BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042807
(343 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O94336|YHM3_SCHPO Uncharacterized FCP1 homology domain-containing protein C1271.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC1271.03c PE=4 SV=1
Length = 244
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 32/207 (15%)
Query: 125 KKLLVLDLNGLLADIVSPPPKDCKADKKIARHAVFK-------RPFCHDFLRFCFERFDV 177
+KL++LDLNG L C+A + +V++ RP H+FL++ F F V
Sbjct: 23 RKLVILDLNGTLL---------CRALAVRSEKSVYEASRNPIPRPGLHNFLKYIFANFSV 73
Query: 178 GVWSSRTQKNVERVVDFLMGDMKHK-LLFCWDLSYCTATSFKALENKY--KALVFKELRK 234
V+SS NV+ ++ +M + + K L+ CW T K ++++ K +K L
Sbjct: 74 MVFSSSKPHNVQAMLSAIMNEEQKKALIACW-----TRVDMKLTKHQFDRKVQTYKNLDT 128
Query: 235 VWEISDPNCPWAKGDYNESNTVLLDDSPYKALLNPPYTAI----FPCSYKYQNPSDNSLG 290
VWE + +++ NT+++DDS K + PY I F P D L
Sbjct: 129 VWEKIHHDSTGKPVSWSQYNTIIVDDSKTKCAAH-PYNHIAVSDFVAKSHSNIPKDIELA 187
Query: 291 AGGDLRVYLEMLAEAENVQRFIQHNPF 317
+ YL+ L NV +I PF
Sbjct: 188 C---VIRYLKHLKSVPNVSYYIYKFPF 211
>sp|Q6DI37|UBCP1_DANRE Ubiquitin-like domain-containing CTD phosphatase 1 OS=Danio rerio
GN=ublcp1 PE=2 SV=1
Length = 318
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 31/175 (17%)
Query: 103 REDNLSRISLS------SQFSAPISRLRKKLLVLDLNGLLADIVSPPPKDCKADKKIARH 156
RE+NL++I+ + + P R K+LLVLD++ L D K C H
Sbjct: 111 REENLAKIARRVKDYKVEELNPP--RPGKRLLVLDIDYTLFD-----HKSCAE----TGH 159
Query: 157 AVFKRPFCHDFLRFCFERFDVGVWSSRTQKNVERVVDFLMGDMKHKLLFCWDLSYCTATS 216
+ RPF H+FL +E FD+ +WS+ + K + D K K L D T
Sbjct: 160 ELM-RPFLHEFLTSAYEDFDIVIWSATSMKWI---------DAKMKELGVTDNPNYKITF 209
Query: 217 FKALENKYKALVFKELRKVWEISDPNCPWAKGD--YNESNTVLLDDSPYKALLNP 269
L++ V R V E+ W K YN NT++ DD L+NP
Sbjct: 210 M--LDSAAMITVHTPKRGVVEVKPLGVIWGKYSEFYNRKNTIMFDDIGRNFLMNP 262
>sp|Q28EX9|UBCP1_XENTR Ubiquitin-like domain-containing CTD phosphatase 1 OS=Xenopus
tropicalis GN=ublcp1 PE=2 SV=1
Length = 318
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 122 RLRKKLLVLDLNGLLADIVSPPPKDCKADKKIARHAVFKRPFCHDFLRFCFERFDVGVWS 181
R KKLLVLD++ L D + C + RP+ H+FL +E +D+ +WS
Sbjct: 134 REGKKLLVLDVDYTLFD-----HRSCAETGQ-----ELMRPYLHEFLTSAYEDYDIVIWS 183
Query: 182 SRTQKNVERVVDFLMGDMKHKLLFCWDLSYCTATSFK---ALENKYKALVFKELRKVWEI 238
+ + K +E MK +L T +++K L++ V R + ++
Sbjct: 184 ATSMKWIE-------AKMK-------ELGVSTNSNYKITFMLDSAAMITVHTPRRGLVDV 229
Query: 239 SDPNCPWAK-GD-YNESNTVLLDDSPYKALLNP 269
W K G+ YN++NT++ DD L+NP
Sbjct: 230 KPLGVIWGKYGEFYNKNNTIMFDDIGRNFLMNP 262
>sp|Q641F1|UBCP1_XENLA Ubiquitin-like domain-containing CTD phosphatase 1 OS=Xenopus
laevis GN=ublcp1 PE=2 SV=1
Length = 318
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 29/153 (18%)
Query: 122 RLRKKLLVLDLNGLLADIVSPPPKDCKADKKIARHAVFKRPFCHDFLRFCFERFDVGVWS 181
R KKLLVLD++ L D + C + RP+ H+FL +E +D+ +WS
Sbjct: 134 REGKKLLVLDVDYTLFD-----HRSCAETGQ-----ELMRPYLHEFLSSAYEDYDIVIWS 183
Query: 182 SRTQKNVERVVDFLMGDMKHKLLFCWDLSYCTATSFK---ALENKYKALVFKELRKVWEI 238
+ + K +E MK +L T ++K L++ V R + ++
Sbjct: 184 ATSMKWIE-------AKMK-------ELGVTTNANYKITFMLDSAAMITVHTPRRGLVDV 229
Query: 239 SDPNCPWAK-GD-YNESNTVLLDDSPYKALLNP 269
W K G+ Y+++NT++ DD L+NP
Sbjct: 230 KPLGVIWGKYGEFYSKNNTIMFDDIGRNFLMNP 262
>sp|Q5R4C4|UBCP1_PONAB Ubiquitin-like domain-containing CTD phosphatase 1 OS=Pongo abelii
GN=UBLCP1 PE=2 SV=1
Length = 318
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 31/154 (20%)
Query: 122 RLRKKLLVLDLNGLLADIVSPPPKDCKADKKIARHAV-FKRPFCHDFLRFCFERFDVGVW 180
R KKLLVLD++ L D + C A V RP+ H+FL +E +D+ +W
Sbjct: 134 REGKKLLVLDVDYTLFD-----HRSC------AETGVELMRPYLHEFLTSAYEDYDIVIW 182
Query: 181 SSRTQKNVERVVDFLMGDMKHKLLFCWDLSYCTATSFK---ALENKYKALVFKELRKVWE 237
S+ K +E MK +L T ++K L++ V R + +
Sbjct: 183 SATNMKWIE-------AKMK-------ELGVSTNANYKITFMLDSAAMITVHTPRRGLID 228
Query: 238 ISDPNCPWAKGD--YNESNTVLLDDSPYKALLNP 269
+ W K Y++ NT++ DD L+NP
Sbjct: 229 VKPLGVIWGKFSEFYSKKNTIMFDDIGRNFLMNP 262
>sp|Q8WVY7|UBCP1_HUMAN Ubiquitin-like domain-containing CTD phosphatase 1 OS=Homo sapiens
GN=UBLCP1 PE=1 SV=2
Length = 318
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 31/154 (20%)
Query: 122 RLRKKLLVLDLNGLLADIVSPPPKDCKADKKIARHAV-FKRPFCHDFLRFCFERFDVGVW 180
R KKLLVLD++ L D + C A V RP+ H+FL +E +D+ +W
Sbjct: 134 REGKKLLVLDVDYTLFD-----HRSC------AETGVELMRPYLHEFLTSAYEDYDIVIW 182
Query: 181 SSRTQKNVERVVDFLMGDMKHKLLFCWDLSYCTATSFK---ALENKYKALVFKELRKVWE 237
S+ K +E MK +L T ++K L++ V R + +
Sbjct: 183 SATNMKWIE-------AKMK-------ELGVSTNANYKITFMLDSAAMITVHTPRRGLID 228
Query: 238 ISDPNCPWAKGD--YNESNTVLLDDSPYKALLNP 269
+ W K Y++ NT++ DD L+NP
Sbjct: 229 VKPLGVIWGKFSEFYSKKNTIMFDDIGRNFLMNP 262
>sp|Q5ZJJ8|UBCP1_CHICK Ubiquitin-like domain-containing CTD phosphatase 1 OS=Gallus gallus
GN=UBLCP1 PE=2 SV=1
Length = 318
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 31/154 (20%)
Query: 122 RLRKKLLVLDLNGLLADIVSPPPKDCKADKKIARHAV-FKRPFCHDFLRFCFERFDVGVW 180
R KKLLVLD++ L D + C A V RP+ H+FL +E +D+ +W
Sbjct: 134 REGKKLLVLDVDYTLFD-----HRSC------AETGVELMRPYLHEFLTSAYEDYDIVIW 182
Query: 181 SSRTQKNVERVVDFLMGDMKHKLLFCWDLSYCTATSFK---ALENKYKALVFKELRKVWE 237
S+ K +E MK +L T ++K L++ V R + +
Sbjct: 183 SATNMKWIE-------AKMK-------ELGVSTNANYKITFMLDSAAMITVHTPRRGLID 228
Query: 238 ISDPNCPWAKGD--YNESNTVLLDDSPYKALLNP 269
+ W K Y++ NT++ DD L+NP
Sbjct: 229 VKPLGVIWGKFSEYYSKKNTIMFDDIGRNFLMNP 262
>sp|Q2KJD7|UBCP1_BOVIN Ubiquitin-like domain-containing CTD phosphatase 1 OS=Bos taurus
GN=UBLCP1 PE=2 SV=1
Length = 318
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 31/154 (20%)
Query: 122 RLRKKLLVLDLNGLLADIVSPPPKDCKADKKIARHAV-FKRPFCHDFLRFCFERFDVGVW 180
R KKLLVLD++ L D + C A V RP+ H+FL +E +D+ +W
Sbjct: 134 REGKKLLVLDVDYTLFD-----HRSC------AETGVELMRPYLHEFLTSAYEDYDIVIW 182
Query: 181 SSRTQKNVERVVDFLMGDMKHKLLFCWDLSYCTATSFK---ALENKYKALVFKELRKVWE 237
S+ K +E MK +L T ++K L++ V R + +
Sbjct: 183 SATNMKWIE-------AKMK-------ELGVSTNANYKITFMLDSAAMITVHTPRRGLID 228
Query: 238 ISDPNCPWAKGD--YNESNTVLLDDSPYKALLNP 269
+ W K Y++ NT++ DD L+NP
Sbjct: 229 VKPLGVIWGKFSEFYSKKNTIMFDDIGRNFLMNP 262
>sp|Q5FWT7|UBCP1_RAT Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus
norvegicus GN=Ublcp1 PE=2 SV=1
Length = 318
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 31/154 (20%)
Query: 122 RLRKKLLVLDLNGLLADIVSPPPKDCKADKKIARHAV-FKRPFCHDFLRFCFERFDVGVW 180
R KKLLVLD++ L D + C A V RP+ H+FL +E +D+ +W
Sbjct: 134 REGKKLLVLDVDYTLFD-----HRSC------AETGVELMRPYLHEFLTSAYEDYDIVIW 182
Query: 181 SSRTQKNVERVVDFLMGDMKHKLLFCWDLSYCTATSFK---ALENKYKALVFKELRKVWE 237
S+ K +E MK +L T ++K L++ V R + +
Sbjct: 183 SATNMKWIE-------AKMK-------ELGVSTNANYKITFMLDSAAMITVHTPRRGLID 228
Query: 238 ISDPNCPWAKGD--YNESNTVLLDDSPYKALLNP 269
+ W K Y++ NT++ DD L+NP
Sbjct: 229 VKPLGVIWGKFSEFYSKKNTIMFDDIGRNFLMNP 262
>sp|Q8BGR9|UBCP1_MOUSE Ubiquitin-like domain-containing CTD phosphatase 1 OS=Mus musculus
GN=Ublcp1 PE=1 SV=1
Length = 318
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 31/154 (20%)
Query: 122 RLRKKLLVLDLNGLLADIVSPPPKDCKADKKIARHAV-FKRPFCHDFLRFCFERFDVGVW 180
R KKLLVLD++ L D + C A V RP+ H+FL +E +D+ +W
Sbjct: 134 REGKKLLVLDVDYTLFD-----HRSC------AETGVELMRPYLHEFLTSAYEDYDIVIW 182
Query: 181 SSRTQKNVERVVDFLMGDMKHKLLFCWDLSYCTATSFK---ALENKYKALVFKELRKVWE 237
S+ K +E MK +L T ++K L++ V R + +
Sbjct: 183 SATNMKWIE-------AKMK-------ELGVSTNANYKITFMLDSAAMITVHTPRRGLID 228
Query: 238 ISDPNCPWAKGD--YNESNTVLLDDSPYKALLNP 269
+ W K Y++ NT++ DD L+NP
Sbjct: 229 VKPLGVIWGKFSEFYSKKNTIMFDDIGRNFLMNP 262
>sp|Q9XYL0|CTDS_DICDI Probable C-terminal domain small phosphatase OS=Dictyostelium
discoideum GN=fcpA PE=3 SV=1
Length = 306
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 126 KLLVLDLNGLLA----------DIVSPPPKDCKADKKIARHAVFKRPFCHDFLRFCFERF 175
K LVLDL+ L D + P + + I + V KRPF DFLR E+F
Sbjct: 137 KTLVLDLDETLVHSSFKPVHNPDFIVP----VEIEGTIHQVYVVKRPFVDDFLRAIAEKF 192
Query: 176 DVGVWSSRTQKNVERVVDFL-MGDMKHKLLF 205
++ V+++ K + V+DFL G + H LF
Sbjct: 193 EIVVFTASLAKYADPVLDFLDTGRVIHYRLF 223
>sp|Q8W3M6|UBCP_ARATH Ubiquitin-like domain-containing CTD phosphatase OS=Arabidopsis
thaliana GN=At4g06599 PE=2 SV=1
Length = 340
Score = 38.9 bits (89), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 29/153 (18%)
Query: 122 RLRKKLLVLDLNGLLADIVSPPPKDCKADKKIARHAVFKRPFCHDFLRFCFERFDVGVWS 181
R KKLLVLD++ L D S + RP+ H+FL + +D+ +WS
Sbjct: 152 RQGKKLLVLDIDYTLFDHRSTAENPLQ----------LMRPYLHEFLTAAYAEYDIMIWS 201
Query: 182 SRTQKNVERVVDFLMGDMKHKLLFCWDLSYCTATSFKA---LENKYKALVFKELRKVWEI 238
+ + K VE L +L ++K L++ V + R +++
Sbjct: 202 ATSMKWVE--------------LKMTELGVLNNPNYKVTALLDHLAMITVQSDTRGIFDC 247
Query: 239 SDPNCPWA--KGDYNESNTVLLDDSPYKALLNP 269
WA YN NT++ DD ++NP
Sbjct: 248 KPLGLIWALLPEFYNPGNTIMFDDLRRNFVMNP 280
>sp|Q196V6|VF355_IIV3 Putative CTD phosphatase-like protein 355R OS=Invertebrate
iridescent virus 3 GN=IIV3-104L PE=3 SV=1
Length = 186
Score = 38.5 bits (88), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 11/73 (15%)
Query: 124 RKKLLVLDLNGLLA-----DIVSPPPKDCKADKKIAR------HAVFKRPFCHDFLRFCF 172
+KKL++LDL+ L D V + +A K+ + +F+RP +FL + F
Sbjct: 5 KKKLILLDLDNTLICAEDLDTVKDKKRLSQAQKQFRTVRMEDYYDIFERPHLQEFLDYLF 64
Query: 173 ERFDVGVWSSRTQ 185
+ F VGVW++ ++
Sbjct: 65 KNFKVGVWTASSK 77
>sp|Q07949|PSR2_YEAST Probable phosphatase PSR2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PSR2 PE=1 SV=1
Length = 397
Score = 35.8 bits (81), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 44/178 (24%)
Query: 124 RKKLLVLDLNGLL----------ADIVSPPPKDCKADKKIARHAVFKRPFCHDFLRFCFE 173
+KK L+LDL+ L AD V P + D ++ V KRP +FL +
Sbjct: 226 QKKCLILDLDETLVHSSFKYMHSADFVLP----VEIDDQVHNVYVIKRPGVDEFLNRVSQ 281
Query: 174 RFDVGVWSSRTQKNVERVVDFL--MGDMKHKLLFCWDLSYCTATSFKALENKYKALVFKE 231
++V V+++ + ++D L G + H+L F+ Y+ K
Sbjct: 282 LYEVVVFTASVSRYANPLLDTLDPNGTIHHRL-------------FREACYNYEGNYIKN 328
Query: 232 LRKVWEISDPNCPWAKGDYNESNTVLLDDSPYKALLNPPYTAIFPCSYKYQNPSDNSL 289
L ++ P S T++LD+SP + +P + P S + + DN L
Sbjct: 329 LSQIGR------PL-------SETIILDNSPASYIFHPQHAV--PISSWFSDTHDNEL 371
>sp|Q5IS74|TPP1_PANTR Tripeptidyl-peptidase 1 OS=Pan troglodytes GN=TPP1 PE=2 SV=1
Length = 563
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 76 PDEKYTAEK--VISSEADETQDATLTFSYREDNLSRIS-LSSQFSAPISRLRKKLLVLDL 132
PD++ T V AD ++ +LTF+ R+ N+ R+S L S P S K L L+
Sbjct: 25 PDQRRTLPPGWVSLGRADPEEELSLTFALRQQNVERLSELVQAVSDPSSPQYGKYLTLE- 83
Query: 133 NGLLADIVSPPPKDCKADKKIARHAVFKRPFCHDFL 168
+AD+V P P + +K A ++ CH +
Sbjct: 84 --NVADLVRPSPLTLRTVQKWLLAAGARK--CHSVI 115
>sp|Q6CYA2|SYF1_KLULA Pre-mRNA-splicing factor SYF1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=SYF1 PE=3 SV=1
Length = 798
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 252 ESNTVLLDDS---PYKALLNPPYTAIFPCSYKYQNPSDNSLGAGGDLRVYLEMLAEAENV 308
E + VLLD + P+K L++ ++ C Y+ + D+++ L V LE+ E +
Sbjct: 427 EKSEVLLDKATNVPFKFLVDLENVWLYWCEYRLKRSIDDAIKV---LSVVLEIPDNHELL 483
Query: 309 -QRFIQHNPFGQSAITNRSEYWAFYL 333
Q+F + Q+AI + WA YL
Sbjct: 484 LQKFEKGESPAQAAIFSSKRLWAMYL 509
>sp|P35194|UTP20_YEAST U3 small nucleolar RNA-associated protein 20 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UTP20 PE=1
SV=3
Length = 2493
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 12/66 (18%)
Query: 142 PPPKDCKADKKIARHAV---FKRPFCHDFLRFCFERFDVGVW---------SSRTQKNVE 189
PP K +KIA +V FK+P+ +DFL ER D + S T K +
Sbjct: 936 PPTSGQKRSRKIAVISVLPNFKKPYINDFLSLASERLDYNYFFGNSHQINSSKATLKTIR 995
Query: 190 RVVDFL 195
R+ F+
Sbjct: 996 RMTGFV 1001
>sp|Q60HH1|TPP1_MACFA Tripeptidyl-peptidase 1 OS=Macaca fascicularis GN=TPP1 PE=2 SV=2
Length = 563
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 76 PDEKYTAEK--VISSEADETQDATLTFSYREDNLSRIS-LSSQFSAPISRLRKKLLVLDL 132
PD++ T V AD ++ +LTF+ R+ NL R+S L S P S K L L+
Sbjct: 25 PDQRRTLPPGWVSLGRADPEEELSLTFALRQQNLERLSELVQAVSDPNSPQYGKYLTLE- 83
Query: 133 NGLLADIVSPPPKDCKADKKIARHAVFKRPFCHDFL 168
+AD+V P P +K A ++ CH +
Sbjct: 84 --NVADLVRPSPLTLHMVQKWLLAAGAQK--CHSVI 115
>sp|E1BW58|MIEAP_CHICK Mitochondria-eating protein OS=Gallus gallus GN=SPATA18 PE=3 SV=1
Length = 479
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 13/130 (10%)
Query: 33 GVEIKNRMEKLNQLKTIPANELHEDVRLPKM----VQKNNNMSTLSLPDEKYTAEKVISS 88
E + ++ +L +T+ +L E++ ++ VQ++ + L+L D K + +
Sbjct: 105 STETERKLRQLATSQTLQLQDLQEELTSTRLELNHVQQDLAQTQLALEDTKTQLATTLLT 164
Query: 89 EADETQD--ATLTFS--YREDNLSRISLSSQFSAPISRLRKKLLVLD-----LNGLLADI 139
ADE A L S ED+L R+ + I RLR +L +LD L +A
Sbjct: 165 AADEIIQLRAVLKASRAQEEDSLRRLDHLNDCEQQIERLRDELSILDAQKSVLQSRIARS 224
Query: 140 VSPPPKDCKA 149
SP P+ ++
Sbjct: 225 RSPSPRRIRS 234
>sp|Q5RFL1|TPP1_PONAB Tripeptidyl-peptidase 1 OS=Pongo abelii GN=TPP1 PE=2 SV=1
Length = 564
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 76 PDEKYTAEK--VISSEADETQDATLTFSYREDNLSRIS-LSSQFSAPISRLRKKLLVLDL 132
PD++ T V AD ++ +LTF+ R+ N+ R+S L S P S K L L+
Sbjct: 25 PDQRRTLPPGWVSLGRADPEEELSLTFALRQQNVERLSELVQAVSDPSSPQYGKYLTLE- 83
Query: 133 NGLLADIVSPPPKDCKADKKIARHAVFKRPFCHDFL 168
+AD+V P P +K A ++ CH +
Sbjct: 84 --NVADLVRPSPLTLHTVQKWLLAAGAQK--CHSVI 115
>sp|O14773|TPP1_HUMAN Tripeptidyl-peptidase 1 OS=Homo sapiens GN=TPP1 PE=1 SV=2
Length = 563
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 76 PDEKYTAEK--VISSEADETQDATLTFSYREDNLSRIS-LSSQFSAPISRLRKKLLVLDL 132
PD++ T V AD ++ +LTF+ R+ N+ R+S L S P S K L L+
Sbjct: 25 PDQRRTLPPGWVSLGRADPEEELSLTFALRQQNVERLSELVQAVSDPSSPQYGKYLTLE- 83
Query: 133 NGLLADIVSPPPKDCKADKKIARHAVFKRPFCHDFL 168
+AD+V P P +K A ++ CH +
Sbjct: 84 --NVADLVRPSPLTLHTVQKWLLAAGAQK--CHSVI 115
>sp|Q91FG9|VF355_IIV6 Putative CTD phosphatase-like protein 355R OS=Invertebrate
iridescent virus 6 GN=IIV6-355R PE=3 SV=1
Length = 182
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 161 RPFCHDFLRFCFERFDVGVWSSRTQKNVERVVD--FLMGDMKHKLLFCWDLSYCTATSFK 218
RP+ FL + F+ F+V +W++ ++ +++ L D K+ +C + K
Sbjct: 48 RPYLQPFLDYLFKNFNVHIWTAASKGYASFIIEEFILKKDPSRKINLVLFDHHCRVS--K 105
Query: 219 ALENKYKALVFKELRKVWEISDPNCPWAKGDYNESNTVLLDD 260
+ K KA K+L +W I W ++++ NT ++DD
Sbjct: 106 RVYKKEKAS--KKLEMLWTI------WKLQEFDKENTFIIDD 139
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,144,989
Number of Sequences: 539616
Number of extensions: 4957758
Number of successful extensions: 11104
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 11072
Number of HSP's gapped (non-prelim): 36
length of query: 343
length of database: 191,569,459
effective HSP length: 118
effective length of query: 225
effective length of database: 127,894,771
effective search space: 28776323475
effective search space used: 28776323475
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)