P F+P R+ + + N + +IPFGAGR C G +FA +K VLL Y F+
Sbjct: 361 DPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMA 420
Query: 84 LPNEMKHED 92
P E D
Sbjct: 421 QPPESYRND 429
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 26 EPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLL--YHFDWT 83
+P F+P R+ + + N + +IPFGAGR C G +FA +K VLL Y F+
Sbjct: 361 DPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMA 420
Query: 84 LPNEMKHED 92
P E D
Sbjct: 421 QPPESYRND 429
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 26 EPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLL--YHFDWT 83
+P F+P R+ + + N + +IPFGAGR C G +FA +K VLL Y F+
Sbjct: 361 DPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMA 420
Query: 84 LPNEMKHED 92
P E D
Sbjct: 421 QPPESYRND 429
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 26 EPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLL--YHFDWT 83
+P F+P R+ + + N + +IPFGAGR C G +FA +K VLL Y F+
Sbjct: 361 DPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMA 420
Query: 84 LPNEMKHED 92
P E D
Sbjct: 421 QPPESYRND 429
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 20 DSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLLYH 79
D++ + +PE+F P+ FL + +K +++ + PF G+R+C G A + L L +L H
Sbjct: 378 DNQEFPDPEKFKPEHFLNENGKFKYSDY-FKPFSTGKRVCAGEGLARMELFLLLCAILQH 436
Query: 80 FDWTLPNEMKHEDLDMTETFSVGIRTKDDMYIIPTLYH 117
F+ + K DL I + + +IP +H
Sbjct: 437 FNLKPLVDPKDIDLSPIHIGFGCIPPRYKLCVIPRSHH 474
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 42.4 bits (98), Expect = 6e-05, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACE 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 118 PSP 120
PSP
Sbjct: 459 PSP 461
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 42.4 bits (98), Expect = 6e-05, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 351 YPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 407
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 408 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 464
Query: 118 PSP 120
PSP
Sbjct: 465 PSP 467
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 42.0 bits (97), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 9 PVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAI 68
PV+ +A D +Y+ P F P FL+ + K N ++PF G+RIC G A
Sbjct: 371 PVLSSAL---HDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKRICAGEGIARTE 426
Query: 69 MKLSLVVLLYHFDWTLPNEMKHEDLDMT 96
+ L +L +F P + ED+D+T
Sbjct: 427 LFLFFTTILQNFSIASP--VPPEDIDLT 452
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 42.0 bits (97), Expect = 9e-05, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 348 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 404
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 405 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 461
Query: 118 PSP 120
PSP
Sbjct: 462 PSP 464
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 42.0 bits (97), Expect = 9e-05, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 348 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 404
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 405 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 461
Query: 118 PSP 120
PSP
Sbjct: 462 PSP 464
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 42.0 bits (97), Expect = 9e-05, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 118 PSP 120
PSP
Sbjct: 459 PSP 461
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 402 GKQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 118 PSP 120
PSP
Sbjct: 459 PSP 461
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 402
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 403 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 459
Query: 118 PSP 120
PSP
Sbjct: 460 PSP 462
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 2 DSTYPGKPVI-VNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
D P K ++ V +ALGR+ ++ +PE F P R+L S D F + FG G R C
Sbjct: 366 DYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWL--SKDKNITYFRNLGFGWGVRQCL 423
Query: 61 GISFADAIMKLSLVVLLYHF 80
G A+ M + L+ +L +F
Sbjct: 424 GRRIAELEMTIFLINMLENF 443
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 348 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 404
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 405 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 461
Query: 118 PSP 120
PSP
Sbjct: 462 PSP 464
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 118 PSP 120
PSP
Sbjct: 459 PSP 461
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 402
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 403 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 459
Query: 118 PSP 120
PSP
Sbjct: 460 PSP 462
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 118 PSP 120
PSP
Sbjct: 459 PSP 461
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 118 PSP 120
PSP
Sbjct: 459 PSP 461
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 118 PSP 120
PSP
Sbjct: 459 PSP 461
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 118 PSP 120
PSP
Sbjct: 459 PSP 461
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 118 PSP 120
PSP
Sbjct: 459 PSP 461
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 118 PSP 120
PSP
Sbjct: 459 PSP 461
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 402
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 403 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 459
Query: 118 PSP 120
PSP
Sbjct: 460 PSP 462
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 118 PSP 120
PSP
Sbjct: 459 PSP 461
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 118 PSP 120
PSP
Sbjct: 459 PSP 461
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 118 PSP 120
PSP
Sbjct: 459 PSP 461
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 402
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 403 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 459
Query: 118 PSP 120
PSP
Sbjct: 460 PSP 462
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 2 DSTYPGKPVI-VNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
D P K ++ V +ALGR+ ++ +PE F P R+L S D F + FG G R C
Sbjct: 363 DYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWL--SKDKNITYFRNLGFGWGVRQCL 420
Query: 61 GISFADAIMKLSLVVLLYHF 80
G A+ M + L+ +L +F
Sbjct: 421 GRRIAELEMTIFLINMLENF 440
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 118 PSP 120
PSP
Sbjct: 459 PSP 461
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 402
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET ++ G K IP
Sbjct: 403 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIEETLTLKPKGFVIKAKSKKIPLGGI 459
Query: 118 PSP 120
PSP
Sbjct: 460 PSP 462
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 9 PVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAI 68
PV+ +A D +Y+ P F P FL+ + K N ++PF G+RIC G A
Sbjct: 371 PVLSSAL---HDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKRICLGEGIARTE 426
Query: 69 MKLSLVVLLYHFDWTLPNEMKHEDLDMT 96
+ L +L +F P + ED+D+T
Sbjct: 427 LFLFFTTILQNFSIASP--VPPEDIDLT 452
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 9 PVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAI 68
PV+ +A D +Y+ P F P FL+ + K N ++PF G+RIC G A
Sbjct: 371 PVLSSAL---HDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKRICLGEGIARTE 426
Query: 69 MKLSLVVLLYHFDWTLPNEMKHEDLDMT 96
+ L +L +F P + ED+D+T
Sbjct: 427 LFLFFTTILQNFSIASP--VPPEDIDLT 452
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 9 PVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAI 68
PV+ +A D +Y+ P F P FL+ + K N ++PF G+RIC G A
Sbjct: 371 PVLSSAL---HDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKRICLGEGIARTE 426
Query: 69 MKLSLVVLLYHFDWTLPNEMKHEDLDMT 96
+ L +L +F P + ED+D+T
Sbjct: 427 LFLFFTTILQNFSIASP--VPPEDIDLT 452
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 41.2 bits (95), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G V+V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV 101
G FA L L ++L HFD+ + + +LD+ ET ++
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 41.2 bits (95), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 9 PVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAI 68
PV+ +A D +Y+ P F P FL+ + K N ++PF G+RIC G A
Sbjct: 371 PVLSSAL---HDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKRICLGEGIARTE 426
Query: 69 MKLSLVVLLYHFDWTLPNEMKHEDLDMT 96
+ L +L +F P + ED+D+T
Sbjct: 427 LFLFFTTILQNFSIASP--VPPEDIDLT 452
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 40.4 bits (93), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 19 RDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLLY 78
RD ++++ P F P FL+ +K ++ ++PF G+R C G A + L ++
Sbjct: 378 RDPRFFSNPRDFNPQHFLDKKGQFKKSD-AFVPFSIGKRYCFGEGLARMELFLFFTTIMQ 436
Query: 79 HFDWTLPNEMKHEDLDMTETFSVGIRTKDDMYIIPTLYH 117
+F + P K D+ I M +P +H
Sbjct: 437 NFRFKSPQSPKDIDVSPKHVGFATIPRNYTMSFLPRHHH 475
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 40.4 bits (93), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 402
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET + G K IP
Sbjct: 403 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLVLKPEGFVVKAKSKKIPLGGI 459
Query: 118 PSP 120
PSP
Sbjct: 460 PSP 462
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 40.4 bits (93), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET + G K IP
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLVLKPEGFVVKAKSKKIPLGGI 458
Query: 118 PSP 120
PSP
Sbjct: 459 PSP 461
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 40.0 bits (92), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET + G K IP
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLLLKPEGFVVKAKSKKIPLGGI 458
Query: 118 PSP 120
PSP
Sbjct: 459 PSP 461
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 40.0 bits (92), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 402
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV---GIRTKDDMYIIPTLYH 117
G FA L L ++L HFD+ + + +LD+ ET + G K IP
Sbjct: 403 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLLLKPEGFVVKAKSKKIPLGGI 459
Query: 118 PSP 120
PSP
Sbjct: 460 PSP 462
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 40.0 bits (92), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV 101
G FA L L ++L HFD+ + + +LD+ ET ++
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 40.0 bits (92), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV 101
G FA L L ++L HFD+ + + +LD+ ET ++
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 40.0 bits (92), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV 101
G FA L L ++L HFD+ + + +LD+ ET ++
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 40.0 bits (92), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV 101
G FA L L ++L HFD+ + + +LD+ ET ++
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 40.0 bits (92), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV 101
G FA L L ++L HFD+ + + +LD+ ET ++
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 40.0 bits (92), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV 101
G FA L L ++L HFD+ + + +LD+ ET ++
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 40.0 bits (92), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV 101
G FA L L ++L HFD+ + + +LD+ ET ++
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 39.7 bits (91), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 10 VIVNAWALGRDSKYWTEPERFIPDRFLECS-IDYKGNNFEYIPFGAGRRICPGISFADAI 68
V VN W++ D W PE F P RFL+ + K + F G+R C G +
Sbjct: 380 VFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQ 439
Query: 69 MKLSLVVLLYHFDWTL-PNE 87
+ L + +L + D+ PNE
Sbjct: 440 LFLFISILAHQCDFRANPNE 459
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 38.9 bits (89), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + PFG G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTET-------FSVGIRTKDDMYIIP 113
G FA L L ++L HFD+ + + +LD+ ET F V ++K IP
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETQLLKPEGFVVKAKSKK----IP 454
Query: 114 TLYHPSP 120
PSP
Sbjct: 455 LGGIPSP 461
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 38.9 bits (89), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 20 DSKYWTEPERFIPDRFLECSIDYKGN--------NFEYIPFGAGRRICPGISFADAIMKL 71
D + + +P F DR+L+ + K + Y+PFG+G ICPG FA +K
Sbjct: 380 DPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQ 439
Query: 72 SLVVLLYHFDWTL 84
L+++L +F+ L
Sbjct: 440 FLILMLSYFELEL 452
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 38.9 bits (89), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 20 DSKYWTEPERFIPDRFLECSIDYKGN--------NFEYIPFGAGRRICPGISFADAIMKL 71
D + + +P F DR+L+ + K + Y+PFG+G ICPG FA +K
Sbjct: 380 DPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQ 439
Query: 72 SLVVLLYHFDWTL 84
L+++L +F+ L
Sbjct: 440 FLILMLSYFELEL 452
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 38.5 bits (88), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + P+G G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPYGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV 101
G FA L L ++L HFD+ + + +LD+ ET ++
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 37.7 bits (86), Expect = 0.001, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + P+G G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPWGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV 101
G FA L L ++L HFD+ + + +LD+ ET ++
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + P G G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPHGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV 101
G FA L L ++L HFD+ + + +LD+ ET ++
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 36.6 bits (83), Expect = 0.003, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYI--PFGAGRRICPGISF 64
G +I + +A+ RD K + + F PDR+L + N +Y PF AG+R CP F
Sbjct: 359 GADIIYSPYAIQRDPKSYDDNLEFDPDRWLP---ERAANVPKYAMKPFSAGKRKCPSDHF 415
Query: 65 ADAIMKLSLVVLL--YHFD 81
+ A + L L Y F+
Sbjct: 416 SMAQLTLITAALATKYRFE 434
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 36.6 bits (83), Expect = 0.004, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 5 YP---GKPVIVNAWALGRDSKYWTEP-ERFIPDRFLECSIDYKGNNFEYIPFGAGRRICP 60
YP G ++V L RD W + E F P+RF S + + P G G+R C
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPAGNGQRACI 401
Query: 61 GISFADAIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSV 101
G FA L L ++L HFD+ + + +LD+ ET ++
Sbjct: 402 GQQFALHEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 35.8 bits (81), Expect = 0.006, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 2 DSTYPGKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPG 61
D PG ++++ + R ++ + E F P+RFLE G Y PFG G+R+C G
Sbjct: 284 DRLPPGTTLVLSPYVTQR--LHFPDGEAFRPERFLEERGTPSG---RYFPFGLGQRLCLG 338
Query: 62 ISFA 65
FA
Sbjct: 339 RDFA 342
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 35.4 bits (80), Expect = 0.008, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 19 RDSKYWTEPERFIPDRFLECSIDYKGNNFE--------YIPFGAGRRICPGISFADAIMK 70
RD + +T+PE F +RFL K + ++ +P+GAG C G S+A +K
Sbjct: 383 RDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIK 442
Query: 71 LSLVVLLYHFDWTLPN 86
+ ++L H D L N
Sbjct: 443 QFVFLVLVHLDLELIN 458
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 35.4 bits (80), Expect = 0.008, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 19 RDSKYWTEPERFIPDRFLECSIDYKGNNFE--------YIPFGAGRRICPGISFADAIMK 70
RD + +T+PE F +RFL K + ++ +P+GAG C G S+A +K
Sbjct: 371 RDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIK 430
Query: 71 LSLVVLLYHFDWTLPN 86
+ ++L H D L N
Sbjct: 431 QFVFLVLVHLDLELIN 446
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 35.0 bits (79), Expect = 0.010, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 19 RDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLLY 78
RD +++ P+ F P FL +K ++ ++PF G+R C G A + L ++
Sbjct: 378 RDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQ 436
Query: 79 HFDWTLPNEMKHEDLDMT 96
+F L + +D+D++
Sbjct: 437 NF--RLKSSQSPKDIDVS 452
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 35.0 bits (79), Expect = 0.010, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 19 RDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLLY 78
RD +++ P+ F P FL +K ++ ++PF G+R C G A + L ++
Sbjct: 378 RDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQ 436
Query: 79 HFDWTLPNEMKHEDLDMT 96
+F L + +D+D++
Sbjct: 437 NF--RLKSSQSPKDIDVS 452
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 35.0 bits (79), Expect = 0.010, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 19 RDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLLY 78
RD +++ P+ F P FL +K ++ ++PF G+R C G A + L ++
Sbjct: 378 RDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQ 436
Query: 79 HFDWTLPNEMKHEDLDMT 96
+F L + +D+D++
Sbjct: 437 NF--RLKSSQSPKDIDVS 452
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 35.0 bits (79), Expect = 0.010, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 19 RDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLLY 78
RD +++ P+ F P FL +K ++ ++PF G+R C G A + L ++
Sbjct: 378 RDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQ 436
Query: 79 HFDWTLPNEMKHEDLDMT 96
+F L + +D+D++
Sbjct: 437 NF--RLKSSQSPKDIDVS 452
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 35.0 bits (79), Expect = 0.010, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 19 RDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLLY 78
RD +++ P+ F P FL +K ++ ++PF G+R C G A + L ++
Sbjct: 378 RDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQ 436
Query: 79 HFDWTLPNEMKHEDLDMT 96
+F L + +D+D++
Sbjct: 437 NF--RLKSSQSPKDIDVS 452
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 34.7 bits (78), Expect = 0.014, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 23 YWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFA 65
Y+ E E F P+RFL G Y PFG G+R+C G FA
Sbjct: 303 YFPEGEAFQPERFLAERGTPSG---RYFPFGLGQRLCLGRDFA 342
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 32.7 bits (73), Expect = 0.046, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 20 DSKYWTEPERFIPDRFLECSIDYKGNNFE--------YIPFGAGRRICPGISFADAIMKL 71
D + +PE F DRFL K + F+ +P+G +CPG FA +K
Sbjct: 365 DPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKE 424
Query: 72 SLVVLLYHFDWTL 84
+ +L FD L
Sbjct: 425 LVFTILTRFDVEL 437
>pdb|2XFC|A Chain A, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Semliki Forest Virus Cryo-Em Map
pdb|2XFC|D Chain D, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Semliki Forest Virus Cryo-Em Map
pdb|2XFC|F Chain F, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Semliki Forest Virus Cryo-Em Map
pdb|2XFC|H Chain H, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Semliki Forest Virus Cryo-Em Map
Length = 439
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 12/70 (17%)
Query: 5 YPGKPVIVNAWALG------RDSKYWTEPERFIPDRFLECSIDYKGN--NFEYIPFGAGR 56
Y G + V A+A G +D+K+ P F + YKG+ N +Y PFGAGR
Sbjct: 137 YQGNNITVTAYANGDHAVTVKDAKFIVGPMSSAWTPFDNKIVVYKGDVYNMDYPPFGAGR 196
Query: 57 RICPGISFAD 66
PG F D
Sbjct: 197 ---PG-QFGD 202
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G +I+N + R +++ +P F + F + ++ Y+ + PFG G R C G A
Sbjct: 391 GTNIILNIGRMHR-LEFFPKPNEFTLENFAK-NVPYR----YFQPFGFGPRGCAGKYIAM 444
Query: 67 AIMKLSLVVLLYHF 80
+MK LV LL F
Sbjct: 445 VMMKAILVTLLRRF 458
>pdb|3N40|F Chain F, Crystal Structure Of The Immature Envelope Glycoprotein
Complex Of Chikungunya Virus
Length = 393
Score = 30.8 bits (68), Expect = 0.19, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 12/70 (17%)
Query: 5 YPGKPVIVNAWALG------RDSKYWTEPERFIPDRFLECSIDYKGN--NFEYIPFGAGR 56
Y G + V A+A G +D+K+ P F + YKG+ N +Y PFGAGR
Sbjct: 139 YQGNNITVTAYANGDHAVTVKDAKFIVGPMSSAWTPFDNKIVVYKGDVYNMDYPPFGAGR 198
Query: 57 RICPGISFAD 66
PG F D
Sbjct: 199 ---PG-QFGD 204
>pdb|2XFB|A Chain A, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Sindbis Virus Cryo-Em Map
pdb|2XFB|D Chain D, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Sindbis Virus Cryo-Em Map
pdb|2XFB|F Chain F, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Sindbis Virus Cryo-Em Map
pdb|2XFB|H Chain H, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Sindbis Virus Cryo-Em Map
Length = 391
Score = 30.8 bits (68), Expect = 0.21, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 12/70 (17%)
Query: 5 YPGKPVIVNAWALG------RDSKYWTEPERFIPDRFLECSIDYKGN--NFEYIPFGAGR 56
Y G + V A+A G +D+K+ P F + YKG+ N +Y PFGAGR
Sbjct: 137 YQGNNITVTAYANGDHAVTVKDAKFIVGPMSSAWTPFDNKIVVYKGDVYNMDYPPFGAGR 196
Query: 57 RICPGISFAD 66
PG F D
Sbjct: 197 ---PG-QFGD 202
>pdb|3N41|F Chain F, Crystal Structure Of The Mature Envelope Glycoprotein
Complex (Spontaneous Cleavage) Of Chikungunya Virus.
pdb|3N42|F Chain F, Crystal Structures Of The Mature Envelope Glycoprotein
Complex (Furin Cleavage) Of Chikungunya Virus.
pdb|3N43|F Chain F, Crystal Structures Of The Mature Envelope Glycoprotein
Complex (Trypsin Cleavage) Of Chikungunya Virus.
pdb|3N44|F Chain F, Crystal Structure Of The Mature Envelope Glycoprotein
Complex (Trypsin Cleavage; Osmium Soak) Of Chikungunya
Virus
Length = 473
Score = 30.4 bits (67), Expect = 0.25, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 12/70 (17%)
Query: 5 YPGKPVIVNAWALG------RDSKYWTEPERFIPDRFLECSIDYKGN--NFEYIPFGAGR 56
Y G + V A+A G +D+K+ P F + YKG+ N +Y PFGAGR
Sbjct: 159 YQGNNITVTAYANGDHAVTVKDAKFIVGPMSSAWTPFDNKIVVYKGDVYNMDYPPFGAGR 218
Query: 57 RICPGISFAD 66
PG F D
Sbjct: 219 ---PG-QFGD 224
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 30.4 bits (67), Expect = 0.27, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 13/99 (13%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G +++N A D + EP +F P R ++ FGAG C G+ A
Sbjct: 357 GDWLMLNYVAANHDPAQFPEPRKFDPTRPAN----------RHLAFGAGSHQCLGLHLAR 406
Query: 67 AIMKLSLVVLLYHFDWTLPNEMKHEDLDMTETFSVGIRT 105
M++ L VLL D E+ E + TF G ++
Sbjct: 407 LEMRVLLDVLLDRVDSL---ELAGEPKRVNSTFVGGFKS 442
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query: 7 GKPVIVNAWALGRDSK-YWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFA 65
G +IV+ ALGRD + + +RF R GN +I FG G +CPG + +
Sbjct: 311 GDALIVSYGALGRDERAHGPTADRFDLTR-------TSGN--RHISFGHGPHVCPGAALS 361
Query: 66 DAIMKLSLVVLLYHFDWTLPNEMKHEDLDM--TETFSVGIRTKDDMYIIP 113
++L L F H DL + E + + T++D++ +P
Sbjct: 362 RMEAGVALPALYARF--------PHLDLAVPAAELRNKPVVTQNDLFELP 403
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 28.9 bits (63), Expect = 0.81, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G PV+ A RD + +P+ F+P R K N +I FG G C G + A
Sbjct: 322 GTPVVAWLPAANRDPAEFDDPDTFLPGR--------KPN--RHITFGHGMHHCLGSALAR 371
Query: 67 AIMKLSLVVL 76
+ + L VL
Sbjct: 372 IELSVVLRVL 381
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 28.9 bits (63), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 11/74 (14%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G VIV + RD ++ EP+ F G ++ FG G +C G A
Sbjct: 254 GDQVIVYLGSANRDETFFDEPDLF-----------KIGRREMHLAFGIGIHMCLGAPLAR 302
Query: 67 AIMKLSLVVLLYHF 80
++L +L HF
Sbjct: 303 LEASIALNDILNHF 316
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 12/65 (18%)
Query: 11 IVNAW--ALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAI 68
+V W + RD + + +P+ FIPDR ++ FG+G +C G A
Sbjct: 277 LVRVWIASANRDEEVFKDPDSFIPDR----------TPNPHLSFGSGIHLCLGAPLARLE 326
Query: 69 MKLSL 73
+++L
Sbjct: 327 ARIAL 331
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 12/64 (18%)
Query: 12 VNAW--ALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIM 69
V W + RD + + + E+FIPDR N ++ FG+G +C G A
Sbjct: 278 VRVWIASANRDEEVFHDGEKFIPDR----------NPNPHLSFGSGIHLCLGAPLARLEA 327
Query: 70 KLSL 73
++++
Sbjct: 328 RIAI 331
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 12/64 (18%)
Query: 12 VNAW--ALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIM 69
V W + RD + + + E+FIPDR N ++ FG+G +C G A
Sbjct: 278 VRVWIASANRDEEVFHDGEKFIPDR----------NPNPHLSFGSGIHLCLGAPLARLEA 327
Query: 70 KLSL 73
++++
Sbjct: 328 RIAI 331
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 10/55 (18%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPG 61
G V V+ A RD + + +P+R ID++ + ++ FG G CPG
Sbjct: 311 GDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHVSFGFGPHYCPG 355
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 10/55 (18%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPG 61
G V V+ A RD + + +P+R ID++ + ++ FG G CPG
Sbjct: 311 GDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHVSFGFGPHYCPG 355
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 10/55 (18%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPG 61
G V V+ A RD + + +P+R ID++ + ++ FG G CPG
Sbjct: 311 GDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHVSFGFGPHYCPG 355
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 10/55 (18%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPG 61
G V V+ A RD + + +P+R ID++ + ++ FG G CPG
Sbjct: 311 GDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHVSFGFGPHYCPG 355
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 10/55 (18%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPG 61
G V V+ A RD + + +P+R ID++ + ++ FG G CPG
Sbjct: 311 GDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHVSFGFGPHYCPG 355
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 10/55 (18%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPG 61
G V V+ A RD + + +P+R ID++ + ++ FG G CPG
Sbjct: 311 GDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHVSFGFGPHYCPG 355
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 10/55 (18%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPG 61
G V V+ A RD + + +P+R ID++ + ++ FG G CPG
Sbjct: 311 GDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHVSFGFGPHYCPG 355
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 27.3 bits (59), Expect = 2.1, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G+PV+ + A RD + + +R DR +++ FG G C G A
Sbjct: 324 GEPVLASTGAANRDQAQFPDADRIDVDR----------TPNQHLGFGHGVHHCLGAPLAR 373
Query: 67 AIMKLSLVVLL 77
++++L VLL
Sbjct: 374 VELQVALEVLL 384
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 27.3 bits (59), Expect = 2.1, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G+PV+ + A RD + + +R DR +++ FG G C G A
Sbjct: 324 GEPVLASTGAANRDQAQFPDADRIDVDR----------TPNQHLGFGHGVHHCLGAPLAR 373
Query: 67 AIMKLSLVVLL 77
++++L VLL
Sbjct: 374 VELQVALEVLL 384
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 27.3 bits (59), Expect = 2.1, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G+PV+ + A RD + + +R DR +++ FG G C G A
Sbjct: 324 GEPVLASTGAANRDQAQFPDADRIDVDR----------TPNQHLGFGHGVHHCLGAPLAR 373
Query: 67 AIMKLSLVVLL 77
++++L VLL
Sbjct: 374 VELQVALEVLL 384
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 27.3 bits (59), Expect = 2.1, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 19 RDSKYWTEPERFIPDRFL---ECSIDYK--GNNFEYIPFGAGRRICPGISFADAIMKLSL 73
+D K + PE ++PDRF+ E + Y N E + C G F I +L +
Sbjct: 381 KDPKVFDRPEEYVPDRFVGDGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFV 440
Query: 74 VVLLYHFD 81
+ L +D
Sbjct: 441 IELFRRYD 448
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G+PV V+ A RD + +P+R ID + ++ +G G C G A
Sbjct: 314 GEPVYVSYLAANRDPDVFPDPDR----------IDLDRDPNPHLAYGNGHHFCTGAVLAR 363
Query: 67 AIMKLSLVVLL 77
+L + LL
Sbjct: 364 MQTELLVDTLL 374
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 7 GKPVIVNAWALGRDSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFAD 66
G+PV V+ A RD + +P+R ID + ++ +G G C G A
Sbjct: 314 GEPVYVSYLAANRDPDVFPDPDR----------IDLDRDPNPHLAYGNGHHFCTGAVLAR 363
Query: 67 AIMKLSLVVLL 77
+L + LL
Sbjct: 364 MQTELLVDTLL 374
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 26.6 bits (57), Expect = 4.0, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 20 DSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLLYH 79
D + + EP R+ P+R D K +I FGAG C G F +K L
Sbjct: 363 DEEAFPEPRRWDPER------DEKVEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRS 415
Query: 80 FDWTL 84
+D+ L
Sbjct: 416 YDFQL 420
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 26.6 bits (57), Expect = 4.0, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 20 DSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLLYH 79
D + + EP R+ P+R D K +I FGAG C G F +K L
Sbjct: 362 DEEAFPEPRRWDPER------DEKVEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRS 414
Query: 80 FDWTL 84
+D+ L
Sbjct: 415 YDFQL 419
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 26.2 bits (56), Expect = 4.4, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 20 DSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLLYH 79
D + + EP R+ P+R D K +I FGAG C G F +K L
Sbjct: 363 DEEAFPEPRRWDPER------DEKVEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRS 415
Query: 80 FDWTL 84
+D+ L
Sbjct: 416 YDFQL 420
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 26.2 bits (56), Expect = 4.4, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 20 DSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLLYH 79
D + + EP R+ P+R D K +I FGAG C G F +K L
Sbjct: 364 DEEAFPEPRRWDPER------DEKVEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRS 416
Query: 80 FDWTL 84
+D+ L
Sbjct: 417 YDFQL 421
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 20 DSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLLYH 79
D + + EP R+ P+R D K +I FGAG C G F +K L
Sbjct: 376 DEEAFPEPRRWDPER------DEKVEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRS 428
Query: 80 FDWTL 84
+D+ L
Sbjct: 429 YDFQL 433
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 26.2 bits (56), Expect = 4.7, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 20 DSKYWTEPERFIPDRFLECSIDYKGNNFEYIPFGAGRRICPGISFADAIMKLSLVVLLYH 79
D + + EP R+ P+R D K +I FGAG C G F +K L
Sbjct: 376 DEEAFPEPRRWDPER------DEKVEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRS 428
Query: 80 FDWTL 84
+D+ L
Sbjct: 429 YDFQL 433
>pdb|4G37|A Chain A, Structure Of Cross-Linked Firefly Luciferase In Second
Catalytic Conformation
pdb|4G37|B Chain B, Structure Of Cross-Linked Firefly Luciferase In Second
Catalytic Conformation
Length = 555
Score = 26.2 bits (56), Expect = 5.5, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 8/49 (16%)
Query: 3 STYPGKPVIVNA------WALGRDSKYWTEPER-FIPDRFLECSIDYKG 44
S Y P NA W D YW E E FI DR L+ I YKG
Sbjct: 404 SGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDR-LKSLIKYKG 451
>pdb|3IEP|A Chain A, Firefly Luciferase Apo Structure (P41 Form)
pdb|3IER|A Chain A, Firefly Luciferase Apo Structure (P41 Form) With Peg 400
Bound
pdb|3IES|A Chain A, Firefly Luciferase Inhibitor Complex
Length = 551
Score = 25.8 bits (55), Expect = 5.7, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 8/49 (16%)
Query: 3 STYPGKPVIVNA------WALGRDSKYWTEPER-FIPDRFLECSIDYKG 44
S Y P NA W D YW E E FI DR L+ I YKG
Sbjct: 399 SGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDR-LKSLIKYKG 446
>pdb|4G36|A Chain A, Photinus Pyralis Luciferase In The Adenylate-Forming
Conformation Bound To Dlsa
pdb|4G36|B Chain B, Photinus Pyralis Luciferase In The Adenylate-Forming
Conformation Bound To Dlsa
Length = 555
Score = 25.8 bits (55), Expect = 5.8, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 8/49 (16%)
Query: 3 STYPGKPVIVNA------WALGRDSKYWTEPER-FIPDRFLECSIDYKG 44
S Y P NA W D YW E E FI DR L+ I YKG
Sbjct: 404 SGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDR-LKSLIKYKG 451
>pdb|1BA3|A Chain A, Firefly Luciferase In Complex With Bromoform
pdb|1LCI|A Chain A, Firefly Luciferase
pdb|3RIX|A Chain A, 1.7a Resolution Structure Of A Firefly
Luciferase-Aspulvinone J Inhibitor Complex
pdb|4E5D|A Chain A, 2.2a Resolution Structure Of A Firefly
Luciferase-Benzothiazole Inhibitor Complex
Length = 550
Score = 25.8 bits (55), Expect = 5.8, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 8/49 (16%)
Query: 3 STYPGKPVIVNA------WALGRDSKYWTEPER-FIPDRFLECSIDYKG 44
S Y P NA W D YW E E FI DR L+ I YKG
Sbjct: 399 SGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDR-LKSLIKYKG 446
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.142 0.463
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,224,711
Number of Sequences: 62578
Number of extensions: 174408
Number of successful extensions: 473
Number of sequences better than 100.0: 136
Number of HSP's better than 100.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 352
Number of HSP's gapped (non-prelim): 136
length of query: 122
length of database: 14,973,337
effective HSP length: 84
effective length of query: 38
effective length of database: 9,716,785
effective search space: 369237830
effective search space used: 369237830
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)